CPU03_RS01155 bcc8776c19a918dcc83222623b3d5dfd 92 Pfam PF07023 Protein of unknown function (DUF1315) 5 81 6.7E-25 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 CPU03_RS07455 face598b23b40f0019e0a92a2821d806 293 SUPERFAMILY SSF53448 1 286 4.73E-89 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07455 face598b23b40f0019e0a92a2821d806 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 6.3E-156 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CPU03_RS07455 face598b23b40f0019e0a92a2821d806 293 Pfam PF00483 Nucleotidyl transferase 2 238 5.0E-69 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS07455 face598b23b40f0019e0a92a2821d806 293 Gene3D G3DSA:3.90.550.10 1 292 9.5E-68 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 Pfam PF01467 Cytidylyltransferase-like 6 134 3.1E-24 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 Gene3D G3DSA:3.40.50.620 1 159 2.7E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.144 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 SUPERFAMILY SSF52374 1 154 4.02E-45 T 29-03-2018 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 8.4E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 8.4E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 8.4E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 8.4E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 8.4E-53 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 2.5E-60 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CPU03_RS07645 34e7d6436a2147b7468f27bbf4d4f905 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 2.2E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 SUPERFAMILY SSF54570 3 84 1.96E-34 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.3E-45 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.9E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.9E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.9E-24 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.188 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 Pfam PF00203 Ribosomal protein S19 3 83 6.9E-35 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 Gene3D G3DSA:3.30.860.10 1 92 3.9E-39 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09400 ec84e3d6bafc793d2c533f6fae250fc3 92 PIRSF PIRSF002144 1 92 8.9E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS10755 9526d1eca387d11949d4eb7597cef30b 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 2.9E-96 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS10755 9526d1eca387d11949d4eb7597cef30b 308 PIRSF PIRSF026649 2 306 2.1E-97 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS10755 9526d1eca387d11949d4eb7597cef30b 308 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 64.521 T 29-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 CPU03_RS10755 9526d1eca387d11949d4eb7597cef30b 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.5E-130 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CPU03_RS10755 9526d1eca387d11949d4eb7597cef30b 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 49.127 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 ProSitePatterns PS00321 recA signature. 213 221 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 SUPERFAMILY SSF52540 4 267 3.91E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 Hamap MF_00268 Protein RecA [recA]. 5 329 50.806 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 297 314 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 93 122 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 210 238 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 243 272 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 165 194 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 PRINTS PR00142 RecA protein signature 127 156 7.3E-84 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 Pfam PF00154 recA bacterial DNA recombination protein 7 268 3.6E-144 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 SUPERFAMILY SSF54752 268 324 1.16E-19 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 Gene3D G3DSA:3.30.250.10 269 326 3.2E-23 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 Gene3D G3DSA:3.40.50.300 26 268 1.2E-45 T 29-03-2018 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.7E-170 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CPU03_RS11025 515138c6c835bd16c19c89be66a06897 353 SMART SM00382 57 228 1.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 SUPERFAMILY SSF50249 4 181 6.51E-57 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 Gene3D G3DSA:2.40.50.140 1 119 3.2E-44 T 29-03-2018 CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 Pfam PF00436 Single-strand binding protein family 6 111 3.0E-40 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 PIRSF PIRSF002070 3 160 1.2E-39 T 29-03-2018 CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 37.938 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS17240 0b26feb507bb00039fc6b2f4d365fd47 181 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 181 7.4E-56 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS15030 5ffefcc19f3d2d9c6136b8745e0712e8 212 SUPERFAMILY SSF63965 9 210 6.8E-61 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CPU03_RS15030 5ffefcc19f3d2d9c6136b8745e0712e8 212 Pfam PF02570 Precorrin-8X methylmutase 10 206 9.2E-63 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CPU03_RS15030 5ffefcc19f3d2d9c6136b8745e0712e8 212 Gene3D G3DSA:3.40.50.10230 3 212 2.6E-72 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 SUPERFAMILY SSF53720 2 412 4.45E-110 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 PIRSF PIRSF000151 1 417 1.6E-168 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 2.6E-178 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 Pfam PF00171 Aldehyde dehydrogenase family 3 278 1.1E-10 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 Gene3D G3DSA:3.40.605.10 1 236 2.1E-39 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 40.182 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS03900 1f04a7eed82fcad23a106e580230b6c8 417 Gene3D G3DSA:3.40.605.10 237 417 1.6E-35 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS10275 2a817ff18aecfe20ad074d5fd0aed0ef 332 Pfam PF13407 Periplasmic binding protein domain 46 293 8.0E-28 T 29-03-2018 IPR025997 Periplasmic binding protein CPU03_RS10275 2a817ff18aecfe20ad074d5fd0aed0ef 332 Gene3D G3DSA:3.40.50.2300 157 299 1.8E-14 T 29-03-2018 CPU03_RS10275 2a817ff18aecfe20ad074d5fd0aed0ef 332 SUPERFAMILY SSF53822 46 320 7.07E-35 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS10275 2a817ff18aecfe20ad074d5fd0aed0ef 332 Gene3D G3DSA:3.40.50.2300 41 156 5.5E-14 T 29-03-2018 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.3E-38 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 Gene3D G3DSA:3.30.70.60 1 100 9.2E-31 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 SUPERFAMILY SSF54995 1 103 9.16E-38 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.509 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS06220 b462655df954e1fb1319e4b56fa0c6a8 131 Pfam PF01250 Ribosomal protein S6 3 91 5.8E-28 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS02745 94518c457917e583d9061217d301691e 306 SUPERFAMILY SSF102886 6 301 3.53E-135 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 4.4E-130 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 56.178 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PIRSF PIRSF000166 3 302 1.6E-125 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 Gene3D G3DSA:3.40.1500.10 2 301 3.5E-137 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 233 260 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 30 46 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 261 287 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 47 68 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 89 113 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 161 190 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 PRINTS PR00073 Coprogen oxidase signature 124 146 9.4E-84 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS02745 94518c457917e583d9061217d301691e 306 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 292 461 3.5E-33 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 462 534 1.9E-11 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Gene3D G3DSA:1.10.645.10 375 533 2.6E-32 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Gene3D G3DSA:1.10.645.10 173 358 3.4E-44 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 SUPERFAMILY SSF143243 8 191 2.88E-43 T 29-03-2018 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 213 224 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 86 131 1.0E-16 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 35 151 7.1E-24 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 SUPERFAMILY SSF56762 190 534 2.88E-107 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10865 23f00e472d886c507a0d35f12d506ba2 566 Pfam PF00374 Nickel-dependent hydrogenase 215 283 1.4E-12 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CPU03_RS12095 e453cea2c69c2620aeadd861c17f5c6f 442 SUPERFAMILY SSF103473 6 431 2.88E-78 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS12095 e453cea2c69c2620aeadd861c17f5c6f 442 Gene3D G3DSA:1.20.1250.20 9 210 1.1E-31 T 29-03-2018 CPU03_RS12095 e453cea2c69c2620aeadd861c17f5c6f 442 Pfam PF00083 Sugar (and other) transporter 53 435 2.1E-57 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CPU03_RS12095 e453cea2c69c2620aeadd861c17f5c6f 442 Gene3D G3DSA:1.20.1250.20 223 441 1.2E-34 T 29-03-2018 CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 SUPERFAMILY SSF52540 1 341 8.75E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.8E-38 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 Gene3D G3DSA:3.40.50.300 1 357 9.1E-29 T 29-03-2018 CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 358 96.693 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CPU03_RS08215 b33b4ce7bbc7875f579ef2d30cf07f0a 358 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.4E-128 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 4.5E-182 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 Gene3D G3DSA:3.90.1150.10 190 262 0.0011 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 Gene3D G3DSA:3.90.1150.10 263 423 6.2E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 Pfam PF00202 Aminotransferase class-III 26 421 4.2E-127 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.564 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 PIRSF PIRSF000521 29 371 1.9E-26 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 SUPERFAMILY SSF53383 1 422 5.49E-134 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS12710 04ca88407dbc03b5dcdfac6ef65b5b7e 433 Gene3D G3DSA:3.90.1150.10 3 173 3.1E-46 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Gene3D G3DSA:2.130.10.150 248 429 8.7E-35 T 29-03-2018 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Gene3D G3DSA:2.130.10.150 165 247 4.6E-7 T 29-03-2018 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 SUPERFAMILY SSF69304 155 428 3.92E-55 T 29-03-2018 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Gene3D G3DSA:3.40.50.10070 22 164 3.4E-38 T 29-03-2018 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Pfam PF07676 WD40-like Beta Propeller Repeat 203 223 0.0013 T 29-03-2018 IPR011659 WD40-like Beta Propeller CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 3.0E-9 T 29-03-2018 IPR011659 WD40-like Beta Propeller CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 6.8E-11 T 29-03-2018 IPR011659 WD40-like Beta Propeller CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Pfam PF07676 WD40-like Beta Propeller Repeat 368 398 0.0028 T 29-03-2018 IPR011659 WD40-like Beta Propeller CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.71 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 2.5E-159 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 SUPERFAMILY SSF52964 28 161 2.75E-41 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CPU03_RS12590 f81d049d474ef416a6032118c2a08016 430 Pfam PF04052 TolB amino-terminal domain 23 122 3.3E-32 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CPU03_RS03155 4856b61847812526c369ad5341312c3e 356 Gene3D G3DSA:2.60.40.1090 42 179 0.54 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS03155 4856b61847812526c369ad5341312c3e 356 Gene3D G3DSA:2.60.40.1090 219 356 6.9E-14 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS03155 4856b61847812526c369ad5341312c3e 356 SUPERFAMILY SSF49401 226 355 1.69E-11 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS03155 4856b61847812526c369ad5341312c3e 356 Pfam PF00419 Fimbrial protein 200 356 1.6E-21 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS00680 410c8c854240d79a8f69491b8ae195af 206 Pfam PF00005 ABC transporter 19 150 4.9E-15 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS00680 410c8c854240d79a8f69491b8ae195af 206 SMART SM00382 26 205 9.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS00680 410c8c854240d79a8f69491b8ae195af 206 Gene3D G3DSA:3.40.50.300 1 200 1.8E-36 T 29-03-2018 CPU03_RS00680 410c8c854240d79a8f69491b8ae195af 206 SUPERFAMILY SSF52540 2 193 5.01E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00680 410c8c854240d79a8f69491b8ae195af 206 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Gene3D G3DSA:2.30.38.10 526 612 1.2E-14 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 SUPERFAMILY SSF56801 221 713 1.14E-95 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Gene3D G3DSA:3.30.300.30 617 715 9.7E-9 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Gene3D G3DSA:3.40.50.980 206 375 9.6E-20 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 SMART SM00563 30 140 3.7E-25 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 SUPERFAMILY SSF69593 9 142 3.01E-17 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Gene3D G3DSA:3.40.50.980 376 525 9.6E-45 T 29-03-2018 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Pfam PF00501 AMP-binding enzyme 233 619 5.5E-65 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Pfam PF01553 Acyltransferase 28 137 2.2E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS10895 7a9c2b2642f2ad97eefd761d3e12da7a 722 Gene3D G3DSA:3.40.1130.10 11 205 4.4E-18 T 29-03-2018 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Gene3D G3DSA:3.30.930.10 11 460 1.4E-103 T 29-03-2018 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.5E-22 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.9E-49 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Gene3D G3DSA:3.40.50.800 461 572 4.8E-32 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 SUPERFAMILY SSF52954 463 569 3.93E-33 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 PIRSF PIRSF001535 1 572 4.2E-276 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 SUPERFAMILY SSF55826 218 390 1.96E-29 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 2.5E-271 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.953 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 SUPERFAMILY SSF55681 407 478 8.36E-109 T 29-03-2018 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 SUPERFAMILY SSF55681 10 237 8.36E-109 T 29-03-2018 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CPU03_RS05105 d1fe42beedb98865ea3edc9b5eb0dc72 572 Pfam PF03129 Anticodon binding domain 475 568 1.3E-21 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS02185 c22db2c80951ffcb594ee33f14b2cc93 321 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 1.3E-19 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS02185 c22db2c80951ffcb594ee33f14b2cc93 321 Pfam PF00700 Bacterial flagellin C-terminal helical region 242 316 8.3E-7 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS02185 c22db2c80951ffcb594ee33f14b2cc93 321 SUPERFAMILY SSF64518 1 318 4.05E-57 T 29-03-2018 CPU03_RS02185 c22db2c80951ffcb594ee33f14b2cc93 321 Gene3D G3DSA:1.20.1330.10 38 295 1.9E-23 T 29-03-2018 CPU03_RS02185 c22db2c80951ffcb594ee33f14b2cc93 321 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 197 4.8E-63 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 PIRSF PIRSF034515 1 1023 0.0 T 29-03-2018 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Gene3D G3DSA:2.60.120.430 26 235 5.9E-46 T 29-03-2018 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Gene3D G3DSA:1.50.10.100 236 619 5.0E-72 T 29-03-2018 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 626 880 2.6E-35 T 29-03-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 SUPERFAMILY SSF49863 902 1022 8.24E-30 T 29-03-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 SUPERFAMILY SSF48230 237 618 3.21E-130 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Pfam PF09093 Lyase, catalytic 246 603 2.0E-131 T 29-03-2018 IPR015177 Lyase, catalytic CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 903 963 1.0E-6 T 29-03-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 SUPERFAMILY SSF74650 620 896 5.23E-77 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Gene3D G3DSA:2.70.98.10 620 901 1.5E-74 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Gene3D G3DSA:2.60.220.10 905 1021 3.6E-25 T 29-03-2018 CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 SUPERFAMILY SSF49785 35 234 1.87E-60 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS10765 1470043a2be69780aedfe6312ef9a83a 1023 Pfam PF09092 Lyase, N terminal 40 232 3.2E-57 T 29-03-2018 IPR015176 Lyase, N-terminal CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.5E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Gene3D G3DSA:3.30.390.30 340 463 8.6E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-27 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.4E-27 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.4E-27 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.4E-27 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.4E-27 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Gene3D G3DSA:3.40.50.720 171 339 3.7E-28 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 SUPERFAMILY SSF51905 1 323 1.46E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.3E-29 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.544 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.9E-51 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 PIRSF PIRSF000350 1 463 1.8E-69 T 29-03-2018 CPU03_RS07780 07232beb004aae2215163971a34237fc 466 Gene3D G3DSA:3.50.50.60 3 163 5.0E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08910 0a75dd8bcf814e5f5510f4800cce749c 224 SUPERFAMILY SSF50800 5 223 2.93E-71 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CPU03_RS08910 0a75dd8bcf814e5f5510f4800cce749c 224 Gene3D G3DSA:2.40.33.20 1 224 1.7E-47 T 29-03-2018 CPU03_RS08910 0a75dd8bcf814e5f5510f4800cce749c 224 Pfam PF03473 MOSC domain 46 153 1.3E-20 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CPU03_RS08910 0a75dd8bcf814e5f5510f4800cce749c 224 Pfam PF03475 3-alpha domain 168 211 2.3E-14 T 29-03-2018 IPR005163 3-alpha domain CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 29-03-2018 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS09825 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CPU03_RS15240 8444cf3f852d4163a4db06ece853d512 473 Gene3D G3DSA:3.90.1700.10 302 464 1.9E-72 T 29-03-2018 CPU03_RS15240 8444cf3f852d4163a4db06ece853d512 473 Gene3D G3DSA:3.90.1710.10 158 299 4.8E-65 T 29-03-2018 CPU03_RS15240 8444cf3f852d4163a4db06ece853d512 473 Pfam PF06545 Protein of unknown function (DUF1116) 140 354 1.9E-97 T 29-03-2018 IPR009499 Protein of unknown function DUF1116 CPU03_RS15240 8444cf3f852d4163a4db06ece853d512 473 Gene3D G3DSA:1.10.10.660 93 157 2.2E-34 T 29-03-2018 IPR024033 Uncharacterised domain, YlbE CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 77 1.0E-19 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 Gene3D G3DSA:3.30.1330.30 1 76 1.3E-18 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 244 44.564 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 8.1E-40 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 SMART SM00967 4 80 3.8E-22 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 243 1.1E-88 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 SUPERFAMILY SSF75217 68 244 5.1E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 Gene3D G3DSA:3.40.1280.10 77 247 4.9E-48 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS06250 e7767a0b0664362f0c4a61ff1419e75c 247 SUPERFAMILY SSF55315 2 76 3.77E-21 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 Gene3D G3DSA:1.10.10.60 245 324 1.7E-6 T 29-03-2018 CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 SMART SM00382 27 170 3.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 Pfam PF00158 Sigma-54 interaction domain 8 170 8.0E-60 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 221 230 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 Gene3D G3DSA:1.10.8.60 180 244 3.5E-19 T 29-03-2018 CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 7 256 2.5E-141 T 29-03-2018 IPR014317 Transcription activator PspF CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 Gene3D G3DSA:3.40.50.300 1 178 3.6E-28 T 29-03-2018 CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 93 108 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CPU03_RS00455 084a172ac2f7871c22014f1519cf20d1 346 SUPERFAMILY SSF52540 8 240 3.45E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 107 188 2.9E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 Pfam PF02378 Phosphotransferase system, EIIC 233 495 3.3E-17 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 SUPERFAMILY SSF52794 104 204 1.52E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 Gene3D G3DSA:3.40.50.2300 104 202 2.4E-37 T 29-03-2018 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 Gene3D G3DSA:3.40.50.2300 35 85 2.3E-5 T 29-03-2018 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 217 552 1.3E-145 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 106 189 1.2E-38 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CPU03_RS13705 459aeb1f40a2ad6befa02709a9f6e1a0 566 SUPERFAMILY SSF52794 4 88 2.22E-10 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 2.7E-8 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.2E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.2E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.2E-7 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 373 1.2E-40 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 5.9E-25 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 SUPERFAMILY SSF53671 18 373 2.49E-57 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 5.7E-203 T 29-03-2018 IPR017702 Putative carbamoyltransferase YgeW CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 Gene3D G3DSA:3.40.50.1370 186 376 3.1E-36 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09710 41cdc898c7ef2324b638d8a85c1c84ce 395 Gene3D G3DSA:3.40.50.1370 7 185 1.4E-33 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 Pfam PF03938 Outer membrane protein (OmpH-like) 11 163 3.6E-36 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 Gene3D G3DSA:3.30.910.20 89 165 7.3E-18 T 29-03-2018 CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 SUPERFAMILY SSF111384 22 164 6.15E-39 T 29-03-2018 IPR024930 Skp domain CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 SMART SM00935 12 165 7.5E-55 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 PIRSF PIRSF002094 1 165 4.4E-60 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CPU03_RS04145 b1519e9ea2b309fa59b864e639d77c19 165 Gene3D G3DSA:3.30.910.20 11 88 1.7E-11 T 29-03-2018 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 5.8E-47 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 SUPERFAMILY SSF54686 3 133 1.7E-54 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 Gene3D G3DSA:3.90.1170.10 1 136 8.9E-50 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.843 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09415 fc94d82af500226e7e1b7ce9cfc0cccd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.5E-58 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 SUPERFAMILY SSF52172 2 177 4.18E-38 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 SMART SM00862 146 221 4.5E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 5.0E-94 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 2.3E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 Pfam PF00072 Response regulator receiver domain 3 113 2.0E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 Gene3D G3DSA:1.10.10.10 122 227 1.0E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 SMART SM00448 1 112 1.6E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16185 999effe700f9e0c8221a5ce1d649f3a4 227 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-30 T 29-03-2018 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 SUPERFAMILY SSF64518 1 423 3.27E-106 T 29-03-2018 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.2E-45 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 Gene3D G3DSA:1.20.1330.10 40 395 2.0E-71 T 29-03-2018 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 Pfam PF00700 Bacterial flagellin C-terminal helical region 338 422 2.1E-29 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 PRINTS PR00207 Flagellin signature 76 95 2.2E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 PRINTS PR00207 Flagellin signature 111 134 2.2E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS14455 d5d75c256ba1d35919d3d81c790413eb 423 PRINTS PR00207 Flagellin signature 37 54 2.2E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 Gene3D G3DSA:1.10.10.10 1 68 7.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 SMART SM00895 90 217 1.7E-21 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.9E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.9E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 6.2E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 Pfam PF07729 FCD domain 90 216 1.4E-20 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 SUPERFAMILY SSF48008 89 225 1.39E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 SMART SM00345 7 66 2.6E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 Gene3D G3DSA:1.20.120.530 71 230 5.2E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS13730 086b05d35c812c0d9fba795826aaee93 248 SUPERFAMILY SSF46785 2 70 9.35E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 Gene3D G3DSA:3.40.190.10 186 267 1.4E-5 T 29-03-2018 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 Pfam PF03466 LysR substrate binding domain 91 294 2.0E-19 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 SUPERFAMILY SSF46785 1 82 7.89E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 Gene3D G3DSA:1.10.10.10 1 82 2.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 SUPERFAMILY SSF53850 92 297 1.54E-20 T 29-03-2018 CPU03_RS01680 b695c66ad2938ab8f5f6e0777f96c083 299 Gene3D G3DSA:3.40.190.10 88 185 5.2E-7 T 29-03-2018 CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 SMART SM00232 4 117 0.0053 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 SUPERFAMILY SSF102712 4 94 5.49E-16 T 29-03-2018 CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 SUPERFAMILY SSF54001 107 227 4.51E-18 T 29-03-2018 CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 95 1.4E-11 T 29-03-2018 IPR028090 JAB domain, prokaryotic CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 Gene3D G3DSA:3.90.1720.10 51 233 1.0E-20 T 29-03-2018 CPU03_RS00120 cc645bd38e620a01b2fbe0b5c88ee192 245 Pfam PF00877 NlpC/P60 family 109 222 2.2E-15 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 Gene3D G3DSA:3.40.50.980 190 387 2.2E-41 T 29-03-2018 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 Pfam PF00501 AMP-binding enzyme 17 468 7.1E-97 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 Gene3D G3DSA:3.40.50.980 8 189 3.2E-36 T 29-03-2018 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 Gene3D G3DSA:2.30.38.10 388 461 3.5E-21 T 29-03-2018 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 Gene3D G3DSA:3.30.300.30 463 599 5.4E-14 T 29-03-2018 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 SUPERFAMILY SSF56801 9 287 7.06E-116 T 29-03-2018 CPU03_RS04735 bf251fe4285d2b8eb7aa79da03555ce6 600 SUPERFAMILY SSF56801 338 597 7.06E-116 T 29-03-2018 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 SMART SM00421 136 193 6.5E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 186 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 SMART SM00448 5 116 1.7E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 SUPERFAMILY SSF46894 134 187 7.37E-13 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 Pfam PF00072 Response regulator receiver domain 7 117 4.3E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 SUPERFAMILY SSF52172 5 151 7.83E-32 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 7.4E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 7.4E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 7.4E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 Gene3D G3DSA:1.10.10.10 142 203 4.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16105 7e7461542538081af4f4bdefb8ef0ac7 208 Gene3D G3DSA:3.40.50.2300 4 141 8.6E-30 T 29-03-2018 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Pfam PF00809 Pterin binding enzyme 360 598 2.1E-60 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SMART SM01018 657 740 3.9E-42 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:3.40.50.280 743 895 1.4E-54 T 29-03-2018 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 PIRSF PIRSF000381 1 1195 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SUPERFAMILY SSF52242 743 894 2.62E-46 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SUPERFAMILY SSF82282 7 399 1.22E-119 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:3.10.196.10 956 1078 7.6E-42 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:3.10.196.10 1079 1227 1.1E-64 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:3.20.20.20 345 643 1.7E-71 T 29-03-2018 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:3.20.20.330 2 337 1.1E-114 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SUPERFAMILY SSF56507 902 1227 1.44E-131 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Pfam PF02607 B12 binding domain 659 732 9.2E-25 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.2E-123 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 3.5E-83 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Gene3D G3DSA:1.10.1240.10 652 737 1.4E-35 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SUPERFAMILY SSF51717 356 630 2.75E-84 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 Pfam PF02310 B12 binding domain 748 841 1.2E-17 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CPU03_RS06930 8131fb9aae5892bbb8b8b1ae9273f036 1227 SUPERFAMILY SSF47644 653 739 3.14E-27 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 79 105 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 2.7E-67 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 Pfam PF01578 Cytochrome C assembly protein 88 294 2.1E-41 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 400 4.7E-13 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CPU03_RS11410 a1fb84d106e7cc8f45ca30c96b17954d 559 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 410 554 8.6E-35 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CPU03_RS07845 811a3814433a26ecd0b9d04e7e24ebd3 411 Gene3D G3DSA:1.20.1250.20 211 407 1.7E-10 T 29-03-2018 CPU03_RS07845 811a3814433a26ecd0b9d04e7e24ebd3 411 Pfam PF07690 Major Facilitator Superfamily 27 364 4.5E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS07845 811a3814433a26ecd0b9d04e7e24ebd3 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CPU03_RS07845 811a3814433a26ecd0b9d04e7e24ebd3 411 SUPERFAMILY SSF103473 6 402 1.44E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS07845 811a3814433a26ecd0b9d04e7e24ebd3 411 Gene3D G3DSA:1.20.1250.20 7 203 4.1E-30 T 29-03-2018 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.118 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 3.7E-95 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 PIRSF PIRSF001555 1 329 5.4E-150 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 Gene3D G3DSA:3.30.930.10 1 328 5.9E-41 T 29-03-2018 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 SUPERFAMILY SSF55681 7 329 6.02E-94 T 29-03-2018 CPU03_RS08040 264e0a535998a6d09ad459767a5b2241 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.0E-177 T 29-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Gene3D G3DSA:3.30.830.10 267 492 2.2E-55 T 29-03-2018 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 SUPERFAMILY SSF63411 34 260 1.17E-50 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 SUPERFAMILY SSF63411 266 503 7.33E-66 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Gene3D G3DSA:3.30.830.10 504 723 4.5E-26 T 29-03-2018 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 SUPERFAMILY SSF63411 748 952 2.79E-41 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 SUPERFAMILY SSF63411 505 730 1.28E-38 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Pfam PF16187 Middle or third domain of peptidase_M16 401 672 6.2E-52 T 29-03-2018 IPR032632 Peptidase M16, middle/third domain CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Gene3D G3DSA:3.30.830.10 724 961 1.9E-37 T 29-03-2018 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Pfam PF05193 Peptidase M16 inactive domain 683 860 2.0E-8 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Pfam PF05193 Peptidase M16 inactive domain 217 393 2.6E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Gene3D G3DSA:3.30.830.10 23 266 1.6E-70 T 29-03-2018 CPU03_RS04320 cc70518288a5e7aae1810b0fcdf76413 961 Pfam PF00675 Insulinase (Peptidase family M16) 55 192 8.0E-34 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CPU03_RS14080 f3362ffd5c4d51a2a3d29f79e9af7595 223 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 154 165 1.4E-13 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CPU03_RS14080 f3362ffd5c4d51a2a3d29f79e9af7595 223 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 103 1.4E-13 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CPU03_RS14080 f3362ffd5c4d51a2a3d29f79e9af7595 223 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 166 181 1.4E-13 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CPU03_RS14080 f3362ffd5c4d51a2a3d29f79e9af7595 223 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 153 1.4E-13 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CPU03_RS14080 f3362ffd5c4d51a2a3d29f79e9af7595 223 Pfam PF01478 Type IV leader peptidase family 79 182 2.8E-18 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 SUPERFAMILY SSF52467 185 342 4.0E-55 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.5E-41 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.0E-215 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 SUPERFAMILY SSF52518 1 172 5.89E-63 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Gene3D G3DSA:3.40.50.1220 186 334 2.0E-47 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Gene3D G3DSA:3.40.50.970 335 535 6.3E-50 T 29-03-2018 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 4.0E-58 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Gene3D G3DSA:3.40.50.970 1 185 2.3E-64 T 29-03-2018 CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 SUPERFAMILY SSF52518 358 545 3.4E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS07550 1560b017da3f099395fa111d497fc9f8 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.6E-48 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 1.9E-32 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 224 28.112 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 223 1.7E-68 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 SUPERFAMILY SSF63848 118 223 1.96E-30 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 Gene3D G3DSA:2.160.20.70 102 224 1.1E-31 T 29-03-2018 CPU03_RS01305 5fff40135a64542b56d181b559f6fb0b 224 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 120 220 5.5E-31 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Pfam PF01256 Carbohydrate kinase 256 493 7.5E-63 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Gene3D G3DSA:3.40.1190.20 226 497 5.6E-49 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 24 218 5.7E-50 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Gene3D G3DSA:3.40.50.10260 3 225 1.9E-61 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Pfam PF03853 YjeF-related protein N-terminus 40 198 3.6E-39 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 497 2.6E-72 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 233 497 22.746 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 PIRSF PIRSF017184 15 498 6.2E-141 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 SUPERFAMILY SSF53613 231 496 8.56E-73 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 SUPERFAMILY SSF64153 17 254 5.62E-60 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CPU03_RS06320 b64a7a2d54bef48da5655247ef944709 498 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 219 23.065 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 Pfam PF00227 Proteasome subunit 2 168 6.0E-22 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 SUPERFAMILY SSF56235 1 172 2.85E-58 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 Gene3D G3DSA:3.60.20.10 2 173 2.3E-30 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.694 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 PIRSF PIRSF039093 1 175 4.4E-87 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CPU03_RS08495 f1ded496370206c43f3e716694aa4531 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.3E-85 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 SUPERFAMILY SSF53850 96 311 1.63E-17 T 29-03-2018 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 74 5.4E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 Pfam PF03466 LysR substrate binding domain 98 304 4.8E-10 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 Gene3D G3DSA:1.10.10.10 8 97 4.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 SUPERFAMILY SSF46785 14 94 2.02E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 Gene3D G3DSA:3.40.190.10 98 317 2.7E-12 T 29-03-2018 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10385 ab3bf73ddc88029d4dd475a4b47fae80 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 Pfam PF03796 DnaB-like helicase C terminal domain 174 422 7.4E-76 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 Gene3D G3DSA:3.40.50.300 155 442 2.5E-48 T 29-03-2018 CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 SMART SM00382 190 401 8.3E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 Gene3D G3DSA:1.10.860.10 3 139 1.0E-17 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 SUPERFAMILY SSF48024 8 105 1.14E-12 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 SUPERFAMILY SSF52540 173 248 1.96E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 SUPERFAMILY SSF52540 280 426 1.96E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15895 9a0f093075cdd7c8ab7afab85a2ed010 460 Pfam PF00772 DnaB-like helicase N terminal domain 7 97 6.3E-12 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.333 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 Gene3D G3DSA:3.40.50.720 1 159 1.4E-35 T 29-03-2018 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 PIRSF PIRSF000193 2 269 4.4E-90 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 5.1E-37 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 265 9.6E-88 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.2E-21 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 SUPERFAMILY SSF51735 4 160 4.09E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 SUPERFAMILY SSF48179 161 268 1.65E-36 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS08600 4df2f189cf91442d49797a8ce468a183 269 Gene3D G3DSA:1.10.3730.10 160 269 6.1E-43 T 29-03-2018 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Gene3D G3DSA:3.40.50.300 128 331 2.2E-63 T 29-03-2018 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 8.1E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 SUPERFAMILY SSF140990 402 603 2.35E-73 T 29-03-2018 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 SUPERFAMILY SSF52540 141 391 3.66E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.415 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Pfam PF06480 FtsH Extracellular 5 93 8.7E-17 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Pfam PF01434 Peptidase family M41 382 591 2.6E-82 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.8E-247 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 Gene3D G3DSA:1.10.8.60 332 411 2.0E-25 T 29-03-2018 CPU03_RS06055 c81be2ec50cd918cf4515fbd0447dbea 657 SMART SM00382 184 323 1.9E-26 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.4E-241 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 SUPERFAMILY SSF46977 453 588 1.05E-44 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Gene3D G3DSA:1.20.58.100 431 540 1.2E-33 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Gene3D G3DSA:3.50.50.60 302 430 1.0E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Gene3D G3DSA:3.50.50.60 3 294 5.0E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.2E-278 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 SUPERFAMILY SSF51905 4 259 2.18E-76 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 SUPERFAMILY SSF51905 359 437 2.18E-76 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Gene3D G3DSA:4.10.80.40 541 588 1.9E-12 T 29-03-2018 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Pfam PF00890 FAD binding domain 9 405 1.9E-119 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 PIRSF PIRSF000171 1 580 1.5E-45 T 29-03-2018 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 9.9E-34 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12520 44e38cc26f918b9737eb560d7d4329ff 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS10370 96ba8d3231e4a6d37cb44bedab8aa03f 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.4E-186 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS10370 96ba8d3231e4a6d37cb44bedab8aa03f 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 6.6E-103 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS10370 96ba8d3231e4a6d37cb44bedab8aa03f 378 PIRSF PIRSF000267 2 377 7.5E-122 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 SUPERFAMILY SSF55729 349 513 2.16E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Gene3D G3DSA:3.40.630.30 337 524 6.9E-15 T 29-03-2018 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Pfam PF08351 Domain of unknown function (DUF1726) 60 146 3.4E-8 T 29-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Pfam PF13718 GNAT acetyltransferase 2 368 478 4.9E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Gene3D G3DSA:3.40.50.300 163 334 1.2E-4 T 29-03-2018 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 SUPERFAMILY SSF52540 173 283 1.55E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Pfam PF05127 Helicase 232 334 1.5E-31 T 29-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Pfam PF17176 tRNA-binding domain 536 653 1.3E-24 T 29-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 CPU03_RS02875 be32c579c23d8f85a0e60827c70f0d0c 656 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 14 653 47.425 T 29-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 SUPERFAMILY SSF50249 3 66 1.2E-10 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 Gene3D G3DSA:3.40.50.150 83 436 9.9E-56 T 29-03-2018 CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 SUPERFAMILY SSF53335 75 436 5.86E-88 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 266 435 1.3E-24 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 Gene3D G3DSA:2.40.50.140 1 82 1.1E-23 T 29-03-2018 CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 Pfam PF01938 TRAM domain 14 66 1.2E-7 T 29-03-2018 IPR002792 TRAM domain CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 438 65.316 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CPU03_RS11790 5cde646d556f4aaf2f03230f797d6a12 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 5.8E-135 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 Gene3D G3DSA:3.40.190.10 96 183 2.0E-16 T 29-03-2018 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.7E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 Pfam PF03466 LysR substrate binding domain 93 298 1.1E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 SUPERFAMILY SSF53850 91 302 5.88E-34 T 29-03-2018 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 Gene3D G3DSA:1.10.10.10 6 95 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 Gene3D G3DSA:3.40.190.10 184 270 6.0E-9 T 29-03-2018 CPU03_RS01715 f24fef0cdde649fd7980f18623d5085b 304 SUPERFAMILY SSF46785 5 115 9.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 SUPERFAMILY SSF52540 96 381 1.77E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Gene3D G3DSA:2.40.30.20 3 82 4.5E-28 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 SUPERFAMILY SSF47917 383 511 5.76E-45 T 29-03-2018 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Gene3D G3DSA:3.40.50.300 83 375 5.9E-112 T 29-03-2018 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.2E-45 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.5E-13 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.092 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.9E-261 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Gene3D G3DSA:1.20.150.20 384 510 5.5E-46 T 29-03-2018 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08090 6644065e5cca1a5572cdd4603d9b7be3 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.2E-73 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 SUPERFAMILY SSF46548 209 341 1.74E-16 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 Gene3D G3DSA:3.30.70.20 319 348 0.014 T 29-03-2018 CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 Gene3D G3DSA:3.30.70.20 183 233 0.028 T 29-03-2018 CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 Gene3D G3DSA:3.30.70.20 234 318 1.3E-10 T 29-03-2018 CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 342 4.6E-154 T 29-03-2018 IPR014259 Sulphite reductase, subunit A CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 Pfam PF17179 4Fe-4S dicluster domain 229 327 8.3E-31 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16510 2455862b607bf0217fd6bad2d8c21c73 349 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SUPERFAMILY SSF68912 1 46 2.2E-12 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 29-03-2018 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SMART SM00382 170 355 5.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SMART SM00959 5 47 1.1E-18 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.0E-17 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.92 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SUPERFAMILY SSF52540 90 371 1.87E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Gene3D G3DSA:1.10.720.10 1 43 1.0E-13 T 29-03-2018 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 SMART SM00357 52 118 9.6E-19 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 9.8E-223 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CPU03_RS07490 38eef2acff8054a664d338720c312e7d 419 Gene3D G3DSA:3.40.50.300 129 419 2.7E-58 T 29-03-2018 CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 3 399 6.5E-201 T 29-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 SUPERFAMILY SSF53383 4 394 7.56E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 Gene3D G3DSA:3.40.640.10 29 276 1.8E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 Pfam PF00266 Aminotransferase class-V 20 386 3.4E-129 T 29-03-2018 IPR000192 Aminotransferase class V domain CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 211 230 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CPU03_RS04265 0400a4d12e9fd7441fa9b7f86941232f 402 Gene3D G3DSA:3.90.1150.10 277 393 8.1E-38 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS01100 2186a3d30b98cd7cee0f6c07ec997772 189 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 180 4.8E-59 T 29-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CPU03_RS01100 2186a3d30b98cd7cee0f6c07ec997772 189 Gene3D G3DSA:3.40.50.450 1 189 9.5E-61 T 29-03-2018 CPU03_RS01100 2186a3d30b98cd7cee0f6c07ec997772 189 Pfam PF03641 Possible lysine decarboxylase 47 175 2.5E-39 T 29-03-2018 IPR031100 LOG family CPU03_RS01100 2186a3d30b98cd7cee0f6c07ec997772 189 SUPERFAMILY SSF102405 2 180 1.18E-59 T 29-03-2018 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 Gene3D G3DSA:1.20.120.220 96 272 1.5E-54 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 39 267 1.1E-42 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 Pfam PF00119 ATP synthase A chain 47 266 2.0E-55 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 272 16.129 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 PRINTS PR00123 ATP synthase A subunit signature 204 226 2.3E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 PRINTS PR00123 ATP synthase A subunit signature 252 267 2.3E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 PRINTS PR00123 ATP synthase A subunit signature 105 121 2.3E-15 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 SUPERFAMILY SSF81336 96 266 3.79E-50 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08070 3f6a6bc6c0a8c7efc96748babb40dbfa 272 ProSitePatterns PS00449 ATP synthase a subunit signature. 207 216 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 353 55.733 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 Gene3D G3DSA:3.90.1150.10 273 352 4.4E-14 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 Gene3D G3DSA:3.40.640.10 56 272 6.2E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 Pfam PF00155 Aminotransferase class I and II 46 347 8.9E-57 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 Gene3D G3DSA:3.90.1150.10 3 55 3.3E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 SUPERFAMILY SSF53383 14 351 1.51E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS13810 622a705b52a14cc8fb68c40c7173e5ac 357 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 3.3E-118 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 Gene3D G3DSA:1.10.150.210 124 170 6.5E-23 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 Gene3D G3DSA:3.40.50.1000 171 316 1.6E-23 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 284 3.8E-26 T 29-03-2018 CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 116 281 6.7E-15 T 29-03-2018 CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 99 316 9.4E-84 T 29-03-2018 CPU03_RS05150 89d3d3b3d4c94e382685b0d8b837326d 325 SUPERFAMILY SSF56784 112 317 1.6E-45 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.1E-264 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 Gene3D G3DSA:3.40.50.880 286 543 5.9E-75 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 SUPERFAMILY SSF52540 3 268 2.26E-122 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 Pfam PF06418 CTP synthase N-terminus 5 266 3.0E-126 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 SUPERFAMILY SSF52317 289 542 3.51E-88 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 Gene3D G3DSA:3.40.50.300 1 284 1.8E-129 T 29-03-2018 CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.724 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CPU03_RS11805 72e716ecb0a1ba85227cb26faae32121 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.4E-62 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS03145 23b6b82805c7f812164c1e96876518f1 161 SUPERFAMILY SSF55826 2 155 1.7E-45 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS03145 23b6b82805c7f812164c1e96876518f1 161 PIRSF PIRSF006181 1 159 2.1E-56 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CPU03_RS03145 23b6b82805c7f812164c1e96876518f1 161 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 5.0E-56 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CPU03_RS03145 23b6b82805c7f812164c1e96876518f1 161 Gene3D G3DSA:3.90.960.10 1 159 5.6E-44 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS03145 23b6b82805c7f812164c1e96876518f1 161 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 8.3E-24 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Pfam PF13549 ATP-grasp domain 472 693 4.7E-67 T 29-03-2018 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SUPERFAMILY SSF51735 2 135 5.01E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.40.50.261 285 452 1.1E-26 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.40.50.261 130 284 1.5E-36 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.40.630.30 715 889 4.4E-21 T 29-03-2018 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.40.50.720 1 129 7.4E-36 T 29-03-2018 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SUPERFAMILY SSF52210 287 447 1.31E-29 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SUPERFAMILY SSF56059 481 690 2.14E-25 T 29-03-2018 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.30.1490.20 501 561 1.6E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SUPERFAMILY SSF52210 125 286 7.98E-36 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Gene3D G3DSA:3.30.470.20 562 696 2.0E-19 T 29-03-2018 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SMART SM00881 9 104 2.2E-27 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 1.1E-42 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 SUPERFAMILY SSF55729 727 866 5.23E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Pfam PF13380 CoA binding domain 13 130 6.9E-25 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS05040 5d2573fda8927cea285d82a220183010 890 Pfam PF00583 Acetyltransferase (GNAT) family 760 862 7.0E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 Gene3D G3DSA:3.30.1360.80 3 161 5.1E-62 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 3.4E-60 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PIRSF PIRSF006160 1 162 1.3E-63 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.528 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 SUPERFAMILY SSF63411 4 161 1.1E-64 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.1E-48 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.1E-48 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.1E-48 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.1E-48 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.1E-48 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11085 7b6e0fb8dfeaa47ed9c213ebc9947880 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 2.0E-67 T 29-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Pfam PF01565 FAD binding domain 52 191 2.6E-35 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 SUPERFAMILY SSF46548 654 691 1.55E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 SUPERFAMILY SSF46548 518 622 1.55E-7 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Gene3D G3DSA:1.10.1060.10 542 702 1.7E-11 T 29-03-2018 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Gene3D G3DSA:3.30.465.10 106 303 8.8E-43 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 SUPERFAMILY SSF55103 258 542 1.8E-52 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 SUPERFAMILY SSF56176 245 282 1.06E-48 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 SUPERFAMILY SSF56176 17 192 1.06E-48 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Pfam PF13183 4Fe-4S dicluster domain 576 686 1.1E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 672 683 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Gene3D G3DSA:3.30.43.10 36 105 1.4E-17 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Gene3D G3DSA:1.10.45.10 501 539 6.2E-7 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CPU03_RS16680 a32808e0bb84b6cf4f596f49e9fd80ae 1029 Pfam PF02913 FAD linked oxidases, C-terminal domain 282 539 5.4E-62 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CPU03_RS04020 331ada29491dd2480045da665ee51b86 172 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CPU03_RS04020 331ada29491dd2480045da665ee51b86 172 SUPERFAMILY SSF53927 3 153 1.84E-57 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS04020 331ada29491dd2480045da665ee51b86 172 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 48.656 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CPU03_RS04020 331ada29491dd2480045da665ee51b86 172 Gene3D G3DSA:3.40.140.10 1 159 7.1E-54 T 29-03-2018 CPU03_RS04020 331ada29491dd2480045da665ee51b86 172 Pfam PF14437 MafB19-like deaminase 5 151 5.5E-33 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 Pfam PF17158 Membrane-associated sensor, integral membrane domain 41 271 5.1E-66 T 29-03-2018 IPR033424 Membrane-associated sensor domain CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 Gene3D G3DSA:3.30.70.270 280 450 5.4E-48 T 29-03-2018 CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 SMART SM00267 274 447 7.5E-52 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 SUPERFAMILY SSF55073 290 446 3.06E-40 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 285 443 6.6E-41 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS11870 f49517e0881bead449041ee0dc2820cb 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 447 1.4E-40 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS09080 c1d5a3250909ba6b8c796fd91c64ece1 327 Pfam PF00561 alpha/beta hydrolase fold 61 302 5.8E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS09080 c1d5a3250909ba6b8c796fd91c64ece1 327 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 29-03-2018 IPR000952 AB hydrolase 4, conserved site CPU03_RS09080 c1d5a3250909ba6b8c796fd91c64ece1 327 SUPERFAMILY SSF53474 26 301 8.03E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS09080 c1d5a3250909ba6b8c796fd91c64ece1 327 Gene3D G3DSA:3.40.50.1820 26 326 3.4E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS09080 c1d5a3250909ba6b8c796fd91c64ece1 327 PIRSF PIRSF005211 1 327 4.4E-106 T 29-03-2018 IPR012020 AB hydrolase 4 family CPU03_RS03915 b0a1fbb0b7e3e58a757d419ea2a92b93 420 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 7 417 3.0E-187 T 29-03-2018 IPR010520 UPF0255 family CPU03_RS03915 b0a1fbb0b7e3e58a757d419ea2a92b93 420 Gene3D G3DSA:3.40.50.1820 162 418 1.4E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS03915 b0a1fbb0b7e3e58a757d419ea2a92b93 420 SUPERFAMILY SSF53474 51 418 1.72E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS03915 b0a1fbb0b7e3e58a757d419ea2a92b93 420 Gene3D G3DSA:1.20.1440.110 54 161 1.7E-23 T 29-03-2018 CPU03_RS03915 b0a1fbb0b7e3e58a757d419ea2a92b93 420 Hamap MF_01063 Esterase FrsA [frsA]. 6 420 61.164 T 29-03-2018 IPR010520 UPF0255 family CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 Gene3D G3DSA:2.60.40.1090 30 181 1.3E-10 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 SUPERFAMILY SSF49401 40 181 1.12E-8 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 Pfam PF00419 Fimbrial protein 35 181 3.4E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 36 59 1.1E-14 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 121 144 1.1E-14 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS12065 3a0714d1583810c510fe57e3c4039af7 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 80 94 1.1E-14 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Pfam PF01706 FliG C-terminal domain 216 322 1.6E-38 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PIRSF PIRSF003161 1 330 6.5E-117 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.3E-73 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Pfam PF14842 FliG N-terminal domain 3 102 1.8E-30 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Gene3D G3DSA:1.10.220.30 3 65 8.4E-11 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Gene3D G3DSA:1.10.220.30 66 189 3.2E-23 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Gene3D G3DSA:1.10.220.30 193 330 7.8E-31 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 SUPERFAMILY SSF48029 6 103 1.11E-20 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 Pfam PF14841 FliG middle domain 115 186 4.9E-25 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 3.1E-139 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CPU03_RS14420 3d55bc0b113a85c62b21f077aff6317a 330 SUPERFAMILY SSF48029 114 323 1.44E-64 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 SUPERFAMILY SSF50465 298 393 2.48E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Gene3D G3DSA:3.40.50.300 2 74 5.0E-11 T 29-03-2018 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.9E-59 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.5E-239 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.591 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Gene3D G3DSA:2.40.30.10 206 299 2.6E-32 T 29-03-2018 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 SUPERFAMILY SSF50447 205 301 3.53E-31 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Gene3D G3DSA:2.40.30.10 300 393 5.8E-34 T 29-03-2018 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 SUPERFAMILY SSF52540 6 219 3.38E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS07100 f57ebf7053e8f08ad54377fa091db966 394 Gene3D G3DSA:3.40.50.300 75 203 2.4E-32 T 29-03-2018 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.1E-65 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 Gene3D G3DSA:1.10.10.250 73 141 3.3E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 9.2E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 SUPERFAMILY SSF54747 3 73 3.79E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.543 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 SMART SM00649 9 141 8.9E-85 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 29-03-2018 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 Gene3D G3DSA:3.30.1550.10 3 72 1.4E-34 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal CPU03_RS07085 b025ecdf428fdf95c003dc18a3fcb563 142 SUPERFAMILY SSF46906 68 141 3.4E-26 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 Pfam PF03610 PTS system fructose IIA component 5 116 3.7E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 Pfam PF03830 PTS system sorbose subfamily IIB component 163 309 2.6E-55 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 Gene3D G3DSA:3.40.50.510 2 136 6.0E-36 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 Gene3D G3DSA:3.40.35.10 162 318 4.6E-60 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 SUPERFAMILY SSF52728 161 320 9.94E-55 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 SUPERFAMILY SSF53062 3 127 3.4E-36 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 163 310 5.7E-56 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CPU03_RS00790 ef22caf9e3159010b45e5261088a3e54 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 6.5E-46 T 29-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CPU03_RS15695 0a4d97b14cf086bad1bb578093906f02 131 Gene3D G3DSA:3.10.180.10 1 130 9.8E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS15695 0a4d97b14cf086bad1bb578093906f02 131 SUPERFAMILY SSF54593 3 127 3.44E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS15695 0a4d97b14cf086bad1bb578093906f02 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 2.4E-10 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SMART SM00257 510 553 9.2E-16 T 29-03-2018 IPR018392 LysM domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SMART SM00257 450 493 1.7E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Gene3D G3DSA:3.10.350.10 437 507 1.7E-12 T 29-03-2018 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 191 409 3.9E-44 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SUPERFAMILY SSF54106 449 493 4.84E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SUPERFAMILY SSF53187 337 413 5.02E-49 T 29-03-2018 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SUPERFAMILY SSF53187 189 285 5.02E-49 T 29-03-2018 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Gene3D G3DSA:3.40.630.40 186 416 1.5E-54 T 29-03-2018 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Pfam PF01476 LysM domain 511 553 1.2E-13 T 29-03-2018 IPR018392 LysM domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Pfam PF01476 LysM domain 451 493 3.7E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 Gene3D G3DSA:3.10.350.10 508 555 1.4E-14 T 29-03-2018 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SMART SM00646 251 410 7.5E-66 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS06310 1e5bb9d7bd782544dda8bde4977343be 555 SUPERFAMILY SSF54106 509 553 4.84E-11 T 29-03-2018 IPR018392 LysM domain CPU03_RS16365 51d978d2be14a7a21f471af6a72da255 71 Gene3D G3DSA:1.20.1280.40 1 70 6.4E-26 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS16365 51d978d2be14a7a21f471af6a72da255 71 Pfam PF05321 Haemolysin expression modulating protein 9 68 1.5E-24 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS16365 51d978d2be14a7a21f471af6a72da255 71 SUPERFAMILY SSF68989 2 70 6.8E-19 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 316 50.221 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 SUPERFAMILY SSF46548 140 257 3.77E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 349 3.7E-149 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 Gene3D G3DSA:3.30.70.20 201 373 5.4E-11 T 29-03-2018 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 Pfam PF13484 4Fe-4S double cluster binding domain 193 257 3.5E-18 T 29-03-2018 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 Pfam PF08331 Domain of unknown function (DUF1730) 62 141 1.2E-24 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CPU03_RS06325 fa8ba9b8c766ba69108966a2e8c71da8 380 Gene3D G3DSA:3.30.70.20 165 200 0.053 T 29-03-2018 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 9.3E-158 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 SMART SM00729 84 290 1.3E-14 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 SUPERFAMILY SSF102114 53 314 1.57E-67 T 29-03-2018 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 Gene3D G3DSA:3.20.20.70 29 309 5.2E-29 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 PIRSF PIRSF005963 2 320 6.3E-132 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 158.59 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 73 1.6E-6 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12180 d9204508ad45ffcb6693762f445429cc 321 Pfam PF04055 Radical SAM superfamily 91 251 5.3E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS05185 4f0b10d9d30008d890a295518699ea5d 196 SMART SM00749 56 119 1.1E-8 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CPU03_RS05185 4f0b10d9d30008d890a295518699ea5d 196 SMART SM00749 134 196 9.0E-4 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CPU03_RS05185 4f0b10d9d30008d890a295518699ea5d 196 Pfam PF04972 BON domain 130 194 3.3E-17 T 29-03-2018 IPR007055 BON domain CPU03_RS05185 4f0b10d9d30008d890a295518699ea5d 196 Pfam PF04972 BON domain 51 117 2.0E-15 T 29-03-2018 IPR007055 BON domain CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 29-03-2018 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 SUPERFAMILY SSF53067 9 152 8.17E-38 T 29-03-2018 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.3E-171 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 3.1E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 3.1E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 3.1E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 3.1E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 3.1E-66 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 29-03-2018 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 Gene3D G3DSA:3.30.420.40 8 172 5.4E-42 T 29-03-2018 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 Pfam PF06723 MreB/Mbl protein 11 338 8.4E-151 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CPU03_RS09885 b7030529b419faa3a2a6ebf60d47fda7 347 Gene3D G3DSA:3.90.640.10 190 255 8.8E-28 T 29-03-2018 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.4E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 Pfam PF00672 HAMP domain 182 225 1.8E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 Gene3D G3DSA:1.10.287.130 223 289 1.5E-12 T 29-03-2018 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 SMART SM00388 233 293 2.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 SUPERFAMILY SSF55874 292 440 1.01E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 5.9E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 SMART SM00304 180 232 3.0E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 SMART SM00387 332 440 8.8E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 SUPERFAMILY SSF47384 227 289 5.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS09150 54e3332dfc6d41928f575bce979be212 461 Gene3D G3DSA:3.30.565.10 294 447 2.3E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Gene3D G3DSA:3.90.1150.10 421 600 1.1E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Gene3D G3DSA:3.40.640.10 109 420 2.2E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 SUPERFAMILY SSF55904 571 719 2.09E-47 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Gene3D G3DSA:3.90.100.10 601 720 2.2E-36 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 SUPERFAMILY SSF52172 1 108 1.54E-29 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 29-03-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Gene3D G3DSA:3.40.50.220 3 108 1.4E-33 T 29-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 1.6E-193 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.7E-49 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.9E-18 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 PIRSF PIRSF009393 1 720 2.2E-288 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CPU03_RS06685 394967a793ee9d4cf429a29201c45947 720 SUPERFAMILY SSF53383 109 567 1.35E-122 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF52540 356 469 5.31E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SMART SM00982 1011 1111 4.1E-42 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF143517 998 1150 2.48E-39 T 29-03-2018 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Pfam PF02559 CarD-like/TRCF domain 483 578 2.9E-23 T 29-03-2018 IPR003711 CarD-like/TRCF domain CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF141259 474 551 2.88E-22 T 29-03-2018 IPR003711 CarD-like/TRCF domain CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Gene3D G3DSA:3.40.50.300 290 796 4.0E-40 T 29-03-2018 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 912 3.0E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SMART SM00487 603 792 5.9E-33 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF52540 785 993 1.02E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Gene3D G3DSA:3.30.2060.10 136 181 4.0E-5 T 29-03-2018 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 151 1085 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Pfam PF03461 TRCF domain 1012 1103 3.0E-25 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF52540 527 786 2.14E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Gene3D G3DSA:3.40.50.300 797 959 3.3E-25 T 29-03-2018 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Pfam PF00270 DEAD/DEAH box helicase 608 768 1.3E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SUPERFAMILY SSF52540 16 346 2.12E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1131 28.24 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SMART SM01058 482 579 1.6E-48 T 29-03-2018 IPR003711 CarD-like/TRCF domain CPU03_RS14720 e66f16827e0306c387961849d1078e32 1153 SMART SM00490 829 913 7.7E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 Gene3D G3DSA:3.40.640.10 100 277 5.4E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 Pfam PF00155 Aminotransferase class I and II 43 387 7.6E-75 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 SUPERFAMILY SSF53383 4 396 2.39E-123 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.383 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 7.7E-215 T 29-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 Gene3D G3DSA:3.90.1150.10 20 99 1.8E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 Gene3D G3DSA:3.90.1150.10 278 397 4.2E-41 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS07575 7af92b4e448ccbb2b8d8c91bb968d5a1 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 19.022 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Gene3D G3DSA:2.40.50.100 1153 1213 1.4E-14 T 29-03-2018 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Gene3D G3DSA:2.40.50.100 1022 1126 6.2E-11 T 29-03-2018 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Gene3D G3DSA:2.40.50.100 907 1021 9.0E-28 T 29-03-2018 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 SMART SM00663 235 514 3.0E-183 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 8.0E-88 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.7E-26 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 1.8E-26 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 SUPERFAMILY SSF64484 1133 1363 0.0 T 29-03-2018 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.7E-77 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07060 f120b01fb385885f737e7d8c9839fe92 1406 Gene3D G3DSA:2.40.40.20 346 488 9.2E-40 T 29-03-2018 CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 8.0E-69 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 Pfam PF00696 Amino acid kinase family 4 226 2.6E-35 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 Gene3D G3DSA:3.40.1160.10 2 257 3.3E-43 T 29-03-2018 CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 PIRSF PIRSF000728 1 257 1.8E-68 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 SUPERFAMILY SSF53633 2 256 3.01E-57 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS07810 6390d3390d46e473f686218984dcecc6 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.464 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS08435 78d1ae394c71036d9ad71432cd173f8f 216 Pfam PF07305 Protein of unknown function (DUF1454) 9 209 3.9E-76 T 29-03-2018 IPR009918 Protein of unknown function DUF1454 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 SMART SM00354 1 73 7.4E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 Gene3D G3DSA:3.40.50.2300 166 326 8.3E-18 T 29-03-2018 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 Gene3D G3DSA:3.40.50.2300 57 165 2.3E-25 T 29-03-2018 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 264 2.6E-13 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 29-03-2018 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.7E-147 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CPU03_RS04720 8d1359afe833cb5d935d08cb712e3421 334 SUPERFAMILY SSF53822 60 314 2.36E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS13430 38f004bab586257896380a7f6a7bd2fb 257 SUPERFAMILY SSF53474 9 252 1.5E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS13430 38f004bab586257896380a7f6a7bd2fb 257 Pfam PF12697 Alpha/beta hydrolase family 18 243 2.4E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS13430 38f004bab586257896380a7f6a7bd2fb 257 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 251 6.9E-77 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CPU03_RS13430 38f004bab586257896380a7f6a7bd2fb 257 Gene3D G3DSA:3.40.50.1820 3 253 9.5E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS13430 38f004bab586257896380a7f6a7bd2fb 257 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 12 252 33.402 T 29-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 SMART SM00871 126 291 5.7E-16 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 Pfam PF06445 GyrI-like small molecule binding domain 127 291 3.9E-20 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 Gene3D G3DSA:3.20.80.10 122 293 9.1E-24 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 SUPERFAMILY SSF46689 57 109 1.97E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 Pfam PF12833 Helix-turn-helix domain 27 105 4.1E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 Gene3D G3DSA:1.10.10.60 1 57 6.4E-14 T 29-03-2018 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 SUPERFAMILY SSF46689 5 55 1.22E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 SUPERFAMILY SSF55136 123 291 5.49E-44 T 29-03-2018 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 SMART SM00342 21 104 4.1E-34 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS05115 71a0fcb6e0df28b51c6730f062a192c1 294 Gene3D G3DSA:1.10.10.60 58 121 7.0E-14 T 29-03-2018 CPU03_RS05665 3d96ba5f0e69367d7763ab112bbfcf95 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 1.2E-55 T 29-03-2018 IPR019708 Bacteriophage HP1, Orf24 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 Gene3D G3DSA:3.40.50.10490 5 241 8.5E-98 T 29-03-2018 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.1E-109 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 Pfam PF00318 Ribosomal protein S2 9 224 1.0E-94 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.6E-38 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 SUPERFAMILY SSF52313 6 238 3.79E-97 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CPU03_RS04190 f2c723e3d295cb8d36f849a61eb0c5b6 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.918 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 Pfam PF02378 Phosphotransferase system, EIIC 18 351 5.6E-60 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 504 3.8E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 SUPERFAMILY SSF55604 447 517 2.35E-20 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 Pfam PF00367 phosphotransferase system, EIIB 448 480 1.3E-16 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 458 475 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS15200 410f5f3b279647df9b5d058fc38bae70 521 Gene3D G3DSA:3.30.1360.60 443 518 3.8E-25 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 SUPERFAMILY SSF54980 398 512 1.01E-26 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:3.40.50.300 68 191 3.1E-29 T 29-03-2018 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:2.40.30.10 192 302 2.2E-21 T 29-03-2018 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Pfam PF00679 Elongation factor G C-terminus 396 476 6.4E-22 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:3.40.50.300 2 67 9.1E-11 T 29-03-2018 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:2.40.50.250 483 573 8.9E-39 T 29-03-2018 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 8.2E-25 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.1E-56 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.7E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.6E-292 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 SUPERFAMILY SSF54980 302 387 1.8E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 SUPERFAMILY SSF52540 3 207 6.64E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 SUPERFAMILY SSF50447 151 299 9.94E-33 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:3.30.70.240 401 482 7.0E-19 T 29-03-2018 CPU03_RS07865 735c3e9e49c6e297f86b36fdf35f902f 606 Gene3D G3DSA:3.30.70.870 303 400 1.1E-32 T 29-03-2018 CPU03_RS17135 32cac4903a371eaccc0d7fd9aace5f06 211 Pfam PF12477 Sex factor F TraW protein N terminal 13 32 1.2E-4 T 29-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CPU03_RS17135 32cac4903a371eaccc0d7fd9aace5f06 211 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 8 203 6.4E-69 T 29-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 SMART SM00345 14 73 5.0E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 SUPERFAMILY SSF46785 4 83 1.21E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 2.5E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 SUPERFAMILY SSF64288 61 237 2.67E-37 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 Pfam PF07702 UTRA domain 94 232 7.5E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 9 239 7.2E-114 T 29-03-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 SMART SM00866 94 233 2.0E-25 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 Gene3D G3DSA:3.40.1410.10 73 239 7.6E-30 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS15415 63c9b3494a0f21ac91c036828e5f792a 239 Gene3D G3DSA:1.10.10.10 2 72 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 468 482 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 602 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 623 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 687 699 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 683 1.2E-29 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Pfam PF00403 Heavy-metal-associated domain 86 142 2.6E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Gene3D G3DSA:3.30.70.100 71 155 1.2E-14 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 217 766 5.2E-170 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF81665 713 752 3.79E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF81665 368 462 3.79E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF81665 220 271 3.79E-17 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Pfam PF00122 E1-E2 ATPase 268 448 8.1E-44 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Gene3D G3DSA:1.20.1110.10 162 490 8.9E-37 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF55008 81 145 1.13E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF56784 563 764 1.92E-51 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF56784 466 486 1.92E-51 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Pfam PF00702 haloacid dehalogenase-like hydrolase 464 677 1.9E-41 T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 637 653 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 695 720 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 680 1.4E-5 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 ProSitePatterns PS01229 Hypothetical cof family signature 2. 664 686 - T 29-03-2018 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Gene3D G3DSA:3.40.1110.10 491 592 7.5E-26 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 470 476 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 SUPERFAMILY SSF81653 270 367 8.11E-18 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 240 743 1.3E-73 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS07295 872b10d2b8608fd6f07254587a578464 770 Gene3D G3DSA:3.40.50.1000 593 731 5.0E-39 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05640 3a7dace1de90b4706bff593226f5163b 89 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 88 2.0E-18 T 29-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CPU03_RS05640 3a7dace1de90b4706bff593226f5163b 89 Gene3D G3DSA:3.30.2220.10 3 88 2.2E-19 T 29-03-2018 CPU03_RS05640 3a7dace1de90b4706bff593226f5163b 89 Pfam PF10963 Phage tail assembly chaperone 7 89 7.8E-31 T 29-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.725 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 Gene3D G3DSA:3.10.20.80 10 86 9.4E-33 T 29-03-2018 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 5.6E-76 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 Gene3D G3DSA:3.30.110.10 87 180 3.9E-35 T 29-03-2018 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 SUPERFAMILY SSF54364 13 86 5.36E-29 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 29-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 3.7E-37 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.1E-31 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS16805 ea847ccf8240b136b5e78bf20412acde 180 SUPERFAMILY SSF55200 90 179 7.85E-35 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CPU03_RS06165 74fa939ede6e0072b4c9efa34d2ef64f 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 5.9E-64 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS06165 74fa939ede6e0072b4c9efa34d2ef64f 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 37.387 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS06165 74fa939ede6e0072b4c9efa34d2ef64f 210 SUPERFAMILY SSF55068 10 207 7.46E-79 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS06165 74fa939ede6e0072b4c9efa34d2ef64f 210 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 2.0E-63 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS06165 74fa939ede6e0072b4c9efa34d2ef64f 210 Gene3D G3DSA:3.30.1060.10 28 203 3.7E-73 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Gene3D G3DSA:3.40.50.300 259 460 1.1E-30 T 29-03-2018 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Pfam PF02954 Bacterial regulatory protein, Fis family 549 588 1.5E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 SMART SM00382 292 436 1.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 SMART SM00091 160 226 0.0041 T 29-03-2018 IPR000014 PAS domain CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Gene3D G3DSA:3.30.450.20 118 258 2.3E-4 T 29-03-2018 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Gene3D G3DSA:1.10.10.60 531 592 4.3E-16 T 29-03-2018 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Gene3D G3DSA:1.10.8.60 461 519 4.8E-18 T 29-03-2018 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 SUPERFAMILY SSF52540 272 513 1.04E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 Pfam PF00158 Sigma-54 interaction domain 272 439 6.9E-70 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS09705 d98e22356f26a3b0b338cbdce54f8d7a 593 SUPERFAMILY SSF46689 541 590 5.83E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Gene3D G3DSA:3.40.1390.10 1 89 6.6E-28 T 29-03-2018 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 444 4.2E-138 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Gene3D G3DSA:3.90.190.20 313 458 8.8E-36 T 29-03-2018 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Gene3D G3DSA:3.40.1190.10 90 310 1.1E-57 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Pfam PF08245 Mur ligase middle domain 106 293 6.9E-48 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 33.631 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 393 7.1E-13 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 SUPERFAMILY SSF63418 1 96 2.35E-28 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 SUPERFAMILY SSF53623 100 311 7.72E-57 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 Pfam PF01225 Mur ligase family, catalytic domain 26 92 2.9E-10 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS04690 dddf15920a178a4d15b686a694614f27 458 SUPERFAMILY SSF53244 314 445 5.19E-35 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS03095 3f330fea0d857759892c0e77b1c4a53c 376 PIRSF PIRSF004925 1 375 1.1E-106 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter CPU03_RS03095 3f330fea0d857759892c0e77b1c4a53c 376 Gene3D G3DSA:1.20.1250.20 190 373 2.5E-8 T 29-03-2018 CPU03_RS03095 3f330fea0d857759892c0e77b1c4a53c 376 SUPERFAMILY SSF103473 6 370 3.92E-35 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS03095 3f330fea0d857759892c0e77b1c4a53c 376 Pfam PF12832 MFS_1 like family 8 359 3.2E-48 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain CPU03_RS03095 3f330fea0d857759892c0e77b1c4a53c 376 Gene3D G3DSA:1.20.1250.20 2 189 4.4E-13 T 29-03-2018 CPU03_RS08080 c075d5500e4d9336c656a1957224a886 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.7E-38 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CPU03_RS08080 c075d5500e4d9336c656a1957224a886 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.234 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CPU03_RS08080 c075d5500e4d9336c656a1957224a886 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 7.3E-61 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CPU03_RS08080 c075d5500e4d9336c656a1957224a886 156 SUPERFAMILY SSF81573 63 121 3.79E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CPU03_RS08080 c075d5500e4d9336c656a1957224a886 156 Gene3D G3DSA:1.20.5.620 62 122 1.4E-15 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.645 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 3.5E-146 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 Gene3D G3DSA:3.90.226.10 12 288 1.3E-69 T 29-03-2018 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 SUPERFAMILY SSF52096 25 282 7.46E-86 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 Pfam PF01039 Carboxyl transferase domain 56 239 1.6E-17 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 3.9E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 3.9E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 3.9E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 3.9E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS13170 68e7a8a9f74671ba5fab0492f50d5b4e 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 3.9E-37 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:3.30.365.10 470 638 2.9E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 SMART SM01008 186 298 7.3E-32 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:3.30.365.10 364 469 3.1E-32 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:3.30.365.10 646 794 1.6E-34 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 SUPERFAMILY SSF47741 84 188 4.45E-19 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 PIRSF PIRSF000127 354 947 9.6E-69 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 PIRSF PIRSF000127 140 328 3.2E-14 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 PIRSF PIRSF000127 50 146 8.2E-4 T 29-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:3.30.365.10 795 955 1.0E-42 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Pfam PF01799 [2Fe-2S] binding domain 73 145 5.4E-11 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 SUPERFAMILY SSF56003 302 318 4.71E-166 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 SUPERFAMILY SSF56003 354 955 4.71E-166 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 29-03-2018 IPR017699 Molybdenum-binding protein YgfN/XdhD CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 SUPERFAMILY SSF54665 162 317 1.14E-43 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:3.90.1170.50 180 298 2.3E-25 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 1.7E-148 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Gene3D G3DSA:1.10.150.120 73 179 3.6E-17 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS09765 e63ef895b7462df5931ce62701e4dbba 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 296 8.0E-27 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS01745 ade22651beb249c1e5aab8bdcf45211c 211 PIRSF PIRSF002884 3 211 1.9E-85 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CPU03_RS01745 ade22651beb249c1e5aab8bdcf45211c 211 Pfam PF04344 Chemotaxis phosphatase, CheZ 13 211 1.9E-76 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CPU03_RS01745 ade22651beb249c1e5aab8bdcf45211c 211 Gene3D G3DSA:1.20.5.590 4 31 3.4E-13 T 29-03-2018 CPU03_RS01745 ade22651beb249c1e5aab8bdcf45211c 211 Gene3D G3DSA:1.10.287.500 33 165 7.9E-19 T 29-03-2018 CPU03_RS01745 ade22651beb249c1e5aab8bdcf45211c 211 SUPERFAMILY SSF75708 11 210 2.09E-66 T 29-03-2018 CPU03_RS13770 22c47cda53af9299d1f13e44cabf23d5 404 Pfam PF07690 Major Facilitator Superfamily 21 356 1.6E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS13770 22c47cda53af9299d1f13e44cabf23d5 404 SUPERFAMILY SSF103473 18 391 2.75E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS13770 22c47cda53af9299d1f13e44cabf23d5 404 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 391 2.0E-162 T 29-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CPU03_RS13770 22c47cda53af9299d1f13e44cabf23d5 404 Gene3D G3DSA:1.20.1250.20 212 400 1.9E-27 T 29-03-2018 CPU03_RS13770 22c47cda53af9299d1f13e44cabf23d5 404 Gene3D G3DSA:1.20.1250.20 4 206 1.4E-20 T 29-03-2018 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 2.2E-53 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Gene3D G3DSA:3.40.50.970 167 519 5.4E-94 T 29-03-2018 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Gene3D G3DSA:1.10.287.1150 82 166 1.7E-23 T 29-03-2018 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 5.0E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 SUPERFAMILY SSF52518 120 552 1.43E-88 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Gene3D G3DSA:3.40.50.970 593 801 2.9E-56 T 29-03-2018 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 SMART SM00861 593 786 2.6E-61 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Pfam PF00676 Dehydrogenase E1 component 221 512 4.2E-52 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 PIRSF PIRSF000157 1 934 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 SUPERFAMILY SSF52518 576 793 3.43E-51 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS12530 a12c119363069ae534ca2a415c803475 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.0E-15 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.8E-8 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.9E-9 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Gene3D G3DSA:2.160.10.10 1 196 2.8E-43 T 29-03-2018 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 SUPERFAMILY SSF51161 2 262 2.71E-81 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 5.0E-31 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.2E-110 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Gene3D G3DSA:1.20.1180.10 197 262 8.2E-26 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 PIRSF PIRSF000456 5 262 1.1E-109 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS04130 c68e93f35262f5c61b5598946f25fe9b 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.172 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 8.2E-94 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.8E-75 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 29-03-2018 IPR024002 Formate/nitrite transporter, conserved site CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 Gene3D G3DSA:1.20.1080.10 12 285 2.0E-78 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CPU03_RS14225 ea024851e20d1ca00144fdb914febc4c 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.2E-127 T 29-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 Gene3D G3DSA:1.10.287.130 201 253 6.6E-9 T 29-03-2018 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 SUPERFAMILY SSF55874 260 424 3.8E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 SMART SM00388 211 271 1.5E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 SUPERFAMILY SSF47384 194 271 5.1E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 SMART SM00304 158 210 1.5E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 423 2.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 SMART SM00387 315 425 6.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 Gene3D G3DSA:3.30.565.10 254 423 7.6E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16570 70c289dabf02a5ac9473ef2ac23735fd 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.3E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Gene3D G3DSA:3.30.980.10 65 150 1.8E-21 T 29-03-2018 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Gene3D G3DSA:3.30.980.10 151 222 2.1E-15 T 29-03-2018 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 SUPERFAMILY SSF55186 63 241 4.19E-63 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Gene3D G3DSA:3.30.930.10 223 531 3.1E-121 T 29-03-2018 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 5.1E-14 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 1.0E-50 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Gene3D G3DSA:3.10.20.30 1 64 2.7E-19 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 SMART SM00863 170 219 6.7E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 SUPERFAMILY SSF52954 530 636 1.81E-33 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.933 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Pfam PF03129 Anticodon binding domain 541 630 2.7E-22 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 SUPERFAMILY SSF81271 3 61 6.98E-17 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 3.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 3.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 3.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 3.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 3.0E-54 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Gene3D G3DSA:3.40.50.800 532 642 3.0E-28 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 SUPERFAMILY SSF55681 243 525 8.87E-97 T 29-03-2018 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 7.4E-244 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CPU03_RS16810 0888b213c2a4b6f0a082e995b1e7a661 642 Pfam PF02824 TGS domain 4 61 1.7E-13 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CPU03_RS04890 dbf1974678ae7dffe7f838bca8ed27a9 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 5.4E-98 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CPU03_RS04890 dbf1974678ae7dffe7f838bca8ed27a9 317 Gene3D G3DSA:3.40.50.2300 1 284 4.4E-6 T 29-03-2018 CPU03_RS04890 dbf1974678ae7dffe7f838bca8ed27a9 317 Pfam PF02401 LytB protein 3 283 5.1E-92 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CPU03_RS04890 dbf1974678ae7dffe7f838bca8ed27a9 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.988 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 289 7.4E-144 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 42.889 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 SMART SM00881 4 100 9.6E-34 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.1E-39 T 29-03-2018 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.1E-39 T 29-03-2018 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 2.1E-39 T 29-03-2018 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 2.1E-39 T 29-03-2018 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 PIRSF PIRSF001553 1 290 5.1E-132 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 SUPERFAMILY SSF52210 124 288 1.57E-57 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 Pfam PF02629 CoA binding domain 6 99 7.9E-30 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 SUPERFAMILY SSF51735 1 123 2.46E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 Gene3D G3DSA:3.40.50.261 121 290 3.6E-57 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 Gene3D G3DSA:3.40.50.720 1 120 6.8E-43 T 29-03-2018 CPU03_RS12545 a335c6edc32ae7c51353882d42fe9e24 290 Pfam PF00549 CoA-ligase 152 272 7.4E-21 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Pfam PF13155 Toprim-like 263 348 6.3E-16 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Hamap MF_00974 DNA primase [dnaG]. 4 579 30.056 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 4.3E-40 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Gene3D G3DSA:1.20.50.20 370 417 3.3E-20 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 3.6E-13 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SUPERFAMILY SSF57783 4 100 1.34E-36 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.2E-147 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SMART SM00766 450 575 2.5E-46 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Gene3D G3DSA:3.90.980.10 109 240 8.3E-44 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SUPERFAMILY SSF117023 447 578 6.8E-42 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.0E-34 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Gene3D G3DSA:1.10.860.10 436 581 4.0E-37 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SUPERFAMILY SSF56731 116 428 8.63E-112 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SMART SM00493 259 330 5.1E-21 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 SMART SM00400 36 90 2.3E-38 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Gene3D G3DSA:3.40.1360.20 256 369 1.1E-32 T 29-03-2018 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Pfam PF01807 CHC2 zinc finger 7 100 3.6E-41 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CPU03_RS05570 64540851efa7544d853ebe290b234e41 582 Gene3D G3DSA:3.90.580.10 1 102 3.3E-36 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 6.6E-32 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 PIRSF PIRSF004669 1 89 4.6E-32 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-23 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-23 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-23 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CPU03_RS14370 062e96ba56738fdcba777dea1b364ee5 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.9E-29 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 SUPERFAMILY SSF48256 3 422 1.7E-168 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 Gene3D G3DSA:1.10.580.10 26 280 5.4E-89 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 3.4E-236 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 2.5E-133 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PIRSF PIRSF001369 37 427 1.2E-174 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 Gene3D G3DSA:1.10.230.10 281 378 9.2E-37 T 29-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 218 233 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 295 315 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 164 177 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 240 268 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 358 374 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS12505 b07c473a99d7c66c0a51dce799d7fe2e 427 PRINTS PR00143 Citrate synthase signature 378 392 1.9E-56 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 Pfam PF00266 Aminotransferase class-V 5 368 7.2E-89 T 29-03-2018 IPR000192 Aminotransferase class V domain CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 Gene3D G3DSA:3.90.1150.10 233 404 3.9E-52 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.7E-232 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 Gene3D G3DSA:3.40.640.10 1 232 1.9E-53 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.699 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 SUPERFAMILY SSF53383 5 390 3.82E-116 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS11290 ec5f32c7de1d79f5090738905bb13565 404 PIRSF PIRSF005572 2 384 7.8E-140 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 136 163 5.5E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 48 68 5.5E-7 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 Gene3D G3DSA:1.10.8.60 172 238 1.9E-13 T 29-03-2018 CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 Gene3D G3DSA:3.40.50.300 17 169 4.9E-10 T 29-03-2018 CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 10 238 57.785 T 29-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 11 236 1.2E-85 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 Pfam PF00308 Bacterial dnaA protein 21 217 1.8E-16 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CPU03_RS02920 2bdf97b8084ad67fc83ade7a9ca10616 238 SUPERFAMILY SSF52540 21 216 6.17E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05455 5c32e9141bb3a0e6c67f49a884b5b0fe 136 PIRSF PIRSF029225 2 128 2.4E-40 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS05455 5c32e9141bb3a0e6c67f49a884b5b0fe 136 Pfam PF03603 DNA polymerase III psi subunit 3 124 1.1E-39 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS05455 5c32e9141bb3a0e6c67f49a884b5b0fe 136 SUPERFAMILY SSF102220 29 132 7.72E-28 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS05455 5c32e9141bb3a0e6c67f49a884b5b0fe 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 37 122 7.0E-14 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS05455 5c32e9141bb3a0e6c67f49a884b5b0fe 136 Gene3D G3DSA:3.40.50.10220 35 126 6.0E-28 T 29-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS01535 b69b1b2ef48b0111818bf7514e99df44 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.646 T 29-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CPU03_RS01535 b69b1b2ef48b0111818bf7514e99df44 245 SMART SM00481 4 78 3.4E-14 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CPU03_RS01535 b69b1b2ef48b0111818bf7514e99df44 245 SUPERFAMILY SSF89550 3 241 3.92E-62 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CPU03_RS01535 b69b1b2ef48b0111818bf7514e99df44 245 Pfam PF02811 PHP domain 5 116 1.2E-7 T 29-03-2018 IPR004013 PHP domain GO:0003824 CPU03_RS01535 b69b1b2ef48b0111818bf7514e99df44 245 Gene3D G3DSA:3.20.20.140 6 234 1.7E-36 T 29-03-2018 CPU03_RS01735 67ae7a3a8cc215183e598be0121f0230 190 Pfam PF09335 SNARE associated Golgi protein 24 144 2.5E-19 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 Pfam PF08220 DeoR-like helix-turn-helix domain 8 43 2.9E-7 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 Pfam PF00455 DeoR C terminal sensor domain 87 238 1.6E-29 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 SMART SM01134 78 239 9.4E-39 T 29-03-2018 CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 Gene3D G3DSA:3.40.50.1360 86 243 2.5E-17 T 29-03-2018 CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 SUPERFAMILY SSF100950 87 239 9.21E-14 T 29-03-2018 CPU03_RS15090 98a6453d98909f2824ed00de1137729f 267 Gene3D G3DSA:1.10.10.10 1 44 5.8E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.809 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 SUPERFAMILY SSF52540 11 205 1.16E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 5.0E-41 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 9.5E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 9.5E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 Pfam PF07650 KH domain 209 285 3.0E-20 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 Gene3D G3DSA:3.30.300.20 187 300 7.8E-44 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 Gene3D G3DSA:3.40.50.300 10 186 5.9E-32 T 29-03-2018 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 4.6E-118 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 SUPERFAMILY SSF54814 182 297 7.19E-42 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CPU03_RS11765 4bd11e0385608f7b0e2f416ee9068067 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.1E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Gene3D G3DSA:3.30.565.10 17 220 1.2E-73 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Gene3D G3DSA:3.40.50.670 402 801 9.9E-109 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SMART SM00387 31 175 3.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 111.069 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Pfam PF00204 DNA gyrase B 221 390 1.2E-60 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 4.5E-71 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SUPERFAMILY SSF55874 4 220 1.26E-76 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 803 0.0 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SUPERFAMILY SSF54211 221 392 9.86E-63 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Pfam PF01751 Toprim domain 419 531 3.7E-18 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SUPERFAMILY SSF56719 730 795 1.28E-86 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SUPERFAMILY SSF56719 394 560 1.28E-86 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 1.8E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Gene3D G3DSA:3.30.230.10 221 392 1.5E-65 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 SMART SM00433 35 797 1.3E-279 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 7.0E-30 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS08220 4173d7d0f789b947f9803f299a5e6159 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.8E-80 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS09110 a217afede7671943126d50a339dc35ab 259 SUPERFAMILY SSF53474 4 252 1.21E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS09110 a217afede7671943126d50a339dc35ab 259 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 2.0E-96 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CPU03_RS09110 a217afede7671943126d50a339dc35ab 259 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 44.465 T 29-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CPU03_RS09110 a217afede7671943126d50a339dc35ab 259 Pfam PF00561 alpha/beta hydrolase fold 16 242 3.6E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS09110 a217afede7671943126d50a339dc35ab 259 Gene3D G3DSA:3.40.50.1820 2 255 6.1E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.6E-295 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.366 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 Gene3D G3DSA:1.10.10.10 541 629 0.0077 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 Gene3D G3DSA:3.50.50.60 5 264 1.7E-73 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 SMART SM01228 546 617 1.4E-43 T 29-03-2018 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 SUPERFAMILY SSF51905 97 261 2.95E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 SUPERFAMILY SSF51905 7 66 2.95E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 Pfam PF13932 GidA associated domain 403 616 1.1E-77 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CPU03_RS08055 2b3ae01873f852c62b2edad9786c4e01 629 Pfam PF01134 Glucose inhibited division protein A 8 397 7.3E-165 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CPU03_RS07285 d651fcdd922dae4bb74e28419e0d6d5f 377 Pfam PF01103 Surface antigen 114 377 1.2E-9 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CPU03_RS07285 d651fcdd922dae4bb74e28419e0d6d5f 377 Gene3D G3DSA:2.40.160.50 62 377 8.4E-35 T 29-03-2018 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 6.2E-81 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 Gene3D G3DSA:3.40.50.150 2 209 3.2E-53 T 29-03-2018 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 Gene3D G3DSA:1.10.8.100 210 264 1.1E-21 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 SUPERFAMILY SSF53335 17 266 1.93E-78 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 4.7E-89 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.146 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CPU03_RS04825 d38644c47c75a7cc7d53c649b0459c90 271 SMART SM00650 25 198 3.1E-80 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 23.958 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 Gene3D G3DSA:1.10.10.610 1 71 4.6E-34 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 4.0E-24 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 PIRSF PIRSF006169 1 74 2.8E-35 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 SUPERFAMILY SSF118001 1 72 2.35E-27 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09085 b5e30d5e3a0f3f5f45e21918371ebff0 74 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 69 1.5E-33 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 CPU03_RS09345 46129ab0ae0fff2449203aa532a4c9d0 119 Gene3D G3DSA:3.40.1260.10 1 119 9.1E-21 T 29-03-2018 CPU03_RS09345 46129ab0ae0fff2449203aa532a4c9d0 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 33.616 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF CPU03_RS09345 46129ab0ae0fff2449203aa532a4c9d0 119 SUPERFAMILY SSF75169 1 119 2.88E-35 T 29-03-2018 IPR027396 DsrEFH-like CPU03_RS09345 46129ab0ae0fff2449203aa532a4c9d0 119 Pfam PF02635 DsrE/DsrF-like family 4 119 2.9E-25 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CPU03_RS09345 46129ab0ae0fff2449203aa532a4c9d0 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 3.3E-46 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 Gene3D G3DSA:3.40.630.10 191 454 2.0E-54 T 29-03-2018 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 Gene3D G3DSA:3.40.630.10 1 106 1.0E-18 T 29-03-2018 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 23 451 1.3E-88 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 SUPERFAMILY SSF53187 3 95 4.44E-85 T 29-03-2018 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 SUPERFAMILY SSF53187 231 451 4.44E-85 T 29-03-2018 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 SUPERFAMILY SSF101821 96 231 2.84E-28 T 29-03-2018 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 84 100 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 117 137 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 153 170 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 280 298 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 418 433 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS01245 023d1790c2ac1ab257cb67dcffa6c8f6 472 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 324 340 1.9E-31 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Pfam PF01743 Poly A polymerase head domain 70 201 2.8E-39 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 27 468 38.48 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Gene3D G3DSA:1.10.3090.10 199 446 4.6E-42 T 29-03-2018 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 SUPERFAMILY SSF81891 199 436 1.57E-49 T 29-03-2018 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 229 287 5.6E-19 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Gene3D G3DSA:3.30.460.10 36 198 1.9E-53 T 29-03-2018 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 SUPERFAMILY SSF81301 41 197 3.16E-40 T 29-03-2018 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 39 470 1.1E-162 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CPU03_RS04415 603f18f6108779c8fe7f896898b1cfc0 477 Pfam PF12626 Polymerase A arginine-rich C-terminus 346 468 1.5E-42 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 3.0E-43 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 117 6.6E-43 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 Gene3D G3DSA:3.30.300.20 5 119 1.9E-34 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 SUPERFAMILY SSF89919 2 106 2.09E-34 T 29-03-2018 IPR023799 Ribosome-binding factor A domain CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 Pfam PF02033 Ribosome-binding factor A 7 111 1.9E-32 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CPU03_RS06010 8a7b8b2454205aaaa9c5dd912dbc8fb0 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 22.462 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CPU03_RS04220 1dc50033b1a866f6d9e24d7d01ce3828 264 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 49 63 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04220 1dc50033b1a866f6d9e24d7d01ce3828 264 Pfam PF00849 RNA pseudouridylate synthase 10 169 5.7E-32 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04220 1dc50033b1a866f6d9e24d7d01ce3828 264 Gene3D G3DSA:3.30.2350.10 1 236 7.9E-59 T 29-03-2018 CPU03_RS04220 1dc50033b1a866f6d9e24d7d01ce3828 264 SUPERFAMILY SSF55120 2 236 1.04E-59 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13680 4aa2dc48aa67277fac62fd6e0cf97618 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.4E-30 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CPU03_RS13680 4aa2dc48aa67277fac62fd6e0cf97618 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 4.6E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13680 4aa2dc48aa67277fac62fd6e0cf97618 218 SUPERFAMILY SSF161098 13 201 8.24E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13680 4aa2dc48aa67277fac62fd6e0cf97618 218 Gene3D G3DSA:1.10.3720.10 1 217 5.5E-45 T 29-03-2018 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.671 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Gene3D G3DSA:3.40.50.300 56 315 2.1E-68 T 29-03-2018 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 29-03-2018 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 SUPERFAMILY SSF52540 64 404 1.26E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.6E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 SMART SM01086 317 412 6.6E-34 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 SMART SM00994 12 51 1.0E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 1.2E-16 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 Gene3D G3DSA:1.10.8.60 317 409 2.5E-33 T 29-03-2018 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 5.1E-214 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CPU03_RS03340 16682aa642115bb20edee08a5b586dd1 423 SMART SM00382 111 408 3.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Gene3D G3DSA:3.20.20.60 366 684 2.0E-88 T 29-03-2018 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Gene3D G3DSA:1.10.274.10 147 246 3.4E-16 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 122 237 6.7E-10 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 364 653 6.8E-108 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Gene3D G3DSA:3.50.30.10 247 365 2.1E-17 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Gene3D G3DSA:3.30.1340.10 3 85 6.5E-14 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 2.9E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Gene3D G3DSA:3.40.930.10 685 831 9.6E-32 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 5.0E-20 T 29-03-2018 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 5.0E-20 T 29-03-2018 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 5.0E-20 T 29-03-2018 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 5.0E-20 T 29-03-2018 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 SUPERFAMILY SSF55594 5 89 6.02E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Pfam PF00381 PTS HPr component phosphorylation site 6 84 4.1E-12 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 180 677 1.2E-141 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 SUPERFAMILY SSF52009 236 355 5.76E-24 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 4.2E-31 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 SUPERFAMILY SSF55804 689 828 8.5E-30 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 SUPERFAMILY SSF51621 369 661 1.13E-95 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS14870 6b705f116075860608fe13a0678e58c1 833 SUPERFAMILY SSF47831 145 254 3.79E-17 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 Gene3D G3DSA:3.50.50.60 1 394 4.8E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 9.6E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 9.6E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 9.6E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 9.6E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 9.6E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 SUPERFAMILY SSF51905 10 323 4.67E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 Pfam PF01266 FAD dependent oxidoreductase 11 360 9.9E-55 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 538 4.1E-267 T 29-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CPU03_RS09995 8023b277013391988d0772987c76e19c 549 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 485 5.4E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 Pfam PF00072 Response regulator receiver domain 22 131 4.9E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 310 1.0E-47 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 SUPERFAMILY SSF55073 153 310 4.97E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 Gene3D G3DSA:3.40.50.2300 2 144 5.8E-35 T 29-03-2018 CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 Gene3D G3DSA:3.30.70.270 145 317 7.9E-52 T 29-03-2018 CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 SUPERFAMILY SSF52172 18 142 5.55E-39 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 308 1.4E-47 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 SMART SM00267 137 312 3.9E-64 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS15570 b7dec0d985b1cfb9dd01aca05066d720 318 SMART SM00448 19 131 4.7E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15920 74c54e870ffc955e1d51cc4e7b93d3a9 102 SUPERFAMILY SSF47413 28 101 9.73E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS15920 74c54e870ffc955e1d51cc4e7b93d3a9 102 Gene3D G3DSA:1.10.10.60 10 60 4.2E-8 T 29-03-2018 CPU03_RS15920 74c54e870ffc955e1d51cc4e7b93d3a9 102 Pfam PF01381 Helix-turn-helix 44 97 4.4E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS15920 74c54e870ffc955e1d51cc4e7b93d3a9 102 Gene3D G3DSA:3.30.1190.10 61 102 3.5E-10 T 29-03-2018 CPU03_RS15920 74c54e870ffc955e1d51cc4e7b93d3a9 102 SMART SM00530 41 100 3.9E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 SUPERFAMILY SSF47413 1 59 9.14E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Gene3D G3DSA:1.10.260.40 2 54 1.6E-20 T 29-03-2018 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Gene3D G3DSA:3.40.50.2300 177 335 2.0E-48 T 29-03-2018 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 SMART SM00354 1 71 7.8E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.9E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 3.1E-41 T 29-03-2018 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 SUPERFAMILY SSF53822 60 337 1.43E-94 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 61.079 T 29-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 CPU03_RS16235 ea53c960f3e03061832032dc5f1058b9 341 Gene3D G3DSA:3.40.50.2300 55 176 9.1E-31 T 29-03-2018 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 SUPERFAMILY SSF46955 1 126 1.36E-36 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 Gene3D G3DSA:1.10.1660.10 1 55 5.5E-22 T 29-03-2018 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 SMART SM00422 1 70 4.2E-28 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.9E-58 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.4E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-8 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 Pfam PF13411 MerR HTH family regulatory protein 1 67 3.5E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS03120 e67894de72705d4ec0b5011ec57f151a 137 Gene3D G3DSA:1.10.1660.10 56 134 2.6E-17 T 29-03-2018 CPU03_RS08275 18212146925aa17bd5cfdb69aff4b275 168 Pfam PF13508 Acetyltransferase (GNAT) domain 52 126 5.4E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS08275 18212146925aa17bd5cfdb69aff4b275 168 Gene3D G3DSA:3.40.630.30 2 88 3.3E-16 T 29-03-2018 CPU03_RS08275 18212146925aa17bd5cfdb69aff4b275 168 SUPERFAMILY SSF55729 5 132 3.43E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS08275 18212146925aa17bd5cfdb69aff4b275 168 Gene3D G3DSA:3.40.630.30 89 147 4.3E-11 T 29-03-2018 CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 SMART SM00843 1298 1363 2.3E-42 T 29-03-2018 IPR018541 FtsK gamma domain CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 Gene3D G3DSA:3.40.50.300 583 1234 2.8E-55 T 29-03-2018 CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 SUPERFAMILY SSF52540 957 1269 8.82E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 SUPERFAMILY SSF46785 1298 1362 4.49E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.9E-41 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 Pfam PF01580 FtsK/SpoIIIE family 983 1196 6.4E-73 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 Pfam PF09397 Ftsk gamma domain 1300 1360 4.4E-28 T 29-03-2018 IPR018541 FtsK gamma domain CPU03_RS14135 f62f6bccf9acb3da64a0f1f51807a1a8 1367 Gene3D G3DSA:1.10.10.10 1300 1354 5.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00500 9278247ca95910cc1de323a17399edca 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 56.515 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS00500 9278247ca95910cc1de323a17399edca 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.2E-38 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS00500 9278247ca95910cc1de323a17399edca 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.7E-111 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS00500 9278247ca95910cc1de323a17399edca 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.6E-31 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS00500 9278247ca95910cc1de323a17399edca 397 Gene3D G3DSA:3.40.50.720 27 199 9.5E-5 T 29-03-2018 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 SMART SM00893 7 183 4.2E-16 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 SUPERFAMILY SSF52402 7 173 7.67E-25 T 29-03-2018 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 Gene3D G3DSA:3.40.50.1220 186 313 2.2E-49 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 1.6E-29 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 SUPERFAMILY SSF52467 190 311 6.54E-42 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 57.55 T 29-03-2018 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 Gene3D G3DSA:3.40.50.620 2 181 1.2E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 Pfam PF01012 Electron transfer flavoprotein domain 19 168 5.9E-17 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CPU03_RS12110 c28c47b7f9430426b126246a2c39f1d3 313 PIRSF PIRSF000089 3 313 5.2E-83 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 Gene3D G3DSA:3.40.190.10 257 370 3.7E-6 T 29-03-2018 CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 Gene3D G3DSA:3.90.76.10 129 256 2.2E-18 T 29-03-2018 CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 SUPERFAMILY SSF53850 121 548 5.25E-62 T 29-03-2018 CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 308 1.8E-17 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 Gene3D G3DSA:1.10.10.10 2 81 5.8E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 6.8E-38 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CPU03_RS04770 e61f60b0e4f33fe3c59eef3e50793d2a 559 SUPERFAMILY SSF46785 4 56 3.27E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10430 f8c152c18e61b76f2cadd78d6d66c5d7 418 Pfam PF03606 C4-dicarboxylate anaerobic carrier 56 417 1.3E-21 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 Pfam PF03466 LysR substrate binding domain 86 287 9.9E-54 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 SUPERFAMILY SSF53850 86 288 5.84E-49 T 29-03-2018 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 Gene3D G3DSA:1.10.10.10 1 84 6.3E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 Gene3D G3DSA:3.40.190.10 88 176 1.4E-26 T 29-03-2018 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.1E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 Gene3D G3DSA:3.40.190.10 177 262 9.2E-23 T 29-03-2018 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 SUPERFAMILY SSF46785 2 109 4.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02470 62f0477b7faa2b48bf49722e72b9d322 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 PRINTS PR00990 Ribokinase signature 8 29 6.5E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 PRINTS PR00990 Ribokinase signature 35 54 6.5E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 PRINTS PR00990 Ribokinase signature 175 190 6.5E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 PRINTS PR00990 Ribokinase signature 219 230 6.5E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 PRINTS PR00990 Ribokinase signature 107 120 6.5E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 2.3E-111 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.262 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 Pfam PF00294 pfkB family carbohydrate kinase 5 296 1.2E-75 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 SUPERFAMILY SSF53613 5 304 7.64E-86 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS08000 dfe7e9074631800c31bdfbaf4d2cb058 309 Gene3D G3DSA:3.40.1190.20 2 309 1.8E-86 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS13880 35d6b942d7b0dc378c340bda0a9b4a65 426 PIRSF PIRSF006066 1 426 1.1E-128 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CPU03_RS13880 35d6b942d7b0dc378c340bda0a9b4a65 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 420 1.5E-133 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CPU03_RS13880 35d6b942d7b0dc378c340bda0a9b4a65 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 5.7E-105 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 SUPERFAMILY SSF52540 338 582 2.71E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 Pfam PF00005 ABC transporter 361 511 2.3E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 SUPERFAMILY SSF90123 14 327 6.67E-73 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 583 2.4E-256 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 SMART SM00382 370 557 5.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 Gene3D G3DSA:1.20.1560.10 3 330 1.9E-66 T 29-03-2018 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 Pfam PF00664 ABC transporter transmembrane region 28 297 3.7E-57 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS14275 effd6d3a03e3784dfcda4d943813ad3f 584 Gene3D G3DSA:3.40.50.300 331 584 4.7E-76 T 29-03-2018 CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 SMART SM00895 99 227 4.8E-18 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 SUPERFAMILY SSF48008 95 235 2.04E-20 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 SMART SM00345 15 74 2.3E-29 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.5E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 Pfam PF07729 FCD domain 99 226 3.0E-18 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 SUPERFAMILY SSF46785 6 77 1.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 Gene3D G3DSA:1.20.120.530 79 245 1.3E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS04565 e096de2cf74387d2cdde6922bcff5fb2 254 Gene3D G3DSA:1.10.10.10 2 76 4.2E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 SUPERFAMILY SSF48163 299 461 3.14E-46 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 461 8.3E-205 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 7.5E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 7.5E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 7.5E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 7.5E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 7.5E-28 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 SUPERFAMILY SSF52374 3 298 2.01E-114 T 29-03-2018 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 9.7E-121 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Gene3D G3DSA:1.10.10.350 366 471 9.2E-24 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Gene3D G3DSA:3.40.50.620 119 231 7.4E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Gene3D G3DSA:3.40.50.620 3 118 1.3E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.816 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Gene3D G3DSA:1.10.1160.10 232 314 1.9E-33 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CPU03_RS02640 2148294a29ea0e3b07771b15bc36f06a 471 Gene3D G3DSA:1.10.8.70 317 361 1.2E-14 T 29-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:1.20.1640.10 821 1030 1.2E-36 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82693 566 672 2.04E-29 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82866 806 1031 4.71E-44 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:3.30.70.1430 38 141 4.6E-30 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:3.30.70.1440 673 769 6.9E-21 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.5E-108 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82714 723 809 1.01E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:3.30.2090.10 180 275 4.1E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:3.30.70.1430 568 672 4.4E-24 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82693 136 182 1.75E-25 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82693 274 330 1.75E-25 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82866 297 498 5.36E-48 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82714 182 272 4.84E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 Gene3D G3DSA:1.20.1640.10 286 510 1.5E-43 T 29-03-2018 CPU03_RS02845 07b85df30658c0baf1a3d6e77c472e0b 1038 SUPERFAMILY SSF82693 39 131 4.84E-28 T 29-03-2018 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.734 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 Gene3D G3DSA:3.30.470.20 94 220 1.7E-44 T 29-03-2018 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 Gene3D G3DSA:3.30.200.20 1 93 5.9E-24 T 29-03-2018 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 SUPERFAMILY SSF56104 2 232 2.13E-74 T 29-03-2018 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 7.9E-79 T 29-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CPU03_RS02880 2ead9b3f98c1606bca58346e71101103 237 Pfam PF01259 SAICAR synthetase 7 231 7.7E-58 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 Gene3D G3DSA:1.20.1250.20 268 486 6.5E-14 T 29-03-2018 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 Gene3D G3DSA:1.20.1250.20 5 208 7.1E-26 T 29-03-2018 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 487 51.622 T 29-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 SUPERFAMILY SSF103473 17 210 4.32E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 SUPERFAMILY SSF103473 257 484 4.32E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 15 483 2.0E-139 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 150 162 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CPU03_RS16315 f7beb5d46ca935e4abc43e8008fb0ca8 487 Pfam PF00854 POT family 87 441 1.1E-89 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CPU03_RS09815 fbac7b57cf75e98d4069ce8a509a0df9 98 Pfam PF02680 Uncharacterized ArCR, COG1888 6 93 3.7E-31 T 29-03-2018 IPR003831 Protein of unknown function DUF211 CPU03_RS09815 fbac7b57cf75e98d4069ce8a509a0df9 98 Gene3D G3DSA:3.30.70.1340 21 84 5.1E-17 T 29-03-2018 CPU03_RS09815 fbac7b57cf75e98d4069ce8a509a0df9 98 SUPERFAMILY SSF160363 5 94 6.28E-29 T 29-03-2018 IPR023129 MTH889-like domain CPU03_RS09815 fbac7b57cf75e98d4069ce8a509a0df9 98 ProDom PD012512 ARCHAEA PH1931 STS176 TA1183 MJ0319 PRECURSOR TVG0378908 UNCHARACTERIZED DUF211 AF1549 16 92 2.0E-16 T 29-03-2018 IPR003831 Protein of unknown function DUF211 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 SMART SM00245 327 532 1.2E-77 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 668 3.2E-39 T 29-03-2018 IPR020992 Tail specific protease, C-terminal CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 552 1.5E-122 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 SUPERFAMILY SSF52096 165 265 4.14E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 SUPERFAMILY SSF52096 351 543 4.14E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Pfam PF03572 Peptidase family S41 357 530 1.1E-52 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 SMART SM00228 246 324 2.2E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Gene3D G3DSA:3.90.226.10 333 628 5.8E-57 T 29-03-2018 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Gene3D G3DSA:2.30.42.10 250 332 7.1E-16 T 29-03-2018 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 SUPERFAMILY SSF50156 216 343 2.56E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 321 1.4E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS16150 f306d51771e6aa242437e4e25977d3de 680 Gene3D G3DSA:3.30.750.44 157 249 2.6E-21 T 29-03-2018 CPU03_RS03445 9f432c37e5ec86312f91a25a2617c681 139 Pfam PF01029 NusB family 7 131 5.4E-37 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS03445 9f432c37e5ec86312f91a25a2617c681 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 8.7E-47 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CPU03_RS03445 9f432c37e5ec86312f91a25a2617c681 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 24.136 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 CPU03_RS03445 9f432c37e5ec86312f91a25a2617c681 139 SUPERFAMILY SSF48013 3 137 3.66E-44 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS03445 9f432c37e5ec86312f91a25a2617c681 139 Gene3D G3DSA:1.10.940.10 1 138 6.1E-44 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS05875 651bc1c11914f4a7a4e77b91a3b4d508 431 Gene3D G3DSA:1.20.1250.20 214 419 1.3E-22 T 29-03-2018 CPU03_RS05875 651bc1c11914f4a7a4e77b91a3b4d508 431 Gene3D G3DSA:1.20.1250.20 1 202 2.8E-39 T 29-03-2018 CPU03_RS05875 651bc1c11914f4a7a4e77b91a3b4d508 431 SUPERFAMILY SSF103473 3 416 2.09E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS05875 651bc1c11914f4a7a4e77b91a3b4d508 431 Pfam PF07690 Major Facilitator Superfamily 16 287 1.1E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 PIRSF PIRSF029745 1 559 1.7E-122 T 29-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 Gene3D G3DSA:3.10.20.310 84 154 6.1E-8 T 29-03-2018 CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 Gene3D G3DSA:2.40.160.50 180 559 1.1E-36 T 29-03-2018 CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 211 521 1.4E-95 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 Pfam PF08479 POTRA domain, ShlB-type 81 154 4.6E-19 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CPU03_RS03695 7f58916e882352d1618d7c4802fb2e03 559 Pfam PF17287 POTRA domain 156 206 8.5E-17 T 29-03-2018 IPR035251 ShlB, POTRA domain CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 Pfam PF07687 Peptidase dimerisation domain 224 304 2.7E-9 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 PIRSF PIRSF005962 1 422 6.0E-105 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 SUPERFAMILY SSF55031 221 327 1.83E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 Pfam PF01546 Peptidase family M20/M25/M40 105 417 5.2E-21 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 Gene3D G3DSA:3.40.630.10 1 315 1.9E-49 T 29-03-2018 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 SUPERFAMILY SSF53187 333 421 2.88E-59 T 29-03-2018 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 SUPERFAMILY SSF53187 86 234 2.88E-59 T 29-03-2018 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 SUPERFAMILY SSF53187 6 48 2.88E-59 T 29-03-2018 CPU03_RS01725 a18ec98df48ddfd93dad3212f62ac7b0 422 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 405 3.6E-84 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.009 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-22 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 Pfam PF00444 Ribosomal protein L36 1 38 8.6E-20 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 1.0E-9 T 29-03-2018 CPU03_RS09485 743bedb9fbefc8dfb105bbd4fd131ed2 38 SUPERFAMILY SSF57840 1 38 6.54E-17 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Gene3D G3DSA:3.40.1030.10 69 341 3.3E-81 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 5.0E-167 T 29-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 3.9E-51 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 SMART SM00941 350 424 6.3E-30 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 PIRSF PIRSF000478 1 439 3.3E-154 T 29-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 SUPERFAMILY SSF54680 337 439 7.59E-32 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 422 2.0E-23 T 29-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 5.4E-20 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 SUPERFAMILY SSF52418 72 334 4.84E-89 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.9E-230 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.653 T 29-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Gene3D G3DSA:1.20.970.10 3 67 8.3E-23 T 29-03-2018 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 Gene3D G3DSA:3.90.1170.30 342 429 4.8E-29 T 29-03-2018 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 SUPERFAMILY SSF47648 3 70 1.05E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05410 608301c42d68edc0a97902a79e14876d 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 29-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 Pfam PF00890 FAD binding domain 4 403 4.3E-59 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 419 47.496 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 PIRSF PIRSF000141 1 421 4.6E-164 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 416 1.2E-168 T 29-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 Gene3D G3DSA:3.50.50.60 1 421 5.5E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 SUPERFAMILY SSF51905 251 416 9.39E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10000 23bf1b813cf8bde23f1a324db5136432 421 SUPERFAMILY SSF51905 1 57 9.39E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.4E-303 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Gene3D G3DSA:2.40.240.10 344 464 1.0E-48 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.7E-61 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.971 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.8E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.8E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.8E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.8E-9 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 SUPERFAMILY SSF52374 10 337 3.22E-103 T 29-03-2018 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Gene3D G3DSA:3.40.50.620 159 260 2.1E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Gene3D G3DSA:3.40.50.620 28 158 3.0E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 6.1E-125 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Gene3D G3DSA:2.40.240.10 465 548 1.3E-33 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 Gene3D G3DSA:1.10.1160.10 261 338 2.5E-34 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CPU03_RS12380 9b9e716fa8353f0fe4f4cfbda030ba89 555 SUPERFAMILY SSF50715 340 548 6.8E-78 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 71.741 T 29-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 176 2.4E-40 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 SUPERFAMILY SSF143243 24 228 4.84E-59 T 29-03-2018 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 SUPERFAMILY SSF56762 224 598 4.45E-122 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 42.106 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Gene3D G3DSA:1.10.645.10 418 585 1.6E-29 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Gene3D G3DSA:1.10.645.10 210 417 4.0E-48 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-21 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 6.1E-176 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 3.6E-104 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 4.9E-43 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13315 267f65a06a960574a558725ac8c9a3a7 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 188 25.053 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.1E-43 T 29-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 Gene3D G3DSA:3.40.50.720 88 247 1.1E-27 T 29-03-2018 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 PIRSF PIRSF001499 1 373 2.3E-171 T 29-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 Pfam PF02153 Prephenate dehydrogenase 141 344 2.0E-26 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 SUPERFAMILY SSF51735 91 238 3.54E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 Pfam PF01817 Chorismate mutase type II 9 86 1.1E-19 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 SMART SM00830 9 89 1.3E-30 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 Gene3D G3DSA:1.10.3660.10 249 372 3.5E-29 T 29-03-2018 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 SUPERFAMILY SSF48600 4 88 1.7E-23 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 Gene3D G3DSA:1.20.59.10 2 87 6.1E-24 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11160 696fcf47007f99cb49788b87ab4995f0 373 SUPERFAMILY SSF48179 242 366 6.8E-38 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 51.909 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 SUPERFAMILY SSF52317 17 297 2.08E-99 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 PIRSF PIRSF000450 1 308 3.7E-144 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 Gene3D G3DSA:3.40.50.880 34 301 3.5E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.6E-132 T 29-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.9E-156 T 29-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CPU03_RS09660 ccaa2d86a2bd021aa82f05104be450e8 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 7.0E-121 T 29-03-2018 CPU03_RS15280 0915d482dd0fd64dbfaaae5c5fc00f44 314 Gene3D G3DSA:1.10.3720.10 1 296 3.1E-44 T 29-03-2018 CPU03_RS15280 0915d482dd0fd64dbfaaae5c5fc00f44 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 4.4E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15280 0915d482dd0fd64dbfaaae5c5fc00f44 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 312 3.7E-159 T 29-03-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 CPU03_RS15280 0915d482dd0fd64dbfaaae5c5fc00f44 314 SUPERFAMILY SSF161098 94 308 3.79E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Pfam PF01479 S4 domain 97 143 1.0E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Gene3D G3DSA:1.10.1050.10 1 101 2.0E-41 T 29-03-2018 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 5.5E-87 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.7E-32 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 SMART SM01390 3 95 3.6E-50 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.405 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Gene3D G3DSA:3.10.290.10 102 144 7.4E-16 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 Gene3D G3DSA:1.10.1050.10 145 206 1.5E-17 T 29-03-2018 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 SMART SM00363 96 160 1.2E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS09500 8a8149f3c009a18130db96c08393e010 206 SUPERFAMILY SSF55174 3 206 6.93E-73 T 29-03-2018 CPU03_RS16140 90500cd6fefff398a7eb36f3648b1866 163 SMART SM00065 23 161 1.1E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS16140 90500cd6fefff398a7eb36f3648b1866 163 SUPERFAMILY SSF55781 2 150 1.62E-39 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS16140 90500cd6fefff398a7eb36f3648b1866 163 Pfam PF13185 GAF domain 39 145 1.8E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS16140 90500cd6fefff398a7eb36f3648b1866 163 Gene3D G3DSA:3.30.450.40 2 154 3.6E-24 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Gene3D G3DSA:1.10.8.60 380 459 1.4E-19 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 293 308 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SMART SM00382 227 371 4.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Pfam PF00989 PAS fold 84 153 4.0E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 467 514 2.1E-28 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Gene3D G3DSA:3.40.50.300 202 379 3.9E-25 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SUPERFAMILY SSF52540 206 448 8.05E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SMART SM00091 80 146 0.0064 T 29-03-2018 IPR000014 PAS domain CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Gene3D G3DSA:3.30.450.20 83 185 1.8E-7 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Gene3D G3DSA:3.30.70.260 1 82 4.7E-11 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Gene3D G3DSA:1.10.10.60 460 515 2.4E-7 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 420 429 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SUPERFAMILY SSF55021 2 69 7.63E-7 T 29-03-2018 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SUPERFAMILY SSF46689 459 514 4.72E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 Pfam PF00158 Sigma-54 interaction domain 207 373 1.5E-62 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 SUPERFAMILY SSF55785 84 149 1.71E-6 T 29-03-2018 IPR000014 PAS domain CPU03_RS00415 b29d95d75f691a332d27c7616edbe1c8 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Pfam PF03895 YadA-like membrane anchor domain 275 331 5.9E-10 T 29-03-2018 IPR005594 YadA-like, C-terminal CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Gene3D G3DSA:2.150.10.10 30 101 1.2E-7 T 29-03-2018 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 SUPERFAMILY SSF101967 52 214 2.48E-25 T 29-03-2018 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Gene3D G3DSA:2.150.10.10 102 219 3.0E-26 T 29-03-2018 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 SUPERFAMILY SSF54523 205 212 2.51E-16 T 29-03-2018 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 SUPERFAMILY SSF54523 242 331 2.51E-16 T 29-03-2018 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Pfam PF05658 Head domain of trimeric autotransporter adhesin 121 144 1.1E-5 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 133 4.3E-4 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Pfam PF05658 Head domain of trimeric autotransporter adhesin 149 175 1.1E-5 T 29-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 CPU03_RS10690 131ff6d22d5a42d60177dd30c71aaac6 331 Gene3D G3DSA:3.30.1300.30 224 331 4.0E-21 T 29-03-2018 CPU03_RS01495 ee5ce6668cbe45d3a7f73e4ec8ad076f 187 Gene3D G3DSA:3.10.180.10 7 186 1.6E-69 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS01495 ee5ce6668cbe45d3a7f73e4ec8ad076f 187 Pfam PF06185 YecM protein 10 185 6.6E-67 T 29-03-2018 IPR010393 Protein of unknown function DUF991 CPU03_RS01495 ee5ce6668cbe45d3a7f73e4ec8ad076f 187 SUPERFAMILY SSF54593 4 185 3.04E-63 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS02435 a231e769c404b1e5c71004c8fc6ac3d6 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.2E-68 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CPU03_RS02435 a231e769c404b1e5c71004c8fc6ac3d6 193 Pfam PF00692 dUTPase 80 185 4.3E-9 T 29-03-2018 IPR029054 dUTPase-like CPU03_RS02435 a231e769c404b1e5c71004c8fc6ac3d6 193 Gene3D G3DSA:2.70.40.10 2 168 4.9E-45 T 29-03-2018 CPU03_RS02435 a231e769c404b1e5c71004c8fc6ac3d6 193 SUPERFAMILY SSF51283 1 193 6.15E-61 T 29-03-2018 IPR029054 dUTPase-like CPU03_RS02435 a231e769c404b1e5c71004c8fc6ac3d6 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.736 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82693 138 184 5.49E-21 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82693 271 328 5.49E-21 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82693 46 126 2.12E-20 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82866 294 505 1.01E-39 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 1.7E-229 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:3.30.70.1430 45 139 1.7E-20 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:3.30.70.1430 567 665 3.0E-7 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:1.20.1640.10 287 516 1.2E-43 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:1.20.1640.10 824 1051 2.0E-29 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:3.30.2090.10 183 271 4.0E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82714 723 806 9.02E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82866 807 1039 4.19E-43 T 29-03-2018 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 SUPERFAMILY SSF82714 185 269 4.58E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 Gene3D G3DSA:3.30.2090.10 723 809 1.0E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16205 bf5fefc2adfe663b14b52662f9b8af13 1052 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.0E-21 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS05490 8691356150ca6c0e90730cddf8b6283d 219 Gene3D G3DSA:3.90.870.10 4 219 1.6E-93 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS05490 8691356150ca6c0e90730cddf8b6283d 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 8.1E-84 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS05490 8691356150ca6c0e90730cddf8b6283d 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 2.2E-82 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS05490 8691356150ca6c0e90730cddf8b6283d 219 SUPERFAMILY SSF55821 7 213 9.16E-87 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS05490 8691356150ca6c0e90730cddf8b6283d 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.871 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 Gene3D G3DSA:3.40.718.10 1 340 1.1E-111 T 29-03-2018 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 136.583 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 PIRSF PIRSF002465 2 344 8.7E-121 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 Pfam PF02504 Fatty acid synthesis protein 5 331 1.5E-112 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 341 4.6E-126 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CPU03_RS14570 10dc2e0d794a23a5487e60ffba797d81 344 SUPERFAMILY SSF53659 4 339 1.15E-97 T 29-03-2018 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 SUPERFAMILY SSF46689 62 108 1.03E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 SUPERFAMILY SSF46689 13 60 2.24E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 4.7E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 4.7E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 SMART SM00342 25 108 5.1E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 Gene3D G3DSA:1.10.10.60 61 117 1.5E-14 T 29-03-2018 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 Gene3D G3DSA:1.10.10.60 9 60 8.9E-9 T 29-03-2018 CPU03_RS16490 3d93b8ac723125442501ef5d670b6318 119 Pfam PF12833 Helix-turn-helix domain 33 108 3.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 SUPERFAMILY SSF53328 5 207 1.83E-68 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 307 1.3E-111 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.0E-31 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 SUPERFAMILY SSF50486 208 306 6.12E-35 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.398 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 Pfam PF00551 Formyl transferase 6 183 1.2E-52 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 Gene3D G3DSA:3.10.25.10 210 311 5.5E-32 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS09545 0b16cb43e03085ac6c9a9ae698b16fde 315 Gene3D G3DSA:3.40.50.170 2 209 7.7E-71 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS11505 9fbd53b02e4d315a0778d94843b9f39d 288 Pfam PF01497 Periplasmic binding protein 40 240 2.8E-27 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CPU03_RS11505 9fbd53b02e4d315a0778d94843b9f39d 288 Gene3D G3DSA:3.40.50.1980 157 282 4.3E-19 T 29-03-2018 CPU03_RS11505 9fbd53b02e4d315a0778d94843b9f39d 288 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 16 282 48.438 T 29-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 CPU03_RS11505 9fbd53b02e4d315a0778d94843b9f39d 288 Gene3D G3DSA:3.40.50.1980 37 156 4.9E-30 T 29-03-2018 CPU03_RS11505 9fbd53b02e4d315a0778d94843b9f39d 288 SUPERFAMILY SSF53807 39 278 2.47E-54 T 29-03-2018 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 PIRSF PIRSF005246 1 1484 0.0 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 SUPERFAMILY SSF52540 22 224 2.16E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 SUPERFAMILY SSF52540 1268 1433 2.28E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 SUPERFAMILY SSF52540 21 55 2.28E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Pfam PF16330 MukB hinge domain 645 810 6.6E-73 T 29-03-2018 IPR032520 MukB, hinge domain CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 6.3E-15 T 29-03-2018 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Gene3D G3DSA:3.40.50.300 5 493 3.2E-11 T 29-03-2018 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Gene3D G3DSA:3.40.50.300 1158 1437 2.1E-4 T 29-03-2018 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 10.936 T 29-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Pfam PF04310 MukB N-terminal 2 227 1.4E-123 T 29-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Gene3D G3DSA:1.10.287.620 978 1157 4.8E-8 T 29-03-2018 CPU03_RS14345 c2719f48f7c959927551be811a858204 1485 Gene3D G3DSA:1.20.120.330 591 969 1.4E-4 T 29-03-2018 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 Gene3D G3DSA:1.20.1250.20 244 491 4.6E-19 T 29-03-2018 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 Gene3D G3DSA:1.20.1250.20 1 196 8.9E-30 T 29-03-2018 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 Pfam PF07690 Major Facilitator Superfamily 13 403 1.7E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 SUPERFAMILY SSF103473 4 190 2.49E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 SUPERFAMILY SSF103473 242 413 2.49E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 SUPERFAMILY SSF103473 462 488 2.49E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 2.4E-6 T 29-03-2018 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.4E-6 T 29-03-2018 CPU03_RS15195 c86ef77b8bd894ebad40d55f2b4b83eb 491 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 2.4E-6 T 29-03-2018 CPU03_RS02465 e32dedddec1c92fba317ed70601c29f2 493 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CPU03_RS02465 e32dedddec1c92fba317ed70601c29f2 493 Pfam PF00324 Amino acid permease 25 477 8.1E-140 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CPU03_RS02465 e32dedddec1c92fba317ed70601c29f2 493 PIRSF PIRSF006060 2 487 6.4E-77 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 Pfam PF02629 CoA binding domain 192 283 1.4E-6 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 SUPERFAMILY SSF52210 184 316 8.77E-17 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 Gene3D G3DSA:3.40.50.261 168 520 1.3E-30 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 Pfam PF00549 CoA-ligase 350 506 1.9E-50 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 SUPERFAMILY SSF52210 353 510 1.83E-10 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS15245 e8d547075dd249b52bbeb45a7bd24160 520 Gene3D G3DSA:3.40.50.720 66 167 5.4E-4 T 29-03-2018 CPU03_RS09335 e12db767cddb9b5363170824218b211e 238 Pfam PF08348 YheO-like PAS domain 29 137 2.8E-37 T 29-03-2018 IPR013559 YheO-like CPU03_RS09335 e12db767cddb9b5363170824218b211e 238 Pfam PF13309 HTH domain 171 228 7.0E-19 T 29-03-2018 CPU03_RS09335 e12db767cddb9b5363170824218b211e 238 Gene3D G3DSA:1.10.10.60 184 236 2.9E-5 T 29-03-2018 CPU03_RS09335 e12db767cddb9b5363170824218b211e 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 28 153 1.0E-61 T 29-03-2018 IPR013559 YheO-like CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 Gene3D G3DSA:3.90.25.10 182 308 5.7E-21 T 29-03-2018 CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 235 1.0E-46 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 308 48.386 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 307 8.6E-134 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 SUPERFAMILY SSF51735 1 305 2.94E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07580 3a06a07cf7e40ee93bb0d8361a960b63 309 Gene3D G3DSA:3.40.50.720 1 181 1.8E-21 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Pfam PF01568 Molydopterin dinucleotide binding domain 696 807 6.9E-27 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 62 80 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 518 535 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Pfam PF00384 Molybdopterin oxidoreductase 120 577 9.3E-107 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 117 6.1E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Gene3D G3DSA:3.90.55.10 540 611 2.6E-20 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Gene3D G3DSA:3.40.228.10 612 677 1.6E-12 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 732 759 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 SUPERFAMILY SSF53706 58 697 5.5E-177 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Gene3D G3DSA:2.20.25.90 51 122 4.9E-18 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Gene3D G3DSA:3.40.228.10 207 486 1.4E-65 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 Gene3D G3DSA:2.40.40.20 678 815 1.0E-33 T 29-03-2018 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 SMART SM00926 57 117 2.9E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 815 0.0 T 29-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CPU03_RS14155 900ee84ef8a1e9eed11093b0605e626c 815 SUPERFAMILY SSF50692 642 815 4.52E-39 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS04800 a5255cad18f6c03936d11592dddb50f9 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 76 90 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04800 a5255cad18f6c03936d11592dddb50f9 235 Pfam PF00849 RNA pseudouridylate synthase 38 185 2.0E-27 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04800 a5255cad18f6c03936d11592dddb50f9 235 SUPERFAMILY SSF55120 23 232 1.44E-62 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04800 a5255cad18f6c03936d11592dddb50f9 235 Gene3D G3DSA:3.30.2350.10 29 234 1.3E-59 T 29-03-2018 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 SUPERFAMILY SSF52949 1 184 2.18E-51 T 29-03-2018 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 1.6E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 1.6E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 1.6E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 1.6E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 1.6E-52 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 Gene3D G3DSA:3.40.630.10 170 500 6.0E-133 T 29-03-2018 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 40.97 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 1.1E-121 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.4E-33 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 SUPERFAMILY SSF53187 179 497 5.02E-124 T 29-03-2018 CPU03_RS10050 e2ba0897f911af63c2c8a6ddc2444031 503 Gene3D G3DSA:3.40.220.10 1 157 6.1E-30 T 29-03-2018 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.4E-40 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 SMART SM01387 8 88 1.1E-52 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.368 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-38 T 29-03-2018 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 Gene3D G3DSA:1.10.287.10 2 89 9.0E-37 T 29-03-2018 CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 SUPERFAMILY SSF47060 3 89 5.3E-35 T 29-03-2018 IPR009068 S15/NS1, RNA-binding CPU03_RS06000 908af8f61065d76caf7953dde230bd30 89 Pfam PF00312 Ribosomal protein S15 8 88 6.5E-38 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Gene3D G3DSA:1.10.40.30 376 433 3.1E-25 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.3E-69 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.858 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.3E-29 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.3E-29 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.3E-29 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.3E-29 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Gene3D G3DSA:1.10.275.10 2 107 1.4E-33 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 SUPERFAMILY SSF48557 3 456 1.88E-142 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.3E-23 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Pfam PF00206 Lyase 6 301 2.1E-94 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 Gene3D G3DSA:1.20.200.10 108 375 8.4E-94 T 29-03-2018 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CPU03_RS07800 60d1e25618bc708d74dc163a77acbd72 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.4E-205 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Pfam PF13247 4Fe-4S dicluster domain 90 186 6.0E-25 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 SUPERFAMILY SSF54862 26 283 1.36E-70 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Gene3D G3DSA:3.30.70.20 41 111 7.3E-19 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Gene3D G3DSA:3.30.70.20 151 251 4.8E-23 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Gene3D G3DSA:1.20.5.480 252 289 2.2E-20 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 131 142 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 5 287 2.9E-143 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Gene3D G3DSA:3.30.70.20 12 40 0.077 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Gene3D G3DSA:3.30.70.20 112 150 3.2E-16 T 29-03-2018 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 PIRSF PIRSF036298 1 310 5.9E-160 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CPU03_RS08895 eda2e3c2da6f5cdcca4da78d6eaa3ab7 316 Pfam PF09163 Formate dehydrogenase N, transmembrane 244 286 6.9E-18 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 329 346 7.2E-16 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 7.2E-16 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 248 260 7.2E-16 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 101 111 7.2E-16 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 158 169 7.2E-16 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 329 345 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 Pfam PF00267 Gram-negative porin 28 378 4.6E-145 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 SUPERFAMILY SSF56935 23 378 5.23E-80 T 29-03-2018 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 Gene3D G3DSA:2.40.160.10 32 378 6.0E-53 T 29-03-2018 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 283 302 1.4E-57 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 101 123 1.4E-57 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 156 178 1.4E-57 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 254 271 1.4E-57 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS02165 619b6857296dbc75868177882fbb94cd 378 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.4E-57 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 29-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 SUPERFAMILY SSF50249 5 82 6.0E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 Pfam PF00366 Ribosomal protein S17 10 76 1.6E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.339 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 Gene3D G3DSA:2.40.50.140 5 82 2.6E-35 T 29-03-2018 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.9E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.9E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.9E-14 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 9.0E-36 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09425 2cf67a84ca7f3957a1ec1e16740823c4 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 5.4E-39 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 SMART SM01400 4 121 5.7E-76 T 29-03-2018 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 SUPERFAMILY SSF53271 69 306 1.31E-66 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 3.7E-28 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.614 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 Gene3D G3DSA:3.40.50.2020 1 157 4.6E-66 T 29-03-2018 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 Gene3D G3DSA:3.40.50.2020 158 307 1.6E-41 T 29-03-2018 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 9.9E-126 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CPU03_RS01625 2e2e0898c4b5f91238a2cf8d63aeec17 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CPU03_RS05525 c3d1c4c853b701a621d4af1ca7a9fcdd 226 Gene3D G3DSA:1.20.58.220 112 225 0.0013 T 29-03-2018 CPU03_RS05525 c3d1c4c853b701a621d4af1ca7a9fcdd 226 Pfam PF01865 Protein of unknown function DUF47 7 224 7.2E-64 T 29-03-2018 IPR018445 Putative phosphate transport regulator CPU03_RS05525 c3d1c4c853b701a621d4af1ca7a9fcdd 226 SUPERFAMILY SSF109755 46 217 1.69E-14 T 29-03-2018 CPU03_RS05525 c3d1c4c853b701a621d4af1ca7a9fcdd 226 Gene3D G3DSA:1.20.58.220 15 110 0.28 T 29-03-2018 CPU03_RS05525 c3d1c4c853b701a621d4af1ca7a9fcdd 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 5 226 2.4E-62 T 29-03-2018 IPR002727 Protein of unknown function DUF47 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:3.40.50.970 793 1171 3.8E-104 T 29-03-2018 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SUPERFAMILY SSF52922 256 407 3.45E-41 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF10371 Domain of unknown function 627 678 2.1E-23 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SUPERFAMILY SSF52518 794 1170 5.63E-114 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.9E-81 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 266 350 2.0E-12 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:3.40.50.920 255 416 4.5E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SUPERFAMILY SSF53323 417 668 8.5E-70 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:4.10.780.10 634 668 1.0E-15 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SUPERFAMILY SSF54862 665 839 5.86E-21 T 29-03-2018 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SUPERFAMILY SSF52518 2 254 6.28E-74 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 1.5E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 8.8E-8 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 SMART SM00890 622 679 6.3E-30 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:3.40.50.970 1 254 4.4E-51 T 29-03-2018 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:3.40.920.10 417 620 1.2E-49 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 607 1.2E-29 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 Gene3D G3DSA:3.30.70.20 669 791 2.3E-28 T 29-03-2018 CPU03_RS16650 3ac21148cae0a1672547ab07869a4a05 1177 PIRSF PIRSF000159 1 1177 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.1E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Gene3D G3DSA:3.40.50.300 1 80 2.6E-8 T 29-03-2018 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 SUPERFAMILY SSF52540 3 301 9.33E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-175 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 SUPERFAMILY SSF81271 279 359 4.58E-36 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 PIRSF PIRSF006641 1 363 4.9E-158 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Gene3D G3DSA:3.10.20.30 263 362 4.2E-46 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.713 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Gene3D G3DSA:1.10.150.300 110 200 1.3E-28 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CPU03_RS01645 c007af5e818399cd93ee76b91640692f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-39 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CPU03_RS00480 e9a3f8bf61bb778b9a51680a4657d71e 271 SUPERFAMILY SSF52540 5 249 1.81E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00480 e9a3f8bf61bb778b9a51680a4657d71e 271 Pfam PF00005 ABC transporter 31 178 1.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS00480 e9a3f8bf61bb778b9a51680a4657d71e 271 SMART SM00382 39 228 1.7E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS00480 e9a3f8bf61bb778b9a51680a4657d71e 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS00480 e9a3f8bf61bb778b9a51680a4657d71e 271 Gene3D G3DSA:3.40.50.300 2 259 6.3E-65 T 29-03-2018 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 Gene3D G3DSA:1.10.150.240 19 73 1.7E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 161 1.0E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 Gene3D G3DSA:3.40.50.1000 74 196 1.9E-25 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 188 2.8E-25 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 188 6.1E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 5.5E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 5.5E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 5.5E-5 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS00710 46cc7e005bde4026ea4356c3f32ff870 219 SUPERFAMILY SSF56784 6 213 2.36E-45 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 Pfam PF00293 NUDIX domain 4 114 3.1E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 5.0E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 5.0E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 Gene3D G3DSA:3.90.79.10 1 146 9.0E-29 T 29-03-2018 CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS14795 01c7bf313043c348c88932f564bc30b6 148 SUPERFAMILY SSF55811 2 134 4.74E-28 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 Pfam PF09190 DALR domain 341 402 1.4E-25 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 Gene3D G3DSA:1.20.120.640 306 392 2.6E-22 T 29-03-2018 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 Gene3D G3DSA:3.40.50.620 1 305 6.6E-92 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.0E-143 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 SUPERFAMILY SSF47323 316 460 7.85E-44 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.3E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.3E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.3E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.3E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 SMART SM00840 341 402 4.5E-30 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.9E-194 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.454 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CPU03_RS11885 b06a9d02486e9f0c32892e72bafc8960 461 SUPERFAMILY SSF52374 1 313 1.15E-101 T 29-03-2018 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 208 5.7E-85 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 Gene3D G3DSA:3.20.20.70 1 213 6.2E-31 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 Pfam PF01081 KDPG and KHG aldolase 9 203 4.4E-88 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 SUPERFAMILY SSF51569 3 208 1.56E-69 T 29-03-2018 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CPU03_RS01360 47d51ff953b4a9785647df3e7a0b938b 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CPU03_RS08970 18c04cc69fb1cd48cd5f2970cb1b4d33 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.4E-162 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CPU03_RS08970 18c04cc69fb1cd48cd5f2970cb1b4d33 378 Pfam PF02595 Glycerate kinase family 3 373 4.5E-150 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CPU03_RS08970 18c04cc69fb1cd48cd5f2970cb1b4d33 378 SUPERFAMILY SSF110738 1 374 2.48E-142 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CPU03_RS08970 18c04cc69fb1cd48cd5f2970cb1b4d33 378 PIRSF PIRSF006078 1 377 3.2E-138 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CPU03_RS08970 18c04cc69fb1cd48cd5f2970cb1b4d33 378 Gene3D G3DSA:3.90.1510.10 42 276 2.0E-98 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 3.3E-102 T 29-03-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 SUPERFAMILY SSF52540 16 242 2.76E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 Pfam PF00005 ABC transporter 20 168 1.0E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 Gene3D G3DSA:3.40.50.300 1 246 8.5E-53 T 29-03-2018 CPU03_RS15270 0202a8a503d89dd8b8b11b6979fceb96 254 SMART SM00382 28 218 2.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01075 3f1a1a131b22fc33ac0db14c2e5af5a0 352 Gene3D G3DSA:3.40.50.2300 3 279 3.3E-38 T 29-03-2018 CPU03_RS01075 3f1a1a131b22fc33ac0db14c2e5af5a0 352 Pfam PF00072 Response regulator receiver domain 10 120 1.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01075 3f1a1a131b22fc33ac0db14c2e5af5a0 352 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 52.456 T 29-03-2018 IPR028616 Regulator of RpoS CPU03_RS01075 3f1a1a131b22fc33ac0db14c2e5af5a0 352 SMART SM00448 8 120 3.1E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01075 3f1a1a131b22fc33ac0db14c2e5af5a0 352 SUPERFAMILY SSF52172 7 159 2.28E-36 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS14540 9b734f0b73b62d7d3fb7a666bba5dcf4 108 SUPERFAMILY SSF54909 15 107 3.55E-23 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS14540 9b734f0b73b62d7d3fb7a666bba5dcf4 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 17 89 2.2E-14 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CPU03_RS14540 9b734f0b73b62d7d3fb7a666bba5dcf4 108 Gene3D G3DSA:3.30.70.100 5 106 3.4E-18 T 29-03-2018 CPU03_RS02820 f9d691fefefb0fd1067a92e9379bd4fe 88 Pfam PF03927 NapD protein 6 82 5.1E-29 T 29-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CPU03_RS10010 543c6b158afb3adb7db40c189d708d9e 162 Pfam PF04074 Domain of unknown function (DUF386) 1 152 3.0E-38 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS10010 543c6b158afb3adb7db40c189d708d9e 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 155 1.2E-40 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS10010 543c6b158afb3adb7db40c189d708d9e 162 Gene3D G3DSA:2.60.120.370 1 157 3.3E-43 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS10010 543c6b158afb3adb7db40c189d708d9e 162 SUPERFAMILY SSF51197 1 154 1.57E-35 T 29-03-2018 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Gene3D G3DSA:3.40.50.300 6 279 6.8E-37 T 29-03-2018 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 162 1.1E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 6.0E-47 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Gene3D G3DSA:2.40.30.10 280 387 1.0E-22 T 29-03-2018 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.6E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.563 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 9.7E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 SUPERFAMILY SSF50447 262 393 6.63E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 SUPERFAMILY SSF52540 10 277 3.79E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 Gene3D G3DSA:3.30.70.870 394 469 3.7E-10 T 29-03-2018 CPU03_RS05445 56f6bedb229bee10e471ff57974d96b1 529 SUPERFAMILY SSF54980 393 468 6.12E-17 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS06650 ef679d8f3f8024c6ebb55a1035d58b8a 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 9.3E-40 T 29-03-2018 IPR007416 Protein of unknown function DUF469 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 SUPERFAMILY SSF51569 1 218 4.4E-66 T 29-03-2018 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 5.1E-96 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 207 1.6E-47 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 Gene3D G3DSA:3.20.20.70 1 220 5.5E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 49.255 T 29-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS14865 b4640054aa49c1a0d3ff07a14eb48cf4 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 SUPERFAMILY SSF111038 1 137 1.83E-46 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 4.7E-36 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 Gene3D G3DSA:2.60.120.460 1 138 8.8E-58 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 138 2.5E-47 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09680 271d77eb6cf10600cdbec96353b7d68e 142 PIRSF PIRSF004681 1 138 1.6E-44 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 SUPERFAMILY SSF53756 12 814 0.0 T 29-03-2018 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 Gene3D G3DSA:3.40.50.2000 5 479 2.7E-198 T 29-03-2018 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 PIRSF PIRSF000460 3 815 1.7E-238 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09030 bd48b71400ccfcabb0c6f654ae7e568c 815 Gene3D G3DSA:3.40.50.2000 480 795 1.0E-137 T 29-03-2018 CPU03_RS05835 9ab8046fa34dd939c0f4835155079adc 326 Gene3D G3DSA:3.30.360.10 146 325 3.7E-28 T 29-03-2018 CPU03_RS05835 9ab8046fa34dd939c0f4835155079adc 326 Gene3D G3DSA:3.40.50.720 1 145 1.6E-36 T 29-03-2018 CPU03_RS05835 9ab8046fa34dd939c0f4835155079adc 326 SUPERFAMILY SSF51735 2 152 2.31E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS05835 9ab8046fa34dd939c0f4835155079adc 326 SUPERFAMILY SSF55347 127 292 6.87E-25 T 29-03-2018 CPU03_RS05835 9ab8046fa34dd939c0f4835155079adc 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.4E-25 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 Gene3D G3DSA:1.10.10.10 1 81 1.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 SUPERFAMILY SSF46689 1 77 3.76E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 74 9.3E-24 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 Gene3D G3DSA:3.40.50.10490 83 271 4.5E-34 T 29-03-2018 CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 Pfam PF01380 SIS domain 129 258 4.4E-24 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS04040 30f7b4e9a354e957be39eed312da26ef 283 SUPERFAMILY SSF53697 102 264 3.64E-36 T 29-03-2018 CPU03_RS06640 48d8709b6c6d6bdff7cbb4ce81bb0211 242 Pfam PF11101 Protein of unknown function (DUF2884) 23 241 1.2E-49 T 29-03-2018 IPR021307 Protein of unknown function DUF2884 CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.6E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.413 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.0E-36 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 74 0.01 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 SUPERFAMILY SSF47336 2 76 8.51E-23 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain CPU03_RS14590 fdea5d9973322f9002c6c31442e53112 78 Gene3D G3DSA:1.10.1200.10 1 78 9.0E-27 T 29-03-2018 CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 Pfam PF13567 Domain of unknown function (DUF4131) 10 170 3.2E-11 T 29-03-2018 IPR025405 Domain of unknown function DUF4131 CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 224 407 2.4E-32 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 111 721 5.5E-147 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 SMART SM00849 514 692 0.0031 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 Gene3D G3DSA:3.60.15.10 498 717 1.1E-21 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 Pfam PF00753 Metallo-beta-lactamase superfamily 512 683 2.7E-13 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 Pfam PF03772 Competence protein 203 473 2.4E-56 T 29-03-2018 IPR004477 ComEC/Rec2-related protein CPU03_RS14270 f8b2b6c904480793fe9a71e1bda09b50 757 SUPERFAMILY SSF56281 504 739 3.11E-40 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.348 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.0E-198 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Gene3D G3DSA:3.30.300.10 134 233 2.3E-42 T 29-03-2018 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 SUPERFAMILY SSF55973 3 109 5.1E-47 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.4E-71 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.9E-45 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 SUPERFAMILY SSF55973 113 232 5.1E-51 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Gene3D G3DSA:3.30.300.10 246 383 7.9E-51 T 29-03-2018 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 SUPERFAMILY SSF55973 233 382 5.42E-72 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Gene3D G3DSA:3.30.300.10 11 133 1.3E-43 T 29-03-2018 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 PIRSF PIRSF000497 1 382 1.3E-174 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS10500 0e4ff314368b813cf903ba7afcc62740 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.6E-42 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 4.6E-109 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 Gene3D G3DSA:3.30.950.10 122 237 6.4E-40 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 210 2.4E-28 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 SUPERFAMILY SSF53790 13 232 1.57E-81 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 Gene3D G3DSA:3.40.1010.10 11 121 1.7E-42 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 37.801 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS05165 2ec70e7da3962f202eca6bef75c24796 291 PIRSF PIRSF005917 1 287 4.0E-106 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS07635 efcbfa847344a633a73e281df85e8cd3 424 SUPERFAMILY SSF53756 56 418 1.41E-18 T 29-03-2018 CPU03_RS07635 efcbfa847344a633a73e281df85e8cd3 424 Gene3D G3DSA:3.40.50.2000 50 195 8.8E-4 T 29-03-2018 CPU03_RS07635 efcbfa847344a633a73e281df85e8cd3 424 Pfam PF00534 Glycosyl transferases group 1 236 397 8.3E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS07635 efcbfa847344a633a73e281df85e8cd3 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 4.9E-66 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CPU03_RS07635 efcbfa847344a633a73e281df85e8cd3 424 Gene3D G3DSA:3.40.50.2000 210 403 5.2E-15 T 29-03-2018 CPU03_RS06705 0d1572efe40b5584afb40cfe8dbfcc29 484 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 482 1.0E-153 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS06705 0d1572efe40b5584afb40cfe8dbfcc29 484 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 21 478 3.2E-146 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS06705 0d1572efe40b5584afb40cfe8dbfcc29 484 PIRSF PIRSF002457 1 483 1.2E-137 T 29-03-2018 IPR030676 Citrate carrier CitT-related CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 Gene3D G3DSA:1.20.200.10 142 418 4.3E-72 T 29-03-2018 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 Gene3D G3DSA:1.10.40.30 419 468 2.3E-18 T 29-03-2018 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 SUPERFAMILY SSF48557 2 458 1.22E-143 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 Pfam PF10415 Fumarase C C-terminus 411 464 1.2E-17 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 Pfam PF00206 Lyase 13 345 1.1E-107 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.1E-6 T 29-03-2018 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.1E-6 T 29-03-2018 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.1E-6 T 29-03-2018 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 Gene3D G3DSA:1.10.275.10 3 141 2.5E-51 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 4.8E-265 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 3.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 3.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS06445 e5560e21af15d298149bf14ab7d8b374 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 3.9E-27 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 Pfam PF04993 TfoX N-terminal domain 15 106 5.4E-30 T 29-03-2018 IPR007076 TfoX, N-terminal CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 Pfam PF04994 TfoX C-terminal domain 119 196 1.9E-18 T 29-03-2018 IPR007077 TfoX, C-terminal CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 PIRSF PIRSF028788 1 207 5.3E-42 T 29-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 Gene3D G3DSA:3.30.1460.30 6 108 4.9E-22 T 29-03-2018 CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 Gene3D G3DSA:1.10.150.20 118 196 1.6E-17 T 29-03-2018 CPU03_RS02060 fae4b3793af4f8640e6f1230ea694656 207 SUPERFAMILY SSF159894 11 107 4.45E-28 T 29-03-2018 CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 Pfam PF08918 PhoQ Sensor 13 190 1.7E-87 T 29-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 SUPERFAMILY SSF47384 252 325 4.71E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 Gene3D G3DSA:3.30.565.10 297 481 2.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 SUPERFAMILY SSF55874 340 480 1.17E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 480 8.2E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 1.4E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 1.4E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14755 b7aafc268951e5aad5f7780831605744 488 SMART SM00387 378 484 2.0E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 SUPERFAMILY SSF53067 137 310 9.97E-47 T 29-03-2018 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 Pfam PF02541 Ppx/GppA phosphatase family 26 308 2.1E-98 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 Gene3D G3DSA:3.30.420.150 125 305 4.1E-35 T 29-03-2018 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 PIRSF PIRSF001267 4 505 3.6E-198 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 SUPERFAMILY SSF53067 13 133 7.89E-37 T 29-03-2018 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 306 3.4E-98 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 Gene3D G3DSA:3.30.420.40 1 124 8.7E-39 T 29-03-2018 CPU03_RS02955 5e26580201b45137e6f7030a6b043b3e 509 SUPERFAMILY SSF109604 313 504 1.26E-47 T 29-03-2018 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 SMART SM00411 1 90 4.4E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 Gene3D G3DSA:4.10.520.10 1 90 8.4E-34 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-20 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-33 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS03330 0dae4f72e2ea925715660e9c9cf095a9 90 SUPERFAMILY SSF47729 1 90 3.97E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Gene3D G3DSA:1.20.120.30 38 162 5.4E-18 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Pfam PF02203 Tar ligand binding domain homologue 1 173 1.5E-23 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 SUPERFAMILY SSF58104 236 517 7.59E-70 T 29-03-2018 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 SMART SM00304 216 268 8.8E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 SMART SM00283 269 516 1.2E-88 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Gene3D G3DSA:1.10.287.950 163 325 2.1E-19 T 29-03-2018 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Gene3D G3DSA:1.10.287.950 326 518 1.6E-45 T 29-03-2018 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Pfam PF00672 HAMP domain 216 263 3.6E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 SUPERFAMILY SSF47170 28 181 3.27E-12 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 483 2.0E-52 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.3E-57 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.3E-57 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.3E-57 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.3E-57 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08605 f58e0d784eaea853f36cfd450a704741 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.3E-57 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 Pfam PF00293 NUDIX domain 28 157 9.6E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 Gene3D G3DSA:3.90.79.10 2 174 6.5E-29 T 29-03-2018 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 PIRSF PIRSF018427 1 173 1.3E-49 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 2 172 31.844 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 SUPERFAMILY SSF55811 4 167 3.11E-45 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS08595 2a5d0707d2a9f5571c115cbc92ba0d35 176 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 4 160 2.7E-38 T 29-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 SUPERFAMILY SSF100950 76 237 2.62E-25 T 29-03-2018 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 SMART SM00420 8 57 7.6E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 8.3E-11 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 SMART SM01134 75 236 1.9E-55 T 29-03-2018 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 Gene3D G3DSA:3.40.50.1360 67 232 2.4E-30 T 29-03-2018 CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.5E-41 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS13865 b8d9b9555c3c3c8ca0c2f8a48b1513b2 254 Gene3D G3DSA:1.10.10.10 1 62 1.8E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PIRSF PIRSF000723 2 319 2.8E-125 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 SUPERFAMILY SSF53633 6 317 9.69E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 76 94 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 6.8E-57 T 29-03-2018 CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 Pfam PF00696 Amino acid kinase family 5 288 5.3E-24 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS15235 db4274303a5a9834215b21f75b6c729a 319 Gene3D G3DSA:3.40.1160.10 2 318 5.3E-47 T 29-03-2018 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 SMART SM00345 10 69 4.7E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 3.9E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 SMART SM00866 90 230 0.0056 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 Pfam PF07702 UTRA domain 90 229 3.5E-11 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.6E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 SUPERFAMILY SSF64288 59 234 3.3E-17 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 Gene3D G3DSA:1.10.10.10 3 68 9.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 Gene3D G3DSA:3.40.1410.10 69 235 8.2E-11 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS12945 01288aa391becc9285c48e99b5e644ef 235 SUPERFAMILY SSF46785 10 79 8.42E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 SUPERFAMILY SSF56925 27 190 4.97E-27 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 44 52 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 Gene3D G3DSA:2.40.160.20 21 190 1.9E-22 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 182 190 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 Pfam PF13505 Outer membrane protein beta-barrel domain 9 190 1.4E-22 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 89 112 2.5E-25 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 147 168 2.5E-25 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS12015 d10a38fc302a238e6c1f967e0e7b12f8 190 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 43 55 2.5E-25 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 10 386 43.104 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 SUPERFAMILY SSF53756 13 365 3.82E-31 T 29-03-2018 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 Pfam PF02684 Lipid-A-disaccharide synthetase 13 381 2.3E-143 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 Gene3D G3DSA:3.40.50.2000 6 188 1.5E-4 T 29-03-2018 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 Gene3D G3DSA:3.40.50.2000 189 371 3.2E-13 T 29-03-2018 CPU03_RS04125 3462780510a1ede0f65d87fe5bde0eaa 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 8 384 8.1E-170 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 SUPERFAMILY SSF52540 3 253 6.17E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 Gene3D G3DSA:3.40.50.300 1 323 1.3E-71 T 29-03-2018 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.0E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 1.3E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 Pfam PF00005 ABC transporter 24 181 1.0E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08655 2fa7053a8e89b1b9fe541d1667a39f6a 326 SMART SM00382 32 231 4.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 29-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 SUPERFAMILY SSF52540 1 141 1.41E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 Pfam PF00265 Thymidine kinase 2 186 1.2E-63 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 Gene3D G3DSA:3.30.60.20 142 191 7.3E-19 T 29-03-2018 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 PIRSF PIRSF035805 1 193 1.7E-59 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 SUPERFAMILY SSF57716 142 189 1.19E-17 T 29-03-2018 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 36.349 T 29-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CPU03_RS01060 68d459d1b7a38c5114659891e2073047 196 Gene3D G3DSA:3.40.50.300 2 141 2.6E-46 T 29-03-2018 CPU03_RS00775 8bafb00864787f80d9ad9be4dcfafb4c 529 Gene3D G3DSA:3.20.20.450 261 521 2.4E-74 T 29-03-2018 IPR001633 EAL domain CPU03_RS00775 8bafb00864787f80d9ad9be4dcfafb4c 529 Pfam PF12792 CSS motif domain associated with EAL 46 238 6.0E-19 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CPU03_RS00775 8bafb00864787f80d9ad9be4dcfafb4c 529 SMART SM00052 266 507 1.3E-85 T 29-03-2018 IPR001633 EAL domain CPU03_RS00775 8bafb00864787f80d9ad9be4dcfafb4c 529 SUPERFAMILY SSF141868 274 516 6.28E-72 T 29-03-2018 IPR001633 EAL domain CPU03_RS00775 8bafb00864787f80d9ad9be4dcfafb4c 529 Pfam PF00563 EAL domain 274 502 4.6E-57 T 29-03-2018 IPR001633 EAL domain CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 52.116 T 29-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 Gene3D G3DSA:3.40.50.2300 3 131 5.5E-21 T 29-03-2018 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 7.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 7.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 7.0E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 SUPERFAMILY SSF52172 3 135 5.41E-21 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 SMART SM00421 148 205 4.5E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 Gene3D G3DSA:1.10.10.10 132 215 3.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 SMART SM00448 4 120 2.6E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 SUPERFAMILY SSF46894 147 211 1.6E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS13540 aab8af1036ed6d0c0ba0cdc8b7f96c75 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.3E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.7E-19 T 29-03-2018 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Gene3D G3DSA:1.25.40.10 123 185 1.2E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.1E-28 T 29-03-2018 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Pfam PF00085 Thioredoxin 6 107 1.4E-19 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Gene3D G3DSA:3.40.30.10 2 122 2.8E-28 T 29-03-2018 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 SUPERFAMILY SSF52833 5 111 4.75E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 Gene3D G3DSA:1.25.20.10 186 283 1.2E-6 T 29-03-2018 CPU03_RS11835 0f9f134a8bb7c6519f42700f503fe8af 284 SUPERFAMILY SSF48452 120 245 2.03E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS06260 350ec626c79a08fe03ad3f02cab29a3f 140 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 5.9E-36 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CPU03_RS06260 350ec626c79a08fe03ad3f02cab29a3f 140 Pfam PF02082 Transcriptional regulator 2 82 1.4E-23 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CPU03_RS06260 350ec626c79a08fe03ad3f02cab29a3f 140 SUPERFAMILY SSF46785 2 130 7.58E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06260 350ec626c79a08fe03ad3f02cab29a3f 140 Gene3D G3DSA:1.10.10.10 1 135 3.7E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 Gene3D G3DSA:4.10.1230.10 110 164 1.8E-26 T 29-03-2018 IPR027438 Ecotin, C-terminal CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 Gene3D G3DSA:2.60.40.550 32 104 1.8E-32 T 29-03-2018 CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 Pfam PF03974 Ecotin 35 157 3.3E-50 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 Hamap MF_00706 Ecotin [eco]. 4 167 37.463 T 29-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 PIRSF PIRSF006865 1 167 2.8E-62 T 29-03-2018 IPR005658 Proteinase inhibitor I11, ecotin CPU03_RS12865 a137920727efad0f2af96aac15d13c06 167 SUPERFAMILY SSF49772 31 165 1.57E-53 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 Gene3D G3DSA:4.10.520.10 1 94 6.9E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 9.9E-52 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 SUPERFAMILY SSF47729 1 91 1.41E-30 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 3.8E-30 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 SMART SM00411 1 91 2.2E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS14260 a2783f4f4b9266ca0b159593c0d6728c 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 31.493 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 381 48.5 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 SMART SM01097 3 133 1.6E-91 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 SUPERFAMILY SSF52021 3 141 4.58E-57 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 309 320 2.2E-40 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 283 2.2E-40 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 197 211 2.2E-40 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 301 2.2E-40 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 2.2E-40 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00097 Anthranilate synthase component II signature 239 248 1.5E-5 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00097 Anthranilate synthase component II signature 267 278 1.5E-5 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00097 Anthranilate synthase component II signature 352 365 1.5E-5 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 378 6.1E-148 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 4.3E-11 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00096 Glutamine amidotransferase superfamily signature 267 278 4.3E-11 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 PRINTS PR00096 Glutamine amidotransferase superfamily signature 352 365 4.3E-11 T 29-03-2018 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 Gene3D G3DSA:3.40.50.880 155 382 4.9E-67 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.7E-52 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 Gene3D G3DSA:3.50.30.20 2 154 3.5E-62 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 Pfam PF00117 Glutamine amidotransferase class-I 200 375 6.2E-48 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS04860 063d58016869d01ca4d2d8112668056b 385 SUPERFAMILY SSF52317 156 381 2.62E-61 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 238 3.1E-45 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 Gene3D G3DSA:3.90.1310.10 34 250 3.4E-51 T 29-03-2018 CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 Gene3D G3DSA:3.40.710.10 251 620 3.6E-84 T 29-03-2018 CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 615 4.9E-224 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 SUPERFAMILY SSF56519 58 254 4.19E-48 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 SUPERFAMILY SSF56601 255 616 1.94E-91 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS00650 88da233681276c96921a3dc21ba83299 677 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 611 1.5E-75 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS01825 445b2e861c3df66b9eeb3bb7d318cf7b 537 Gene3D G3DSA:3.40.720.10 209 489 3.2E-22 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS01825 445b2e861c3df66b9eeb3bb7d318cf7b 537 Pfam PF00884 Sulfatase 220 484 5.4E-40 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS01825 445b2e861c3df66b9eeb3bb7d318cf7b 537 SUPERFAMILY SSF53649 221 488 2.43E-22 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS16665 ee78103e31d2a72a2fbdddbfe1046342 311 Pfam PF01171 PP-loop family 42 204 3.4E-15 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CPU03_RS16665 ee78103e31d2a72a2fbdddbfe1046342 311 Gene3D G3DSA:3.40.50.620 5 241 1.6E-37 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS16665 ee78103e31d2a72a2fbdddbfe1046342 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 271 57.767 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CPU03_RS16665 ee78103e31d2a72a2fbdddbfe1046342 311 PIRSF PIRSF004976 2 273 1.5E-74 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CPU03_RS16665 ee78103e31d2a72a2fbdddbfe1046342 311 SUPERFAMILY SSF52402 17 236 3.83E-54 T 29-03-2018 CPU03_RS01740 e1dbd4f3cceaea647ce011656c40f890 369 Pfam PF01699 Sodium/calcium exchanger protein 44 192 2.6E-14 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CPU03_RS01740 e1dbd4f3cceaea647ce011656c40f890 369 Pfam PF01699 Sodium/calcium exchanger protein 234 368 7.1E-7 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CPU03_RS01740 e1dbd4f3cceaea647ce011656c40f890 369 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 14 368 1.2E-99 T 29-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 45.889 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 Pfam PF13847 Methyltransferase domain 111 245 1.5E-19 T 29-03-2018 IPR025714 Methyltransferase domain CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 Gene3D G3DSA:3.40.50.150 85 276 4.1E-47 T 29-03-2018 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 275 9.4E-88 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 SUPERFAMILY SSF53335 4 273 7.65E-63 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 4.3E-92 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 Gene3D G3DSA:1.10.8.10 1 84 1.8E-22 T 29-03-2018 CPU03_RS01600 b34cace91b2449ba70f2118842f62c6c 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SUPERFAMILY SSF46600 623 668 2.62E-12 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Pfam PF00271 Helicase conserved C-terminal domain 436 544 1.9E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SUPERFAMILY SSF52540 459 575 3.64E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SUPERFAMILY SSF52540 37 82 3.64E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Gene3D G3DSA:4.10.860.10 611 671 6.0E-17 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Gene3D G3DSA:3.40.50.300 10 410 9.2E-34 T 29-03-2018 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 667 43.979 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 665 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Pfam PF04851 Type III restriction enzyme, res subunit 14 92 8.8E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Pfam PF02151 UvrB/uvrC motif 632 667 3.7E-8 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Gene3D G3DSA:3.40.50.300 415 589 1.2E-30 T 29-03-2018 CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SMART SM00490 460 546 1.4E-19 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SMART SM00487 9 426 1.4E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 SUPERFAMILY SSF52540 3 415 7.99E-138 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12735 1b9bcb773d7680d9db32a050c8bf7456 672 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.4E-18 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.6E-18 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 PIRSF PIRSF006092 8 128 1.8E-22 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 Gene3D G3DSA:1.10.286.20 3 43 1.1E-12 T 29-03-2018 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.359 T 29-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 Gene3D G3DSA:3.10.50.30 45 136 4.8E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 SUPERFAMILY SSF54534 49 126 5.89E-17 T 29-03-2018 CPU03_RS05385 dbb97bd7734527d325036e39438d2920 136 Pfam PF14760 Rnk N-terminus 4 42 1.4E-11 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 SMART SM00862 152 224 1.9E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 3.7E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 Gene3D G3DSA:1.10.10.10 128 229 3.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 SUPERFAMILY SSF52172 4 185 5.69E-34 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-28 T 29-03-2018 CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 SMART SM00448 3 113 1.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06495 e24354ef2f5586dd5827e7a9236b9af8 229 Pfam PF00072 Response regulator receiver domain 5 113 2.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 SUPERFAMILY SSF103473 11 446 6.67E-85 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 6.1E-263 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 Gene3D G3DSA:1.20.1250.20 240 451 2.1E-32 T 29-03-2018 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 Gene3D G3DSA:1.20.1250.20 18 224 3.7E-34 T 29-03-2018 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 PIRSF PIRSF002808 5 451 1.6E-173 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 Pfam PF07690 Major Facilitator Superfamily 34 400 4.3E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS09990 0c2f7592e12631605439932e1f5e079a 451 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.7E-166 T 29-03-2018 CPU03_RS04025 447c96350c43f5ae4d2e098dc770b3aa 112 SMART SM00450 14 110 9.3E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS04025 447c96350c43f5ae4d2e098dc770b3aa 112 Pfam PF00581 Rhodanese-like domain 30 105 1.3E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS04025 447c96350c43f5ae4d2e098dc770b3aa 112 Gene3D G3DSA:3.40.250.10 27 110 6.3E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS04025 447c96350c43f5ae4d2e098dc770b3aa 112 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 13 106 3.4E-40 T 29-03-2018 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CPU03_RS04025 447c96350c43f5ae4d2e098dc770b3aa 112 SUPERFAMILY SSF52821 29 101 3.67E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 Gene3D G3DSA:3.40.50.300 195 360 9.1E-26 T 29-03-2018 CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 Gene3D G3DSA:3.40.50.300 401 629 2.9E-22 T 29-03-2018 CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 SMART SM00487 194 379 4.0E-18 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 TIGRFAM TIGR00595 priA: primosomal protein N' 220 729 3.9E-204 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 731 25.945 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 Pfam PF00270 DEAD/DEAH box helicase 219 363 1.6E-11 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 SUPERFAMILY SSF52540 149 377 9.87E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 SUPERFAMILY SSF52540 459 614 1.03E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 Pfam PF00271 Helicase conserved C-terminal domain 521 588 1.2E-5 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS08510 7c1039d93be29073bc9fe3724dead1d7 731 SMART SM00490 491 588 1.9E-9 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 166 1.2E-64 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 Pfam PF00258 Flavodoxin 5 160 1.3E-24 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 Gene3D G3DSA:3.40.50.360 2 170 4.4E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 PIRSF PIRSF038996 1 171 3.2E-53 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CPU03_RS10660 02d8919e51cd0d9946a0c84028320b70 172 SUPERFAMILY SSF52218 1 165 4.48E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 2 796 3.4E-299 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 PIRSF PIRSF000460 1 801 8.2E-199 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 Gene3D G3DSA:3.40.50.2000 1 469 3.5E-163 T 29-03-2018 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 Gene3D G3DSA:3.40.50.2000 470 782 1.1E-110 T 29-03-2018 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 Pfam PF00343 Carbohydrate phosphorylase 88 796 3.2E-274 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS11985 fbb8b1ebe3b32f0d86e00d91c82f65ce 801 SUPERFAMILY SSF53756 2 797 4.4E-267 T 29-03-2018 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 Gene3D G3DSA:3.20.20.80 132 572 1.9E-102 T 29-03-2018 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 SUPERFAMILY SSF51445 128 463 5.49E-119 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 SUPERFAMILY SSF51445 492 565 5.49E-119 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 Gene3D G3DSA:2.60.40.10 1 131 4.6E-36 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 9 95 4.1E-16 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 SUPERFAMILY SSF51011 575 657 2.66E-5 T 29-03-2018 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 SUPERFAMILY SSF81296 4 142 1.68E-38 T 29-03-2018 IPR014756 Immunoglobulin E-set CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 Pfam PF00128 Alpha amylase, catalytic domain 242 293 1.5E-4 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 Gene3D G3DSA:2.60.40.1180 573 658 2.9E-9 T 29-03-2018 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 SMART SM00642 153 558 4.5E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS09045 567dc919ae55c5e051a604cf491a13e9 659 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 5 657 3.0E-262 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CPU03_RS15865 29f59d2002920b5c3a3f14a4b38c96d3 69 SMART SM00530 3 61 6.2E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS15865 29f59d2002920b5c3a3f14a4b38c96d3 69 SUPERFAMILY SSF47413 2 52 8.19E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS15865 29f59d2002920b5c3a3f14a4b38c96d3 69 Gene3D G3DSA:1.10.260.40 1 68 1.5E-15 T 29-03-2018 CPU03_RS15865 29f59d2002920b5c3a3f14a4b38c96d3 69 Pfam PF01381 Helix-turn-helix 4 52 1.3E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS00945 d8eaa4807b7a818eb068f6e9604b38d9 104 SMART SM00749 42 104 1.2E-6 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CPU03_RS00945 d8eaa4807b7a818eb068f6e9604b38d9 104 Pfam PF04972 BON domain 37 104 1.0E-20 T 29-03-2018 IPR007055 BON domain CPU03_RS00945 d8eaa4807b7a818eb068f6e9604b38d9 104 Gene3D G3DSA:3.40.190.10 1 88 5.7E-5 T 29-03-2018 CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 Gene3D G3DSA:1.25.40.10 24 248 5.8E-30 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 236 4.0E-50 T 29-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 SUPERFAMILY SSF48452 43 195 2.37E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 SMART SM00028 137 170 3.5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 SMART SM00028 67 100 28.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS11345 9cc2d2120da426b37c7fb7b9665b36bf 249 Pfam PF13431 Tetratricopeptide repeat 90 122 7.5E-6 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 Gene3D G3DSA:1.20.1600.10 193 270 3.2E-13 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 Gene3D G3DSA:1.10.287.470 111 170 4.4E-12 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 318 3.9E-12 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 Gene3D G3DSA:1.10.287.470 173 192 0.0072 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 SUPERFAMILY SSF111369 112 169 7.59E-5 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 SUPERFAMILY SSF111369 177 323 2.22E-12 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 Gene3D G3DSA:2.40.50.100 43 107 4.4E-15 T 29-03-2018 CPU03_RS13565 764e787706049a0f2ba86893a8c9d4d4 331 SUPERFAMILY SSF111369 42 125 8.63E-10 T 29-03-2018 CPU03_RS13480 d64f9f210925da9d424b0f9fa65a8ef0 161 Gene3D G3DSA:3.30.70.640 2 158 7.6E-67 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CPU03_RS13480 d64f9f210925da9d424b0f9fa65a8ef0 161 Pfam PF01967 MoaC family 15 150 3.2E-53 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CPU03_RS13480 d64f9f210925da9d424b0f9fa65a8ef0 161 SUPERFAMILY SSF55040 11 155 4.05E-60 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CPU03_RS13480 d64f9f210925da9d424b0f9fa65a8ef0 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.6E-70 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CPU03_RS13480 d64f9f210925da9d424b0f9fa65a8ef0 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.88 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 SUPERFAMILY SSF47384 120 194 7.46E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 309 1.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 350 1.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 330 1.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 350 6.2E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 SMART SM00387 242 353 3.4E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 Gene3D G3DSA:1.10.287.130 126 192 1.8E-10 T 29-03-2018 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 SUPERFAMILY SSF55874 186 352 1.23E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 SMART SM00388 136 196 3.8E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 194 6.8E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS06085 b1dbcd610cdf64db423ef7575153388f 356 Gene3D G3DSA:3.30.565.10 206 355 7.3E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 Gene3D G3DSA:3.40.50.720 1 143 1.1E-19 T 29-03-2018 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 PIRSF PIRSF000148 1 367 6.5E-71 T 29-03-2018 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 Gene3D G3DSA:3.30.360.10 144 350 8.9E-61 T 29-03-2018 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 SUPERFAMILY SSF55347 134 354 6.22E-78 T 29-03-2018 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 2.2E-60 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 8.1E-25 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.976 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 5.0E-209 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 SMART SM00859 3 122 3.8E-26 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS08870 d9164d34a6cf84208d3bcdda6cb3e1be 367 SUPERFAMILY SSF51735 1 147 3.29E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01955 269998895c0ce8985d5ba7e165986708 111 Pfam PF00892 EamA-like transporter family 29 107 5.4E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS01955 269998895c0ce8985d5ba7e165986708 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 27.869 T 29-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CPU03_RS01955 269998895c0ce8985d5ba7e165986708 111 SUPERFAMILY SSF103481 6 107 2.09E-16 T 29-03-2018 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 Gene3D G3DSA:3.90.1150.10 1 66 1.3E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.4E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.4E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.4E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.4E-37 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 SUPERFAMILY SSF53383 1 397 6.64E-114 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 Gene3D G3DSA:3.40.640.10 67 309 1.5E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 Gene3D G3DSA:3.90.1150.10 310 397 4.0E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS09675 3ea1b86b17b65a3967bf57803583c2f5 398 Pfam PF00155 Aminotransferase class I and II 27 393 5.6E-78 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 224 1.4E-10 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 SUPERFAMILY SSF55666 154 236 1.19E-24 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.9E-24 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 SUPERFAMILY SSF54211 1 181 3.39E-44 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.087 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.1E-113 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CPU03_RS07690 1ba0f96b97eabe92bfcd70dc4583ed88 237 Gene3D G3DSA:3.30.230.70 1 237 1.2E-58 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 PIRSF PIRSF026782 13 374 8.0E-129 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 30.53 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 Pfam PF01888 CbiD 17 273 2.0E-92 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 4.1E-87 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 Gene3D G3DSA:3.30.2110.10 19 188 2.5E-55 T 29-03-2018 CPU03_RS15035 b1727ebb646b17880f1c0405de4ea1c3 379 SUPERFAMILY SSF111342 9 291 2.09E-84 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Pfam PF14532 Sigma-54 interaction domain 143 281 1.5E-18 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 SUPERFAMILY SSF52540 141 338 9.16E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 SUPERFAMILY SSF52172 4 187 1.41E-39 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Gene3D G3DSA:3.40.50.300 141 282 4.0E-11 T 29-03-2018 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Gene3D G3DSA:3.40.50.2300 2 140 4.5E-32 T 29-03-2018 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Pfam PF02954 Bacterial regulatory protein, Fis family 364 404 1.7E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 SUPERFAMILY SSF46689 353 407 3.01E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Gene3D G3DSA:1.10.8.60 283 363 2.7E-16 T 29-03-2018 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Gene3D G3DSA:1.10.10.60 364 411 1.9E-15 T 29-03-2018 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 SMART SM00448 6 117 2.2E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01865 c227aa04cf0882d302434eff6784859a 412 Pfam PF00072 Response regulator receiver domain 8 118 6.8E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 Hamap MF_01958 Acetyl esterase [aes]. 1 320 72.189 T 29-03-2018 IPR023508 Acetyl esterase GO:0005737|GO:0052689 CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 - T 29-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 160 172 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 SUPERFAMILY SSF53474 37 320 3.98E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 Pfam PF07859 alpha/beta hydrolase fold 88 296 4.4E-50 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CPU03_RS12090 b365d13c665de5961240d53146371ebc 323 Gene3D G3DSA:3.40.50.1820 1 321 1.2E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SMART SM00116 96 144 1.7E-11 T 29-03-2018 IPR000644 CBS domain CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SMART SM00116 158 206 1.5E-7 T 29-03-2018 IPR000644 CBS domain CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 7.0E-196 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 Gene3D G3DSA:3.20.20.70 1 481 2.6E-113 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SMART SM01240 7 473 0.0 T 29-03-2018 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SUPERFAMILY SSF54631 94 203 3.66E-25 T 29-03-2018 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.343 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 Pfam PF00571 CBS domain 95 140 2.7E-8 T 29-03-2018 IPR000644 CBS domain CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 Pfam PF00571 CBS domain 149 202 9.6E-5 T 29-03-2018 IPR000644 CBS domain CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.6E-161 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 PIRSF PIRSF000130 1 487 8.2E-196 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SUPERFAMILY SSF51412 217 477 1.57E-124 T 29-03-2018 CPU03_RS11430 3e20bff759f20d8dac40a04214d5f9b9 488 SUPERFAMILY SSF51412 1 90 1.57E-124 T 29-03-2018 CPU03_RS02215 47c11174469124fcf9cba4642319f40f 251 SUPERFAMILY SSF117143 77 209 3.79E-18 T 29-03-2018 CPU03_RS02215 47c11174469124fcf9cba4642319f40f 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 6.2E-33 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CPU03_RS02215 47c11174469124fcf9cba4642319f40f 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 2.6E-21 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CPU03_RS02215 47c11174469124fcf9cba4642319f40f 251 Pfam PF00460 Flagella basal body rod protein 5 35 4.4E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 SUPERFAMILY SSF54534 174 275 2.75E-30 T 29-03-2018 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Pfam PF09312 SurA N-terminal domain 25 142 9.6E-45 T 29-03-2018 IPR015391 SurA N-terminal CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 SUPERFAMILY SSF54534 283 384 1.77E-33 T 29-03-2018 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Pfam PF13616 PPIC-type PPIASE domain 164 272 8.4E-24 T 29-03-2018 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.891 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Gene3D G3DSA:1.10.4030.10 21 148 5.5E-27 T 29-03-2018 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 SUPERFAMILY SSF109998 25 201 4.32E-44 T 29-03-2018 IPR027304 Trigger factor/SurA domain CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Pfam PF00639 PPIC-type PPIASE domain 289 380 1.7E-27 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Gene3D G3DSA:3.10.50.40 278 420 1.2E-33 T 29-03-2018 CPU03_RS04815 ea8b2ae0314a99055337e75ba683599a 434 Gene3D G3DSA:3.10.50.40 163 277 4.2E-28 T 29-03-2018 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 Pfam PF00231 ATP synthase 5 286 1.0E-95 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 Gene3D G3DSA:3.40.1380.10 42 239 2.6E-73 T 29-03-2018 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 SUPERFAMILY SSF52943 2 287 6.41E-97 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.1E-110 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.0E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.0E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.0E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.0E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.359 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 Gene3D G3DSA:1.10.287.80 240 282 1.3E-14 T 29-03-2018 CPU03_RS08095 d7dfd1d55eada040e96a7136d9d2ee14 287 Gene3D G3DSA:1.10.287.80 2 41 4.1E-18 T 29-03-2018 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 SUPERFAMILY SSF52172 1 108 1.85E-27 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 PIRSF PIRSF000876 1 347 7.5E-138 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 SMART SM00448 4 119 9.8E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 Pfam PF01339 CheB methylesterase 160 337 3.6E-62 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 Pfam PF00072 Response regulator receiver domain 6 109 1.4E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 41.406 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 Gene3D G3DSA:3.40.50.180 165 350 3.2E-80 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 SUPERFAMILY SSF52738 157 343 4.32E-74 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CPU03_RS01755 f178bff2652eb11ee2175aa279410f6e 350 Gene3D G3DSA:3.40.50.2300 1 164 1.7E-26 T 29-03-2018 CPU03_RS00895 183179301cb519524bc56d01ce25ba24 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 226 4.6E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00895 183179301cb519524bc56d01ce25ba24 232 Gene3D G3DSA:1.10.3720.10 3 232 8.3E-37 T 29-03-2018 CPU03_RS00895 183179301cb519524bc56d01ce25ba24 232 SUPERFAMILY SSF161098 26 229 4.19E-45 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00895 183179301cb519524bc56d01ce25ba24 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 26 123 8.4E-31 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 Gene3D G3DSA:3.20.10.10 143 303 5.0E-49 T 29-03-2018 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 Gene3D G3DSA:3.30.470.10 1 142 6.6E-45 T 29-03-2018 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.2E-143 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 SUPERFAMILY SSF56752 7 307 3.14E-105 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS07540 1b7c89ae2213b463461a941b06575f77 309 Pfam PF01063 Amino-transferase class IV 36 268 2.3E-50 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82866 836 1029 5.62E-44 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:1.20.1640.10 274 500 1.5E-42 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:1.20.1640.10 828 1032 6.7E-38 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 38 133 8.89E-28 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82714 182 272 2.35E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 810 858 1.31E-26 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 673 723 1.31E-26 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.1E-114 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:3.30.70.1430 568 669 3.7E-21 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:3.30.70.1440 673 770 2.4E-19 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82714 724 811 3.27E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82866 296 497 5.36E-47 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1045 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:3.30.2090.10 180 273 3.4E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 136 182 7.06E-27 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 274 330 7.06E-27 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Gene3D G3DSA:3.30.70.1430 38 140 3.6E-30 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 SUPERFAMILY SSF82693 566 670 8.89E-32 T 29-03-2018 CPU03_RS03255 a67e7b9f0b51693bb70a9a417c035272 1051 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 SUPERFAMILY SSF52540 940 1110 4.65E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 Gene3D G3DSA:3.40.50.300 900 1124 8.0E-16 T 29-03-2018 CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 Gene3D G3DSA:3.40.50.300 1125 1458 8.5E-5 T 29-03-2018 CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 Pfam PF13604 AAA domain 968 1153 8.4E-32 T 29-03-2018 CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1457 0.0 T 29-03-2018 IPR014129 Conjugative transfer relaxase protein TraI CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 2.1E-101 T 29-03-2018 IPR014059 Conjugative relaxase, N-terminal CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 SUPERFAMILY SSF52540 1328 1454 2.2E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 SUPERFAMILY SSF52540 1219 1251 2.2E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 SUPERFAMILY SSF52540 1088 1146 2.2E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 Pfam PF07057 DNA helicase TraI 1430 1545 1.8E-46 T 29-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 Pfam PF08751 TrwC relaxase 10 282 1.7E-72 T 29-03-2018 IPR014862 TrwC relaxase CPU03_RS17070 8d4f2d4edb2314a6733a5b531e30bab0 1745 SUPERFAMILY SSF55464 1 301 8.7E-95 T 29-03-2018 CPU03_RS07940 c1c850d4bd7ef06fc4d846e8c0fb50ba 194 Gene3D G3DSA:3.90.550.10 1 189 9.0E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07940 c1c850d4bd7ef06fc4d846e8c0fb50ba 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 4 184 4.1E-68 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CPU03_RS07940 c1c850d4bd7ef06fc4d846e8c0fb50ba 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 186 27.815 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CPU03_RS07940 c1c850d4bd7ef06fc4d846e8c0fb50ba 194 Pfam PF12804 MobA-like NTP transferase domain 6 156 1.5E-35 T 29-03-2018 IPR025877 MobA-like NTP transferase CPU03_RS07940 c1c850d4bd7ef06fc4d846e8c0fb50ba 194 SUPERFAMILY SSF53448 4 179 5.86E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS00700 d2b62d0d649d42372d33c716663a1db1 290 SUPERFAMILY SSF56112 10 278 2.57E-44 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS00700 d2b62d0d649d42372d33c716663a1db1 290 Gene3D G3DSA:3.90.1200.10 95 272 2.4E-19 T 29-03-2018 CPU03_RS00700 d2b62d0d649d42372d33c716663a1db1 290 PIRSF PIRSF006221 1 288 1.6E-87 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CPU03_RS00700 d2b62d0d649d42372d33c716663a1db1 290 Gene3D G3DSA:3.30.200.20 1 92 7.3E-20 T 29-03-2018 CPU03_RS00700 d2b62d0d649d42372d33c716663a1db1 290 Pfam PF03881 Fructosamine kinase 1 286 1.5E-113 T 29-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CPU03_RS09910 8f80f5dc4d9174f3a95055750ac80f6f 1264 Pfam PF13116 Protein of unknown function 500 780 8.1E-95 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 CPU03_RS09910 8f80f5dc4d9174f3a95055750ac80f6f 1264 Pfam PF13502 AsmA-like C-terminal region 1007 1250 9.9E-61 T 29-03-2018 IPR032712 AsmA-like, C-terminal CPU03_RS09910 8f80f5dc4d9174f3a95055750ac80f6f 1264 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1260 0.0 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 14 207 27.994 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 PIRSF PIRSF005461 1 208 2.6E-81 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 Pfam PF01728 FtsJ-like methyltransferase 30 205 3.5E-57 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 SUPERFAMILY SSF53335 30 206 3.28E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 Gene3D G3DSA:3.40.50.150 2 208 2.1E-58 T 29-03-2018 CPU03_RS06060 095f969271f114be43fdf21ba3bb620f 208 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 19 205 4.1E-94 T 29-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 CPU03_RS12275 bb5044114f3c0b72d7ac44e73121a1a8 300 Gene3D G3DSA:3.40.190.10 168 300 5.5E-16 T 29-03-2018 CPU03_RS12275 bb5044114f3c0b72d7ac44e73121a1a8 300 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 269 1.7E-47 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS12275 bb5044114f3c0b72d7ac44e73121a1a8 300 SMART SM00062 39 271 2.2E-58 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS12275 bb5044114f3c0b72d7ac44e73121a1a8 300 SUPERFAMILY SSF53850 1 272 4.15E-62 T 29-03-2018 CPU03_RS12275 bb5044114f3c0b72d7ac44e73121a1a8 300 Gene3D G3DSA:3.40.190.10 3 167 1.8E-30 T 29-03-2018 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Gene3D G3DSA:3.40.190.10 192 270 0.19 T 29-03-2018 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Gene3D G3DSA:3.40.190.10 33 191 1.5E-22 T 29-03-2018 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Gene3D G3DSA:1.10.530.10 272 450 7.5E-35 T 29-03-2018 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 SMART SM00062 44 268 1.5E-34 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 267 3.5E-31 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 SUPERFAMILY SSF53955 432 444 3.41E-33 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 SUPERFAMILY SSF53955 247 397 3.41E-33 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Pfam PF01464 Transglycosylase SLT domain 296 400 3.9E-22 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 SUPERFAMILY SSF53850 52 267 8.15E-38 T 29-03-2018 CPU03_RS04015 6c2429e369c6d77f4ffc6449f33656c3 488 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 466 48.48 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CPU03_RS15990 eb149becd836496a312b563d8cb789a2 93 Gene3D G3DSA:3.30.2310.20 1 93 1.9E-23 T 29-03-2018 CPU03_RS15990 eb149becd836496a312b563d8cb789a2 93 SUPERFAMILY SSF143011 1 83 4.84E-22 T 29-03-2018 IPR035095 Toxin RelE-like domain CPU03_RS15990 eb149becd836496a312b563d8cb789a2 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 1.8E-12 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CPU03_RS15990 eb149becd836496a312b563d8cb789a2 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 4.2E-9 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 44 60 4.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 68 84 4.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 139 157 4.3E-13 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 Gene3D G3DSA:1.20.1260.10 1 162 9.4E-42 T 29-03-2018 IPR012347 Ferritin-related CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 ProSitePatterns PS00819 Dps protein family signature 2. 70 84 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 PIRSF PIRSF005900 1 162 4.6E-45 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 Pfam PF00210 Ferritin-like domain 24 162 8.2E-25 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 SUPERFAMILY SSF47240 9 162 8.12E-44 T 29-03-2018 IPR009078 Ferritin-like superfamily CPU03_RS01000 a9a28b6bed135ceac38d5226af696e97 162 ProSitePatterns PS00818 Dps protein family signature 1. 44 60 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 SUPERFAMILY SSF100950 65 89 1.42E-40 T 29-03-2018 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 SUPERFAMILY SSF100950 135 295 1.42E-40 T 29-03-2018 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 SUPERFAMILY SSF46548 274 391 1.92E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Pfam PF13183 4Fe-4S dicluster domain 310 376 8.0E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 453 2.2E-217 T 29-03-2018 IPR004452 4Fe-4S binding protein GO:0019516 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Pfam PF11870 Domain of unknown function (DUF3390) 395 468 7.9E-10 T 29-03-2018 IPR024569 4Fe-4S binding protein, C-terminal CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Gene3D G3DSA:1.10.1060.10 298 395 9.6E-15 T 29-03-2018 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Pfam PF02589 LUD domain 72 294 3.2E-54 T 29-03-2018 IPR003741 LUD domain CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Gene3D G3DSA:3.40.50.10420 64 137 2.5E-8 T 29-03-2018 CPU03_RS06415 3999e9e3aa05473c11d9b8065d70ab29 473 Gene3D G3DSA:3.40.50.10420 138 295 2.2E-44 T 29-03-2018 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Gene3D G3DSA:2.40.50.140 8 143 0.0031 T 29-03-2018 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Pfam PF00773 RNB domain 191 518 2.4E-86 T 29-03-2018 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SUPERFAMILY SSF50249 8 80 6.78E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Pfam PF08206 Ribonuclease B OB domain 24 80 1.4E-17 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Gene3D G3DSA:2.40.50.140 563 646 1.2E-4 T 29-03-2018 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 ProSitePatterns PS01175 Ribonuclease II family signature. 486 510 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 645 45.85 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 9.9E-222 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SMART SM00357 23 79 1.7E-12 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 Pfam PF00575 S1 RNA binding domain 566 641 2.1E-9 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SMART SM00955 191 519 5.2E-125 T 29-03-2018 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SUPERFAMILY SSF50249 83 173 1.11E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 644 0.0 T 29-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SUPERFAMILY SSF50249 563 643 1.43E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00510 2e2beb7a435b5df4c1f239ab2e3d1858 647 SUPERFAMILY SSF50249 183 558 1.27E-114 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00470 9481fdf34c7e003911cf463a8311e165 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 1.6E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00470 9481fdf34c7e003911cf463a8311e165 296 SUPERFAMILY SSF161098 91 274 1.57E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00470 9481fdf34c7e003911cf463a8311e165 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.3E-10 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CPU03_RS00470 9481fdf34c7e003911cf463a8311e165 296 Gene3D G3DSA:1.10.3720.10 13 285 4.2E-28 T 29-03-2018 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 Pfam PF08220 DeoR-like helix-turn-helix domain 2 50 1.1E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 Gene3D G3DSA:3.40.50.1360 63 247 1.4E-40 T 29-03-2018 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 Gene3D G3DSA:1.10.10.10 3 62 3.4E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 SMART SM00420 2 51 4.4E-10 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 SMART SM01134 66 227 1.7E-69 T 29-03-2018 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 17 31 1.8E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 31 49 1.8E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 SUPERFAMILY SSF100950 68 229 4.02E-31 T 29-03-2018 CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 Pfam PF00455 DeoR C terminal sensor domain 69 226 2.2E-51 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS12770 33ae2d5aac04a2f66b8614d365a8e5c5 250 SUPERFAMILY SSF46785 2 50 5.79E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Pfam PF01493 GXGXG motif 1235 1414 3.9E-76 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 SUPERFAMILY SSF69336 1211 1464 5.36E-87 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 1.0E-176 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 SUPERFAMILY SSF56235 12 428 9.26E-149 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 SUPERFAMILY SSF51395 434 1189 9.62E-252 T 29-03-2018 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Gene3D G3DSA:2.160.20.60 1210 1484 1.7E-95 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1156 9.5E-154 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Gene3D G3DSA:3.20.20.70 778 1204 1.1E-144 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Gene3D G3DSA:3.60.20.10 12 436 5.9E-145 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Pfam PF04898 Glutamate synthase central domain 456 736 8.3E-106 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CPU03_RS05215 73bea2bd3efba9e8ad1b92dc06886816 1485 Gene3D G3DSA:3.20.20.70 438 777 1.4E-83 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 SUPERFAMILY SSF52540 77 348 8.47E-90 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08100 693d84caa11270d27f736994d6878569 460 SUPERFAMILY SSF47917 345 459 1.67E-55 T 29-03-2018 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Gene3D G3DSA:3.40.50.300 76 347 4.9E-90 T 29-03-2018 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 1.1E-63 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Gene3D G3DSA:1.10.1140.10 348 458 3.5E-45 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 SMART SM00382 142 327 1.8E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08100 693d84caa11270d27f736994d6878569 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 SUPERFAMILY SSF50615 1 75 7.32E-25 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.74 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.8E-262 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 1.2E-19 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS08100 693d84caa11270d27f736994d6878569 460 Gene3D G3DSA:2.40.10.170 1 75 1.0E-30 T 29-03-2018 CPU03_RS16755 3fa077d842bb2fb7d621a8cf132e601d 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS16755 3fa077d842bb2fb7d621a8cf132e601d 313 Pfam PF00294 pfkB family carbohydrate kinase 10 294 1.2E-40 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS16755 3fa077d842bb2fb7d621a8cf132e601d 313 SUPERFAMILY SSF53613 9 305 1.08E-55 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS16755 3fa077d842bb2fb7d621a8cf132e601d 313 Gene3D G3DSA:3.40.1190.20 2 309 3.4E-56 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 375 8.0E-130 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 PIRSF PIRSF000390 1 381 9.6E-112 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 Gene3D G3DSA:3.40.640.10 3 245 3.8E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 381 69.739 T 29-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 SUPERFAMILY SSF53383 4 379 2.6E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS01980 2aafff1ecdd517c78542e6140d88f019 381 Gene3D G3DSA:3.90.1150.10 246 381 2.0E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS14360 4cc9e0b95f2267f24a302ed76f84d623 215 SMART SM00849 12 192 5.1E-36 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14360 4cc9e0b95f2267f24a302ed76f84d623 215 Gene3D G3DSA:3.60.15.10 1 214 7.8E-44 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14360 4cc9e0b95f2267f24a302ed76f84d623 215 SUPERFAMILY SSF56281 2 209 3.41E-58 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS14360 4cc9e0b95f2267f24a302ed76f84d623 215 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 1.4E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS07055 0ea073d5b30f5f539ede3b26a9dcf6e3 642 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 150 604 55.322 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CPU03_RS07055 0ea073d5b30f5f539ede3b26a9dcf6e3 642 Pfam PF01964 Radical SAM ThiC family 152 599 9.2E-195 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CPU03_RS07055 0ea073d5b30f5f539ede3b26a9dcf6e3 642 Pfam PF13667 ThiC-associated domain 30 111 3.6E-32 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CPU03_RS07055 0ea073d5b30f5f539ede3b26a9dcf6e3 642 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 150 601 6.4E-217 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CPU03_RS15070 9e8a6ae6c581544b1c8c5bc94629424e 264 SUPERFAMILY SSF53800 2 257 1.83E-78 T 29-03-2018 CPU03_RS15070 9e8a6ae6c581544b1c8c5bc94629424e 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 4.7E-99 T 29-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CPU03_RS15070 9e8a6ae6c581544b1c8c5bc94629424e 264 PIRSF PIRSF033579 1 264 1.9E-102 T 29-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CPU03_RS15070 9e8a6ae6c581544b1c8c5bc94629424e 264 Gene3D G3DSA:3.40.50.1400 1 124 1.1E-12 T 29-03-2018 CPU03_RS15070 9e8a6ae6c581544b1c8c5bc94629424e 264 Gene3D G3DSA:3.40.50.1400 125 236 5.6E-22 T 29-03-2018 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 Gene3D G3DSA:1.10.560.10 1 185 3.4E-44 T 29-03-2018 IPR027413 GroEL-like equatorial domain CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 Gene3D G3DSA:3.50.7.10 186 373 1.4E-96 T 29-03-2018 IPR027409 GroEL-like apical domain CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 SUPERFAMILY SSF54849 137 203 3.2E-24 T 29-03-2018 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 SUPERFAMILY SSF52029 185 376 1.48E-82 T 29-03-2018 IPR027409 GroEL-like apical domain CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 8.6E-256 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 SUPERFAMILY SSF48592 406 521 4.12E-79 T 29-03-2018 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 SUPERFAMILY SSF48592 7 134 4.12E-79 T 29-03-2018 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 Gene3D G3DSA:1.10.560.10 374 516 6.3E-25 T 29-03-2018 IPR027413 GroEL-like equatorial domain CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.678 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CPU03_RS06430 4c209c35c9e51b239514a7ec5f205f18 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.0E-94 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 184 4.0E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 6.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 SUPERFAMILY SSF56784 3 189 8.12E-41 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 Gene3D G3DSA:1.10.150.240 18 79 1.3E-16 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 82 184 5.9E-9 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07860 f91853c6bf672a82c9badeeeab4df451 198 Gene3D G3DSA:3.40.50.1000 80 196 3.2E-19 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 SUPERFAMILY SSF46785 10 81 1.92E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 SMART SM00345 18 77 1.9E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 Gene3D G3DSA:1.20.120.530 95 226 4.5E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 SUPERFAMILY SSF48008 107 224 1.96E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 SMART SM00895 106 227 2.6E-16 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 Gene3D G3DSA:1.10.10.10 1 79 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 1.6E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 Pfam PF07729 FCD domain 108 225 9.6E-23 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS07985 9c0ba2cdc2b162ff8df264dd1ab08148 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 Gene3D G3DSA:3.40.47.10 261 413 6.1E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.5E-41 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.4E-62 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 SMART SM00825 Beta-ketoacyl synthase 6 413 1.4E-15 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 SUPERFAMILY SSF53901 3 252 9.52E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.1E-195 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 PIRSF PIRSF000447 1 413 8.7E-202 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 SUPERFAMILY SSF53901 215 412 1.1E-74 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14595 7f3aa793a23fcae99e156a7e5e97d6c3 413 Gene3D G3DSA:3.40.47.10 6 260 1.5E-80 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 SUPERFAMILY SSF81593 814 940 2.98E-32 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 SUPERFAMILY SSF81593 284 433 1.33E-44 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:1.20.120.330 282 437 8.5E-50 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Pfam PF08335 GlnD PII-uridylyltransferase 822 914 5.3E-12 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Pfam PF08335 GlnD PII-uridylyltransferase 294 433 1.1E-45 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 SUPERFAMILY SSF81301 523 812 6.54E-90 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:3.30.460.10 635 808 9.3E-59 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:3.30.460.10 108 281 3.1E-57 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:1.20.120.330 809 943 4.9E-37 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 24 942 19.843 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:1.10.4050.10 523 634 6.9E-24 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Gene3D G3DSA:1.10.4050.10 2 105 5.7E-17 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 SUPERFAMILY SSF81301 25 283 2.78E-87 T 29-03-2018 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 30 267 7.5E-92 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CPU03_RS05515 713ed862ea6e747a5ec1f17383591859 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 551 801 4.5E-98 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 PIRSF PIRSF003135 1 102 6.2E-47 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 100 8.0E-36 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 Gene3D G3DSA:2.40.50.140 3 105 3.6E-9 T 29-03-2018 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 Pfam PF00436 Single-strand binding protein family 4 83 1.7E-9 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 24.11 T 29-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CPU03_RS06215 29799a9cb583bf9dfdacddb1d255b8dc 105 SUPERFAMILY SSF50249 2 104 3.32E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 Gene3D G3DSA:3.20.20.210 388 756 2.1E-123 T 29-03-2018 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 755 36.813 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 PIRSF PIRSF000382 2 760 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 SUPERFAMILY SSF51726 5 391 3.92E-114 T 29-03-2018 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 1.4E-121 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 428 750 1.3E-147 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 755 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 Gene3D G3DSA:3.20.20.210 3 387 2.2E-140 T 29-03-2018 CPU03_RS07265 d4c8a8449352610c994b57b28409bfde 761 SUPERFAMILY SSF51726 394 755 3.4E-113 T 29-03-2018 CPU03_RS16210 da50f08a95b19b64133166fdc19ca813 383 PIRSF PIRSF003085 1 377 1.2E-122 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CPU03_RS16210 da50f08a95b19b64133166fdc19ca813 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.2E-98 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS16210 da50f08a95b19b64133166fdc19ca813 383 Gene3D G3DSA:3.40.50.150 104 372 2.4E-63 T 29-03-2018 CPU03_RS16210 da50f08a95b19b64133166fdc19ca813 383 SUPERFAMILY SSF53335 117 370 1.97E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 Pfam PF00171 Aldehyde dehydrogenase family 19 478 9.2E-169 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 SUPERFAMILY SSF53720 7 482 4.32E-170 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 Gene3D G3DSA:3.40.309.10 274 465 2.4E-72 T 29-03-2018 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 477 3.2E-204 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 Gene3D G3DSA:3.40.605.10 6 273 2.9E-102 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS15380 3029e7a6c730ea6d88c0795a91272070 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Pfam PF16921 Tex protein YqgF-like domain 327 450 6.5E-51 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Gene3D G3DSA:1.10.10.650 2 101 5.7E-34 T 29-03-2018 IPR023319 Tex-like protein, HTH domain CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Gene3D G3DSA:2.40.50.140 642 724 5.4E-26 T 29-03-2018 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.4E-68 T 29-03-2018 IPR018974 Tex-like protein, N-terminal CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SUPERFAMILY SSF158832 5 321 1.57E-117 T 29-03-2018 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SMART SM00316 648 719 2.6E-26 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SUPERFAMILY SSF53098 322 468 4.3E-49 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Gene3D G3DSA:1.10.150.310 498 629 2.1E-42 T 29-03-2018 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Gene3D G3DSA:1.10.3500.10 358 497 2.3E-39 T 29-03-2018 IPR023323 Tex-like domain CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Pfam PF00575 S1 RNA binding domain 647 719 1.3E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SMART SM00732 326 423 2.7E-35 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.5E-27 T 29-03-2018 CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 Gene3D G3DSA:1.10.3500.10 102 357 7.3E-78 T 29-03-2018 IPR023323 Tex-like domain CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SUPERFAMILY SSF47781 559 631 1.18E-18 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SUPERFAMILY SSF47781 469 556 5.11E-28 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS09135 32ce5c1510ae99328642d2e483c605ed 779 SUPERFAMILY SSF50249 637 721 2.54E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06295 315163f6656739d46f3992b82bef713a 103 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CPU03_RS06295 315163f6656739d46f3992b82bef713a 103 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CPU03_RS06295 315163f6656739d46f3992b82bef713a 103 Gene3D G3DSA:2.30.30.100 4 73 1.4E-33 T 29-03-2018 CPU03_RS06295 315163f6656739d46f3992b82bef713a 103 SUPERFAMILY SSF50182 7 69 4.24E-24 T 29-03-2018 IPR010920 LSM domain CPU03_RS06295 315163f6656739d46f3992b82bef713a 103 Pfam PF17209 Hfq protein 7 69 5.0E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 Pfam PF02796 Helix-turn-helix domain of resolvase 138 182 1.2E-12 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 SUPERFAMILY SSF53041 2 135 6.8E-48 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 SMART SM00857 2 136 8.1E-64 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 Gene3D G3DSA:1.10.10.60 138 189 3.8E-8 T 29-03-2018 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 SUPERFAMILY SSF46689 138 184 5.38E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 Gene3D G3DSA:1.20.5.40 107 134 7.0E-21 T 29-03-2018 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 Pfam PF00239 Resolvase, N terminal domain 3 135 8.4E-50 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS00075 cfa5f52072f16c81fe138086e50ebc4e 195 Gene3D G3DSA:3.40.50.1390 2 106 3.1E-35 T 29-03-2018 CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 362 2.3E-152 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 362 50.195 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 Gene3D G3DSA:3.90.1150.10 261 361 2.6E-34 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 Pfam PF00266 Aminotransferase class-V 4 351 3.4E-62 T 29-03-2018 IPR000192 Aminotransferase class V domain CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 209 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 SUPERFAMILY SSF53383 3 363 5.17E-112 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 Gene3D G3DSA:3.40.640.10 16 260 8.8E-28 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS14240 06dcb624d9674af581d827371a7c9439 363 PIRSF PIRSF000525 1 363 2.1E-144 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 SUPERFAMILY SSF52540 3 235 1.94E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 Pfam PF00005 ABC transporter 20 170 3.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 PIRSF PIRSF039085 1 242 7.5E-83 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 SMART SM00382 27 218 1.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13970 468d9b53fed0cbd8a421ec1a9301ef86 242 Gene3D G3DSA:3.40.50.300 1 242 2.3E-65 T 29-03-2018 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 Pfam PF08402 TOBE domain 294 366 2.5E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 Gene3D G3DSA:3.40.50.300 16 307 2.2E-70 T 29-03-2018 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 Gene3D G3DSA:2.40.50.140 308 360 1.6E-6 T 29-03-2018 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 Pfam PF00005 ABC transporter 34 176 3.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 SMART SM00382 43 243 4.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 TIGRFAM TIGR03258 PhnT: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 13 368 2.1E-180 T 29-03-2018 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT GO:0005524|GO:0006810|GO:0016020 CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 SUPERFAMILY SSF52540 19 258 1.77E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15430 fba14cdca85443746768b3085b24d817 370 SUPERFAMILY SSF50331 253 367 1.43E-13 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 PIRSF PIRSF000370 1 223 1.6E-67 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 222 3.0E-103 T 29-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 Pfam PF04055 Radical SAM superfamily 27 124 3.5E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 Gene3D G3DSA:3.80.30.20 22 219 1.3E-12 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 SUPERFAMILY SSF102114 24 117 5.76E-7 T 29-03-2018 CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.292 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CPU03_RS03100 16d98b87d3aeb9e262aecac435b4753e 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 2.8E-11 T 29-03-2018 CPU03_RS10020 03f02a4c6936af77ddbd254efeb4698b 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 2.2E-33 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CPU03_RS10020 03f02a4c6936af77ddbd254efeb4698b 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.334 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CPU03_RS10020 03f02a4c6936af77ddbd254efeb4698b 143 SUPERFAMILY SSF89946 3 122 3.79E-39 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CPU03_RS10020 03f02a4c6936af77ddbd254efeb4698b 143 PIRSF PIRSF018193 1 143 3.8E-63 T 29-03-2018 IPR016716 Regulator of ribonuclease activity B CPU03_RS10020 03f02a4c6936af77ddbd254efeb4698b 143 Gene3D G3DSA:3.30.70.970 3 116 2.7E-40 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain CPU03_RS06845 6c5517725daac80d28cfe3a8288dc815 304 Gene3D G3DSA:3.20.20.70 4 269 0.0028 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS06845 6c5517725daac80d28cfe3a8288dc815 304 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 23 295 2.2E-104 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CPU03_RS06845 6c5517725daac80d28cfe3a8288dc815 304 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 25 293 9.7E-85 T 29-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CPU03_RS06845 6c5517725daac80d28cfe3a8288dc815 304 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 2 304 179.43 T 29-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 Gene3D G3DSA:3.40.50.720 2 115 2.2E-31 T 29-03-2018 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 Gene3D G3DSA:3.40.50.720 116 300 6.3E-52 T 29-03-2018 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 SUPERFAMILY SSF52283 2 135 6.8E-46 T 29-03-2018 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.3E-54 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 SUPERFAMILY SSF51735 102 298 2.79E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS16620 34a51f78446630a1bcae40dcb9527724 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 327 2.7E-34 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 SUPERFAMILY SSF50129 1 144 2.74E-45 T 29-03-2018 IPR011032 GroES-like CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 Gene3D G3DSA:3.90.180.10 1 138 1.0E-26 T 29-03-2018 CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 SUPERFAMILY SSF51735 115 288 4.65E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 SMART SM00829 11 322 1.8E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.7E-137 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 5.0E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 Pfam PF00107 Zinc-binding dehydrogenase 158 269 2.1E-16 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CPU03_RS09875 2daa5e312fdee30a3fab3161951bfb1e 325 Gene3D G3DSA:3.40.50.720 139 292 1.4E-23 T 29-03-2018 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Gene3D G3DSA:3.90.600.10 330 424 4.9E-30 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.928 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 SUPERFAMILY SSF56059 104 321 8.13E-68 T 29-03-2018 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Gene3D G3DSA:3.40.50.20 2 95 2.6E-38 T 29-03-2018 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Gene3D G3DSA:3.30.1490.20 134 189 2.8E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 SMART SM01209 103 296 8.0E-144 T 29-03-2018 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.7E-35 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.5E-83 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 SMART SM01210 330 423 1.2E-47 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 SUPERFAMILY SSF51246 329 423 1.26E-29 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.9E-178 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Gene3D G3DSA:3.30.470.20 191 329 6.3E-61 T 29-03-2018 CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 SUPERFAMILY SSF52440 1 103 1.44E-36 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS07020 327bfb60ccb800d73be44c69bb7cf1bf 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.5E-26 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS13305 19560e35566cd9e0f8ca936986ad1d89 146 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 7.9E-31 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13305 19560e35566cd9e0f8ca936986ad1d89 146 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.61 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06210 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09920 21020481d59394ca93d2bbb0594bbe38 481 SUPERFAMILY SSF111283 20 480 8.89E-129 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CPU03_RS09920 21020481d59394ca93d2bbb0594bbe38 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.3E-67 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CPU03_RS09920 21020481d59394ca93d2bbb0594bbe38 481 Gene3D G3DSA:3.30.2290.10 14 240 9.1E-54 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CPU03_RS09920 21020481d59394ca93d2bbb0594bbe38 481 PIRSF PIRSF004919 14 481 3.5E-145 T 29-03-2018 IPR025502 TldD CPU03_RS14995 a971b30c2312babc71d5954571b3cba9 330 Pfam PF01032 FecCD transport family 14 326 3.1E-88 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CPU03_RS14995 a971b30c2312babc71d5954571b3cba9 330 Gene3D G3DSA:1.10.3470.10 1 330 2.9E-74 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS14995 a971b30c2312babc71d5954571b3cba9 330 SUPERFAMILY SSF81345 3 326 1.31E-78 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 SUPERFAMILY SSF53335 12 189 5.19E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 Gene3D G3DSA:3.40.50.150 1 201 5.6E-39 T 29-03-2018 CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 9.7E-63 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 PIRSF PIRSF004553 12 192 2.2E-55 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS08935 22889ef551129e7fad031d7eb674c4c3 204 Pfam PF03602 Conserved hypothetical protein 95 13 188 2.0E-58 T 29-03-2018 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 236 6.8E-13 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 PIRSF PIRSF003095 1 433 6.1E-129 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.4E-41 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 SUPERFAMILY SSF102735 1 131 6.54E-39 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Gene3D G3DSA:3.10.50.40 157 226 6.0E-13 T 29-03-2018 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Gene3D G3DSA:1.10.3120.10 227 389 6.6E-47 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.615 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 SUPERFAMILY SSF109998 249 429 6.28E-47 T 29-03-2018 IPR027304 Trigger factor/SurA domain CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 TIGRFAM TIGR00115 tig: trigger factor 13 412 2.5E-141 T 29-03-2018 IPR005215 Trigger factor GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 8.3E-40 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 SUPERFAMILY SSF54534 91 241 6.68E-37 T 29-03-2018 CPU03_RS03350 db453460f937eac8cf30532c49d05cd6 433 Gene3D G3DSA:3.30.70.1050 1 118 9.0E-36 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CPU03_RS00275 88cd611b35f128af79c5c85c8d410904 122 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 91 6.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS00275 88cd611b35f128af79c5c85c8d410904 122 SUPERFAMILY SSF46785 15 110 1.97E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00275 88cd611b35f128af79c5c85c8d410904 122 Gene3D G3DSA:1.10.10.10 12 116 4.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:3.30.70.20 129 227 0.025 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Pfam PF00384 Molybdopterin oxidoreductase 566 638 1.3E-7 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 660 1.4E-200 T 29-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:2.20.25.90 228 280 7.4E-10 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:2.40.40.20 827 906 4.9E-14 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SUPERFAMILY SSF54292 1 77 4.69E-19 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SUPERFAMILY SSF50692 817 895 4.75E-13 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.3E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:3.10.20.30 1 92 6.5E-7 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 9.1E-15 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SMART SM00929 88 128 1.9E-18 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Pfam PF01568 Molydopterin dinucleotide binding domain 829 893 1.0E-7 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SUPERFAMILY SSF54862 81 213 1.59E-34 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:3.40.50.740 281 418 2.8E-9 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Gene3D G3DSA:3.40.50.740 478 696 8.1E-18 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.5E-11 T 29-03-2018 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SMART SM00926 221 275 6.1E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13330 c27e2ec6eda4ac6f67a6e703aa03806e 911 SUPERFAMILY SSF53706 219 694 9.09E-82 T 29-03-2018 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 SUPERFAMILY SSF53822 61 330 1.79E-88 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 SMART SM00354 2 72 2.1E-28 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 SUPERFAMILY SSF47413 2 58 9.64E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.6E-45 T 29-03-2018 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 Gene3D G3DSA:3.40.50.2300 56 176 7.6E-30 T 29-03-2018 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 6.1E-19 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 Gene3D G3DSA:1.10.260.40 3 55 1.1E-19 T 29-03-2018 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 Gene3D G3DSA:3.40.50.2300 177 312 1.1E-46 T 29-03-2018 CPU03_RS08505 879e010fd5059179b322ec2a9411e243 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 29-03-2018 CPU03_RS02085 982b32329ff33da42b092dc203780744 172 Gene3D G3DSA:3.10.129.10 1 172 1.2E-50 T 29-03-2018 CPU03_RS02085 982b32329ff33da42b092dc203780744 172 SUPERFAMILY SSF54637 3 169 1.49E-56 T 29-03-2018 IPR029069 HotDog domain CPU03_RS02085 982b32329ff33da42b092dc203780744 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 50.611 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS02085 982b32329ff33da42b092dc203780744 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.2E-93 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS02085 982b32329ff33da42b092dc203780744 172 Pfam PF07977 FabA-like domain 29 158 1.5E-53 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS02065 e1b64db8a9fd6b9fab286bae3873b499 165 SUPERFAMILY SSF52540 30 145 2.87E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02065 e1b64db8a9fd6b9fab286bae3873b499 165 Gene3D G3DSA:3.40.50.300 31 144 3.7E-22 T 29-03-2018 CPU03_RS02065 e1b64db8a9fd6b9fab286bae3873b499 165 Pfam PF03846 Cell division inhibitor SulA 24 118 6.8E-37 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CPU03_RS02065 e1b64db8a9fd6b9fab286bae3873b499 165 PIRSF PIRSF003093 2 165 2.5E-49 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 Gene3D G3DSA:3.40.980.10 1 172 4.6E-39 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 SMART SM00852 5 172 2.0E-37 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 5.8E-28 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 PIRSF PIRSF006728 1 385 5.2E-95 T 29-03-2018 IPR008135 Competence-induced protein CinA CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 380 1.2E-99 T 29-03-2018 IPR008135 Competence-induced protein CinA CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 SUPERFAMILY SSF53218 1 203 4.58E-36 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 Pfam PF00994 Probable molybdopterin binding domain 6 170 5.5E-30 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS13465 618ca821a8a57e0a510e93d80350ea5e 400 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 400 99.524 T 29-03-2018 IPR008135 Competence-induced protein CinA CPU03_RS13735 6ae08dd7e8d1dce0642ec9f7ef326360 519 SMART SM00052 258 504 3.5E-97 T 29-03-2018 IPR001633 EAL domain CPU03_RS13735 6ae08dd7e8d1dce0642ec9f7ef326360 519 Gene3D G3DSA:3.20.20.450 262 516 2.7E-80 T 29-03-2018 IPR001633 EAL domain CPU03_RS13735 6ae08dd7e8d1dce0642ec9f7ef326360 519 Pfam PF12792 CSS motif domain associated with EAL 44 233 1.4E-36 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CPU03_RS13735 6ae08dd7e8d1dce0642ec9f7ef326360 519 SUPERFAMILY SSF141868 265 511 2.88E-78 T 29-03-2018 IPR001633 EAL domain CPU03_RS13735 6ae08dd7e8d1dce0642ec9f7ef326360 519 Pfam PF00563 EAL domain 266 499 2.2E-66 T 29-03-2018 IPR001633 EAL domain CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:3.40.50.1010 7 184 3.2E-69 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SUPERFAMILY SSF88723 7 170 4.91E-58 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SUPERFAMILY SSF47807 171 290 1.94E-28 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SMART SM00474 331 518 9.6E-47 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:1.20.1060.10 544 658 1.5E-28 T 29-03-2018 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SUPERFAMILY SSF53098 334 518 8.13E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.0E-55 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Pfam PF00476 DNA polymerase family A 553 927 9.7E-156 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:3.30.420.10 321 543 4.3E-51 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 8.0E-285 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:3.30.70.370 659 755 1.5E-19 T 29-03-2018 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:3.30.70.370 756 930 6.5E-53 T 29-03-2018 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 4.7E-80 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SUPERFAMILY SSF56672 525 930 1.78E-156 T 29-03-2018 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SMART SM00279 173 208 9.2E-13 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SMART SM00482 688 894 1.1E-122 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Gene3D G3DSA:1.10.150.20 185 269 1.4E-22 T 29-03-2018 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Pfam PF01612 3'-5' exonuclease 331 518 1.3E-42 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.1E-27 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CPU03_RS07915 1bbaa7e8019a4e355ae16f1eea708123 930 SMART SM00475 7 268 2.9E-139 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 SUPERFAMILY SSF58104 232 513 2.49E-76 T 29-03-2018 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Gene3D G3DSA:1.10.287.1060 241 324 0.02 T 29-03-2018 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 SMART SM00319 44 175 3.2E-12 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Gene3D G3DSA:1.20.120.30 23 186 5.7E-31 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 SMART SM00304 212 264 1.1E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 29-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Pfam PF02203 Tar ligand binding domain homologue 2 166 2.7E-40 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 480 3.6E-56 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Pfam PF00672 HAMP domain 214 259 1.0E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 SUPERFAMILY SSF47170 25 172 1.57E-32 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 SMART SM00283 265 512 2.0E-99 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.1E-83 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01765 64b85ee275afd480cc6dc58f90080916 525 Gene3D G3DSA:1.10.287.950 325 516 4.9E-52 T 29-03-2018 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Gene3D G3DSA:3.40.50.300 7 121 9.0E-5 T 29-03-2018 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.6E-229 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Gene3D G3DSA:1.10.8.10 201 243 2.5E-17 T 29-03-2018 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Gene3D G3DSA:1.10.8.10 122 200 6.7E-30 T 29-03-2018 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Gene3D G3DSA:1.10.8.60 335 431 1.5E-30 T 29-03-2018 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.2E-5 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 SUPERFAMILY SSF52540 3 441 1.06E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 SMART SM01086 335 434 1.8E-23 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 105 8.2E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 SMART SM00382 49 332 1.5E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 186 329 3.9E-41 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS08490 df0f7a63d394d01f10ae241fd632e5b6 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.178 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Gene3D G3DSA:3.40.50.10490 259 512 5.3E-127 T 29-03-2018 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.9E-55 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Gene3D G3DSA:3.40.50.10490 1 144 3.3E-51 T 29-03-2018 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Gene3D G3DSA:3.40.50.10490 145 258 1.1E-53 T 29-03-2018 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.884 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 SUPERFAMILY SSF53697 5 548 1.11E-228 T 29-03-2018 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Gene3D G3DSA:1.10.1390.10 513 549 9.5E-22 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06920 5451901ba44f2a8308dedba9721ba618 549 Pfam PF00342 Phosphoglucose isomerase 52 541 4.1E-255 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 PIRSF PIRSF009393 1 712 3.6E-283 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 SUPERFAMILY SSF55904 567 707 6.28E-42 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.4E-188 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 4.0E-26 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Gene3D G3DSA:3.90.100.10 595 715 3.9E-35 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Gene3D G3DSA:3.40.640.10 130 424 2.6E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 SUPERFAMILY SSF53383 130 562 1.25E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Gene3D G3DSA:3.90.1150.10 425 594 1.5E-57 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 699 2.0E-44 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS06570 d01daa14c31691eaab485bc674c32243 716 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS16735 d5d8f61c6d8f8b1e308242c49727db8e 277 SUPERFAMILY SSF53807 22 270 2.98E-51 T 29-03-2018 CPU03_RS16735 d5d8f61c6d8f8b1e308242c49727db8e 277 Gene3D G3DSA:3.40.50.1980 129 276 2.4E-28 T 29-03-2018 CPU03_RS16735 d5d8f61c6d8f8b1e308242c49727db8e 277 Gene3D G3DSA:3.40.50.1980 21 128 9.0E-28 T 29-03-2018 CPU03_RS16735 d5d8f61c6d8f8b1e308242c49727db8e 277 Pfam PF01497 Periplasmic binding protein 26 249 7.4E-33 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 Gene3D G3DSA:3.20.20.70 9 240 2.8E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 12 240 39.707 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 SUPERFAMILY SSF51366 12 238 8.04E-80 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 16 235 1.5E-52 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 234 1.0E-51 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS14645 5d9b364e7fc6bbbba38f91acc0c57236 240 SMART SM00934 14 235 2.2E-99 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Gene3D G3DSA:2.40.50.140 76 148 0.26 T 29-03-2018 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Pfam PF00773 RNB domain 260 587 3.8E-107 T 29-03-2018 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SUPERFAMILY SSF50249 644 724 1.48E-21 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Gene3D G3DSA:1.10.10.10 16 75 1.9E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SUPERFAMILY SSF50249 221 642 7.42E-142 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SUPERFAMILY SSF50249 140 236 1.9E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SMART SM00316 642 725 1.7E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.111 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Pfam PF00575 S1 RNA binding domain 642 723 3.6E-16 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SMART SM00955 260 588 2.8E-180 T 29-03-2018 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Gene3D G3DSA:2.40.50.140 641 726 1.0E-20 T 29-03-2018 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SUPERFAMILY SSF50249 67 147 4.46E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 4.7E-279 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 3.5E-273 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Pfam PF08461 Ribonuclease R winged-helix domain 23 84 7.6E-17 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SMART SM00357 152 214 6.3 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 SMART SM00357 86 145 2.1E-15 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS06255 c9c7cf15b4386546eda4e0725225f86a 816 Pfam PF08206 Ribonuclease B OB domain 87 144 1.3E-23 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CPU03_RS08980 60c6a63c14e58f5dbfa78db334209898 439 Pfam PF13416 Bacterial extracellular solute-binding protein 45 366 1.7E-39 T 29-03-2018 CPU03_RS08980 60c6a63c14e58f5dbfa78db334209898 439 SUPERFAMILY SSF53850 27 424 7.41E-72 T 29-03-2018 CPU03_RS08980 60c6a63c14e58f5dbfa78db334209898 439 Gene3D G3DSA:3.40.190.10 143 435 6.6E-43 T 29-03-2018 CPU03_RS08980 60c6a63c14e58f5dbfa78db334209898 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 SMART SM00421 146 203 1.1E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 Gene3D G3DSA:3.40.50.2300 1 125 2.2E-33 T 29-03-2018 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 SUPERFAMILY SSF52172 3 131 1.11E-33 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 SUPERFAMILY SSF46894 136 210 1.6E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.0E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 SMART SM00448 2 115 5.6E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14820 0aa13e074ab8279a29cea6b209258a01 218 Gene3D G3DSA:1.10.10.10 126 213 9.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 1.0E-18 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 SMART SM00490 505 589 1.0E-23 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Pfam PF17191 RecG wedge domain 14 171 9.2E-21 T 29-03-2018 IPR033454 RecG, wedge domain CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 SUPERFAMILY SSF52540 208 453 1.84E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Pfam PF00270 DEAD/DEAH box helicase 293 433 1.5E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Gene3D G3DSA:2.40.50.140 55 143 2.4E-14 T 29-03-2018 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Gene3D G3DSA:1.10.150.20 3 54 2.9E-4 T 29-03-2018 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 5.0E-243 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Gene3D G3DSA:3.40.50.300 250 456 4.8E-37 T 29-03-2018 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 SUPERFAMILY SSF52540 452 654 4.31E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 Gene3D G3DSA:3.40.50.300 457 630 6.8E-29 T 29-03-2018 CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 SUPERFAMILY SSF50249 9 174 5.82E-42 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS08325 e410ece33b6f61a03f20d59cc89775b8 693 SMART SM00487 265 459 9.8E-28 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 191 1.8E-14 T 29-03-2018 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 SUPERFAMILY SSF48498 79 190 4.19E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.0E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 Gene3D G3DSA:1.10.10.60 7 60 2.1E-14 T 29-03-2018 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 SUPERFAMILY SSF46689 4 75 2.26E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS15320 676884589172c1565fed79929d66e8f9 192 Gene3D G3DSA:1.10.357.10 61 188 3.4E-14 T 29-03-2018 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 SUPERFAMILY SSF55021 248 343 1.95E-26 T 29-03-2018 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 Gene3D G3DSA:3.40.50.300 1 252 6.5E-77 T 29-03-2018 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 Pfam PF00005 ABC transporter 21 169 3.0E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 Pfam PF09383 NIL domain 268 339 3.3E-21 T 29-03-2018 IPR018449 NIL domain CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 SMART SM00382 30 218 3.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 7.9E-194 T 29-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 Gene3D G3DSA:3.30.70.260 253 343 7.3E-28 T 29-03-2018 CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 SUPERFAMILY SSF52540 1 240 7.48E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05080 3039d8c679eaacfecc05bfc131f0bee9 343 SMART SM00930 265 340 4.0E-28 T 29-03-2018 IPR018449 NIL domain CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 382 1.1E-40 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 SMART SM00267 221 388 5.7E-60 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 Pfam PF17152 Periplasmic sensor domain 29 128 1.7E-24 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 SUPERFAMILY SSF55073 237 384 4.0E-43 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 Gene3D G3DSA:3.30.70.270 229 386 1.2E-51 T 29-03-2018 CPU03_RS15605 356c82388b73c0634a80b11a3f18e477 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 383 3.6E-45 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS07850 4f84d50bb857b1bc501cc259a021872d 145 Gene3D G3DSA:3.50.80.10 1 145 1.5E-54 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CPU03_RS07850 4f84d50bb857b1bc501cc259a021872d 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.868 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CPU03_RS07850 4f84d50bb857b1bc501cc259a021872d 145 SUPERFAMILY SSF69500 1 144 9.16E-57 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CPU03_RS07850 4f84d50bb857b1bc501cc259a021872d 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 2.3E-53 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CPU03_RS07850 4f84d50bb857b1bc501cc259a021872d 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.4E-70 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CPU03_RS02015 098512290b5b3ec80da48fbaff3d4d3c 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS02015 098512290b5b3ec80da48fbaff3d4d3c 92 Gene3D G3DSA:3.30.70.100 1 91 8.0E-28 T 29-03-2018 CPU03_RS02015 098512290b5b3ec80da48fbaff3d4d3c 92 Pfam PF00708 Acylphosphatase 7 90 1.9E-23 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS02015 098512290b5b3ec80da48fbaff3d4d3c 92 SUPERFAMILY SSF54975 3 92 7.85E-29 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS02015 098512290b5b3ec80da48fbaff3d4d3c 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 26.544 T 29-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS08035 245cefc567e609f825b8121112efcaea 484 Pfam PF05762 VWA domain containing CoxE-like protein 307 459 6.5E-13 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like CPU03_RS08035 245cefc567e609f825b8121112efcaea 484 Gene3D G3DSA:3.40.50.410 298 466 3.3E-21 T 29-03-2018 IPR002035 von Willebrand factor, type A CPU03_RS08035 245cefc567e609f825b8121112efcaea 484 SMART SM00327 320 484 3.9E-8 T 29-03-2018 IPR002035 von Willebrand factor, type A CPU03_RS08035 245cefc567e609f825b8121112efcaea 484 SUPERFAMILY SSF53300 317 460 4.96E-20 T 29-03-2018 IPR002035 von Willebrand factor, type A CPU03_RS08035 245cefc567e609f825b8121112efcaea 484 Hamap MF_01626 Protein ViaA [viaA]. 1 484 49.82 T 29-03-2018 IPR023481 Uncharacterised protein family ViaA CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.2E-53 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 Gene3D G3DSA:2.40.280.10 14 133 3.0E-45 T 29-03-2018 IPR023620 Small protein B CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.869 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-51 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 Pfam PF01668 SmpB protein 14 157 1.2E-56 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 CPU03_RS11670 4a757815e5a50e282637d6522e595bdd 160 SUPERFAMILY SSF74982 8 138 1.44E-49 T 29-03-2018 IPR023620 Small protein B CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.682 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 SUPERFAMILY SSF100950 1 264 3.56E-103 T 29-03-2018 CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.4E-139 T 29-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 230 2.6E-18 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 Gene3D G3DSA:3.40.50.1360 1 266 7.4E-85 T 29-03-2018 CPU03_RS12370 9b49ffd2bd74486696c08fa7537035a2 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 29-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 5.8E-77 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 Gene3D G3DSA:3.40.50.170 1 197 2.3E-71 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 Pfam PF00551 Formyl transferase 2 182 2.9E-62 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.295 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CPU03_RS02940 e04be1d08293f77e8b84376a843e39c5 212 SUPERFAMILY SSF53328 2 205 1.7E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 Gene3D G3DSA:3.20.20.70 4 294 2.4E-67 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 2.9E-203 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 PIRSF PIRSF009264 1 426 1.2E-202 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 Gene3D G3DSA:1.10.400.20 295 408 1.6E-47 T 29-03-2018 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 SUPERFAMILY SSF51569 4 423 1.05E-171 T 29-03-2018 CPU03_RS12775 0f6bb71839aa585c791e722300a5f291 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 1.7E-202 T 29-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CPU03_RS00055 82202885e8e259d4d7fd285a7e3777e7 257 Gene3D G3DSA:1.20.950.20 50 254 9.2E-32 T 29-03-2018 CPU03_RS00055 82202885e8e259d4d7fd285a7e3777e7 257 SUPERFAMILY SSF81342 54 245 1.02E-24 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS00055 82202885e8e259d4d7fd285a7e3777e7 257 Pfam PF01292 Prokaryotic cytochrome b561 59 240 4.5E-21 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS00535 fdd72d7857373f34f3ea35550dea239c 288 Gene3D G3DSA:1.10.3720.10 9 285 4.3E-44 T 29-03-2018 CPU03_RS00535 fdd72d7857373f34f3ea35550dea239c 288 SUPERFAMILY SSF161098 6 275 9.16E-54 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00535 fdd72d7857373f34f3ea35550dea239c 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 2.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PIRSF PIRSF000114 3 336 5.6E-100 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 3.9E-49 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 Gene3D G3DSA:1.10.1040.10 193 338 2.6E-54 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.378 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 SUPERFAMILY SSF51735 8 182 5.4E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 SUPERFAMILY SSF48179 184 335 3.46E-58 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.8E-43 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 Gene3D G3DSA:3.40.50.720 1 182 6.5E-41 T 29-03-2018 CPU03_RS08385 0b82adbcbdf6e483130fff8cb4bc27ac 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 7.3E-53 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 29-03-2018 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 3.6E-112 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 SUPERFAMILY SSF55257 179 231 9.13E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 SUPERFAMILY SSF55257 6 53 9.13E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 SUPERFAMILY SSF56553 53 178 7.5E-42 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 29-03-2018 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Gene3D G3DSA:3.30.1360.10 4 91 5.1E-19 T 29-03-2018 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Gene3D G3DSA:3.30.1360.10 119 231 3.2E-27 T 29-03-2018 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 SMART SM00662 23 234 4.3E-104 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.469 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS09505 17afcb3bd64efd332a2e390e418d6139 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.5E-23 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 SUPERFAMILY SSF50104 2 114 2.01E-47 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 Pfam PF01245 Ribosomal protein L19 3 113 1.1E-49 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 PIRSF PIRSF002191 1 115 5.7E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.441 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 7.8E-53 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11120 d1f6fa82bd91c17fb4b23d7e22631191 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 SUPERFAMILY SSF56059 1 237 6.14E-76 T 29-03-2018 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Gene3D G3DSA:3.30.1490.20 21 95 9.1E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 SUPERFAMILY SSF52210 240 385 4.58E-51 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Pfam PF08442 ATP-grasp domain 2 203 2.9E-80 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Gene3D G3DSA:3.40.50.261 240 385 7.4E-41 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.8E-176 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Gene3D G3DSA:3.30.470.20 96 239 2.2E-50 T 29-03-2018 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 PIRSF PIRSF001554 1 388 1.9E-151 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.187 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS12540 e20ebc017045e756fbcdaa454501349d 388 Pfam PF00549 CoA-ligase 262 382 2.3E-23 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Pfam PF01103 Surface antigen 448 795 1.8E-96 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:3.10.20.310 92 173 2.2E-13 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 795 26.021 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:3.10.20.310 266 346 6.3E-12 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Pfam PF07244 Surface antigen variable number repeat 266 344 6.8E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Pfam PF07244 Surface antigen variable number repeat 176 263 2.3E-14 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Pfam PF07244 Surface antigen variable number repeat 92 172 8.4E-11 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Pfam PF07244 Surface antigen variable number repeat 347 421 1.6E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 PIRSF PIRSF006076 1 795 2.9E-257 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:3.10.20.310 174 265 1.1E-20 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:3.10.20.310 21 91 2.8E-10 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:3.10.20.310 350 387 0.014 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 Gene3D G3DSA:2.40.160.50 388 795 1.3E-86 T 29-03-2018 CPU03_RS04150 5a92ac524acc17a91b613a65bf62ed15 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 795 1.7E-286 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 1.9E-82 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 3.8E-6 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 3.8E-6 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 3.8E-6 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Gene3D G3DSA:3.30.300.10 413 525 3.5E-52 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Gene3D G3DSA:3.40.50.880 9 199 4.3E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.4E-7 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.0E-154 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Pfam PF02540 NAD synthase 217 296 1.4E-6 T 29-03-2018 IPR022310 NAD/GMP synthase CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 SUPERFAMILY SSF52402 193 446 2.65E-57 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00097 Anthranilate synthase component II signature 10 24 9.9E-8 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 9.9E-8 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 9.9E-8 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 9.9E-8 T 29-03-2018 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.5E-40 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 SUPERFAMILY SSF52317 7 237 1.11E-55 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.664 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 Gene3D G3DSA:3.40.50.620 200 412 3.0E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS11435 b74cc5afa3f8768a85d7de4e35c75e12 525 SUPERFAMILY SSF54810 405 525 6.67E-51 T 29-03-2018 CPU03_RS12725 b154a7940edde5bd045b2868395c2fd8 256 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 251 1.5E-61 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CPU03_RS12725 b154a7940edde5bd045b2868395c2fd8 256 SUPERFAMILY SSF53335 14 195 1.7E-37 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS12725 b154a7940edde5bd045b2868395c2fd8 256 Gene3D G3DSA:3.40.50.150 2 240 7.2E-35 T 29-03-2018 CPU03_RS12725 b154a7940edde5bd045b2868395c2fd8 256 Pfam PF08241 Methyltransferase domain 52 143 2.2E-24 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CPU03_RS12725 b154a7940edde5bd045b2868395c2fd8 256 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 255 27.72 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.192 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Gene3D G3DSA:1.10.287.180 3 75 5.8E-29 T 29-03-2018 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Gene3D G3DSA:3.10.50.30 76 158 3.5E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 SUPERFAMILY SSF46557 3 78 5.62E-28 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.9E-26 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 PIRSF PIRSF006092 1 157 3.5E-42 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 52.611 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 156 4.9E-81 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 3.4E-21 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS09140 e1f04d111f8eb0e6d3e3510cd496f744 158 SUPERFAMILY SSF54534 80 155 1.57E-19 T 29-03-2018 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF07484 Phage Tail Collar Domain 839 886 6.1E-10 T 29-03-2018 IPR011083 Phage tail collar domain CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 SUPERFAMILY SSF88874 832 984 2.09E-33 T 29-03-2018 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 SUPERFAMILY SSF49464 5 98 1.45E-9 T 29-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF03406 Phage tail fibre repeat 752 791 6.8E-12 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF03406 Phage tail fibre repeat 713 752 9.3E-10 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF03406 Phage tail fibre repeat 674 713 2.5E-9 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF03406 Phage tail fibre repeat 791 824 1.8E-7 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Pfam PF08400 Prophage tail fibre N-terminal 2 134 4.5E-18 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Gene3D G3DSA:2.60.40.1120 4 107 1.9E-11 T 29-03-2018 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Gene3D G3DSA:4.10.1070.10 884 977 1.3E-20 T 29-03-2018 CPU03_RS16030 008cec650407ae5672eac4f17da467e0 985 Gene3D G3DSA:3.90.1340.10 829 883 6.1E-12 T 29-03-2018 IPR011083 Phage tail collar domain CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Gene3D G3DSA:3.30.2320.20 813 906 2.0E-25 T 29-03-2018 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.432 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 2.6E-295 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Gene3D G3DSA:1.10.730.10 589 805 2.4E-46 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 SUPERFAMILY SSF50677 204 403 1.78E-57 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 651 2.6E-220 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 2.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 537 550 2.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 2.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 572 581 2.4E-33 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Gene3D G3DSA:3.90.740.10 208 512 8.3E-94 T 29-03-2018 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 SUPERFAMILY SSF47323 663 939 2.8E-77 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Pfam PF06827 Zinc finger found in FPG and IleRS 908 936 7.7E-9 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Gene3D G3DSA:3.40.50.620 29 207 7.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 SUPERFAMILY SSF52374 3 202 5.4E-131 T 29-03-2018 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 SUPERFAMILY SSF52374 403 658 5.4E-131 T 29-03-2018 CPU03_RS04905 dd3b57a99781193ebdd71bf40fb38835 948 Pfam PF08264 Anticodon-binding domain of tRNA 696 851 2.3E-28 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CPU03_RS00185 8a8351b2179b886a18e4b159d652c83f 495 SUPERFAMILY SSF52096 66 193 5.16E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS00185 8a8351b2179b886a18e4b159d652c83f 495 SUPERFAMILY SSF52096 224 281 5.16E-30 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS00185 8a8351b2179b886a18e4b159d652c83f 495 Pfam PF01343 Peptidase family S49 147 293 1.9E-31 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CPU03_RS00185 8a8351b2179b886a18e4b159d652c83f 495 Gene3D G3DSA:3.90.226.10 70 361 9.8E-27 T 29-03-2018 CPU03_RS16900 e6c435f729b25436fc3c8dbeee9ce674 266 SUPERFAMILY SSF56349 47 236 1.82E-26 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS16900 e6c435f729b25436fc3c8dbeee9ce674 266 Pfam PF00589 Phage integrase family 45 236 5.5E-40 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS16900 e6c435f729b25436fc3c8dbeee9ce674 266 Gene3D G3DSA:1.10.443.10 44 238 2.3E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS16900 e6c435f729b25436fc3c8dbeee9ce674 266 PIRSF PIRSF004576 1 260 1.2E-97 T 29-03-2018 IPR016423 Resolvase, Rsv CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 20 130 2.7E-48 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 Gene3D G3DSA:3.30.1130.10 143 281 2.2E-46 T 29-03-2018 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 1.0E-124 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 SUPERFAMILY SSF55620 185 266 8.89E-10 T 29-03-2018 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 Gene3D G3DSA:3.30.1130.10 20 135 1.1E-38 T 29-03-2018 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 159.373 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 PIRSF PIRSF004750 5 281 3.6E-122 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CPU03_RS04235 226bda6c52fc647f0269b004e4424377 281 Pfam PF14489 QueF-like protein 195 267 5.6E-27 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 Gene3D G3DSA:1.10.10.10 140 237 5.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 Pfam PF00072 Response regulator receiver domain 6 113 8.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 SMART SM00448 4 114 4.7E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 Gene3D G3DSA:3.40.50.2300 1 139 1.0E-31 T 29-03-2018 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 SMART SM00862 156 232 3.7E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 SUPERFAMILY SSF46894 136 234 3.97E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS05015 b37242783544d7f700d67eb853d93c07 238 SUPERFAMILY SSF52172 2 124 1.17E-35 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 Gene3D G3DSA:3.20.20.70 1 220 1.3E-86 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 PIRSF PIRSF001461 1 225 1.3E-105 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 SUPERFAMILY SSF51366 3 218 2.4E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.0E-91 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS09250 d04560a9a9f8422484aa1d7c3203c661 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.6E-97 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 SUPERFAMILY SSF51338 1 53 7.66E-36 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 SUPERFAMILY SSF51338 382 454 7.66E-36 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 Gene3D G3DSA:2.30.40.10 1 60 5.4E-17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 454 3.5E-184 T 29-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 SUPERFAMILY SSF51556 54 382 2.13E-96 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 Gene3D G3DSA:3.20.20.140 61 279 4.7E-51 T 29-03-2018 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 Gene3D G3DSA:3.20.20.140 280 423 6.8E-42 T 29-03-2018 CPU03_RS09725 e727a65988b1212af922b45ce7b68c3f 461 Pfam PF01979 Amidohydrolase family 50 434 1.2E-22 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS10640 fe0d23a3aecb17eaaf7e9ebafb9ad5c5 274 SUPERFAMILY SSF51735 106 267 3.94E-31 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS10640 fe0d23a3aecb17eaaf7e9ebafb9ad5c5 274 SUPERFAMILY SSF53223 9 105 1.21E-24 T 29-03-2018 CPU03_RS10640 fe0d23a3aecb17eaaf7e9ebafb9ad5c5 274 Gene3D G3DSA:3.40.50.10860 20 116 9.7E-28 T 29-03-2018 CPU03_RS10640 fe0d23a3aecb17eaaf7e9ebafb9ad5c5 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 1.6E-16 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CPU03_RS10640 fe0d23a3aecb17eaaf7e9ebafb9ad5c5 274 Gene3D G3DSA:3.40.50.720 117 273 1.5E-23 T 29-03-2018 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 Gene3D G3DSA:3.20.20.140 66 317 1.9E-106 T 29-03-2018 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 PIRSF PIRSF001238 1 380 1.1E-142 T 29-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 379 1.8E-118 T 29-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 SUPERFAMILY SSF51338 3 57 6.56E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 SUPERFAMILY SSF51338 337 361 6.56E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 Pfam PF01979 Amidohydrolase family 53 355 1.4E-17 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 Gene3D G3DSA:2.30.40.10 318 369 1.7E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 Gene3D G3DSA:2.30.40.10 1 65 5.9E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS01690 3a5200e336ae9fad7fc68b7aea305f72 382 SUPERFAMILY SSF51556 57 335 1.92E-69 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS08610 64f48155419527600136a4483f822629 196 Gene3D G3DSA:1.10.10.10 125 196 1.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08610 64f48155419527600136a4483f822629 196 SMART SM00448 3 113 3.5E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08610 64f48155419527600136a4483f822629 196 SMART SM00421 136 193 4.5E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 Pfam PF00072 Response regulator receiver domain 6 113 7.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08610 64f48155419527600136a4483f822629 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 191 1.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 SUPERFAMILY SSF52172 2 129 9.96E-25 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS08610 64f48155419527600136a4483f822629 196 SUPERFAMILY SSF46894 122 194 1.84E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 Gene3D G3DSA:3.40.50.2300 2 124 7.9E-27 T 29-03-2018 CPU03_RS08610 64f48155419527600136a4483f822629 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 9.9E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 9.9E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08610 64f48155419527600136a4483f822629 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 9.9E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 SUPERFAMILY SSF57716 217 268 2.08E-17 T 29-03-2018 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Gene3D G3DSA:1.10.8.50 131 269 7.6E-52 T 29-03-2018 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Gene3D G3DSA:3.20.190.10 1 130 8.4E-38 T 29-03-2018 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 SMART SM01232 129 221 5.5E-48 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.542 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.2E-33 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 2.0E-10 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 SMART SM00898 2 115 8.4E-54 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 SUPERFAMILY SSF81624 2 138 1.44E-42 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 SUPERFAMILY SSF46946 130 222 3.27E-30 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.2E-101 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CPU03_RS07650 29532938a20322e2c2d9c49f73e3c98e 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 7.5E-28 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CPU03_RS15015 0ab682235ae3acc9d22cbe289e0774b9 288 PIRSF PIRSF033887 1 277 6.1E-70 T 29-03-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CPU03_RS15015 0ab682235ae3acc9d22cbe289e0774b9 288 SUPERFAMILY SSF54211 3 137 1.29E-19 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS15015 0ab682235ae3acc9d22cbe289e0774b9 288 Gene3D G3DSA:3.30.230.10 22 148 2.7E-15 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS15015 0ab682235ae3acc9d22cbe289e0774b9 288 Pfam PF00288 GHMP kinases N terminal domain 72 116 9.3E-9 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CPU03_RS15015 0ab682235ae3acc9d22cbe289e0774b9 288 Gene3D G3DSA:3.30.70.890 149 275 1.2E-4 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS01465 e18c4b73ff73e9f547dc1278aa57096f 453 PIRSF PIRSF006060 2 450 7.8E-71 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS01465 e18c4b73ff73e9f547dc1278aa57096f 453 Pfam PF00324 Amino acid permease 19 450 1.3E-116 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CPU03_RS01465 e18c4b73ff73e9f547dc1278aa57096f 453 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:3.40.50.970 804 1185 1.3E-104 T 29-03-2018 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:3.40.920.10 424 633 1.2E-50 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SUPERFAMILY SSF52518 804 1185 2.02E-124 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:4.10.780.10 641 675 3.0E-10 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 350 1.2E-11 T 29-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SUPERFAMILY SSF52518 6 260 1.5E-74 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:3.40.50.970 4 260 8.5E-51 T 29-03-2018 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 247 1.6E-78 T 29-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF10371 Domain of unknown function 637 685 4.5E-18 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:3.30.70.20 676 801 1.0E-29 T 29-03-2018 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SUPERFAMILY SSF52922 261 419 5.97E-35 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SMART SM00890 629 686 4.4E-19 T 29-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SUPERFAMILY SSF54862 672 849 3.35E-23 T 29-03-2018 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 9 1182 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 PIRSF PIRSF000159 2 1191 0.0 T 29-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 SUPERFAMILY SSF53323 425 675 2.88E-73 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 752 763 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 433 615 1.1E-22 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Gene3D G3DSA:3.40.50.920 261 423 1.0E-34 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 971 1083 9.5E-12 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS12925 e7693370cda1cc8848594dee4e08bbe8 1193 Pfam PF13484 4Fe-4S double cluster binding domain 696 764 8.9E-11 T 29-03-2018 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 Gene3D G3DSA:1.10.10.10 1 56 9.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14700 64063702a7ee02d356740561e3954967 255 Pfam PF00455 DeoR C terminal sensor domain 74 228 2.8E-45 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS14700 64063702a7ee02d356740561e3954967 255 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 3.9E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 SUPERFAMILY SSF100950 71 230 2.05E-31 T 29-03-2018 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 SMART SM00420 4 56 6.2E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 SUPERFAMILY SSF46785 2 62 1.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14700 64063702a7ee02d356740561e3954967 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.5E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 SMART SM01134 70 230 4.8E-59 T 29-03-2018 CPU03_RS14700 64063702a7ee02d356740561e3954967 255 Gene3D G3DSA:3.40.50.1360 62 232 7.7E-36 T 29-03-2018 CPU03_RS00310 9129631e68addba784233acb9a802e35 223 Pfam PF00717 Peptidase S24-like 131 201 8.2E-13 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS00310 9129631e68addba784233acb9a802e35 223 SUPERFAMILY SSF51306 124 218 2.09E-25 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS00310 9129631e68addba784233acb9a802e35 223 Gene3D G3DSA:2.10.109.10 84 216 1.4E-19 T 29-03-2018 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.313 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 Pfam PF00557 Metallopeptidase family M24 12 242 6.9E-55 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 Gene3D G3DSA:3.90.230.10 1 266 6.3E-89 T 29-03-2018 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 3.6E-108 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 SUPERFAMILY SSF55920 4 253 5.89E-92 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.0E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.0E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.0E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS04195 b75f9b394b744f37a2194d72ea8d7c31 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.0E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Pfam PF00873 AcrB/AcrD/AcrF family 5 1008 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1022 25.431 T 29-03-2018 IPR023931 Multidrug resistance protein MdtC CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82866 290 491 3.53E-46 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:1.20.1640.10 268 492 8.0E-44 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:1.20.1640.10 809 1011 4.6E-34 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82866 812 1009 2.62E-41 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 136 182 1.15E-18 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 268 324 1.15E-18 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 40 135 9.16E-23 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.8E-85 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:3.30.70.1430 557 652 3.5E-13 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82714 703 785 1.31E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:3.30.2090.10 701 788 3.2E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 555 650 7.59E-17 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:3.30.2090.10 181 267 4.8E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 Gene3D G3DSA:3.30.70.1430 40 142 2.3E-24 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 788 832 1.26E-5 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82693 653 701 1.26E-5 T 29-03-2018 CPU03_RS03020 79bd79159b00360b9f18af0cde19d1df 1026 SUPERFAMILY SSF82714 183 266 2.49E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03640 1ae93941623e2d7e8feb5a02aa2b194c 262 SUPERFAMILY SSF161098 3 247 1.7E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS03640 1ae93941623e2d7e8feb5a02aa2b194c 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 245 1.3E-9 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS03640 1ae93941623e2d7e8feb5a02aa2b194c 262 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 24 245 1.1E-69 T 29-03-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0006810|GO:0016020 CPU03_RS03640 1ae93941623e2d7e8feb5a02aa2b194c 262 Gene3D G3DSA:1.10.3720.10 1 260 5.3E-35 T 29-03-2018 CPU03_RS00410 ea2bd2c85f5554ad3663acbaaf92f9cf 167 SUPERFAMILY SSF52833 4 164 7.29E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS00410 ea2bd2c85f5554ad3663acbaaf92f9cf 167 Pfam PF08534 Redoxin 20 163 1.9E-24 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CPU03_RS00410 ea2bd2c85f5554ad3663acbaaf92f9cf 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 29-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CPU03_RS00410 ea2bd2c85f5554ad3663acbaaf92f9cf 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 37.692 T 29-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CPU03_RS00410 ea2bd2c85f5554ad3663acbaaf92f9cf 167 Gene3D G3DSA:3.40.30.10 15 167 1.1E-21 T 29-03-2018 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Gene3D G3DSA:3.30.300.30 518 649 7.7E-28 T 29-03-2018 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 5.1E-20 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 2.9E-303 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.5E-26 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Pfam PF00501 AMP-binding enzyme 83 522 5.6E-89 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Gene3D G3DSA:2.30.38.10 432 515 4.6E-10 T 29-03-2018 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.886 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Gene3D G3DSA:3.40.50.980 267 431 8.6E-35 T 29-03-2018 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 Gene3D G3DSA:3.40.50.980 74 266 1.1E-53 T 29-03-2018 CPU03_RS06985 269a35c6b3d8e8f9facf58162ed7d3e8 651 SUPERFAMILY SSF56801 8 643 6.41E-185 T 29-03-2018 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 222 1.8E-57 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 Gene3D G3DSA:3.40.50.1860 119 215 1.7E-22 T 29-03-2018 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 88 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 SUPERFAMILY SSF53681 5 116 8.99E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 TIGRFAM TIGR00035 asp_race: aspartate racemase 4 203 1.8E-50 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 SUPERFAMILY SSF53681 104 202 2.29E-21 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS03655 51c897d01751fd0da5a44b9a5e9560fb 239 Gene3D G3DSA:3.40.50.1860 1 118 2.1E-40 T 29-03-2018 CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 Gene3D G3DSA:1.10.101.10 193 276 3.4E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 Gene3D G3DSA:3.40.80.10 42 192 1.9E-42 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 SUPERFAMILY SSF55846 26 194 1.44E-51 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 SUPERFAMILY SSF47090 199 275 2.39E-18 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 SMART SM00644 33 178 9.0E-31 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 1.0E-27 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS14000 3f6d9bf7e1988a3f2d760ebf2185bcca 282 Pfam PF01471 Putative peptidoglycan binding domain 213 264 3.9E-6 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 Gene3D G3DSA:3.40.190.10 80 167 5.0E-15 T 29-03-2018 CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 4.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 Pfam PF03466 LysR substrate binding domain 80 282 6.2E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 SUPERFAMILY SSF46785 1 104 1.62E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 SUPERFAMILY SSF53850 80 283 1.01E-35 T 29-03-2018 CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 Gene3D G3DSA:1.10.10.10 1 78 5.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03810 24d90996b248ebe839639ca20ad91ddb 285 Gene3D G3DSA:3.40.190.10 168 253 1.5E-15 T 29-03-2018 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Gene3D G3DSA:3.40.50.2300 673 803 2.9E-22 T 29-03-2018 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 5 903 4.5E-274 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SUPERFAMILY SSF55874 498 667 4.06E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Gene3D G3DSA:1.10.287.130 434 504 3.3E-17 T 29-03-2018 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 662 1.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 622 1.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 643 1.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 608 1.0E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 664 1.5E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Pfam PF01627 Hpt domain 843 920 1.3E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SMART SM00388 444 509 1.9E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SMART SM00304 355 411 4.3E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 PIRSF PIRSF036437 1 927 0.0 T 29-03-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SMART SM00387 558 665 2.7E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SMART SM00448 683 795 2.9E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SUPERFAMILY SSF52172 681 800 2.7E-22 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Gene3D G3DSA:1.20.120.160 812 928 1.1E-10 T 29-03-2018 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Gene3D G3DSA:3.30.565.10 515 672 5.6E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SUPERFAMILY SSF47226 820 908 2.36E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 444 509 1.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 Pfam PF00072 Response regulator receiver domain 685 793 2.3E-12 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06485 c9d15561c0fc4625bdf656ff88092e71 932 SUPERFAMILY SSF47384 427 509 1.02E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS04270 6458932bd5560d6353937d9856a2eb1c 151 Gene3D G3DSA:3.90.1010.10 1 143 4.8E-42 T 29-03-2018 CPU03_RS04270 6458932bd5560d6353937d9856a2eb1c 151 SUPERFAMILY SSF82649 4 143 4.66E-41 T 29-03-2018 CPU03_RS04270 6458932bd5560d6353937d9856a2eb1c 151 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 140 1.6E-66 T 29-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CPU03_RS04270 6458932bd5560d6353937d9856a2eb1c 151 Pfam PF02657 Fe-S metabolism associated domain 18 137 1.1E-36 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 PRINTS PR00446 Hydrogen uptake protein signature 68 84 9.5E-14 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 PRINTS PR00446 Hydrogen uptake protein signature 4 16 9.5E-14 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 PRINTS PR00446 Hydrogen uptake protein signature 34 51 9.5E-14 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 PRINTS PR00446 Hydrogen uptake protein signature 16 27 9.5E-14 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 PRINTS PR00446 Hydrogen uptake protein signature 57 67 9.5E-14 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 Gene3D G3DSA:3.40.50.1450 2 157 5.4E-35 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 SUPERFAMILY SSF53163 4 151 3.53E-35 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 5 148 3.2E-53 T 29-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 142 2.7E-36 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10845 820c63cc0ade4d89d64a887a33a3dea1 161 Pfam PF01750 Hydrogenase maturation protease 33 140 5.6E-24 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00052 729 975 4.2E-8 T 29-03-2018 IPR001633 EAL domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00267 546 718 1.3E-57 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SUPERFAMILY SSF55073 562 719 2.43E-45 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Pfam PF05231 MASE1 21 245 5.4E-16 T 29-03-2018 IPR007895 MASE1 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 555 717 4.2E-39 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Pfam PF00989 PAS fold 430 543 6.4E-13 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Pfam PF00989 PAS fold 296 406 9.8E-12 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SUPERFAMILY SSF141868 774 975 1.05E-24 T 29-03-2018 IPR001633 EAL domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SUPERFAMILY SSF55785 284 401 2.74E-21 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00091 295 361 3.7E-12 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00091 429 497 1.9E-8 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 426 549 1.1E-11 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 415 1.2E-23 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SUPERFAMILY SSF55785 417 544 1.77E-15 T 29-03-2018 IPR000014 PAS domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Pfam PF00990 Diguanylate cyclase, GGDEF domain 557 713 1.7E-43 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00086 368 410 5.1E-4 T 29-03-2018 IPR001610 PAC motif CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 SMART SM00086 504 546 5.6 T 29-03-2018 IPR001610 PAC motif CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Gene3D G3DSA:3.20.20.450 733 962 3.4E-31 T 29-03-2018 IPR001633 EAL domain CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Gene3D G3DSA:3.30.450.20 419 549 3.8E-20 T 29-03-2018 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Gene3D G3DSA:3.30.450.20 272 418 3.5E-26 T 29-03-2018 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Gene3D G3DSA:3.30.70.270 550 726 2.0E-54 T 29-03-2018 CPU03_RS03540 ea599a8d373b79987658aa69f6277e0f 1002 Pfam PF00563 EAL domain 785 968 3.7E-26 T 29-03-2018 IPR001633 EAL domain CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 SUPERFAMILY SSF51182 33 106 1.04E-5 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 5.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 5.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 SMART SM00342 212 295 8.5E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 Gene3D G3DSA:2.60.120.10 28 254 1.4E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 SUPERFAMILY SSF46689 198 246 3.4E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 Pfam PF12833 Helix-turn-helix domain 219 296 8.9E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 SUPERFAMILY SSF46689 248 296 3.18E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS15555 c2e8af4c60a4644558be405a1c543336 309 Gene3D G3DSA:1.10.10.60 255 304 7.4E-14 T 29-03-2018 CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 Gene3D G3DSA:3.40.30.10 84 166 1.3E-12 T 29-03-2018 CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 SUPERFAMILY SSF52833 15 165 2.8E-51 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 PIRSF PIRSF000216 2 166 2.9E-54 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 166 4.4E-52 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13320 3db56a4b096df4bc7497785520d94b62 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 1.5E-51 T 29-03-2018 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Pfam PF01627 Hpt domain 820 903 6.3E-13 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 171 2.1E-55 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Gene3D G3DSA:3.40.50.2300 657 800 5.7E-37 T 29-03-2018 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SMART SM00448 663 776 1.7E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Gene3D G3DSA:1.20.120.160 801 913 1.1E-17 T 29-03-2018 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SMART SM00073 811 909 1.1E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF158472 194 243 1.7E-5 T 29-03-2018 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SMART SM00304 194 246 5.1E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SMART SM00387 398 514 4.4E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 351 1.9E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 511 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Pfam PF00072 Response regulator receiver domain 665 776 2.1E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF55874 340 512 7.73E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF52172 662 781 4.84E-36 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 513 4.9E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF47384 271 352 5.69E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Gene3D G3DSA:3.30.565.10 355 520 1.2E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF47226 759 772 8.64E-21 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SUPERFAMILY SSF47226 800 904 8.64E-21 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 SMART SM00388 286 351 5.7E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS11785 1c632848359b05fafd76d4dbe8880f95 934 Gene3D G3DSA:1.10.287.130 276 347 1.2E-19 T 29-03-2018 CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Gene3D G3DSA:1.10.10.10 1 119 1.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 356 7.6E-13 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Gene3D G3DSA:3.40.190.10 265 373 2.9E-6 T 29-03-2018 CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 7.4E-36 T 29-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 SUPERFAMILY SSF53850 122 559 1.77E-53 T 29-03-2018 CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Gene3D G3DSA:3.10.105.10 389 530 2.9E-4 T 29-03-2018 CPU03_RS03310 0199d9528388166ee969c876ceebc105 570 Gene3D G3DSA:3.90.76.10 130 264 2.4E-15 T 29-03-2018 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 SUPERFAMILY SSF46785 3 70 9.97E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 5.5E-55 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 Gene3D G3DSA:1.10.10.10 1 69 5.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.7E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.7E-13 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 SUPERFAMILY SSF100950 75 233 4.54E-30 T 29-03-2018 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.0E-25 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 SMART SM00420 6 58 1.1E-28 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 SMART SM01134 72 233 1.1E-73 T 29-03-2018 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS09020 9a57971407eff36fe935ca019fc3b2bd 252 Gene3D G3DSA:3.40.50.1360 70 234 2.6E-39 T 29-03-2018 CPU03_RS11385 bb30f3cb5fb19cf5751804c67667d10a 73 Pfam PF07191 zinc-ribbons 4 69 2.3E-28 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CPU03_RS11385 bb30f3cb5fb19cf5751804c67667d10a 73 Gene3D G3DSA:2.20.25.10 4 31 6.7E-4 T 29-03-2018 CPU03_RS11385 bb30f3cb5fb19cf5751804c67667d10a 73 Gene3D G3DSA:2.20.25.10 33 70 0.27 T 29-03-2018 CPU03_RS11385 bb30f3cb5fb19cf5751804c67667d10a 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 68 1.0E-17 T 29-03-2018 IPR010807 Protein of unknown function DUF1407 CPU03_RS11385 bb30f3cb5fb19cf5751804c67667d10a 73 SUPERFAMILY SSF161187 1 70 5.36E-28 T 29-03-2018 IPR029037 YfgJ-like CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 SUPERFAMILY SSF101904 533 850 2.49E-114 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Gene3D G3DSA:1.10.268.10 376 497 3.4E-49 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.655 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.0E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 1.3E-10 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 2.7E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 2.7E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 1.1E-16 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 2.3E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Gene3D G3DSA:2.120.10.90 533 856 6.7E-136 T 29-03-2018 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Gene3D G3DSA:3.90.199.10 34 284 7.3E-117 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 SMART SM00434 11 499 1.2E-299 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.2E-152 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 29-03-2018 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 Gene3D G3DSA:3.90.199.10 285 375 1.6E-9 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS13530 bc25129ab6feafc8a0e41ca2de748647 877 SUPERFAMILY SSF56719 30 521 6.8E-183 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.0E-137 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 SUPERFAMILY SSF54368 3 100 4.45E-37 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.3E-32 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 SMART SM01230 102 379 1.4E-147 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 SUPERFAMILY SSF55931 102 468 1.77E-137 T 29-03-2018 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.1E-215 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 Gene3D G3DSA:3.30.590.10 105 457 6.7E-122 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CPU03_RS07875 491f9e9f577c5ce286a9f8b8cc36c469 469 Gene3D G3DSA:3.10.20.70 2 104 3.2E-29 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 Pfam PF13286 Phosphohydrolase-associated domain 477 502 2.1E-5 T 29-03-2018 IPR026875 Phosphohydrolase-associated domain CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 SUPERFAMILY SSF109604 253 434 4.35E-57 T 29-03-2018 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 SUPERFAMILY SSF109604 184 217 4.35E-57 T 29-03-2018 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 SUPERFAMILY SSF109604 486 504 4.35E-57 T 29-03-2018 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 SUPERFAMILY SSF109604 32 136 4.35E-57 T 29-03-2018 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 32 505 6.5E-115 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 507 49.082 T 29-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 Gene3D G3DSA:1.10.3210.10 20 507 1.8E-73 T 29-03-2018 CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 SMART SM00471 64 284 2.6E-8 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS11515 49244f2eebf5ec579096640e6419c42a 507 Pfam PF01966 HD domain 68 138 9.9E-10 T 29-03-2018 IPR006674 HD domain CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.9E-29 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.1E-77 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 SUPERFAMILY SSF51621 1 74 2.23E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 SUPERFAMILY SSF51621 156 339 2.23E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.8E-189 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Gene3D G3DSA:2.40.33.10 110 159 7.3E-24 T 29-03-2018 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Gene3D G3DSA:3.20.20.60 1 109 5.7E-19 T 29-03-2018 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.2E-152 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Gene3D G3DSA:3.20.20.60 160 321 8.0E-66 T 29-03-2018 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 SUPERFAMILY SSF50800 70 167 1.92E-29 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 SUPERFAMILY SSF52935 323 469 1.57E-35 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS00390 114eae3ab7248ecf7d6b71f71ac6483c 470 Gene3D G3DSA:3.40.1380.20 322 470 1.4E-44 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS13025 66e8c1baea3dc459e88906ffd1c52b25 161 Pfam PF03100 CcmE 4 137 7.4E-46 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CPU03_RS13025 66e8c1baea3dc459e88906ffd1c52b25 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.379 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CPU03_RS13025 66e8c1baea3dc459e88906ffd1c52b25 161 Gene3D G3DSA:2.40.50.140 27 131 6.8E-33 T 29-03-2018 CPU03_RS13025 66e8c1baea3dc459e88906ffd1c52b25 161 SUPERFAMILY SSF82093 30 143 4.32E-41 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 SUPERFAMILY SSF50692 600 748 1.33E-30 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 467 484 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:3.30.2070.10 482 530 8.9E-18 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Pfam PF01568 Molydopterin dinucleotide binding domain 638 747 1.3E-22 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Pfam PF00384 Molybdopterin oxidoreductase 98 524 2.9E-87 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 1.3E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:3.40.50.740 379 480 2.7E-7 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 SMART SM00926 41 95 6.1E-7 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:2.40.40.20 624 759 9.4E-30 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:3.40.50.740 100 196 2.1E-13 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:3.40.228.10 197 378 1.1E-45 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 64 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 SUPERFAMILY SSF53706 44 620 2.36E-134 T 29-03-2018 CPU03_RS00065 54fa7d4be0e32fd48f9ee67512973304 759 Gene3D G3DSA:2.20.25.90 36 99 1.5E-10 T 29-03-2018 CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 7.5E-17 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 SUPERFAMILY SSF52833 1 100 9.61E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 Gene3D G3DSA:1.20.1050.10 94 203 4.1E-20 T 29-03-2018 CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 173 2.7E-6 T 29-03-2018 CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 SUPERFAMILY SSF47616 69 201 1.24E-22 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CPU03_RS09980 3098f8e6105cf0ffa757ddbd4acd2f02 203 Gene3D G3DSA:3.40.30.10 1 93 5.2E-19 T 29-03-2018 CPU03_RS12695 00bc64e045c0af0278db5eff1726818d 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 1.3E-73 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CPU03_RS12695 00bc64e045c0af0278db5eff1726818d 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 6.7E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS12695 00bc64e045c0af0278db5eff1726818d 230 Gene3D G3DSA:1.10.3720.10 1 229 9.7E-38 T 29-03-2018 CPU03_RS12695 00bc64e045c0af0278db5eff1726818d 230 SUPERFAMILY SSF161098 2 220 1.96E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF48452 593 755 6.64E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:1.25.40.10 27 225 1.7E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Pfam PF13432 Tetratricopeptide repeat 314 354 0.018 T 29-03-2018 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Pfam PF13432 Tetratricopeptide repeat 374 435 3.6E-8 T 29-03-2018 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:2.40.160.20 954 1153 1.6E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:1.25.40.10 340 456 3.1E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:1.25.40.10 236 339 2.7E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:1.25.40.10 457 602 1.2E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Gene3D G3DSA:1.25.40.10 603 953 7.2E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF48452 627 679 3.11E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF48452 485 563 3.11E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF48452 36 211 1.04E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SMART SM00028 369 402 20.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SMART SM00028 479 512 150.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SMART SM00028 321 354 0.0034 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SMART SM00028 621 654 250.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SMART SM00028 403 436 3.5E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF48452 318 451 3.57E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 820 1149 8.3E-119 T 29-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 SUPERFAMILY SSF103515 909 1147 7.19E-6 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS08705 71b0cca1b72402f10d04307685c98bf4 1169 Pfam PF14559 Tetratricopeptide repeat 631 679 5.1E-8 T 29-03-2018 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.7E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.7E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.7E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.7E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.7E-29 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 4.3E-62 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.2E-50 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 SUPERFAMILY SSF47928 3 104 3.27E-27 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 Gene3D G3DSA:1.10.520.20 2 106 2.0E-27 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.484 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08085 8ecf0bfead91112a15eacee25c7763bf 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 29-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 SMART SM00062 26 246 2.5E-70 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 6.7E-71 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 Gene3D G3DSA:3.40.190.10 148 248 1.2E-18 T 29-03-2018 CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 SUPERFAMILY SSF53850 1 245 2.17E-75 T 29-03-2018 CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 Gene3D G3DSA:3.40.190.10 13 147 1.7E-38 T 29-03-2018 CPU03_RS13685 d3d526aaf355df82fa6c186369d90496 248 SMART SM00079 26 245 9.2E-8 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.8E-66 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.736 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 Gene3D G3DSA:3.30.420.10 2 159 1.9E-50 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 1.0E-82 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.1E-43 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.1E-43 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.1E-43 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.1E-43 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.1E-43 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CPU03_RS01430 d775505da265ced89e680e0b5139cf08 173 SUPERFAMILY SSF53098 3 156 1.33E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11080 4f95291739f333110e3a05cbb39f6b71 519 Pfam PF04262 Glutamate-cysteine ligase 10 379 4.0E-171 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CPU03_RS11080 4f95291739f333110e3a05cbb39f6b71 519 SUPERFAMILY SSF55931 4 513 2.88E-199 T 29-03-2018 CPU03_RS11080 4f95291739f333110e3a05cbb39f6b71 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 515 4.5E-240 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CPU03_RS11080 4f95291739f333110e3a05cbb39f6b71 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 221.661 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 SUPERFAMILY SSF55021 384 476 1.65E-22 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 SUPERFAMILY SSF55347 614 797 1.31E-51 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Pfam PF13840 ACT domain 314 376 2.3E-9 T 29-03-2018 IPR027795 GATS-like ACT domain CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Pfam PF13840 ACT domain 393 454 3.8E-9 T 29-03-2018 IPR027795 GATS-like ACT domain CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Gene3D G3DSA:3.40.1160.10 1 289 7.0E-59 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.9E-143 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 SUPERFAMILY SSF55021 304 381 9.93E-24 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.5E-49 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 PIRSF PIRSF000727 1 817 0.0 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 SUPERFAMILY SSF51735 464 636 1.01E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Gene3D G3DSA:3.40.50.720 465 635 3.1E-29 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Gene3D G3DSA:3.30.70.260 290 384 1.8E-27 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Gene3D G3DSA:3.30.70.260 385 464 7.1E-19 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Pfam PF00696 Amino acid kinase family 2 284 7.1E-44 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Gene3D G3DSA:3.30.360.10 636 793 5.0E-55 T 29-03-2018 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.1E-27 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CPU03_RS04995 c100c3ee1e833efb486c48226935bc98 819 SUPERFAMILY SSF53633 1 296 4.56E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS10235 a1483026766eaebe146990612ab7804e 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 3.9E-36 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS10235 a1483026766eaebe146990612ab7804e 147 SUPERFAMILY SSF55804 1 145 5.1E-41 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS10235 a1483026766eaebe146990612ab7804e 147 Gene3D G3DSA:3.40.930.10 1 147 2.6E-36 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 275 46.795 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 Gene3D G3DSA:1.20.1540.10 93 272 2.5E-34 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 Pfam PF01694 Rhomboid family 132 272 1.3E-27 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 1.9E-120 T 29-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 83 2.3E-30 T 29-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CPU03_RS09015 d40101e92af722ada756bdde5b04b4b9 276 SUPERFAMILY SSF144091 95 271 1.96E-41 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 Gene3D G3DSA:1.10.287.470 130 189 1.5E-7 T 29-03-2018 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 Gene3D G3DSA:2.40.50.100 61 129 9.7E-13 T 29-03-2018 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 Gene3D G3DSA:2.40.50.100 211 385 1.1E-7 T 29-03-2018 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 346 4.5E-14 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 21 346 2.7E-133 T 29-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 290 9.3E-14 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 SUPERFAMILY SSF111369 61 114 8.11E-7 T 29-03-2018 CPU03_RS11545 c956538545a08a29be52d575f1a7839b 391 SUPERFAMILY SSF111369 195 271 6.54E-9 T 29-03-2018 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.4E-45 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 PRINTS PR00207 Flagellin signature 76 95 2.3E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 PRINTS PR00207 Flagellin signature 111 134 2.3E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 PRINTS PR00207 Flagellin signature 37 54 2.3E-29 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 Pfam PF00700 Bacterial flagellin C-terminal helical region 338 422 5.1E-29 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 Gene3D G3DSA:1.20.1330.10 40 395 5.4E-71 T 29-03-2018 CPU03_RS14460 fa906675464de552702a75a57bc4a008 423 SUPERFAMILY SSF64518 1 423 1.83E-107 T 29-03-2018 CPU03_RS16350 9ae3b4bd42e01757a3650f2dc0ef4616 193 PIRSF PIRSF006102 1 193 2.1E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CPU03_RS16350 9ae3b4bd42e01757a3650f2dc0ef4616 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.382 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CPU03_RS16350 9ae3b4bd42e01757a3650f2dc0ef4616 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 5.4E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CPU03_RS16350 9ae3b4bd42e01757a3650f2dc0ef4616 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.6E-90 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 SUPERFAMILY SSF52009 293 412 1.26E-25 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 SUPERFAMILY SSF51621 423 715 2.17E-95 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 SUPERFAMILY SSF55781 2 159 3.49E-31 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Pfam PF01590 GAF domain 18 151 4.8E-16 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 321 391 6.5E-15 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Gene3D G3DSA:3.20.20.60 421 739 1.5E-86 T 29-03-2018 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Gene3D G3DSA:3.30.450.40 1 162 3.6E-31 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 174 730 1.1E-132 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Gene3D G3DSA:1.10.274.10 196 303 3.2E-31 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 6.6E-101 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 SMART SM00065 17 164 2.4E-27 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 SUPERFAMILY SSF47831 198 309 1.7E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 5.2E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 Gene3D G3DSA:3.50.30.10 304 420 2.6E-18 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 1.7E-24 T 29-03-2018 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 1.7E-24 T 29-03-2018 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 1.7E-24 T 29-03-2018 CPU03_RS10930 dc492ab29103a355e9ec0356578c0ff4 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.7E-24 T 29-03-2018 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Gene3D G3DSA:3.40.50.300 1 166 7.6E-40 T 29-03-2018 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 SMART SM00382 37 178 2.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Gene3D G3DSA:1.20.272.10 243 363 1.0E-14 T 29-03-2018 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 SUPERFAMILY SSF48019 243 366 1.19E-35 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 362 6.3E-32 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 SUPERFAMILY SSF52540 35 222 1.48E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 437 511 7.3E-18 T 29-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 513 654 5.5E-55 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Gene3D G3DSA:1.10.8.60 167 242 6.9E-21 T 29-03-2018 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.6E-41 T 29-03-2018 CPU03_RS03205 f433dcda3c7b74dc62b4d32507df0c1e 657 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 6.3E-135 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CPU03_RS10140 787ef851c2b09727fe3b2ad4e97bb025 89 SMART SM00530 29 84 1.7E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS10140 787ef851c2b09727fe3b2ad4e97bb025 89 Pfam PF01381 Helix-turn-helix 30 83 4.4E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS10140 787ef851c2b09727fe3b2ad4e97bb025 89 SUPERFAMILY SSF47413 23 86 5.35E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS10140 787ef851c2b09727fe3b2ad4e97bb025 89 Gene3D G3DSA:1.10.260.40 13 88 1.4E-13 T 29-03-2018 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 SUPERFAMILY SSF54665 2 152 4.58E-40 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Gene3D G3DSA:3.30.365.10 606 759 7.3E-43 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Gene3D G3DSA:3.30.365.10 444 605 3.1E-36 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Gene3D G3DSA:3.30.365.10 162 269 7.1E-29 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 133 1.2E-28 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 153 696 2.8E-161 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Gene3D G3DSA:3.30.365.10 270 427 4.4E-41 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 SMART SM01008 17 133 3.3E-41 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 Gene3D G3DSA:3.90.1170.50 2 133 2.4E-37 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CPU03_RS04870 c74c66b446a4fa72745f0ef032315dda 763 SUPERFAMILY SSF56003 125 753 3.93E-176 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 Gene3D G3DSA:3.40.190.10 143 244 1.0E-19 T 29-03-2018 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 SMART SM00079 22 243 0.0078 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 Gene3D G3DSA:3.40.190.10 13 142 4.3E-37 T 29-03-2018 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 4.6E-70 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 SMART SM00062 22 244 2.5E-84 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 1.6E-87 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CPU03_RS13950 9db01e6994933892424e25942b9ccff2 244 SUPERFAMILY SSF53850 1 242 8.26E-72 T 29-03-2018 CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 205 23.731 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 PIRSF PIRSF006755 1 220 8.1E-64 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 Gene3D G3DSA:3.40.50.300 2 214 1.3E-43 T 29-03-2018 CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 7.3E-41 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 SUPERFAMILY SSF52540 1 204 1.81E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16415 6591081416b6aac1bcc11f56d531733c 221 Pfam PF13500 AAA domain 4 203 1.0E-26 T 29-03-2018 CPU03_RS06730 bdb501dd4f534d1bcee5c3fb85635a6f 226 Pfam PF02665 Nitrate reductase gamma subunit 6 223 7.1E-75 T 29-03-2018 IPR023234 NarG-like domain CPU03_RS06730 bdb501dd4f534d1bcee5c3fb85635a6f 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 224 6.6E-73 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CPU03_RS06730 bdb501dd4f534d1bcee5c3fb85635a6f 226 Gene3D G3DSA:1.20.950.20 1 217 3.5E-38 T 29-03-2018 CPU03_RS06730 bdb501dd4f534d1bcee5c3fb85635a6f 226 SUPERFAMILY SSF103501 1 224 2.35E-60 T 29-03-2018 IPR023234 NarG-like domain CPU03_RS14690 5f25c4efde5143773eede36d94e10e1d 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-32 T 29-03-2018 IPR025730 Biofilm regulator BssS CPU03_RS14690 5f25c4efde5143773eede36d94e10e1d 84 Pfam PF13991 BssS protein family 11 80 2.9E-38 T 29-03-2018 IPR025730 Biofilm regulator BssS CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Pfam PF00271 Helicase conserved C-terminal domain 233 334 8.3E-20 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SMART SM00487 26 222 7.3E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SMART SM00956 415 518 8.2E-50 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Gene3D G3DSA:1.10.10.10 407 530 2.3E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Gene3D G3DSA:3.40.50.300 9 212 1.0E-39 T 29-03-2018 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SMART SM00490 254 335 1.5E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Gene3D G3DSA:1.10.150.80 531 613 1.6E-26 T 29-03-2018 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SUPERFAMILY SSF47819 535 609 4.36E-25 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SUPERFAMILY SSF52540 19 204 2.6E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 18 607 4.3E-264 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 20 467 2.0E-199 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Pfam PF09382 RQC domain 410 517 1.3E-33 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SMART SM00341 534 613 3.5E-26 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Pfam PF00570 HRDC domain 538 604 1.5E-23 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Pfam PF16124 RecQ zinc-binding 347 408 2.0E-15 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Pfam PF00270 DEAD/DEAH box helicase 32 190 2.7E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 SUPERFAMILY SSF52540 212 460 1.46E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07320 b7efd3fc2a3b6f224949da99acf4c458 613 Gene3D G3DSA:3.40.50.300 214 406 8.8E-51 T 29-03-2018 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 Gene3D G3DSA:3.30.465.10 324 404 1.1E-19 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 SUPERFAMILY SSF54631 177 314 2.15E-22 T 29-03-2018 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 Pfam PF03471 Transporter associated domain 329 404 1.1E-19 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 Pfam PF01595 Domain of unknown function DUF21 2 169 2.0E-50 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 SUPERFAMILY SSF56176 325 407 1.25E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 Gene3D G3DSA:3.10.580.10 170 322 8.5E-18 T 29-03-2018 CPU03_RS11090 df2116fdf122323862baefa4d84953b5 413 SMART SM01091 327 405 1.5E-26 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Gene3D G3DSA:3.40.50.280 139 212 0.0094 T 29-03-2018 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Gene3D G3DSA:3.20.20.70 299 724 4.2E-29 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Pfam PF04055 Radical SAM superfamily 375 580 2.3E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Pfam PF08497 Radical SAM N-terminal 29 374 3.6E-146 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 641 51.018 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 Pfam PF11842 Domain of unknown function (DUF3362) 589 722 6.8E-45 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 375 395 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 639 1.5E-266 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 SMART SM00729 371 621 5.5E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 SUPERFAMILY SSF102114 465 640 3.53E-10 T 29-03-2018 CPU03_RS09665 76cf37084716c71b8b10bd434db2c68e 758 SUPERFAMILY SSF102114 371 435 3.53E-10 T 29-03-2018 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 ProSitePatterns PS00818 Dps protein family signature 1. 52 68 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 SUPERFAMILY SSF47240 15 167 5.08E-45 T 29-03-2018 IPR009078 Ferritin-like superfamily CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 PIRSF PIRSF005900 13 169 1.2E-39 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 76 92 2.1E-11 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 2.1E-11 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 145 163 2.1E-11 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 Gene3D G3DSA:1.20.1260.10 16 169 3.2E-38 T 29-03-2018 IPR012347 Ferritin-related CPU03_RS16830 debad4de461c43b058a2364b9b0f503b 169 Pfam PF00210 Ferritin-like domain 33 168 5.4E-19 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CPU03_RS15445 d21dc0184cb853874239c5b846a7b652 151 Gene3D G3DSA:3.40.630.30 1 149 3.8E-28 T 29-03-2018 CPU03_RS15445 d21dc0184cb853874239c5b846a7b652 151 Pfam PF00583 Acetyltransferase (GNAT) family 32 134 3.4E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS15445 d21dc0184cb853874239c5b846a7b652 151 SUPERFAMILY SSF55729 1 144 4.05E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Gene3D G3DSA:3.40.50.720 233 366 3.3E-24 T 29-03-2018 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Gene3D G3DSA:3.30.70.1450 140 232 5.5E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 SUPERFAMILY SSF51735 232 376 1.01E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Pfam PF02080 TrkA-C domain 156 225 4.3E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Pfam PF02080 TrkA-C domain 391 451 1.2E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Gene3D G3DSA:3.30.70.1450 367 458 1.5E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Pfam PF02254 TrkA-N domain 235 350 1.5E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Pfam PF02254 TrkA-N domain 3 111 1.1E-29 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 SUPERFAMILY SSF116726 148 226 3.92E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-35 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-35 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-35 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-35 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-35 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 SUPERFAMILY SSF51735 1 152 6.06E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 Gene3D G3DSA:3.40.50.720 2 139 5.3E-26 T 29-03-2018 CPU03_RS09535 7b6bdbb5af4846d07498a685db24376d 458 SUPERFAMILY SSF116726 391 451 4.84E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 369 3.8E-22 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 SMART SM00936 280 371 9.0E-26 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 6.1E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 6.1E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 6.1E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 SUPERFAMILY SSF69189 272 367 1.55E-22 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 SUPERFAMILY SSF56601 7 280 6.95E-76 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 Gene3D G3DSA:2.60.410.10 282 371 1.1E-19 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 Gene3D G3DSA:3.40.710.10 15 281 5.0E-49 T 29-03-2018 CPU03_RS03680 892628bb96cdaa1f5eca5e6d466ef784 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 260 1.3E-84 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 4.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 4.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 4.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 4.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 Gene3D G3DSA:3.30.565.10 328 483 1.6E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 323 2.4E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 SMART SM00387 368 479 4.8E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 SMART SM00388 258 324 4.5E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 SUPERFAMILY SSF47384 241 325 4.12E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 SUPERFAMILY SSF55874 313 475 2.75E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 SMART SM00304 204 257 9.6E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 475 2.0E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 475 1.7E-150 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CPU03_RS16180 26d74926fa185acae76c9b12568ea59f 483 Gene3D G3DSA:1.10.287.130 248 320 8.2E-11 T 29-03-2018 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 PRINTS PR00171 Sugar transporter signature 380 392 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 PRINTS PR00171 Sugar transporter signature 114 133 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 PRINTS PR00171 Sugar transporter signature 357 378 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 PRINTS PR00171 Sugar transporter signature 31 41 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 PRINTS PR00171 Sugar transporter signature 267 277 3.8E-23 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 12 452 1.7E-146 T 29-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 Gene3D G3DSA:1.20.1250.20 234 466 2.0E-38 T 29-03-2018 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 Gene3D G3DSA:1.20.1250.20 1 233 1.1E-37 T 29-03-2018 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 Pfam PF00083 Sugar (and other) transporter 23 455 5.3E-136 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 SUPERFAMILY SSF103473 18 453 1.57E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CPU03_RS10495 925f962e82e954ef85aa29b6b05561ad 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 328 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 PIRSF PIRSF000171 1 575 2.0E-41 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 29-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Gene3D G3DSA:1.20.58.100 423 541 2.5E-28 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.3E-243 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Gene3D G3DSA:3.50.50.60 2 271 1.0E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 3.6E-5 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.6E-5 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 SUPERFAMILY SSF56425 227 358 5.68E-43 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Pfam PF00890 FAD binding domain 7 397 2.4E-114 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 SUPERFAMILY SSF46977 444 589 7.85E-46 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Gene3D G3DSA:4.10.80.40 543 576 4.1E-12 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.8E-10 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.8E-10 T 29-03-2018 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 7.1E-39 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 Gene3D G3DSA:3.50.50.60 272 413 7.7E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 SUPERFAMILY SSF51905 3 250 1.69E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS06370 26998f3df6d62d35e203582829805ee9 599 SUPERFAMILY SSF51905 361 420 1.69E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 5.5E-268 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Pfam PF00012 Hsp70 protein 22 600 6.7E-197 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:2.60.34.10 387 528 6.4E-48 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 44.927 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 SUPERFAMILY SSF100920 385 535 1.16E-49 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 SUPERFAMILY SSF53067 200 377 6.55E-50 T 29-03-2018 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:1.20.1270.10 529 615 1.8E-10 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:3.30.420.40 20 205 5.7E-59 T 29-03-2018 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 SUPERFAMILY SSF53067 20 196 3.56E-51 T 29-03-2018 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:3.30.420.40 297 357 6.0E-12 T 29-03-2018 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:3.30.420.40 206 251 7.3E-16 T 29-03-2018 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 SUPERFAMILY SSF100934 504 615 1.41E-34 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.1E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS11310 98e656d11d9c5a80e43dc822b9f8e17b 616 Gene3D G3DSA:3.90.640.10 252 296 4.1E-12 T 29-03-2018 CPU03_RS10630 f12ad298b6febb255566d94e8522700d 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 3.0E-73 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CPU03_RS10630 f12ad298b6febb255566d94e8522700d 216 Pfam PF03006 Haemolysin-III related 12 209 1.7E-38 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 Gene3D G3DSA:3.40.50.1970 1 159 1.9E-30 T 29-03-2018 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 PIRSF PIRSF000112 1 362 5.4E-92 T 29-03-2018 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 350 1.6E-65 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 SUPERFAMILY SSF56796 2 358 1.96E-90 T 29-03-2018 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 Gene3D G3DSA:1.20.1090.10 160 365 3.6E-42 T 29-03-2018 CPU03_RS03725 7bffb04c87cb1265f988783a472c672b 366 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:2.40.40.20 1037 1223 5.2E-39 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1222 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:3.40.50.740 108 211 7.1E-5 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 SUPERFAMILY SSF53706 9 1058 2.51E-302 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:2.20.25.90 55 98 2.5E-24 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 765 782 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:3.40.50.740 638 778 4.6E-31 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:3.40.228.10 226 637 5.0E-95 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 SUPERFAMILY SSF50692 1071 1221 1.83E-40 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 SMART SM00926 43 105 7.7E-6 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1114 1141 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Pfam PF01568 Molydopterin dinucleotide binding domain 1078 1191 8.7E-19 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Gene3D G3DSA:3.30.2070.10 783 824 2.7E-5 T 29-03-2018 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Pfam PF00384 Molybdopterin oxidoreductase 108 820 1.9E-141 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS06715 d14b748cf7f6f47fc902bb69735579a9 1223 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 7.1E-9 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CPU03_RS03710 b4fd502497637f1df4650c3d4380108a 133 Gene3D G3DSA:1.10.1630.10 34 69 0.0015 T 29-03-2018 IPR014744 Nuclear receptor coactivator, CREB-bp-like, interlocking GO:0000123|GO:0003713|GO:0004402|GO:0005634|GO:0006355|GO:0016573 Reactome: R-HSA-1234158|Reactome: R-HSA-1368082|Reactome: R-HSA-1368108|Reactome: R-HSA-1912408|Reactome: R-HSA-1989781|Reactome: R-HSA-201722|Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3134973|Reactome: R-HSA-3214847|Reactome: R-HSA-3371568|Reactome: R-HSA-381340|Reactome: R-HSA-400253|Reactome: R-HSA-5617472|Reactome: R-HSA-5621575|Reactome: R-HSA-8866907|Reactome: R-HSA-8941856|Reactome: R-HSA-918233|Reactome: R-HSA-933541|Reactome: R-HSA-983231 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 SUPERFAMILY SSF53850 30 271 1.27E-15 T 29-03-2018 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 Gene3D G3DSA:3.30.565.10 439 590 7.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 Gene3D G3DSA:3.40.190.10 125 284 3.5E-17 T 29-03-2018 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 584 1.7E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 Gene3D G3DSA:1.10.287.130 340 432 1.2E-6 T 29-03-2018 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 275 3.3E-35 T 29-03-2018 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 SUPERFAMILY SSF47384 357 432 4.71E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 SMART SM00387 478 586 1.3E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 1.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 1.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 1.7E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS16110 88e5e62c2bbbed039347c52246044823 590 SUPERFAMILY SSF55874 434 584 2.62E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 SUPERFAMILY SSF53933 43 148 3.4E-36 T 29-03-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 Pfam PF00545 ribonuclease 59 146 2.2E-24 T 29-03-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PIRSF PIRSF001013 12 149 6.2E-58 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 Gene3D G3DSA:3.10.450.30 42 149 4.8E-36 T 29-03-2018 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PRINTS PR00117 Barnase signature 46 63 5.0E-30 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PRINTS PR00117 Barnase signature 129 147 5.0E-30 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PRINTS PR00117 Barnase signature 66 83 5.0E-30 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PRINTS PR00117 Barnase signature 107 126 5.0E-30 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS10470 601ab11008a1a1a9d0af82e4692f5adf 149 PRINTS PR00117 Barnase signature 86 104 5.0E-30 T 29-03-2018 IPR001887 Barnase GO:0003723|GO:0004521 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SUPERFAMILY SSF55874 259 423 8.64E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SUPERFAMILY SSF55785 87 195 3.14E-9 T 29-03-2018 IPR000014 PAS domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Gene3D G3DSA:3.30.565.10 260 430 6.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SMART SM00387 313 425 1.3E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SMART SM00388 203 269 2.3E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Pfam PF00989 PAS fold 99 152 9.5E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 421 3.8E-130 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.0E-28 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SUPERFAMILY SSF47384 190 268 7.46E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.5E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 SMART SM00091 98 164 3.1E-4 T 29-03-2018 IPR000014 PAS domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Gene3D G3DSA:1.10.287.130 209 259 7.3E-17 T 29-03-2018 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Gene3D G3DSA:3.30.450.20 97 208 1.4E-12 T 29-03-2018 CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 9.3E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02960 97219cf49a2e42b2e3c1819020b3a522 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.9E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13920 b10241e7b1e72d7cd22e50d18fcc4bb7 240 PIRSF PIRSF005426 1 240 1.4E-81 T 29-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CPU03_RS13920 b10241e7b1e72d7cd22e50d18fcc4bb7 240 SUPERFAMILY SSF55469 1 238 1.57E-70 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS13920 b10241e7b1e72d7cd22e50d18fcc4bb7 240 Pfam PF00881 Nitroreductase family 12 159 4.0E-16 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CPU03_RS13920 b10241e7b1e72d7cd22e50d18fcc4bb7 240 Gene3D G3DSA:3.40.109.10 1 240 8.1E-56 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS16430 3b501beb1d5c76009087531e295777e2 520 Gene3D G3DSA:2.40.170.10 114 520 1.5E-88 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS16430 3b501beb1d5c76009087531e295777e2 520 Pfam PF02264 LamB porin 115 520 1.9E-76 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS16430 3b501beb1d5c76009087531e295777e2 520 Pfam PF11471 Maltoporin periplasmic N-terminal extension 17 65 8.7E-10 T 29-03-2018 IPR021570 LamB-type porin N-terminal domain CPU03_RS16430 3b501beb1d5c76009087531e295777e2 520 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 120 515 3.0E-124 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS16430 3b501beb1d5c76009087531e295777e2 520 SUPERFAMILY SSF56935 115 520 3.97E-85 T 29-03-2018 CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 6.8E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.6E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 SUPERFAMILY SSF54523 7 132 8.37E-23 T 29-03-2018 CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 Gene3D G3DSA:3.30.700.10 7 143 6.7E-22 T 29-03-2018 CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CPU03_RS04585 e25d55707846899816723fc03fe14abd 149 Pfam PF00114 Pilin (bacterial filament) 36 137 7.8E-5 T 29-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 SUPERFAMILY SSF53850 89 298 1.48E-35 T 29-03-2018 CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 Gene3D G3DSA:3.40.190.10 191 269 1.7E-13 T 29-03-2018 CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 Gene3D G3DSA:3.40.190.10 88 190 1.1E-19 T 29-03-2018 CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 Gene3D G3DSA:1.10.10.10 1 83 7.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 SUPERFAMILY SSF46785 1 111 6.82E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07525 efbd0bd6f468c2a19cdd6c36f1d7ae57 299 Pfam PF03466 LysR substrate binding domain 89 296 8.3E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS06945 61b6cbe1ddea9665784cb68290e7b8ea 247 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.5E-46 T 29-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CPU03_RS06945 61b6cbe1ddea9665784cb68290e7b8ea 247 SUPERFAMILY SSF69593 3 242 5.89E-62 T 29-03-2018 CPU03_RS06945 61b6cbe1ddea9665784cb68290e7b8ea 247 Gene3D G3DSA:3.40.1130.10 49 247 4.1E-40 T 29-03-2018 CPU03_RS06945 61b6cbe1ddea9665784cb68290e7b8ea 247 SMART SM00563 67 182 1.4E-38 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS06945 61b6cbe1ddea9665784cb68290e7b8ea 247 Pfam PF01553 Acyltransferase 64 180 2.6E-31 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS14015 d9f27e8da9e63508d141cc77aa32a2e2 350 PIRSF PIRSF017617 1 344 3.0E-126 T 29-03-2018 IPR023603 Threonine aldolase CPU03_RS14015 d9f27e8da9e63508d141cc77aa32a2e2 350 Gene3D G3DSA:3.90.1150.10 248 336 1.6E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS14015 d9f27e8da9e63508d141cc77aa32a2e2 350 Gene3D G3DSA:3.40.640.10 17 247 1.5E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS14015 d9f27e8da9e63508d141cc77aa32a2e2 350 Pfam PF01212 Beta-eliminating lyase 3 282 2.2E-92 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CPU03_RS14015 d9f27e8da9e63508d141cc77aa32a2e2 350 SUPERFAMILY SSF53383 1 336 3.71E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.594 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 Gene3D G3DSA:3.90.470.10 1 110 4.3E-43 T 29-03-2018 CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.8E-50 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 SUPERFAMILY SSF54843 1 109 2.62E-43 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09405 cdea542020e34e41c11f8f46fab08a10 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 8.1E-38 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CPU03_RS06095 88dba725442700cc876dc7a0771f8719 311 SUPERFAMILY SSF103481 43 145 1.31E-13 T 29-03-2018 CPU03_RS06095 88dba725442700cc876dc7a0771f8719 311 Pfam PF00892 EamA-like transporter family 161 293 8.8E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS06095 88dba725442700cc876dc7a0771f8719 311 Pfam PF00892 EamA-like transporter family 9 144 3.6E-25 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 2.0E-70 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 SUPERFAMILY SSF53178 3 192 1.22E-69 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 Gene3D G3DSA:3.40.50.1470 1 194 4.5E-67 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 1.6E-53 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CPU03_RS01640 7fc30f7e0147ed3b1861d330fa410977 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 35.872 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Gene3D G3DSA:3.40.50.300 133 310 3.2E-25 T 29-03-2018 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 SUPERFAMILY SSF52172 8 182 7.26E-44 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 SMART SM00448 7 118 2.4E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Gene3D G3DSA:1.10.10.60 382 441 3.5E-8 T 29-03-2018 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Gene3D G3DSA:1.10.8.60 311 381 8.9E-22 T 29-03-2018 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Pfam PF00158 Sigma-54 interaction domain 139 304 3.7E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Pfam PF00072 Response regulator receiver domain 10 118 3.7E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 Gene3D G3DSA:3.40.50.2300 1 129 8.6E-35 T 29-03-2018 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 SMART SM00382 158 301 2.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 SUPERFAMILY SSF46689 389 439 1.25E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS03995 a0be522cf837d518dcb3d1595c63cc4a 446 SUPERFAMILY SSF52540 139 382 8.55E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.503 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.0E-52 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Gene3D G3DSA:3.40.50.620 417 647 1.2E-56 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.6E-78 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Gene3D G3DSA:3.90.740.10 158 416 2.5E-62 T 29-03-2018 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 SUPERFAMILY SSF50677 226 415 9.52E-56 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 8.4E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 8.9E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 9.5E-27 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 SUPERFAMILY SSF47323 662 859 1.87E-36 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 3.1E-16 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Gene3D G3DSA:1.10.730.10 648 796 2.3E-30 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 SUPERFAMILY SSF52374 416 668 3.38E-141 T 29-03-2018 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 SUPERFAMILY SSF52374 5 226 3.38E-141 T 29-03-2018 CPU03_RS12240 0278154af010b644802b8d1278c0a253 860 Gene3D G3DSA:3.40.50.620 32 157 2.5E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS15330 818cd154110f201425e722bdcf1dd9a0 301 Gene3D G3DSA:1.20.1560.10 214 300 8.9E-4 T 29-03-2018 CPU03_RS15330 818cd154110f201425e722bdcf1dd9a0 301 SUPERFAMILY SSF90123 24 298 1.7E-12 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS15330 818cd154110f201425e722bdcf1dd9a0 301 Gene3D G3DSA:1.20.1560.10 16 204 4.1E-9 T 29-03-2018 CPU03_RS15330 818cd154110f201425e722bdcf1dd9a0 301 Pfam PF13748 ABC transporter transmembrane region 26 262 2.0E-78 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 PIRSF PIRSF006281 1 498 5.4E-236 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 Gene3D G3DSA:2.70.98.10 10 379 5.3E-165 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 10 494 6.8E-196 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 SUPERFAMILY SSF74650 10 381 1.44E-161 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 Gene3D G3DSA:2.60.40.10 385 498 1.2E-43 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 SUPERFAMILY SSF81296 384 497 3.22E-33 T 29-03-2018 IPR014756 Immunoglobulin E-set CPU03_RS02580 3d1861804d124d50580f9957fedbccb8 498 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 1 496 60.681 T 29-03-2018 IPR023704 Glucan biosynthesis protein G CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01021 OMPA domain signature 104 120 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01021 OMPA domain signature 59 81 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01021 OMPA domain signature 89 104 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.7E-7 T 29-03-2018 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 142 162 1.7E-7 T 29-03-2018 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 122 141 1.7E-7 T 29-03-2018 CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 Gene3D G3DSA:3.30.1330.60 23 162 1.1E-32 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 SUPERFAMILY SSF103088 47 159 5.49E-33 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS15610 561bec04d2a72d3fc6fedebdfe9e58f4 162 Pfam PF00691 OmpA family 59 153 3.5E-18 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS12920 7f42fa6c20a0bb9be433ca0f71c575c5 177 Pfam PF00581 Rhodanese-like domain 9 99 1.0E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS12920 7f42fa6c20a0bb9be433ca0f71c575c5 177 SUPERFAMILY SSF52821 2 155 4.85E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS12920 7f42fa6c20a0bb9be433ca0f71c575c5 177 SMART SM00450 5 103 2.4E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS12920 7f42fa6c20a0bb9be433ca0f71c575c5 177 Pfam PF11127 Protein of unknown function (DUF2892) 116 172 5.8E-11 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 CPU03_RS12920 7f42fa6c20a0bb9be433ca0f71c575c5 177 Gene3D G3DSA:3.40.250.10 1 109 5.4E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.012 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 Gene3D G3DSA:3.40.720.10 264 364 2.2E-5 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 Gene3D G3DSA:3.30.70.1250 116 235 1.3E-50 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.7E-43 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 SUPERFAMILY SSF143856 118 235 3.79E-49 T 29-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 PIRSF PIRSF001491 1 407 8.2E-165 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 SUPERFAMILY SSF53649 1 114 3.81E-71 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 SUPERFAMILY SSF53649 236 407 3.81E-71 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS05405 8a21920ddc31906609377718a9fc3be7 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 5.7E-189 T 29-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Gene3D G3DSA:3.30.70.260 691 790 5.9E-11 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF109604 451 553 3.71E-12 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Pfam PF01842 ACT domain 703 756 1.1E-6 T 29-03-2018 IPR002912 ACT domain CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Pfam PF01842 ACT domain 813 858 3.3E-7 T 29-03-2018 IPR002912 ACT domain CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Pfam PF08335 GlnD PII-uridylyltransferase 186 325 3.5E-38 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Gene3D G3DSA:3.30.460.10 47 181 5.6E-24 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Gene3D G3DSA:1.20.120.330 184 328 3.9E-26 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF55021 809 862 1.42E-8 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF81593 196 322 6.36E-12 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF55021 700 770 5.83E-9 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF81301 22 183 7.27E-26 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Gene3D G3DSA:3.30.70.260 803 883 3.8E-10 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 39 878 1.0E-300 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SMART SM00471 458 605 3.4E-10 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 884 338.959 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Gene3D G3DSA:1.10.3090.10 352 642 7.2E-41 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF81891 498 641 3.14E-9 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 SUPERFAMILY SSF81891 359 463 3.14E-9 T 29-03-2018 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 PIRSF PIRSF006288 17 884 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Pfam PF01909 Nucleotidyltransferase domain 77 112 2.7E-5 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CPU03_RS04200 1a808a4bb5e19e2cedbceb3018d7b628 884 Pfam PF01966 HD domain 462 595 1.3E-13 T 29-03-2018 IPR006674 HD domain CPU03_RS00910 2b022de93ed91dcb9979e7e2f5e1702c 303 Pfam PF02811 PHP domain 15 131 4.2E-8 T 29-03-2018 IPR004013 PHP domain GO:0003824 CPU03_RS00910 2b022de93ed91dcb9979e7e2f5e1702c 303 SUPERFAMILY SSF89550 176 274 2.94E-47 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CPU03_RS00910 2b022de93ed91dcb9979e7e2f5e1702c 303 SUPERFAMILY SSF89550 13 94 2.94E-47 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CPU03_RS00910 2b022de93ed91dcb9979e7e2f5e1702c 303 Gene3D G3DSA:3.20.20.140 13 274 2.1E-40 T 29-03-2018 CPU03_RS00910 2b022de93ed91dcb9979e7e2f5e1702c 303 SMART SM00481 14 81 2.5E-18 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00410 Phenol hydroxylase reductase family signature 37 49 2.6E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 212 2.6E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 2.6E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Pfam PF00175 Oxidoreductase NAD-binding domain 116 218 8.5E-15 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Gene3D G3DSA:3.10.20.30 235 332 2.4E-18 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Pfam PF00970 Oxidoreductase FAD-binding domain 36 104 1.1E-5 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 283 291 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Gene3D G3DSA:2.40.30.10 5 103 9.3E-17 T 29-03-2018 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Gene3D G3DSA:3.40.50.80 104 234 1.7E-26 T 29-03-2018 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 263 324 1.8E-12 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 SUPERFAMILY SSF54292 226 331 4.85E-22 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 3.7E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 3.7E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 140 149 3.7E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 37 47 3.7E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 163 3.7E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 SUPERFAMILY SSF52343 108 238 3.93E-33 T 29-03-2018 CPU03_RS14060 f80e1e3be7f93938dd48ed6bdfada7d2 332 SUPERFAMILY SSF63380 8 104 6.51E-22 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Pfam PF13247 4Fe-4S dicluster domain 47 97 3.5E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 SUPERFAMILY SSF54862 1 101 1.12E-39 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 SUPERFAMILY SSF54862 136 174 1.12E-39 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Pfam PF12798 4Fe-4S binding domain 143 163 0.027 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Gene3D G3DSA:3.30.70.20 19 64 3.8E-9 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Gene3D G3DSA:3.30.70.20 151 188 0.0099 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Gene3D G3DSA:3.30.70.20 1 18 0.0031 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Gene3D G3DSA:3.30.70.20 65 91 5.9E-16 T 29-03-2018 CPU03_RS10880 ebfe7d739ddc0bdd21c3dc9d67baac1d 204 Gene3D G3DSA:3.30.70.20 92 150 1.0E-10 T 29-03-2018 CPU03_RS09720 245c9b80bafbf267273199432f810571 405 SUPERFAMILY SSF55031 186 283 3.59E-13 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS09720 245c9b80bafbf267273199432f810571 405 SUPERFAMILY SSF53187 10 185 5.03E-53 T 29-03-2018 CPU03_RS09720 245c9b80bafbf267273199432f810571 405 SUPERFAMILY SSF53187 316 398 5.03E-53 T 29-03-2018 CPU03_RS09720 245c9b80bafbf267273199432f810571 405 Gene3D G3DSA:3.40.630.10 6 286 1.5E-47 T 29-03-2018 CPU03_RS09720 245c9b80bafbf267273199432f810571 405 Pfam PF07687 Peptidase dimerisation domain 183 287 9.5E-18 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS09720 245c9b80bafbf267273199432f810571 405 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 7 400 3.6E-223 T 29-03-2018 IPR017706 Peptidase M20/DapE, YgeY CPU03_RS09720 245c9b80bafbf267273199432f810571 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS09720 245c9b80bafbf267273199432f810571 405 Pfam PF01546 Peptidase family M20/M25/M40 78 395 9.8E-24 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 SUPERFAMILY SSF50692 683 831 8.36E-45 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Gene3D G3DSA:2.40.40.20 661 817 2.2E-31 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 514 531 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 55 834 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 729 756 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 SUPERFAMILY SSF53706 56 673 4.71E-157 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 9 834 0.0 T 29-03-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Gene3D G3DSA:3.40.228.10 193 440 9.9E-51 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Gene3D G3DSA:3.40.228.10 472 529 0.025 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Gene3D G3DSA:3.90.55.10 49 135 1.8E-15 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Gene3D G3DSA:3.90.55.10 537 622 3.8E-23 T 29-03-2018 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Pfam PF01568 Molydopterin dinucleotide binding domain 689 809 6.7E-24 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS06505 4bd306c0d8de9b547f2d11e599d99781 848 Pfam PF00384 Molybdopterin oxidoreductase 98 571 1.4E-99 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Gene3D G3DSA:1.10.260.40 21 61 8.8E-14 T 29-03-2018 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 SUPERFAMILY SSF53822 63 315 3.53E-59 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 315 9.8E-31 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Gene3D G3DSA:3.40.50.2300 62 171 1.6E-25 T 29-03-2018 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 SMART SM00354 5 75 4.3E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Gene3D G3DSA:1.10.10.10 2 20 0.0024 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 29-03-2018 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 2.8E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 SUPERFAMILY SSF47413 5 62 3.44E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS07300 134f2195ee25317b709af5291eb118e3 332 Gene3D G3DSA:3.40.50.2300 172 332 3.3E-38 T 29-03-2018 CPU03_RS07605 9f8d6b7b25340b7be54a16741b7a6c8a 368 SUPERFAMILY SSF53756 2 364 1.67E-59 T 29-03-2018 CPU03_RS07605 9f8d6b7b25340b7be54a16741b7a6c8a 368 Gene3D G3DSA:3.40.50.2000 175 347 4.0E-35 T 29-03-2018 CPU03_RS07605 9f8d6b7b25340b7be54a16741b7a6c8a 368 Pfam PF13439 Glycosyltransferase Family 4 12 163 1.5E-8 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CPU03_RS07605 9f8d6b7b25340b7be54a16741b7a6c8a 368 Pfam PF00534 Glycosyl transferases group 1 173 343 6.1E-26 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS07605 9f8d6b7b25340b7be54a16741b7a6c8a 368 Gene3D G3DSA:3.40.50.2000 2 174 3.1E-10 T 29-03-2018 CPU03_RS04610 01790d38264df400932ed03e7a0afe45 250 SUPERFAMILY SSF160950 6 250 3.92E-89 T 29-03-2018 IPR009777 Cell division protein ZapD CPU03_RS04610 01790d38264df400932ed03e7a0afe45 250 Gene3D G3DSA:1.10.3900.10 16 177 2.5E-60 T 29-03-2018 CPU03_RS04610 01790d38264df400932ed03e7a0afe45 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.259 T 29-03-2018 IPR009777 Cell division protein ZapD CPU03_RS04610 01790d38264df400932ed03e7a0afe45 250 Pfam PF07072 Cell division protein 22 228 1.6E-75 T 29-03-2018 IPR009777 Cell division protein ZapD CPU03_RS04610 01790d38264df400932ed03e7a0afe45 250 Gene3D G3DSA:2.60.440.10 178 250 1.2E-25 T 29-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.4E-169 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Pfam PF02780 Transketolase, C-terminal domain 547 655 1.7E-19 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Gene3D G3DSA:3.40.50.970 365 540 4.5E-42 T 29-03-2018 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 SUPERFAMILY SSF52518 333 526 7.2E-69 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Gene3D G3DSA:3.40.50.970 1 364 1.9E-128 T 29-03-2018 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 SUPERFAMILY SSF52518 5 321 1.88E-121 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Gene3D G3DSA:3.40.50.920 541 664 2.0E-30 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 SMART SM00861 355 525 5.4E-67 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 SUPERFAMILY SSF52922 533 664 3.27E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS10525 f0e626228141305c4f88670789416a1d 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 8.4E-47 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 SMART SM00382 28 221 1.4E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 Gene3D G3DSA:3.40.50.300 1 255 6.6E-79 T 29-03-2018 CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 SUPERFAMILY SSF52540 4 243 3.42E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 Pfam PF00005 ABC transporter 19 173 5.5E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14475 70724ed4466abab60d6e98d138f1c10a 258 PIRSF PIRSF039085 1 249 7.3E-111 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 PIRSF PIRSF006648 11 253 3.9E-24 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 Pfam PF01061 ABC-2 type transporter 9 218 4.3E-37 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 4.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 4.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 4.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS04495 7924f2b17a08ab59dee18b081265cbb3 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 4.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Gene3D G3DSA:3.40.50.150 138 383 2.3E-32 T 29-03-2018 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 PIRSF PIRSF037618 1 702 1.0E-295 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Gene3D G3DSA:3.30.750.80 391 490 3.1E-6 T 29-03-2018 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 437 657 3.8E-22 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Pfam PF02926 THUMP domain 19 153 8.6E-17 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Gene3D G3DSA:3.40.50.150 491 701 9.9E-41 T 29-03-2018 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 SUPERFAMILY SSF53335 140 217 2.61E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 SUPERFAMILY SSF53335 258 372 2.61E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 701 32.468 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.2E-62 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 SMART SM00981 56 154 1.8E-21 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CPU03_RS02115 3ee01438007e11790c91aafcbaa95b58 705 SUPERFAMILY SSF53335 395 700 3.51E-67 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 Gene3D G3DSA:3.40.50.450 1 210 1.1E-83 T 29-03-2018 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 Gene3D G3DSA:3.40.50.450 211 307 9.6E-10 T 29-03-2018 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 SUPERFAMILY SSF53784 3 310 5.1E-114 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PIRSF PIRSF000532 1 320 3.7E-129 T 29-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 Pfam PF00365 Phosphofructokinase 4 276 2.8E-108 T 29-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 29-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.938 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.2E-82 T 29-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CPU03_RS08425 a7867c2a8980b3c167be98b4b5bae98b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 300 1.2E-125 T 29-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 PIRSF PIRSF036427 1 238 4.8E-71 T 29-03-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 SUPERFAMILY SSF53790 1 234 2.49E-41 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 3.8E-42 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 7.5E-76 T 29-03-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS15075 7f6aad1a94f6e7a673ffbb9f0fb82065 243 Gene3D G3DSA:3.40.1010.10 2 147 2.0E-23 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15715 1483d1af61be48ec4eb65bba22091a6a 350 SUPERFAMILY SSF54506 2 167 2.2E-62 T 29-03-2018 CPU03_RS15715 1483d1af61be48ec4eb65bba22091a6a 350 Pfam PF04303 PrpF protein 1 350 7.5E-147 T 29-03-2018 IPR007400 PrpF protein CPU03_RS15715 1483d1af61be48ec4eb65bba22091a6a 350 SUPERFAMILY SSF54506 170 350 5.1E-57 T 29-03-2018 CPU03_RS15715 1483d1af61be48ec4eb65bba22091a6a 350 Gene3D G3DSA:3.10.310.10 175 331 6.7E-51 T 29-03-2018 CPU03_RS15715 1483d1af61be48ec4eb65bba22091a6a 350 Gene3D G3DSA:3.10.310.10 1 174 1.4E-71 T 29-03-2018 CPU03_RS01450 c82c06f489bca0f1bc0d7046b1dba236 88 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 7.2E-24 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CPU03_RS01450 c82c06f489bca0f1bc0d7046b1dba236 88 SUPERFAMILY SSF63393 4 42 1.96E-5 T 29-03-2018 IPR029040 RNA polymerase subunit RPABC4/transcription elongation factor Spt4 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-75955 CPU03_RS01450 c82c06f489bca0f1bc0d7046b1dba236 88 SMART SM00834 1 42 1.3E-21 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CPU03_RS01450 c82c06f489bca0f1bc0d7046b1dba236 88 Pfam PF09723 Zinc ribbon domain 1 41 1.6E-17 T 29-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain CPU03_RS06015 986faacbcbc29d171870544834256266 901 Pfam PF00009 Elongation factor Tu GTP binding domain 404 560 6.4E-35 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:3.40.50.300 396 570 2.7E-39 T 29-03-2018 CPU03_RS06015 986faacbcbc29d171870544834256266 901 SUPERFAMILY SSF52156 677 807 1.57E-38 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:2.40.30.10 573 708 5.8E-30 T 29-03-2018 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:3.30.56.50 4 45 6.3E-10 T 29-03-2018 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:3.30.56.50 327 368 3.6E-10 T 29-03-2018 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.8E-8 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CPU03_RS06015 986faacbcbc29d171870544834256266 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 375 9.6E-15 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:2.40.30.10 801 899 1.2E-31 T 29-03-2018 CPU03_RS06015 986faacbcbc29d171870544834256266 901 SUPERFAMILY SSF52540 400 566 5.26E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06015 986faacbcbc29d171870544834256266 901 Gene3D G3DSA:3.40.50.10050 709 779 4.1E-26 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 58 94 6.2E-15 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CPU03_RS06015 986faacbcbc29d171870544834256266 901 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 404 559 1.2E-33 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS06015 986faacbcbc29d171870544834256266 901 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 317 900 5.3E-295 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Pfam PF11987 Translation-initiation factor 2 685 790 8.8E-37 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CPU03_RS06015 986faacbcbc29d171870544834256266 901 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 898 17.69 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS06015 986faacbcbc29d171870544834256266 901 SUPERFAMILY SSF50447 801 898 2.95E-34 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS06015 986faacbcbc29d171870544834256266 901 SUPERFAMILY SSF50447 573 655 4.71E-23 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS06015 986faacbcbc29d171870544834256266 901 SUPERFAMILY SSF46955 3 50 1.5E-11 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS06015 986faacbcbc29d171870544834256266 901 ProSitePatterns PS01176 Initiation factor 2 signature. 851 873 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PIRSF PIRSF000149 1 331 2.1E-135 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.7E-45 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.7E-45 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.7E-45 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.7E-45 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.7E-45 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 Gene3D G3DSA:3.30.360.10 160 314 5.7E-81 T 29-03-2018 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 8.2E-69 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 SUPERFAMILY SSF51735 3 166 3.12E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 SMART SM00846 3 150 1.5E-98 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.5E-135 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 Gene3D G3DSA:3.40.50.720 1 159 3.2E-81 T 29-03-2018 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.8E-41 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS01170 1f23e3f7645cb9328c6f76df1980ff81 331 SUPERFAMILY SSF55347 149 312 4.46E-79 T 29-03-2018 CPU03_RS14170 02ac9fc6b6a3c00b62d095175128b875 204 Gene3D G3DSA:1.10.3480.10 2 204 3.1E-48 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS14170 02ac9fc6b6a3c00b62d095175128b875 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 40.399 T 29-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CPU03_RS14170 02ac9fc6b6a3c00b62d095175128b875 204 PIRSF PIRSF004690 2 204 4.0E-65 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CPU03_RS14170 02ac9fc6b6a3c00b62d095175128b875 204 Pfam PF02613 Nitrate reductase delta subunit 56 161 3.3E-24 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS14170 02ac9fc6b6a3c00b62d095175128b875 204 SUPERFAMILY SSF89155 5 202 7.46E-51 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06560 0ae01de0e7f2afad84547a69d1665ac4 223 Pfam PF06693 Protein of unknown function (DUF1190) 38 208 3.0E-56 T 29-03-2018 IPR009576 Biofilm formation YgiB CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.9E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.9E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.9E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 3.5E-6 T 29-03-2018 CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 Gene3D G3DSA:3.40.50.720 1 51 5.1E-11 T 29-03-2018 CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 Gene3D G3DSA:3.40.50.720 52 244 7.8E-67 T 29-03-2018 CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 6.8E-68 T 29-03-2018 CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 SUPERFAMILY SSF51735 4 243 1.66E-86 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS14585 a3c0c5425df33ad939c7d68ac1af929c 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.2E-101 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 PIRSF PIRSF002741 1 516 1.1E-74 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 Gene3D G3DSA:3.40.190.10 172 288 7.0E-26 T 29-03-2018 CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 Gene3D G3DSA:3.10.105.10 289 479 1.3E-36 T 29-03-2018 CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 429 3.7E-80 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 Gene3D G3DSA:3.90.76.10 50 171 6.4E-24 T 29-03-2018 CPU03_RS00660 e83e6bf6c2088d3e4a1afc86924c39f4 528 SUPERFAMILY SSF53850 28 502 2.17E-95 T 29-03-2018 CPU03_RS11245 c58ba51531bbee9da5284902054b43b4 156 Gene3D G3DSA:3.30.420.10 1 154 8.6E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11245 c58ba51531bbee9da5284902054b43b4 156 SUPERFAMILY SSF53098 4 143 2.4E-59 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11245 c58ba51531bbee9da5284902054b43b4 156 Pfam PF00075 RNase H 3 141 5.3E-55 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CPU03_RS11245 c58ba51531bbee9da5284902054b43b4 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 38.39 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 SUPERFAMILY SSF55804 2 140 1.44E-39 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 PRINTS PR00107 Phosphocarrier protein signature 341 358 6.6E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 PRINTS PR00107 Phosphocarrier protein signature 326 341 6.6E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 PRINTS PR00107 Phosphocarrier protein signature 298 314 6.6E-16 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 SUPERFAMILY SSF55594 288 376 1.16E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 327 342 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 298 305 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 287 369 1.2E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 1.3E-30 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 Gene3D G3DSA:3.30.1340.10 283 370 9.1E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 Pfam PF00381 PTS HPr component phosphorylation site 288 369 3.1E-23 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 Gene3D G3DSA:3.40.930.10 3 143 3.2E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 Gene3D G3DSA:3.40.930.10 147 280 2.2E-8 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS13695 a47e6277fa6c1a14270fa60dfa4a48b9 378 SUPERFAMILY SSF55804 149 277 2.27E-16 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS05485 73ac67c85d9a22a9c7fff62b636ff261 255 Pfam PF02535 ZIP Zinc transporter 101 245 6.0E-19 T 29-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 SUPERFAMILY SSF88659 122 183 1.87E-18 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 Gene3D G3DSA:1.10.1740.10 1 113 9.4E-30 T 29-03-2018 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 7.9E-100 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 Pfam PF08281 Sigma-70, region 4 130 180 6.2E-19 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 4.9E-30 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 Gene3D G3DSA:1.10.10.10 114 187 1.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 Pfam PF04542 Sigma-70 region 2 25 91 2.6E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS11730 2c723d6c8750267012a0b1902b744a43 191 SUPERFAMILY SSF88946 2 103 2.2E-30 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 738 1.9E-24 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 2.5E-14 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Gene3D G3DSA:3.40.50.300 447 657 1.2E-42 T 29-03-2018 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Gene3D G3DSA:3.40.50.300 170 355 3.3E-28 T 29-03-2018 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 3.9E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 3.9E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 3.9E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 3.9E-36 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Gene3D G3DSA:1.10.8.60 658 763 1.0E-24 T 29-03-2018 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SUPERFAMILY SSF52540 174 430 4.18E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 347 5.2E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SUPERFAMILY SSF52540 442 739 2.48E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Gene3D G3DSA:1.10.8.60 356 442 6.4E-27 T 29-03-2018 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SUPERFAMILY SSF81923 1 141 5.23E-58 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 650 5.2E-48 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 Gene3D G3DSA:1.10.1780.10 1 143 1.3E-27 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SMART SM01086 658 747 8.6E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SMART SM00382 211 355 3.0E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14100 fc16cbd9ea87ef46df810c7d3736fc32 764 SMART SM00382 492 641 7.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Gene3D G3DSA:3.40.50.720 457 631 6.1E-24 T 29-03-2018 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 17 455 7.5E-63 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 SUPERFAMILY SSF53633 14 301 6.15E-55 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Gene3D G3DSA:3.30.360.10 632 789 1.1E-50 T 29-03-2018 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Pfam PF00696 Amino acid kinase family 14 286 9.0E-42 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 ProSitePatterns PS00324 Aspartokinase signature. 16 24 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 467 602 3.5E-21 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Pfam PF00742 Homoserine dehydrogenase 610 805 8.0E-43 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 PIRSF PIRSF000727 14 812 1.1E-286 T 29-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 SUPERFAMILY SSF55347 610 793 4.32E-46 T 29-03-2018 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 656 678 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 SUPERFAMILY SSF51735 459 632 4.2E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS08540 faa6e56e2d7fa2cd5a1337bc0e1fa5c9 812 Gene3D G3DSA:3.40.1160.10 11 285 1.4E-48 T 29-03-2018 CPU03_RS07920 0818377b0cdb32ba523dd07edac5cdb6 305 Gene3D G3DSA:3.40.1130.10 47 252 2.0E-19 T 29-03-2018 CPU03_RS07920 0818377b0cdb32ba523dd07edac5cdb6 305 SMART SM00563 92 234 3.0E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS07920 0818377b0cdb32ba523dd07edac5cdb6 305 SUPERFAMILY SSF69593 22 292 3.53E-28 T 29-03-2018 CPU03_RS07920 0818377b0cdb32ba523dd07edac5cdb6 305 Pfam PF01553 Acyltransferase 79 196 5.1E-12 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.925 T 29-03-2018 IPR023017 Transport protein YbjL, putative CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Gene3D G3DSA:3.30.70.1450 216 291 6.7E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Gene3D G3DSA:3.30.70.1450 295 375 1.4E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Pfam PF06826 Predicted Permease Membrane Region 17 181 1.5E-39 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.3E-42 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Pfam PF02080 TrkA-C domain 305 371 7.9E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 Pfam PF02080 TrkA-C domain 227 281 1.6E-8 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 168 8.4E-39 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 4.6E-45 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 SUPERFAMILY SSF116726 291 374 3.4E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13905 25d8a382dc8b0e6fd021df4ed0d0305e 562 SUPERFAMILY SSF116726 227 282 4.32E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS14180 c5f06ae34e3676997ddc43d73bbaa977 381 Gene3D G3DSA:1.20.1250.20 189 377 1.6E-23 T 29-03-2018 CPU03_RS14180 c5f06ae34e3676997ddc43d73bbaa977 381 Gene3D G3DSA:1.20.1250.20 2 187 1.9E-21 T 29-03-2018 CPU03_RS14180 c5f06ae34e3676997ddc43d73bbaa977 381 Pfam PF07690 Major Facilitator Superfamily 11 316 8.6E-26 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS14180 c5f06ae34e3676997ddc43d73bbaa977 381 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 381 35.68 T 29-03-2018 IPR023745 MSF-type transporter, YcaD CPU03_RS14180 c5f06ae34e3676997ddc43d73bbaa977 381 SUPERFAMILY SSF103473 6 371 1.31E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 SUPERFAMILY SSF52518 58 467 9.2E-141 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 SUPERFAMILY SSF52922 702 885 6.28E-62 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 PIRSF PIRSF000156 1 887 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 Gene3D G3DSA:3.40.50.970 472 706 7.7E-67 T 29-03-2018 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 1.2E-9 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 Gene3D G3DSA:3.40.50.920 707 887 2.2E-41 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 SUPERFAMILY SSF52518 474 701 1.13E-98 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 Gene3D G3DSA:3.40.50.970 57 471 3.3E-83 T 29-03-2018 CPU03_RS04560 6f9a5239ccc6574682c35a53131dc125 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 886 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CPU03_RS16660 6ea508851b57357c82801a2cded05da6 122 Pfam PF13564 DoxX-like family 5 103 3.5E-19 T 29-03-2018 IPR032808 DoxX family CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Gene3D G3DSA:3.30.1360.120 1 121 1.4E-41 T 29-03-2018 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.4E-35 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 5.0E-22 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 3.3E-102 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 1.7E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 SUPERFAMILY SSF116878 379 454 9.02E-51 T 29-03-2018 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 SUPERFAMILY SSF116878 121 220 9.02E-51 T 29-03-2018 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.213 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Gene3D G3DSA:1.20.120.430 282 454 1.5E-33 T 29-03-2018 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Pfam PF12631 MnmE helical domain 123 451 2.0E-59 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 Gene3D G3DSA:1.20.120.430 122 281 4.3E-28 T 29-03-2018 CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 SUPERFAMILY SSF52540 72 152 7.96E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08180 803a372e9b480d3cedf6639281491cd8 454 SUPERFAMILY SSF52540 188 372 7.96E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 Gene3D G3DSA:3.30.499.10 320 471 5.0E-52 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 286 300 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 133 148 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 108 116 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 119 132 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 195 208 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 82 95 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 209 222 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 399 412 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 PRINTS PR00415 Aconitase family signature 343 354 2.1E-50 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 SUPERFAMILY SSF53732 1 466 6.54E-165 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 Gene3D G3DSA:3.30.499.10 1 152 4.8E-40 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.638 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.5E-256 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 8.5E-156 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 Gene3D G3DSA:3.40.1060.10 153 288 3.6E-43 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04755 dbb7ba368ee70a92cfe97d1462298971 471 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 SUPERFAMILY SSF55811 5 130 6.36E-35 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 Pfam PF00293 NUDIX domain 7 129 3.5E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.1E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.1E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 PRINTS PR01401 Mutator MutT protein signature 3 24 8.9E-9 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 PRINTS PR01401 Mutator MutT protein signature 80 93 8.9E-9 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 130 2.5E-41 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CPU03_RS04620 8570157d077a979fd3bfba4c95122340 133 Gene3D G3DSA:3.90.79.10 3 133 9.9E-30 T 29-03-2018 CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 Gene3D G3DSA:3.40.50.150 159 341 1.9E-30 T 29-03-2018 CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 SUPERFAMILY SSF53335 154 316 9.65E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 4.8E-54 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 Pfam PF05175 Methyltransferase small domain 167 332 8.3E-58 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CPU03_RS05460 6e8461ab907e11b4dafde4cbf52d3584 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 43.746 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 SUPERFAMILY SSF81333 3 77 6.93E-18 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08075 7b9971ed6c88455d372e2e1c8ecf572d 79 Gene3D G3DSA:1.20.20.10 1 79 7.5E-16 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CPU03_RS07755 936db7ba490f57ea0a66ed6c02b1ed60 241 SUPERFAMILY SSF56784 37 241 1.84E-53 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07755 936db7ba490f57ea0a66ed6c02b1ed60 241 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 13 241 3.4E-82 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS07755 936db7ba490f57ea0a66ed6c02b1ed60 241 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 17 221 3.8E-25 T 29-03-2018 IPR005519 Acid phosphatase, class B-like CPU03_RS07755 936db7ba490f57ea0a66ed6c02b1ed60 241 Gene3D G3DSA:3.40.50.1000 30 241 7.6E-30 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 598 3.6E-50 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Gene3D G3DSA:3.30.450.20 34 184 1.3E-11 T 29-03-2018 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 SMART SM00283 384 631 9.5E-83 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Gene3D G3DSA:3.30.450.20 185 302 1.3E-10 T 29-03-2018 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 SUPERFAMILY SSF58104 351 632 1.7E-69 T 29-03-2018 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Pfam PF02743 Cache domain 39 291 4.2E-22 T 29-03-2018 IPR033479 Double Cache domain 1 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Gene3D G3DSA:1.10.287.950 328 434 6.5E-9 T 29-03-2018 CPU03_RS11940 79606decc7511afe35b268a0d87f38ab 632 Gene3D G3DSA:1.10.287.950 435 632 4.4E-49 T 29-03-2018 CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 Pfam PF00072 Response regulator receiver domain 6 116 1.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 SUPERFAMILY SSF52172 1 178 1.37E-40 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 2.1E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 Gene3D G3DSA:1.10.10.10 129 233 3.3E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 SMART SM00862 154 230 8.6E-31 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 SMART SM00448 4 115 2.0E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08820 d92ca09b385df1b03f6ee3b5dfae04c3 237 Gene3D G3DSA:3.40.50.2300 1 128 2.1E-36 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:3.30.56.10 1 53 1.8E-11 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.7E-20 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.722 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.2E-287 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:3.30.56.10 402 475 1.2E-23 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:3.30.70.380 698 794 1.2E-23 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SUPERFAMILY SSF54991 696 794 1.83E-30 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SMART SM00896 701 794 6.4E-45 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Pfam PF01588 Putative tRNA binding domain 45 144 1.1E-27 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:2.40.50.140 54 154 1.1E-43 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SUPERFAMILY SSF50249 35 198 8.32E-51 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SMART SM00874 403 471 3.9E-30 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SUPERFAMILY SSF56037 196 394 2.88E-76 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SUPERFAMILY SSF46955 403 475 1.46E-20 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:3.30.930.10 494 690 6.9E-37 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 4.6E-28 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Pfam PF03483 B3/4 domain 212 385 5.4E-71 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SMART SM00873 212 385 7.3E-98 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 SUPERFAMILY SSF55681 467 690 1.04E-53 T 29-03-2018 CPU03_RS16785 51125692e7323864840937d66de3bf60 795 Gene3D G3DSA:3.50.40.10 195 395 3.7E-74 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 Gene3D G3DSA:3.40.190.10 90 179 7.8E-21 T 29-03-2018 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 Gene3D G3DSA:3.40.190.10 180 271 2.0E-26 T 29-03-2018 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 SUPERFAMILY SSF46785 4 86 5.0E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 Pfam PF03466 LysR substrate binding domain 89 294 4.5E-46 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 SUPERFAMILY SSF53850 90 296 9.05E-42 T 29-03-2018 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 Gene3D G3DSA:1.10.10.10 1 85 5.8E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.5E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS16405 5056f70cb6533084e320f295230da2da 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 Gene3D G3DSA:3.40.1080.10 2 210 2.0E-64 T 29-03-2018 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 1.1E-91 T 29-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 SUPERFAMILY SSF100950 2 210 2.06E-66 T 29-03-2018 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 SMART SM00882 5 198 1.4E-62 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 Pfam PF01144 Coenzyme A transferase 5 177 3.5E-37 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS14920 4faeb096679ea2fdeb7043c7060f8a7f 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 29-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Gene3D G3DSA:3.40.605.10 651 897 6.9E-71 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 609 1110 3.0E-237 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Gene3D G3DSA:3.20.20.220 178 609 5.3E-108 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 PIRSF PIRSF000197 73 1315 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 SUPERFAMILY SSF81935 87 260 3.27E-65 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Gene3D G3DSA:3.40.309.10 898 1098 4.3E-46 T 29-03-2018 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Pfam PF01619 Proline dehydrogenase 269 568 7.7E-98 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Gene3D G3DSA:1.10.1220.10 2 48 1.9E-5 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Pfam PF00171 Aldehyde dehydrogenase family 664 1104 1.5E-112 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 146 258 7.4E-46 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 909 920 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 Gene3D G3DSA:1.20.5.550 88 136 2.7E-16 T 29-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 SUPERFAMILY SSF53720 655 1109 1.18E-125 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 SUPERFAMILY SSF51730 261 616 7.45E-122 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CPU03_RS16165 a7ada2bb0121ace4421da9a14169c61b 1315 SUPERFAMILY SSF47598 3 45 1.56E-10 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 2.3E-18 T 29-03-2018 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 2.3E-18 T 29-03-2018 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.3E-18 T 29-03-2018 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.3E-18 T 29-03-2018 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 5.0E-122 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 Gene3D G3DSA:3.50.50.60 7 362 4.8E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 SUPERFAMILY SSF51905 7 178 6.8E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 SUPERFAMILY SSF51905 267 382 6.8E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12310 58adede022d25b88e5d4d91daaeaacf1 391 Pfam PF01494 FAD binding domain 8 340 9.4E-30 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 7.1E-47 T 29-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 29-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 5.2E-134 T 29-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.8E-45 T 29-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 SUPERFAMILY SSF51735 1 145 3.17E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 Gene3D G3DSA:3.90.110.10 148 312 2.8E-40 T 29-03-2018 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 PIRSF PIRSF000102 1 311 1.2E-59 T 29-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 Gene3D G3DSA:3.40.50.720 2 147 1.9E-39 T 29-03-2018 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 SUPERFAMILY SSF56327 146 311 5.19E-40 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CPU03_RS06120 f5a6eb0885031926abdc87b560a26dba 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.759 T 29-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Gene3D G3DSA:3.10.290.10 331 424 6.5E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 3.0E-143 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 SUPERFAMILY SSF52374 4 328 3.11E-107 T 29-03-2018 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.1E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.1E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.1E-31 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 SMART SM00363 357 419 1.3E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Gene3D G3DSA:3.40.50.620 1 227 3.5E-69 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Gene3D G3DSA:1.10.240.10 228 330 6.5E-33 T 29-03-2018 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.982 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 2.6E-89 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 SUPERFAMILY SSF55174 327 423 2.88E-21 T 29-03-2018 CPU03_RS16300 c3c6c24a4e35e73f7557070be2df4f08 424 Pfam PF01479 S4 domain 359 403 1.6E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 2.8E-74 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 169 290 5.9E-35 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 SUPERFAMILY SSF51735 1 168 1.03E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 Gene3D G3DSA:3.40.50.720 1 168 4.4E-25 T 29-03-2018 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 SUPERFAMILY SSF48179 169 290 4.08E-36 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 144 5.2E-24 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CPU03_RS03380 692bd58ff6b39c13c90b898f037dc47e 305 Gene3D G3DSA:1.10.1040.10 169 296 8.6E-39 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 SUPERFAMILY SSF47757 20 94 2.62E-24 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 Gene3D G3DSA:3.40.50.150 94 287 2.1E-45 T 29-03-2018 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PIRSF PIRSF000410 8 288 4.6E-98 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 5.1E-46 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 1.9E-56 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 SUPERFAMILY SSF53335 95 284 1.21E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 SMART SM00138 27 287 7.3E-113 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 Gene3D G3DSA:1.10.155.10 19 93 8.4E-26 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CPU03_RS01760 4303df3fa19c74a97a72e7141831e642 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 2.5E-19 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CPU03_RS06450 e2bbf1a209cab676a45cd61d08e0bb71 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 4.8E-203 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS06450 e2bbf1a209cab676a45cd61d08e0bb71 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.1E-143 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS06450 e2bbf1a209cab676a45cd61d08e0bb71 433 PIRSF PIRSF004539 1 433 7.5E-178 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 Pfam PF00155 Aminotransferase class I and II 25 346 6.3E-35 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 SUPERFAMILY SSF53383 4 354 1.08E-79 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 Gene3D G3DSA:3.40.640.10 36 246 1.3E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 Gene3D G3DSA:3.90.1150.10 247 356 2.6E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS00385 0c146686d819b8364a709c26df4c0078 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 351 2.4E-101 T 29-03-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CPU03_RS00400 f6be03389c194a813b75d5b829da942f 337 SUPERFAMILY SSF141523 176 236 2.49E-27 T 29-03-2018 CPU03_RS00400 f6be03389c194a813b75d5b829da942f 337 SUPERFAMILY SSF141523 94 148 2.49E-27 T 29-03-2018 CPU03_RS00400 f6be03389c194a813b75d5b829da942f 337 Gene3D G3DSA:2.40.440.10 94 237 2.1E-29 T 29-03-2018 CPU03_RS00400 f6be03389c194a813b75d5b829da942f 337 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 3.1E-17 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CPU03_RS12840 d4dd12f1caf0e2cd586c2601ad0a6b87 236 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 24 235 3.8E-33 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin CPU03_RS12840 d4dd12f1caf0e2cd586c2601ad0a6b87 236 Gene3D G3DSA:2.40.160.40 27 236 1.3E-21 T 29-03-2018 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 SUPERFAMILY SSF103088 214 338 2.62E-33 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 Pfam PF01389 OmpA-like transmembrane domain 23 197 5.5E-62 T 29-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 Pfam PF00691 OmpA family 226 319 1.3E-21 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 Gene3D G3DSA:2.40.160.20 9 210 3.2E-42 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 Gene3D G3DSA:3.30.1330.60 211 350 2.4E-37 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 SUPERFAMILY SSF56925 22 197 4.71E-39 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01021 OMPA domain signature 259 274 7.1E-22 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01021 OMPA domain signature 274 290 7.1E-22 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01021 OMPA domain signature 227 249 7.1E-22 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 168 182 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 182 196 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 283 302 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 317 330 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 107 123 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 215 230 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS02070 1ee783ecfd8ce3e312da08293e20628e 350 PRINTS PR01022 Outer membrane protein A signature 244 263 2.4E-61 T 29-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 Pfam PF05746 DALR anticodon binding domain 582 679 1.4E-8 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.656 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.2E-212 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 SUPERFAMILY SSF109604 339 539 1.99E-19 T 29-03-2018 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 Gene3D G3DSA:1.10.730.10 574 683 2.0E-12 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.3E-36 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 4.3E-36 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 4.3E-36 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 4.3E-36 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08260 4b4f38227e5edeb0aa07437f3acd2aa0 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.3E-36 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 3.9E-33 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 SMART SM00852 183 320 3.1E-42 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Gene3D G3DSA:3.90.105.10 29 63 1.6E-11 T 29-03-2018 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Gene3D G3DSA:2.170.190.11 64 144 1.2E-26 T 29-03-2018 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 SUPERFAMILY SSF63867 330 410 5.36E-24 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 6.6E-21 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 SUPERFAMILY SSF53218 180 326 9.68E-44 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 SUPERFAMILY SSF63882 7 179 2.49E-54 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Gene3D G3DSA:2.40.340.10 332 404 2.3E-22 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Pfam PF00994 Probable molybdopterin binding domain 185 319 2.1E-26 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 4.6E-44 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS02565 25db438b6a9691f7e12235d2621225b9 412 Gene3D G3DSA:3.40.980.10 154 327 7.6E-56 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF55785 506 609 5.06E-28 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF13426 PAS domain 510 611 9.8E-15 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF13426 PAS domain 380 483 1.0E-16 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM01079 80 273 1.2E-50 T 29-03-2018 IPR006189 CHASE domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.30.450.20 681 767 8.1E-19 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF01627 Hpt domain 1329 1401 3.3E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF47384 749 830 3.14E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF03924 CHASE domain 83 262 7.9E-47 T 29-03-2018 IPR006189 CHASE domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF52172 1009 1141 2.7E-24 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.40.50.2300 1150 1287 3.6E-40 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00387 875 993 1.6E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF47226 1257 1270 7.07E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF47226 1308 1392 7.07E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF00072 Response regulator receiver domain 1161 1274 8.6E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF00072 Response regulator receiver domain 1011 1129 7.3E-15 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF55785 672 751 2.79E-10 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.30.450.20 635 680 3.8E-9 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 975 988 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 916 930 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 969 1.4E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00448 1159 1274 3.9E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00448 1009 1130 7.8E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00086 701 743 5.3 T 29-03-2018 IPR001610 PAC motif CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00086 570 612 4.0E-7 T 29-03-2018 IPR001610 PAC motif CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00086 442 484 5.1E-5 T 29-03-2018 IPR001610 PAC motif CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.30.565.10 832 996 8.5E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 875 989 7.2E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00091 624 694 29.0 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00091 369 436 2.0E-8 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00091 498 564 2.7E-5 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.30.450.20 354 499 3.6E-28 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.40.50.2300 997 1145 2.9E-26 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SMART SM00388 763 828 1.8E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 509 616 2.5E-14 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 368 491 5.3E-18 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 674 749 7.8E-6 T 29-03-2018 IPR000014 PAS domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 763 828 4.7E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF55874 817 988 1.57E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:1.20.120.160 1302 1471 2.4E-16 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:3.30.450.20 500 634 2.0E-27 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 Gene3D G3DSA:1.10.287.130 768 824 9.0E-19 T 29-03-2018 CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF52172 1155 1278 6.83E-39 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS15575 2b1994cf500dbf2770809a863ef97bcc 1521 SUPERFAMILY SSF55785 378 484 1.92E-24 T 29-03-2018 IPR000014 PAS domain CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 SUPERFAMILY SSF46548 107 235 2.27E-40 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.1E-89 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 Gene3D G3DSA:1.10.1060.10 107 238 9.2E-30 T 29-03-2018 CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 Gene3D G3DSA:3.10.20.30 1 106 6.8E-34 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 SUPERFAMILY SSF54292 1 106 6.69E-32 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 4.6E-10 T 29-03-2018 CPU03_RS12525 db32921dcd467a35d6a0b1e151e1dbde 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 1.0E-31 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS16190 b27e78420c14ca61212adefb9b84aefb 460 Gene3D G3DSA:1.20.1600.10 19 460 6.3E-92 T 29-03-2018 CPU03_RS16190 b27e78420c14ca61212adefb9b84aefb 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 457 4.8E-103 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CPU03_RS16190 b27e78420c14ca61212adefb9b84aefb 460 SUPERFAMILY SSF56954 6 459 3.79E-100 T 29-03-2018 CPU03_RS16190 b27e78420c14ca61212adefb9b84aefb 460 Pfam PF02321 Outer membrane efflux protein 65 247 9.0E-19 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CPU03_RS16190 b27e78420c14ca61212adefb9b84aefb 460 Pfam PF02321 Outer membrane efflux protein 275 455 1.5E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CPU03_RS09165 a043675392d7d400c42c101e32391739 673 SUPERFAMILY SSF48695 299 506 3.63E-52 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS09165 a043675392d7d400c42c101e32391739 673 SUPERFAMILY SSF48695 133 243 3.63E-52 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS09165 a043675392d7d400c42c101e32391739 673 SUPERFAMILY SSF48695 539 670 3.63E-52 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS09165 a043675392d7d400c42c101e32391739 673 Pfam PF13435 Cytochrome c554 and c-prime 146 168 7.3E-4 T 29-03-2018 IPR023155 Cytochrome c-552/4 CPU03_RS09165 a043675392d7d400c42c101e32391739 673 Gene3D G3DSA:1.10.1130.10 132 458 4.6E-30 T 29-03-2018 CPU03_RS09165 a043675392d7d400c42c101e32391739 673 Hamap MF_02023 Dissimilatory sulfite reductase. 4 672 52.456 T 29-03-2018 IPR032897 Dissimilatory sulfite reductase GO:0016002|GO:0020037|GO:0070814 CPU03_RS09165 a043675392d7d400c42c101e32391739 673 Gene3D G3DSA:1.20.140.10 555 673 1.9E-18 T 29-03-2018 CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 SUPERFAMILY SSF52821 2 101 1.03E-27 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 Gene3D G3DSA:3.40.250.10 1 108 3.4E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 SMART SM00450 7 102 1.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 Pfam PF00581 Rhodanese-like domain 9 98 1.6E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 ProSitePatterns PS00380 Rhodanese signature 1. 32 43 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CPU03_RS09010 a376ca02429bbdc190d5523dd5739ce9 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 29.635 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Gene3D G3DSA:3.40.50.300 9 90 9.8E-9 T 29-03-2018 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Gene3D G3DSA:3.40.50.300 292 543 1.4E-56 T 29-03-2018 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 SMART SM00382 344 522 5.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 SMART SM00382 28 230 6.3E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 SUPERFAMILY SSF52540 310 502 1.19E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Pfam PF12848 ABC transporter 224 297 3.4E-9 T 29-03-2018 IPR032781 ABC-transporter extension domain CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 SUPERFAMILY SSF52540 126 240 1.81E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 SUPERFAMILY SSF52540 3 94 1.81E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Pfam PF16326 ABC transporter C-terminal domain 562 630 8.2E-20 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Pfam PF00005 ABC transporter 19 185 2.6E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Pfam PF00005 ABC transporter 336 469 1.7E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 Gene3D G3DSA:3.40.50.300 91 291 9.3E-44 T 29-03-2018 CPU03_RS02110 0c75140c1c8034da117fb8154986ef2f 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 SUPERFAMILY SSF53383 130 562 4.66E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 6.8E-192 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 18 124 3.1E-23 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Gene3D G3DSA:3.90.1150.10 425 594 7.0E-57 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 SUPERFAMILY SSF55904 567 708 2.09E-41 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Gene3D G3DSA:3.90.100.10 595 713 5.4E-36 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Gene3D G3DSA:1.10.720.10 13 51 0.2 T 29-03-2018 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 PIRSF PIRSF009393 4 712 4.1E-282 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.2E-44 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 Gene3D G3DSA:3.40.640.10 130 424 8.9E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS10315 5995bba14eef073d53e6ee77b11d5119 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS15425 167aad5ed5bfa489eb1577375f227939 337 TIGRFAM TIGR03227 PhnS: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein 5 335 2.5E-150 T 29-03-2018 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter CPU03_RS15425 167aad5ed5bfa489eb1577375f227939 337 Pfam PF13343 Bacterial extracellular solute-binding protein 76 300 1.9E-26 T 29-03-2018 CPU03_RS15425 167aad5ed5bfa489eb1577375f227939 337 Gene3D G3DSA:3.40.190.10 24 167 2.1E-19 T 29-03-2018 CPU03_RS15425 167aad5ed5bfa489eb1577375f227939 337 Gene3D G3DSA:3.40.190.10 168 297 5.3E-7 T 29-03-2018 CPU03_RS15425 167aad5ed5bfa489eb1577375f227939 337 SUPERFAMILY SSF53850 25 331 3.36E-53 T 29-03-2018 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 5.2E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 Gene3D G3DSA:3.40.630.10 1 182 8.2E-29 T 29-03-2018 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 SUPERFAMILY SSF55031 181 295 2.54E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 65.247 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 4.9E-151 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 Pfam PF07687 Peptidase dimerisation domain 178 288 2.6E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 SUPERFAMILY SSF53187 2 180 4.57E-58 T 29-03-2018 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 SUPERFAMILY SSF53187 305 381 4.57E-58 T 29-03-2018 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 Gene3D G3DSA:3.30.70.360 183 297 1.2E-22 T 29-03-2018 CPU03_RS07820 6a5f4b819d05ee02e90c4593411fa153 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS00010 e2b87519e95f4561c439438944129694 106 PIRSF PIRSF029143 1 104 2.5E-45 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CPU03_RS00010 e2b87519e95f4561c439438944129694 106 Gene3D G3DSA:2.30.130.30 2 102 4.3E-19 T 29-03-2018 CPU03_RS00010 e2b87519e95f4561c439438944129694 106 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 29.778 T 29-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CPU03_RS00010 e2b87519e95f4561c439438944129694 106 SMART SM01022 5 103 2.1E-27 T 29-03-2018 IPR007374 ASCH domain CPU03_RS00010 e2b87519e95f4561c439438944129694 106 Pfam PF04266 ASCH domain 5 101 1.7E-18 T 29-03-2018 IPR007374 ASCH domain CPU03_RS00010 e2b87519e95f4561c439438944129694 106 SUPERFAMILY SSF88697 3 102 5.8E-32 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 4.8E-131 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 PIRSF PIRSF004532 1 332 6.7E-138 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 SUPERFAMILY SSF56655 1 325 1.04E-108 T 29-03-2018 CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 1.0E-175 T 29-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 Gene3D G3DSA:3.30.540.10 1 147 3.1E-60 T 29-03-2018 CPU03_RS08460 d4745f2329f230e2ce802fd785ba71c9 336 Gene3D G3DSA:3.30.540.10 152 336 5.0E-53 T 29-03-2018 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 29-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PIRSF PIRSF001480 1 391 1.8E-106 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 SUPERFAMILY SSF51182 1 381 5.42E-99 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 383 1.7E-110 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 Gene3D G3DSA:1.10.441.10 163 262 4.2E-27 T 29-03-2018 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 4.7E-68 T 29-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 Gene3D G3DSA:2.60.120.10 5 162 1.7E-52 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 Pfam PF01238 Phosphomannose isomerase type I 1 355 3.4E-96 T 29-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CPU03_RS16385 2186a10dee9fa23c4089ef83330407b0 392 Gene3D G3DSA:2.60.120.10 294 391 3.9E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 3.8E-98 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 Gene3D G3DSA:3.40.1180.10 2 246 5.4E-90 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 1.7E-78 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 SUPERFAMILY SSF64005 13 238 9.42E-86 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CPU03_RS04165 0f03fdd9f850e05299b2be214a34ed57 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.779 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CPU03_RS14535 37ee12126d182f0b943d34eadb896a90 365 Pfam PF00953 Glycosyl transferase family 4 70 230 1.5E-27 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CPU03_RS14535 37ee12126d182f0b943d34eadb896a90 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 350 24.152 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Gene3D G3DSA:2.150.10.10 20 105 0.0015 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 SUPERFAMILY SSF101967 97 254 3.47E-18 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 SUPERFAMILY SSF54523 300 389 2.2E-21 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 SUPERFAMILY SSF54523 242 250 2.2E-21 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Gene3D G3DSA:2.150.10.10 106 245 3.5E-24 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Pfam PF03895 YadA-like membrane anchor domain 331 389 4.2E-17 T 29-03-2018 IPR005594 YadA-like, C-terminal CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Gene3D G3DSA:1.20.5.170 246 319 1.9E-4 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Gene3D G3DSA:3.30.1300.30 320 389 3.2E-20 T 29-03-2018 CPU03_RS00615 a6c4f775fa2c49d701f92ef94d503312 390 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 231 256 3.6E-9 T 29-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 CPU03_RS00080 c972d5ae76a0fd839186c57047a9ff95 142 Gene3D G3DSA:4.10.1070.10 35 134 1.3E-16 T 29-03-2018 CPU03_RS00080 c972d5ae76a0fd839186c57047a9ff95 142 SUPERFAMILY SSF88874 16 141 3.79E-18 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 281 3.9E-111 T 29-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Pfam PF04055 Radical SAM superfamily 26 231 8.0E-20 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 SUPERFAMILY SSF54862 45 127 1.67E-14 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Gene3D G3DSA:3.30.70.20 79 108 2.3E-4 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Gene3D G3DSA:3.30.70.20 57 78 8.3E-9 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Gene3D G3DSA:3.30.70.20 31 56 0.024 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Gene3D G3DSA:3.80.30.10 112 282 2.8E-26 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 PIRSF PIRSF000371 1 287 4.1E-82 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 Pfam PF13353 4Fe-4S single cluster domain 17 184 4.9E-11 T 29-03-2018 CPU03_RS05425 94355c277a21f453603ed9374387fc32 287 SUPERFAMILY SSF102114 78 274 2.55E-14 T 29-03-2018 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.602 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 Gene3D G3DSA:3.40.50.1360 1 137 3.4E-41 T 29-03-2018 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 SUPERFAMILY SSF75445 127 198 5.36E-24 T 29-03-2018 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.5E-60 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 SUPERFAMILY SSF100950 1 146 2.3E-47 T 29-03-2018 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.9E-70 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CPU03_RS10565 32bc440ac8ddbe8182a815e6ebae5043 219 Gene3D G3DSA:3.30.70.260 138 196 3.3E-23 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 Gene3D G3DSA:1.20.1250.20 230 467 3.5E-30 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 Pfam PF07690 Major Facilitator Superfamily 2 387 1.2E-58 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 Gene3D G3DSA:1.20.1250.20 1 182 3.2E-34 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 336 356 1.7E-8 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 378 397 1.7E-8 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 58 80 1.7E-8 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 119 143 1.7E-8 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 245 270 1.7E-8 T 29-03-2018 CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 SUPERFAMILY SSF103473 433 457 1.29E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 SUPERFAMILY SSF103473 227 397 1.29E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16435 2317f64ae0127305de4134f76867119a 473 SUPERFAMILY SSF103473 2 184 1.29E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 SMART SM00525 186 206 3.4E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.4E-85 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 SUPERFAMILY SSF48150 3 208 1.04E-70 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 PIRSF PIRSF001435 1 210 8.4E-49 T 29-03-2018 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 Gene3D G3DSA:1.10.340.30 9 117 4.0E-23 T 29-03-2018 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.5E-7 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 Gene3D G3DSA:1.10.1670.10 118 213 6.8E-29 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 SMART SM00478 38 185 2.4E-55 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.0E-19 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CPU03_RS16320 febb344674eeb4808bdab70a065029cb 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.816 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.2E-156 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 Pfam PF01235 Sodium:alanine symporter family 48 449 1.3E-155 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 381 386 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS04975 4543b4eaf72e80be877b440fb65f7c6e 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.4E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 Gene3D G3DSA:3.30.930.10 2 207 1.2E-63 T 29-03-2018 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 162 8.4E-7 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 74 89 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 207 6.5E-75 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 Hamap MF_00013 Octanoyltransferase [lipB]. 8 209 37.575 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 SUPERFAMILY SSF55681 8 208 6.96E-70 T 29-03-2018 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 PIRSF PIRSF016262 4 218 1.8E-55 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CPU03_RS12185 cdef1bf282c664bd33e0a296bf028d72 222 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 131 2.0E-17 T 29-03-2018 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 SUPERFAMILY SSF55681 5 320 9.76E-105 T 29-03-2018 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 Gene3D G3DSA:3.30.930.10 2 322 3.6E-75 T 29-03-2018 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.589 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 PIRSF PIRSF001549 2 422 6.8E-127 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 5.5E-157 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 Pfam PF03129 Anticodon binding domain 330 419 1.4E-12 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 SUPERFAMILY SSF52954 329 423 1.8E-25 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 7.6E-47 T 29-03-2018 CPU03_RS11360 241a17585d56790e07c9b930cc49253f 424 Gene3D G3DSA:3.40.50.800 326 423 1.8E-19 T 29-03-2018 IPR004154 Anticodon-binding CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 Gene3D G3DSA:1.10.150.120 80 164 1.4E-32 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 Pfam PF01799 [2Fe-2S] binding domain 78 152 4.0E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 SUPERFAMILY SSF54292 8 93 4.46E-20 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 Gene3D G3DSA:3.10.20.30 4 79 2.4E-20 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 SUPERFAMILY SSF47741 89 159 3.27E-27 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CPU03_RS04880 e9cb3178be997c83b5a74fd81ad57931 164 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 57 3.5E-5 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 SUPERFAMILY SSF55874 289 453 1.7E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.1E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 SMART SM00387 345 455 1.3E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 158 4.6E-11 T 29-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Gene3D G3DSA:3.30.565.10 304 457 1.2E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 454 2.5E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Pfam PF00672 HAMP domain 184 233 3.5E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Gene3D G3DSA:1.10.287.130 228 296 2.1E-15 T 29-03-2018 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 SUPERFAMILY SSF47384 223 299 4.12E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 SMART SM00388 238 300 5.9E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 SMART SM00304 184 237 3.8E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08400 772001eb8b8c6a10ddb43fbefdd19bc1 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.0E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS15350 68c74cbaf45bcf4879070c0c322bfb15 212 SUPERFAMILY SSF56529 3 206 3.53E-54 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15350 68c74cbaf45bcf4879070c0c322bfb15 212 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 205 6.0E-42 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15350 68c74cbaf45bcf4879070c0c322bfb15 212 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 205 2.7E-79 T 29-03-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 CPU03_RS15350 68c74cbaf45bcf4879070c0c322bfb15 212 Gene3D G3DSA:3.90.850.10 2 212 1.1E-47 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 4.9E-33 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.9E-33 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.9E-33 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.9E-33 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 1.8E-239 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Gene3D G3DSA:1.20.200.10 138 415 8.2E-88 T 29-03-2018 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 SUPERFAMILY SSF48557 4 462 1.08E-155 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Gene3D G3DSA:1.10.275.10 2 137 2.9E-60 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Gene3D G3DSA:1.10.40.30 416 459 7.2E-24 T 29-03-2018 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Pfam PF10415 Fumarase C C-terminus 408 461 5.2E-24 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Pfam PF00206 Lyase 12 342 2.5E-116 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CPU03_RS15260 e386f78400b63788b8395ab5147386c4 466 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 89.545 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 SUPERFAMILY SSF52016 419 601 2.28E-58 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 Pfam PF00920 Dehydratase family 67 598 6.9E-160 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 SUPERFAMILY SSF143975 1 418 1.96E-146 T 29-03-2018 CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 601 0.0 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CPU03_RS01365 a7bf691b79a0e8a90e95177a5713d805 606 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Gene3D G3DSA:3.40.50.300 277 376 1.6E-22 T 29-03-2018 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 9.7E-72 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.8E-75 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Gene3D G3DSA:3.40.50.300 1 138 1.1E-25 T 29-03-2018 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Gene3D G3DSA:3.40.50.300 139 276 3.7E-28 T 29-03-2018 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Gene3D G3DSA:1.10.486.10 377 553 1.7E-37 T 29-03-2018 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.999 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 SUPERFAMILY SSF52540 2 636 1.78E-161 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07510 99899208e8c1362ec4d1c94ed766aa98 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 Gene3D G3DSA:1.10.10.10 75 166 3.2E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 Pfam PF08281 Sigma-70, region 4 105 156 2.5E-9 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 160 2.6E-19 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 SUPERFAMILY SSF88659 96 160 2.43E-10 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 SUPERFAMILY SSF88946 14 95 3.49E-14 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 Gene3D G3DSA:1.10.1740.10 8 74 2.9E-15 T 29-03-2018 CPU03_RS15645 84dfe18ef7b26fc3f111d140b54d5b1b 187 Pfam PF04542 Sigma-70 region 2 16 80 3.7E-10 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05245 61db18914727c87bf285d6387bd2171c 235 Gene3D G3DSA:3.20.20.70 1 229 3.0E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05245 61db18914727c87bf285d6387bd2171c 235 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.432 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CPU03_RS05245 61db18914727c87bf285d6387bd2171c 235 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 224 1.6E-85 T 29-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CPU03_RS05245 61db18914727c87bf285d6387bd2171c 235 SUPERFAMILY SSF51366 14 223 4.94E-54 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 PIRSF PIRSF001359 1 284 2.0E-105 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 4 283 2.1E-140 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 283 1.8E-94 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 Gene3D G3DSA:3.20.20.70 1 284 1.4E-101 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 SUPERFAMILY SSF51569 1 283 4.1E-94 T 29-03-2018 CPU03_RS04455 7bbff07c348d9c40e2cb49d6d35f2fc4 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.8E-99 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Pfam PF00158 Sigma-54 interaction domain 146 311 1.2E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 SUPERFAMILY SSF52172 4 188 1.99E-51 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 SMART SM00382 165 308 4.0E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 2.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 2.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Gene3D G3DSA:1.10.8.60 318 386 1.8E-26 T 29-03-2018 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 SUPERFAMILY SSF52540 146 387 1.38E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Gene3D G3DSA:3.40.50.300 132 317 2.2E-28 T 29-03-2018 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 SMART SM00448 5 116 2.7E-42 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Gene3D G3DSA:1.10.10.60 387 459 1.9E-16 T 29-03-2018 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Gene3D G3DSA:3.40.50.2300 2 131 2.6E-43 T 29-03-2018 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Pfam PF00072 Response regulator receiver domain 7 114 5.1E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 SUPERFAMILY SSF46689 358 456 1.52E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS14930 6f8dccb4eddf3ba6f220bc92df80ec01 460 Pfam PF02954 Bacterial regulatory protein, Fis family 417 453 1.4E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 Pfam PF06574 FAD synthetase 12 167 5.9E-54 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 Gene3D G3DSA:3.40.50.620 1 179 4.9E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 Gene3D G3DSA:2.40.30.30 180 314 2.2E-39 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 53 5.1E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 SUPERFAMILY SSF52374 16 176 5.91E-34 T 29-03-2018 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 PIRSF PIRSF004491 1 311 3.0E-100 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 SUPERFAMILY SSF82114 174 307 5.01E-44 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 Pfam PF01687 Riboflavin kinase 184 306 9.4E-38 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.9E-108 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CPU03_RS04910 1fd81c89b3677f8e6e8004ee32b4d969 320 SMART SM00904 183 307 1.7E-62 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CPU03_RS06735 1d2db7afcf703e1447499502ae73a2b9 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 174 9.8E-30 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CPU03_RS06735 1d2db7afcf703e1447499502ae73a2b9 175 SUPERFAMILY SSF49329 25 175 6.28E-47 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CPU03_RS06735 1d2db7afcf703e1447499502ae73a2b9 175 Gene3D G3DSA:2.60.40.200 21 175 2.4E-34 T 29-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CPU03_RS06735 1d2db7afcf703e1447499502ae73a2b9 175 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 163 174 - T 29-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 SUPERFAMILY SSF48452 142 255 4.64E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Gene3D G3DSA:1.20.5.730 36 101 8.7E-6 T 29-03-2018 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Gene3D G3DSA:1.25.40.10 139 190 1.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Gene3D G3DSA:1.25.40.10 191 225 2.8E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Pfam PF13174 Tetratricopeptide repeat 218 250 1.1E-5 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Pfam PF16331 TolA binding protein trimerisation 37 110 3.7E-25 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Gene3D G3DSA:1.25.40.10 226 260 4.6E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 260 1.7E-42 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Pfam PF13432 Tetratricopeptide repeat 154 214 8.9E-9 T 29-03-2018 CPU03_RS12600 9edf71f1eeea21e4fdb44e4b972f48b3 261 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 261 19.202 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 Pfam PF00297 Ribosomal protein L3 34 182 2.2E-15 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 SUPERFAMILY SSF50447 1 208 4.41E-80 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.161 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.0E-92 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site CPU03_RS09380 e9628b46cb6e6a69b6340ef3ad881b18 209 Gene3D G3DSA:4.10.960.10 57 165 1.3E-35 T 29-03-2018 CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SMART SM00491 542 674 2.6E-27 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 Pfam PF13307 Helicase C-terminal domain 533 685 1.5E-21 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SMART SM00487 23 300 0.0031 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 209 320 4.18E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 644 668 4.18E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 515 613 4.18E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 12 120 3.14E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 211 265 3.14E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SUPERFAMILY SSF52540 644 669 3.14E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 Pfam PF06733 DEAD_2 195 264 8.2E-7 T 29-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 SMART SM00488 18 294 0.0011 T 29-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CPU03_RS02500 67bd770667092ddb42e051ba8b42e9a0 723 Gene3D G3DSA:3.40.50.300 24 480 2.8E-27 T 29-03-2018 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 Gene3D G3DSA:3.40.30.10 3 161 2.7E-41 T 29-03-2018 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 5.9E-10 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 PIRSF PIRSF000239 1 199 2.0E-57 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 Pfam PF00578 AhpC/TSA family 5 139 1.1E-36 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 Gene3D G3DSA:3.30.1020.10 162 199 2.8E-13 T 29-03-2018 CPU03_RS03495 78ff0ae54a05089d236ed1f6520de466 200 SUPERFAMILY SSF52833 1 194 2.64E-67 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 5.9E-142 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 SUPERFAMILY SSF51726 2 352 1.64E-120 T 29-03-2018 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 Gene3D G3DSA:3.20.20.210 1 354 1.1E-110 T 29-03-2018 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.6E-136 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CPU03_RS07045 06054748ef11dc1bc36fc54aafbf3604 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.37 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 4.5E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 2.1E-81 T 29-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Gene3D G3DSA:3.30.70.20 20 80 4.3E-16 T 29-03-2018 CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0046 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Gene3D G3DSA:3.30.70.20 2 19 0.0047 T 29-03-2018 CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Gene3D G3DSA:3.30.70.20 119 201 3.3E-17 T 29-03-2018 CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 SUPERFAMILY SSF54862 3 192 1.67E-69 T 29-03-2018 CPU03_RS14160 18ed70c9773213fee44350fbf822309c 205 Gene3D G3DSA:3.30.70.20 81 118 5.1E-21 T 29-03-2018 CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 6.8E-47 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 Pfam PF02082 Transcriptional regulator 1 83 8.6E-28 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 Gene3D G3DSA:1.10.10.10 1 139 2.3E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 165 48.954 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.6E-67 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CPU03_RS11285 5af6052201a517853d53e5f5e5563910 165 SUPERFAMILY SSF46785 2 133 4.73E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 5.5E-37 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 Gene3D G3DSA:1.10.3860.10 2 408 2.1E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 426 38.127 T 29-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 Pfam PF00375 Sodium:dicarboxylate symporter family 9 400 2.6E-111 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS08715 995883e706ca4f4efb58c2b47e535d7a 426 SUPERFAMILY SSF118215 9 400 7.06E-121 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 121 503 1.0E-52 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 PIRSF PIRSF002741 1 593 1.2E-94 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 Gene3D G3DSA:3.40.190.10 208 320 2.3E-17 T 29-03-2018 CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 SUPERFAMILY SSF53850 54 589 3.8E-86 T 29-03-2018 CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 Gene3D G3DSA:3.10.105.10 321 561 1.0E-36 T 29-03-2018 CPU03_RS13665 954e9d8b542ae77f9111f3d5d1dc52bd 617 Gene3D G3DSA:3.90.76.10 68 207 1.6E-16 T 29-03-2018 CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 Gene3D G3DSA:3.30.1890.10 48 425 1.2E-67 T 29-03-2018 CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 SUPERFAMILY SSF52540 529 706 9.75E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 510 711 4.1E-50 T 29-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 450 2.8E-34 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 Pfam PF13614 AAA domain 541 655 5.6E-11 T 29-03-2018 IPR025669 AAA domain CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 Pfam PF02706 Chain length determinant protein 18 110 2.2E-21 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CPU03_RS14520 3fc5d0a2650f463938fa4511e2d35ac1 728 Gene3D G3DSA:3.40.50.300 504 723 1.5E-30 T 29-03-2018 CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 Gene3D G3DSA:1.10.10.10 3 84 2.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 SUPERFAMILY SSF53850 90 296 2.79E-41 T 29-03-2018 CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 Pfam PF03466 LysR substrate binding domain 89 290 1.6E-40 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 Gene3D G3DSA:3.40.190.10 177 263 3.2E-18 T 29-03-2018 CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 Gene3D G3DSA:3.40.190.10 92 176 5.7E-19 T 29-03-2018 CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 SUPERFAMILY SSF46785 4 109 3.58E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09925 bc439ced0ee97363880be32dcb357122 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 SUPERFAMILY SSF53187 5 204 6.29E-56 T 29-03-2018 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 SUPERFAMILY SSF53187 307 396 6.29E-56 T 29-03-2018 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 382 1.2E-76 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 Pfam PF01546 Peptidase family M20/M25/M40 75 385 2.0E-18 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 Pfam PF07687 Peptidase dimerisation domain 189 288 9.8E-9 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 PIRSF PIRSF005962 2 398 5.9E-96 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 SUPERFAMILY SSF55031 191 296 2.49E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS15680 d2d86817dcbe08e34cc997fe79583232 402 Gene3D G3DSA:3.40.630.10 2 288 1.9E-52 T 29-03-2018 CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 PIRSF PIRSF006276 1 142 2.6E-20 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 Pfam PF00582 Universal stress protein family 1 142 1.3E-25 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 PRINTS PR01438 Universal stress protein signature 2 20 5.2E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 PRINTS PR01438 Universal stress protein signature 103 115 5.2E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 PRINTS PR01438 Universal stress protein signature 120 142 5.2E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 SUPERFAMILY SSF52402 1 142 3.85E-28 T 29-03-2018 CPU03_RS08585 935078739412a514a123c8a1ecb2603a 142 Gene3D G3DSA:3.40.50.620 1 142 1.2E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 SUPERFAMILY SSF53850 109 314 5.97E-34 T 29-03-2018 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 Pfam PF03466 LysR substrate binding domain 116 312 1.1E-19 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 Gene3D G3DSA:3.40.190.10 200 287 1.7E-7 T 29-03-2018 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 64 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 64 75 1.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 SUPERFAMILY SSF46785 23 102 2.07E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 Gene3D G3DSA:1.10.10.10 21 103 2.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 85 3.6E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04740 9f812473a5c9763f28b82969dfafa197 321 Gene3D G3DSA:3.40.190.10 113 199 6.0E-8 T 29-03-2018 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 PIRSF PIRSF000463 6 735 2.5E-285 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Gene3D G3DSA:2.60.40.10 1 106 1.2E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Gene3D G3DSA:2.60.40.1180 623 724 2.8E-30 T 29-03-2018 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.464 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 723 6.1E-24 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Gene3D G3DSA:3.20.20.80 238 612 7.6E-77 T 29-03-2018 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 1.4E-300 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 SUPERFAMILY SSF81296 16 114 9.24E-19 T 29-03-2018 IPR014756 Immunoglobulin E-set CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 SMART SM00642 247 596 1.7E-7 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Gene3D G3DSA:2.60.40.10 112 223 3.3E-34 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 SUPERFAMILY SSF51011 624 725 3.72E-33 T 29-03-2018 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 4.4E-24 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 SUPERFAMILY SSF51445 235 620 7.41E-114 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 Pfam PF00128 Alpha amylase, catalytic domain 273 341 5.3E-9 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS09050 1768588fafaf72689e8fa4ee789ba8a7 736 SUPERFAMILY SSF81296 117 222 4.2E-34 T 29-03-2018 IPR014756 Immunoglobulin E-set CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 SUPERFAMILY SSF53067 66 111 1.45E-27 T 29-03-2018 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 SUPERFAMILY SSF53067 143 341 1.45E-27 T 29-03-2018 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 SUPERFAMILY SSF53067 5 36 1.45E-27 T 29-03-2018 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.334 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 Gene3D G3DSA:3.30.420.40 212 375 1.7E-31 T 29-03-2018 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 Gene3D G3DSA:3.30.420.40 3 180 2.9E-56 T 29-03-2018 CPU03_RS16285 af203368ae689c2ed2b3b03bd971902a 378 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 2.6E-170 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CPU03_RS02370 6082f30f8ced8e766c986ba245ca4e6f 270 Pfam PF00535 Glycosyl transferase family 2 12 155 9.0E-11 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS02370 6082f30f8ced8e766c986ba245ca4e6f 270 SUPERFAMILY SSF53448 16 228 1.88E-29 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02370 6082f30f8ced8e766c986ba245ca4e6f 270 Gene3D G3DSA:3.90.550.10 4 245 2.0E-24 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS10850 944afb4930d5a75c56122ac29bf7e3e4 147 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 14 144 7.0E-29 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CPU03_RS10850 944afb4930d5a75c56122ac29bf7e3e4 147 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 13 144 5.8E-52 T 29-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Pfam PF04408 Helicase associated domain (HA2) 460 550 2.8E-15 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 SMART SM00490 298 398 5.6E-15 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 SMART SM00847 458 552 6.7E-34 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 SMART SM00487 71 255 5.4E-24 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 SMART SM00382 88 378 2.9E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Gene3D G3DSA:3.40.50.300 249 416 1.5E-44 T 29-03-2018 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 615 691 2.6E-18 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 9 1289 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Pfam PF00271 Helicase conserved C-terminal domain 280 397 1.8E-10 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Gene3D G3DSA:3.40.50.300 72 231 2.2E-27 T 29-03-2018 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Pfam PF00270 DEAD/DEAH box helicase 84 229 1.5E-5 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 Pfam PF11898 Domain of unknown function (DUF3418) 706 1289 3.2E-234 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal CPU03_RS16600 0fcb4c8b8f449b1f20b54ef86afa9cae 1294 SUPERFAMILY SSF52540 72 594 1.82E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 468 2.6E-163 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 2.3E-59 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SMART SM00228 285 367 4.4E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SMART SM00228 392 462 2.3E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SUPERFAMILY SSF50156 267 376 1.48E-22 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Gene3D G3DSA:2.30.42.10 385 470 7.3E-15 T 29-03-2018 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Gene3D G3DSA:2.30.42.10 280 384 4.3E-26 T 29-03-2018 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SUPERFAMILY SSF50494 7 59 3.02E-64 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SUPERFAMILY SSF50494 107 294 3.02E-64 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Gene3D G3DSA:2.40.10.10 157 273 7.5E-43 T 29-03-2018 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 388 459 8.6E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 283 363 2.5E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 SUPERFAMILY SSF50156 395 467 2.89E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Pfam PF13365 Trypsin-like peptidase domain 110 246 5.1E-32 T 29-03-2018 CPU03_RS11520 b14fbfe2a3347cfb91e408b102510fc7 470 Gene3D G3DSA:2.40.10.10 27 156 9.2E-34 T 29-03-2018 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 Gene3D G3DSA:3.20.20.60 1 263 1.6E-84 T 29-03-2018 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.204 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 9.2E-108 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 SUPERFAMILY SSF51621 4 263 5.83E-105 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 PIRSF PIRSF000388 1 264 1.4E-98 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CPU03_RS04430 4bde9694b85e24856452299f3ac696ad 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 2.2E-117 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 SUPERFAMILY SSF46946 2 114 2.35E-45 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 PIRSF PIRSF002134 1 118 5.7E-41 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 Gene3D G3DSA:4.10.910.10 67 84 6.8E-17 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 Gene3D G3DSA:1.10.8.50 1 66 2.1E-22 T 29-03-2018 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 Gene3D G3DSA:4.10.910.10 85 118 4.1E-25 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 9.4E-53 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.847 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09490 591c06863f2c3bdc5ff0be2beff95d2b 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 9.7E-33 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09840 13b2bbec4b8f708ff8b8bd8205397f6a 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CPU03_RS09840 13b2bbec4b8f708ff8b8bd8205397f6a 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CPU03_RS09840 13b2bbec4b8f708ff8b8bd8205397f6a 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 8.4E-109 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS09840 13b2bbec4b8f708ff8b8bd8205397f6a 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 1.5E-232 T 29-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 CPU03_RS09840 13b2bbec4b8f708ff8b8bd8205397f6a 484 Pfam PF00474 Sodium:solute symporter family 36 432 2.4E-131 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS15790 8607b97f693cca70cb5532666196558f 93 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 9 84 1.8E-11 T 29-03-2018 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 PIRSF PIRSF037167 2 307 6.6E-149 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 2.6E-102 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.14 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 Gene3D G3DSA:1.10.8.10 14 101 1.4E-11 T 29-03-2018 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 SUPERFAMILY SSF53335 15 293 1.29E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.0E-138 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 Pfam PF05175 Methyltransferase small domain 134 216 2.5E-15 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CPU03_RS13075 01bbaac4456dda125ff9708891d69856 310 Gene3D G3DSA:3.40.50.150 102 273 4.3E-36 T 29-03-2018 CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 490 1.5E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 179 9.8E-14 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 Gene3D G3DSA:1.10.287.950 233 328 1.6E-4 T 29-03-2018 CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 SUPERFAMILY SSF58104 259 525 4.01E-53 T 29-03-2018 CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 Gene3D G3DSA:1.10.287.950 329 525 3.5E-38 T 29-03-2018 CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 Gene3D G3DSA:1.20.120.30 30 193 4.4E-7 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS10990 7e0d33912ce34be003276a4d2d935977 525 SMART SM00283 277 524 1.9E-59 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.5E-37 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.8E-26 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 Gene3D G3DSA:2.60.300.12 2 107 1.2E-37 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 39.381 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.1E-60 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CPU03_RS11300 ef4f7b7bd788c8fbbadccdbba1a07207 107 SUPERFAMILY SSF89360 1 96 1.44E-33 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 2.9E-218 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 Gene3D G3DSA:3.90.226.10 71 193 1.2E-8 T 29-03-2018 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 Gene3D G3DSA:3.40.1750.10 194 289 3.0E-22 T 29-03-2018 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 Gene3D G3DSA:3.90.226.10 318 611 5.3E-50 T 29-03-2018 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 Pfam PF01343 Peptidase family S49 140 274 1.7E-35 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 Pfam PF01343 Peptidase family S49 391 541 1.1E-46 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 PIRSF PIRSF001217 8 617 1.3E-212 T 29-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 SUPERFAMILY SSF52096 314 439 5.8E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 SUPERFAMILY SSF52096 467 529 5.8E-41 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 SUPERFAMILY SSF52096 36 180 1.15E-22 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 SUPERFAMILY SSF52096 211 286 1.15E-22 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS01140 0940f20bd1c281fb6629bcc3b2a4a053 617 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 1.1E-50 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CPU03_RS04655 bccb5476f1a52dc48fc82821292fcc08 287 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 29 258 24.586 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CPU03_RS04655 bccb5476f1a52dc48fc82821292fcc08 287 Pfam PF03799 Cell division protein FtsQ 133 250 3.1E-25 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB CPU03_RS04655 bccb5476f1a52dc48fc82821292fcc08 287 Pfam PF08478 POTRA domain, FtsQ-type 60 129 1.1E-21 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 SUPERFAMILY SSF52540 1 216 5.19E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 Pfam PF00005 ABC transporter 18 165 2.6E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 Gene3D G3DSA:3.40.50.300 1 223 4.9E-63 T 29-03-2018 CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 SMART SM00382 27 213 1.8E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08945 cdcb017afaa8ad44189f0ec48d7283ca 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.3E-94 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CPU03_RS16230 23c2ab06e053ac54c107b8d88b7de6bd 539 SUPERFAMILY SSF161098 284 525 2.75E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS16230 23c2ab06e053ac54c107b8d88b7de6bd 539 Gene3D G3DSA:1.10.3720.10 36 267 2.2E-20 T 29-03-2018 CPU03_RS16230 23c2ab06e053ac54c107b8d88b7de6bd 539 SUPERFAMILY SSF161098 5 259 2.51E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS16230 23c2ab06e053ac54c107b8d88b7de6bd 539 Gene3D G3DSA:1.10.3720.10 273 523 3.0E-18 T 29-03-2018 CPU03_RS01790 12ee1a1ffbffe9d4d7fd119293907b5b 296 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 238 6.9E-10 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CPU03_RS01790 12ee1a1ffbffe9d4d7fd119293907b5b 296 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CPU03_RS01790 12ee1a1ffbffe9d4d7fd119293907b5b 296 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 282 1.8E-116 T 29-03-2018 IPR022522 Flagellar motor stator, MotA CPU03_RS11720 7f704d8a0ef9caa439bd73fb04842a58 247 Gene3D G3DSA:3.40.50.150 13 242 6.8E-24 T 29-03-2018 CPU03_RS11720 7f704d8a0ef9caa439bd73fb04842a58 247 Pfam PF05175 Methyltransferase small domain 45 131 1.7E-10 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CPU03_RS11720 7f704d8a0ef9caa439bd73fb04842a58 247 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 247 53.171 T 29-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 CPU03_RS11720 7f704d8a0ef9caa439bd73fb04842a58 247 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS11720 7f704d8a0ef9caa439bd73fb04842a58 247 SUPERFAMILY SSF53335 37 190 9.1E-24 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 Gene3D G3DSA:3.30.70.360 179 278 3.1E-24 T 29-03-2018 CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 SUPERFAMILY SSF55031 175 282 2.22E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 SUPERFAMILY SSF53187 3 184 4.0E-46 T 29-03-2018 CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 SUPERFAMILY SSF53187 296 368 4.0E-46 T 29-03-2018 CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 Gene3D G3DSA:3.40.630.10 279 370 6.5E-11 T 29-03-2018 CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 Pfam PF07687 Peptidase dimerisation domain 173 272 3.6E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 Gene3D G3DSA:3.40.630.10 1 178 3.9E-21 T 29-03-2018 CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 PIRSF PIRSF037238 1 370 6.6E-138 T 29-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase CPU03_RS11820 8bc333acde0dc32e5426588c93f08f1e 370 Pfam PF01546 Peptidase family M20/M25/M40 71 367 4.2E-27 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 SUPERFAMILY SSF159664 224 349 3.27E-30 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 Pfam PF11760 Cobalamin synthesis G N-terminal 54 134 1.5E-34 T 29-03-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 SUPERFAMILY SSF159672 6 238 1.96E-57 T 29-03-2018 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 2.1E-22 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 Pfam PF11761 Cobalamin biosynthesis central region 140 216 2.6E-5 T 29-03-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CPU03_RS15055 7293e7d709ede432437dabdc7dc75866 351 Gene3D G3DSA:3.30.420.180 222 351 1.5E-26 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 3.2E-26 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.2E-26 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 3.2E-26 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.2E-26 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 PRINTS PR00446 Hydrogen uptake protein signature 67 83 3.2E-26 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 1.1E-49 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 4 152 6.7E-52 T 29-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 SUPERFAMILY SSF53163 1 157 7.06E-49 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 Pfam PF01750 Hydrogenase maturation protease 20 146 6.1E-39 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS13400 0ccc46d432858a82673c275d181273a9 164 Gene3D G3DSA:3.40.50.1450 1 161 5.6E-56 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1042 1077 2.5E-15 T 29-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 Gene3D G3DSA:2.40.50.140 33 124 1.7E-31 T 29-03-2018 CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.1E-169 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 Pfam PF10150 Ribonuclease E/G family 121 391 9.2E-92 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 SMART SM00316 37 119 4.0E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 Pfam PF00575 S1 RNA binding domain 36 118 3.1E-16 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 SUPERFAMILY SSF50249 40 124 1.24E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14545 4f6da1a2b400d2f8599fb2249c2047b6 1079 Hamap MF_00970 Ribonuclease E [rne]. 1 1066 37.669 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 110 137 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 6.2E-98 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 Gene3D G3DSA:3.40.50.1980 30 226 1.4E-84 T 29-03-2018 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 427 1.1E-160 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 SUPERFAMILY SSF53720 9 428 1.35E-86 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 PIRSF PIRSF000099 1 431 3.3E-162 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 Gene3D G3DSA:3.40.50.1980 227 372 3.2E-70 T 29-03-2018 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 Pfam PF00815 Histidinol dehydrogenase 29 428 2.2E-164 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS13815 9a0ac7102276dfc84941c59fec3a43dc 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 428 40.149 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CPU03_RS01555 8bcda31e486eacb91912e566cbfe08b8 392 SUPERFAMILY SSF53850 40 390 3.48E-40 T 29-03-2018 CPU03_RS01555 8bcda31e486eacb91912e566cbfe08b8 392 PIRSF PIRSF029172 6 392 2.3E-159 T 29-03-2018 IPR027020 Protein ynjB CPU03_RS01555 8bcda31e486eacb91912e566cbfe08b8 392 Pfam PF13416 Bacterial extracellular solute-binding protein 61 355 3.0E-25 T 29-03-2018 CPU03_RS01555 8bcda31e486eacb91912e566cbfe08b8 392 Gene3D G3DSA:3.40.190.10 28 173 8.0E-7 T 29-03-2018 CPU03_RS01555 8bcda31e486eacb91912e566cbfe08b8 392 Gene3D G3DSA:3.40.190.10 174 336 2.5E-20 T 29-03-2018 CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 SUPERFAMILY SSF51261 75 310 9.94E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 Pfam PF01476 LysM domain 75 117 2.2E-11 T 29-03-2018 IPR018392 LysM domain CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 Gene3D G3DSA:2.70.70.10 129 313 9.7E-41 T 29-03-2018 CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 SMART SM00257 74 118 4.0E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 Pfam PF01551 Peptidase family M23 213 306 4.6E-32 T 29-03-2018 IPR016047 Peptidase M23 CPU03_RS10965 a4560446418869345c858f213f87bc8f 313 Gene3D G3DSA:3.10.350.10 68 121 9.2E-10 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.0E-40 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Pfam PF02142 MGS-like domain 957 1041 4.6E-18 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 8.1E-38 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-77 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.231 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.30.1490.20 656 745 7.1E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.2E-65 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.30.470.20 119 403 7.6E-68 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF56059 674 934 1.94E-104 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF52440 1 127 1.06E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF56059 128 401 2.47E-112 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF52335 938 1071 1.57E-34 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.40.50.20 539 655 9.7E-63 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SMART SM01096 424 547 6.7E-75 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.406 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF52440 557 676 2.45E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SMART SM00851 956 1042 1.3E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.30.470.20 746 927 1.7E-44 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:1.10.1030.10 404 538 2.6E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 SUPERFAMILY SSF48108 396 554 6.02E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.40.50.20 4 109 3.6E-40 T 29-03-2018 CPU03_RS04855 14a7e6fe5d9f82abc100be0abeabb3d4 1073 Gene3D G3DSA:3.40.50.1380 928 1055 3.4E-29 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 146 8.9E-25 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Gene3D G3DSA:3.30.230.40 171 257 3.9E-32 T 29-03-2018 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 359 50.114 T 29-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Pfam PF13242 HAD-hyrolase-like 102 144 1.2E-5 T 29-03-2018 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 SUPERFAMILY SSF56784 2 146 4.2E-36 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 166 6.6E-70 T 29-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 230 243 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 6.2E-44 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Gene3D G3DSA:3.30.230.40 259 359 3.6E-33 T 29-03-2018 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 SUPERFAMILY SSF54211 171 255 1.39E-29 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Gene3D G3DSA:3.40.50.1000 3 156 5.2E-22 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 200 341 1.3E-66 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 323 335 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 171 359 38.235 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CPU03_RS13805 7c9bbdc8c6aa633bbdc387e77fe5dab2 359 SUPERFAMILY SSF54211 256 346 1.9E-33 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Pfam PF17137 Domain of unknown function (DUF5110) 700 768 9.8E-9 T 29-03-2018 IPR033403 Domain of unknown function DUF5110 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Gene3D G3DSA:2.60.40.1760 8 243 1.8E-43 T 29-03-2018 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 SUPERFAMILY SSF74650 2 243 2.42E-46 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 SUPERFAMILY SSF51445 247 594 2.81E-69 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Pfam PF01055 Glycosyl hydrolases family 31 238 681 7.9E-116 T 29-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 SUPERFAMILY SSF51011 597 678 4.68E-19 T 29-03-2018 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Gene3D G3DSA:2.60.40.1180 680 781 1.6E-9 T 29-03-2018 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Gene3D G3DSA:3.20.20.80 244 616 2.9E-104 T 29-03-2018 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Gene3D G3DSA:2.60.40.1180 617 679 8.4E-22 T 29-03-2018 CPU03_RS10250 5c54e645ccdab27aff36daf5b9642ba2 788 Pfam PF13802 Galactose mutarotase-like 146 213 1.2E-22 T 29-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 9 74 1.1E-11 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 2.7E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 Gene3D G3DSA:3.40.30.10 1 97 1.1E-20 T 29-03-2018 CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 Gene3D G3DSA:1.20.1050.10 98 200 3.2E-27 T 29-03-2018 CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 SUPERFAMILY SSF52833 1 84 2.52E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS16310 14bbd8d57223fb369ec96fecb10c5cf5 201 SUPERFAMILY SSF47616 82 198 3.48E-30 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.4E-259 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.301 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 SUPERFAMILY SSF52016 421 611 7.53E-60 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 Pfam PF00920 Dehydratase family 34 607 3.5E-219 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 SUPERFAMILY SSF143975 3 420 2.09E-133 T 29-03-2018 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 Gene3D G3DSA:3.40.50.2300 59 172 4.7E-4 T 29-03-2018 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS07535 c2a71ec8df75263910924f4512fd72a6 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CPU03_RS02495 da2702bddc4b9b890dee2dcbcc7008d6 354 SUPERFAMILY SSF160355 43 307 2.09E-61 T 29-03-2018 CPU03_RS02495 da2702bddc4b9b890dee2dcbcc7008d6 354 Gene3D G3DSA:3.30.1890.10 31 192 7.0E-27 T 29-03-2018 CPU03_RS02495 da2702bddc4b9b890dee2dcbcc7008d6 354 Pfam PF02706 Chain length determinant protein 4 100 1.7E-13 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CPU03_RS02495 da2702bddc4b9b890dee2dcbcc7008d6 354 Gene3D G3DSA:1.10.287.210 193 290 6.3E-21 T 29-03-2018 CPU03_RS00325 7f1bb516551c19ee24c8990ff9507f88 75 Gene3D G3DSA:1.10.260.40 1 72 5.9E-12 T 29-03-2018 CPU03_RS00325 7f1bb516551c19ee24c8990ff9507f88 75 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.6E-23 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS00325 7f1bb516551c19ee24c8990ff9507f88 75 SMART SM00530 6 62 1.0E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS00325 7f1bb516551c19ee24c8990ff9507f88 75 SUPERFAMILY SSF47413 1 68 1.32E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 ProSitePatterns PS00769 Transthyretin signature 2. 124 136 - T 29-03-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 PRINTS PR00189 Transthyretin signature 63 88 2.9E-8 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 PRINTS PR00189 Transthyretin signature 119 141 2.9E-8 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 PRINTS PR00189 Transthyretin signature 31 51 2.9E-8 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 30 141 1.1E-40 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 Pfam PF00576 HIUase/Transthyretin family 32 140 2.1E-34 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 Gene3D G3DSA:2.60.40.180 26 141 3.3E-39 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS03700 393a9cd3dc81695af02b5275b19620bb 141 SUPERFAMILY SSF49472 26 141 1.09E-37 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 Gene3D G3DSA:2.40.50.100 240 293 8.2E-11 T 29-03-2018 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 Gene3D G3DSA:3.40.50.300 1 239 4.8E-70 T 29-03-2018 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 Pfam PF00005 ABC transporter 21 161 9.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 SUPERFAMILY SSF52540 4 243 1.6E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 Gene3D G3DSA:2.40.50.140 294 346 1.2E-10 T 29-03-2018 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 Pfam PF08402 TOBE domain 281 353 2.3E-13 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 SMART SM00382 28 219 2.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 SUPERFAMILY SSF50331 236 364 6.07E-32 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS06890 5da36faa3a69a8e5ed1c9f23d17f1f22 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Pfam PF13247 4Fe-4S dicluster domain 117 199 2.0E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Gene3D G3DSA:3.30.70.20 73 128 6.1E-9 T 29-03-2018 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Gene3D G3DSA:3.30.70.20 161 184 3.2E-11 T 29-03-2018 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Gene3D G3DSA:3.30.70.20 129 160 8.7E-10 T 29-03-2018 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Pfam PF12800 4Fe-4S binding domain 67 78 0.054 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Gene3D G3DSA:3.30.70.20 41 72 0.021 T 29-03-2018 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 Gene3D G3DSA:3.30.70.20 185 208 1.1E-4 T 29-03-2018 CPU03_RS02770 3f24732c053d0b2b34f968956afe4ed0 208 SUPERFAMILY SSF54862 65 201 1.93E-35 T 29-03-2018 CPU03_RS05655 36605e863995c98f96ed697326cf8973 113 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 49 107 6.1E-11 T 29-03-2018 CPU03_RS05655 36605e863995c98f96ed697326cf8973 113 Gene3D G3DSA:3.30.1380.10 5 107 3.1E-9 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS05655 36605e863995c98f96ed697326cf8973 113 SUPERFAMILY SSF55166 13 107 2.08E-15 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS07075 bbc27399a71387112905c3d05f2970e5 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.543 T 29-03-2018 IPR022973 Ribosomal protein L10 CPU03_RS07075 bbc27399a71387112905c3d05f2970e5 165 Pfam PF00466 Ribosomal protein L10 5 101 1.0E-25 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CPU03_RS07075 bbc27399a71387112905c3d05f2970e5 165 SUPERFAMILY SSF160369 4 162 4.18E-48 T 29-03-2018 CPU03_RS07075 bbc27399a71387112905c3d05f2970e5 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS10365 c2915f42e999cbb42f7454b66092240a 512 PIRSF PIRSF006446 1 332 3.9E-118 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS10365 c2915f42e999cbb42f7454b66092240a 512 PIRSF PIRSF006446 355 512 4.8E-33 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS10365 c2915f42e999cbb42f7454b66092240a 512 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.9E-174 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Gene3D G3DSA:3.30.450.20 41 173 3.6E-22 T 29-03-2018 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Gene3D G3DSA:1.10.287.130 332 371 1.3E-14 T 29-03-2018 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Gene3D G3DSA:3.30.565.10 372 547 4.9E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 541 5.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Pfam PF17203 Single cache domain 3 56 173 1.9E-17 T 29-03-2018 IPR033463 Single cache domain 3 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SUPERFAMILY SSF55874 405 541 2.88E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 2.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 2.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 2.0E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SUPERFAMILY SSF103190 47 179 2.0E-31 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SMART SM00091 222 292 1.4E-7 T 29-03-2018 IPR000014 PAS domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SUPERFAMILY SSF55785 223 312 1.24E-8 T 29-03-2018 IPR000014 PAS domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 332 383 2.8E-8 T 29-03-2018 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SUPERFAMILY SSF55890 335 383 5.62E-9 T 29-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Pfam PF00989 PAS fold 224 285 1.2E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 SMART SM00387 430 543 2.1E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06815 6e3812bdf50bdf224a07ffd0b573c4aa 547 Gene3D G3DSA:3.30.450.20 213 331 1.1E-9 T 29-03-2018 CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 Gene3D G3DSA:3.30.70.20 66 388 6.7E-4 T 29-03-2018 CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 Pfam PF13183 4Fe-4S dicluster domain 7 71 7.5E-10 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 4 396 1.5E-226 T 29-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 Gene3D G3DSA:3.30.70.20 5 65 3.4E-8 T 29-03-2018 CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 Pfam PF02754 Cysteine-rich domain 164 250 8.6E-14 T 29-03-2018 IPR004017 Cysteine-rich domain CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 Pfam PF02754 Cysteine-rich domain 294 377 1.2E-13 T 29-03-2018 IPR004017 Cysteine-rich domain CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 SUPERFAMILY SSF46548 7 82 4.53E-15 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS10005 d5c0c4908b347ed4a61d6a4b454f3ab1 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 Gene3D G3DSA:3.20.130.10 359 536 1.3E-66 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 325 1.1E-32 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 PIRSF PIRSF001394 30 548 2.3E-231 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 8.3E-87 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.0E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 Pfam PF05683 Fumarase C-terminus 332 537 1.5E-92 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CPU03_RS14480 bad79ca263ff384da0c882b62e961fb1 548 SUPERFAMILY SSF117457 361 536 3.27E-61 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CPU03_RS16480 0af9c2e527b9fe52ffbbacacf76b971c 192 PIRSF PIRSF004982 3 189 1.4E-47 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS16480 0af9c2e527b9fe52ffbbacacf76b971c 192 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 13 181 1.1E-55 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS16480 0af9c2e527b9fe52ffbbacacf76b971c 192 Pfam PF03843 Outer membrane lipoprotein Slp family 18 152 5.4E-44 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 SMART SM00870 25 342 6.9E-151 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 SUPERFAMILY SSF53774 24 347 3.01E-110 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 1.7E-163 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 Pfam PF00710 Asparaginase, N-terminal 26 216 2.1E-63 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.5E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 3.5E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.5E-23 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 Gene3D G3DSA:3.40.50.40 235 347 1.1E-31 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 PIRSF PIRSF001220 20 348 1.1E-96 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 Gene3D G3DSA:3.40.50.1170 21 231 2.1E-64 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CPU03_RS14235 e12853ed058dfce9cb7caae59b5bc806 348 PIRSF PIRSF500176 22 348 1.9E-85 T 29-03-2018 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 527 647 1.1E-47 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 526 650 2.2E-47 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 Pfam PF02378 Phosphotransferase system, EIIC 12 324 1.4E-77 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 SUPERFAMILY SSF55604 418 492 6.28E-18 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 Gene3D G3DSA:3.30.1360.60 417 492 5.5E-23 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 589 601 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 479 9.6E-19 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 432 449 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 Gene3D G3DSA:2.70.70.10 515 674 4.7E-54 T 29-03-2018 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 Pfam PF00367 phosphotransferase system, EIIB 421 454 4.2E-12 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 SUPERFAMILY SSF51261 525 671 1.17E-51 T 29-03-2018 IPR011055 Duplicated hybrid motif CPU03_RS12375 ca28ed50db0ad5a4dc5072e36c5082f0 675 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 490 8.1E-205 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CPU03_RS12585 6d19d159c898905670833b4a95366836 398 TIGRFAM TIGR02794 tolA_full: protein TolA 13 397 3.8E-90 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CPU03_RS12585 6d19d159c898905670833b4a95366836 398 Pfam PF06519 TolA C-terminal 302 395 2.0E-33 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CPU03_RS12585 6d19d159c898905670833b4a95366836 398 SUPERFAMILY SSF74653 310 398 5.89E-22 T 29-03-2018 CPU03_RS12585 6d19d159c898905670833b4a95366836 398 Gene3D G3DSA:3.30.1150.10 320 392 1.7E-20 T 29-03-2018 CPU03_RS15550 ef40cb5f22758203c96da523cd19187d 456 SUPERFAMILY SSF48452 87 152 4.69E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS15550 ef40cb5f22758203c96da523cd19187d 456 Gene3D G3DSA:1.25.40.10 85 167 6.9E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS15550 ef40cb5f22758203c96da523cd19187d 456 Pfam PF04575 Protein of unknown function (DUF560) 171 456 1.4E-78 T 29-03-2018 IPR007655 Protein of unknown function DUF560 CPU03_RS15550 ef40cb5f22758203c96da523cd19187d 456 Gene3D G3DSA:2.40.160.20 168 337 3.8E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS15550 ef40cb5f22758203c96da523cd19187d 456 Pfam PF13432 Tetratricopeptide repeat 92 149 7.3E-8 T 29-03-2018 CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 Gene3D G3DSA:1.10.10.10 125 229 6.7E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 SUPERFAMILY SSF52172 4 172 1.32E-38 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 SMART SM00862 151 227 1.5E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 SMART SM00448 6 116 4.0E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 Pfam PF00072 Response regulator receiver domain 8 117 1.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 Gene3D G3DSA:3.40.50.2300 1 124 2.9E-35 T 29-03-2018 CPU03_RS12430 60e81309219cfba3bba8c6d622a68928 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.2E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 Gene3D G3DSA:1.10.443.10 180 365 8.8E-23 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 SUPERFAMILY SSF54171 13 58 1.05E-5 T 29-03-2018 IPR016177 DNA-binding domain GO:0003677 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 Pfam PF00589 Phage integrase family 203 355 2.5E-21 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 SUPERFAMILY SSF56349 72 360 3.77E-50 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 2 59 2.1E-9 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 Gene3D G3DSA:1.10.150.130 68 179 9.5E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS15780 a7173451daae0bbe9ef85664b75bf255 378 Gene3D G3DSA:3.30.160.60 5 59 3.8E-11 T 29-03-2018 CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 132 1.2E-54 T 29-03-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 SMART SM00347 22 122 2.8E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 Pfam PF01047 MarR family 29 86 6.5E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 Gene3D G3DSA:1.10.10.10 1 150 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15345 79c24bd228076ac8086c6e05769eda88 157 SUPERFAMILY SSF46785 3 135 5.92E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15145 320e699f9410fc15c08662130ff25b0f 265 Gene3D G3DSA:3.20.20.60 5 259 5.2E-40 T 29-03-2018 CPU03_RS15145 320e699f9410fc15c08662130ff25b0f 265 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 23 218 6.8E-27 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CPU03_RS15145 320e699f9410fc15c08662130ff25b0f 265 SUPERFAMILY SSF51621 8 248 4.71E-65 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 Gene3D G3DSA:3.40.190.10 92 181 1.5E-10 T 29-03-2018 CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 Gene3D G3DSA:3.40.190.10 182 258 5.4E-9 T 29-03-2018 CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 Pfam PF03466 LysR substrate binding domain 95 289 2.6E-21 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 Gene3D G3DSA:1.10.10.10 1 85 5.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 SUPERFAMILY SSF53850 90 290 8.14E-24 T 29-03-2018 CPU03_RS12855 e77c094d2c7ea23b1c7e50ed5d5268dc 300 SUPERFAMILY SSF46785 2 82 2.04E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Gene3D G3DSA:2.160.10.10 136 312 3.3E-43 T 29-03-2018 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.174 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 SUPERFAMILY SSF51161 33 316 7.0E-84 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.7E-123 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Gene3D G3DSA:2.160.10.10 76 135 1.6E-12 T 29-03-2018 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 89 2.6E-23 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 4.4E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 1.6E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS04140 3936ced322fa97820194fe2f16850a95 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 144 1.8E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 Pfam PF12848 ABC transporter 224 309 2.1E-20 T 29-03-2018 IPR032781 ABC-transporter extension domain CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 SUPERFAMILY SSF52540 6 237 7.96E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 Gene3D G3DSA:3.40.50.300 3 282 2.2E-51 T 29-03-2018 CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 SMART SM00382 344 512 3.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 SMART SM00382 26 228 6.3E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 Pfam PF00005 ABC transporter 337 467 3.9E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 Pfam PF00005 ABC transporter 18 184 1.4E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 SUPERFAMILY SSF52540 300 523 3.39E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12860 8c8ea1b9eef0cf796c2c57f3e59a9213 531 Gene3D G3DSA:3.40.50.300 283 531 7.6E-48 T 29-03-2018 CPU03_RS16075 407f2904b867066dcfbaf582dabf55aa 2609 Gene3D G3DSA:3.40.50.2020 1065 1240 1.2E-4 T 29-03-2018 CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.2E-30 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.392 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 SUPERFAMILY SSF52080 4 143 3.14E-46 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.3E-51 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09475 602c105fec1cf4895de3d9a9e48cd173 144 Gene3D G3DSA:3.100.10.10 42 144 7.1E-24 T 29-03-2018 CPU03_RS16160 ddae980329eab676293fd8499c48372f 295 Pfam PF01435 Peptidase family M48 74 290 1.5E-38 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CPU03_RS16160 ddae980329eab676293fd8499c48372f 295 Hamap MF_00188 Protease HtpX [htpX]. 1 291 26.456 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CPU03_RS16160 ddae980329eab676293fd8499c48372f 295 Gene3D G3DSA:3.30.2010.10 64 157 9.4E-22 T 29-03-2018 CPU03_RS13955 ef028ca3b98bab10bce24ff2703b763c 222 Gene3D G3DSA:1.10.3720.10 1 221 1.2E-31 T 29-03-2018 CPU03_RS13955 ef028ca3b98bab10bce24ff2703b763c 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 5.3E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CPU03_RS13955 ef028ca3b98bab10bce24ff2703b763c 222 SUPERFAMILY SSF161098 6 200 9.94E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13955 ef028ca3b98bab10bce24ff2703b763c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 215 2.7E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 SUPERFAMILY SSF52096 22 204 6.12E-75 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 PRINTS PR00127 Clp protease catalytic subunit P signature 180 199 3.1E-53 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 PRINTS PR00127 Clp protease catalytic subunit P signature 123 142 3.1E-53 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 PRINTS PR00127 Clp protease catalytic subunit P signature 102 119 3.1E-53 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 PRINTS PR00127 Clp protease catalytic subunit P signature 31 46 3.1E-53 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 PRINTS PR00127 Clp protease catalytic subunit P signature 71 91 3.1E-53 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 124 137 - T 29-03-2018 IPR033135 ClpP, histidine active site CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 Gene3D G3DSA:3.90.226.10 14 206 4.2E-47 T 29-03-2018 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 Pfam PF00574 Clp protease 24 204 6.6E-90 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 15 205 44.11 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 13 203 5.5E-109 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CPU03_RS03345 4b68bd7d06107bb2c9f6be8fdba7bb05 206 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 102 113 - T 29-03-2018 IPR018215 ClpP, Ser active site CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 SUPERFAMILY SSF52540 480 644 6.58E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 SUPERFAMILY SSF52540 273 337 6.58E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Gene3D G3DSA:3.40.50.10810 128 379 4.4E-27 T 29-03-2018 CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 2.2E-16 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.2E-157 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Gene3D G3DSA:3.40.50.300 483 639 1.1E-23 T 29-03-2018 CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Pfam PF00176 SNF2 family N-terminal domain 174 442 5.7E-20 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.13 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 SUPERFAMILY SSF52540 131 377 2.3E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 SMART SM00487 150 342 1.3E-21 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 SMART SM00490 517 601 1.6E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS04795 44732d0968f75e78ac134d954b2ba977 968 Gene3D G3DSA:3.90.550.10 640 764 0.37 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.0E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 Gene3D G3DSA:1.10.10.10 2 84 3.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 Gene3D G3DSA:3.40.190.10 90 181 2.8E-11 T 29-03-2018 CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 Gene3D G3DSA:3.40.190.10 182 263 5.4E-6 T 29-03-2018 CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 SUPERFAMILY SSF53850 89 290 2.9E-26 T 29-03-2018 CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 SUPERFAMILY SSF46785 3 111 5.44E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15220 6297b69ed1c294ccda71d8c36f0df60c 302 Pfam PF03466 LysR substrate binding domain 89 287 4.3E-23 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 TIGRFAM TIGR01089 fucI: L-fucose isomerase 6 591 0.0 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Gene3D G3DSA:3.40.275.10 178 340 4.7E-59 T 29-03-2018 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Pfam PF07882 L-fucose isomerase, second N-terminal domain 176 355 3.7E-81 T 29-03-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Pfam PF07881 L-fucose isomerase, first N-terminal domain 8 175 1.7E-81 T 29-03-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Gene3D G3DSA:3.20.14.10 342 590 5.6E-119 T 29-03-2018 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Gene3D G3DSA:3.40.50.1070 6 176 9.6E-69 T 29-03-2018 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 SUPERFAMILY SSF50443 357 591 1.1E-126 T 29-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Pfam PF02952 L-fucose isomerase, C-terminal domain 391 555 1.4E-55 T 29-03-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 Hamap MF_01254 L-fucose isomerase [fucI]. 4 592 70.418 T 29-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CPU03_RS06540 0518c720994f242654fea61c630d6f7f 593 SUPERFAMILY SSF53743 4 356 5.62E-147 T 29-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CPU03_RS07450 2e740487b0cffca8c4b78f6b1597fa76 231 SUPERFAMILY SSF55729 44 226 1.21E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS07450 2e740487b0cffca8c4b78f6b1597fa76 231 Pfam PF00583 Acetyltransferase (GNAT) family 135 219 2.4E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS07450 2e740487b0cffca8c4b78f6b1597fa76 231 Gene3D G3DSA:3.40.630.30 77 231 1.5E-22 T 29-03-2018 CPU03_RS07450 2e740487b0cffca8c4b78f6b1597fa76 231 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 231 4.7E-75 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CPU03_RS07450 2e740487b0cffca8c4b78f6b1597fa76 231 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 231 43.561 T 29-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 PRINTS PR00160 Glutaredoxin signature 214 227 4.0E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 PRINTS PR00160 Glutaredoxin signature 228 241 4.0E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 PRINTS PR00160 Glutaredoxin signature 173 191 4.0E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 Pfam PF08534 Redoxin 5 160 3.1E-28 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.1E-34 T 29-03-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 SUPERFAMILY SSF52833 3 241 1.05E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 Pfam PF00462 Glutaredoxin 173 231 1.9E-18 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 Gene3D G3DSA:3.40.30.10 172 242 6.5E-22 T 29-03-2018 CPU03_RS07790 c6f6c57b9e7a399c536d4c545796cf48 242 Gene3D G3DSA:3.40.30.10 3 163 4.4E-25 T 29-03-2018 CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 4.8E-123 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 6.3E-7 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 SMART SM00382 28 231 7.1E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 Gene3D G3DSA:3.40.50.300 2 238 5.7E-64 T 29-03-2018 CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 SUPERFAMILY SSF52540 4 237 1.27E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05355 ff09b7e2ad4b8525eab400327ee25f7f 241 Pfam PF00005 ABC transporter 20 166 5.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.3E-138 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.2E-58 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 Hamap MF_00318 Enolase [eno]. 2 417 43.981 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 SUPERFAMILY SSF51604 143 428 6.93E-125 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 Gene3D G3DSA:3.20.20.120 128 432 6.1E-101 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 SMART SM01193 4 134 2.5E-94 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 Gene3D G3DSA:3.30.390.10 3 127 5.7E-52 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 SMART SM01192 143 431 2.3E-210 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 SUPERFAMILY SSF54826 3 138 1.38E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PIRSF PIRSF001400 1 430 1.9E-191 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 5.5E-207 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS11810 922afa8387585b98f1b27b01297401a9 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS04120 f63152b1abfd2ff6f0846cabcdee6c45 197 Gene3D G3DSA:3.30.420.10 6 197 9.7E-68 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS04120 f63152b1abfd2ff6f0846cabcdee6c45 197 SUPERFAMILY SSF53098 6 196 5.16E-68 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS04120 f63152b1abfd2ff6f0846cabcdee6c45 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 38.81 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 CPU03_RS04120 f63152b1abfd2ff6f0846cabcdee6c45 197 Pfam PF01351 Ribonuclease HII 14 190 2.6E-37 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain CPU03_RS15685 5e187790b6204f439a719d2758b3ef23 502 Pfam PF03806 AbgT putative transporter family 7 498 2.1E-138 T 29-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 SUPERFAMILY SSF52218 1 148 4.19E-38 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 Gene3D G3DSA:3.40.50.360 1 150 2.6E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 PRINTS PR00369 Flavodoxin signature 108 127 1.2E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 PRINTS PR00369 Flavodoxin signature 53 64 1.2E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 PRINTS PR00369 Flavodoxin signature 84 94 1.2E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS04215 b637444548b58953f9ee34d43c39b75f 150 Pfam PF00258 Flavodoxin 6 134 9.1E-23 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.62 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 1.4E-240 T 29-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 SMART SM00917 370 501 8.1E-35 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 SUPERFAMILY SSF110921 392 500 3.53E-25 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 Pfam PF00682 HMGL-like 4 273 5.1E-103 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 1.9E-34 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 Gene3D G3DSA:3.20.20.70 1 360 1.1E-106 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CPU03_RS04745 78196ee6492d7aff77e79669a7cd281f 528 SUPERFAMILY SSF51569 1 291 6.04E-97 T 29-03-2018 CPU03_RS03250 4f6688098202d2744459981b2b74dc79 394 SUPERFAMILY SSF111369 52 300 8.11E-87 T 29-03-2018 CPU03_RS03250 4f6688098202d2744459981b2b74dc79 394 Gene3D G3DSA:1.20.1600.10 25 345 1.1E-29 T 29-03-2018 CPU03_RS03250 4f6688098202d2744459981b2b74dc79 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 1.1E-83 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS03250 4f6688098202d2744459981b2b74dc79 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 293 6.0E-12 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CPU03_RS03250 4f6688098202d2744459981b2b74dc79 394 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 7.6E-11 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 2.2E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 2.2E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 2.2E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 Pfam PF01252 Signal peptidase (SPase) II 16 155 3.9E-35 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.625 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS04900 cd0aec1d104cb46f6b2af26b2ff304cc 165 TIGRFAM TIGR00077 lspA: signal peptidase II 5 164 6.0E-55 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CPU03_RS13780 fe2cb921abcdcb2b4008d0b4430c8c31 386 SUPERFAMILY SSF48695 13 182 1.14E-46 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS13780 fe2cb921abcdcb2b4008d0b4430c8c31 386 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 180 1.4E-66 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CPU03_RS13780 fe2cb921abcdcb2b4008d0b4430c8c31 386 PIRSF PIRSF000014 4 382 1.7E-140 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CPU03_RS13780 fe2cb921abcdcb2b4008d0b4430c8c31 386 Gene3D G3DSA:3.90.10.10 42 384 1.6E-28 T 29-03-2018 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Gene3D G3DSA:3.30.310.50 443 546 5.1E-19 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 SUPERFAMILY SSF55957 433 543 2.49E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 SUPERFAMILY SSF53738 25 235 1.48E-52 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Gene3D G3DSA:3.40.120.10 332 441 2.8E-26 T 29-03-2018 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 29-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 2.1E-38 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 481 538 1.1E-7 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 SUPERFAMILY SSF53738 209 317 2.12E-9 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 5.6E-29 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Gene3D G3DSA:3.40.120.10 12 213 3.5E-50 T 29-03-2018 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Gene3D G3DSA:3.40.120.10 214 331 1.0E-23 T 29-03-2018 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 SUPERFAMILY SSF53738 305 446 7.06E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS12425 101640e4c49084408205ee7dbbb450c5 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.6E-19 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06110 bc8b4ad4db2fbdb9d15f97f7d1aace8d 323 SUPERFAMILY SSF48576 5 322 8.96E-99 T 29-03-2018 IPR008949 Isoprenoid synthase domain CPU03_RS06110 bc8b4ad4db2fbdb9d15f97f7d1aace8d 323 Pfam PF00348 Polyprenyl synthetase 31 263 3.2E-76 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CPU03_RS06110 bc8b4ad4db2fbdb9d15f97f7d1aace8d 323 Gene3D G3DSA:1.10.600.10 1 323 6.9E-101 T 29-03-2018 IPR008949 Isoprenoid synthase domain CPU03_RS06110 bc8b4ad4db2fbdb9d15f97f7d1aace8d 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CPU03_RS06110 bc8b4ad4db2fbdb9d15f97f7d1aace8d 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.5E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.5E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.5E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.5E-40 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.9E-89 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 Gene3D G3DSA:3.90.1150.10 1 79 3.8E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 Gene3D G3DSA:3.40.640.10 80 304 6.0E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 Gene3D G3DSA:3.90.1150.10 305 396 8.1E-28 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS02170 c3d95daaef117f7e19ca0630805b02e3 397 SUPERFAMILY SSF53383 1 397 1.03E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 SUPERFAMILY SSF56801 18 552 2.62E-150 T 29-03-2018 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Gene3D G3DSA:3.40.50.980 20 216 3.3E-43 T 29-03-2018 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Pfam PF00501 AMP-binding enzyme 29 460 5.8E-109 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Gene3D G3DSA:2.30.38.10 372 453 2.1E-28 T 29-03-2018 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Gene3D G3DSA:3.40.50.980 217 371 7.0E-40 T 29-03-2018 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Gene3D G3DSA:3.30.300.30 455 558 2.3E-26 T 29-03-2018 CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS01325 0b6c29a8ac83821bf7a430fadd1333d3 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 3.0E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CPU03_RS05495 691c735df4baeb6ac571429f82631a4d 88 Pfam PF04380 Membrane fusogenic activity 1 77 2.0E-28 T 29-03-2018 IPR007475 Membrane fusogenic activity CPU03_RS06850 f570e132c4cd54683a1573c1eac33c27 485 PIRSF PIRSF002457 1 485 2.3E-155 T 29-03-2018 IPR030676 Citrate carrier CitT-related CPU03_RS06850 f570e132c4cd54683a1573c1eac33c27 485 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 477 5.4E-164 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS06850 f570e132c4cd54683a1573c1eac33c27 485 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 484 8.3E-177 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:1.20.120.160 645 763 9.4E-19 T 29-03-2018 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.8E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Pfam PF00072 Response regulator receiver domain 528 639 1.8E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:1.10.287.130 274 343 2.6E-16 T 29-03-2018 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SMART SM00388 282 347 3.7E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SMART SM00448 526 639 2.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:3.30.565.10 351 514 5.6E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 3.8E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SUPERFAMILY SSF47384 269 347 6.87E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:1.10.287.970 3 88 2.5E-37 T 29-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SUPERFAMILY SSF55785 140 267 5.58E-23 T 29-03-2018 IPR000014 PAS domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SUPERFAMILY SSF52172 526 644 3.13E-28 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 3.6E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Pfam PF01627 Hpt domain 686 759 3.7E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:3.40.50.2300 515 644 1.1E-29 T 29-03-2018 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SMART SM00091 155 221 1.7E-8 T 29-03-2018 IPR000014 PAS domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 PIRSF PIRSF003182 1 778 0.0 T 29-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Gene3D G3DSA:3.30.450.20 134 273 5.6E-26 T 29-03-2018 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SMART SM00073 675 772 8.0E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SUPERFAMILY SSF47226 662 774 5.23E-31 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SUPERFAMILY SSF55874 336 503 1.28E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 3.0E-17 T 29-03-2018 IPR000014 PAS domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 SMART SM00387 394 507 2.4E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05200 ac96eabb4fde48725918801262e03be4 778 Pfam PF00989 PAS fold 157 266 1.5E-18 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS08730 33c4d62bbf64dd31ba1c6e70dbdb8839 257 SMART SM00052 19 247 2.1E-11 T 29-03-2018 IPR001633 EAL domain CPU03_RS08730 33c4d62bbf64dd31ba1c6e70dbdb8839 257 Gene3D G3DSA:3.20.20.450 23 251 1.5E-30 T 29-03-2018 IPR001633 EAL domain CPU03_RS08730 33c4d62bbf64dd31ba1c6e70dbdb8839 257 Pfam PF00563 EAL domain 34 242 1.7E-29 T 29-03-2018 IPR001633 EAL domain CPU03_RS08730 33c4d62bbf64dd31ba1c6e70dbdb8839 257 SUPERFAMILY SSF141868 33 249 2.09E-32 T 29-03-2018 IPR001633 EAL domain CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 SUPERFAMILY SSF82866 79 302 2.88E-43 T 29-03-2018 CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 Gene3D G3DSA:1.20.1640.10 98 312 2.5E-34 T 29-03-2018 CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 98 288 3.4E-57 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 Pfam PF07549 SecD/SecF GG Motif 41 65 1.4E-10 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.934 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 4.4E-87 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CPU03_RS03465 32abff4c845f86413b712ac8d15868a4 322 Pfam PF02355 Protein export membrane protein 117 300 1.9E-70 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 235 306 5.1E-17 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 SUPERFAMILY SSF74653 228 298 6.02E-19 T 29-03-2018 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 Gene3D G3DSA:3.30.2420.10 238 313 1.3E-18 T 29-03-2018 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 PRINTS PR01374 Gram-negative bacterial tonB protein signature 269 286 5.7E-25 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 PRINTS PR01374 Gram-negative bacterial tonB protein signature 250 268 5.7E-25 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 PRINTS PR01374 Gram-negative bacterial tonB protein signature 229 250 5.7E-25 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 152 5.7E-25 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CPU03_RS00990 e9e7a7cfffa28b33ad61861b507d3ac7 313 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 234 306 6.8E-17 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 Pfam PF00480 ROK family 89 392 1.2E-88 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 Gene3D G3DSA:3.30.420.40 210 402 2.0E-47 T 29-03-2018 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 SUPERFAMILY SSF46785 14 79 6.42E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 Pfam PF01047 MarR family 25 63 3.8E-7 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 SUPERFAMILY SSF53067 88 394 9.34E-57 T 29-03-2018 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 Gene3D G3DSA:3.30.420.40 75 209 1.1E-22 T 29-03-2018 CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 Gene3D G3DSA:1.10.10.10 17 74 1.2E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12360 0a10b5c216dc208d14c076b950480894 408 ProSitePatterns PS01125 ROK family signature. 220 247 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 SUPERFAMILY SSF52821 456 545 8.51E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Gene3D G3DSA:3.50.50.60 254 341 2.1E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Gene3D G3DSA:3.50.50.60 1 122 2.5E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Gene3D G3DSA:3.40.250.10 445 549 2.8E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 SMART SM00450 454 549 1.9E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.0E-25 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 6.0E-25 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.0E-25 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.0E-25 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 6.0E-25 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 285 1.2E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 SUPERFAMILY SSF55424 325 446 3.09E-32 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Gene3D G3DSA:3.50.50.60 123 253 7.4E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.2E-17 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 403 2.2E-17 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 2.2E-17 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 2.2E-17 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 2.2E-17 T 29-03-2018 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 433 1.6E-14 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Pfam PF00581 Rhodanese-like domain 459 540 1.9E-5 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 SUPERFAMILY SSF51905 152 319 2.13E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 SUPERFAMILY SSF51905 1 194 1.75E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS03075 957bd5e1d8cf02990ef6e831aa70cdcc 551 Gene3D G3DSA:3.30.390.30 342 444 2.3E-25 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 7.5E-103 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 Gene3D G3DSA:3.20.20.70 2 316 2.6E-123 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 5.4E-164 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.48 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS04970 31ed70cb84c214c9eed740ba997deb93 317 SUPERFAMILY SSF51569 1 316 2.62E-117 T 29-03-2018 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Gene3D G3DSA:3.90.1150.10 343 442 3.6E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Gene3D G3DSA:3.40.640.10 96 342 6.9E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Pfam PF02347 Glycine cleavage system P-protein 464 740 4.5E-8 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Pfam PF02347 Glycine cleavage system P-protein 17 440 5.6E-175 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 SUPERFAMILY SSF53383 17 440 1.05E-94 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 959 25.141 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 953 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Gene3D G3DSA:3.90.1150.10 776 908 3.3E-43 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 Gene3D G3DSA:3.40.640.10 530 775 1.8E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 SUPERFAMILY SSF53383 463 890 2.59E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS10620 ae7de48ef21304a41d362aa4c9711de2 960 SUPERFAMILY SSF53383 932 955 2.59E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS11965 0201d7cfe907652d54c387dd1b0939dc 182 SUPERFAMILY SSF56925 24 182 6.59E-78 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS11965 0201d7cfe907652d54c387dd1b0939dc 182 Gene3D G3DSA:2.40.160.20 25 182 5.5E-63 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS11965 0201d7cfe907652d54c387dd1b0939dc 182 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 29 170 4.0E-65 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CPU03_RS11965 0201d7cfe907652d54c387dd1b0939dc 182 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 1 182 41.13 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CPU03_RS11965 0201d7cfe907652d54c387dd1b0939dc 182 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 33 179 4.0E-65 T 29-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 SUPERFAMILY SSF47831 23 143 6.28E-36 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Gene3D G3DSA:1.10.274.10 24 144 7.5E-39 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 SUPERFAMILY SSF52009 125 246 1.02E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Gene3D G3DSA:3.20.20.60 250 573 9.6E-105 T 29-03-2018 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.5E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 PIRSF PIRSF000732 1 574 8.7E-220 T 29-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.6E-30 T 29-03-2018 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.6E-30 T 29-03-2018 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.6E-30 T 29-03-2018 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.6E-30 T 29-03-2018 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 SUPERFAMILY SSF51621 250 549 8.11E-112 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 2.7E-259 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 8.0E-126 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CPU03_RS02715 8456ea3a5e4bab48bb5026f9fedc8a87 575 Gene3D G3DSA:3.50.30.10 145 244 1.3E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS00180 9d50aebd0e88c7f849770a4b6faf5482 112 Pfam PF02924 Bacteriophage lambda head decoration protein D 6 112 7.2E-17 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 CPU03_RS00180 9d50aebd0e88c7f849770a4b6faf5482 112 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 30 110 5.0E-29 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 CPU03_RS00180 9d50aebd0e88c7f849770a4b6faf5482 112 Gene3D G3DSA:2.40.300.10 2 111 6.1E-22 T 29-03-2018 CPU03_RS00180 9d50aebd0e88c7f849770a4b6faf5482 112 SUPERFAMILY SSF51274 15 111 1.7E-40 T 29-03-2018 IPR004195 Head decoration protein D GO:0019028 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 SUPERFAMILY SSF50249 1 105 5.71E-35 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 4.7E-266 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Gene3D G3DSA:3.30.930.10 131 586 6.3E-102 T 29-03-2018 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 6.1E-106 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 99 7.8E-18 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Gene3D G3DSA:2.40.50.140 1 108 3.8E-26 T 29-03-2018 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 9.5E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 9.5E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 9.5E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 9.5E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 SUPERFAMILY SSF55261 288 419 3.76E-45 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 SUPERFAMILY SSF55681 420 582 2.68E-107 T 29-03-2018 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 SUPERFAMILY SSF55681 108 287 2.68E-107 T 29-03-2018 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.43 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CPU03_RS01445 cb71ff00b06b5370954839f9324b5868 591 Pfam PF02938 GAD domain 307 406 5.7E-30 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 257 1.7E-51 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 29-03-2018 CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 255 2.5E-52 T 29-03-2018 IPR000150 Cof family GO:0016787 CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 209 231 - T 29-03-2018 CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 Gene3D G3DSA:3.40.50.1000 1 241 3.7E-30 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 SUPERFAMILY SSF56784 2 258 1.8E-60 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03305 2f06878d99115fd99c47453b31daa6b5 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 228 3.7E-32 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 Pfam PF01979 Amidohydrolase family 73 434 3.2E-78 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 Gene3D G3DSA:2.30.40.10 7 89 3.6E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 SUPERFAMILY SSF51338 32 91 1.36E-9 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 SUPERFAMILY SSF51556 75 378 1.4E-103 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 Gene3D G3DSA:3.20.20.140 90 377 1.1E-71 T 29-03-2018 CPU03_RS09775 e986468578b659f13f03889d1a3e1907 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 5.6E-190 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.7E-30 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 SUPERFAMILY SSF48300 3 58 8.89E-17 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 5.8E-48 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 Gene3D G3DSA:1.20.5.710 2 51 5.6E-17 T 29-03-2018 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 25.191 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 Gene3D G3DSA:3.30.1390.10 52 122 7.1E-31 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 SUPERFAMILY SSF54736 51 122 1.41E-24 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 3.0E-16 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07070 f380ed7c68d84315fae4f88aeb406b19 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.0E-17 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS02030 c337f199a53388a02b7062ee54cfcd12 140 SMART SM00881 10 104 3.0E-25 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS02030 c337f199a53388a02b7062ee54cfcd12 140 Pfam PF13380 CoA binding domain 14 130 1.8E-37 T 29-03-2018 IPR003781 CoA-binding GO:0048037 CPU03_RS02030 c337f199a53388a02b7062ee54cfcd12 140 Gene3D G3DSA:3.40.50.720 10 134 2.9E-32 T 29-03-2018 CPU03_RS02030 c337f199a53388a02b7062ee54cfcd12 140 SUPERFAMILY SSF51735 4 135 8.16E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.94 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 SUPERFAMILY SSF48113 432 723 1.41E-111 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Gene3D G3DSA:1.10.520.10 441 589 5.0E-33 T 29-03-2018 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Pfam PF00141 Peroxidase 406 698 1.3E-36 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Pfam PF00141 Peroxidase 68 398 7.0E-49 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 29-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Gene3D G3DSA:1.10.520.10 56 214 1.8E-37 T 29-03-2018 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Gene3D G3DSA:1.10.420.10 590 699 4.5E-34 T 29-03-2018 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 Gene3D G3DSA:1.10.420.10 232 399 2.2E-42 T 29-03-2018 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.4E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.4E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.4E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.4E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.4E-18 T 29-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.1E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.1E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.1E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.1E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.1E-52 T 29-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CPU03_RS03765 35d0d20b133440eb34cd375f265e88ff 724 SUPERFAMILY SSF48113 18 431 9.58E-150 T 29-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 Pfam PF02803 Thiolase, C-terminal domain 270 392 8.7E-52 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 Gene3D G3DSA:3.40.47.10 266 390 7.2E-36 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.8E-102 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 PIRSF PIRSF000429 1 394 4.8E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 SUPERFAMILY SSF53901 271 392 2.23E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 Gene3D G3DSA:3.40.47.10 1 132 4.8E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 Gene3D G3DSA:3.40.47.10 150 265 6.8E-27 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 SUPERFAMILY SSF53901 4 270 1.23E-84 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14910 41ec1e435e9d0c00dc28c2d4df7c07c6 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.0E-151 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Pfam PF00817 impB/mucB/samB family 7 154 3.1E-47 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 SUPERFAMILY SSF100879 241 350 5.65E-28 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 35.971 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 SUPERFAMILY SSF56672 1 234 3.38E-86 T 29-03-2018 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Gene3D G3DSA:3.30.70.270 41 111 3.7E-23 T 29-03-2018 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Gene3D G3DSA:3.30.70.270 112 170 4.9E-21 T 29-03-2018 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Gene3D G3DSA:1.10.150.20 171 242 6.4E-21 T 29-03-2018 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Gene3D G3DSA:3.30.1490.100 243 351 6.4E-29 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Pfam PF11798 IMS family HHH motif 167 197 3.0E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CPU03_RS03945 7691274f4e632e7ba18c7868541725eb 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 337 1.6E-8 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 Pfam PF01047 MarR family 53 112 1.1E-14 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 SMART SM00347 46 148 3.9E-31 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 Gene3D G3DSA:1.10.10.10 4 167 1.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 SUPERFAMILY SSF46785 21 165 1.22E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 3.5E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.5E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.5E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS11550 7988dfb68b14bde8c111a3709afb9c62 172 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.5E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-28 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 Gene3D G3DSA:3.30.1360.40 76 151 1.6E-26 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.322 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 Gene3D G3DSA:1.10.10.10 8 69 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.6E-25 T 29-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.6E-47 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.1E-22 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 SUPERFAMILY SSF46785 3 77 3.26E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 SUPERFAMILY SSF55252 82 150 1.19E-19 T 29-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS06125 b0f1f27f6d749577c3bebbc74185ba8c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 5.5E-24 T 29-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.5E-56 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.5E-39 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.5E-39 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.5E-39 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.5E-39 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.5E-39 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 Gene3D G3DSA:3.30.70.141 1 55 6.5E-17 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 Gene3D G3DSA:3.30.70.141 56 140 6.8E-34 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.568 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 SMART SM00562 3 140 5.4E-87 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS11335 74b5b26cba426c66c238db5b11a03034 143 SUPERFAMILY SSF54919 1 140 9.95E-59 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CPU03_RS10875 b431a7e1cd9c0d7016cb661e90ebcdd7 633 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 1.6E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10875 b431a7e1cd9c0d7016cb661e90ebcdd7 633 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 1.6E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10875 b431a7e1cd9c0d7016cb661e90ebcdd7 633 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 1.6E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10875 b431a7e1cd9c0d7016cb661e90ebcdd7 633 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.6E-13 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10875 b431a7e1cd9c0d7016cb661e90ebcdd7 633 Pfam PF00361 Proton-conducting membrane transporter 132 413 7.4E-47 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 SUPERFAMILY SSF111369 40 211 1.05E-21 T 29-03-2018 CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 231 2.3E-34 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 230 2.1E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 Gene3D G3DSA:2.40.50.100 43 100 1.6E-16 T 29-03-2018 CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 Gene3D G3DSA:2.40.50.100 151 212 0.12 T 29-03-2018 CPU03_RS03590 a9726b71764711723847054b78e9b2d2 285 Gene3D G3DSA:1.10.287.470 101 150 0.0012 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:3.40.228.10 611 668 5.7E-8 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:3.40.228.10 222 467 3.2E-61 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:3.40.228.10 468 526 0.0021 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:2.40.40.20 669 824 7.8E-32 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 SUPERFAMILY SSF53706 66 687 4.97E-169 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 510 527 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:3.90.55.10 537 610 1.1E-19 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Pfam PF00384 Molybdopterin oxidoreductase 108 568 1.7E-92 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Pfam PF01568 Molydopterin dinucleotide binding domain 687 802 7.9E-26 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 65 828 0.0 T 29-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 Gene3D G3DSA:3.40.50.740 108 221 1.8E-16 T 29-03-2018 CPU03_RS13775 09b1a399d0c6554bf220bea7d94113fd 830 SUPERFAMILY SSF50692 679 827 2.49E-40 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 Pfam PF09327 Domain of unknown function (DUF1983) 901 977 3.3E-16 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 SMART SM00060 613 698 2.2 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 SMART SM00060 711 794 25.0 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 Pfam PF13550 Putative phage tail protein 332 494 4.9E-34 T 29-03-2018 IPR032876 Tip attachment protein J CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 Gene3D G3DSA:1.20.5.50 807 921 1.2E-4 T 29-03-2018 CPU03_RS00110 c7295302d83d8bf1cd0e39cf997769e3 1039 Gene3D G3DSA:2.60.40.10 611 806 1.7E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 SMART SM00155 262 289 0.1 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 SMART SM00155 110 137 1.8 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 Pfam PF13091 PLD-like domain 38 165 2.2E-19 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 Pfam PF13091 PLD-like domain 193 312 1.8E-24 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 SUPERFAMILY SSF56024 181 318 2.09E-26 T 29-03-2018 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 SUPERFAMILY SSF56024 26 170 8.97E-25 T 29-03-2018 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 Gene3D G3DSA:3.30.870.10 185 330 2.4E-26 T 29-03-2018 CPU03_RS12965 97b2bbd3402a2e117423c202654549c6 341 Gene3D G3DSA:3.30.870.10 25 184 1.3E-25 T 29-03-2018 CPU03_RS16515 74158591fdd9c283fb6fa49b70a07356 654 Gene3D G3DSA:3.20.20.70 10 171 6.6E-7 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS16515 74158591fdd9c283fb6fa49b70a07356 654 Pfam PF01136 Peptidase family U32 79 300 3.5E-71 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS16515 74158591fdd9c283fb6fa49b70a07356 654 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS16515 74158591fdd9c283fb6fa49b70a07356 654 Pfam PF12392 Collagenase 391 504 4.0E-20 T 29-03-2018 IPR020988 Peptidase U32, collagenase CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 SUPERFAMILY SSF56059 97 302 1.08E-55 T 29-03-2018 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 8.5E-18 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 SUPERFAMILY SSF52440 3 96 2.21E-28 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Gene3D G3DSA:3.40.50.20 1 96 2.5E-31 T 29-03-2018 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Gene3D G3DSA:3.30.470.20 174 305 1.3E-36 T 29-03-2018 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 PIRSF PIRSF039102 42 306 2.0E-88 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 PIRSF PIRSF039102 1 53 4.3E-8 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 35.559 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 4.1E-105 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Gene3D G3DSA:3.30.1490.20 97 173 3.3E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 4.9E-62 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04660 7ca87bf6f269b7ab7e19ac55717e963a 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 2.0E-68 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 Gene3D G3DSA:1.10.760.10 315 381 0.74 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 PIRSF PIRSF000014 1 383 1.1E-173 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 3 380 5.5E-183 T 29-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 Gene3D G3DSA:1.10.468.10 38 203 4.1E-30 T 29-03-2018 CPU03_RS06500 b72896242530890f73d5d184ca3a65f1 385 SUPERFAMILY SSF48695 9 185 2.52E-52 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS01315 d24e3d7115c01392a9e495ede7ba38cc 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 2.7E-35 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CPU03_RS01315 d24e3d7115c01392a9e495ede7ba38cc 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.7E-25 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CPU03_RS01315 d24e3d7115c01392a9e495ede7ba38cc 89 SUPERFAMILY SSF55229 32 84 3.92E-18 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CPU03_RS01315 d24e3d7115c01392a9e495ede7ba38cc 89 Gene3D G3DSA:3.30.1070.10 1 83 9.5E-29 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CPU03_RS01315 d24e3d7115c01392a9e495ede7ba38cc 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.287 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 Gene3D G3DSA:1.10.3080.10 1 409 2.7E-60 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 SUPERFAMILY SSF81340 9 404 4.71E-71 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 PRINTS PR00762 Chloride channel signature 160 179 4.2E-15 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 PRINTS PR00762 Chloride channel signature 109 128 4.2E-15 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 PRINTS PR00762 Chloride channel signature 354 370 4.2E-15 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 PRINTS PR00762 Chloride channel signature 372 391 4.2E-15 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11950 66120bcabe6672faa683b589d6a2ea3c 409 Pfam PF00654 Voltage gated chloride channel 70 403 3.8E-64 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS00135 55adac477b340920b1f2289c4ff6d6b6 947 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 730 802 3.2E-20 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CPU03_RS00135 55adac477b340920b1f2289c4ff6d6b6 947 Gene3D G3DSA:1.20.1480.30 353 489 9.7E-4 T 29-03-2018 CPU03_RS00135 55adac477b340920b1f2289c4ff6d6b6 947 Pfam PF06791 Prophage tail length tape measure protein 136 336 1.9E-68 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CPU03_RS00135 55adac477b340920b1f2289c4ff6d6b6 947 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 578 907 2.6E-72 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 Gene3D G3DSA:3.10.20.30 1 106 7.9E-31 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 6.8E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 SUPERFAMILY SSF46548 107 229 8.37E-32 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 Gene3D G3DSA:1.10.1060.10 107 243 2.8E-27 T 29-03-2018 CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 SUPERFAMILY SSF54292 4 106 3.91E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 5.5E-97 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.6E-32 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06375 3b9f591ac747202d76ca7abc4940da86 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 SUPERFAMILY SSF56042 164 336 8.24E-51 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 46.044 T 29-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 Gene3D G3DSA:3.90.650.10 164 347 1.3E-41 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 SUPERFAMILY SSF55326 7 160 9.16E-42 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 PIRSF PIRSF036407 1 345 9.5E-118 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 334 1.4E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 Gene3D G3DSA:3.30.1330.10 1 162 1.5E-36 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 1.5E-137 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CPU03_RS01130 e4b84b8d1999cb12298e7974f12c7565 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 2.0E-19 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 SMART SM01011 1 135 2.2E-52 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 SUPERFAMILY SSF55920 175 434 7.72E-85 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 Gene3D G3DSA:3.90.230.10 172 439 2.4E-87 T 29-03-2018 CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 SUPERFAMILY SSF53092 2 174 9.68E-51 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 Pfam PF00557 Metallopeptidase family M24 181 412 5.7E-64 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 Gene3D G3DSA:3.40.350.10 1 171 4.0E-45 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CPU03_RS10595 af98b208d436b926174ddcf5bc70f81c 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 5.0E-34 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CPU03_RS02525 66dd490e6639970aef2471a2bf37c118 229 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 1 225 2.7E-101 T 29-03-2018 IPR005261 Conserved hypothetical protein CHP00659 CPU03_RS02525 66dd490e6639970aef2471a2bf37c118 229 Pfam PF04172 LrgB-like family 11 223 6.3E-79 T 29-03-2018 IPR007300 CidB/LrgB family CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 Gene3D G3DSA:3.40.710.10 23 283 2.2E-43 T 29-03-2018 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 4.8E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 4.8E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 4.8E-16 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 264 1.3E-95 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 Gene3D G3DSA:2.60.410.10 284 375 2.1E-20 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 SUPERFAMILY SSF56601 10 284 9.25E-80 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 SUPERFAMILY SSF69189 284 377 1.04E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 375 4.3E-25 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS13850 151bc2f06e272af04f4dcc0b287ce598 399 SMART SM00936 284 375 2.8E-35 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 29-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 PIRSF PIRSF006614 8 151 4.7E-66 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 39.103 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 5.1E-66 T 29-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 SMART SM00851 25 118 3.4E-26 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 SUPERFAMILY SSF52335 5 150 1.15E-58 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 Pfam PF02142 MGS-like domain 26 117 9.6E-20 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS02040 12a9e5f39fbb1b81dfda3818ec9e7075 152 Gene3D G3DSA:3.40.50.1380 1 152 1.1E-45 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 431 2.1E-82 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 PIRSF PIRSF002741 19 517 1.0E-82 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 SUPERFAMILY SSF53850 26 513 3.44E-122 T 29-03-2018 CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 Gene3D G3DSA:3.40.190.10 179 275 4.8E-23 T 29-03-2018 CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 518 4.3E-227 T 29-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 Gene3D G3DSA:3.90.76.10 33 178 1.4E-29 T 29-03-2018 CPU03_RS15285 db01cd20c7b564c0751661b18c009fa1 522 Gene3D G3DSA:3.10.105.10 276 491 2.0E-46 T 29-03-2018 CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 225 1.4E-86 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 SMART SM00479 7 184 2.7E-49 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 SUPERFAMILY SSF53098 7 185 4.14E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 Gene3D G3DSA:3.30.420.10 1 191 7.0E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 Pfam PF00929 Exonuclease 9 175 3.1E-40 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS11250 9f9148e5fe08e469e7cfafba5c8e0a5f 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 4.8E-94 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS01880 e9917fff6d4ca2a167938efe17682f39 199 SUPERFAMILY SSF81342 21 185 2.98E-7 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS01880 e9917fff6d4ca2a167938efe17682f39 199 Pfam PF01292 Prokaryotic cytochrome b561 22 187 1.1E-11 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS01880 e9917fff6d4ca2a167938efe17682f39 199 Gene3D G3DSA:1.20.950.20 18 195 6.5E-13 T 29-03-2018 CPU03_RS02375 67a544e9f8c9d5f7f36774b5e3d1ec12 275 Pfam PF14305 TupA-like ATPgrasp 42 269 1.4E-46 T 29-03-2018 IPR029465 TupA-like ATPgrasp protein CPU03_RS02375 67a544e9f8c9d5f7f36774b5e3d1ec12 275 SUPERFAMILY SSF56059 76 252 4.24E-5 T 29-03-2018 CPU03_RS02375 67a544e9f8c9d5f7f36774b5e3d1ec12 275 Gene3D G3DSA:3.30.470.20 134 259 9.5E-4 T 29-03-2018 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 PIRSF PIRSF000813 1 408 1.6E-194 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Gene3D G3DSA:3.30.460.10 1 118 2.1E-29 T 29-03-2018 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Pfam PF01966 HD domain 229 327 2.7E-11 T 29-03-2018 IPR006674 HD domain CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 SUPERFAMILY SSF81301 2 119 1.85E-29 T 29-03-2018 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 52.44 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Pfam PF01743 Poly A polymerase head domain 3 122 5.4E-18 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 SUPERFAMILY SSF81891 121 406 5.1E-55 T 29-03-2018 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 44.392 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.2E-15 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CPU03_RS05540 807e7cbc17385a575ae1c7de97d3e4dc 415 Gene3D G3DSA:1.10.3090.10 119 410 5.6E-60 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 SUPERFAMILY SSF51735 202 447 2.15E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 PIRSF PIRSF000185 22 448 2.3E-114 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Gene3D G3DSA:3.40.50.720 209 373 7.8E-44 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 SMART SM00839 204 446 9.2E-91 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Gene3D G3DSA:3.40.50.10860 61 190 2.4E-54 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 446 9.6E-85 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 6.9E-49 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 SUPERFAMILY SSF53223 6 196 7.04E-74 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Gene3D G3DSA:1.10.285.10 374 448 7.0E-26 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 Gene3D G3DSA:1.10.285.10 6 60 2.3E-8 T 29-03-2018 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.3E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.3E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.3E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS08830 f4012e644f9839ebbd46dff7ba74679d 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.3E-31 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 398 9.4E-156 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 Pfam PF00483 Nucleotidyl transferase 22 292 2.5E-68 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 Gene3D G3DSA:2.160.10.10 339 421 2.1E-8 T 29-03-2018 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 SUPERFAMILY SSF53448 362 378 8.23E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 SUPERFAMILY SSF53448 20 295 8.23E-78 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 Gene3D G3DSA:3.90.550.10 20 338 7.7E-64 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 SUPERFAMILY SSF51161 313 412 4.02E-20 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS09040 657e54e87558da5b87a0cfd1f0337666 426 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 424 52.583 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Pfam PF01966 HD domain 604 686 1.2E-4 T 29-03-2018 IPR006674 HD domain CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Gene3D G3DSA:3.30.450.20 91 225 1.8E-15 T 29-03-2018 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 SUPERFAMILY SSF55781 433 584 2.4E-8 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Gene3D G3DSA:3.30.450.40 397 587 1.8E-9 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Gene3D G3DSA:3.30.450.20 226 343 0.0011 T 29-03-2018 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 SUPERFAMILY SSF109604 595 684 3.66E-11 T 29-03-2018 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Pfam PF13487 HD domain 830 895 5.7E-22 T 29-03-2018 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 SMART SM00471 599 913 3.8E-9 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 SUPERFAMILY SSF109604 829 941 2.67E-8 T 29-03-2018 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 SMART SM00065 431 582 0.0016 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS16455 5458f7b91388c037075c4e52e2ac107a 980 Gene3D G3DSA:1.10.3210.10 588 967 4.4E-51 T 29-03-2018 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Gene3D G3DSA:1.10.150.280 779 896 2.0E-8 T 29-03-2018 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Gene3D G3DSA:3.20.20.140 1 245 2.3E-38 T 29-03-2018 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 3.4E-177 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Pfam PF14579 Helix-hairpin-helix motif 808 899 1.2E-24 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Pfam PF01336 OB-fold nucleic acid binding domain 1004 1073 8.7E-7 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 SUPERFAMILY SSF89550 6 263 3.73E-18 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1033 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 SMART SM00481 7 74 2.4E-26 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Pfam PF02811 PHP domain 8 171 4.8E-42 T 29-03-2018 IPR004013 PHP domain GO:0003824 CPU03_RS04115 b642c0a3675afb4a6b2694755da1dcd5 1162 Gene3D G3DSA:2.40.50.140 982 1076 1.6E-14 T 29-03-2018 CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 SMART SM00382 221 427 1.7E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 Gene3D G3DSA:1.10.860.10 15 167 4.6E-48 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 Pfam PF03796 DnaB-like helicase C terminal domain 204 460 5.7E-112 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 SUPERFAMILY SSF52540 202 273 9.09E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 SUPERFAMILY SSF52540 300 454 9.09E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 Pfam PF00772 DnaB-like helicase N terminal domain 25 126 9.6E-36 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 462 6.9E-176 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 Gene3D G3DSA:3.40.50.300 185 470 2.1E-65 T 29-03-2018 CPU03_RS06770 302ac745fa4d94027f4aec60cb54cf1a 470 SUPERFAMILY SSF48024 23 134 4.18E-38 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CPU03_RS12635 b9db69b537411e65a763b734464abcaa 354 PIRSF PIRSF001361 1 352 4.3E-161 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS12635 b9db69b537411e65a763b734464abcaa 354 Pfam PF00793 DAHP synthetase I family 41 337 5.3E-106 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS12635 b9db69b537411e65a763b734464abcaa 354 SUPERFAMILY SSF51569 7 348 2.62E-136 T 29-03-2018 CPU03_RS12635 b9db69b537411e65a763b734464abcaa 354 Gene3D G3DSA:3.20.20.70 8 354 1.9E-131 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12635 b9db69b537411e65a763b734464abcaa 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.3E-172 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.0E-300 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 170 5.7E-16 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 SUPERFAMILY SSF54980 399 493 1.01E-23 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Gene3D G3DSA:2.40.30.10 188 287 9.5E-26 T 29-03-2018 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Gene3D G3DSA:3.30.70.870 288 367 1.7E-27 T 29-03-2018 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.4E-11 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 SUPERFAMILY SSF54980 292 370 1.65E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Gene3D G3DSA:3.40.50.300 1 185 2.0E-35 T 29-03-2018 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 9.8E-49 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Gene3D G3DSA:3.30.70.240 390 549 5.0E-26 T 29-03-2018 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Pfam PF00679 Elongation factor G C-terminus 399 482 2.6E-19 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 SUPERFAMILY SSF52540 2 235 8.56E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 7.4E-52 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS11750 3212a20e4381d1d1d56684decbdbbd39 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.086 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 CPU03_RS15355 54853a4570a64939455ceeb56cd4e026 255 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 247 5.8E-118 T 29-03-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 CPU03_RS15355 54853a4570a64939455ceeb56cd4e026 255 SUPERFAMILY SSF56529 36 247 3.53E-75 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15355 54853a4570a64939455ceeb56cd4e026 255 Gene3D G3DSA:2.30.30.370 1 35 2.4E-15 T 29-03-2018 CPU03_RS15355 54853a4570a64939455ceeb56cd4e026 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 244 1.5E-61 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15355 54853a4570a64939455ceeb56cd4e026 255 Gene3D G3DSA:3.90.850.10 36 251 8.8E-74 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 SUPERFAMILY SSF55729 18 119 9.51E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 Gene3D G3DSA:3.40.630.30 4 135 4.3E-8 T 29-03-2018 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 Gene3D G3DSA:3.40.50.620 136 338 4.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.8E-78 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 SMART SM00764 147 333 8.0E-127 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 SUPERFAMILY SSF52374 145 266 6.22E-24 T 29-03-2018 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 SUPERFAMILY SSF52374 303 335 6.22E-24 T 29-03-2018 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 121 337 2.0E-99 T 29-03-2018 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 8 337 1.5E-154 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 200 8.4E-10 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS06820 59707f3acc559d3e6baef82259222c62 358 PIRSF PIRSF005751 1 349 1.2E-131 T 29-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 6.4E-126 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 SUPERFAMILY SSF53639 1 212 2.94E-69 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 Gene3D G3DSA:3.40.225.10 1 213 1.1E-59 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 SMART SM01007 8 182 3.8E-67 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 5.0E-49 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal CPU03_RS06530 d4ff1b196080b5e1f61eb9e5da8ca704 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 58.697 T 29-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF56784 371 391 1.07E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF56784 496 742 1.07E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SMART SM00831 27 100 1.2E-20 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Pfam PF00122 E1-E2 ATPase 151 353 1.8E-41 T 29-03-2018 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF81653 157 273 1.44E-24 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 30 95 5.9E-15 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 657 2.5E-21 T 29-03-2018 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Gene3D G3DSA:2.70.150.10 36 275 9.6E-39 T 29-03-2018 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 231 394 1.2E-19 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 732 8.2E-29 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF81665 274 367 1.02E-100 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF81665 692 900 1.02E-100 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 SUPERFAMILY SSF81665 28 149 1.02E-100 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Gene3D G3DSA:3.40.1110.10 336 550 4.3E-34 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 22 902 0.0 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Pfam PF00689 Cation transporting ATPase, C-terminus 726 894 2.3E-16 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 Gene3D G3DSA:1.20.1110.10 560 897 5.6E-55 T 29-03-2018 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 286 302 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 407 420 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 303 322 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS08860 7d465ce09504e83001ecb31e88406550 903 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 5.5E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-44 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 SUPERFAMILY SSF82607 11 103 1.57E-34 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 5.4E-34 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 PIRSF PIRSF004555 3 109 1.6E-38 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 8.7E-41 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS03200 8ae0aa21de03703db708b4768b49a2bc 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 22.889 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 PIRSF PIRSF000401 1 293 4.0E-94 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.6E-103 T 29-03-2018 CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 SUPERFAMILY SSF53335 51 291 2.69E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.795 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 Gene3D G3DSA:3.40.50.150 99 292 2.0E-34 T 29-03-2018 CPU03_RS09835 fe5d5e4c47e7928f95458adc7109afe7 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 1.6E-117 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 Gene3D G3DSA:3.40.50.300 2 239 1.2E-52 T 29-03-2018 CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 497 6.9E-159 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 SUPERFAMILY SSF52540 1 229 6.44E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 SUPERFAMILY SSF52317 254 459 1.68E-34 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 Pfam PF13500 AAA domain 4 227 1.5E-23 T 29-03-2018 CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 Gene3D G3DSA:3.40.50.880 241 496 1.9E-25 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 506 188.114 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CPU03_RS00380 72af52c44363bc2d2faa05d2b7cbd913 514 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 449 7.3E-58 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 1.4E-35 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 SUPERFAMILY SSF56784 383 565 6.59E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 SUPERFAMILY SSF56784 299 323 6.59E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 SUPERFAMILY SSF81653 116 207 1.57E-20 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 606 4.2E-49 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 335 5.5E-34 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Gene3D G3DSA:3.40.50.1000 450 583 9.2E-34 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Gene3D G3DSA:3.40.1110.10 322 449 2.1E-25 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 4 683 0.0 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Pfam PF00122 E1-E2 ATPase 117 288 9.6E-32 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Gene3D G3DSA:2.70.150.10 15 208 3.0E-23 T 29-03-2018 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.094 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 SUPERFAMILY SSF81665 208 305 5.62E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS12445 8716ec389f0b20f523e2a0028a7e971a 688 SUPERFAMILY SSF81665 30 103 5.62E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS03635 c34d021fc0ea88854646b6ad342781de 206 Gene3D G3DSA:3.40.50.300 2 205 8.1E-51 T 29-03-2018 CPU03_RS03635 c34d021fc0ea88854646b6ad342781de 206 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS03635 c34d021fc0ea88854646b6ad342781de 206 SUPERFAMILY SSF52540 11 202 1.01E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03635 c34d021fc0ea88854646b6ad342781de 206 Pfam PF00005 ABC transporter 12 151 2.7E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS03635 c34d021fc0ea88854646b6ad342781de 206 SMART SM00382 21 205 1.1E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 8.7E-17 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 SUPERFAMILY SSF46785 5 67 8.69E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 Gene3D G3DSA:3.30.70.920 59 150 9.6E-20 T 29-03-2018 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 SMART SM00344 7 114 3.6E-44 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.0E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.0E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.0E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 SUPERFAMILY SSF54909 68 150 9.25E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 1.5E-14 T 29-03-2018 CPU03_RS08045 bcbb6ea2746cd4c4aec31d4885936831 153 Gene3D G3DSA:1.10.10.10 7 57 1.2E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.433 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 Gene3D G3DSA:3.40.50.1860 24 143 1.3E-26 T 29-03-2018 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 SUPERFAMILY SSF53681 28 129 6.41E-31 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 Gene3D G3DSA:3.40.50.1860 144 287 5.0E-28 T 29-03-2018 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 30 238 6.3E-26 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 SUPERFAMILY SSF53681 131 283 1.1E-32 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07740 76647decfbafde11b8dd7595e7678859 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 28 258 4.9E-81 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 Gene3D G3DSA:2.170.130.10 34 149 6.4E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 SUPERFAMILY SSF56935 31 655 2.41E-83 T 29-03-2018 CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 Gene3D G3DSA:2.40.170.20 150 655 1.2E-47 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 Pfam PF00593 TonB dependent receptor 234 654 4.3E-28 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 638 655 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CPU03_RS14980 a3d9aa0b2c2f82903fa9eabbaf464ed7 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 138 5.0E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 Gene3D G3DSA:3.40.50.2300 176 307 9.0E-48 T 29-03-2018 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 Gene3D G3DSA:1.10.260.40 2 54 7.8E-23 T 29-03-2018 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 SUPERFAMILY SSF53822 61 331 2.86E-89 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 SMART SM00354 1 71 2.9E-35 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 Pfam PF13377 Periplasmic binding protein-like domain 169 330 2.6E-44 T 29-03-2018 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.4E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 SUPERFAMILY SSF47413 2 59 1.21E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS07995 6fa92e0640042851a5d74918ce5fcf02 335 Gene3D G3DSA:3.40.50.2300 55 175 4.2E-32 T 29-03-2018 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 SUPERFAMILY SSF57840 1 41 1.03E-14 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 5.4E-10 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 Pfam PF00444 Ribosomal protein L36 1 41 3.6E-18 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.804 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15165 e23721324d878fc02e459f17bc34cac1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 41 0.003 T 29-03-2018 CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 9.1E-91 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 Gene3D G3DSA:3.60.10.10 1 268 9.2E-52 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 SUPERFAMILY SSF56219 1 267 1.11E-85 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 9.9E-21 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 2.8E-103 T 29-03-2018 CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CPU03_RS01105 b7009df2142c8d1b74dc47bb897244f8 269 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 29-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 Pfam PF00483 Nucleotidyl transferase 20 289 3.2E-65 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 422 49.336 T 29-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 SUPERFAMILY SSF51161 322 404 4.16E-16 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 111 119 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 Gene3D G3DSA:3.90.550.10 13 299 6.6E-60 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 Gene3D G3DSA:2.160.10.10 301 406 3.6E-11 T 29-03-2018 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 SUPERFAMILY SSF53448 16 293 1.74E-75 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 396 1.6E-148 T 29-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS09055 7348e61a8a751e3a2c16d4b029e5153b 438 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 210 220 - T 29-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CPU03_RS08165 73626f79dca455fc4b3083a5d8ebf5e3 245 SUPERFAMILY SSF56214 15 90 1.26E-5 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS08165 73626f79dca455fc4b3083a5d8ebf5e3 245 SUPERFAMILY SSF56214 98 157 8.37E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS08165 73626f79dca455fc4b3083a5d8ebf5e3 245 Gene3D G3DSA:3.90.470.20 109 230 1.4E-5 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS08165 73626f79dca455fc4b3083a5d8ebf5e3 245 Gene3D G3DSA:3.90.470.20 7 108 2.9E-8 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS08165 73626f79dca455fc4b3083a5d8ebf5e3 245 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 98 163 6.5E-6 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF13332 Haemagluttinin repeat 813 897 3.2E-4 T 29-03-2018 IPR025157 Hemagglutinin repeat CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF13332 Haemagluttinin repeat 633 791 1.8E-19 T 29-03-2018 IPR025157 Hemagglutinin repeat CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF13332 Haemagluttinin repeat 399 547 4.9E-10 T 29-03-2018 IPR025157 Hemagglutinin repeat CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF13332 Haemagluttinin repeat 1206 1382 2.1E-22 T 29-03-2018 IPR025157 Hemagglutinin repeat CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF13332 Haemagluttinin repeat 931 1092 5.0E-13 T 29-03-2018 IPR025157 Hemagglutinin repeat CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Gene3D G3DSA:2.160.20.10 38 321 7.4E-51 T 29-03-2018 IPR012334 Pectin lyase fold CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Pfam PF05860 haemagglutination activity domain 33 166 1.0E-31 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 Gene3D G3DSA:2.160.20.10 331 546 5.8E-5 T 29-03-2018 IPR012334 Pectin lyase fold CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 SMART SM00912 47 167 2.4E-47 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 SUPERFAMILY SSF51126 39 305 9.73E-61 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CPU03_RS03690 5aa4216cbde2188342d6b672490e1c15 1609 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 65 158 8.1E-18 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 SMART SM00450 155 275 8.2E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 SMART SM00450 7 131 2.8E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 SUPERFAMILY SSF52821 158 278 5.24E-34 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 SUPERFAMILY SSF52821 1 142 1.96E-38 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 Gene3D G3DSA:3.40.250.10 1 148 1.3E-29 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 Gene3D G3DSA:3.40.250.10 149 281 2.1E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 Pfam PF00581 Rhodanese-like domain 8 127 4.3E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS00420 e29439eb0336729276bd8e54df52ea4c 281 Pfam PF00581 Rhodanese-like domain 157 271 6.2E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 107 269 8.1E-60 T 29-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 510 2.1E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Gene3D G3DSA:2.40.430.10 126 205 5.6E-28 T 29-03-2018 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Gene3D G3DSA:3.10.650.10 206 277 1.1E-26 T 29-03-2018 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 SUPERFAMILY SSF161098 270 512 1.83E-58 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Gene3D G3DSA:1.10.3720.10 279 521 7.1E-42 T 29-03-2018 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 SUPERFAMILY SSF160964 22 269 9.42E-80 T 29-03-2018 CPU03_RS06900 32ff9fd13fb037fcc066a2fd3b3e5b00 523 Gene3D G3DSA:1.20.58.370 12 102 1.4E-29 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 SUPERFAMILY SSF50475 3 322 1.61E-125 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.1E-170 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 Gene3D G3DSA:3.40.1670.10 323 459 4.3E-52 T 29-03-2018 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 Gene3D G3DSA:1.20.5.570 460 487 4.1E-18 T 29-03-2018 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.729 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 SUPERFAMILY SSF143968 323 486 1.96E-67 T 29-03-2018 CPU03_RS07190 ac1f3c5467f0c8bff696a5e052090187 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 6.5E-181 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CPU03_RS04135 545132b70d790a03529327b2bf0485d6 151 Pfam PF07977 FabA-like domain 17 141 3.1E-40 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS04135 545132b70d790a03529327b2bf0485d6 151 Gene3D G3DSA:3.10.129.10 1 149 5.1E-55 T 29-03-2018 CPU03_RS04135 545132b70d790a03529327b2bf0485d6 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 3.7E-60 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS04135 545132b70d790a03529327b2bf0485d6 151 SUPERFAMILY SSF54637 10 148 1.68E-50 T 29-03-2018 IPR029069 HotDog domain CPU03_RS04135 545132b70d790a03529327b2bf0485d6 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.595 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 812 0.0 T 29-03-2018 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 PIRSF PIRSF000980 1 1127 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1127 21.225 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 SUPERFAMILY SSF52540 1 352 2.55E-126 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 Gene3D G3DSA:3.40.50.300 332 817 5.1E-68 T 29-03-2018 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 SUPERFAMILY SSF52540 370 816 2.21E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 SUPERFAMILY SSF52980 824 1124 5.9E-86 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 Gene3D G3DSA:1.10.10.160 86 185 1.1E-30 T 29-03-2018 CPU03_RS04325 a65de285707180a1d9d1370938bdf966 1127 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1091 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CPU03_RS10245 86233657c64a450c997c4383332c1b68 434 Gene3D G3DSA:1.20.1250.20 1 199 6.2E-39 T 29-03-2018 CPU03_RS10245 86233657c64a450c997c4383332c1b68 434 Gene3D G3DSA:1.20.1250.20 202 431 4.7E-18 T 29-03-2018 CPU03_RS10245 86233657c64a450c997c4383332c1b68 434 SUPERFAMILY SSF103473 2 414 3.53E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10245 86233657c64a450c997c4383332c1b68 434 Pfam PF07690 Major Facilitator Superfamily 12 375 5.8E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Pfam PF03288 Poxvirus D5 protein-like 673 772 2.6E-21 T 29-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SUPERFAMILY SSF57783 10 96 7.91E-8 T 29-03-2018 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SUPERFAMILY SSF52540 437 623 3.4E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SUPERFAMILY SSF46785 674 772 4.08E-40 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SMART SM00778 30 69 1.2E-14 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Gene3D G3DSA:3.90.580.10 6 97 6.2E-10 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Gene3D G3DSA:3.40.1360.10 199 318 1.3E-15 T 29-03-2018 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Gene3D G3DSA:1.10.10.10 675 771 3.7E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SMART SM00885 339 466 4.6E-18 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Pfam PF13362 Toprim domain 213 303 4.0E-12 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Gene3D G3DSA:3.40.50.300 455 651 6.0E-12 T 29-03-2018 CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Pfam PF08706 D5 N terminal like 373 470 6.6E-8 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 SMART SM00493 211 286 2.7E-6 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS03840 137d03d9f9807a3f28c9771cc9f2f07c 778 Pfam PF08273 Zinc-binding domain of primase-helicase 30 69 2.1E-12 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 SUPERFAMILY SSF48498 93 206 9.85E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 5.7E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 Gene3D G3DSA:1.10.260.40 46 72 2.6E-7 T 29-03-2018 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 Gene3D G3DSA:1.10.10.60 1 45 1.1E-11 T 29-03-2018 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 5.9E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 5.9E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 Gene3D G3DSA:1.10.357.10 73 204 5.1E-17 T 29-03-2018 CPU03_RS13585 c01da430dc39ca49315b61a3bf7e5a45 216 SUPERFAMILY SSF46689 12 81 2.62E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 SUPERFAMILY SSF46894 136 212 4.42E-23 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 8.6E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 8.6E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 8.6E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 Pfam PF00072 Response regulator receiver domain 13 124 2.9E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 5.5E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 SMART SM00448 11 124 7.1E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 SUPERFAMILY SSF52172 11 140 2.13E-34 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 SMART SM00421 152 209 5.8E-26 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 Gene3D G3DSA:3.40.50.2300 10 135 1.3E-35 T 29-03-2018 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02835 a7bcf44dfd7e35060143a85a4738fcf3 215 Gene3D G3DSA:1.10.10.10 136 214 1.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 Pfam PF00149 Calcineurin-like phosphoesterase 34 254 2.1E-16 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 207 224 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 32 50 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 485 504 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 417 440 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 283 303 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 PRINTS PR01607 Apyrase family signature 238 261 1.8E-58 T 29-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 Gene3D G3DSA:3.90.780.10 363 550 7.3E-45 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 Gene3D G3DSA:3.60.21.10 26 362 7.6E-87 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 29-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 SUPERFAMILY SSF55816 363 542 4.71E-50 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 1.0E-31 T 29-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CPU03_RS03150 cd100e20126c37b31be10e18a9cbc582 552 SUPERFAMILY SSF56300 27 360 2.2E-97 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 SUPERFAMILY SSF50685 68 162 3.45E-9 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 Pfam PF03330 Lytic transglycolase 82 168 3.2E-22 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 SUPERFAMILY SSF110997 315 385 4.71E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 10 170 21.992 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 82 181 7.8E-34 T 29-03-2018 IPR012997 Rare lipoprotein A CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 Gene3D G3DSA:2.40.40.10 59 173 2.4E-18 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 Pfam PF05036 Sporulation related domain 314 385 1.1E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS12200 63fab43583b229105dae06e4a12e2aa0 389 Gene3D G3DSA:3.30.70.1070 316 389 4.2E-13 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 SUPERFAMILY SSF52833 2 107 9.01E-41 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 Gene3D G3DSA:3.40.30.10 73 108 7.6E-6 T 29-03-2018 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 9.3E-39 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 PIRSF PIRSF000077 2 108 9.5E-45 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 29-03-2018 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 29-03-2018 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 29-03-2018 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 Pfam PF00085 Thioredoxin 5 106 4.4E-34 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CPU03_RS07495 6bee5a2fdcc7e22bce8c8769e130a0bb 108 Gene3D G3DSA:3.40.30.10 5 72 3.1E-28 T 29-03-2018 CPU03_RS14050 dab5ae003f53253a89e8738d9d8781b4 178 Pfam PF04173 TQO small subunit DoxD 25 170 1.0E-6 T 29-03-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 SUPERFAMILY SSF58104 233 514 6.41E-75 T 29-03-2018 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 Pfam PF02203 Tar ligand binding domain homologue 1 156 1.6E-17 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 Gene3D G3DSA:1.10.287.1060 243 324 1.0E-4 T 29-03-2018 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 1.1E-52 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 SMART SM00283 266 513 1.5E-99 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 2.1E-62 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 2.1E-62 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 2.1E-62 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.1E-62 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 2.1E-62 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 SMART SM00304 213 265 9.9E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 Gene3D G3DSA:1.10.287.950 325 517 7.2E-52 T 29-03-2018 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 SUPERFAMILY SSF47170 27 156 9.42E-8 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS12850 1e529a0296f69142db3f28fe0dda8869 554 Gene3D G3DSA:1.20.120.30 23 187 1.7E-15 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Gene3D G3DSA:3.30.70.1170 174 231 2.4E-19 T 29-03-2018 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 427 3.3E-73 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Gene3D G3DSA:1.10.940.10 1 146 1.5E-30 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Pfam PF01029 NusB family 8 128 1.0E-22 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 SUPERFAMILY SSF53335 142 429 1.12E-82 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 429 8.8E-168 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 2 430 66.629 T 29-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 412 429 1.2E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 1.2E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 1.2E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 1.2E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 1.2E-30 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Gene3D G3DSA:3.40.50.150 232 430 2.0E-58 T 29-03-2018 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 SUPERFAMILY SSF48013 7 150 7.85E-35 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 Gene3D G3DSA:1.10.287.730 147 173 6.1E-14 T 29-03-2018 CPU03_RS09540 4f7f4b17f80fbef73d4ceaa5d616799d 430 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 317 328 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 Gene3D G3DSA:3.40.50.1000 8 218 8.1E-23 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 Pfam PF12710 haloacid dehalogenase-like hydrolase 13 143 6.0E-8 T 29-03-2018 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 3.6E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 3.6E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 3.6E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 3.6E-7 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 SUPERFAMILY SSF56784 6 217 2.71E-43 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09190 b508a564f9abdf4c465841a6a8a36fb0 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.4E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.08 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.4E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 SUPERFAMILY SSF52540 84 364 2.03E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 SMART SM00490 270 351 3.0E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 Gene3D G3DSA:3.40.50.300 235 427 5.9E-45 T 29-03-2018 CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 Gene3D G3DSA:3.40.50.300 4 234 2.0E-50 T 29-03-2018 CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.5E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07500 995ce38dc019952d1938d7a9cd5f4529 429 SMART SM00487 28 234 2.9E-53 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 SUPERFAMILY SSF46689 225 276 4.48E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 Gene3D G3DSA:1.10.10.60 226 280 1.7E-16 T 29-03-2018 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 SMART SM00342 188 271 4.3E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.4E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 Pfam PF12833 Helix-turn-helix domain 195 273 1.2E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS14900 6634b02c8cc6cb822d05d27a4f17cbb5 286 Gene3D G3DSA:2.60.120.10 39 225 7.0E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 Gene3D G3DSA:3.40.50.1000 84 223 4.3E-22 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 2.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 2.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 84 184 4.3E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 SUPERFAMILY SSF56784 5 217 7.84E-41 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 6 199 5.1E-42 T 29-03-2018 IPR006328 L-2-Haloacid dehalogenase GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 91 189 1.2E-8 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS10205 b84a39d573e39fcb5cfc8d640b43f169 237 Gene3D G3DSA:1.10.150.240 20 83 1.1E-11 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 SUPERFAMILY SSF46894 128 226 7.65E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 Gene3D G3DSA:3.40.50.2300 1 124 5.1E-14 T 29-03-2018 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 SMART SM00862 150 226 1.1E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 SMART SM00448 3 114 0.0047 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 SUPERFAMILY SSF52172 4 129 9.25E-16 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 Gene3D G3DSA:1.10.10.10 125 227 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 5.6E-14 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS04505 62d186043b3f9ddd65aa2ee88ac589cc 227 Pfam PF00072 Response regulator receiver domain 5 88 2.4E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14905 9cbcfa9ca4cfbfb5169798cda35e91ab 114 Pfam PF10117 McrBC 5-methylcytosine restriction system component 3 55 1.9E-11 T 29-03-2018 IPR019292 5-methylcytosine restriction system component CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SUPERFAMILY SSF55785 163 291 6.93E-19 T 29-03-2018 IPR000014 PAS domain CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SMART SM00086 253 294 4.2E-7 T 29-03-2018 IPR001610 PAC motif CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SMART SM00267 308 479 4.2E-47 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 185 300 5.8E-17 T 29-03-2018 IPR000014 PAS domain CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 317 478 9.6E-37 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 Gene3D G3DSA:3.30.450.40 19 160 1.7E-14 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 Pfam PF08447 PAS fold 205 281 2.1E-11 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SUPERFAMILY SSF55781 24 171 1.33E-13 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SMART SM00091 180 246 7.2E-6 T 29-03-2018 IPR000014 PAS domain CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 SUPERFAMILY SSF55073 324 476 5.57E-37 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 Gene3D G3DSA:3.30.70.270 313 480 4.4E-43 T 29-03-2018 CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 Gene3D G3DSA:3.30.450.20 161 312 3.9E-25 T 29-03-2018 CPU03_RS11575 329808a2d2df4a391c338fabb3c4d20f 484 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 475 5.1E-35 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 3.6E-71 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 SUPERFAMILY SSF51419 8 236 8.43E-69 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 SMART SM01005 235 359 4.1E-63 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.4E-137 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 Hamap MF_01201 Alanine racemase. 1 359 34.542 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 Pfam PF00842 Alanine racemase, C-terminal domain 235 358 1.4E-39 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 Gene3D G3DSA:3.20.20.10 1 216 2.9E-45 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 SUPERFAMILY SSF50621 229 361 1.08E-44 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 Gene3D G3DSA:2.40.37.10 217 363 1.2E-52 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 155 166 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 268 283 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 120 132 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 60 78 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 251 266 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 192 219 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 26 42 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 341 354 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06765 0b848f1c95652266bb0d4537a9b4c441 363 PRINTS PR00992 Alanine racemase signature 289 306 2.3E-72 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 3.4E-45 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 Gene3D G3DSA:3.40.50.300 5 213 3.1E-56 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 2.6E-94 T 29-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 40.911 T 29-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 SUPERFAMILY SSF52540 8 205 2.18E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 8 25 3.9E-37 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 157 168 3.9E-37 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 87 102 3.9E-37 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 143 153 3.9E-37 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 179 192 3.9E-37 T 29-03-2018 CPU03_RS02445 a4ee679113bbf63623116e390a963cc8 213 PRINTS PR00988 Uridine kinase signature 42 53 3.9E-37 T 29-03-2018 CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 3.6E-5 T 29-03-2018 CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 3.6E-5 T 29-03-2018 CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 3.6E-5 T 29-03-2018 CPU03_RS08285 eb1497823304085075b602632f22b990 219 SUPERFAMILY SSF103088 103 218 2.49E-38 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01021 OMPA domain signature 161 177 6.8E-14 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01021 OMPA domain signature 146 161 6.8E-14 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS08285 eb1497823304085075b602632f22b990 219 PRINTS PR01021 OMPA domain signature 116 138 6.8E-14 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS08285 eb1497823304085075b602632f22b990 219 Pfam PF00691 OmpA family 115 210 6.3E-23 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS08285 eb1497823304085075b602632f22b990 219 Gene3D G3DSA:1.10.3470.10 2 93 1.0E-4 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS08285 eb1497823304085075b602632f22b990 219 Gene3D G3DSA:3.30.1330.60 94 218 7.6E-42 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS08285 eb1497823304085075b602632f22b990 219 Pfam PF13488 Glycine zipper 37 85 5.2E-13 T 29-03-2018 CPU03_RS08285 eb1497823304085075b602632f22b990 219 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 1.1E-6 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 4.4E-119 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 SUPERFAMILY SSF56770 46 310 2.47E-87 T 29-03-2018 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 2.4E-28 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 Gene3D G3DSA:3.40.50.700 45 234 6.5E-49 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 Gene3D G3DSA:4.10.480.10 235 309 1.8E-34 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 PIRSF PIRSF000310 5 357 4.6E-147 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 359 4.6E-201 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CPU03_RS10330 cbfee3363586a9995ee205b053a87b12 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 8.7E-32 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CPU03_RS12085 34ada20553189266ca73e53b6ef21769 148 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 148 3.0E-37 T 29-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 CPU03_RS12085 34ada20553189266ca73e53b6ef21769 148 Pfam PF07180 CaiF/GrlA transcriptional regulator 4 65 9.7E-10 T 29-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 CPU03_RS08250 3688f253c390bccf4a2d3d4f2cbce285 422 Pfam PF00155 Aminotransferase class I and II 69 396 2.3E-22 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS08250 3688f253c390bccf4a2d3d4f2cbce285 422 Gene3D G3DSA:3.90.1150.10 292 413 1.5E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS08250 3688f253c390bccf4a2d3d4f2cbce285 422 Gene3D G3DSA:3.40.640.10 69 291 1.8E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS08250 3688f253c390bccf4a2d3d4f2cbce285 422 SUPERFAMILY SSF53383 3 409 2.64E-65 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 142 8.1E-13 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 158 1.8E-7 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 PIRSF PIRSF006118 13 188 7.5E-74 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 Gene3D G3DSA:3.40.50.1000 19 186 1.5E-24 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 SUPERFAMILY SSF56784 22 181 6.17E-41 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05340 a8ea9d5b62972875d66ce00c1366dcc9 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 2.8E-66 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 Pfam PF00117 Glutamine amidotransferase class-I 6 187 2.1E-42 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 Gene3D G3DSA:3.40.50.880 1 193 6.1E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.3E-34 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 SUPERFAMILY SSF52317 3 191 9.54E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 9.4E-5 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 9.4E-5 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 185 4.0E-53 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.2E-14 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 3.2E-14 T 29-03-2018 CPU03_RS00920 ab2abe233ac927261aa3dadd792f118f 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 3.2E-14 T 29-03-2018 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 788 1.5E-59 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 SUPERFAMILY SSF52009 351 470 7.98E-36 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Gene3D G3DSA:3.30.470.20 199 360 4.9E-45 T 29-03-2018 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 1.8E-27 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 SUPERFAMILY SSF56059 9 386 1.18E-106 T 29-03-2018 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 352 1.4E-117 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 PIRSF PIRSF000854 6 791 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Gene3D G3DSA:3.50.30.10 361 481 3.7E-37 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 SUPERFAMILY SSF51621 471 789 1.31E-94 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Gene3D G3DSA:3.30.1490.20 7 198 7.0E-53 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS16690 f774910aa88e02db68115585b633757b 791 Gene3D G3DSA:3.20.20.60 482 791 6.3E-103 T 29-03-2018 CPU03_RS13660 b7de63183a0d893e25f3143ff0cfb221 115 Pfam PF13989 YejG-like protein 4 109 1.7E-44 T 29-03-2018 IPR020489 Uncharacterised protein family YejG CPU03_RS13660 b7de63183a0d893e25f3143ff0cfb221 115 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 110 2.0E-29 T 29-03-2018 IPR020489 Uncharacterised protein family YejG CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.302 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.8E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:3.90.1800.10 1267 1326 6.7E-12 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 9.6E-27 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:2.40.50.150 814 949 5.8E-30 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 SUPERFAMILY SSF64484 343 939 0.0 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 SUPERFAMILY SSF64484 11 226 0.0 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 8.2E-58 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 8.1E-7 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 331 454 4.9E-17 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:2.40.50.100 715 795 2.5E-26 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 9.2E-160 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:3.90.1100.10 647 713 2.4E-14 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:3.90.1100.10 19 240 3.4E-51 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:3.90.1100.10 343 646 5.9E-79 T 29-03-2018 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 Gene3D G3DSA:2.40.270.10 1019 1242 7.3E-81 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS07065 9cf70a53b62b30e13bf2b160448ebcaf 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Gene3D G3DSA:1.25.40.10 396 490 0.0011 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Pfam PF01435 Peptidase family M48 73 260 3.4E-28 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Gene3D G3DSA:3.30.2010.10 69 156 2.3E-17 T 29-03-2018 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 SUPERFAMILY SSF48452 318 433 1.04E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 490 40.436 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Pfam PF14559 Tetratricopeptide repeat 361 424 3.0E-7 T 29-03-2018 CPU03_RS02910 5e9caaeb11fcd0d8c04b4354391e7fb6 493 Gene3D G3DSA:1.25.40.10 299 395 3.8E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS05905 2e56dadb1d89ef47a86526842d04622d 120 Pfam PF13721 SecD export protein N-terminal TM region 5 93 1.7E-15 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CPU03_RS05905 2e56dadb1d89ef47a86526842d04622d 120 Hamap MF_00904 Modulator protein MzrA [mzrA]. 1 105 24.418 T 29-03-2018 IPR026574 Modulator protein MzrA CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 TIGRFAM TIGR00749 glk: glucokinase 6 310 9.3E-130 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 Gene3D G3DSA:3.40.367.20 110 299 6.0E-31 T 29-03-2018 CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 Gene3D G3DSA:3.30.420.40 1 109 2.5E-17 T 29-03-2018 CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 Pfam PF02685 Glucokinase 6 315 3.6E-122 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 Hamap MF_00524 Glucokinase [glk]. 4 316 35.381 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CPU03_RS02595 dd538cc8f75218652c075d3b0574f52a 325 SUPERFAMILY SSF53067 4 318 4.51E-63 T 29-03-2018 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 PRINTS PR00050 Cold shock protein signature 6 21 1.2E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 5.0E-32 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 PIRSF PIRSF002599 1 69 9.6E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 Gene3D G3DSA:2.40.50.140 3 69 2.8E-28 T 29-03-2018 CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 SUPERFAMILY SSF50249 4 68 6.86E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00020 4c01a9353431f32bf4841953eaddeb36 69 SMART SM00357 5 69 1.0E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 Gene3D G3DSA:1.20.5.470 370 401 2.5E-13 T 29-03-2018 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 SUPERFAMILY SSF69864 177 401 1.07E-85 T 29-03-2018 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 Gene3D G3DSA:3.40.50.620 3 167 1.6E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 Gene3D G3DSA:3.90.1260.10 168 359 5.6E-80 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 50.346 T 29-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 Pfam PF00764 Arginosuccinate synthase 10 397 2.9E-139 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 1.0E-132 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS07805 031319b150aa97a66612b7c4f1a3967e 404 SUPERFAMILY SSF52402 8 172 3.14E-42 T 29-03-2018 CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 Gene3D G3DSA:3.20.20.150 1 392 6.6E-110 T 29-03-2018 CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 1.3E-210 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 SUPERFAMILY SSF51658 1 383 6.34E-81 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 226.496 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 4.8E-156 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CPU03_RS13750 ad0381a800a7eb30643aac93bf7e517d 396 PIRSF PIRSF016049 1 392 4.8E-182 T 29-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CPU03_RS04000 efdd91d814fdf4259a14c9fe021fe05a 236 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 53 217 1.0E-43 T 29-03-2018 CPU03_RS04000 efdd91d814fdf4259a14c9fe021fe05a 236 Pfam PF13942 YfhG lipoprotein 53 215 3.8E-64 T 29-03-2018 IPR025262 Quorum-sensing regulator protein G CPU03_RS05275 a024ef093ffef00dbbd6cf6803706595 377 Pfam PF03969 AFG1-like ATPase 9 372 1.8E-135 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CPU03_RS05275 a024ef093ffef00dbbd6cf6803706595 377 Hamap MF_01919 Cell division protein ZapE [zapE]. 9 377 51.154 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CPU03_RS05275 a024ef093ffef00dbbd6cf6803706595 377 SUPERFAMILY SSF52540 70 203 9.25E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05275 a024ef093ffef00dbbd6cf6803706595 377 Gene3D G3DSA:3.40.50.300 26 367 1.9E-11 T 29-03-2018 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 3.7E-186 T 29-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 PIRSF PIRSF001359 13 358 2.8E-102 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 Gene3D G3DSA:3.20.20.70 4 357 4.4E-101 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.0E-89 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 SUPERFAMILY SSF51569 4 356 2.64E-131 T 29-03-2018 CPU03_RS10540 75caadae895114a01a394c0dff646bbb 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 3.0E-114 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 2.8E-96 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 Gene3D G3DSA:3.40.50.1580 4 273 1.5E-59 T 29-03-2018 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 24 271 2.4E-120 T 29-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 29-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 PIRSF PIRSF000477 2 273 9.9E-100 T 29-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 Pfam PF01048 Phosphorylase superfamily 25 271 1.6E-43 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS14945 6de6846fdffa5b8bae1e131e640000c8 275 SUPERFAMILY SSF53167 7 272 1.44E-82 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS02550 3171c375630b56dd6f0fedccb01ecf32 726 Pfam PF00563 EAL domain 488 719 1.1E-58 T 29-03-2018 IPR001633 EAL domain CPU03_RS02550 3171c375630b56dd6f0fedccb01ecf32 726 Gene3D G3DSA:3.20.20.450 472 726 1.8E-66 T 29-03-2018 IPR001633 EAL domain CPU03_RS02550 3171c375630b56dd6f0fedccb01ecf32 726 SUPERFAMILY SSF141868 488 724 8.5E-64 T 29-03-2018 IPR001633 EAL domain CPU03_RS02550 3171c375630b56dd6f0fedccb01ecf32 726 SMART SM00052 482 724 4.3E-72 T 29-03-2018 IPR001633 EAL domain CPU03_RS01800 d04cdf8824406e088ced602ab76a0255 114 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 2.0E-36 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CPU03_RS01800 d04cdf8824406e088ced602ab76a0255 114 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.36 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CPU03_RS01800 d04cdf8824406e088ced602ab76a0255 114 Gene3D G3DSA:1.10.4000.10 3 102 4.8E-45 T 29-03-2018 CPU03_RS01800 d04cdf8824406e088ced602ab76a0255 114 SUPERFAMILY SSF63592 1 98 4.71E-38 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CPU03_RS01800 d04cdf8824406e088ced602ab76a0255 114 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 2.2E-40 T 29-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 252 4.7E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 Gene3D G3DSA:3.40.190.10 25 141 2.3E-37 T 29-03-2018 CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 Gene3D G3DSA:3.40.190.10 142 250 4.4E-24 T 29-03-2018 CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 SUPERFAMILY SSF53850 2 254 7.82E-67 T 29-03-2018 CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 SMART SM00062 35 254 5.5E-75 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS00890 bf720dce662789c03498cf991a6bd69b 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Gene3D G3DSA:1.10.443.10 113 293 1.6E-48 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.545 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 1.1E-21 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Gene3D G3DSA:1.10.150.130 5 112 1.8E-22 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 SUPERFAMILY SSF47823 5 101 8.44E-35 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 57.793 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 1.9E-117 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 SUPERFAMILY SSF56349 107 297 1.68E-58 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS10665 42322365c1fe15e3977b574ed019d3b6 299 Pfam PF00589 Phage integrase family 114 285 6.5E-53 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS06910 5222a62162965004dd5cccb92bb86c9c 135 PIRSF PIRSF029598 1 135 2.1E-48 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CPU03_RS06910 5222a62162965004dd5cccb92bb86c9c 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.245 T 29-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CPU03_RS06910 5222a62162965004dd5cccb92bb86c9c 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 3.8E-16 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 SMART SM00388 267 335 3.4E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Gene3D G3DSA:3.30.565.10 339 487 1.9E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 3.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 SUPERFAMILY SSF47384 250 335 2.55E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Gene3D G3DSA:1.10.287.130 273 331 4.3E-15 T 29-03-2018 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 2.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 2.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Gene3D G3DSA:3.30.450.20 24 172 8.3E-6 T 29-03-2018 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 487 3.1E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Pfam PF00672 HAMP domain 199 255 2.1E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 SMART SM00387 381 487 5.5E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 Gene3D G3DSA:3.30.450.20 202 272 0.0013 T 29-03-2018 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 SMART SM00304 199 259 0.002 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08825 5588ece5f40b379925f5bd5dca8e21a0 487 SUPERFAMILY SSF55874 325 487 2.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 SUPERFAMILY SSF56796 3 359 1.44E-104 T 29-03-2018 CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 357 2.2E-91 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 Gene3D G3DSA:1.20.1090.10 181 382 4.5E-40 T 29-03-2018 CPU03_RS01805 a710898bb46e983f9bde81f128b19024 384 Gene3D G3DSA:3.40.50.1970 9 180 1.9E-42 T 29-03-2018 CPU03_RS11590 1c91cfa46a8ac9e6cca28b74c68400f4 110 Gene3D G3DSA:1.10.10.60 76 110 0.0065 T 29-03-2018 CPU03_RS11590 1c91cfa46a8ac9e6cca28b74c68400f4 110 SUPERFAMILY SSF46689 22 72 1.16E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS11590 1c91cfa46a8ac9e6cca28b74c68400f4 110 Pfam PF12833 Helix-turn-helix domain 44 110 8.3E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11590 1c91cfa46a8ac9e6cca28b74c68400f4 110 SMART SM00342 38 110 1.6E-10 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11590 1c91cfa46a8ac9e6cca28b74c68400f4 110 Gene3D G3DSA:1.10.10.60 17 75 1.0E-12 T 29-03-2018 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.22 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 944 9.2E-18 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF46589 884 947 2.67E-16 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF50677 191 365 1.7E-57 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF47323 642 899 2.62E-71 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 5.3E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 5.3E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 5.3E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 5.3E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 5.3E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Gene3D G3DSA:1.10.287.380 877 946 1.6E-24 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.5E-229 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Gene3D G3DSA:3.40.50.620 29 279 4.3E-50 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Gene3D G3DSA:1.10.730.10 548 817 1.1E-70 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF52374 364 571 1.27E-135 T 29-03-2018 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF52374 1 192 1.27E-135 T 29-03-2018 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 SUPERFAMILY SSF52374 609 641 1.27E-135 T 29-03-2018 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 5.9E-44 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CPU03_RS10040 e7634b790e962b0d96322c03e4933fcf 951 Gene3D G3DSA:3.40.50.620 290 547 1.8E-68 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS08790 455cc8eef587ecd087c0562342d15c7e 205 Pfam PF01380 SIS domain 42 167 1.9E-20 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS08790 455cc8eef587ecd087c0562342d15c7e 205 Gene3D G3DSA:3.40.50.10490 5 198 1.4E-41 T 29-03-2018 CPU03_RS08790 455cc8eef587ecd087c0562342d15c7e 205 SUPERFAMILY SSF53697 7 188 1.04E-36 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Gene3D G3DSA:2.30.42.10 249 352 1.9E-26 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 SUPERFAMILY SSF50156 370 435 4.21E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Pfam PF13365 Trypsin-like peptidase domain 76 212 4.9E-32 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 SUPERFAMILY SSF50156 209 334 2.5E-25 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Gene3D G3DSA:2.40.10.10 38 148 1.3E-31 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 436 1.2E-135 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 SUPERFAMILY SSF50494 39 247 2.24E-61 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Gene3D G3DSA:2.40.10.10 149 248 6.8E-37 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 183 200 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 291 303 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 86 98 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 5.1E-57 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Gene3D G3DSA:2.30.42.10 353 438 2.9E-9 T 29-03-2018 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 SMART SM00228 251 333 8.1E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 SMART SM00228 344 430 8.5E-5 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05285 c070b7b4756686d77bf0e3c1e12e9ba7 438 Pfam PF13180 PDZ domain 268 342 1.4E-14 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 SUPERFAMILY SSF52540 10 259 2.37E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 9.0E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 Pfam PF00005 ABC transporter 36 187 1.9E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 1.3E-25 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 Gene3D G3DSA:3.40.50.300 7 332 2.0E-77 T 29-03-2018 CPU03_RS08660 abf485f5b0ad02231cc69d7583b12f24 332 SMART SM00382 45 237 2.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PIRSF PIRSF001400 1 427 2.2E-176 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 427 2.8E-181 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 SMART SM01193 5 135 2.5E-84 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 Gene3D G3DSA:3.20.20.120 129 428 1.0E-90 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 SMART SM01192 140 427 2.3E-189 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 SUPERFAMILY SSF54826 4 138 5.16E-52 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 Gene3D G3DSA:3.30.390.10 4 128 9.8E-49 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 365 382 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 38 52 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 163 176 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 108 124 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 336 350 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 PRINTS PR00148 Enolase signature 313 324 1.0E-41 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 Pfam PF03952 Enolase, N-terminal domain 5 135 8.3E-55 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 SUPERFAMILY SSF51604 140 426 1.41E-112 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 Hamap MF_00318 Enolase [eno]. 3 413 41.308 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13600 d45767aa89e0b359051a46ed51d71ba4 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 426 4.2E-115 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS02340 f11094188d3b97a43f4d07120e0d4153 110 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 1.0E-38 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CPU03_RS02340 f11094188d3b97a43f4d07120e0d4153 110 PIRSF PIRSF028773 1 110 3.6E-49 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CPU03_RS02340 f11094188d3b97a43f4d07120e0d4153 110 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 24.651 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CPU03_RS02340 f11094188d3b97a43f4d07120e0d4153 110 Gene3D G3DSA:1.20.120.330 14 106 6.0E-4 T 29-03-2018 CPU03_RS02340 f11094188d3b97a43f4d07120e0d4153 110 Pfam PF04363 Protein of unknown function (DUF496) 9 100 1.2E-44 T 29-03-2018 IPR007458 Protein of unknown function DUF496 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 6.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 SUPERFAMILY SSF46894 145 208 3.33E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 Gene3D G3DSA:1.10.10.10 65 211 7.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13995 40c362bb88137a136d1b64b4bb561cda 214 SMART SM00421 151 208 5.9E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.7E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 3.7E-69 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.8E-39 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 SUPERFAMILY SSF51735 123 283 4.19E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 SUPERFAMILY SSF53223 1 122 7.77E-41 T 29-03-2018 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 Gene3D G3DSA:3.40.50.10860 11 140 1.3E-48 T 29-03-2018 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 Gene3D G3DSA:3.40.50.720 141 264 1.1E-37 T 29-03-2018 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS11895 b2e4c6ae9350b666dcd73956c173a4f3 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.144 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CPU03_RS03605 f28ec67c2260b6b319f024bce53ca4e0 231 Gene3D G3DSA:2.40.160.40 25 231 9.5E-34 T 29-03-2018 CPU03_RS03605 f28ec67c2260b6b319f024bce53ca4e0 231 SUPERFAMILY SSF56935 54 231 1.4E-11 T 29-03-2018 CPU03_RS03605 f28ec67c2260b6b319f024bce53ca4e0 231 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 21 231 1.0E-80 T 29-03-2018 IPR009331 Oligogalacturonate-specific porin CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 SMART SM00967 124 199 7.7E-9 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 SUPERFAMILY SSF55315 118 194 2.83E-9 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 Pfam PF00588 SpoU rRNA Methylase family 216 354 5.2E-30 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 125 197 6.7E-12 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 SUPERFAMILY SSF75217 211 361 1.9E-39 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 Gene3D G3DSA:3.40.1280.10 195 363 4.0E-39 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 Gene3D G3DSA:3.30.1330.30 111 194 9.3E-9 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like CPU03_RS05025 7c232842eb19d5f672a877219c0cafde 363 PIRSF PIRSF006280 1 363 1.3E-151 T 29-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 SUPERFAMILY SSF52374 3 280 4.38E-106 T 29-03-2018 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 2.5E-108 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 Gene3D G3DSA:3.30.1300.10 177 286 3.8E-28 T 29-03-2018 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 65 1.1E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 Gene3D G3DSA:3.40.50.620 1 176 4.1E-76 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.3E-100 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CPU03_RS04435 5658e04e384b33fb9e7a80b35cccbf9f 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.257 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CPU03_RS03105 60cf6534adcb7717f57a61477239ed6a 199 Gene3D G3DSA:2.60.120.10 9 110 8.9E-32 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS03105 60cf6534adcb7717f57a61477239ed6a 199 Gene3D G3DSA:2.60.120.10 111 196 3.2E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS03105 60cf6534adcb7717f57a61477239ed6a 199 SUPERFAMILY SSF51182 4 171 8.0E-43 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS03105 60cf6534adcb7717f57a61477239ed6a 199 Pfam PF05962 HutD 10 189 2.3E-47 T 29-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CPU03_RS15160 15a4425356229133e1172634de856132 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.2E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS15160 15a4425356229133e1172634de856132 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.2E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS15160 15a4425356229133e1172634de856132 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.2E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS15160 15a4425356229133e1172634de856132 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.357 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS15160 15a4425356229133e1172634de856132 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.6E-15 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS15160 15a4425356229133e1172634de856132 87 SUPERFAMILY SSF143800 1 81 9.81E-21 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15160 15a4425356229133e1172634de856132 87 Pfam PF01197 Ribosomal protein L31 1 79 4.4E-24 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 7.4E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 7.4E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 7.4E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 Gene3D G3DSA:3.40.50.720 2 260 1.0E-54 T 29-03-2018 CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 SUPERFAMILY SSF51735 2 238 2.8E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 Pfam PF00106 short chain dehydrogenase 3 189 1.8E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0073 T 29-03-2018 CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS11840 a21db63fe755e7d77e45f81a89e34907 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 4.0E-62 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.244 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 2.7E-61 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 Gene3D G3DSA:2.10.260.10 1 39 0.091 T 29-03-2018 CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 Gene3D G3DSA:2.10.260.10 81 130 1.9E-4 T 29-03-2018 CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 139 3.8E-20 T 29-03-2018 IPR020603 MraZ domain CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.5E-22 T 29-03-2018 IPR020603 MraZ domain CPU03_RS04715 85633bb48955ba5f95cdc808751f89cf 152 SUPERFAMILY SSF89447 1 137 5.65E-46 T 29-03-2018 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 Pfam PF01026 TatD related DNase 4 254 7.3E-73 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 SUPERFAMILY SSF51556 1 256 2.05E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 Gene3D G3DSA:3.20.20.140 1 262 8.3E-79 T 29-03-2018 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 7.9E-87 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 PIRSF PIRSF005902 1 258 1.4E-70 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS14620 707b50fe2958266ab16bbb562ec53dcb 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 Pfam PF12833 Helix-turn-helix domain 193 272 1.3E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 266 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 Gene3D G3DSA:1.10.10.60 154 226 1.4E-8 T 29-03-2018 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 Gene3D G3DSA:2.60.120.280 10 153 3.6E-13 T 29-03-2018 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 SUPERFAMILY SSF46689 223 274 2.37E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 SUPERFAMILY SSF46689 170 217 3.85E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 SMART SM00342 187 270 5.1E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 Gene3D G3DSA:1.10.10.60 227 276 9.1E-15 T 29-03-2018 CPU03_RS01840 5f23d01f2a59c916c40e79977769131d 283 Pfam PF12852 Cupin 2 156 1.6E-20 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 108 447 2.9E-124 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 Gene3D G3DSA:3.60.120.10 7 454 1.4E-154 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 SUPERFAMILY SSF56322 7 452 9.94E-145 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 Pfam PF00425 chorismate binding enzyme 191 444 2.2E-94 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 155 1.9E-27 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 PRINTS PR00095 Anthranilate synthase component I signature 306 319 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 PRINTS PR00095 Anthranilate synthase component I signature 386 400 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 PRINTS PR00095 Anthranilate synthase component I signature 292 305 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00040 a6ef5cdf59e34a12b1200e919c542d93 461 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.8E-18 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS03950 e66715f43ded8da99567bd2636393db8 570 Gene3D G3DSA:3.90.1150.10 410 567 1.1E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS03950 e66715f43ded8da99567bd2636393db8 570 Gene3D G3DSA:3.40.640.10 111 409 9.1E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS03950 e66715f43ded8da99567bd2636393db8 570 SUPERFAMILY SSF53383 74 565 8.66E-63 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS03950 e66715f43ded8da99567bd2636393db8 570 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 332 447 2.2E-6 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CPU03_RS03950 e66715f43ded8da99567bd2636393db8 570 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 73 283 2.1E-7 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CPU03_RS09280 303481a07d7fb15e92ad41ba6635ae79 394 SUPERFAMILY SSF103473 4 388 1.44E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS09280 303481a07d7fb15e92ad41ba6635ae79 394 Pfam PF07690 Major Facilitator Superfamily 14 322 1.1E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS09280 303481a07d7fb15e92ad41ba6635ae79 394 Gene3D G3DSA:1.20.1250.20 2 198 8.6E-20 T 29-03-2018 CPU03_RS09280 303481a07d7fb15e92ad41ba6635ae79 394 Gene3D G3DSA:1.20.1250.20 202 388 4.9E-12 T 29-03-2018 CPU03_RS09280 303481a07d7fb15e92ad41ba6635ae79 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.801 T 29-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA CPU03_RS01490 1c63d0560d19e71dde8965077bd1e411 380 Gene3D G3DSA:3.40.640.10 39 273 9.3E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS01490 1c63d0560d19e71dde8965077bd1e411 380 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 378 4.7E-126 T 29-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CPU03_RS01490 1c63d0560d19e71dde8965077bd1e411 380 Pfam PF00155 Aminotransferase class I and II 38 372 1.3E-24 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS01490 1c63d0560d19e71dde8965077bd1e411 380 SUPERFAMILY SSF53383 1 377 1.17E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS01490 1c63d0560d19e71dde8965077bd1e411 380 Gene3D G3DSA:3.90.1150.10 274 379 5.4E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 SUPERFAMILY SSF46689 7 56 3.04E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 SUPERFAMILY SSF55136 163 285 1.07E-12 T 29-03-2018 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 Gene3D G3DSA:1.10.10.60 2 57 2.4E-11 T 29-03-2018 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 Pfam PF12833 Helix-turn-helix domain 30 106 8.6E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 SUPERFAMILY SSF46689 57 111 2.15E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 Pfam PF06445 GyrI-like small molecule binding domain 129 284 2.2E-6 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 Gene3D G3DSA:1.10.10.60 58 121 7.0E-13 T 29-03-2018 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 SMART SM00342 21 104 7.0E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS03785 129e0b72dd608e2288f6744cd8edd283 285 Gene3D G3DSA:3.20.80.10 136 285 1.6E-8 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 8 363 4.8E-167 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 Gene3D G3DSA:4.10.480.10 230 307 3.1E-28 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 34 6.5E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 209 226 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 227 245 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 66 90 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 112 135 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 43 65 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 206 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 251 277 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 155 179 6.0E-68 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 222 306 7.3E-26 T 29-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 SUPERFAMILY SSF56770 47 305 4.19E-84 T 29-03-2018 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 58 202 1.4E-31 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 Gene3D G3DSA:3.40.50.700 41 229 2.7E-53 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13380 6551f1e71e0c41e102c05d4db1eb7304 374 PIRSF PIRSF000310 2 366 1.9E-129 T 29-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 Gene3D G3DSA:3.90.950.10 1 188 3.2E-66 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.6E-61 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.065 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 Pfam PF02545 Maf-like protein 4 184 1.2E-54 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 SUPERFAMILY SSF52972 2 184 1.7E-59 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS09900 5a67dab1b7dfe99bc2d6cdca085fa491 197 PIRSF PIRSF006305 1 191 1.6E-51 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 SUPERFAMILY SSF88697 4 72 2.98E-16 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 68.297 T 29-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 Gene3D G3DSA:3.30.750.80 74 180 1.4E-32 T 29-03-2018 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 SUPERFAMILY SSF53335 79 392 9.86E-71 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 Gene3D G3DSA:3.40.50.150 182 397 7.3E-37 T 29-03-2018 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 370 9.6E-27 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 SMART SM00359 3 88 8.8E-15 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS02020 5a26d2cfb45dc3f155a9d512e11b3c3e 397 Gene3D G3DSA:2.30.130.10 4 72 4.1E-26 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 Pfam PF13353 4Fe-4S single cluster domain 16 149 2.3E-18 T 29-03-2018 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 SUPERFAMILY SSF102114 23 216 9.81E-23 T 29-03-2018 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 PIRSF PIRSF000371 44 246 8.1E-46 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 PIRSF PIRSF000371 2 47 3.3E-10 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 Pfam PF04055 Radical SAM superfamily 24 179 3.7E-30 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 Gene3D G3DSA:3.80.30.10 68 245 1.2E-37 T 29-03-2018 CPU03_RS14215 f704cd76dd3dfa05af1f4a4953637895 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 240 3.2E-106 T 29-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CPU03_RS05840 3f38e6ff92668649ab6a5a3718fb21fe 305 Pfam PF00892 EamA-like transporter family 15 141 9.1E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS05840 3f38e6ff92668649ab6a5a3718fb21fe 305 Pfam PF00892 EamA-like transporter family 154 289 8.0E-24 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS05840 3f38e6ff92668649ab6a5a3718fb21fe 305 SUPERFAMILY SSF103481 44 145 1.96E-14 T 29-03-2018 CPU03_RS05840 3f38e6ff92668649ab6a5a3718fb21fe 305 SUPERFAMILY SSF103481 189 292 4.32E-15 T 29-03-2018 CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 Pfam PF00419 Fimbrial protein 26 176 2.1E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 SUPERFAMILY SSF49401 34 177 1.89E-15 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 Gene3D G3DSA:2.60.40.1090 23 177 1.4E-16 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 161 177 1.3E-10 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 29 52 1.3E-10 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS12060 5393e3d367ecd81418c832dfe343801e 177 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 144 160 1.3E-10 T 29-03-2018 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 CPU03_RS15025 3011000780b04e936a47d615bf9ac30c 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 104.416 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CPU03_RS15025 3011000780b04e936a47d615bf9ac30c 319 Pfam PF03186 CobD/Cbib protein 7 297 3.4E-102 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CPU03_RS15025 3011000780b04e936a47d615bf9ac30c 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 305 1.1E-72 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 Pfam PF11700 Vacuole effluxer Atg22 like 403 455 6.4E-6 T 29-03-2018 IPR024671 Autophagy-related protein 22-like CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 SUPERFAMILY SSF103473 19 449 9.16E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 439 7.0E-248 T 29-03-2018 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 Gene3D G3DSA:1.20.1250.20 13 247 1.1E-32 T 29-03-2018 CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 Pfam PF07690 Major Facilitator Superfamily 40 398 4.8E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15395 a46280ea225a5db132d69d92a5ec9c91 458 Gene3D G3DSA:1.20.1250.20 259 457 1.5E-23 T 29-03-2018 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Gene3D G3DSA:1.10.8.60 294 365 6.9E-28 T 29-03-2018 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 SMART SM00760 371 440 6.1E-45 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 SUPERFAMILY SSF48295 359 462 3.4E-38 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 461 6.1E-187 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 372 440 1.0E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 SMART SM00382 160 362 4.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Gene3D G3DSA:3.40.50.300 125 292 8.8E-22 T 29-03-2018 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 462 34.569 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 ProSitePatterns PS01008 DnaA protein signature. 421 440 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Gene3D G3DSA:1.10.1750.10 366 462 1.5E-36 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 421 440 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 161 181 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 193 207 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 225 239 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 286 1.2E-54 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Pfam PF11638 DnaA N-terminal domain 4 64 2.7E-20 T 29-03-2018 IPR024633 DnaA N-terminal domain CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 Pfam PF00308 Bacterial dnaA protein 129 345 1.8E-99 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CPU03_RS08205 b8a1039d6b9c4e563b8497b63ca75dca 463 SUPERFAMILY SSF52540 128 339 8.05E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 Pfam PF00589 Phage integrase family 117 284 2.0E-51 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 Gene3D G3DSA:1.10.150.130 1 116 4.7E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 298 56.864 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 SUPERFAMILY SSF47823 11 102 7.65E-12 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 93 6.8E-21 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 SUPERFAMILY SSF56349 113 296 2.8E-53 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 Gene3D G3DSA:1.10.443.10 117 292 3.3E-46 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS07355 3e1e6a6ac617e536f879f5a6408140ff 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 14 300 1.3E-106 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 3.1E-53 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.461 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 Gene3D G3DSA:3.30.190.20 150 228 8.2E-22 T 29-03-2018 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 PIRSF PIRSF002155 1 227 5.3E-78 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.6E-107 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 SUPERFAMILY SSF56808 6 225 6.02E-83 T 29-03-2018 IPR023674 Ribosomal protein L1-like CPU03_RS07080 45fad7519ad56d1ffff7ca93f0660a69 234 Gene3D G3DSA:3.40.50.790 68 149 2.8E-35 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 8.5E-84 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.1E-11 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 SUPERFAMILY SSF50249 16 101 1.05E-16 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 Gene3D G3DSA:2.40.50.140 7 108 2.6E-17 T 29-03-2018 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 2.4E-207 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 Gene3D G3DSA:3.30.930.10 128 462 6.9E-95 T 29-03-2018 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.153 T 29-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CPU03_RS02160 013096b58fb35be591b31a31b118c369 466 SUPERFAMILY SSF55681 100 465 1.67E-95 T 29-03-2018 CPU03_RS13420 197d5a7f093d58229e4caca56e63114a 442 Pfam PF00425 chorismate binding enzyme 176 429 6.1E-65 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CPU03_RS13420 197d5a7f093d58229e4caca56e63114a 442 SUPERFAMILY SSF56322 23 437 2.75E-97 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS13420 197d5a7f093d58229e4caca56e63114a 442 Gene3D G3DSA:3.60.120.10 6 440 1.7E-97 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS13420 197d5a7f093d58229e4caca56e63114a 442 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 92 436 7.5E-96 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CPU03_RS13420 197d5a7f093d58229e4caca56e63114a 442 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 439 29.945 T 29-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 SUPERFAMILY SSF52540 286 383 9.11E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 SUPERFAMILY SSF52540 439 610 9.11E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 15 609 51.051 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Pfam PF13538 UvrD-like helicase C-terminal domain 540 586 5.1E-16 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Gene3D G3DSA:3.40.50.300 114 360 2.9E-54 T 29-03-2018 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 SUPERFAMILY SSF52540 8 365 6.0E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Gene3D G3DSA:3.40.50.300 370 475 3.4E-11 T 29-03-2018 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Gene3D G3DSA:3.40.50.300 476 600 1.1E-24 T 29-03-2018 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 Pfam PF13604 AAA domain 161 322 1.5E-31 T 29-03-2018 CPU03_RS04310 e7c52e10c64487cdf5978af1854af1c0 617 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 7 611 1.0E-186 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CPU03_RS15475 de447eae489cf1149e61be93081f2e8e 462 Pfam PF11329 Protein of unknown function (DUF3131) 55 425 7.4E-97 T 29-03-2018 IPR021478 Protein of unknown function DUF3131 CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 SUPERFAMILY SSF52833 1 84 2.38E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 197 1.3E-10 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 Gene3D G3DSA:3.40.30.10 1 93 1.5E-25 T 29-03-2018 CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 4.2E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 Gene3D G3DSA:1.20.1050.10 94 143 7.0E-13 T 29-03-2018 CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 Gene3D G3DSA:1.20.1050.10 144 201 5.6E-15 T 29-03-2018 CPU03_RS13215 3a3f7d645f2174842c59261f3efbb53c 208 SUPERFAMILY SSF47616 78 204 9.14E-36 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CPU03_RS13140 5f24d9a139a749789e5e33ca5a974634 199 SUPERFAMILY SSF52833 30 192 1.71E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13140 5f24d9a139a749789e5e33ca5a974634 199 Pfam PF13462 Thioredoxin 36 192 4.1E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13140 5f24d9a139a749789e5e33ca5a974634 199 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS13140 5f24d9a139a749789e5e33ca5a974634 199 Gene3D G3DSA:3.40.30.10 28 199 1.8E-37 T 29-03-2018 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 Gene3D G3DSA:3.30.160.20 209 291 3.0E-33 T 29-03-2018 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 Pfam PF00472 RF-1 domain 216 321 1.6E-41 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.5E-176 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 Pfam PF03462 PCRF domain 12 203 5.2E-76 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 SUPERFAMILY SSF75620 12 353 2.88E-139 T 29-03-2018 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 SMART SM00937 63 178 1.9E-71 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 Gene3D G3DSA:1.20.58.410 4 95 5.0E-21 T 29-03-2018 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.437 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CPU03_RS01605 4b1400a48912474d7bd0a034f7e0bfa6 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 SUPERFAMILY SSF74731 3 117 2.49E-50 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.076 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 Pfam PF00453 Ribosomal protein L20 3 109 5.6E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.7E-53 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 29-03-2018 CPU03_RS16795 3e5e7495ff63069a4cf7dc9f26eb48a1 118 Gene3D G3DSA:1.10.1900.20 55 116 1.7E-29 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 104 1.6E-31 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.365 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 4.5E-180 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 Gene3D G3DSA:3.40.50.720 1 164 1.2E-62 T 29-03-2018 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 8.8E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 8.8E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 8.8E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 8.8E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 8.8E-29 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 SUPERFAMILY SSF55347 155 317 2.89E-57 T 29-03-2018 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 SUPERFAMILY SSF51735 1 178 2.07E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 PIRSF PIRSF000149 1 338 5.8E-129 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 SMART SM00846 3 155 4.7E-75 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 Gene3D G3DSA:3.30.360.10 165 318 1.8E-51 T 29-03-2018 CPU03_RS10530 14ab8807a444262c36e4a19afcbebf23 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.0E-54 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 SUPERFAMILY SSF117281 47 170 2.09E-28 T 29-03-2018 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 SUPERFAMILY SSF117281 202 372 2.09E-28 T 29-03-2018 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 Gene3D G3DSA:2.120.10.80 17 175 2.4E-20 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 Gene3D G3DSA:2.120.10.80 186 382 1.3E-12 T 29-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 Pfam PF13964 Kelch motif 83 134 2.4E-8 T 29-03-2018 CPU03_RS03600 eb3d5628349fcf496ad2443181fc0b77 384 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 30 376 5.3E-131 T 29-03-2018 IPR019936 Mutatrotase, YjhT-like CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82693 52 145 4.71E-22 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82866 804 1030 2.35E-45 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:1.20.1640.10 279 504 5.6E-46 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82714 195 278 3.27E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:1.20.1640.10 818 1038 1.9E-36 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82866 302 501 3.01E-46 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 22 46 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 475 498 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 50 68 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 369 390 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 342 365 4.1E-81 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82693 568 664 1.13E-13 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82714 722 804 1.14E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:3.30.70.1430 570 669 1.7E-10 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82693 149 194 2.62E-21 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 SUPERFAMILY SSF82693 280 336 2.62E-21 T 29-03-2018 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:3.30.2090.10 720 806 7.2E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Pfam PF00873 AcrB/AcrD/AcrF family 18 1025 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:3.30.2090.10 193 278 7.5E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CPU03_RS03015 b3fa854c1f0346ce693bea25f698142d 1043 Gene3D G3DSA:3.30.70.1430 52 151 3.1E-22 T 29-03-2018 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 210 40.554 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 208 2.9E-72 T 29-03-2018 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 209 6.4E-84 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 Gene3D G3DSA:3.40.50.150 4 208 1.1E-43 T 29-03-2018 CPU03_RS10960 5ae1832b0d66bace0b6541eb987a532b 210 SUPERFAMILY SSF53335 11 207 1.17E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS10590 3abd16e98b87674bf865b3048ada846e 189 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 187 33.837 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CPU03_RS10590 3abd16e98b87674bf865b3048ada846e 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 167 2.9E-16 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CPU03_RS10590 3abd16e98b87674bf865b3048ada846e 189 SUPERFAMILY SSF101327 9 176 9.02E-50 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CPU03_RS10590 3abd16e98b87674bf865b3048ada846e 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 3.4E-38 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 CPU03_RS14485 de479c5c54ac14b55c91ac1cec576c1f 252 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 8 251 3.2E-99 T 29-03-2018 IPR005226 UPF0014 family CPU03_RS14485 de479c5c54ac14b55c91ac1cec576c1f 252 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 1.2E-82 T 29-03-2018 IPR005226 UPF0014 family CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 8.1E-119 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 2.7E-27 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-13 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 SUPERFAMILY SSF117143 93 222 1.83E-35 T 29-03-2018 CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.5E-49 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CPU03_RS02210 df60c95f0118c6028d96e97bb71052ff 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 3.5E-30 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 PIRSF PIRSF006488 1 80 1.9E-24 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 65 1.5E-23 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 Pfam PF02609 Exonuclease VII small subunit 11 62 2.7E-21 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 43 8.0E-12 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 Gene3D G3DSA:1.10.287.1040 8 75 1.2E-25 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 SUPERFAMILY SSF116842 3 70 1.7E-21 T 29-03-2018 CPU03_RS03420 606ed92af250b69020bd0c70d491696e 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.815 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 SUPERFAMILY SSF56601 369 391 1.22E-102 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 SUPERFAMILY SSF56601 419 782 1.22E-102 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Gene3D G3DSA:1.10.3810.10 206 404 3.6E-61 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Pfam PF00905 Penicillin binding protein transpeptidase domain 480 720 1.5E-21 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Pfam PF00912 Transglycosylase 216 386 6.3E-55 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 75 798 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 PIRSF PIRSF002799 46 827 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Gene3D G3DSA:1.20.5.100 61 102 3.9E-14 T 29-03-2018 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Gene3D G3DSA:3.30.2060.10 119 205 1.3E-25 T 29-03-2018 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 86 7.7E-24 T 29-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Gene3D G3DSA:3.40.710.10 409 787 4.0E-94 T 29-03-2018 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 Pfam PF14814 Bifunctional transglycosylase second domain 120 204 1.0E-26 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04380 2a022f3b31cca4adf4f91ccb67cd5ada 828 SUPERFAMILY SSF53955 204 410 4.22E-66 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 SUPERFAMILY SSF53474 14 256 7.38E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.4E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 1.4E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 1.4E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 1.4E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 Pfam PF12697 Alpha/beta hydrolase family 22 247 1.4E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS12415 00f92fcda06ea46529ecfc8d3d9cd9c8 263 Gene3D G3DSA:3.40.50.1820 4 257 7.8E-52 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS00740 26e009f2a7c49690bba84a0c373df8ff 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 49.292 T 29-03-2018 IPR022913 Multidrug resistance protein MdtK CPU03_RS00740 26e009f2a7c49690bba84a0c373df8ff 457 Pfam PF01554 MatE 244 405 1.9E-38 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS00740 26e009f2a7c49690bba84a0c373df8ff 457 Pfam PF01554 MatE 17 177 1.5E-38 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS00740 26e009f2a7c49690bba84a0c373df8ff 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 3.2E-116 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS00740 26e009f2a7c49690bba84a0c373df8ff 457 PIRSF PIRSF006603 8 454 6.4E-59 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 Gene3D G3DSA:1.10.240.10 191 313 2.5E-32 T 29-03-2018 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 4.6E-118 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 SUPERFAMILY SSF52374 5 330 9.09E-99 T 29-03-2018 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 6.6E-88 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 Gene3D G3DSA:3.40.50.620 1 190 4.2E-73 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.8E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.8E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.8E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.8E-29 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS09260 bd2bfc5f2e2a5fd2912d14cc87138989 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.513 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CPU03_RS00950 e1bb238ba43b5121cd1e9a9562763252 212 SUPERFAMILY SSF56925 23 212 1.96E-30 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS00950 e1bb238ba43b5121cd1e9a9562763252 212 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 204 212 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS00950 e1bb238ba43b5121cd1e9a9562763252 212 Gene3D G3DSA:2.40.160.20 22 212 2.9E-35 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS00950 e1bb238ba43b5121cd1e9a9562763252 212 Pfam PF03922 OmpW family 23 212 2.7E-62 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 SUPERFAMILY SSF46785 2 103 3.37E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Gene3D G3DSA:2.40.50.100 108 183 1.5E-18 T 29-03-2018 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 SUPERFAMILY SSF50331 172 259 1.45E-15 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 SUPERFAMILY SSF50331 122 191 5.1E-18 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Gene3D G3DSA:1.10.10.10 1 107 3.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Gene3D G3DSA:2.40.50.100 184 253 5.8E-17 T 29-03-2018 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 7.3E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.1E-25 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 107 5.0E-36 T 29-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 PIRSF PIRSF005763 1 263 1.4E-94 T 29-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Pfam PF03459 TOBE domain 124 187 2.2E-13 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CPU03_RS12675 fb9be93c06d1e82cd8771fef60a92057 263 Pfam PF03459 TOBE domain 198 259 1.8E-11 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 492 3.6E-92 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 399 420 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 329 348 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 2.0E-44 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 SUPERFAMILY SSF55486 2 493 3.42E-118 T 29-03-2018 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 PIRSF PIRSF006615 1 497 1.4E-190 T 29-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CPU03_RS16575 21a814004337c591adf9c80a66567444 504 Gene3D G3DSA:1.10.1370.10 38 501 2.2E-29 T 29-03-2018 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 Pfam PF01311 Bacterial export proteins, family 1 15 245 1.3E-65 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 252 4.7E-72 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.1E-30 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.1E-30 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.1E-30 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CPU03_RS14365 511754e7855745346c906cdcaf824ddd 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.1E-30 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CPU03_RS16200 80aa42c70d70a9c0abaf2c1f8bd8af02 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 319 7.7E-59 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CPU03_RS16200 80aa42c70d70a9c0abaf2c1f8bd8af02 434 SUPERFAMILY SSF111369 124 324 1.15E-12 T 29-03-2018 CPU03_RS16200 80aa42c70d70a9c0abaf2c1f8bd8af02 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 203 396 1.2E-35 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS16200 80aa42c70d70a9c0abaf2c1f8bd8af02 434 Gene3D G3DSA:2.40.50.100 127 245 2.8E-8 T 29-03-2018 CPU03_RS08455 8b4648b70cd29f1e9a8f4d5be6bb0c1e 394 Gene3D G3DSA:1.20.1250.20 197 392 1.0E-6 T 29-03-2018 CPU03_RS08455 8b4648b70cd29f1e9a8f4d5be6bb0c1e 394 Pfam PF07690 Major Facilitator Superfamily 14 348 4.9E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS08455 8b4648b70cd29f1e9a8f4d5be6bb0c1e 394 Gene3D G3DSA:1.20.1250.20 1 196 8.2E-28 T 29-03-2018 CPU03_RS08455 8b4648b70cd29f1e9a8f4d5be6bb0c1e 394 SUPERFAMILY SSF103473 7 385 7.06E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 7.7E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 7.7E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 7.7E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.7E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 Gene3D G3DSA:3.40.50.1000 1 32 0.1 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 Gene3D G3DSA:3.40.50.1000 72 205 1.1E-25 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 Gene3D G3DSA:1.10.150.240 33 71 5.7E-17 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 SUPERFAMILY SSF56784 3 203 1.13E-42 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 181 1.6E-16 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS13260 1850e23682d8e551423a0d27bd02ae27 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.4E-24 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS13645 0bbf32ce30733f3f30a138afa7e256f0 80 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 80 2.1E-33 T 29-03-2018 IPR019620 Putative metal-binding protein CPU03_RS13645 0bbf32ce30733f3f30a138afa7e256f0 80 Pfam PF10678 Protein of unknown function (DUF2492) 4 79 6.2E-34 T 29-03-2018 IPR019620 Putative metal-binding protein CPU03_RS07195 94b53c98c2de6f01ab1de599dd85057f 241 Gene3D G3DSA:3.40.50.880 1 232 3.2E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS07195 94b53c98c2de6f01ab1de599dd85057f 241 SUPERFAMILY SSF52317 1 221 4.12E-32 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS07195 94b53c98c2de6f01ab1de599dd85057f 241 Pfam PF03575 Peptidase family S51 3 205 2.2E-45 T 29-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CPU03_RS04830 2f0135744fa7c3b772c7f12ed7dea89d 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 30.713 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG CPU03_RS04830 2f0135744fa7c3b772c7f12ed7dea89d 125 Pfam PF04379 ApaG domain 18 102 3.7E-31 T 29-03-2018 IPR007474 ApaG domain CPU03_RS04830 2f0135744fa7c3b772c7f12ed7dea89d 125 SUPERFAMILY SSF110069 4 125 1.31E-46 T 29-03-2018 IPR007474 ApaG domain CPU03_RS04830 2f0135744fa7c3b772c7f12ed7dea89d 125 Gene3D G3DSA:2.60.40.1470 3 125 3.1E-41 T 29-03-2018 IPR007474 ApaG domain CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 Gene3D G3DSA:3.40.366.10 188 309 6.1E-34 T 29-03-2018 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.7E-48 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 Gene3D G3DSA:3.40.366.10 3 143 1.8E-40 T 29-03-2018 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 Pfam PF00698 Acyl transferase domain 7 290 7.6E-39 T 29-03-2018 IPR014043 Acyl transferase CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 SUPERFAMILY SSF55048 128 197 4.32E-18 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.8E-131 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 SUPERFAMILY SSF52151 4 122 9.42E-83 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 SUPERFAMILY SSF52151 190 308 9.42E-83 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 Gene3D G3DSA:3.30.70.250 144 187 3.2E-22 T 29-03-2018 CPU03_RS14580 b8703698cbf774c029d2859452e62b95 309 PIRSF PIRSF000446 1 309 2.3E-140 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 SUPERFAMILY SSF50104 1 64 1.14E-10 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.1E-17 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 SMART SM01185 69 125 3.9E-16 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Gene3D G3DSA:2.40.50.140 133 188 1.7E-19 T 29-03-2018 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 SMART SM00841 133 188 5.1E-25 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Gene3D G3DSA:2.40.50.140 67 126 9.0E-16 T 29-03-2018 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 3.1E-97 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.679 T 29-03-2018 IPR011897 Translation elongation factor P-like, YeiP CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Gene3D G3DSA:2.30.30.30 2 63 3.4E-15 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 3.5E-15 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 PIRSF PIRSF005901 1 190 6.4E-60 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 SUPERFAMILY SSF50249 132 189 4.45E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 SUPERFAMILY SSF50249 67 130 1.33E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS13755 a9d447357b08577dfb218591a38b31f8 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 125 1.5E-14 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 544 1.3E-32 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Gene3D G3DSA:2.60.40.1730 15 194 1.1E-28 T 29-03-2018 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 SUPERFAMILY SSF55486 204 450 8.61E-77 T 29-03-2018 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 870 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Pfam PF01433 Peptidase family M1 domain 208 439 4.8E-60 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Gene3D G3DSA:1.25.50.10 547 871 9.2E-123 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Gene3D G3DSA:1.10.390.10 280 443 2.3E-52 T 29-03-2018 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 5.8E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 5.8E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 5.8E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 5.8E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 5.8E-9 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 SUPERFAMILY SSF63737 1 193 4.84E-46 T 29-03-2018 CPU03_RS02150 cb44d91762ac830b25ab4e1d36f3a2fa 872 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 871 1.5E-118 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 Pfam PF03023 MviN-like protein 28 477 2.7E-153 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.341 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 7.2E-167 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PIRSF PIRSF002869 1 511 6.5E-175 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS01505 5351b9b3e080a6333ed12fa83f2bd14b 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.7E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.7E-71 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.86 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 SUPERFAMILY SSF50249 3 123 9.42E-52 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 4.1E-43 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 Gene3D G3DSA:2.40.50.140 1 124 2.2E-64 T 29-03-2018 CPU03_RS09355 d1273d8649c5f39b87945bc15e4b9765 124 PIRSF PIRSF002133 1 124 2.3E-54 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 PIRSF PIRSF001365 1 293 3.0E-93 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 3.1E-117 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 2.5E-114 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 Gene3D G3DSA:3.20.20.70 1 293 2.7E-90 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 SUPERFAMILY SSF51569 1 292 2.09E-98 T 29-03-2018 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.1E-34 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.1E-34 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.1E-34 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.1E-34 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 65.5 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS02890 e89aaa6250c31dacc4ce2b858d2d5fc1 293 SMART SM01130 1 291 1.3E-142 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 Gene3D G3DSA:3.30.63.10 50 83 8.9E-28 T 29-03-2018 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 SUPERFAMILY SSF52540 3 189 2.95E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 Pfam PF00625 Guanylate kinase 5 185 6.4E-66 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.944 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 SMART SM00072 3 187 6.1E-79 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 8.4E-76 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 Gene3D G3DSA:3.40.50.300 3 49 8.0E-4 T 29-03-2018 CPU03_RS08345 b71a20ed73166dad8b517cd28fd79578 207 Gene3D G3DSA:3.40.50.300 84 187 3.0E-35 T 29-03-2018 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Pfam PF01476 LysM domain 406 448 2.2E-11 T 29-03-2018 IPR018392 LysM domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Pfam PF01476 LysM domain 349 390 5.0E-13 T 29-03-2018 IPR018392 LysM domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 126 154 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Gene3D G3DSA:3.10.350.10 402 455 1.9E-15 T 29-03-2018 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Gene3D G3DSA:3.10.350.10 341 401 1.1E-13 T 29-03-2018 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Pfam PF01464 Transglycosylase SLT domain 108 218 4.0E-27 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 Gene3D G3DSA:1.10.530.10 19 251 1.3E-33 T 29-03-2018 CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 SUPERFAMILY SSF54106 348 390 6.54E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 SUPERFAMILY SSF53955 104 256 4.69E-43 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 SMART SM00257 405 450 1.8E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 SMART SM00257 348 391 2.5E-14 T 29-03-2018 IPR018392 LysM domain CPU03_RS11230 a4e08cf4ee0240f9fb0be23b5956f43c 459 SUPERFAMILY SSF54106 403 450 3.92E-10 T 29-03-2018 IPR018392 LysM domain CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 7.3E-20 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 PIRSF PIRSF003128 1 553 5.8E-156 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.5E-166 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 Gene3D G3DSA:3.40.50.300 1 233 1.8E-27 T 29-03-2018 CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 Gene3D G3DSA:3.40.50.300 234 533 1.6E-20 T 29-03-2018 CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 SUPERFAMILY SSF52540 1 199 4.22E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 SUPERFAMILY SSF52540 287 331 4.22E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11690 837f8d3be288db8951c1c67bd61bf01a 553 SUPERFAMILY SSF52540 360 510 4.22E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10435 6357c2976742d7131693796e5d25a061 371 Pfam PF00962 Adenosine/AMP deaminase 16 337 5.3E-35 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CPU03_RS10435 6357c2976742d7131693796e5d25a061 371 Gene3D G3DSA:3.20.20.140 3 366 5.8E-62 T 29-03-2018 CPU03_RS10435 6357c2976742d7131693796e5d25a061 371 SUPERFAMILY SSF51556 11 357 3.4E-54 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 29-03-2018 IPR019808 Histidine triad, conserved site CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 SUPERFAMILY SSF54197 2 112 3.69E-37 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 Pfam PF01230 HIT domain 12 109 4.5E-31 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 PRINTS PR00332 Histidine triad family signature 95 105 6.9E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 PRINTS PR00332 Histidine triad family signature 6 22 6.9E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 PRINTS PR00332 Histidine triad family signature 27 45 6.9E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS00580 3809fe854e75f3582e5605ef8ea4e4e2 116 Gene3D G3DSA:3.30.428.10 1 110 2.6E-31 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 Gene3D G3DSA:1.10.10.10 2 90 4.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 SUPERFAMILY SSF46785 5 113 1.01E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 Gene3D G3DSA:3.40.190.10 91 177 1.0E-10 T 29-03-2018 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 Pfam PF03466 LysR substrate binding domain 91 295 4.0E-34 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 SUPERFAMILY SSF53850 91 296 1.59E-37 T 29-03-2018 CPU03_RS02290 454328b033f0f07099d1c0c9df6409a5 304 Gene3D G3DSA:3.40.190.10 178 265 1.4E-21 T 29-03-2018 CPU03_RS06345 e2527c1fef6135cb1bbfa48ce61b9dae 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.229 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 CPU03_RS06345 e2527c1fef6135cb1bbfa48ce61b9dae 181 Pfam PF00929 Exonuclease 9 170 4.6E-37 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS06345 e2527c1fef6135cb1bbfa48ce61b9dae 181 SUPERFAMILY SSF53098 3 180 1.17E-47 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS06345 e2527c1fef6135cb1bbfa48ce61b9dae 181 SMART SM00479 7 180 9.5E-24 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS06345 e2527c1fef6135cb1bbfa48ce61b9dae 181 Gene3D G3DSA:3.30.420.10 2 181 1.1E-26 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.517 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 SUPERFAMILY SSF53335 4 204 6.44E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 PIRSF PIRSF003078 1 206 4.8E-63 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 204 9.6E-57 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 Gene3D G3DSA:3.40.50.150 1 206 2.0E-37 T 29-03-2018 CPU03_RS08060 158b3496cd52d00500eacbde8e6ff3e8 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 1.5E-61 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CPU03_RS01810 3b18e7ec166218cc03f2301acf80cda2 139 Pfam PF00582 Universal stress protein family 3 136 4.6E-11 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS01810 3b18e7ec166218cc03f2301acf80cda2 139 SUPERFAMILY SSF52402 3 137 2.18E-19 T 29-03-2018 CPU03_RS01810 3b18e7ec166218cc03f2301acf80cda2 139 Gene3D G3DSA:3.40.50.620 2 138 6.2E-13 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS01810 3b18e7ec166218cc03f2301acf80cda2 139 PIRSF PIRSF006276 1 139 6.0E-31 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 Pfam PF01612 3'-5' exonuclease 4 172 5.7E-39 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 SUPERFAMILY SSF53098 3 211 4.64E-66 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 Pfam PF00570 HRDC domain 214 280 7.1E-17 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 SMART SM00474 4 172 7.0E-47 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 SMART SM00341 211 290 6.0E-16 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 TIGRFAM TIGR01388 rnd: ribonuclease D 6 370 4.7E-140 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 SUPERFAMILY SSF47819 194 300 8.29E-29 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 SUPERFAMILY SSF47819 297 370 1.44E-18 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 Gene3D G3DSA:3.30.420.10 2 195 7.0E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 Hamap MF_01899 Ribonuclease D [rnd]. 4 370 45.929 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CPU03_RS01320 1e771a4a38c9acfa66169f853231d821 372 Gene3D G3DSA:1.10.150.80 196 294 2.6E-20 T 29-03-2018 CPU03_RS02075 c85e864dcc86b62879f59e0139d03409 152 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.925 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CPU03_RS02075 c85e864dcc86b62879f59e0139d03409 152 Gene3D G3DSA:1.10.3990.20 78 148 3.9E-5 T 29-03-2018 CPU03_RS02075 c85e864dcc86b62879f59e0139d03409 152 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 5.7E-32 T 29-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CPU03_RS02075 c85e864dcc86b62879f59e0139d03409 152 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-56 T 29-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CPU03_RS02075 c85e864dcc86b62879f59e0139d03409 152 Pfam PF06303 MatP N-terminal domain 2 85 2.6E-43 T 29-03-2018 IPR035087 MatP, N-terminal CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 29-03-2018 CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 6.5E-59 T 29-03-2018 IPR000150 Cof family GO:0016787 CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 SUPERFAMILY SSF56784 1 271 9.31E-61 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 3.8E-58 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 Gene3D G3DSA:3.40.50.1000 122 271 1.6E-18 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 1.6E-19 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CPU03_RS12705 2cc57e8afeac328dffe932733543bb07 272 Gene3D G3DSA:3.40.50.1000 3 113 1.1E-17 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-29 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 SUPERFAMILY SSF55282 4 179 1.7E-79 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 PIRSF PIRSF002161 1 179 4.9E-67 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.5E-41 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.924 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 Gene3D G3DSA:3.30.1440.10 1 179 3.5E-81 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09440 51d06d7bd89d6d832a68843118bf9945 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 SMART SM00304 216 268 8.3E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Pfam PF02203 Tar ligand binding domain homologue 1 174 1.0E-53 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 SUPERFAMILY SSF47170 25 182 1.96E-46 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 SMART SM00319 44 182 1.4E-48 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 1.8E-58 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 SUPERFAMILY SSF58104 236 517 2.62E-77 T 29-03-2018 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Gene3D G3DSA:1.10.287.1060 235 327 0.012 T 29-03-2018 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 7.7E-89 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Gene3D G3DSA:1.20.120.30 23 190 1.9E-39 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Gene3D G3DSA:1.10.287.950 328 520 5.8E-50 T 29-03-2018 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 29-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 SMART SM00283 269 516 1.1E-100 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS01770 3ba755859d5ed5689d70cfb87decd610 558 Pfam PF00672 HAMP domain 216 264 4.0E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 Pfam PF07694 5TMR of 5TMR-LYT 30 193 1.2E-39 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 SMART SM00387 452 554 6.8E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 Gene3D G3DSA:3.30.450.40 189 362 7.7E-7 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 Gene3D G3DSA:3.30.565.10 370 553 1.4E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 552 2.1E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 Pfam PF06580 Histidine kinase 361 439 1.7E-26 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 SUPERFAMILY SSF55781 227 353 3.68E-8 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10295 27103bd6bd678302bd0f41b04d3ce780 563 SUPERFAMILY SSF55874 415 551 2.1E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 Pfam PF03466 LysR substrate binding domain 95 287 4.8E-30 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 Gene3D G3DSA:1.10.10.10 8 93 2.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.4E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 Gene3D G3DSA:3.40.190.10 99 184 2.4E-14 T 29-03-2018 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 Gene3D G3DSA:3.40.190.10 185 263 1.3E-12 T 29-03-2018 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 SUPERFAMILY SSF53850 96 288 3.72E-29 T 29-03-2018 CPU03_RS13300 beef91e6cfdf23dd4371b6eaa8f2730a 309 SUPERFAMILY SSF46785 9 119 6.12E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00155 7d529e14d5a0c80bcd6cd3a0c533aa43 137 SUPERFAMILY SSF143749 5 135 7.06E-26 T 29-03-2018 IPR009312 Minor tail protein U-like CPU03_RS00155 7d529e14d5a0c80bcd6cd3a0c533aa43 137 Pfam PF06141 Phage minor tail protein U 5 134 4.0E-23 T 29-03-2018 IPR009312 Minor tail protein U-like CPU03_RS14950 e5c9cf19db9e729be8fbb66dee12d3f3 419 Pfam PF07670 Nucleoside recognition 94 189 2.5E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS14950 e5c9cf19db9e729be8fbb66dee12d3f3 419 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 7 80 2.4E-22 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CPU03_RS14950 e5c9cf19db9e729be8fbb66dee12d3f3 419 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 415 1.6E-136 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CPU03_RS14950 e5c9cf19db9e729be8fbb66dee12d3f3 419 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 196 415 1.8E-65 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 29-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Pfam PF14815 NUDIX domain 235 344 1.9E-23 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 SMART SM00525 192 212 5.9E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 168 5.5E-22 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 SUPERFAMILY SSF55811 221 345 7.48E-27 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 SMART SM00478 40 191 2.6E-48 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Gene3D G3DSA:3.90.79.10 225 352 1.0E-9 T 29-03-2018 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 274 1.6E-125 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 5.0E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Gene3D G3DSA:1.10.340.30 22 119 2.0E-32 T 29-03-2018 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 SUPERFAMILY SSF48150 4 226 5.81E-78 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Pfam PF00633 Helix-hairpin-helix motif 101 128 1.9E-6 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CPU03_RS06660 30832636d54abe4f70a411b1d1fa84d2 362 Gene3D G3DSA:1.10.1670.10 120 224 1.1E-34 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Gene3D G3DSA:1.10.10.10 89 137 5.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Pfam PF04539 Sigma-70 region 3 99 157 5.6E-13 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PIRSF PIRSF000770 1 240 3.2E-37 T 29-03-2018 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Gene3D G3DSA:1.10.1740.10 2 86 4.6E-21 T 29-03-2018 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 SUPERFAMILY SSF88946 5 88 2.98E-23 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Gene3D G3DSA:1.10.10.10 146 239 3.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 SUPERFAMILY SSF88659 89 156 7.85E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Pfam PF04542 Sigma-70 region 2 16 88 1.5E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 SUPERFAMILY SSF88659 156 238 1.01E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 3.9E-84 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Pfam PF04545 Sigma-70, region 4 185 233 9.9E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 3.7E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 3.7E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 3.7E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 3.7E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 3.7E-13 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 236 1.7E-32 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS14465 e89c315d3bb02decf7a72f96ad42351e 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.01 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS04580 05081f236a46b292d4385e06258eab59 195 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 166 2.4E-27 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS04580 05081f236a46b292d4385e06258eab59 195 SUPERFAMILY SSF55846 2 180 3.8E-65 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS04580 05081f236a46b292d4385e06258eab59 195 Gene3D G3DSA:3.40.80.10 1 186 5.1E-52 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS04580 05081f236a46b292d4385e06258eab59 195 SMART SM00644 16 166 1.5E-47 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 SMART SM00052 392 631 1.4E-20 T 29-03-2018 IPR001633 EAL domain CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 SUPERFAMILY SSF55073 230 381 4.71E-15 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 8.8E-31 T 29-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 Pfam PF00563 EAL domain 400 626 7.2E-36 T 29-03-2018 IPR001633 EAL domain CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 SUPERFAMILY SSF141868 400 629 2.35E-29 T 29-03-2018 IPR001633 EAL domain CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 SMART SM00267 213 382 7.4E-11 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 Gene3D G3DSA:3.20.20.450 386 631 1.8E-37 T 29-03-2018 IPR001633 EAL domain CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 Gene3D G3DSA:3.30.70.270 214 383 1.0E-18 T 29-03-2018 CPU03_RS09880 036c947719ab9b8952be897ddca3296a 631 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 377 2.1E-17 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 Gene3D G3DSA:3.40.30.10 93 238 8.1E-27 T 29-03-2018 CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 SUPERFAMILY SSF52833 90 228 2.75E-39 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 SUPERFAMILY SSF54423 22 77 4.05E-17 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 Pfam PF13098 Thioredoxin-like domain 105 227 4.2E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 1.0E-14 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 Gene3D G3DSA:3.10.450.70 19 78 3.4E-21 T 29-03-2018 CPU03_RS10670 3c31bb4ca5df282b7f5e5c20adcf5ec1 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS05435 cad550f8350072289c86f5912abf526c 263 Gene3D G3DSA:3.20.20.140 5 263 7.3E-75 T 29-03-2018 CPU03_RS05435 cad550f8350072289c86f5912abf526c 263 SUPERFAMILY SSF51556 6 259 1.89E-74 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS05435 cad550f8350072289c86f5912abf526c 263 PIRSF PIRSF005902 1 262 7.3E-67 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS05435 cad550f8350072289c86f5912abf526c 263 Pfam PF01026 TatD related DNase 7 258 2.6E-63 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS05435 cad550f8350072289c86f5912abf526c 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 6 14 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CPU03_RS11945 7151c73ea4ecb6ad37c84093812a621b 507 Pfam PF03895 YadA-like membrane anchor domain 448 507 1.2E-10 T 29-03-2018 IPR005594 YadA-like, C-terminal CPU03_RS11945 7151c73ea4ecb6ad37c84093812a621b 507 Gene3D G3DSA:3.30.420.10 32 179 0.0067 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS11945 7151c73ea4ecb6ad37c84093812a621b 507 SUPERFAMILY SSF54523 417 507 3.92E-17 T 29-03-2018 CPU03_RS11945 7151c73ea4ecb6ad37c84093812a621b 507 Gene3D G3DSA:3.30.1300.30 379 507 4.4E-22 T 29-03-2018 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.0E-143 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SUPERFAMILY SSF49493 211 264 9.94E-23 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SUPERFAMILY SSF49493 112 167 9.94E-23 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Gene3D G3DSA:2.60.260.20 253 364 7.3E-27 T 29-03-2018 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SUPERFAMILY SSF49493 257 342 8.89E-22 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Gene3D G3DSA:1.10.287.110 1 112 9.9E-38 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Gene3D G3DSA:2.60.260.20 178 252 9.7E-20 T 29-03-2018 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Gene3D G3DSA:2.60.260.20 113 177 6.0E-15 T 29-03-2018 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Pfam PF00226 DnaJ domain 5 67 7.5E-29 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SUPERFAMILY SSF46565 1 107 1.31E-36 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 PRINTS PR00625 DnaJ domain signature 42 62 8.4E-34 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 PRINTS PR00625 DnaJ domain signature 7 25 8.4E-34 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 PRINTS PR00625 DnaJ domain signature 62 81 8.4E-34 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 PRINTS PR00625 DnaJ domain signature 25 40 8.4E-34 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Pfam PF00684 DnaJ central domain 145 205 5.7E-16 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Pfam PF01556 DnaJ C terminal domain 119 331 5.0E-45 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SUPERFAMILY SSF57938 132 209 3.53E-24 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.934 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CPU03_RS04935 eada202aeec1b9b50bb15c7cd0bc0488 377 SMART SM00271 4 62 7.8E-32 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 SUPERFAMILY SSF55424 336 450 1.37E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.9E-216 T 29-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 Gene3D G3DSA:3.30.390.30 332 450 2.3E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 Gene3D G3DSA:3.50.50.60 1 165 8.4E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 Gene3D G3DSA:3.40.50.720 166 331 4.5E-35 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PIRSF PIRSF000350 1 447 3.5E-84 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 1.2E-67 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.6E-30 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 6.6E-30 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 6.6E-30 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 6.6E-30 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 6.6E-30 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.4E-67 T 29-03-2018 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 9.3E-36 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS08765 d426e475f0d9c6c3d1c18d2e82c7f31f 450 SUPERFAMILY SSF51905 1 363 2.85E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 PIRSF PIRSF000524 1 365 1.7E-61 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 Pfam PF00266 Aminotransferase class-V 40 307 7.4E-27 T 29-03-2018 IPR000192 Aminotransferase class V domain CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 7 362 9.4E-153 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 Gene3D G3DSA:3.40.640.10 17 255 1.3E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 Gene3D G3DSA:3.90.1150.10 256 367 6.7E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 SUPERFAMILY SSF53383 6 363 5.16E-87 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 4 366 8.4E-184 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CPU03_RS15410 477fe43117378431075fba7ff333c37a 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 200.327 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 CPU03_RS14280 9106436bf898739e1a8ace3eff4a5215 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 321 3.9E-116 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CPU03_RS14280 9106436bf898739e1a8ace3eff4a5215 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 323 5.8E-104 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CPU03_RS14280 9106436bf898739e1a8ace3eff4a5215 331 Gene3D G3DSA:3.40.50.300 46 236 4.2E-7 T 29-03-2018 CPU03_RS14280 9106436bf898739e1a8ace3eff4a5215 331 SUPERFAMILY SSF52540 47 161 7.83E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14280 9106436bf898739e1a8ace3eff4a5215 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 41.224 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 Gene3D G3DSA:3.40.190.10 212 307 4.0E-23 T 29-03-2018 CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 PIRSF PIRSF002741 1 545 5.2E-93 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 Gene3D G3DSA:3.90.76.10 48 211 1.8E-32 T 29-03-2018 CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 461 1.4E-83 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 SUPERFAMILY SSF53850 40 540 1.99E-133 T 29-03-2018 CPU03_RS00460 986d3b3102f3ebc514739ef2864cde30 564 Gene3D G3DSA:3.10.105.10 308 513 1.9E-56 T 29-03-2018 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 2.2E-33 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 SUPERFAMILY SSF52540 23 254 3.33E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 SUPERFAMILY SSF46785 260 331 2.31E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 333 1.0E-37 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Gene3D G3DSA:1.10.8.60 187 257 1.1E-31 T 29-03-2018 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 1.5E-117 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 SMART SM00382 54 181 2.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 2.0E-148 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Gene3D G3DSA:1.10.10.10 260 330 3.8E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.314 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CPU03_RS01420 eb6e1934da38ebcf1075bcf3ce84330f 334 Gene3D G3DSA:3.40.50.300 21 184 4.4E-28 T 29-03-2018 CPU03_RS13205 1834eada910f487abf0a1eaf2c2895d0 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 6.3E-23 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS13205 1834eada910f487abf0a1eaf2c2895d0 298 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 4.7E-19 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 CPU03_RS13205 1834eada910f487abf0a1eaf2c2895d0 298 SUPERFAMILY SSF51735 1 297 2.94E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS13205 1834eada910f487abf0a1eaf2c2895d0 298 Gene3D G3DSA:3.40.50.720 2 298 3.0E-43 T 29-03-2018 CPU03_RS13205 1834eada910f487abf0a1eaf2c2895d0 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.2E-109 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 SUPERFAMILY SSF82689 996 1096 2.35E-26 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 Pfam PF00924 Mechanosensitive ion channel 886 1085 3.1E-58 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 Pfam PF12795 Mechanosensitive ion channel porin domain 49 284 3.5E-50 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 Gene3D G3DSA:2.30.30.60 945 995 4.4E-13 T 29-03-2018 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 503 825 2.6E-101 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 SUPERFAMILY SSF50182 929 994 4.58E-17 T 29-03-2018 IPR010920 LSM domain CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 Gene3D G3DSA:3.30.70.100 996 1090 3.9E-20 T 29-03-2018 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 SUPERFAMILY SSF82861 843 926 7.19E-7 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CPU03_RS03235 0f98262a15bd74e4997d8002009d8699 1119 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 958 992 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 SUPERFAMILY SSF53686 100 437 2.74E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 Gene3D G3DSA:3.40.50.1100 115 230 5.1E-26 T 29-03-2018 CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 Gene3D G3DSA:3.40.50.1100 231 441 4.9E-28 T 29-03-2018 CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 396 8.1E-64 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 274.202 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CPU03_RS14970 88f32dcbc2302944af85f5ec287fb079 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 2.1E-232 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CPU03_RS07425 bae45a5c443523cf62efb3afcd558534 246 Gene3D G3DSA:3.40.50.2300 46 121 0.16 T 29-03-2018 CPU03_RS07425 bae45a5c443523cf62efb3afcd558534 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.949 T 29-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS07425 bae45a5c443523cf62efb3afcd558534 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 6.3E-68 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS07425 bae45a5c443523cf62efb3afcd558534 246 Gene3D G3DSA:3.40.50.2300 122 203 0.13 T 29-03-2018 CPU03_RS07425 bae45a5c443523cf62efb3afcd558534 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 1.8E-51 T 29-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 Pfam PF03466 LysR substrate binding domain 93 293 6.5E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 SUPERFAMILY SSF53850 94 291 6.05E-39 T 29-03-2018 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 Gene3D G3DSA:3.40.190.10 184 266 5.5E-21 T 29-03-2018 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 SUPERFAMILY SSF46785 2 84 4.94E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 Gene3D G3DSA:1.10.10.10 1 86 3.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10785 348e3090972eb117905d84a5b00274ca 316 Gene3D G3DSA:3.40.190.10 93 183 5.7E-21 T 29-03-2018 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 Pfam PF00005 ABC transporter 17 178 1.3E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 Pfam PF00005 ABC transporter 329 459 6.7E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 Pfam PF12848 ABC transporter 217 297 3.2E-28 T 29-03-2018 IPR032781 ABC-transporter extension domain CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 Gene3D G3DSA:3.40.50.300 2 279 1.0E-52 T 29-03-2018 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 SUPERFAMILY SSF52540 293 516 3.6E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 SUPERFAMILY SSF52540 119 243 8.5E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 SUPERFAMILY SSF52540 2 92 8.5E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 Gene3D G3DSA:3.40.50.300 309 605 7.3E-51 T 29-03-2018 CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 SMART SM00382 26 223 1.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 SMART SM00382 337 506 1.7E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS09300 bff824997b6cb8fc872df06c37030c0d 641 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 1.2E-82 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Gene3D G3DSA:2.40.30.110 277 362 6.9E-18 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Gene3D G3DSA:4.10.1250.10 232 276 1.1E-15 T 29-03-2018 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 SUPERFAMILY SSF101790 274 360 3.11E-21 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 2.9E-136 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Gene3D G3DSA:3.30.1360.120 2 136 2.5E-33 T 29-03-2018 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 SUPERFAMILY SSF103025 3 277 3.77E-92 T 29-03-2018 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 PIRSF PIRSF006487 1 362 7.2E-80 T 29-03-2018 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Gene3D G3DSA:3.30.1360.120 137 231 2.9E-22 T 29-03-2018 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 42.373 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CPU03_RS10610 b5017f2fc8d8767fb2518c0a09e201cb 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 3.5E-18 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 Pfam PF03466 LysR substrate binding domain 100 296 1.3E-25 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 SUPERFAMILY SSF53850 101 301 2.39E-26 T 29-03-2018 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 Gene3D G3DSA:3.40.190.10 188 269 1.7E-8 T 29-03-2018 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 SUPERFAMILY SSF46785 7 109 6.68E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 Gene3D G3DSA:3.40.190.10 98 187 1.6E-11 T 29-03-2018 CPU03_RS03760 45bb3f0a9adbe08d124cd44800db3a26 313 Gene3D G3DSA:1.10.10.10 8 89 3.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13655 03c805b1b9224009fba997fc368ac012 398 Gene3D G3DSA:1.20.1250.20 203 396 7.2E-14 T 29-03-2018 CPU03_RS13655 03c805b1b9224009fba997fc368ac012 398 Gene3D G3DSA:1.20.1250.20 7 196 9.0E-36 T 29-03-2018 CPU03_RS13655 03c805b1b9224009fba997fc368ac012 398 SUPERFAMILY SSF103473 7 388 1.57E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS13655 03c805b1b9224009fba997fc368ac012 398 Pfam PF07690 Major Facilitator Superfamily 16 358 5.2E-48 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS13655 03c805b1b9224009fba997fc368ac012 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 9.2E-135 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CPU03_RS08500 76f53a5bc68967cb7f8824522134cf66 318 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 314 1.3E-72 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CPU03_RS08500 76f53a5bc68967cb7f8824522134cf66 318 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 318 35.046 T 29-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CPU03_RS08500 76f53a5bc68967cb7f8824522134cf66 318 Gene3D G3DSA:3.30.70.1070 240 315 3.2E-18 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS08500 76f53a5bc68967cb7f8824522134cf66 318 Pfam PF05036 Sporulation related domain 244 312 8.1E-19 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS08500 76f53a5bc68967cb7f8824522134cf66 318 SUPERFAMILY SSF110997 243 314 8.76E-22 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 208 37.33 T 29-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 2.0E-20 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 SUPERFAMILY SSF101386 120 207 1.5E-23 T 29-03-2018 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 120 203 2.1E-30 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 117 203 18.648 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.3E-30 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 Gene3D G3DSA:1.10.287.1080 117 210 6.2E-21 T 29-03-2018 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 SUPERFAMILY SSF141734 14 126 8.24E-44 T 29-03-2018 CPU03_RS13785 70738f3babc18cdfe31565e15f701270 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 207 3.6E-16 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 SUPERFAMILY SSF53244 323 476 1.04E-46 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.65 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.1E-28 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Gene3D G3DSA:3.90.190.20 325 480 1.8E-36 T 29-03-2018 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 SUPERFAMILY SSF51984 20 106 1.02E-28 T 29-03-2018 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 419 3.3E-22 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Gene3D G3DSA:3.40.1190.10 108 324 2.0E-54 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.4E-182 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 SUPERFAMILY SSF53623 105 322 4.71E-73 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Gene3D G3DSA:3.40.50.720 1 107 3.8E-19 T 29-03-2018 CPU03_RS04665 deae1e8a53c148a6f206b58bcb6679d7 487 Pfam PF08245 Mur ligase middle domain 124 304 1.6E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 Gene3D G3DSA:3.30.360.10 188 490 4.2E-125 T 29-03-2018 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 6.4E-60 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 487 2.1E-115 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 SUPERFAMILY SSF51735 5 189 7.68E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 1.4E-198 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 SUPERFAMILY SSF55347 176 487 4.58E-114 T 29-03-2018 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 Gene3D G3DSA:3.40.50.720 7 187 6.6E-64 T 29-03-2018 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 6.0E-48 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 6.0E-48 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 6.0E-48 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 6.0E-48 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 6.0E-48 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.546 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS01375 21b5ecf0dfd65728d6bd5e0eba52f117 490 PIRSF PIRSF000110 1 490 1.5E-182 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CPU03_RS07945 dd6e5574e8b204a9b04d669c77c0d980 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 140 4.3E-48 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CPU03_RS07945 dd6e5574e8b204a9b04d669c77c0d980 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 165 1.6E-44 T 29-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CPU03_RS07945 dd6e5574e8b204a9b04d669c77c0d980 175 Gene3D G3DSA:3.40.50.300 1 171 4.5E-28 T 29-03-2018 CPU03_RS07945 dd6e5574e8b204a9b04d669c77c0d980 175 SUPERFAMILY SSF52540 4 166 7.61E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 512 2.2E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 6.9E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 6.9E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 640 6.9E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 SMART SM00388 447 515 1.1E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 PIRSF PIRSF037119 403 663 1.9E-101 T 29-03-2018 IPR017116 Signal transduction histidine kinase, PgtB CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 PIRSF PIRSF037119 4 410 3.0E-107 T 29-03-2018 IPR017116 Signal transduction histidine kinase, PgtB CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 658 8.7E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 Gene3D G3DSA:1.10.287.130 405 511 1.0E-5 T 29-03-2018 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 Gene3D G3DSA:3.30.565.10 516 670 6.8E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 SUPERFAMILY SSF55874 514 659 7.6E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 SMART SM00304 364 416 2.9E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 SUPERFAMILY SSF47384 443 512 3.92E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS01860 541d1799744f8a92c2d37a3d356b9856 675 SMART SM00387 556 662 6.8E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08890 21724a88704d922f08602b6d96a17403 216 SUPERFAMILY SSF81342 4 209 9.81E-55 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS08890 21724a88704d922f08602b6d96a17403 216 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 2.4E-65 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CPU03_RS08890 21724a88704d922f08602b6d96a17403 216 Pfam PF01292 Prokaryotic cytochrome b561 13 186 2.7E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS08890 21724a88704d922f08602b6d96a17403 216 Gene3D G3DSA:1.20.950.20 1 215 1.4E-53 T 29-03-2018 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.509 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 9.0E-30 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 Gene3D G3DSA:3.90.940.10 1 91 1.4E-28 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 SUPERFAMILY SSF63562 1 79 4.71E-25 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 SMART SM01409 8 61 1.1E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CPU03_RS08340 e1ce1418fcdaf06452a7183014ba7e6d 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.1E-15 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 SUPERFAMILY SSF102114 5 283 1.7E-72 T 29-03-2018 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 5.1E-6 T 29-03-2018 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 Pfam PF04055 Radical SAM superfamily 19 181 4.5E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 Gene3D G3DSA:3.20.20.70 1 329 2.1E-73 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.737 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 4.0E-106 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 SMART SM00729 14 219 1.2E-8 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS13475 0c9b36d8b88322cebdbce3c61d3b9544 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 8.3E-37 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CPU03_RS15460 fa645381f026fef6675646121fc5107a 118 Pfam PF04138 GtrA-like protein 4 113 6.4E-12 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CPU03_RS15460 fa645381f026fef6675646121fc5107a 118 PIRSF PIRSF006298 1 115 3.4E-43 T 29-03-2018 IPR016480 Glucose translocase, bactoprenol-linked CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 29-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 80 3.8E-29 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 SUPERFAMILY SSF159127 1 85 4.05E-26 T 29-03-2018 CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.3E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.3E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.3E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.3E-24 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS10815 bc3597636c0c9ddda6d80e07281c197f 97 Pfam PF01455 HupF/HypC family 1 72 2.9E-27 T 29-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CPU03_RS13835 1f712bef0e70ce2d193547a8d6cedf6c 277 Pfam PF12833 Helix-turn-helix domain 185 262 2.1E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS13835 1f712bef0e70ce2d193547a8d6cedf6c 277 Gene3D G3DSA:1.10.10.60 217 274 6.4E-12 T 29-03-2018 CPU03_RS13835 1f712bef0e70ce2d193547a8d6cedf6c 277 SUPERFAMILY SSF46689 214 265 3.67E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS13835 1f712bef0e70ce2d193547a8d6cedf6c 277 Gene3D G3DSA:1.10.10.60 158 216 8.1E-5 T 29-03-2018 CPU03_RS13835 1f712bef0e70ce2d193547a8d6cedf6c 277 SMART SM00342 179 261 1.7E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS05520 c540b33c4de5e828798d20fcfb53a013 438 Gene3D G3DSA:2.40.320.10 4 209 8.9E-43 T 29-03-2018 CPU03_RS05520 c540b33c4de5e828798d20fcfb53a013 438 SUPERFAMILY SSF55154 5 214 1.19E-49 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CPU03_RS05520 c540b33c4de5e828798d20fcfb53a013 438 SMART SM01118 6 206 9.0E-37 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CPU03_RS05520 c540b33c4de5e828798d20fcfb53a013 438 Pfam PF01928 CYTH domain 8 200 2.4E-30 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 SUPERFAMILY SSF46785 20 100 6.75E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 87 3.1E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 Gene3D G3DSA:1.10.10.10 9 89 7.6E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 Pfam PF07702 UTRA domain 113 246 2.6E-32 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 SMART SM00866 111 247 8.0E-31 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.9E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.9E-6 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 SMART SM00345 28 87 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 SUPERFAMILY SSF64288 77 250 5.85E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS14770 3d7e9058558ccafcf1f9feb01d98dc92 252 Gene3D G3DSA:3.40.1410.10 94 251 2.8E-38 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 Gene3D G3DSA:3.40.50.1360 75 242 7.3E-42 T 29-03-2018 CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 Pfam PF08220 DeoR-like helix-turn-helix domain 8 63 1.7E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 SUPERFAMILY SSF46785 7 70 1.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 Pfam PF00455 DeoR C terminal sensor domain 77 235 2.9E-51 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 Gene3D G3DSA:1.10.10.10 3 66 3.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 SMART SM01134 75 236 4.6E-72 T 29-03-2018 CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 SUPERFAMILY SSF100950 76 237 5.56E-34 T 29-03-2018 CPU03_RS04485 152fd55343512a9bb32178d3474904fe 257 SMART SM00420 8 60 2.2E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SMART SM00388 135 200 1.3E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Gene3D G3DSA:3.30.565.10 198 355 2.6E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SMART SM00091 13 81 3.2E-4 T 29-03-2018 IPR000014 PAS domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SUPERFAMILY SSF55785 18 106 1.68E-7 T 29-03-2018 IPR000014 PAS domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 353 1.9E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Pfam PF08448 PAS fold 19 107 8.5E-7 T 29-03-2018 IPR013656 PAS fold-4 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 197 5.8E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.9E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SUPERFAMILY SSF55874 204 352 1.1E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Gene3D G3DSA:3.30.450.20 7 129 8.6E-12 T 29-03-2018 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SMART SM00387 239 355 2.1E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 SUPERFAMILY SSF47384 127 196 4.9E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS07880 8f1cf2b1466be5208577a84cf080b6d3 355 Gene3D G3DSA:1.10.287.130 130 196 2.0E-14 T 29-03-2018 CPU03_RS13630 ac44466378c47eb2ce6d222a0cd11afd 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 2.7E-97 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CPU03_RS13630 ac44466378c47eb2ce6d222a0cd11afd 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 44.995 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:4.10.320.10 317 378 8.8E-20 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 SUPERFAMILY SSF51230 202 292 3.66E-21 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:3.90.1170.30 44 143 1.6E-23 T 29-03-2018 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:3.90.1170.30 2 43 2.6E-9 T 29-03-2018 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:3.90.1170.30 144 242 4.6E-21 T 29-03-2018 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:3.30.559.10 385 627 2.8E-81 T 29-03-2018 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Pfam PF02817 e3 binding domain 323 358 5.9E-15 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 SUPERFAMILY SSF51230 102 194 9.82E-23 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Pfam PF00364 Biotin-requiring enzyme 5 73 5.3E-21 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Pfam PF00364 Biotin-requiring enzyme 203 271 2.3E-20 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Pfam PF00364 Biotin-requiring enzyme 104 173 9.4E-22 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 SUPERFAMILY SSF51230 1 92 3.01E-22 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Gene3D G3DSA:2.40.50.100 243 316 2.6E-10 T 29-03-2018 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 SUPERFAMILY SSF47005 318 362 7.98E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 190 627 3.9E-215 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 223 252 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 626 1.8E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS04555 7f218978902d3c81f6df2a5f2b267dbb 627 SUPERFAMILY SSF52777 385 626 1.51E-80 T 29-03-2018 CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Gene3D G3DSA:3.40.50.300 10 221 3.2E-59 T 29-03-2018 CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 SUPERFAMILY SSF52540 74 361 1.34E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Gene3D G3DSA:3.40.50.300 222 408 3.3E-42 T 29-03-2018 CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Pfam PF03880 DbpA RNA binding domain 492 561 4.2E-19 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 SMART SM00487 25 223 4.6E-64 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Pfam PF00270 DEAD/DEAH box helicase 31 195 8.9E-51 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Pfam PF00271 Helicase conserved C-terminal domain 232 340 7.5E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 SMART SM00490 259 340 4.3E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS05985 dcf691e223ce815d79e459263eda6410 638 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 563 46.997 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CPU03_RS02730 8e3227d794018af01792105dbb7850df 193 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 2 189 7.0E-39 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 CPU03_RS02730 8e3227d794018af01792105dbb7850df 193 Gene3D G3DSA:2.60.460.10 30 189 2.0E-51 T 29-03-2018 CPU03_RS02730 8e3227d794018af01792105dbb7850df 193 Pfam PF06572 Protein of unknown function (DUF1131) 23 189 2.7E-65 T 29-03-2018 IPR010938 Protein of unknown function DUF1131 CPU03_RS16265 121242901f0689744b720399e9628db9 221 SUPERFAMILY SSF53098 8 207 4.51E-56 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS16265 121242901f0689744b720399e9628db9 221 SMART SM00479 18 203 3.7E-33 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS16265 121242901f0689744b720399e9628db9 221 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 2.1E-100 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CPU03_RS16265 121242901f0689744b720399e9628db9 221 Hamap MF_00157 Ribonuclease T [rnt]. 1 221 111.742 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CPU03_RS16265 121242901f0689744b720399e9628db9 221 Gene3D G3DSA:3.30.420.10 9 211 1.1E-30 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS16265 121242901f0689744b720399e9628db9 221 Pfam PF00929 Exonuclease 20 194 4.8E-35 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 SUPERFAMILY SSF51735 2 166 9.28E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 168 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 Pfam PF02056 Family 4 glycosyl hydrolase 3 179 2.1E-52 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.2E-28 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 1.2E-28 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 1.2E-28 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.2E-28 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 93 106 1.2E-28 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 213 425 1.9E-51 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 Gene3D G3DSA:3.90.1820.10 326 456 1.6E-31 T 29-03-2018 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 Gene3D G3DSA:3.90.1820.10 1 321 2.9E-65 T 29-03-2018 CPU03_RS10290 d62003765812b2a7af230bd85f9cd3bf 459 SUPERFAMILY SSF56327 203 453 1.12E-53 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:1.10.150.20 352 421 4.6E-16 T 29-03-2018 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 3.4E-18 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.1E-20 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF50249 132 199 8.99E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:3.30.300.20 199 276 1.5E-32 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SMART SM00322 301 358 0.093 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SMART SM00322 230 293 17.0 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:3.30.1480.10 1 128 1.2E-45 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:1.10.150.20 431 490 5.8E-15 T 29-03-2018 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF47794 429 492 3.92E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.0E-130 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SMART SM00316 133 200 1.3E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF54814 201 278 3.07E-29 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Pfam PF08529 NusA N-terminal domain 4 123 5.3E-37 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF54814 279 342 3.66E-15 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Pfam PF13184 NusA-like KH domain 230 297 8.1E-28 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.4E-9 T 29-03-2018 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 SUPERFAMILY SSF47794 355 415 3.61E-16 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:2.40.50.140 129 198 6.1E-13 T 29-03-2018 CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Gene3D G3DSA:3.30.300.20 278 347 1.0E-12 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS06020 2a572f670915a355b0faf0303a190f1d 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.973 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Gene3D G3DSA:2.70.20.10 364 478 1.2E-20 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Gene3D G3DSA:3.40.50.140 1 156 5.2E-39 T 29-03-2018 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Gene3D G3DSA:1.10.460.10 157 363 2.6E-38 T 29-03-2018 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Gene3D G3DSA:1.10.460.10 479 642 1.8E-21 T 29-03-2018 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 SMART SM00437 280 558 9.9E-99 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 SUPERFAMILY SSF56712 1 606 5.62E-182 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Pfam PF01131 DNA topoisomerase 156 592 3.1E-107 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 SMART SM00493 1 124 7.3E-26 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 640 63.818 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 Pfam PF01751 Toprim domain 3 135 3.2E-15 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 SMART SM00436 128 223 4.0E-36 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.4E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS01120 b6748538ce417116dae6be8f6487d59a 642 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 633 4.7E-269 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CPU03_RS05785 e128485f8a1711fab63b70ee3b657ffb 353 SUPERFAMILY SSF56349 67 333 5.18E-44 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS05785 e128485f8a1711fab63b70ee3b657ffb 353 Gene3D G3DSA:1.10.443.10 179 336 2.3E-36 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS05785 e128485f8a1711fab63b70ee3b657ffb 353 Gene3D G3DSA:1.10.150.130 35 178 6.3E-8 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS05785 e128485f8a1711fab63b70ee3b657ffb 353 Pfam PF00589 Phage integrase family 177 250 2.0E-7 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS05785 e128485f8a1711fab63b70ee3b657ffb 353 Pfam PF00589 Phage integrase family 266 325 1.7E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 SUPERFAMILY SSF48498 83 193 1.14E-7 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 Gene3D G3DSA:1.10.357.10 59 196 6.6E-17 T 29-03-2018 CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 41.169 T 29-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 SUPERFAMILY SSF46689 10 73 1.13E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 2.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS07680 5f852bc4c147d00ba6aabe8928b2f141 198 Gene3D G3DSA:1.10.10.60 3 58 1.1E-12 T 29-03-2018 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 Gene3D G3DSA:3.30.930.10 9 324 5.3E-65 T 29-03-2018 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 1.4E-45 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.5E-131 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 SUPERFAMILY SSF55681 13 320 1.97E-81 T 29-03-2018 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.422 T 29-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 1.6E-5 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS06365 556ac65d3ba8a7724b73ebf64c7f143e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 1.6E-5 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS03845 5856e6139882e67b432dfa30b44bc913 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 6.0E-39 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CPU03_RS03845 5856e6139882e67b432dfa30b44bc913 106 Pfam PF17345 Family of unknown function (DUF5375) 2 106 2.0E-59 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CPU03_RS00195 e8d794a3a92727708ae8d8f74703a579 69 Gene3D G3DSA:3.30.1580.10 4 66 3.9E-24 T 29-03-2018 CPU03_RS00195 e8d794a3a92727708ae8d8f74703a579 69 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 24 66 2.0E-5 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CPU03_RS00195 e8d794a3a92727708ae8d8f74703a579 69 Pfam PF02831 gpW 5 67 2.1E-22 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CPU03_RS00195 e8d794a3a92727708ae8d8f74703a579 69 SUPERFAMILY SSF64210 5 57 5.36E-14 T 29-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 2.4E-28 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 Gene3D G3DSA:1.10.10.10 124 228 4.5E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 Pfam PF00072 Response regulator receiver domain 5 117 4.4E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 SMART SM00862 150 225 2.6E-27 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.5E-113 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 Gene3D G3DSA:3.40.50.2300 1 123 3.2E-35 T 29-03-2018 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 SUPERFAMILY SSF52172 3 125 1.57E-42 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 SUPERFAMILY SSF46894 130 226 4.25E-32 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS02965 adc20684a37e8654076b369eadfd3d01 229 SMART SM00448 3 116 5.3E-43 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 PIRSF PIRSF001220 1 334 1.3E-95 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 Gene3D G3DSA:3.40.50.40 210 337 1.2E-42 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 Pfam PF00710 Asparaginase, N-terminal 6 186 1.6E-63 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 SUPERFAMILY SSF53774 3 335 3.93E-112 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 Gene3D G3DSA:3.40.50.1170 1 208 7.3E-81 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 SMART SM00870 5 323 9.1E-142 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.1E-123 T 29-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 PIRSF PIRSF500176 2 332 7.9E-114 T 29-03-2018 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 2.1E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 2.1E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS01145 500243714b900e4bdd6a135e8cda21e9 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 2.1E-16 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Gene3D G3DSA:3.30.70.1450 224 305 1.9E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Pfam PF02080 TrkA-C domain 231 297 2.7E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Pfam PF02080 TrkA-C domain 326 396 1.0E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 SUPERFAMILY SSF116726 321 396 1.02E-18 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Gene3D G3DSA:3.30.70.1450 315 403 3.6E-19 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Pfam PF03600 Citrate transporter 433 605 2.8E-18 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 Pfam PF03600 Citrate transporter 16 197 6.7E-32 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 SUPERFAMILY SSF116726 232 289 5.36E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS13265 119b36d0e3d069712172638ba1017820 613 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 561 577 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 Pfam PF00293 NUDIX domain 13 143 5.4E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 SUPERFAMILY SSF55811 8 141 3.66E-23 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 Gene3D G3DSA:3.90.79.10 4 169 5.6E-24 T 29-03-2018 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 PRINTS PR00502 NUDIX hydrolase family signature 59 74 6.2E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS00620 7105774d9f08d1f798000a0e2b4c8077 172 PRINTS PR00502 NUDIX hydrolase family signature 45 59 6.2E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS07465 386251d8e99a8b17c7aee4c05a3505d5 354 Gene3D G3DSA:3.90.25.10 232 337 1.3E-27 T 29-03-2018 CPU03_RS07465 386251d8e99a8b17c7aee4c05a3505d5 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 2.5E-97 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07465 386251d8e99a8b17c7aee4c05a3505d5 354 Gene3D G3DSA:3.40.50.720 1 231 6.5E-61 T 29-03-2018 CPU03_RS07465 386251d8e99a8b17c7aee4c05a3505d5 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 1.5E-155 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CPU03_RS07465 386251d8e99a8b17c7aee4c05a3505d5 354 SUPERFAMILY SSF51735 3 345 2.56E-92 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 SUPERFAMILY SSF51735 1 336 4.42E-100 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 Gene3D G3DSA:3.90.25.10 254 337 2.5E-21 T 29-03-2018 CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 Gene3D G3DSA:3.90.25.10 208 253 3.3E-11 T 29-03-2018 CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 Gene3D G3DSA:3.40.50.720 1 207 7.3E-43 T 29-03-2018 CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 1.3E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS12665 75a55521fa90a2c946d346ed4c2c9c6d 347 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 5.4E-144 T 29-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Gene3D G3DSA:3.40.50.2300 58 174 2.3E-23 T 29-03-2018 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Gene3D G3DSA:3.40.50.2300 175 313 4.0E-18 T 29-03-2018 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Gene3D G3DSA:1.10.10.60 2 17 0.018 T 29-03-2018 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Gene3D G3DSA:1.10.260.40 18 57 4.3E-20 T 29-03-2018 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 SUPERFAMILY SSF47413 1 60 3.3E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 2.4E-15 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 SMART SM00354 1 72 7.5E-29 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 SUPERFAMILY SSF53822 59 316 1.91E-46 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS13895 d46aa6322a2563bd8469e6ffe26fc646 336 Pfam PF13377 Periplasmic binding protein-like domain 170 333 4.7E-19 T 29-03-2018 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 Gene3D G3DSA:3.90.1150.10 248 386 2.3E-52 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 381 2.0E-138 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 SUPERFAMILY SSF53383 9 381 9.52E-119 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS08535 b274234d32ebfad528488c3016671974 386 PIRSF PIRSF001434 2 384 4.0E-136 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 3.1E-199 T 29-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CPU03_RS08535 b274234d32ebfad528488c3016671974 386 Gene3D G3DSA:3.40.640.10 1 247 1.5E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 Gene3D G3DSA:3.30.1130.10 87 219 8.2E-47 T 29-03-2018 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.19 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 Pfam PF01227 GTP cyclohydrolase I 38 216 1.8E-63 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 7.8E-84 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 SUPERFAMILY SSF55620 6 219 3.71E-74 T 29-03-2018 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 Gene3D G3DSA:1.10.286.10 7 83 2.2E-21 T 29-03-2018 CPU03_RS02560 737f31d33832f3262cd5888933fbef20 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 TIGRFAM TIGR01178 ade: adenine deaminase 31 583 1.5E-206 T 29-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Pfam PF01979 Amidohydrolase family 82 363 2.5E-23 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Gene3D G3DSA:2.30.40.10 275 369 1.1E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 SUPERFAMILY SSF51556 85 333 2.49E-24 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Pfam PF13382 Adenine deaminase C-terminal domain 434 579 2.9E-56 T 29-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Hamap MF_01518 Adenine deaminase [ade]. 31 583 35.143 T 29-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Gene3D G3DSA:3.20.20.140 90 273 3.9E-8 T 29-03-2018 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 Gene3D G3DSA:2.30.40.10 27 89 3.2E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 SUPERFAMILY SSF51338 22 85 3.67E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08155 b37a5666c143986618deaddb56d1bd0d 591 SUPERFAMILY SSF51338 333 348 3.67E-15 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS05765 b9a1ef2373d84026a3fc0ba217e69727 168 Pfam PF06892 Phage regulatory protein CII (CP76) 4 159 5.5E-60 T 29-03-2018 IPR009679 Bacteriophage 186, CII CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 260 63.657 T 29-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 Pfam PF01026 TatD related DNase 3 257 2.2E-66 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 Gene3D G3DSA:3.20.20.140 1 260 1.9E-82 T 29-03-2018 CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 SUPERFAMILY SSF51556 1 259 1.54E-82 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CPU03_RS07210 1ac86d79a2e60505a7cf36cb1a663f37 260 PIRSF PIRSF005902 1 260 4.2E-76 T 29-03-2018 IPR001130 TatD family GO:0016788 CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 SUPERFAMILY SSF54637 116 283 2.19E-59 T 29-03-2018 IPR029069 HotDog domain CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.0E-97 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 SUPERFAMILY SSF54637 5 114 1.62E-39 T 29-03-2018 IPR029069 HotDog domain CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 Pfam PF13622 Thioesterase-like superfamily 33 282 3.1E-60 T 29-03-2018 CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 Gene3D G3DSA:3.10.129.10 131 286 8.9E-56 T 29-03-2018 CPU03_RS03285 fc9b6f40bf3283660feb9e4d8cbf6655 288 Gene3D G3DSA:3.10.129.10 2 116 1.9E-42 T 29-03-2018 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 Gene3D G3DSA:2.40.50.100 1 64 1.1E-19 T 29-03-2018 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 Gene3D G3DSA:2.40.50.100 65 132 4.1E-21 T 29-03-2018 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 Pfam PF03459 TOBE domain 4 64 1.5E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 Pfam PF03459 TOBE domain 76 137 5.4E-15 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 73 140 9.4E-19 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 3.0E-23 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 SUPERFAMILY SSF50331 1 69 8.5E-20 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS03560 9d0e3620b55c2a1cabc7e46f26cb9823 142 SUPERFAMILY SSF50331 73 140 2.14E-19 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS11280 4a405363481e05374eee289f9361978c 245 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.1E-33 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS11280 4a405363481e05374eee289f9361978c 245 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 5.8E-88 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS11280 4a405363481e05374eee289f9361978c 245 SUPERFAMILY SSF75217 4 175 1.77E-38 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS11280 4a405363481e05374eee289f9361978c 245 PIRSF PIRSF004808 1 244 1.3E-76 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS11280 4a405363481e05374eee289f9361978c 245 Gene3D G3DSA:3.40.1280.10 1 165 5.3E-43 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS16035 7d40088177884496d9dbea072552d845 205 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 85 205 9.2E-13 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 PIRSF PIRSF006621 15 339 2.2E-71 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 Gene3D G3DSA:3.20.20.70 23 264 2.1E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 107 125 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 26 341 1.9E-161 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 21 342 52.922 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 Pfam PF01207 Dihydrouridine synthase (Dus) 29 338 4.7E-91 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS06785 690ba1219cf1582b81c36a88003d850c 345 SUPERFAMILY SSF51395 26 335 7.73E-73 T 29-03-2018 CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 SUPERFAMILY SSF51735 9 237 4.28E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 236 2.7E-26 T 29-03-2018 CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 Gene3D G3DSA:3.40.50.720 8 240 2.4E-42 T 29-03-2018 CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 1.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16560 9e1cbb5770ab6067cec9811fe6d198ef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.1E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS02405 4d47ac3612273242e00ce7a6f0d9e75b 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 1.4E-75 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CPU03_RS02405 4d47ac3612273242e00ce7a6f0d9e75b 182 Gene3D G3DSA:2.60.120.10 1 180 8.4E-79 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS02405 4d47ac3612273242e00ce7a6f0d9e75b 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 2.0E-69 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CPU03_RS02405 4d47ac3612273242e00ce7a6f0d9e75b 182 SUPERFAMILY SSF51182 1 179 3.03E-81 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS02405 4d47ac3612273242e00ce7a6f0d9e75b 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 1.1E-83 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CPU03_RS03370 743a597fca76e5d50198f249cb540e5f 465 Gene3D G3DSA:1.20.1250.20 200 398 4.6E-19 T 29-03-2018 CPU03_RS03370 743a597fca76e5d50198f249cb540e5f 465 SUPERFAMILY SSF103473 6 392 3.4E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS03370 743a597fca76e5d50198f249cb540e5f 465 Pfam PF07690 Major Facilitator Superfamily 20 354 2.5E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS03370 743a597fca76e5d50198f249cb540e5f 465 Gene3D G3DSA:1.20.1250.20 8 199 6.1E-31 T 29-03-2018 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 Gene3D G3DSA:1.20.58.340 142 264 1.2E-21 T 29-03-2018 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 SUPERFAMILY SSF144083 266 327 4.84E-13 T 29-03-2018 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 SUPERFAMILY SSF143865 18 262 1.44E-42 T 29-03-2018 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 Gene3D G3DSA:1.20.58.340 265 330 9.1E-16 T 29-03-2018 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 Pfam PF01544 CorA-like Mg2+ transporter protein 44 326 3.1E-56 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CPU03_RS16670 7134d28b1be5bf6a0c4185a85e5cd075 330 Gene3D G3DSA:3.30.460.20 3 141 1.0E-7 T 29-03-2018 CPU03_RS14680 66b321430ee48ca390a268e0ac2c1ed4 221 SUPERFAMILY SSF46894 148 215 1.56E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS14680 66b321430ee48ca390a268e0ac2c1ed4 221 SMART SM00421 157 214 2.8E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS14680 66b321430ee48ca390a268e0ac2c1ed4 221 Gene3D G3DSA:1.10.10.10 59 220 9.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14680 66b321430ee48ca390a268e0ac2c1ed4 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 211 2.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS02125 48cdc0246e8600587bcd8e0750b2a99e 109 Gene3D G3DSA:1.10.890.10 33 101 6.2E-4 T 29-03-2018 CPU03_RS02125 48cdc0246e8600587bcd8e0750b2a99e 109 Pfam PF16456 YmgD protein 26 107 5.6E-46 T 29-03-2018 IPR032497 Uncharacterised protein YmgD CPU03_RS06235 951b02cbff9188818d916a4010a3cff1 249 SUPERFAMILY SSF53474 12 247 7.21E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06235 951b02cbff9188818d916a4010a3cff1 249 Gene3D G3DSA:3.40.50.1820 1 249 2.4E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06235 951b02cbff9188818d916a4010a3cff1 249 Pfam PF00326 Prolyl oligopeptidase family 85 235 1.5E-11 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SMART SM00436 133 221 1.0E-48 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:2.70.20.10 346 464 6.2E-37 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SUPERFAMILY SSF57783 809 864 1.87E-22 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:3.40.50.140 1 163 7.0E-51 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF01131 DNA topoisomerase 157 565 1.3E-127 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:2.20.25.10 809 863 2.4E-30 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SMART SM00437 272 527 3.7E-122 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SUPERFAMILY SSF56712 3 608 1.02E-201 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SUPERFAMILY SSF57783 744 807 6.63E-19 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 4.3E-23 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.9E-12 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:3.30.65.10 745 807 6.6E-9 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:3.30.65.10 582 645 1.5E-10 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:3.30.65.10 700 744 9.7E-9 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:3.30.65.10 646 699 0.12 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SUPERFAMILY SSF57783 586 622 4.42E-7 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 622 4.2E-4 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 708 745 1.2E-11 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SUPERFAMILY SSF57783 702 742 1.7E-6 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 634 2.1E-253 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 SMART SM00493 3 132 7.9E-33 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.004 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Pfam PF01751 Toprim domain 5 142 2.1E-33 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:1.10.460.10 164 342 1.0E-45 T 29-03-2018 CPU03_RS00830 0ae129d9302597c67c701a4e6bac37a0 866 Gene3D G3DSA:1.10.460.10 465 581 9.7E-24 T 29-03-2018 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 Gene3D G3DSA:1.10.10.60 63 113 8.4E-17 T 29-03-2018 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 SUPERFAMILY SSF46689 62 108 1.93E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 Gene3D G3DSA:1.10.10.60 1 62 2.2E-12 T 29-03-2018 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 1.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 1.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 104 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 SMART SM00342 25 108 8.0E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 SUPERFAMILY SSF46689 11 59 3.4E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS00880 1778ed28b655edf52087391e49978cb2 131 Pfam PF12833 Helix-turn-helix domain 31 108 3.0E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:3.30.1490.70 241 322 3.4E-24 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 PIRSF PIRSF001604 1 675 3.8E-253 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:3.30.470.30 120 240 1.6E-53 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SUPERFAMILY SSF47781 405 582 1.74E-60 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 600 673 3.9E-12 T 29-03-2018 IPR001357 BRCT domain CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF14520 Helix-hairpin-helix domain 447 502 4.3E-6 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:1.10.150.20 508 571 2.0E-24 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:1.10.150.20 433 506 3.4E-26 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF12826 Helix-hairpin-helix motif 511 574 2.6E-21 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00278 545 564 81.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00278 447 466 3.2 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00278 513 532 200.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00278 481 500 0.7 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SUPERFAMILY SSF52113 600 673 5.23E-19 T 29-03-2018 IPR001357 BRCT domain CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:3.40.50.10190 572 675 4.1E-23 T 29-03-2018 IPR001357 BRCT domain CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00292 599 674 2.8E-11 T 29-03-2018 IPR001357 BRCT domain CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 669 1.2E-265 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:1.10.287.610 1 68 1.5E-25 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SUPERFAMILY SSF50249 319 400 7.02E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SMART SM00532 4 449 4.9E-282 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 2.3E-135 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 3.2E-37 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 2.6E-11 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 SUPERFAMILY SSF56091 4 317 7.74E-121 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Gene3D G3DSA:2.40.50.140 323 391 8.2E-36 T 29-03-2018 CPU03_RS02690 723b542c572da379a4ea38a62831ba98 675 Hamap MF_01588 DNA ligase [ligA]. 3 673 53.648 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CPU03_RS04575 6c43d139edde1d7962dc738888bdfafa 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 283 5.8E-135 T 29-03-2018 IPR031347 Protein AmpE CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 5.1E-64 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 Pfam PF01578 Cytochrome C assembly protein 32 184 4.7E-32 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CPU03_RS13015 96667d24b03c3c5a5cb69459755ddd0b 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 3.2E-84 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13390 39e56f9baa96ba5b07750d9a82aefd69 396 Gene3D G3DSA:1.20.1630.10 42 338 7.6E-44 T 29-03-2018 CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.625 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 SUPERFAMILY SSF158651 1 75 1.44E-30 T 29-03-2018 IPR023202 YejL-like domain CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 9.0E-28 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 PIRSF PIRSF006188 1 72 2.6E-32 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 Gene3D G3DSA:1.10.3390.10 2 71 3.7E-34 T 29-03-2018 IPR023202 YejL-like domain CPU03_RS13625 ec2431618e272e3ee582d2d3b1b49e41 75 Pfam PF07208 Protein of unknown function (DUF1414) 27 69 1.1E-22 T 29-03-2018 IPR009857 Uncharacterised protein family UPF0352 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SUPERFAMILY SSF47384 379 452 3.34E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SMART SM00387 495 602 4.3E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SUPERFAMILY SSF55785 253 367 1.08E-16 T 29-03-2018 IPR000014 PAS domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Gene3D G3DSA:3.30.450.20 244 380 5.5E-25 T 29-03-2018 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 450 1.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Gene3D G3DSA:1.10.287.130 381 449 2.2E-16 T 29-03-2018 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Pfam PF00989 PAS fold 265 369 7.7E-19 T 29-03-2018 IPR013767 PAS fold GO:0006355 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SUPERFAMILY SSF55874 443 604 2.88E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 7.7E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SMART SM00091 262 329 4.6E-9 T 29-03-2018 IPR000014 PAS domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 380 2.8E-16 T 29-03-2018 IPR000014 PAS domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 601 5.6E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 SMART SM00388 388 453 1.6E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS14935 2bcc8c1ed67719313a24fbb34cf72d39 608 Gene3D G3DSA:3.30.565.10 453 608 1.8E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 Pfam PF01597 Glycine cleavage H-protein 8 127 9.1E-44 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 38.658 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 Gene3D G3DSA:2.40.50.100 6 128 5.5E-44 T 29-03-2018 CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 SUPERFAMILY SSF51230 4 127 4.32E-42 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS10615 7b7aa24b21b0551db99c1470469d5cda 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 4.0E-49 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 7.5E-6 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 SMART SM00926 40 94 3.8E-15 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Hamap MF_01630 Nitrate reductase [napA]. 1 829 29.973 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Gene3D G3DSA:3.40.50.740 100 275 1.1E-37 T 29-03-2018 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 93 7.4E-17 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 3.3E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 SUPERFAMILY SSF50692 689 829 8.59E-43 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Gene3D G3DSA:2.40.40.20 669 829 1.0E-38 T 29-03-2018 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 SUPERFAMILY SSF53706 40 700 4.06E-204 T 29-03-2018 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Pfam PF00384 Molybdopterin oxidoreductase 97 569 8.2E-90 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 4.0E-26 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Gene3D G3DSA:3.40.50.740 305 668 1.4E-67 T 29-03-2018 CPU03_RS02815 fd812b3d61906d67c6a10b63f90a6781 829 Gene3D G3DSA:2.20.25.90 35 99 1.2E-14 T 29-03-2018 CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 SUPERFAMILY SSF52540 4 188 9.13E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 199 7.8E-82 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 Pfam PF00005 ABC transporter 18 157 2.0E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 SMART SM00382 26 204 3.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13005 a3ad7804c1855636ff6e0fb45568edcc 207 Gene3D G3DSA:3.40.50.300 1 200 5.8E-45 T 29-03-2018 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 SMART SM00883 11 104 4.9E-49 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 Pfam PF00166 Chaperonin 10 Kd subunit 11 104 2.9E-30 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 SUPERFAMILY SSF50129 10 105 2.92E-31 T 29-03-2018 IPR011032 GroES-like CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 ProSitePatterns PS00681 Chaperonins cpn10 signature. 12 36 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 Hamap MF_00580 10 kDa chaperonin [groS]. 11 105 24.02 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 Gene3D G3DSA:2.30.33.40 10 105 1.8E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 PRINTS PR00297 10kDa chaperonin signature 91 104 1.5E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 PRINTS PR00297 10kDa chaperonin signature 12 27 1.5E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 PRINTS PR00297 10kDa chaperonin signature 34 55 1.5E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS06435 abbcc51911f682d002e2bb2323e4b041 106 PRINTS PR00297 10kDa chaperonin signature 69 81 1.5E-27 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Gene3D G3DSA:3.40.50.80 253 397 3.2E-21 T 29-03-2018 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 8.0E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Hamap MF_01252 Flavohemoprotein [hmp]. 1 397 52.029 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 367 7.3E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 7.3E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 7.3E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 7.3E-7 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 SUPERFAMILY SSF63380 149 252 1.07E-27 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 SUPERFAMILY SSF52343 255 395 5.37E-31 T 29-03-2018 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 SUPERFAMILY SSF46458 1 143 1.58E-36 T 29-03-2018 IPR009050 Globin-like CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Pfam PF00042 Globin 7 103 6.7E-12 T 29-03-2018 IPR000971 Globin GO:0020037 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Gene3D G3DSA:2.40.30.10 159 252 5.4E-25 T 29-03-2018 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Pfam PF00175 Oxidoreductase NAD-binding domain 264 373 1.4E-10 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CPU03_RS11260 be57d7b39e5b20b695d37769685c1ce8 397 Gene3D G3DSA:1.10.490.10 1 158 6.1E-38 T 29-03-2018 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 29-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 3.9E-72 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 SUPERFAMILY SSF51735 4 170 2.96E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 3.0E-39 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 Gene3D G3DSA:3.90.1820.10 1 316 4.8E-67 T 29-03-2018 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 Gene3D G3DSA:3.90.1820.10 317 450 1.5E-40 T 29-03-2018 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 SUPERFAMILY SSF56327 171 448 1.58E-74 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CPU03_RS15560 5f507438e2ba77f844c87c35ac118110 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 1.3E-63 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CPU03_RS06155 ac73d05bdd41a285bb96d7df4e7ce9ab 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 5.1E-68 T 29-03-2018 IPR007452 Translocation and assembly module TamB CPU03_RS06155 ac73d05bdd41a285bb96d7df4e7ce9ab 1258 Pfam PF13502 AsmA-like C-terminal region 255 450 8.8E-6 T 29-03-2018 IPR032712 AsmA-like, C-terminal CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 SUPERFAMILY SSF46609 1 84 1.1E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PIRSF PIRSF000349 1 192 3.5E-86 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 SUPERFAMILY SSF54719 82 191 1.01E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 Gene3D G3DSA:1.10.287.990 20 82 9.7E-27 T 29-03-2018 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 5.1E-40 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.4E-34 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.9E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.9E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS16245 39e74886cff8da58d9a42a9b6ebc1bde 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.9E-22 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 SMART SM00418 10 88 1.7E-21 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 4.2E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 4.2E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 4.2E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 SUPERFAMILY SSF46785 8 91 1.46E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 Gene3D G3DSA:1.10.10.10 1 97 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03080 8025b4c9a37c83eaf51e6ce5a99b1a14 98 Pfam PF01022 Bacterial regulatory protein, arsR family 17 62 2.9E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 5.1E-47 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 Gene3D G3DSA:2.60.15.10 1 90 5.2E-29 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 SUPERFAMILY SSF51344 3 86 9.68E-26 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.5E-12 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 5.0E-38 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 SUPERFAMILY SSF46604 88 137 9.94E-15 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 1.0E-30 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 Gene3D G3DSA:1.20.5.440 91 131 4.6E-13 T 29-03-2018 CPU03_RS08105 ba49baa07dc1e07c0aceee3a5b54b7f2 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.84 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:2.170.220.10 186 254 6.8E-15 T 29-03-2018 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:2.20.28.20 147 180 4.4E-16 T 29-03-2018 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Pfam PF01588 Putative tRNA binding domain 585 678 1.7E-21 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 SUPERFAMILY SSF57770 147 181 8.89E-13 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 SUPERFAMILY SSF52374 10 146 3.05E-100 T 29-03-2018 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 SUPERFAMILY SSF52374 181 392 3.05E-100 T 29-03-2018 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 SUPERFAMILY SSF47323 395 550 1.46E-43 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.8E-25 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Pfam PF09334 tRNA synthetases class I (M) 13 401 5.6E-164 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:3.40.50.620 9 82 2.8E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:3.40.50.620 255 375 1.0E-21 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.25 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 SUPERFAMILY SSF50249 574 680 8.81E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:1.10.730.10 378 542 2.5E-34 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 547 681 4.4E-44 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 540 3.1E-199 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CPU03_RS02455 3c43a3f4dca9647305cd4df32cd8d066 681 Gene3D G3DSA:2.40.50.140 571 681 3.1E-25 T 29-03-2018 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.4E-95 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 Pfam PF01578 Cytochrome C assembly protein 89 296 2.8E-53 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.4E-60 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 5.0E-128 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CPU03_RS13030 8a58d9a7bc60764bb1b8a0889755961e 654 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 8.6E-280 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS11030 027cda0d90b18e8ea1d006fb18e5a068 158 Gene3D G3DSA:1.10.10.10 14 61 1.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11030 027cda0d90b18e8ea1d006fb18e5a068 158 Hamap MF_01114 Regulatory protein RecX [recX]. 7 158 14.599 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CPU03_RS11030 027cda0d90b18e8ea1d006fb18e5a068 158 Gene3D G3DSA:1.10.10.10 62 106 2.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11030 027cda0d90b18e8ea1d006fb18e5a068 158 Pfam PF02631 RecX family 38 154 1.8E-32 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CPU03_RS11030 027cda0d90b18e8ea1d006fb18e5a068 158 Gene3D G3DSA:1.10.10.10 108 157 5.6E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04460 8d46125dac9634a78c848adb3212d826 145 SUPERFAMILY SSF53062 1 125 5.49E-30 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS04460 8d46125dac9634a78c848adb3212d826 145 Pfam PF03610 PTS system fructose IIA component 3 114 1.1E-24 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS04460 8d46125dac9634a78c848adb3212d826 145 Gene3D G3DSA:3.40.50.510 1 143 1.0E-29 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS13060 fd96dcd88942542a1283a34fcfdbbbc6 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 1.4E-40 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CPU03_RS13060 fd96dcd88942542a1283a34fcfdbbbc6 98 Pfam PF04175 Protein of unknown function (DUF406) 7 98 3.3E-39 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CPU03_RS13060 fd96dcd88942542a1283a34fcfdbbbc6 98 Gene3D G3DSA:3.30.70.860 19 98 6.6E-33 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 47 7.3E-14 T 29-03-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 Gene3D G3DSA:2.30.330.10 42 137 2.7E-31 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-26 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.6E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.6E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.6E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.6E-30 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CPU03_RS14385 19c85e73b60bdba80634dd33281b742b 137 SUPERFAMILY SSF101801 53 135 1.31E-27 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 SUPERFAMILY SSF55021 337 411 2.79E-18 T 29-03-2018 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Gene3D G3DSA:3.40.50.720 136 295 6.3E-43 T 29-03-2018 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 SUPERFAMILY SSF51735 108 295 9.48E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Pfam PF01842 ACT domain 347 403 1.9E-7 T 29-03-2018 IPR002912 ACT domain CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Gene3D G3DSA:3.30.70.260 328 411 7.5E-16 T 29-03-2018 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 6.7E-37 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 SUPERFAMILY SSF52283 7 135 9.57E-49 T 29-03-2018 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.4E-54 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS10570 2d8803f0612ed3a46e10a504a6a25ebc 412 Gene3D G3DSA:3.40.50.720 1 135 2.8E-44 T 29-03-2018 CPU03_RS06975 336306f747a07328d22fdd0fcb35049e 474 SUPERFAMILY SSF56954 25 444 2.62E-97 T 29-03-2018 CPU03_RS06975 336306f747a07328d22fdd0fcb35049e 474 Gene3D G3DSA:1.20.1600.10 12 438 1.7E-79 T 29-03-2018 CPU03_RS06975 336306f747a07328d22fdd0fcb35049e 474 Pfam PF02321 Outer membrane efflux protein 233 428 2.2E-33 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CPU03_RS06975 336306f747a07328d22fdd0fcb35049e 474 Pfam PF02321 Outer membrane efflux protein 26 209 2.4E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CPU03_RS06975 336306f747a07328d22fdd0fcb35049e 474 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 442 2.4E-133 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CPU03_RS14340 8b5382bb033c988af8bc7ae73e626986 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 241 49.195 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CPU03_RS14340 8b5382bb033c988af8bc7ae73e626986 243 Pfam PF04288 MukE-like family 10 216 1.4E-124 T 29-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Pfam PF00288 GHMP kinases N terminal domain 117 184 1.1E-14 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Pfam PF10509 Galactokinase galactose-binding signature 14 60 2.8E-21 T 29-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Pfam PF08544 GHMP kinases C terminal 282 364 4.7E-10 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 124 135 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00959 Mevalonate kinase family signature 28 52 3.3E-46 T 29-03-2018 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00959 Mevalonate kinase family signature 122 144 3.3E-46 T 29-03-2018 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00959 Mevalonate kinase family signature 331 348 3.3E-46 T 29-03-2018 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00959 Mevalonate kinase family signature 165 184 3.3E-46 T 29-03-2018 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 SUPERFAMILY SSF54211 5 206 9.11E-64 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PIRSF PIRSF000530 2 385 1.8E-119 T 29-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 ProSitePatterns PS00106 Galactokinase signature. 30 41 - T 29-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Gene3D G3DSA:3.30.230.10 5 209 1.8E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Hamap MF_00246 Galactokinase [galK]. 28 384 43.456 T 29-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 TIGRFAM TIGR00131 gal_kin: galactokinase 10 385 4.2E-152 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00473 Galactokinase signature 266 280 6.5E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00473 Galactokinase signature 95 106 6.5E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00473 Galactokinase signature 115 133 6.5E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 PRINTS PR00473 Galactokinase signature 30 48 6.5E-30 T 29-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 Gene3D G3DSA:3.30.70.890 210 384 5.7E-55 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS12655 1ea9e96d8f9e615e40a06858bfe86986 385 SUPERFAMILY SSF55060 208 384 2.34E-50 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF04539 Sigma-70 region 3 458 533 1.8E-29 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.664 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Gene3D G3DSA:1.10.601.10 3 112 1.2E-12 T 29-03-2018 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Gene3D G3DSA:1.10.601.10 113 448 7.6E-107 T 29-03-2018 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF04546 Sigma-70, non-essential region 137 348 5.8E-74 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.8E-12 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 SUPERFAMILY SSF88659 452 525 1.11E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Gene3D G3DSA:1.10.10.10 541 612 7.7E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 4.6E-37 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 78 1.4E-29 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 SUPERFAMILY SSF88659 509 611 2.32E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 SUPERFAMILY SSF88946 113 446 1.83E-101 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Gene3D G3DSA:1.10.10.10 449 499 4.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 6.6E-121 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05575 2b83099640a5038964ea6856e4efab5f 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS13055 1f154f559228da307b2af2b9fc093489 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 439 1.0E-134 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CPU03_RS13055 1f154f559228da307b2af2b9fc093489 439 SUPERFAMILY SSF56935 27 439 4.12E-101 T 29-03-2018 CPU03_RS13055 1f154f559228da307b2af2b9fc093489 439 Gene3D G3DSA:2.40.160.60 27 439 9.8E-85 T 29-03-2018 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.4E-36 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 SUPERFAMILY SSF53901 3 317 1.27E-72 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 Gene3D G3DSA:3.40.47.10 1 162 2.6E-39 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 Gene3D G3DSA:3.40.47.10 163 317 3.2E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.609 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 2.8E-143 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CPU03_RS14575 8b30abe1ca84933b73828f3f5ca6363f 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 5.2E-30 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CPU03_RS04820 a30e44ec9f6833d99b78a9f3a5064ec6 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.282 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CPU03_RS04820 a30e44ec9f6833d99b78a9f3a5064ec6 330 SUPERFAMILY SSF53659 5 327 8.0E-117 T 29-03-2018 CPU03_RS04820 a30e44ec9f6833d99b78a9f3a5064ec6 330 Gene3D G3DSA:3.40.718.10 2 330 2.7E-132 T 29-03-2018 CPU03_RS04820 a30e44ec9f6833d99b78a9f3a5064ec6 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 2.4E-131 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CPU03_RS04820 a30e44ec9f6833d99b78a9f3a5064ec6 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 2.0E-107 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 SUPERFAMILY SSF69189 292 385 3.34E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 Gene3D G3DSA:2.60.410.10 311 383 5.0E-18 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 SMART SM00936 292 383 1.9E-33 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.4E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.4E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.4E-17 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 Gene3D G3DSA:3.40.710.10 19 310 1.1E-47 T 29-03-2018 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 7.1E-25 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 SUPERFAMILY SSF56601 13 292 8.76E-77 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS12195 9c1a553cffbb4144ed7380cb551dc7c7 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 7.7E-98 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 332 1.1E-48 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 111 125 1.7E-12 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 159 172 1.7E-12 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 1.7E-12 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 Gene3D G3DSA:3.90.120.10 220 327 1.4E-16 T 29-03-2018 CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 333 2.8E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 SUPERFAMILY SSF53335 2 340 3.05E-90 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS10115 77822da471fc8dd5f5f20aee1b9792ff 348 Gene3D G3DSA:3.40.50.150 1 213 2.8E-51 T 29-03-2018 CPU03_RS10310 28519b8a6a93f45f587c386fc1b6a780 213 Pfam PF02502 Ribose/Galactose Isomerase 3 155 4.1E-30 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CPU03_RS10310 28519b8a6a93f45f587c386fc1b6a780 213 SUPERFAMILY SSF89623 2 161 1.44E-35 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CPU03_RS10310 28519b8a6a93f45f587c386fc1b6a780 213 Gene3D G3DSA:3.40.1400.10 1 213 9.6E-54 T 29-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CPU03_RS10310 28519b8a6a93f45f587c386fc1b6a780 213 Pfam PF12408 Ribose-5-phosphate isomerase 163 210 4.6E-18 T 29-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.187 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 250 4.9E-104 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 9.1E-87 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 Gene3D G3DSA:3.40.50.150 3 250 9.8E-45 T 29-03-2018 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CPU03_RS07240 2f8478615fd24e210e96dd23ff6c57c0 251 SUPERFAMILY SSF53335 20 249 2.32E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS14470 b88332d9454eb61f60fd480e5bcffd51 184 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 9 168 1.9E-66 T 29-03-2018 IPR022523 Flagellar regulator, FliZ CPU03_RS14470 b88332d9454eb61f60fd480e5bcffd51 184 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 95 169 3.1E-6 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-26 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 Gene3D G3DSA:3.30.300.130 103 187 3.9E-25 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 SUPERFAMILY SSF89360 1 97 3.34E-21 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.363 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 SUPERFAMILY SSF117916 95 184 1.0E-24 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 5.7E-101 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 Pfam PF01106 NifU-like domain 111 177 4.5E-20 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 5.6E-13 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS09100 5aa74f87f42b308cdfc47eb58c1cf34a 191 Gene3D G3DSA:2.60.300.12 1 102 5.4E-17 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS13690 3883edd6a585ca40c8fe0077c1b6ba75 142 Pfam PF00293 NUDIX domain 5 124 1.1E-23 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS13690 3883edd6a585ca40c8fe0077c1b6ba75 142 Gene3D G3DSA:3.90.79.10 1 141 2.0E-29 T 29-03-2018 CPU03_RS13690 3883edd6a585ca40c8fe0077c1b6ba75 142 SUPERFAMILY SSF55811 6 138 8.39E-31 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS13690 3883edd6a585ca40c8fe0077c1b6ba75 142 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.1E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS13690 3883edd6a585ca40c8fe0077c1b6ba75 142 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.1E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS00840 0e9cb862b03309420a1d474294938f99 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 1.2E-56 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CPU03_RS00840 0e9cb862b03309420a1d474294938f99 348 Gene3D G3DSA:3.90.226.10 48 307 1.7E-33 T 29-03-2018 CPU03_RS00840 0e9cb862b03309420a1d474294938f99 348 Pfam PF01343 Peptidase family S49 160 309 2.1E-46 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CPU03_RS00840 0e9cb862b03309420a1d474294938f99 348 SUPERFAMILY SSF52096 96 208 7.85E-32 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS00840 0e9cb862b03309420a1d474294938f99 348 SUPERFAMILY SSF52096 239 298 7.85E-32 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 SUPERFAMILY SSF51556 63 376 5.9E-100 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 Gene3D G3DSA:2.30.40.10 1 76 4.3E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 Gene3D G3DSA:3.20.20.140 77 392 1.5E-67 T 29-03-2018 CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 SUPERFAMILY SSF51338 9 63 9.93E-21 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 SUPERFAMILY SSF51338 376 448 9.93E-21 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS14315 1164ff1c1ea148cbad3e8d3851dabb8d 456 Pfam PF01979 Amidohydrolase family 60 425 9.0E-61 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS14450 50c06b2702fb1c992c018922d6a11f52 472 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 227 456 1.4E-60 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CPU03_RS14450 50c06b2702fb1c992c018922d6a11f52 472 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 105 7.7E-22 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CPU03_RS14450 50c06b2702fb1c992c018922d6a11f52 472 Gene3D G3DSA:3.90.20.10 387 471 1.5E-5 T 29-03-2018 CPU03_RS07435 9b17c9a603407450d28da0c68f4c9987 359 Gene3D G3DSA:3.40.50.2000 168 339 6.5E-5 T 29-03-2018 CPU03_RS07435 9b17c9a603407450d28da0c68f4c9987 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 4.5E-164 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CPU03_RS07435 9b17c9a603407450d28da0c68f4c9987 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 62.024 T 29-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CPU03_RS11535 39e36f74524801c5d19e37d2583f6d81 349 SUPERFAMILY SSF53850 36 338 2.85E-69 T 29-03-2018 CPU03_RS11535 39e36f74524801c5d19e37d2583f6d81 349 Gene3D G3DSA:3.40.190.10 173 313 7.3E-21 T 29-03-2018 CPU03_RS11535 39e36f74524801c5d19e37d2583f6d81 349 Pfam PF13343 Bacterial extracellular solute-binding protein 81 309 6.4E-21 T 29-03-2018 CPU03_RS11535 39e36f74524801c5d19e37d2583f6d81 349 PIRSF PIRSF002825 9 349 7.3E-79 T 29-03-2018 IPR026045 Ferric binding protein CPU03_RS11535 39e36f74524801c5d19e37d2583f6d81 349 Gene3D G3DSA:3.40.190.10 35 172 1.6E-15 T 29-03-2018 CPU03_RS02050 5cb0940f9a3763839b3518b64819ee55 148 Pfam PF03733 Inner membrane component domain 4 53 1.9E-9 T 29-03-2018 IPR005185 Inner membrane component domain CPU03_RS02050 5cb0940f9a3763839b3518b64819ee55 148 Pfam PF03733 Inner membrane component domain 77 127 1.9E-17 T 29-03-2018 IPR005185 Inner membrane component domain CPU03_RS02050 5cb0940f9a3763839b3518b64819ee55 148 PIRSF PIRSF028777 1 139 1.7E-53 T 29-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Pfam PF12800 4Fe-4S binding domain 138 156 0.021 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Gene3D G3DSA:3.30.70.20 25 70 4.2E-6 T 29-03-2018 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Pfam PF12838 4Fe-4S dicluster domain 61 116 2.5E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Gene3D G3DSA:3.30.70.20 71 103 8.1E-9 T 29-03-2018 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 9 218 4.6E-76 T 29-03-2018 IPR004494 MauM/NapG ferredoxin-type protein CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Gene3D G3DSA:3.30.70.20 104 144 2.8E-8 T 29-03-2018 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Gene3D G3DSA:3.30.70.20 145 193 6.8E-10 T 29-03-2018 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 Gene3D G3DSA:3.30.70.20 194 246 0.003 T 29-03-2018 CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 39 5.4E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS02810 af2147b9c3b5616bc05eb97b73ddc315 250 SUPERFAMILY SSF54862 61 206 5.86E-26 T 29-03-2018 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 SUPERFAMILY SSF53850 23 245 1.42E-42 T 29-03-2018 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 Gene3D G3DSA:3.40.190.10 114 207 1.9E-14 T 29-03-2018 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 Pfam PF13531 Bacterial extracellular solute-binding protein 24 243 4.8E-44 T 29-03-2018 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 239 3.6E-21 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 Gene3D G3DSA:3.40.190.10 18 113 4.9E-13 T 29-03-2018 CPU03_RS03645 7476b96b9111f8edb3872054e456b36e 248 PIRSF PIRSF004846 5 247 6.6E-39 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 PIRSF PIRSF015617 1 196 1.3E-66 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 Gene3D G3DSA:3.40.50.300 6 196 4.5E-70 T 29-03-2018 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 2 21 4.1E-6 T 29-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 3.7E-58 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 5.2E-75 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CPU03_RS00850 a205da2e99f09f790c8b26eba355757f 196 SUPERFAMILY SSF52540 7 196 1.72E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16625 e68e39fb8f7f88a1658fb269b39f8bcc 68 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 9 64 3.0E-6 T 29-03-2018 IPR015065 Surface composition regulator CPU03_RS16625 e68e39fb8f7f88a1658fb269b39f8bcc 68 Pfam PF08971 Glycogen synthesis protein 11 63 7.1E-20 T 29-03-2018 IPR015065 Surface composition regulator CPU03_RS16625 e68e39fb8f7f88a1658fb269b39f8bcc 68 SUPERFAMILY SSF109747 10 64 2.48E-11 T 29-03-2018 IPR015065 Surface composition regulator CPU03_RS16625 e68e39fb8f7f88a1658fb269b39f8bcc 68 Gene3D G3DSA:1.20.970.20 15 64 1.2E-20 T 29-03-2018 CPU03_RS16625 e68e39fb8f7f88a1658fb269b39f8bcc 68 Hamap MF_00525 Surface composition regulator [glgS]. 6 65 19.963 T 29-03-2018 IPR015065 Surface composition regulator CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 SUPERFAMILY SSF46785 175 306 5.45E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 SUPERFAMILY SSF50475 9 159 1.91E-48 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 Gene3D G3DSA:1.10.10.10 175 315 8.2E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 SMART SM00903 18 161 7.7E-60 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 Pfam PF01613 Flavin reductase like domain 19 159 1.2E-33 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CPU03_RS15335 5255bddfebd542396492f69e434691ab 318 Gene3D G3DSA:2.30.110.10 6 172 4.8E-41 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.6E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.6E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.6E-13 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 Gene3D G3DSA:2.10.109.10 80 198 3.1E-26 T 29-03-2018 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.867 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 SUPERFAMILY SSF46785 3 69 2.01E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 Pfam PF01726 LexA DNA binding domain 1 65 1.6E-30 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 Pfam PF00717 Peptidase S24-like 114 179 4.1E-15 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 Gene3D G3DSA:1.10.10.10 1 70 1.7E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 2.7E-83 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CPU03_RS06805 51e021cdd33ec29f27dcf3d86dc4232a 202 SUPERFAMILY SSF51306 76 198 4.53E-39 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 9.2E-202 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 108.856 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 Gene3D G3DSA:3.40.640.10 179 310 2.9E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 SUPERFAMILY SSF53383 2 425 4.45E-141 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 Gene3D G3DSA:3.90.1150.10 1 178 6.3E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 Gene3D G3DSA:3.90.1150.10 311 426 9.0E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11450 e43d6dde6f8b2195996a40cea04cffd7 427 Pfam PF00202 Aminotransferase class-III 32 396 9.3E-81 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 Gene3D G3DSA:3.20.70.20 250 477 2.3E-30 T 29-03-2018 CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 PIRSF PIRSF028991 6 516 7.2E-245 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 Gene3D G3DSA:3.20.70.20 76 249 5.7E-18 T 29-03-2018 CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 1.7E-209 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 SUPERFAMILY SSF51998 16 480 1.04E-82 T 29-03-2018 CPU03_RS05420 b34ca8ebabb05eedae5b31a8eab53fa5 516 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 15 504 1.1E-216 T 29-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 SMART SM00382 40 228 2.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 Gene3D G3DSA:3.40.50.300 7 239 1.8E-64 T 29-03-2018 CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 11 230 7.8E-108 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 Pfam PF00005 ABC transporter 31 179 2.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14730 365ff4431e49c1e19c2cd39cd4aa021c 239 SUPERFAMILY SSF52540 11 232 8.23E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13605 70ce83eed7b1c94fb904c10f4131499d 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 308 1.2E-34 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS13605 70ce83eed7b1c94fb904c10f4131499d 331 SUPERFAMILY SSF55073 163 309 3.69E-35 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS13605 70ce83eed7b1c94fb904c10f4131499d 331 Gene3D G3DSA:3.30.70.270 147 312 7.4E-42 T 29-03-2018 CPU03_RS13605 70ce83eed7b1c94fb904c10f4131499d 331 SMART SM00267 147 310 7.2E-47 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS13605 70ce83eed7b1c94fb904c10f4131499d 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 305 9.3E-35 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 Gene3D G3DSA:3.40.50.300 157 419 3.4E-26 T 29-03-2018 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 SUPERFAMILY SSF54980 366 422 2.81E-13 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 9.3E-29 T 29-03-2018 IPR032305 GTP-binding protein, middle domain CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.3E-31 T 29-03-2018 IPR025121 GTPase HflX, N-terminal CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 SUPERFAMILY SSF52540 197 373 5.49E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.1E-152 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 6.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 6.4E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.521 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.3E-20 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06290 4c4e575374ab90c5b5c1d6400d33881c 426 PIRSF PIRSF006809 3 421 5.1E-147 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 CPU03_RS15440 81b413ffd2f347178f08ac5cc4bb7bc6 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 263 2.9E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15440 81b413ffd2f347178f08ac5cc4bb7bc6 265 SUPERFAMILY SSF161098 18 253 3.4E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15440 81b413ffd2f347178f08ac5cc4bb7bc6 265 TIGRFAM TIGR03255 PhnV: 2-aminoethylphosphonate ABC transport system, membrane component PhnV 2 263 2.6E-117 T 29-03-2018 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV GO:0006810|GO:0016020 CPU03_RS15440 81b413ffd2f347178f08ac5cc4bb7bc6 265 Gene3D G3DSA:1.10.3720.10 10 265 1.7E-34 T 29-03-2018 CPU03_RS13275 a499a6b230be79a1e1c870ca21194c6d 406 Gene3D G3DSA:3.40.640.10 53 280 3.7E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS13275 a499a6b230be79a1e1c870ca21194c6d 406 Gene3D G3DSA:3.90.1150.10 281 405 1.4E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS13275 a499a6b230be79a1e1c870ca21194c6d 406 Pfam PF00155 Aminotransferase class I and II 35 390 1.2E-47 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS13275 a499a6b230be79a1e1c870ca21194c6d 406 SUPERFAMILY SSF53383 7 402 3.99E-94 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS15250 0161c2bfb6c8f817a159f6094e199af6 285 Pfam PF11392 Protein of unknown function (DUF2877) 167 277 9.9E-27 T 29-03-2018 IPR021530 Protein of unknown function DUF2877 CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 3.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 SUPERFAMILY SSF46785 15 96 1.19E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 Pfam PF03466 LysR substrate binding domain 103 305 3.1E-14 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 Gene3D G3DSA:3.40.190.10 103 196 6.3E-7 T 29-03-2018 CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 SUPERFAMILY SSF53850 102 303 2.35E-20 T 29-03-2018 CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 Gene3D G3DSA:3.40.190.10 197 278 7.8E-11 T 29-03-2018 CPU03_RS03045 9225fa11dc72e33e9173374d889d8f26 314 Gene3D G3DSA:1.10.10.10 10 102 2.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 Gene3D G3DSA:2.30.30.410 19 90 9.4E-8 T 29-03-2018 CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 SMART SM00287 23 89 1.9E-9 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 Gene3D G3DSA:1.20.5.50 91 170 1.2E-8 T 29-03-2018 CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 Pfam PF08239 Bacterial SH3 domain 34 80 3.1E-7 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 203 5.8E-51 T 29-03-2018 IPR016476 SH3 domain protein CPU03_RS05535 411e671e0fc6f8f63004e8644c83c9ba 205 PIRSF PIRSF006158 1 204 1.7E-67 T 29-03-2018 IPR016476 SH3 domain protein CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 2.3E-32 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 SUPERFAMILY SSF51735 1 194 1.52E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 PIRSF PIRSF000124 1 388 6.2E-138 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 5.5E-7 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.8E-103 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Gene3D G3DSA:3.40.50.720 1 193 4.5E-51 T 29-03-2018 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Gene3D G3DSA:1.20.5.100 194 211 4.9E-14 T 29-03-2018 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Gene3D G3DSA:3.40.50.720 288 388 5.5E-17 T 29-03-2018 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 SUPERFAMILY SSF48179 191 287 1.26E-30 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 SMART SM00984 300 387 1.3E-11 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.8E-27 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 SUPERFAMILY SSF52413 283 388 2.35E-27 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 Gene3D G3DSA:1.10.1040.10 212 287 3.5E-28 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 PIRSF PIRSF500134 338 388 0.0044 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CPU03_RS02355 de2221fea25dd01a934d04a11c110726 388 PIRSF PIRSF500134 1 344 1.1E-120 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 Gene3D G3DSA:1.10.1240.20 401 469 1.5E-20 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 Gene3D G3DSA:1.10.530.10 470 642 8.7E-41 T 29-03-2018 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 SUPERFAMILY SSF48435 26 474 1.7E-128 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 Gene3D G3DSA:1.25.20.10 26 387 7.8E-54 T 29-03-2018 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 498 526 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 403 469 2.5E-25 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 SUPERFAMILY SSF53955 476 632 9.07E-49 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS05135 310f25bc11c74ecc69e2869ba4f7416d 642 Pfam PF01464 Transglycosylase SLT domain 481 592 3.9E-31 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS11170 0e5127b5c8aaafbd59ce89b720ae8c02 112 Gene3D G3DSA:3.30.160.100 1 99 4.5E-27 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS11170 0e5127b5c8aaafbd59ce89b720ae8c02 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 7.5E-23 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS11170 0e5127b5c8aaafbd59ce89b720ae8c02 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.2E-34 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS11170 0e5127b5c8aaafbd59ce89b720ae8c02 112 SUPERFAMILY SSF69754 3 104 1.1E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS02545 bcf35332983df50fb033062b2208603d 263 Gene3D G3DSA:3.40.50.620 38 175 5.2E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02545 bcf35332983df50fb033062b2208603d 263 PIRSF PIRSF005011 2 251 6.2E-139 T 29-03-2018 IPR023604 Uncharacterised protein family SanA CPU03_RS02545 bcf35332983df50fb033062b2208603d 263 Pfam PF02698 DUF218 domain 50 170 9.2E-18 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.476 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Gene3D G3DSA:1.10.150.20 526 567 0.048 T 29-03-2018 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Pfam PF02151 UvrB/uvrC motif 206 237 9.1E-10 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 7.9E-9 T 29-03-2018 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SUPERFAMILY SSF82771 17 100 3.53E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Gene3D G3DSA:4.10.860.10 182 240 3.9E-14 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SMART SM00465 17 98 2.1E-22 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.3E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Gene3D G3DSA:3.40.1440.10 7 101 4.2E-24 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Gene3D G3DSA:1.10.150.20 568 610 3.9E-12 T 29-03-2018 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 2.0E-222 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SMART SM00278 556 575 0.17 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SMART SM00278 588 607 39.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SUPERFAMILY SSF47781 523 609 3.81E-18 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 SUPERFAMILY SSF46600 191 243 3.14E-13 T 29-03-2018 IPR001943 UVR domain GO:0005515 CPU03_RS14825 37d86167093fda36a0d8e2727dc4eee0 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 542 1.7E-45 T 29-03-2018 IPR001162 UvrC family homology region CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 SUPERFAMILY SSF55129 3 59 5.36E-22 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.0E-27 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 Gene3D G3DSA:3.30.1390.20 5 59 8.4E-25 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 PIRSF PIRSF002211 1 59 9.7E-30 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 3.8E-20 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.459 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09470 aa553ab4c1f448e247b1961ccbedfd01 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 29-03-2018 IPR018038 Ribosomal protein L30, conserved site CPU03_RS09390 f75b2c9a21cced2f439b6d7a7b4a294a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.434 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09390 f75b2c9a21cced2f439b6d7a7b4a294a 100 Pfam PF00276 Ribosomal protein L23 9 95 9.2E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09390 f75b2c9a21cced2f439b6d7a7b4a294a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 29-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09390 f75b2c9a21cced2f439b6d7a7b4a294a 100 SUPERFAMILY SSF54189 3 92 1.8E-30 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09390 f75b2c9a21cced2f439b6d7a7b4a294a 100 Gene3D G3DSA:3.30.70.330 6 100 7.4E-31 T 29-03-2018 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 1.5E-56 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 SUPERFAMILY SSF52540 1 210 6.64E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 Gene3D G3DSA:3.40.50.300 1 140 1.7E-16 T 29-03-2018 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 Gene3D G3DSA:1.10.8.60 143 222 5.4E-23 T 29-03-2018 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 SUPERFAMILY SSF48019 212 335 3.91E-35 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 Gene3D G3DSA:1.20.272.10 223 343 1.6E-27 T 29-03-2018 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.3E-40 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CPU03_RS12230 476154a5ccf0d8163a407c1c46bf8cb9 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.2E-98 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CPU03_RS02850 66ab7aca8b8f1a97d19a3b570ef99207 127 Pfam PF03960 ArsC family 13 121 5.5E-18 T 29-03-2018 IPR006660 Arsenate reductase-like CPU03_RS02850 66ab7aca8b8f1a97d19a3b570ef99207 127 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 12 121 1.2E-32 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CPU03_RS02850 66ab7aca8b8f1a97d19a3b570ef99207 127 SUPERFAMILY SSF52833 11 122 1.9E-33 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS02850 66ab7aca8b8f1a97d19a3b570ef99207 127 Gene3D G3DSA:3.40.30.10 10 123 1.8E-35 T 29-03-2018 CPU03_RS03320 8d0bfc8bdb131a1fdb756868d612d170 113 Gene3D G3DSA:1.10.150.20 21 69 4.0E-4 T 29-03-2018 CPU03_RS03320 8d0bfc8bdb131a1fdb756868d612d170 113 Gene3D G3DSA:1.10.150.310 70 113 6.1E-12 T 29-03-2018 CPU03_RS03320 8d0bfc8bdb131a1fdb756868d612d170 113 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 48 112 6.2E-25 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CPU03_RS03320 8d0bfc8bdb131a1fdb756868d612d170 113 SUPERFAMILY SSF47781 42 110 6.34E-21 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS03320 8d0bfc8bdb131a1fdb756868d612d170 113 Pfam PF12836 Helix-hairpin-helix motif 49 111 3.4E-18 T 29-03-2018 CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 Gene3D G3DSA:3.40.50.2300 1 208 6.5E-29 T 29-03-2018 CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 PIRSF PIRSF006171 2 228 2.3E-73 T 29-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 SMART SM00448 4 117 7.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 SUPERFAMILY SSF52172 1 190 7.4E-31 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 Pfam PF00072 Response regulator receiver domain 6 117 7.1E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06810 c415e5d3cac7fb95321f153497d0d021 228 Pfam PF12431 Transcriptional regulator 133 161 2.4E-9 T 29-03-2018 IPR028141 Transcriptional regulator CPU03_RS10410 d20dafa6d750f7a686de6a474eae7222 146 Gene3D G3DSA:3.40.630.30 1 146 2.3E-17 T 29-03-2018 CPU03_RS10410 d20dafa6d750f7a686de6a474eae7222 146 Pfam PF00583 Acetyltransferase (GNAT) family 46 132 4.2E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS10410 d20dafa6d750f7a686de6a474eae7222 146 SUPERFAMILY SSF55729 1 143 4.08E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS09060 c1fbee74730e399444b7dee0bcfecd0a 697 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 105 689 1.1E-232 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CPU03_RS09060 c1fbee74730e399444b7dee0bcfecd0a 697 Pfam PF02446 4-alpha-glucanotransferase 151 668 7.4E-132 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CPU03_RS09060 c1fbee74730e399444b7dee0bcfecd0a 697 SUPERFAMILY SSF51445 603 690 4.28E-150 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS09060 c1fbee74730e399444b7dee0bcfecd0a 697 SUPERFAMILY SSF51445 134 564 4.28E-150 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS09060 c1fbee74730e399444b7dee0bcfecd0a 697 Gene3D G3DSA:3.20.20.80 141 691 3.0E-163 T 29-03-2018 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 SUPERFAMILY SSF64263 1 119 2.75E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09510 51c18a997ee6de84b2f2d6e3ef1d3c59 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 275 31.897 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 281 3.0E-100 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 Pfam PF08544 GHMP kinases C terminal 214 260 2.6E-4 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 Pfam PF00288 GHMP kinases N terminal domain 91 148 8.6E-11 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 SUPERFAMILY SSF55060 165 280 2.88E-35 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 SUPERFAMILY SSF54211 7 161 5.84E-45 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 Gene3D G3DSA:3.30.70.890 165 282 1.2E-26 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 PIRSF PIRSF010376 4 283 8.9E-83 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CPU03_RS01620 68dcd26dc3293c152a529df07642daaa 293 Gene3D G3DSA:3.30.230.10 6 164 1.8E-44 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.1E-24 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 Pfam PF01165 Ribosomal protein S21 4 56 3.9E-22 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.5E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.5E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.5E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.5E-17 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 8.0E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 Gene3D G3DSA:1.20.5.1150 16 52 8.8E-18 T 29-03-2018 CPU03_RS05565 c2aa9a44ba497ecc7815287b25ba4baf 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.969 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 PIRSF PIRSF005650 4 241 9.6E-90 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 Pfam PF00696 Amino acid kinase family 11 219 6.5E-27 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 Gene3D G3DSA:3.40.1160.10 2 241 6.6E-44 T 29-03-2018 CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 SUPERFAMILY SSF53633 7 240 5.5E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.866 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CPU03_RS04180 fafe1f74d7dd08cb3ba46f0d9508187c 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 6.6E-104 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CPU03_RS00555 a6ebf04e255179fd11461730ef03d9a1 180 SUPERFAMILY SSF53474 2 176 1.49E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS00555 a6ebf04e255179fd11461730ef03d9a1 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.065 T 29-03-2018 IPR022987 Uncharacterised protein family UPF0227 CPU03_RS00555 a6ebf04e255179fd11461730ef03d9a1 180 Gene3D G3DSA:3.40.50.1820 1 177 5.7E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS00555 a6ebf04e255179fd11461730ef03d9a1 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.1E-65 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 Gene3D G3DSA:3.40.50.300 110 272 5.6E-23 T 29-03-2018 CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 Pfam PF03193 RsgA GTPase 96 273 2.1E-55 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 330 3.2E-95 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 Gene3D G3DSA:2.40.50.140 35 98 6.2E-19 T 29-03-2018 CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 SUPERFAMILY SSF52540 110 338 9.55E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 Gene3D G3DSA:1.10.40.50 274 341 9.0E-23 T 29-03-2018 CPU03_RS06350 50093d00c6d8b4882c8f0edeef4b870c 347 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 337 38.256 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CPU03_RS14300 c7a584c2ec3514f800a935e588d40bab 250 Gene3D G3DSA:3.90.550.10 1 250 2.1E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS14300 c7a584c2ec3514f800a935e588d40bab 250 Pfam PF02348 Cytidylyltransferase 4 221 3.1E-69 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CPU03_RS14300 c7a584c2ec3514f800a935e588d40bab 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 1.1E-119 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CPU03_RS14300 c7a584c2ec3514f800a935e588d40bab 250 SUPERFAMILY SSF53448 3 246 1.06E-66 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS14300 c7a584c2ec3514f800a935e588d40bab 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.477 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.093 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 Gene3D G3DSA:1.10.455.10 6 156 4.6E-61 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 SUPERFAMILY SSF47973 6 149 1.28E-59 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 PIRSF PIRSF002122 3 156 4.3E-63 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.8E-71 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09360 663db7635873bc2a35f72894cda962fc 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.5E-64 T 29-03-2018 IPR023798 Ribosomal protein S7 domain CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 SMART SM00919 163 401 1.4E-136 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.2E-27 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Gene3D G3DSA:3.40.718.10 447 717 8.8E-51 T 29-03-2018 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Gene3D G3DSA:3.40.50.10380 5 160 3.5E-35 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 SMART SM01274 18 151 4.4E-79 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 SUPERFAMILY SSF53659 430 754 2.47E-90 T 29-03-2018 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 8.7E-17 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 7.3E-97 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 SUPERFAMILY SSF53223 10 161 7.91E-53 T 29-03-2018 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 PIRSF PIRSF036684 1 759 0.0 T 29-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 Gene3D G3DSA:3.40.50.720 161 446 3.2E-82 T 29-03-2018 CPU03_RS02760 00c2152e9595df97b014fbc046e02563 759 SUPERFAMILY SSF51735 163 453 1.08E-84 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09325 21e36c1c31e6c14ecaa32f21cf6d8535 77 Hamap MF_00715 Protein SlyX [slyX]. 10 77 17.167 T 29-03-2018 IPR007236 SlyX CPU03_RS09325 21e36c1c31e6c14ecaa32f21cf6d8535 77 Pfam PF04102 SlyX 11 77 1.1E-23 T 29-03-2018 IPR007236 SlyX CPU03_RS09325 21e36c1c31e6c14ecaa32f21cf6d8535 77 Gene3D G3DSA:1.20.5.300 9 55 3.9E-16 T 29-03-2018 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 Gene3D G3DSA:1.10.3860.10 5 403 6.1E-72 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 SUPERFAMILY SSF118215 16 397 9.94E-97 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 4 405 36.792 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 221 240 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 42 67 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 5.0E-15 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05850 d2c2cb66e668775e179ec519f8d71a59 413 Pfam PF00375 Sodium:dicarboxylate symporter family 16 395 1.9E-63 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 SUPERFAMILY SSF51556 56 354 1.84E-56 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 Pfam PF01979 Amidohydrolase family 53 410 6.5E-46 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 SUPERFAMILY SSF51338 1 56 1.11E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 SUPERFAMILY SSF51338 361 435 1.11E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 1.5E-212 T 29-03-2018 IPR017700 Putative aminohydrolase SsnA CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 Gene3D G3DSA:3.20.20.140 68 353 1.9E-29 T 29-03-2018 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 Gene3D G3DSA:2.30.40.10 1 67 3.7E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09755 62a25b1699f7c80261d6e7633fbe27ad 442 Gene3D G3DSA:2.30.40.10 354 439 5.9E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 3.6E-83 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 Gene3D G3DSA:3.20.20.70 1 258 1.1E-81 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 SUPERFAMILY SSF51569 7 247 5.97E-81 T 29-03-2018 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 54.401 T 29-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 Pfam PF01791 DeoC/LacD family aldolase 13 244 1.2E-48 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 PIRSF PIRSF001357 5 254 3.2E-78 T 29-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CPU03_RS05415 433999520d3d0e2e21bdd88e003376de 259 SMART SM01133 10 246 4.1E-81 T 29-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CPU03_RS05680 a0b458f08fba268459180d6534506747 174 Pfam PF06891 P2 phage tail completion protein R (GpR) 5 139 4.5E-23 T 29-03-2018 IPR009678 Bacteriophage tail completion protein R CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 Gene3D G3DSA:3.40.50.720 1 195 4.8E-53 T 29-03-2018 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 PIRSF PIRSF000203 1 507 1.7E-276 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 29-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.3E-52 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 SUPERFAMILY SSF52283 1 168 2.55E-56 T 29-03-2018 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 SMART SM01002 146 311 3.0E-85 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 1.7E-289 T 29-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 1.6E-35 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 Gene3D G3DSA:3.40.50.720 196 377 5.3E-59 T 29-03-2018 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 29-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.8E-76 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 SUPERFAMILY SSF51735 137 317 2.08E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS16540 fb473d6b0d570d25f6eec30395082a48 508 SMART SM01003 4 137 5.4E-76 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 Gene3D G3DSA:3.30.70.920 55 148 2.3E-26 T 29-03-2018 CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 Gene3D G3DSA:1.10.10.10 3 54 1.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.4E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.4E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.4E-11 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 SUPERFAMILY SSF46785 1 61 8.41E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 SUPERFAMILY SSF54909 62 151 7.69E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 3.1E-20 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 SMART SM00344 2 111 2.5E-38 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CPU03_RS03300 a2116f7b0076f5eba30069d4824aa70c 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 8.8E-17 T 29-03-2018 CPU03_RS17140 e180804bcc9ea7649841436ab1d76315 123 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 19 119 1.3E-35 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CPU03_RS17140 e180804bcc9ea7649841436ab1d76315 123 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 12 120 1.7E-43 T 29-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 SUPERFAMILY SSF46689 146 185 5.67E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 Gene3D G3DSA:1.10.10.60 140 186 1.6E-7 T 29-03-2018 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 Gene3D G3DSA:1.20.5.40 114 139 2.1E-15 T 29-03-2018 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 SMART SM00857 5 144 4.2E-52 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 Pfam PF00239 Resolvase, N terminal domain 5 144 8.2E-37 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 SUPERFAMILY SSF53041 3 144 2.75E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CPU03_RS10720 a732246dc3c06ba2178b0a319183cba5 188 Gene3D G3DSA:3.40.50.1390 1 113 4.3E-32 T 29-03-2018 CPU03_RS07595 53fcd8ab52a1d04cb69d16c1c1f121d4 312 Pfam PF00535 Glycosyl transferase family 2 8 177 1.7E-20 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS07595 53fcd8ab52a1d04cb69d16c1c1f121d4 312 SUPERFAMILY SSF53448 5 233 1.03E-33 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07595 53fcd8ab52a1d04cb69d16c1c1f121d4 312 Gene3D G3DSA:3.90.550.10 5 230 4.6E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02750 a4e1a1014950baca343ae08389990602 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 148 6.7E-45 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CPU03_RS02750 a4e1a1014950baca343ae08389990602 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 29.701 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 CPU03_RS02735 b19486b5c49cdbf05ecac90314dd68c3 141 Gene3D G3DSA:3.40.630.30 1 135 6.3E-32 T 29-03-2018 CPU03_RS02735 b19486b5c49cdbf05ecac90314dd68c3 141 SUPERFAMILY SSF55729 1 128 3.22E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS02735 b19486b5c49cdbf05ecac90314dd68c3 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 45.633 T 29-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 CPU03_RS02735 b19486b5c49cdbf05ecac90314dd68c3 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 1.9E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 Gene3D G3DSA:1.25.40.10 77 219 2.8E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 SUPERFAMILY SSF48452 164 210 6.01E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 SUPERFAMILY SSF48452 308 383 6.01E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 Gene3D G3DSA:1.25.40.10 222 397 2.1E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 9.5E-125 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CPU03_RS07400 e3eab6916a11efe9601d94b10d13382b 399 Pfam PF07219 HemY protein N-terminus 26 132 8.3E-36 T 29-03-2018 IPR010817 HemY, N-terminal CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Gene3D G3DSA:3.30.65.10 56 98 4.2E-16 T 29-03-2018 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Gene3D G3DSA:3.30.65.10 142 176 0.29 T 29-03-2018 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Gene3D G3DSA:3.30.65.10 8 55 1.7E-17 T 29-03-2018 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Gene3D G3DSA:3.30.65.10 99 141 5.4E-12 T 29-03-2018 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 61 97 2.6E-16 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 144 166 0.54 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 3.8E-16 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 141 2.5E-14 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 SUPERFAMILY SSF57783 12 55 2.21E-14 T 29-03-2018 CPU03_RS09565 036c4980582def367e00a45a62d1691a 186 SUPERFAMILY SSF57783 59 99 5.27E-14 T 29-03-2018 CPU03_RS15650 b3b9a232e2b1008549c287b46429f005 358 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 9.9E-124 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CPU03_RS15650 b3b9a232e2b1008549c287b46429f005 358 Pfam PF01758 Sodium Bile acid symporter family 63 257 7.4E-39 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CPU03_RS15650 b3b9a232e2b1008549c287b46429f005 358 PIRSF PIRSF005508 3 356 4.9E-121 T 29-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 Gene3D G3DSA:2.60.98.20 146 293 5.1E-31 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 Pfam PF00460 Flagella basal body rod protein 4 33 7.4E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 393 2.8E-99 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 Pfam PF07559 Flagellar basal body protein FlaE 174 292 1.5E-21 T 29-03-2018 IPR011491 Flagellar hook protein FlgE CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 SUPERFAMILY SSF117143 73 372 1.83E-83 T 29-03-2018 CPU03_RS02220 49e3175cd5f5f26c9452a6144808c991 411 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 333 410 5.5E-21 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 SUPERFAMILY SSF53659 5 417 2.52E-146 T 29-03-2018 CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 Gene3D G3DSA:3.40.718.10 9 417 9.8E-134 T 29-03-2018 CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 SMART SM01329 29 413 2.5E-179 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 4.7E-117 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CPU03_RS14805 d7de09ccf6677c314f16a0adcaf860ed 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 8.6E-231 T 29-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CPU03_RS01795 bfc404e49b8a6d4cfc58d20f4853f65a 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 2.0E-88 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CPU03_RS01795 bfc404e49b8a6d4cfc58d20f4853f65a 193 PIRSF PIRSF003159 1 182 5.7E-88 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CPU03_RS01795 bfc404e49b8a6d4cfc58d20f4853f65a 193 SUPERFAMILY SSF160930 5 161 2.88E-62 T 29-03-2018 CPU03_RS01795 bfc404e49b8a6d4cfc58d20f4853f65a 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 7.8E-82 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CPU03_RS01795 bfc404e49b8a6d4cfc58d20f4853f65a 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 44.973 T 29-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CPU03_RS04590 3996fa5d7d93c0f4ea44a4e57d3b37d5 439 Gene3D G3DSA:3.40.50.300 196 438 1.3E-49 T 29-03-2018 CPU03_RS04590 3996fa5d7d93c0f4ea44a4e57d3b37d5 439 Pfam PF00437 Type II/IV secretion system protein 76 340 3.5E-75 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CPU03_RS04590 3996fa5d7d93c0f4ea44a4e57d3b37d5 439 SUPERFAMILY SSF52540 59 431 8.75E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04590 3996fa5d7d93c0f4ea44a4e57d3b37d5 439 Gene3D G3DSA:3.30.450.90 52 173 7.5E-39 T 29-03-2018 CPU03_RS04590 3996fa5d7d93c0f4ea44a4e57d3b37d5 439 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 268 282 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 Gene3D G3DSA:3.90.20.20 2 134 3.0E-28 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 Gene3D G3DSA:2.30.22.10 135 191 1.1E-20 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 SUPERFAMILY SSF58014 40 135 3.4E-27 T 29-03-2018 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 ProSitePatterns PS01071 grpE protein signature. 146 189 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 Hamap MF_01151 Protein GrpE [grpE]. 3 191 21.548 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 PRINTS PR00773 GrpE protein signature 88 103 3.0E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 PRINTS PR00773 GrpE protein signature 170 189 3.0E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 PRINTS PR00773 GrpE protein signature 60 76 3.0E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 PRINTS PR00773 GrpE protein signature 143 158 3.0E-27 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 SUPERFAMILY SSF51064 136 191 4.71E-18 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CPU03_RS11700 2575a52749dd5e976b4538d4f20f23be 192 Pfam PF01025 GrpE 25 191 2.0E-49 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CPU03_RS06725 6a53ef2ec467336b8b9f927f6a32af93 215 Gene3D G3DSA:1.10.3480.10 3 191 6.8E-19 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06725 6a53ef2ec467336b8b9f927f6a32af93 215 Pfam PF02613 Nitrate reductase delta subunit 38 122 2.6E-6 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06725 6a53ef2ec467336b8b9f927f6a32af93 215 SUPERFAMILY SSF89155 4 163 9.68E-20 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06725 6a53ef2ec467336b8b9f927f6a32af93 215 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 133 6.5E-28 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.925 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 283 2.5E-116 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 Pfam PF00889 Elongation factor TS 73 265 4.0E-67 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 Gene3D G3DSA:3.30.479.20 57 143 2.5E-16 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 Gene3D G3DSA:3.30.479.20 145 281 2.0E-48 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 Gene3D G3DSA:1.10.8.10 1 56 3.5E-25 T 29-03-2018 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 SUPERFAMILY SSF46934 3 56 8.06E-19 T 29-03-2018 IPR009060 UBA-like GO:0005515 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 SUPERFAMILY SSF54713 144 283 1.44E-52 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS04185 5f559afa33f4b0f6a7ef692f7e6ba10d 285 SUPERFAMILY SSF54713 56 138 1.07E-21 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 Gene3D G3DSA:3.40.50.720 2 170 4.5E-16 T 29-03-2018 CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 Gene3D G3DSA:3.90.25.10 171 200 6.3E-7 T 29-03-2018 CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 Gene3D G3DSA:3.90.25.10 201 278 2.0E-21 T 29-03-2018 CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 291 1.5E-95 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 SUPERFAMILY SSF51735 1 293 5.83E-100 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02415 c97cf8cfa0634619cfa165e1c4158ea2 296 Pfam PF04321 RmlD substrate binding domain 1 292 1.9E-102 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CPU03_RS14660 b76a4195b8388a8d0a21949d32455cbe 220 Pfam PF09335 SNARE associated Golgi protein 48 172 4.3E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 Pfam PF02300 Fumarate reductase subunit C 5 130 4.2E-52 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 4 130 27.204 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 Gene3D G3DSA:1.20.1300.10 5 130 7.2E-52 T 29-03-2018 CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 PIRSF PIRSF000180 4 132 1.2E-53 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 SUPERFAMILY SSF81343 5 131 9.32E-55 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06380 337d572c63b3ae121f42998f235ff425 132 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 10 113 5.0E-35 T 29-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 538 3.6E-282 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 SUPERFAMILY SSF53795 228 538 2.2E-127 T 29-03-2018 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 54.946 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 PIRSF PIRSF006294 2 539 3.9E-226 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 8.7E-210 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 Gene3D G3DSA:3.40.449.10 22 226 1.4E-76 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 Gene3D G3DSA:3.90.228.20 307 537 1.1E-91 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 Gene3D G3DSA:3.90.228.20 227 306 4.3E-28 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CPU03_RS09155 2da4ac9124ec0076b52f157fcada2f39 539 SUPERFAMILY SSF68923 9 226 2.27E-90 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 8.3E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 Pfam PF09209 Domain of unknown function (DUF1956) 105 226 5.7E-27 T 29-03-2018 IPR015292 Transcription regulator YbiH, C-terminal CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 SUPERFAMILY SSF46689 13 85 6.16E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 Gene3D G3DSA:1.10.357.10 61 231 1.4E-30 T 29-03-2018 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 Gene3D G3DSA:1.10.10.60 2 60 1.0E-17 T 29-03-2018 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 SUPERFAMILY SSF48498 102 227 6.23E-28 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 6.3E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS13570 77441d002cc1e84b8bc55edd01143dae 247 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 6.3E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS09655 77fc2a0e1a89f83afd55bd01bb277dc8 386 ProSitePatterns PS00336 Beta-lactamase class-C active site. 85 92 - T 29-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 CPU03_RS09655 77fc2a0e1a89f83afd55bd01bb277dc8 386 Gene3D G3DSA:3.40.710.10 25 386 3.9E-67 T 29-03-2018 CPU03_RS09655 77fc2a0e1a89f83afd55bd01bb277dc8 386 Pfam PF00144 Beta-lactamase 37 385 9.0E-77 T 29-03-2018 IPR001466 Beta-lactamase-related CPU03_RS09655 77fc2a0e1a89f83afd55bd01bb277dc8 386 SUPERFAMILY SSF56601 36 385 1.52E-94 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 Pfam PF01228 Glycine radical 14 108 2.4E-22 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 PIRSF PIRSF000378 2 127 1.2E-54 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 SUPERFAMILY SSF51998 30 125 1.42E-25 T 29-03-2018 CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.409 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.8E-70 T 29-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS11710 fb19825cfba5e07e0ef9346ec60708ce 127 Gene3D G3DSA:3.20.70.20 13 127 1.1E-30 T 29-03-2018 CPU03_RS04355 1d034ecbce4a1377840bc31eb3948ca1 289 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 284 2.5E-105 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CPU03_RS04355 1d034ecbce4a1377840bc31eb3948ca1 289 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CPU03_RS04355 1d034ecbce4a1377840bc31eb3948ca1 289 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 283 20.712 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CPU03_RS04355 1d034ecbce4a1377840bc31eb3948ca1 289 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 12 278 3.1E-80 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 Gene3D G3DSA:1.10.10.10 334 425 9.4E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 Pfam PF04963 Sigma-54 factor, core binding domain 127 315 9.8E-62 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 Pfam PF04552 Sigma-54, DNA binding domain 329 487 1.0E-70 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 376 395 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 467 474 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 486 8.8E-162 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.1E-16 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 PRINTS PR00045 Sigma-54 factor signature 198 215 1.4E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 PRINTS PR00045 Sigma-54 factor signature 388 400 1.4E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 PRINTS PR00045 Sigma-54 factor signature 404 415 1.4E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 PRINTS PR00045 Sigma-54 factor signature 462 480 1.4E-31 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS05360 c425914577c658cfa3fc7678a3195423 489 PIRSF PIRSF000774 1 489 1.1E-153 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 Gene3D G3DSA:2.40.50.100 445 496 5.7E-4 T 29-03-2018 CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 Gene3D G3DSA:3.40.50.20 104 196 9.2E-7 T 29-03-2018 CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 1.8E-118 T 29-03-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 Gene3D G3DSA:3.40.50.720 257 444 4.1E-4 T 29-03-2018 CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 Pfam PF13478 XdhC Rossmann domain 106 247 7.5E-34 T 29-03-2018 IPR027051 XdhC Rossmann domain CPU03_RS09735 bce3a146eb9e29c33947f636b074f182 530 Pfam PF02625 XdhC and CoxI family 12 73 2.1E-16 T 29-03-2018 IPR003777 XdhC- CoxI CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 SUPERFAMILY SSF53686 33 355 4.06E-61 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 393 1.5E-192 T 29-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 392 2.4E-195 T 29-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 360 5.7E-53 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 Gene3D G3DSA:3.40.50.1100 76 185 6.8E-31 T 29-03-2018 CPU03_RS09715 9c6962f9be265235898480530c91af4c 399 Gene3D G3DSA:3.40.50.1100 186 386 1.4E-25 T 29-03-2018 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 Pfam PF03925 SeqA protein C-terminal domain 66 174 1.1E-48 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 Gene3D G3DSA:1.20.1380.10 70 172 3.1E-40 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 Pfam PF17206 SeqA protein N-terminal domain 1 35 3.7E-24 T 29-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 SUPERFAMILY SSF82808 61 176 4.45E-48 T 29-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 SUPERFAMILY SSF47598 1 34 9.34E-14 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 Gene3D G3DSA:1.10.1220.10 1 37 1.2E-24 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 PIRSF PIRSF019401 1 176 2.2E-49 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CPU03_RS12420 b64f77d541c23588a2977bfa7a912e13 176 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 176 43.915 T 29-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.118 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 3.8E-24 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Pfam PF01751 Toprim domain 414 523 1.2E-12 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 625 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 6.3E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Gene3D G3DSA:3.30.565.10 18 217 4.6E-64 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 3.3E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 7.0E-146 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 SUPERFAMILY SSF56719 389 622 8.11E-78 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 SUPERFAMILY SSF55874 6 216 2.05E-68 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Gene3D G3DSA:3.30.230.10 218 392 1.0E-40 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 SMART SM00387 28 174 6.6E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Gene3D G3DSA:3.40.50.670 397 628 4.4E-79 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 SMART SM00433 35 625 2.0E-213 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 Pfam PF00204 DNA gyrase B 219 385 3.3E-41 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06955 45b8f4e1aee424ab399f2e987484c58a 631 SUPERFAMILY SSF54211 218 383 7.02E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 SMART SM00382 49 165 4.3E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 4.6E-16 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Pfam PF16193 AAA C-terminal domain 189 267 8.3E-23 T 29-03-2018 IPR032423 AAA C-terminal domain CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 SUPERFAMILY SSF52540 6 236 6.05E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Gene3D G3DSA:3.40.50.300 2 153 1.2E-29 T 29-03-2018 CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Gene3D G3DSA:1.10.8.60 154 243 3.5E-18 T 29-03-2018 CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 1.8E-64 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Gene3D G3DSA:1.10.3710.10 348 447 4.1E-32 T 29-03-2018 CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 Gene3D G3DSA:1.20.272.10 252 346 6.2E-38 T 29-03-2018 CPU03_RS14145 89dd0f6bceba55869814b0b5eaae3f6c 447 SUPERFAMILY SSF48019 252 434 4.0E-71 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 Pfam PF12840 Helix-turn-helix domain 9 69 8.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 SMART SM00418 8 89 7.9E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.9E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.9E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.9E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 SUPERFAMILY SSF46785 3 93 2.46E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15670 4673607a2d44e66bb1425eebbc412f0a 126 Gene3D G3DSA:1.10.10.10 1 83 4.4E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12005 65f5442a4b2e54830da1bb411254deea 166 SUPERFAMILY SSF103247 46 153 1.44E-25 T 29-03-2018 IPR005180 Domain of unknown function DUF302 CPU03_RS12005 65f5442a4b2e54830da1bb411254deea 166 Gene3D G3DSA:3.30.310.70 36 166 9.2E-34 T 29-03-2018 IPR005180 Domain of unknown function DUF302 CPU03_RS12005 65f5442a4b2e54830da1bb411254deea 166 Pfam PF03625 Domain of unknown function DUF302 72 133 1.3E-16 T 29-03-2018 IPR005180 Domain of unknown function DUF302 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 Gene3D G3DSA:2.40.50.100 190 396 0.0027 T 29-03-2018 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 Pfam PF13437 HlyD family secretion protein 200 304 2.9E-5 T 29-03-2018 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 Gene3D G3DSA:2.40.50.100 88 160 2.0E-20 T 29-03-2018 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 SUPERFAMILY SSF111369 78 316 1.06E-55 T 29-03-2018 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 Pfam PF13533 Biotin-lipoyl like 89 137 3.8E-15 T 29-03-2018 CPU03_RS03010 0fd85e5e7e32504cabeab37bb00b149d 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 392 1.8E-78 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS16290 93897f2c4efc3b66b227b74369f5be5e 106 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 29 90 2.1E-15 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CPU03_RS16290 93897f2c4efc3b66b227b74369f5be5e 106 SUPERFAMILY SSF141488 24 99 1.44E-21 T 29-03-2018 IPR018660 C-type lysozyme inhibitor CPU03_RS05660 1bbe3fd5b50f91ab15411228b80009e6 96 Pfam PF04550 Phage holin family 2 1 86 2.5E-32 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin CPU03_RS05660 1bbe3fd5b50f91ab15411228b80009e6 96 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 84 1.0E-6 T 29-03-2018 IPR007633 Bacteriophage P2, GpY, holin CPU03_RS15930 92233bbe1548f66b9715fea0fa21c6de 256 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 25 109 1.7E-23 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS15930 92233bbe1548f66b9715fea0fa21c6de 256 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 15 114 2.0E-25 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS07515 3b69a7675d8dada931cacb7566260afb 93 SUPERFAMILY SSF54534 6 90 3.07E-27 T 29-03-2018 CPU03_RS07515 3b69a7675d8dada931cacb7566260afb 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 1.2E-20 T 29-03-2018 CPU03_RS07515 3b69a7675d8dada931cacb7566260afb 93 Gene3D G3DSA:3.10.50.40 2 93 8.1E-29 T 29-03-2018 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 Pfam PF02254 TrkA-N domain 404 515 1.6E-24 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 Gene3D G3DSA:3.40.50.720 399 562 1.3E-20 T 29-03-2018 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 Gene3D G3DSA:1.20.91.10 228 311 3.1E-10 T 29-03-2018 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 600 46.706 T 29-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 284 2.4E-84 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 SUPERFAMILY SSF51735 403 530 6.12E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09310 60167ed9b7485b7f4798b22b21d72d86 607 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 2.0E-64 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CPU03_RS11955 68e1145d84b371ac6f750f08bd1915e0 110 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 3 105 26.82 T 29-03-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 CPU03_RS11955 68e1145d84b371ac6f750f08bd1915e0 110 Pfam PF06411 HdeA/HdeB family 12 98 3.2E-23 T 29-03-2018 IPR010486 HNS-dependent expression A/B CPU03_RS11955 68e1145d84b371ac6f750f08bd1915e0 110 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 41 104 3.0E-15 T 29-03-2018 CPU03_RS11955 68e1145d84b371ac6f750f08bd1915e0 110 Gene3D G3DSA:1.10.890.10 29 102 2.5E-23 T 29-03-2018 CPU03_RS03475 9d01c1c5fc50f9d3b31380892b1f530c 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 1.1E-32 T 29-03-2018 IPR003849 Preprotein translocase YajC CPU03_RS03475 9d01c1c5fc50f9d3b31380892b1f530c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 1.5E-16 T 29-03-2018 IPR003849 Preprotein translocase YajC CPU03_RS03475 9d01c1c5fc50f9d3b31380892b1f530c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 1.5E-16 T 29-03-2018 IPR003849 Preprotein translocase YajC CPU03_RS03475 9d01c1c5fc50f9d3b31380892b1f530c 110 SMART SM01323 19 102 1.6E-35 T 29-03-2018 IPR003849 Preprotein translocase YajC CPU03_RS03475 9d01c1c5fc50f9d3b31380892b1f530c 110 Pfam PF02699 Preprotein translocase subunit 24 99 8.1E-26 T 29-03-2018 IPR003849 Preprotein translocase YajC CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 Gene3D G3DSA:1.10.3080.10 16 463 2.9E-104 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 Pfam PF00654 Voltage gated chloride channel 89 439 2.1E-90 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 PRINTS PR00762 Chloride channel signature 102 119 2.3E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 PRINTS PR00762 Chloride channel signature 407 426 2.3E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 PRINTS PR00762 Chloride channel signature 354 374 2.3E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 PRINTS PR00762 Chloride channel signature 389 405 2.3E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 PRINTS PR00762 Chloride channel signature 185 204 2.3E-28 T 29-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS11490 b12f473e1dbc0339b97629bf3ecb069b 474 SUPERFAMILY SSF81340 19 459 1.24E-110 T 29-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CPU03_RS00570 3cf7b4780a33832f16da0f0361557796 196 Gene3D G3DSA:3.40.50.10070 72 195 4.0E-11 T 29-03-2018 CPU03_RS00570 3cf7b4780a33832f16da0f0361557796 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 56 193 1.6E-31 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CPU03_RS00570 3cf7b4780a33832f16da0f0361557796 196 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 195 33.683 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CPU03_RS00570 3cf7b4780a33832f16da0f0361557796 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 194 5.9E-43 T 29-03-2018 IPR014094 Penicillin-binding protein activator LpoB CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 Pfam PF00467 KOW motif 130 162 8.7E-8 T 29-03-2018 IPR005824 KOW CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 SUPERFAMILY SSF82679 6 116 2.09E-40 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 Gene3D G3DSA:2.30.30.30 122 181 6.2E-22 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 Gene3D G3DSA:3.30.70.940 6 119 5.0E-42 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 SMART SM00738 6 115 8.9E-51 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.7E-71 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 SUPERFAMILY SSF50104 125 180 7.52E-20 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 SMART SM00739 127 154 1.2E-6 T 29-03-2018 IPR005824 KOW CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.1E-27 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.942 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CPU03_RS07090 bba56f4fa02c088de5fb887591396eef 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 Pfam PF00501 AMP-binding enzyme 9 359 6.9E-52 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 Gene3D G3DSA:2.30.38.10 283 355 5.7E-8 T 29-03-2018 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 447 1.3E-110 T 29-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 Gene3D G3DSA:3.40.50.980 6 147 3.3E-25 T 29-03-2018 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 Gene3D G3DSA:3.40.50.980 148 282 6.3E-25 T 29-03-2018 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 SUPERFAMILY SSF56801 8 454 4.97E-91 T 29-03-2018 CPU03_RS13445 7240669897e1340206edb51b669db2a0 463 Gene3D G3DSA:3.30.300.30 356 461 9.7E-17 T 29-03-2018 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 Gene3D G3DSA:3.40.50.300 17 417 3.0E-29 T 29-03-2018 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SMART SM00491 474 603 3.5E-50 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SUPERFAMILY SSF52540 14 108 5.02E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SUPERFAMILY SSF52540 185 242 5.02E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SUPERFAMILY SSF52540 562 600 5.02E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 Gene3D G3DSA:3.40.50.300 449 626 4.1E-10 T 29-03-2018 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 Pfam PF00270 DEAD/DEAH box helicase 29 92 2.4E-6 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SUPERFAMILY SSF52540 453 542 3.64E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SUPERFAMILY SSF52540 573 599 3.64E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 Pfam PF13307 Helicase C-terminal domain 459 616 5.2E-34 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CPU03_RS01340 8834b70ab7ae81968bb3a2d06474a84e 644 SMART SM00487 16 298 0.0023 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 Pfam PF01632 Ribosomal protein L35 2 60 4.1E-23 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.7E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.7E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.7E-22 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-26 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.995 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS16800 ed02f486202f37d98ba7bec738cbaa8f 65 SUPERFAMILY SSF143034 2 64 8.89E-23 T 29-03-2018 CPU03_RS07235 743248cdbbb0d8610c0ad53f75d8196f 201 Gene3D G3DSA:3.30.1050.10 6 124 1.3E-8 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS07235 743248cdbbb0d8610c0ad53f75d8196f 201 SUPERFAMILY SSF55718 18 112 1.65E-7 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS07235 743248cdbbb0d8610c0ad53f75d8196f 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 3.4E-19 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.081 T 29-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 2.3E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 SMART SM00421 836 893 3.2E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 Gene3D G3DSA:1.10.10.10 836 896 8.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 SUPERFAMILY SSF52540 12 230 1.63E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 SUPERFAMILY SSF48452 443 806 1.18E-152 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 Gene3D G3DSA:3.40.50.300 14 301 2.0E-7 T 29-03-2018 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 SUPERFAMILY SSF46894 829 895 8.5E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS09070 22360e94e9f20f37fe29b9f93752d4ca 904 Gene3D G3DSA:1.25.40.10 443 811 1.8E-42 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 977 1067 3.0E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 775 866 1.4E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 1078 1168 1.2E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 876 966 5.7E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 474 563 8.4E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 1280 1370 1.4E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 573 663 1.4E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 1381 1471 6.7E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 1179 1270 1.0E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00634 674 765 1.3E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 666 767 6.08E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 522 622 2.1E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 724 824 4.1E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 356 521 1.2E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 1229 1316 1.2E-20 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 623 723 1.7E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 1128 1228 9.4E-22 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 926 1025 1.0E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 1026 1127 4.3E-22 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.120.260 825 925 2.2E-21 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.40.10 1387 1476 1.7E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 780 871 8.63E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 780 866 5.2E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 1285 1372 1.3E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 679 765 1.3E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 982 1069 3.9E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 578 665 1.4E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 1083 1170 1.6E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 1386 1472 9.6E-15 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 477 563 1.0E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 881 968 2.2E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF02369 Bacterial Ig-like domain (group 1) 1184 1270 1.4E-14 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 982 1073 7.06E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 1376 1474 1.43E-20 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 1184 1275 1.08E-21 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 1083 1174 1.96E-21 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 1102 1176 2.3 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 597 671 4.5 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 698 772 8.9 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 1001 1075 4.9 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 799 873 13.0 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 1304 1378 7.6 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00089 900 974 4.9 T 29-03-2018 IPR022409 PKD/Chitinase domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.40.1120 1317 1386 1.8E-8 T 29-03-2018 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 PRINTS PR01369 Intimin signature 306 325 8.6E-12 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 PRINTS PR01369 Intimin signature 210 225 8.6E-12 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 PRINTS PR01369 Intimin signature 238 257 8.6E-12 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 PRINTS PR01369 Intimin signature 393 405 8.6E-12 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 1285 1376 9.81E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:3.10.100.10 1571 1683 5.7E-20 T 29-03-2018 IPR016186 C-type lectin-like/link domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 578 669 5.69E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Gene3D G3DSA:2.60.40.1080 1478 1569 1.9E-9 T 29-03-2018 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 477 568 1.22E-21 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 881 972 8.83E-22 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 Pfam PF11924 Inverse autotransporter, beta-domain 90 358 5.2E-101 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SUPERFAMILY SSF49373 1480 1562 5.02E-19 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 493 563 9.7 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 1301 1371 12.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 1402 1472 22.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 796 866 9.3 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 998 1068 14.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 594 664 23.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 1200 1270 19.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 1479 1565 0.93 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS01925 9ce3d01b00cd79c1a7d1d7c1e9e37a8f 1684 SMART SM00635 695 765 20.0 T 29-03-2018 IPR003343 Bacterial Ig-like, group 2 CPU03_RS06960 3bf634164e283f9a9cc53349729e69ea 193 SUPERFAMILY SSF53474 2 188 4.84E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06960 3bf634164e283f9a9cc53349729e69ea 193 Gene3D G3DSA:3.40.50.1820 1 190 1.7E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06960 3bf634164e283f9a9cc53349729e69ea 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.3E-69 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CPU03_RS03555 66dfad9d35b8d0ac6a9c9a39c341f4a3 455 PIRSF PIRSF006060 1 453 1.8E-72 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03555 66dfad9d35b8d0ac6a9c9a39c341f4a3 455 Pfam PF13520 Amino acid permease 39 411 6.4E-35 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 Gene3D G3DSA:1.10.3860.10 2 418 5.3E-127 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 2.9E-115 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 SUPERFAMILY SSF118215 8 412 3.92E-123 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 45.147 T 29-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06980 65146d2fd2252197405cdb999611bfc1 439 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.5E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 PIRSF PIRSF000414 1 529 6.0E-228 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.598 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Gene3D G3DSA:3.40.140.20 376 519 2.9E-52 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 SMART SM00851 19 132 1.9E-62 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Pfam PF02142 MGS-like domain 19 132 2.2E-30 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 SUPERFAMILY SSF52335 7 196 3.4E-72 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Gene3D G3DSA:3.40.50.1380 1 196 2.7E-77 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.8E-120 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 Gene3D G3DSA:3.40.140.20 225 375 5.4E-57 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 SUPERFAMILY SSF53927 221 529 2.51E-130 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 4.0E-261 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS07015 a11794396a9fc16eca08f8bd682c9d32 529 SMART SM00798 137 461 4.4E-213 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 Gene3D G3DSA:3.40.50.150 2 224 7.3E-40 T 29-03-2018 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 SUPERFAMILY SSF53335 3 208 8.85E-50 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 Pfam PF01555 DNA methylase 21 124 4.1E-9 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 Pfam PF01555 DNA methylase 141 199 2.3E-21 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 1.0E-21 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 1.0E-21 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 1.0E-21 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 1.0E-21 T 29-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CPU03_RS17285 dd725f1d8d5628c10d1ed827ca4ba6d1 226 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 Gene3D G3DSA:3.30.70.1560 115 198 3.5E-26 T 29-03-2018 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 Gene3D G3DSA:3.30.70.580 32 114 5.3E-14 T 29-03-2018 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 71 85 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 SUPERFAMILY SSF55120 35 213 3.52E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 40 211 1.7E-57 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS14800 889f1e78248aa95318b61d591e013be9 213 Pfam PF00849 RNA pseudouridylate synthase 36 181 3.0E-13 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS04065 ae77843ae6936da14487c41f566c054e 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 24.85 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CPU03_RS04065 ae77843ae6936da14487c41f566c054e 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.2E-34 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CPU03_RS04065 ae77843ae6936da14487c41f566c054e 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 2.0E-22 T 29-03-2018 IPR009624 Uncharacterised protein family UPF0253 CPU03_RS15000 030b99941d0b649e4a6a505515d7e431 344 Gene3D G3DSA:3.40.50.1980 34 163 1.1E-11 T 29-03-2018 CPU03_RS15000 030b99941d0b649e4a6a505515d7e431 344 Gene3D G3DSA:3.40.50.1980 166 341 6.1E-23 T 29-03-2018 CPU03_RS15000 030b99941d0b649e4a6a505515d7e431 344 SUPERFAMILY SSF53807 44 308 2.04E-35 T 29-03-2018 CPU03_RS15000 030b99941d0b649e4a6a505515d7e431 344 Pfam PF01497 Periplasmic binding protein 46 279 5.3E-17 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 SUPERFAMILY SSF48008 117 248 2.38E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 1 254 59.01 T 29-03-2018 IPR023730 HTH-type transcriptional repressor NanR CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 SMART SM00345 33 92 2.3E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 92 9.6E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 Gene3D G3DSA:1.10.10.10 23 100 6.1E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 SMART SM00895 120 244 2.5E-14 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 Gene3D G3DSA:1.20.120.530 113 259 1.3E-22 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 5.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 5.5E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 Pfam PF07729 FCD domain 122 243 7.8E-20 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS15295 234f8a5694374fcc7b5c2dadffd89dbf 260 SUPERFAMILY SSF46785 26 96 5.81E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 Pfam PF00672 HAMP domain 181 230 1.9E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 Gene3D G3DSA:3.30.565.10 280 454 2.1E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 Gene3D G3DSA:1.10.287.130 224 279 2.1E-12 T 29-03-2018 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SMART SM00387 343 455 6.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.6E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.6E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.6E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SUPERFAMILY SSF158472 182 230 1.1E-10 T 29-03-2018 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SMART SM00388 234 298 2.8E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 4.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SMART SM00304 181 233 7.9E-15 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 454 2.3E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SUPERFAMILY SSF55874 287 453 1.96E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03025 c5ef279f522360948c90166cc4687364 457 SUPERFAMILY SSF47384 217 298 4.9E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.364 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.5E-127 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 SUPERFAMILY SSF52374 340 471 3.94E-22 T 29-03-2018 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 Pfam PF00294 pfkB family carbohydrate kinase 11 305 1.4E-49 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 SUPERFAMILY SSF53613 12 310 2.81E-58 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 7.4E-17 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 Gene3D G3DSA:3.40.1190.20 2 310 4.3E-57 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 Pfam PF01467 Cytidylyltransferase-like 345 468 4.4E-16 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 333 472 8.2E-62 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CPU03_RS05505 aceabec6d4e4c2e9d126b9ecc38cacea 477 Gene3D G3DSA:3.40.50.620 318 476 3.7E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04420 89fed5cb422af30b1243b2bcb7b0d86e 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.2E-44 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CPU03_RS04420 89fed5cb422af30b1243b2bcb7b0d86e 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.9E-36 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CPU03_RS04420 89fed5cb422af30b1243b2bcb7b0d86e 170 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CPU03_RS04420 89fed5cb422af30b1243b2bcb7b0d86e 170 SUPERFAMILY SSF55083 1 153 2.49E-53 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CPU03_RS04420 89fed5cb422af30b1243b2bcb7b0d86e 170 Gene3D G3DSA:3.30.70.560 1 168 1.8E-56 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CPU03_RS00450 7bbb11c1be1348668a93daf75a265954 221 Pfam PF04012 PspA/IM30 family 2 216 1.1E-46 T 29-03-2018 IPR007157 PspA/IM30 CPU03_RS00450 7bbb11c1be1348668a93daf75a265954 221 Gene3D G3DSA:1.20.1170.10 4 220 2.8E-6 T 29-03-2018 CPU03_RS00450 7bbb11c1be1348668a93daf75a265954 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 3.5E-92 T 29-03-2018 IPR014319 Phage shock protein, PspA CPU03_RS07830 7119e48fc7ec6ed757048fbb952ecd4d 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 4.8E-104 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CPU03_RS07830 7119e48fc7ec6ed757048fbb952ecd4d 296 SUPERFAMILY SSF51730 22 294 2.94E-96 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CPU03_RS07830 7119e48fc7ec6ed757048fbb952ecd4d 296 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 3.1E-106 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CPU03_RS07830 7119e48fc7ec6ed757048fbb952ecd4d 296 Gene3D G3DSA:3.20.20.220 1 296 3.3E-100 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 SUPERFAMILY SSF52540 1 219 4.91E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 Pfam PF00005 ABC transporter 19 157 1.7E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 Gene3D G3DSA:3.40.50.300 1 225 3.1E-58 T 29-03-2018 CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 SMART SM00382 24 207 1.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS04785 8e337230ead6fc2788a3dfcf9b6770b3 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 2.1E-97 T 29-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01182 Ornithine decarboxylase signature 89 113 1.7E-7 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01182 Ornithine decarboxylase signature 46 73 1.7E-7 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01182 Ornithine decarboxylase signature 354 367 1.7E-7 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 Gene3D G3DSA:3.20.20.10 27 264 6.8E-50 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 6.3E-7 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 6.3E-7 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 180 193 6.3E-7 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 6.3E-7 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 SUPERFAMILY SSF50621 242 388 5.02E-35 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 SUPERFAMILY SSF51419 25 278 1.45E-58 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 Gene3D G3DSA:2.40.37.10 265 390 1.3E-30 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 28 275 1.5E-26 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CPU03_RS15120 4f41b0345da142797b108a7df90ca37b 390 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 141 367 1.1E-14 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 9.3E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 SUPERFAMILY SSF50249 3 70 4.68E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 SMART SM00357 6 70 9.3E-32 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 PRINTS PR00050 Cold shock protein signature 43 61 1.1E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 PRINTS PR00050 Cold shock protein signature 7 22 1.1E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 PRINTS PR00050 Cold shock protein signature 28 37 1.1E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 Gene3D G3DSA:2.40.50.140 4 70 6.0E-30 T 29-03-2018 CPU03_RS01940 14a7557c841fd713e6fad8ce2b8ca0b9 71 PIRSF PIRSF002599 1 71 1.2E-25 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 PIRSF PIRSF002808 6 448 7.1E-145 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.0E-143 T 29-03-2018 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 Gene3D G3DSA:1.20.1250.20 237 437 4.0E-27 T 29-03-2018 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 SUPERFAMILY SSF103473 17 433 6.28E-83 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 Gene3D G3DSA:1.20.1250.20 19 213 5.5E-34 T 29-03-2018 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CPU03_RS08620 25f50de7faac92ba933cd08d4e95f935 448 Pfam PF07690 Major Facilitator Superfamily 37 396 1.1E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 1.3E-197 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 Pfam PF01228 Glycine radical 646 747 2.5E-26 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 Gene3D G3DSA:3.20.70.20 1 765 2.2E-268 T 29-03-2018 CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS14885 9264b24ae1309431464d9887757b53cd 765 SUPERFAMILY SSF51998 1 764 1.28E-213 T 29-03-2018 CPU03_RS02275 e2b7821e517e7ca2d8f90ffc8be91791 541 SUPERFAMILY SSF53649 267 528 5.42E-22 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS02275 e2b7821e517e7ca2d8f90ffc8be91791 541 Pfam PF08019 Domain of unknown function (DUF1705) 55 207 1.3E-46 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CPU03_RS02275 e2b7821e517e7ca2d8f90ffc8be91791 541 Pfam PF00884 Sulfatase 234 523 7.5E-47 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS02275 e2b7821e517e7ca2d8f90ffc8be91791 541 Gene3D G3DSA:3.40.720.10 244 537 5.3E-23 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS16750 5ee4022fac8db97f01e1c6a24b3d3ac7 464 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 421 6.7E-39 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CPU03_RS16750 5ee4022fac8db97f01e1c6a24b3d3ac7 464 PIRSF PIRSF002744 1 464 7.8E-91 T 29-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 Gene3D G3DSA:1.10.10.60 248 297 8.0E-15 T 29-03-2018 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 Gene3D G3DSA:2.60.120.280 22 179 8.0E-15 T 29-03-2018 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 Pfam PF02311 AraC-like ligand binding domain 41 127 2.3E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 SUPERFAMILY SSF51182 41 114 1.45E-9 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 Gene3D G3DSA:1.10.10.60 190 247 1.4E-7 T 29-03-2018 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 2.6E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 SMART SM00342 209 292 7.4E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 SUPERFAMILY SSF46689 247 294 2.78E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 Pfam PF12833 Helix-turn-helix domain 215 294 1.9E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS15400 43953ad5c05b4981d6cd3a9ae96bd12e 300 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 7 294 1.1E-108 T 29-03-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF00013 KH domain 556 614 8.4E-9 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF54211 293 488 1.97E-46 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF54211 6 144 3.64E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF55666 145 235 7.72E-31 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Gene3D G3DSA:3.30.1370.10 555 624 1.4E-13 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF46915 238 320 3.4E-19 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 1.3E-23 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF00575 S1 RNA binding domain 619 690 4.0E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Gene3D G3DSA:3.30.230.70 13 251 1.7E-53 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Gene3D G3DSA:3.30.230.70 317 544 3.3E-59 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF54791 554 622 2.15E-17 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 2.7E-6 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.3E-15 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 PIRSF PIRSF005499 2 707 9.5E-304 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 1.0E-18 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 3.9E-23 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SMART SM00316 620 690 4.8E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SMART SM00322 552 617 3.5E-12 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF55666 450 548 9.54E-28 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Gene3D G3DSA:1.10.10.400 252 316 4.0E-19 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Gene3D G3DSA:2.40.50.140 625 698 3.5E-26 T 29-03-2018 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.657 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 SUPERFAMILY SSF50249 608 692 2.91E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS05995 8bdd889fb11631eda0f3c825ca4d1ba3 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 SUPERFAMILY SSF52540 13 574 1.95E-211 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 576 41.402 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 Pfam PF01268 Formate--tetrahydrofolate ligase 13 575 3.2E-234 T 29-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 Gene3D G3DSA:3.10.410.10 465 552 1.1E-30 T 29-03-2018 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 Gene3D G3DSA:3.40.50.300 14 250 2.3E-86 T 29-03-2018 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 Gene3D G3DSA:3.40.50.300 251 463 3.5E-64 T 29-03-2018 CPU03_RS16360 1ab1e3f3632261822cbfb475d6f4e3cd 576 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 341 352 - T 29-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CPU03_RS03360 0e4c2f4628f936d773b503c7833d6107 192 Gene3D G3DSA:3.40.50.10610 69 185 0.008 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CPU03_RS03360 0e4c2f4628f936d773b503c7833d6107 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 8.6E-52 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 SUPERFAMILY SSF53901 1 251 4.98E-63 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 5.6E-41 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 Gene3D G3DSA:3.40.47.10 4 257 2.7E-55 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 3.1E-31 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 Gene3D G3DSA:3.40.47.10 260 403 2.8E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 SUPERFAMILY SSF53901 213 401 1.23E-61 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CPU03_RS13110 89e93137c841f8e8d695d56d3a48cbce 403 SMART SM00825 Beta-ketoacyl synthase 4 402 3.3E-12 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CPU03_RS12575 d5dfa2c5ffb4844365697468a5b82ca1 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 1.8E-41 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CPU03_RS12575 d5dfa2c5ffb4844365697468a5b82ca1 227 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.3E-93 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 Pfam PF03825 Nucleoside H+ symporter 1 405 1.7E-173 T 29-03-2018 CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 Gene3D G3DSA:1.20.1250.20 198 415 1.3E-19 T 29-03-2018 CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 SUPERFAMILY SSF103473 9 409 3.14E-31 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 44.418 T 29-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 Gene3D G3DSA:1.20.1250.20 5 194 7.4E-7 T 29-03-2018 CPU03_RS10400 949e2cf47218d112c85ca63f025bd379 420 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 408 4.9E-205 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 SUPERFAMILY SSF52490 12 207 1.96E-70 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 Gene3D G3DSA:3.40.50.1440 8 213 2.1E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 5.0E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 SMART SM00864 12 204 1.9E-112 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 Gene3D G3DSA:3.30.1330.20 214 324 2.0E-44 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 344 38.338 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 333 9.2E-142 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.4E-37 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 SUPERFAMILY SSF55307 203 319 9.84E-43 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 PRINTS PR00423 Cell division protein FtsZ signature 188 210 8.0E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 PRINTS PR00423 Cell division protein FtsZ signature 211 232 8.0E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 PRINTS PR00423 Cell division protein FtsZ signature 97 117 8.0E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 PRINTS PR00423 Cell division protein FtsZ signature 125 146 8.0E-52 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CPU03_RS04645 1ef0873e516e53785e77b89bc96e9bf7 386 SMART SM00865 206 324 6.4E-55 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 29-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 Pfam PF03061 Thioesterase superfamily 20 103 1.5E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 5.3E-49 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 Gene3D G3DSA:3.10.129.10 2 134 3.0E-35 T 29-03-2018 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 PIRSF PIRSF003230 1 134 4.7E-45 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 SUPERFAMILY SSF54637 3 133 9.92E-40 T 29-03-2018 IPR029069 HotDog domain CPU03_RS12570 3f22116c18418cf91aec61e82d6e30ef 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 4.6E-42 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 Gene3D G3DSA:2.20.150.10 12 46 9.7E-12 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 2.9E-101 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 SUPERFAMILY SSF53613 7 291 1.87E-66 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 Gene3D G3DSA:3.40.1190.20 47 311 9.9E-50 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 PIRSF PIRSF000535 2 311 2.3E-114 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 1.4E-99 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CPU03_RS13700 1d1049361a68a32423da509aeb7bbb1b 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 7.2E-64 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS03450 ae89f0d6a22c1bbf8a6176e97877a2d7 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 7.8E-58 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS03450 ae89f0d6a22c1bbf8a6176e97877a2d7 156 SUPERFAMILY SSF52121 3 154 8.11E-59 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS03450 ae89f0d6a22c1bbf8a6176e97877a2d7 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.4E-55 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS03450 ae89f0d6a22c1bbf8a6176e97877a2d7 156 Gene3D G3DSA:3.40.50.960 1 155 1.6E-62 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS03450 ae89f0d6a22c1bbf8a6176e97877a2d7 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.634 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS15515 3d155a2e0cd76ee8fd1ae2d50c6ba2dd 350 SUPERFAMILY SSF53807 24 324 5.1E-56 T 29-03-2018 CPU03_RS15515 3d155a2e0cd76ee8fd1ae2d50c6ba2dd 350 Gene3D G3DSA:3.40.50.1980 188 348 3.7E-42 T 29-03-2018 CPU03_RS15515 3d155a2e0cd76ee8fd1ae2d50c6ba2dd 350 Gene3D G3DSA:3.40.50.1980 22 180 5.6E-26 T 29-03-2018 CPU03_RS15515 3d155a2e0cd76ee8fd1ae2d50c6ba2dd 350 Pfam PF01497 Periplasmic binding protein 43 296 1.0E-31 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CPU03_RS14330 caa17991456f3e2ebc868ad368a95633 261 Gene3D G3DSA:3.40.50.150 8 260 2.3E-53 T 29-03-2018 CPU03_RS14330 caa17991456f3e2ebc868ad368a95633 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 43.179 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 CPU03_RS14330 caa17991456f3e2ebc868ad368a95633 261 SUPERFAMILY SSF53335 4 254 6.91E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS14330 caa17991456f3e2ebc868ad368a95633 261 Pfam PF13847 Methyltransferase domain 44 147 6.4E-17 T 29-03-2018 IPR025714 Methyltransferase domain CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 SUPERFAMILY SSF53067 208 276 1.25E-28 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 SUPERFAMILY SSF53067 328 447 1.25E-28 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 SUPERFAMILY SSF53067 85 205 1.13E-25 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 SUPERFAMILY SSF53067 1 44 1.13E-25 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 Pfam PF00012 Hsp70 protein 130 228 1.0E-10 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 Gene3D G3DSA:3.30.420.40 1 216 3.9E-33 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 Gene3D G3DSA:3.30.420.40 217 428 1.8E-27 T 29-03-2018 CPU03_RS03545 c4aa93b7280bdd116fef18cdf38df195 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS11470 62bae83bc4ab867047acbace6d9a3f96 316 Gene3D G3DSA:3.40.50.10140 90 284 2.6E-10 T 29-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CPU03_RS11470 62bae83bc4ab867047acbace6d9a3f96 316 Pfam PF13676 TIR domain 97 200 1.9E-8 T 29-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CPU03_RS11470 62bae83bc4ab867047acbace6d9a3f96 316 SUPERFAMILY SSF52200 94 185 3.27E-5 T 29-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CPU03_RS03860 95c8f327b7395e4b0f33b9f909c0ed27 88 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 25 75 1.8E-22 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CPU03_RS03860 95c8f327b7395e4b0f33b9f909c0ed27 88 Gene3D G3DSA:1.10.10.10 30 86 1.7E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.5E-159 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 Pfam PF00953 Glycosyl transferase family 4 99 284 6.2E-36 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04685 8f4ba5008d916b196edb749b20b9b2a7 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.874 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 SUPERFAMILY SSF56059 123 312 1.55E-59 T 29-03-2018 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.3E-78 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 179.7 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Gene3D G3DSA:3.40.50.20 2 129 3.0E-52 T 29-03-2018 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.0E-138 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.2E-47 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Gene3D G3DSA:3.30.470.20 191 300 5.3E-17 T 29-03-2018 CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 SUPERFAMILY SSF52440 2 122 6.04E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS06595 fa96ccd0cf10f4a716de984003274e25 316 Gene3D G3DSA:3.30.1490.20 138 190 3.5E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 SUPERFAMILY SSF52540 3 431 1.02E-178 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 Gene3D G3DSA:3.90.170.10 267 432 2.3E-66 T 29-03-2018 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 1.0E-176 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 Gene3D G3DSA:3.40.440.10 152 266 1.2E-25 T 29-03-2018 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 Gene3D G3DSA:3.40.440.10 1 151 4.1E-53 T 29-03-2018 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 SMART SM00788 4 425 1.5E-295 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 9.9E-200 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.36 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS06265 1a405ab3a7c1f34578de332a2dba8d55 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CPU03_RS15040 f8d960eef74b2ee51b93d34d4f247abf 201 Gene3D G3DSA:3.30.950.10 112 201 2.0E-22 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15040 f8d960eef74b2ee51b93d34d4f247abf 201 Gene3D G3DSA:3.40.1010.10 1 111 2.1E-22 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15040 f8d960eef74b2ee51b93d34d4f247abf 201 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 1.9E-59 T 29-03-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CPU03_RS15040 f8d960eef74b2ee51b93d34d4f247abf 201 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 179 2.5E-28 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15040 f8d960eef74b2ee51b93d34d4f247abf 201 SUPERFAMILY SSF53790 1 199 1.01E-42 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 233 2.3E-41 T 29-03-2018 CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.6E-18 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 Gene3D G3DSA:3.40.50.720 1 236 3.1E-46 T 29-03-2018 CPU03_RS13200 d895bab8e5fae8cb8ffef24c8606839e 237 SUPERFAMILY SSF51735 8 233 1.98E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01255 f7261ec35c8d7b2b8ec10abf586302d5 71 Pfam PF13993 YccJ-like protein 5 71 1.3E-39 T 29-03-2018 IPR025600 YccJ-like protein CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 5.4E-120 T 29-03-2018 IPR017698 Probable selenate reductase, FAD-binding subunit CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 153 2.9E-21 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 Gene3D G3DSA:3.30.390.50 159 259 4.9E-14 T 29-03-2018 CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 SMART SM01092 161 251 2.4E-11 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 SUPERFAMILY SSF55447 164 252 3.27E-13 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 Gene3D G3DSA:3.30.465.10 54 155 3.7E-14 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 Gene3D G3DSA:3.30.43.10 3 46 0.002 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CPU03_RS09760 1485676dfb536b8027e5cf03d3a1432a 259 SUPERFAMILY SSF56176 4 154 3.98E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS03630 fe3b2766a4bde9b48487b763c175b038 348 Gene3D G3DSA:3.40.50.1110 21 304 1.2E-30 T 29-03-2018 CPU03_RS03630 fe3b2766a4bde9b48487b763c175b038 348 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 27 221 2.4E-9 T 29-03-2018 IPR005181 Sialate O-acetylesterase domain CPU03_RS03630 fe3b2766a4bde9b48487b763c175b038 348 SUPERFAMILY SSF52266 23 285 3.3E-34 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CPU03_RS03630 fe3b2766a4bde9b48487b763c175b038 348 SUPERFAMILY SSF52266 313 338 3.3E-34 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 SMART SM00480 17 362 4.1E-170 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 SUPERFAMILY SSF55979 1 121 3.61E-27 T 29-03-2018 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Gene3D G3DSA:3.10.150.10 248 366 2.8E-26 T 29-03-2018 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Gene3D G3DSA:3.10.150.10 1 120 1.3E-28 T 29-03-2018 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 PIRSF PIRSF000804 1 366 1.0E-117 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 7.8E-40 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 SUPERFAMILY SSF55979 125 244 8.16E-30 T 29-03-2018 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Gene3D G3DSA:3.10.150.10 124 247 1.1E-33 T 29-03-2018 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.0E-113 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.6E-43 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 4.3E-40 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS08210 30faf4f8b0111cc5eee41604c9571dd8 366 SUPERFAMILY SSF55979 245 366 7.18E-38 T 29-03-2018 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 SMART SM00850 146 244 4.1E-36 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 Gene3D G3DSA:2.40.50.40 140 206 1.1E-16 T 29-03-2018 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 Gene3D G3DSA:2.20.25.10 207 244 6.2E-14 T 29-03-2018 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 Pfam PF04397 LytTr DNA-binding domain 147 243 7.9E-30 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 SUPERFAMILY SSF52172 1 125 1.37E-23 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 SMART SM00448 2 116 7.7E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS10300 1b6b673c0b1507c5c86e876d1afd5119 245 Gene3D G3DSA:3.40.50.2300 1 139 3.9E-22 T 29-03-2018 CPU03_RS05430 03125109663443e13ab55ae0e99b0c3b 425 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.3E-22 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CPU03_RS05430 03125109663443e13ab55ae0e99b0c3b 425 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 422 1.8E-150 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CPU03_RS05430 03125109663443e13ab55ae0e99b0c3b 425 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 3.8E-75 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CPU03_RS05430 03125109663443e13ab55ae0e99b0c3b 425 Pfam PF07670 Nucleoside recognition 99 195 1.5E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 Pfam PF00582 Universal stress protein family 1 143 1.4E-19 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 SUPERFAMILY SSF52402 1 143 1.0E-22 T 29-03-2018 CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 Gene3D G3DSA:3.40.50.620 1 143 1.6E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 PRINTS PR01438 Universal stress protein signature 121 143 1.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 PRINTS PR01438 Universal stress protein signature 104 116 1.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS01285 ec214fb23b64e0f97b3735d5ea87b595 143 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-11 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SUPERFAMILY SSF50447 271 411 3.09E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SUPERFAMILY SSF52540 6 288 3.48E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Gene3D G3DSA:3.30.70.240 618 695 2.5E-31 T 29-03-2018 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 111.691 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Pfam PF03764 Elongation factor G, domain IV 486 607 2.8E-46 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SMART SM00889 487 607 9.2E-72 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.2E-16 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SUPERFAMILY SSF54211 486 608 1.49E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Gene3D G3DSA:2.40.30.10 294 406 1.0E-29 T 29-03-2018 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.1E-67 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.4E-31 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SUPERFAMILY SSF54980 409 487 1.19E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SMART SM00838 609 696 1.1E-59 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.9E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Gene3D G3DSA:3.30.230.10 501 617 3.8E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Gene3D G3DSA:3.30.70.870 407 500 4.8E-39 T 29-03-2018 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Gene3D G3DSA:3.40.50.300 1 293 4.3E-56 T 29-03-2018 CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 SUPERFAMILY SSF54980 612 698 1.12E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS09365 a67ce8cb61556f11a458239ae489aeb2 702 Pfam PF14492 Elongation Factor G, domain II 411 485 6.0E-35 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 Gene3D G3DSA:3.40.50.300 968 1212 1.5E-15 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 Gene3D G3DSA:3.40.50.300 1 245 7.2E-27 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 Pfam PF13476 AAA domain 5 247 1.1E-16 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 SUPERFAMILY SSF52540 1 260 7.64E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 Gene3D G3DSA:1.20.120.330 518 686 3.1E-8 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1107 1182 8.3E-16 T 29-03-2018 CPU03_RS02975 db7342cfa1cb285de7c014ecb1383a04 1233 SUPERFAMILY SSF52540 1062 1198 4.28E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.4E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 1.1E-41 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 1.2E-17 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Gene3D G3DSA:3.50.50.60 227 336 6.0E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 SUPERFAMILY SSF55424 348 466 4.81E-26 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 8.1E-19 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 8.1E-19 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 8.1E-19 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.1E-19 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 8.1E-19 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 PIRSF PIRSF000350 1 467 2.3E-55 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Gene3D G3DSA:3.30.390.30 349 471 5.9E-25 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Gene3D G3DSA:1.10.287.990 37 106 8.3E-16 T 29-03-2018 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 Gene3D G3DSA:3.50.50.60 115 226 1.1E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 SUPERFAMILY SSF51905 114 191 7.48E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 SUPERFAMILY SSF51905 1 56 7.48E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS07795 d16beb69cfbc90b5e31b60de36eac49a 482 SUPERFAMILY SSF51905 220 365 7.48E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 Pfam PF01430 Hsp33 protein 5 273 4.8E-84 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 SUPERFAMILY SSF118352 224 282 5.62E-19 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 PIRSF PIRSF005261 1 283 3.8E-73 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 Gene3D G3DSA:3.90.1280.10 226 281 2.0E-21 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 Gene3D G3DSA:1.10.287.480 181 225 1.6E-17 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 SUPERFAMILY SSF64397 4 232 2.75E-75 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 Gene3D G3DSA:3.55.30.10 1 176 7.3E-64 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CPU03_RS09180 02530feaa9eaae7b2e68b2cf45017cae 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 31.919 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 2.8E-23 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 372 5.5E-23 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Gene3D G3DSA:3.40.50.300 264 389 2.2E-15 T 29-03-2018 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 3.5E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-9 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.0E-9 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Gene3D G3DSA:3.30.300.20 390 465 1.0E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Hamap MF_00195 GTPase Der [der]. 2 467 39.312 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Gene3D G3DSA:1.20.120.430 2 67 1.4E-15 T 29-03-2018 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Gene3D G3DSA:1.20.120.430 68 263 7.4E-46 T 29-03-2018 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 SUPERFAMILY SSF52540 137 167 4.58E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 SUPERFAMILY SSF52540 206 470 4.58E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 PIRSF PIRSF006485 1 472 1.1E-179 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 384 464 1.2E-26 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 SUPERFAMILY SSF52540 4 168 1.15E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Pfam PF01926 50S ribosome-binding GTPase 210 328 7.6E-25 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11375 8168d14604b03ad6f13bc3e843a81707 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.2E-27 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 SUPERFAMILY SSF50346 105 181 2.16E-19 T 29-03-2018 IPR011033 PRC-barrel-like CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 Pfam PF05239 PRC-barrel domain 103 176 9.7E-9 T 29-03-2018 IPR027275 PRC-barrel domain CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 Gene3D G3DSA:2.30.30.240 101 176 7.9E-23 T 29-03-2018 CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 SUPERFAMILY SSF50447 12 98 2.05E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 12 181 24.925 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 13 181 1.5E-59 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 Gene3D G3DSA:2.40.30.60 11 99 9.0E-28 T 29-03-2018 IPR002676 RimM protein GO:0006364 CPU03_RS11110 dbf79a10a83692d13a91b84e8eb5dd80 181 Pfam PF01782 RimM N-terminal domain 15 96 5.1E-27 T 29-03-2018 IPR002676 RimM protein GO:0006364 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 Pfam PF01595 Domain of unknown function DUF21 6 197 3.4E-38 T 29-03-2018 IPR002550 Domain of unknown function DUF21 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 SMART SM00116 221 270 4.2 T 29-03-2018 IPR000644 CBS domain CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 SMART SM00116 285 333 5.4 T 29-03-2018 IPR000644 CBS domain CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 Gene3D G3DSA:3.30.465.10 346 437 1.1E-22 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 SUPERFAMILY SSF54631 199 335 1.34E-21 T 29-03-2018 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 Gene3D G3DSA:3.10.580.10 193 345 1.4E-21 T 29-03-2018 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 SMART SM01091 346 426 2.3E-27 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 SUPERFAMILY SSF56176 344 430 7.91E-23 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 Pfam PF00571 CBS domain 283 333 2.8E-4 T 29-03-2018 IPR000644 CBS domain CPU03_RS06170 01b0d52ad3bc7490e3fbd55ccde0cd59 449 Pfam PF03471 Transporter associated domain 348 425 1.6E-21 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS02740 0794cb12a3b2fc80d0ef8c61b7787fa9 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 58 274 1.2E-48 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS02740 0794cb12a3b2fc80d0ef8c61b7787fa9 289 Gene3D G3DSA:3.40.630.40 43 278 1.0E-54 T 29-03-2018 CPU03_RS02740 0794cb12a3b2fc80d0ef8c61b7787fa9 289 SUPERFAMILY SSF53187 56 152 9.42E-53 T 29-03-2018 CPU03_RS02740 0794cb12a3b2fc80d0ef8c61b7787fa9 289 SUPERFAMILY SSF53187 201 277 9.42E-53 T 29-03-2018 CPU03_RS02740 0794cb12a3b2fc80d0ef8c61b7787fa9 289 SMART SM00646 118 274 2.5E-55 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Gene3D G3DSA:2.40.50.140 131 186 2.4E-27 T 29-03-2018 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 SUPERFAMILY SSF50249 69 128 1.03E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.509 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 SUPERFAMILY SSF50249 130 187 1.52E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 SUPERFAMILY SSF50104 2 63 7.82E-19 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 PIRSF PIRSF005901 2 188 6.0E-66 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 SMART SM01185 69 123 2.1E-26 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Gene3D G3DSA:2.40.50.140 67 129 1.8E-24 T 29-03-2018 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.8E-24 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 SMART SM00841 131 186 3.8E-32 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.6E-22 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Gene3D G3DSA:2.30.30.30 4 63 1.2E-24 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 6.8E-77 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 29-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CPU03_RS06395 0a664535b62308dc31a363a1407d337e 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.7E-26 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 SUPERFAMILY SSF51283 2 151 6.8E-55 T 29-03-2018 IPR029054 dUTPase-like CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 Gene3D G3DSA:2.70.40.10 1 116 3.8E-40 T 29-03-2018 CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 Pfam PF00692 dUTPase 17 150 2.0E-42 T 29-03-2018 IPR029054 dUTPase-like CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 151 5.6E-48 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 Gene3D G3DSA:2.70.40.10 117 151 2.0E-14 T 29-03-2018 CPU03_RS07675 f5f837cff54f57e9e3e6011e97a8c283 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.265 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CPU03_RS06145 58b53e687cc988d2500676ebd3031968 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CPU03_RS06145 58b53e687cc988d2500676ebd3031968 176 Gene3D G3DSA:3.90.80.10 3 176 1.4E-53 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CPU03_RS06145 58b53e687cc988d2500676ebd3031968 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.5E-55 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CPU03_RS06145 58b53e687cc988d2500676ebd3031968 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.373 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CPU03_RS06145 58b53e687cc988d2500676ebd3031968 176 SUPERFAMILY SSF50324 4 174 1.57E-67 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CPU03_RS10655 3d63f249fe43507c2a021a9b0c35433f 140 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 136 1.0E-22 T 29-03-2018 IPR009883 Inner membrane protein YgfX CPU03_RS10655 3d63f249fe43507c2a021a9b0c35433f 140 PIRSF PIRSF020653 1 140 1.6E-45 T 29-03-2018 IPR009883 Inner membrane protein YgfX CPU03_RS10655 3d63f249fe43507c2a021a9b0c35433f 140 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 133 7.1E-49 T 29-03-2018 IPR009883 Inner membrane protein YgfX CPU03_RS07930 0057f5c654f68335c4614dd91033fb28 328 SUPERFAMILY SSF56112 6 326 6.12E-87 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS07930 0057f5c654f68335c4614dd91033fb28 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.688 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CPU03_RS07930 0057f5c654f68335c4614dd91033fb28 328 Gene3D G3DSA:3.30.200.20 5 107 1.1E-18 T 29-03-2018 CPU03_RS07930 0057f5c654f68335c4614dd91033fb28 328 Gene3D G3DSA:3.90.1200.10 111 323 4.0E-19 T 29-03-2018 CPU03_RS07930 0057f5c654f68335c4614dd91033fb28 328 Pfam PF01636 Phosphotransferase enzyme family 33 256 1.5E-40 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 2.9E-75 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 Gene3D G3DSA:2.40.37.10 21 105 1.8E-11 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 Gene3D G3DSA:2.40.37.10 423 604 7.2E-61 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PIRSF PIRSF001336 14 658 2.0E-248 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 Gene3D G3DSA:3.20.20.10 106 367 3.2E-41 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 9.7E-264 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 1.5E-67 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 SUPERFAMILY SSF50621 482 594 1.08E-8 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 SUPERFAMILY SSF51419 92 369 4.58E-68 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 4.3E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 4.3E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 4.3E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 4.3E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 4.3E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10510 b6f9c9437467a40e648dab3de8c51019 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 27 657 42.025 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CPU03_RS02510 6992265b71cdf227df8c8d4b2d3cdec8 473 Pfam PF00929 Exonuclease 10 189 1.3E-26 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CPU03_RS02510 6992265b71cdf227df8c8d4b2d3cdec8 473 PIRSF PIRSF000977 1 473 2.0E-202 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CPU03_RS02510 6992265b71cdf227df8c8d4b2d3cdec8 473 Pfam PF08411 Exonuclease C-terminal 209 469 4.0E-105 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CPU03_RS02510 6992265b71cdf227df8c8d4b2d3cdec8 473 SUPERFAMILY SSF53098 7 471 2.74E-135 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS02510 6992265b71cdf227df8c8d4b2d3cdec8 473 Gene3D G3DSA:3.30.420.10 2 198 4.2E-28 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 Gene3D G3DSA:1.20.58.110 1 87 1.7E-29 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 6.1E-33 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-32 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.474 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 Pfam PF01649 Ribosomal protein S20 2 84 5.8E-28 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS04920 052e9068162a4c2667f41ae6dbf305b1 87 SUPERFAMILY SSF46992 3 86 6.54E-32 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 SUPERFAMILY SSF51206 23 162 1.44E-30 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.4E-15 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 SUPERFAMILY SSF46785 165 245 6.34E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 Gene3D G3DSA:1.10.10.10 166 250 2.9E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 Gene3D G3DSA:2.60.120.10 24 165 1.8E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.1E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.1E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 SMART SM00419 187 235 1.2E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 SMART SM00100 30 151 3.5E-21 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS16520 88c345fe7dba387b48b21882d466886d 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 3.8E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 1.6E-20 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.3E-39 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.3E-39 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.3E-39 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.3E-39 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.048 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 1.5E-17 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CPU03_RS07095 584cf505c7a1458140f68c2cfd223c5b 127 Gene3D G3DSA:1.20.5.1030 68 119 7.2E-19 T 29-03-2018 CPU03_RS15855 8700b0720c729c8feb77e5144d02ec1f 328 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 251 3.9E-27 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS15855 8700b0720c729c8feb77e5144d02ec1f 328 Gene3D G3DSA:3.40.50.300 62 262 2.7E-34 T 29-03-2018 CPU03_RS15855 8700b0720c729c8feb77e5144d02ec1f 328 Gene3D G3DSA:1.10.8.60 263 328 0.0044 T 29-03-2018 CPU03_RS15855 8700b0720c729c8feb77e5144d02ec1f 328 SUPERFAMILY SSF52540 86 320 1.93E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15855 8700b0720c729c8feb77e5144d02ec1f 328 SMART SM00382 122 254 2.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 Pfam PF00854 POT family 75 432 7.8E-43 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 477 5.8E-87 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 Gene3D G3DSA:1.20.1250.20 251 476 2.2E-12 T 29-03-2018 CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 Gene3D G3DSA:1.20.1250.20 6 202 3.5E-23 T 29-03-2018 CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 SUPERFAMILY SSF103473 2 204 5.67E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01240 14421d63fc330d924cff64c8a6b0256c 485 SUPERFAMILY SSF103473 247 474 5.67E-28 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Gene3D G3DSA:3.30.70.100 2 96 1.8E-19 T 29-03-2018 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Gene3D G3DSA:3.90.870.10 192 391 3.0E-57 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 PIRSF PIRSF006256 2 761 8.0E-272 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Gene3D G3DSA:3.30.420.40 413 505 0.0011 T 29-03-2018 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 752 8.6E-254 T 29-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Pfam PF01300 Telomere recombination 209 383 1.5E-50 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 SUPERFAMILY SSF54975 6 89 1.94E-18 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Pfam PF07503 HypF finger 156 187 1.6E-15 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Pfam PF07503 HypF finger 106 139 6.3E-16 T 29-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 SUPERFAMILY SSF55821 174 394 2.14E-50 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 SUPERFAMILY SSF53067 679 754 1.2E-5 T 29-03-2018 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Pfam PF00708 Acylphosphatase 8 88 5.2E-16 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CPU03_RS10830 fbb913fe216424a7eef4ce4a9d2ff041 774 Gene3D G3DSA:3.30.420.40 580 731 8.3E-28 T 29-03-2018 CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 Gene3D G3DSA:3.60.20.10 2 191 3.8E-50 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.5E-123 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 Gene3D G3DSA:3.40.50.620 192 514 3.1E-88 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 Pfam PF00733 Asparagine synthase 212 511 2.6E-98 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 SUPERFAMILY SSF52402 209 483 4.45E-74 T 29-03-2018 CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 SUPERFAMILY SSF56235 1 196 1.03E-58 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.0E-42 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 PIRSF PIRSF001589 362 507 1.1E-27 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CPU03_RS12350 04c9170bda2be8456195e54b9239cdfd 553 PIRSF PIRSF001589 1 367 1.1E-111 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 29-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 29-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 SUPERFAMILY SSF51621 6 877 0.0 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 877 4.9E-292 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.5E-68 T 29-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 Gene3D G3DSA:3.20.20.60 373 584 5.1E-4 T 29-03-2018 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 Gene3D G3DSA:1.20.1440.90 273 372 3.7E-24 T 29-03-2018 CPU03_RS07825 38999883222eb4bc6744cb862575572c 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.49 T 29-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 SMART SM00382 23 205 1.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 Gene3D G3DSA:2.40.50.100 274 349 4.8E-20 T 29-03-2018 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 SUPERFAMILY SSF50331 237 350 9.99E-20 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 5.0E-149 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 Pfam PF00005 ABC transporter 17 156 6.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 Gene3D G3DSA:3.40.50.300 10 253 4.2E-53 T 29-03-2018 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 SUPERFAMILY SSF52540 5 221 1.04E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12700 f32ad5d11e858a9a74c8cc7b04093efc 352 Pfam PF03459 TOBE domain 290 350 2.3E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 SMART SM00382 35 227 1.6E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 262 7.2E-114 T 29-03-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 SUPERFAMILY SSF52540 6 237 1.41E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 Pfam PF00005 ABC transporter 26 177 3.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 Gene3D G3DSA:3.40.50.300 1 261 5.7E-64 T 29-03-2018 CPU03_RS15265 17c4ac3667a18cea36eeb5591d18ea9c 270 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 PIRSF PIRSF002131 1 129 6.0E-53 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 Gene3D G3DSA:3.30.420.80 3 129 1.2E-44 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CPU03_RS09495 b3f2d60e9479262be013fc0afb0be596 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 29-03-2018 CPU03_RS05555 ed61ca8bcb99b5e5ab384260bde5f273 227 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.6E-50 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CPU03_RS05555 ed61ca8bcb99b5e5ab384260bde5f273 227 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.583 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CPU03_RS05555 ed61ca8bcb99b5e5ab384260bde5f273 227 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 7.4E-79 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CPU03_RS05555 ed61ca8bcb99b5e5ab384260bde5f273 227 SMART SM01207 10 185 5.3E-86 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Gene3D G3DSA:3.30.1370.20 436 519 2.3E-41 T 29-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 PIRSF PIRSF000101 6 570 8.2E-284 T 29-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 SUPERFAMILY SSF56176 13 272 1.87E-70 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Gene3D G3DSA:3.30.43.10 2 104 2.9E-9 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Gene3D G3DSA:3.30.70.610 270 345 1.2E-20 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Gene3D G3DSA:3.30.70.610 349 435 1.8E-29 T 29-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Gene3D G3DSA:3.30.465.10 108 269 1.1E-78 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 SUPERFAMILY SSF55103 277 568 4.14E-114 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Pfam PF09330 D-lactate dehydrogenase, membrane binding 279 568 5.9E-145 T 29-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CPU03_RS03085 9d2275c9d066a1b7f1ee438dfc7d0c98 574 Pfam PF01565 FAD binding domain 48 167 1.2E-6 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 Gene3D G3DSA:1.20.1250.20 3 192 1.3E-8 T 29-03-2018 CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 Gene3D G3DSA:1.20.1250.20 198 412 3.5E-21 T 29-03-2018 CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 409 3.2E-197 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 SUPERFAMILY SSF103473 8 410 1.96E-32 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 Pfam PF03825 Nucleoside H+ symporter 1 407 5.1E-170 T 29-03-2018 CPU03_RS10405 878a0591a182e0a281ac031df434b7cd 417 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 41.955 T 29-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 Gene3D G3DSA:1.10.1710.10 1 122 3.2E-40 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 SMART SM00945 5 120 4.5E-57 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 SUPERFAMILY SSF48657 5 118 2.49E-38 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 Pfam PF04352 ProQ/FINO family 8 116 3.2E-41 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 234 27.569 T 29-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CPU03_RS16145 616a23524df5819a94648deeebbacaaf 234 Pfam PF17516 ProQ C-terminal domain 185 234 8.1E-23 T 29-03-2018 IPR035236 RNA chaperone ProQ, C-terminal CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 Gene3D G3DSA:1.20.1090.10 182 385 8.6E-44 T 29-03-2018 CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 Gene3D G3DSA:3.40.50.1970 9 181 1.2E-45 T 29-03-2018 CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 SUPERFAMILY SSF56796 1 383 1.22E-111 T 29-03-2018 CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS06760 5ec1f9eafbcd1140ce1f3519dcd5830f 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 361 2.2E-95 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 Gene3D G3DSA:3.90.1150.10 354 484 8.8E-13 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 SUPERFAMILY SSF53383 113 482 1.08E-75 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 SMART SM00345 18 77 5.0E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 Pfam PF00155 Aminotransferase class I and II 132 406 2.1E-17 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 Gene3D G3DSA:3.40.640.10 151 353 1.9E-37 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.1E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 Gene3D G3DSA:1.10.10.10 2 78 5.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14670 1ba0796cb3a2a460d758f7ed93bf69e7 485 SUPERFAMILY SSF46785 7 86 4.55E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS17020 72f84a961ca688d76c7a450b3ef12ef5 311 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 309 6.9E-64 T 29-03-2018 IPR010106 Recombination-promoting nuclease RpnA CPU03_RS17020 72f84a961ca688d76c7a450b3ef12ef5 311 Gene3D G3DSA:1.10.10.60 249 309 1.4E-6 T 29-03-2018 CPU03_RS17020 72f84a961ca688d76c7a450b3ef12ef5 311 Pfam PF04754 Putative transposase, YhgA-like 7 208 1.6E-88 T 29-03-2018 IPR006842 Transposase (putative), YhgA-like CPU03_RS16895 22a90daf7b77f6c8c152513f408dd852 251 Gene3D G3DSA:3.40.50.300 54 235 1.8E-13 T 29-03-2018 CPU03_RS16895 22a90daf7b77f6c8c152513f408dd852 251 SMART SM00382 100 232 3.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS16895 22a90daf7b77f6c8c152513f408dd852 251 PIRSF PIRSF003073 3 251 8.7E-75 T 29-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CPU03_RS16895 22a90daf7b77f6c8c152513f408dd852 251 SUPERFAMILY SSF52540 86 228 2.99E-20 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16895 22a90daf7b77f6c8c152513f408dd852 251 Pfam PF01695 IstB-like ATP binding protein 56 229 8.1E-53 T 29-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CPU03_RS05265 74ff3025ee8c871ef8758498e8572085 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CPU03_RS05265 74ff3025ee8c871ef8758498e8572085 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.4E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CPU03_RS05265 74ff3025ee8c871ef8758498e8572085 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.079 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CPU03_RS05265 74ff3025ee8c871ef8758498e8572085 130 Gene3D G3DSA:3.30.230.10 3 130 2.3E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS05265 74ff3025ee8c871ef8758498e8572085 130 SUPERFAMILY SSF54211 5 130 3.0E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 SMART SM00421 171 228 6.0E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 4.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 4.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 4.3E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 226 1.7E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 SUPERFAMILY SSF46894 165 234 1.6E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 SUPERFAMILY SSF75516 10 152 6.15E-37 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 ProSitePatterns PS00622 LuxR-type HTH domain signature. 188 215 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 Gene3D G3DSA:1.10.10.10 166 239 2.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 Gene3D G3DSA:3.30.450.80 4 157 2.8E-33 T 29-03-2018 CPU03_RS12490 389a29ae251e0d8ff382cf32e9442bc3 239 Pfam PF03472 Autoinducer binding domain 10 150 1.7E-31 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 SUPERFAMILY SSF55347 130 239 7.63E-35 T 29-03-2018 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 SUPERFAMILY SSF51735 4 129 1.02E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 SUPERFAMILY SSF51735 239 270 1.02E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 8.2E-104 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 128 1.9E-42 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 Gene3D G3DSA:3.30.360.10 129 237 2.1E-33 T 29-03-2018 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 268 34.316 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 PIRSF PIRSF000161 3 271 4.1E-88 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 Gene3D G3DSA:3.40.50.720 1 124 3.0E-30 T 29-03-2018 CPU03_RS04865 e90bbc482c3c52e2909b7783dc06dba8 272 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 267 4.6E-40 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS03715 16d65a63734472f788c0461133e326cb 246 Pfam PF05818 Enterobacterial TraT complement resistance protein 34 246 9.4E-80 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CPU03_RS03715 16d65a63734472f788c0461133e326cb 246 Gene3D G3DSA:3.30.450.90 151 244 0.11 T 29-03-2018 CPU03_RS03715 16d65a63734472f788c0461133e326cb 246 PIRSF PIRSF002859 1 246 7.0E-131 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 Pfam PF07840 FadR C-terminal domain 72 234 3.1E-70 T 29-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 Gene3D G3DSA:1.10.10.10 1 79 4.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 SMART SM00345 12 71 1.0E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 SUPERFAMILY SSF46785 11 87 3.21E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 3.9E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 155.943 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 SUPERFAMILY SSF48008 79 229 4.19E-61 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 Gene3D G3DSA:1.20.120.530 80 238 1.5E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS01265 45a031a91931c8281823b233b4de3978 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 5.5E-118 T 29-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CPU03_RS11175 54d85d6e03577bff445e539a5c4c9f76 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 38.356 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CPU03_RS11175 54d85d6e03577bff445e539a5c4c9f76 245 Pfam PF13525 Outer membrane lipoprotein 28 236 9.8E-84 T 29-03-2018 CPU03_RS11175 54d85d6e03577bff445e539a5c4c9f76 245 Gene3D G3DSA:1.25.20.10 30 242 1.8E-16 T 29-03-2018 CPU03_RS11175 54d85d6e03577bff445e539a5c4c9f76 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 3.5E-88 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD CPU03_RS11175 54d85d6e03577bff445e539a5c4c9f76 245 SUPERFAMILY SSF48452 28 118 6.58E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Gene3D G3DSA:3.30.2300.10 83 162 2.5E-21 T 29-03-2018 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Pfam PF02926 THUMP domain 44 161 1.2E-24 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Gene3D G3DSA:3.40.250.10 387 482 1.2E-13 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.3E-77 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 SMART SM00981 75 165 1.8E-26 T 29-03-2018 IPR004114 THUMP domain GO:0003723 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 224.675 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 SUPERFAMILY SSF52821 402 481 8.77E-12 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Gene3D G3DSA:3.40.50.620 175 386 1.7E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 SUPERFAMILY SSF143437 1 173 6.98E-48 T 29-03-2018 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 Gene3D G3DSA:3.30.70.1510 2 81 3.0E-21 T 29-03-2018 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 2.8E-131 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 SUPERFAMILY SSF52402 174 372 2.87E-41 T 29-03-2018 CPU03_RS03415 90ef6473654fe9627bb346f6e2d6d743 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.4E-40 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CPU03_RS10515 e078d8d22640da8016383549344add75 304 Hamap MF_01418 Agmatinase [speB]. 1 304 67.553 T 29-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 CPU03_RS10515 e078d8d22640da8016383549344add75 304 SUPERFAMILY SSF52768 14 301 1.17E-92 T 29-03-2018 CPU03_RS10515 e078d8d22640da8016383549344add75 304 Gene3D G3DSA:3.40.800.10 6 304 2.5E-94 T 29-03-2018 CPU03_RS10515 e078d8d22640da8016383549344add75 304 PIRSF PIRSF036979 15 304 3.8E-99 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CPU03_RS10515 e078d8d22640da8016383549344add75 304 Pfam PF00491 Arginase family 34 297 7.3E-88 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 CPU03_RS10515 e078d8d22640da8016383549344add75 304 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 6.3E-106 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CPU03_RS10515 e078d8d22640da8016383549344add75 304 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CPU03_RS13335 509264d40a801030648ed0b878813bb6 324 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.733 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13335 509264d40a801030648ed0b878813bb6 324 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13335 509264d40a801030648ed0b878813bb6 324 Pfam PF00146 NADH dehydrogenase 17 317 9.2E-117 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13335 509264d40a801030648ed0b878813bb6 324 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 Gene3D G3DSA:3.10.310.10 125 261 3.6E-49 T 29-03-2018 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 Pfam PF01678 Diaminopimelate epimerase 152 267 6.9E-30 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.7E-34 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.21 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 Gene3D G3DSA:3.10.310.10 1 124 6.7E-50 T 29-03-2018 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 2.6E-100 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CPU03_RS07365 ebd7e317b2589913a6e014556847dc6d 274 SUPERFAMILY SSF54506 2 273 2.2E-54 T 29-03-2018 CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 PIRSF PIRSF004916 1 109 6.4E-53 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 Pfam PF04269 Protein of unknown function, DUF440 6 109 9.0E-47 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 109 33.216 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 SUPERFAMILY SSF102816 1 109 3.14E-49 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 109 3.0E-46 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01015 82b5215078f027f53c7389e4e026cb60 109 Gene3D G3DSA:3.10.450.140 8 108 9.3E-45 T 29-03-2018 IPR007376 dsDNA mimic, putative CPU03_RS01035 6f3939b2aae5792cfd5e98d5d35f3458 306 Gene3D G3DSA:1.10.3720.10 2 294 9.4E-44 T 29-03-2018 CPU03_RS01035 6f3939b2aae5792cfd5e98d5d35f3458 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.4E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS01035 6f3939b2aae5792cfd5e98d5d35f3458 306 SUPERFAMILY SSF161098 88 290 2.78E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 6.2E-55 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 SMART SM00855 3 157 3.4E-21 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 SUPERFAMILY SSF53254 1 208 1.7E-54 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 PIRSF PIRSF000709 1 95 2.6E-8 T 29-03-2018 CPU03_RS05120 ff49a223c1d97b10aeda9fb7a814591f 215 Gene3D G3DSA:3.40.50.1240 1 214 1.6E-52 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Gene3D G3DSA:2.30.30.60 936 985 5.2E-11 T 29-03-2018 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 481 817 1.9E-110 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Pfam PF12795 Mechanosensitive ion channel porin domain 34 260 1.3E-52 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Gene3D G3DSA:3.30.70.100 988 1082 2.5E-8 T 29-03-2018 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 SUPERFAMILY SSF82861 837 918 8.63E-6 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 SUPERFAMILY SSF82689 988 1083 8.5E-13 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Pfam PF00924 Mechanosensitive ion channel 878 1075 1.5E-46 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 SUPERFAMILY SSF50182 921 986 6.54E-16 T 29-03-2018 IPR010920 LSM domain CPU03_RS06360 0ac06c18a47104d896736fb60c32509a 1105 Gene3D G3DSA:1.20.5.110 169 656 9.7E-7 T 29-03-2018 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 Gene3D G3DSA:3.40.50.620 12 226 5.4E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 Pfam PF11734 TilS substrate C-terminal domain 362 434 5.4E-26 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 Pfam PF01171 PP-loop family 20 198 4.1E-56 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 SUPERFAMILY SSF56037 324 437 3.66E-31 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 363 407 8.4E-14 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 308 23.211 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 SUPERFAMILY SSF52402 10 232 5.39E-60 T 29-03-2018 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 Pfam PF09179 TilS substrate binding domain 247 314 2.7E-20 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 202 4.6E-50 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 SUPERFAMILY SSF82829 235 317 3.14E-24 T 29-03-2018 CPU03_RS04080 ff5ed2348bc31daf8cf05460d444eb18 439 SMART SM00977 362 434 6.3E-27 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 Gene3D G3DSA:3.10.290.10 2 76 2.8E-21 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 SUPERFAMILY SSF55120 77 322 3.5E-78 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 SMART SM00363 18 83 2.2E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 5.4E-31 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 Pfam PF01479 S4 domain 18 65 6.0E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 Gene3D G3DSA:3.30.2350.10 83 316 2.4E-68 T 29-03-2018 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 311 1.4E-106 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS11185 752d037d99c5cdfe35b031455a430a0d 326 SUPERFAMILY SSF55174 17 69 3.53E-11 T 29-03-2018 CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 SUPERFAMILY SSF46785 5 109 4.73E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 Gene3D G3DSA:3.40.190.10 204 324 1.3E-4 T 29-03-2018 CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 Pfam PF03466 LysR substrate binding domain 95 303 1.1E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 Gene3D G3DSA:3.40.190.10 93 203 5.4E-15 T 29-03-2018 CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 SUPERFAMILY SSF53850 92 302 5.97E-28 T 29-03-2018 CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 Gene3D G3DSA:1.10.10.10 1 92 2.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05225 4409776a78cef90f40947600f1e8511b 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.9E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS05440 e2cad7cbad69c2c3af8b802937276f86 338 Pfam PF01734 Patatin-like phospholipase 27 195 1.7E-21 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CPU03_RS05440 e2cad7cbad69c2c3af8b802937276f86 338 Gene3D G3DSA:3.40.1090.10 11 218 3.2E-29 T 29-03-2018 CPU03_RS05440 e2cad7cbad69c2c3af8b802937276f86 338 SUPERFAMILY SSF52151 22 295 1.02E-45 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Gene3D G3DSA:3.30.70.20 71 125 1.3E-14 T 29-03-2018 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Gene3D G3DSA:3.30.70.20 19 70 2.9E-9 T 29-03-2018 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 SUPERFAMILY SSF54862 1 170 1.88E-43 T 29-03-2018 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Gene3D G3DSA:3.30.70.20 1 18 0.0078 T 29-03-2018 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Gene3D G3DSA:3.30.70.20 126 179 9.9E-11 T 29-03-2018 CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Pfam PF13247 4Fe-4S dicluster domain 57 156 6.0E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS10835 bf0055d840dfc524f7f9d46887778da6 180 Pfam PF12800 4Fe-4S binding domain 9 22 0.034 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Gene3D G3DSA:3.40.50.300 567 817 1.0E-42 T 29-03-2018 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Pfam PF01624 MutS domain I 11 122 4.6E-41 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 844 25.516 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Gene3D G3DSA:1.10.1420.10 408 535 6.5E-30 T 29-03-2018 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SMART SM00534 607 794 1.9E-121 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Pfam PF05192 MutS domain III 272 559 2.5E-38 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SMART SM00533 286 591 3.3E-103 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Pfam PF00488 MutS domain V 610 797 1.1E-87 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 PIRSF PIRSF037677 3 821 1.1E-152 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Gene3D G3DSA:1.10.1420.10 266 407 1.9E-34 T 29-03-2018 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SUPERFAMILY SSF53150 117 269 3.79E-43 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SUPERFAMILY SSF48334 270 563 6.67E-87 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 849 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SUPERFAMILY SSF52540 567 797 6.94E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Gene3D G3DSA:3.40.1170.10 1 134 2.8E-46 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Gene3D G3DSA:3.30.420.110 135 265 1.1E-28 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Pfam PF05188 MutS domain II 131 256 1.2E-33 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 Pfam PF05190 MutS family domain IV 428 517 4.6E-28 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CPU03_RS10975 be4546c49f22f12fe595ebd2417afd3f 852 SUPERFAMILY SSF55271 5 116 7.46E-43 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 5.6E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 Gene3D G3DSA:3.40.50.300 8 331 5.1E-82 T 29-03-2018 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 Pfam PF00005 ABC transporter 41 192 6.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 SUPERFAMILY SSF52540 23 264 1.11E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.1E-28 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS01020 36dac86cec7f7228441440416a1c756d 334 SMART SM00382 49 242 9.7E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS02575 8a272a5bb40dff2e28b1ca3ddbffb8e4 851 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 74 756 51.479 T 29-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 CPU03_RS02575 8a272a5bb40dff2e28b1ca3ddbffb8e4 851 Pfam PF00535 Glycosyl transferase family 2 257 439 2.1E-22 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS02575 8a272a5bb40dff2e28b1ca3ddbffb8e4 851 SUPERFAMILY SSF53448 255 541 1.41E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02575 8a272a5bb40dff2e28b1ca3ddbffb8e4 851 Gene3D G3DSA:3.90.550.10 234 515 3.1E-20 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS16250 0693f086fe006a127bb518efc6270b86 283 Gene3D G3DSA:3.90.1720.10 59 201 8.9E-18 T 29-03-2018 CPU03_RS16250 0693f086fe006a127bb518efc6270b86 283 SUPERFAMILY SSF54001 145 277 7.85E-41 T 29-03-2018 CPU03_RS16250 0693f086fe006a127bb518efc6270b86 283 Pfam PF00877 NlpC/P60 family 165 275 1.3E-31 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CPU03_RS16250 0693f086fe006a127bb518efc6270b86 283 Gene3D G3DSA:2.30.260.10 202 281 2.4E-16 T 29-03-2018 CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 Pfam PF03315 Serine dehydratase beta chain 3 156 3.5E-57 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 Pfam PF03313 Serine dehydratase alpha chain 185 449 1.2E-95 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 SUPERFAMILY SSF143548 16 159 9.68E-47 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 Gene3D G3DSA:3.30.1330.90 10 159 3.5E-52 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 452 8.8E-226 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CPU03_RS00050 ed6e416e306857dd5da5f4e12a144e2e 455 Gene3D G3DSA:1.10.4100.10 264 445 1.4E-32 T 29-03-2018 CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 SUPERFAMILY SSF53850 97 293 2.9E-16 T 29-03-2018 CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 2.3E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 Gene3D G3DSA:3.40.190.10 88 186 5.8E-6 T 29-03-2018 CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 Pfam PF03466 LysR substrate binding domain 93 294 3.9E-9 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 SUPERFAMILY SSF46785 4 84 8.84E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 Gene3D G3DSA:1.10.10.10 2 85 9.8E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08740 fba1ebade0fa3f7fe83508363242e49e 297 Gene3D G3DSA:3.40.190.10 187 265 0.0033 T 29-03-2018 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 10 354 1.9E-113 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 Gene3D G3DSA:3.40.50.2000 179 342 1.1E-30 T 29-03-2018 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 SUPERFAMILY SSF53756 11 358 6.96E-129 T 29-03-2018 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 347 7.5E-36 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 13 358 35.524 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 150 4.0E-48 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CPU03_RS04670 d276bf839461b668d368abae99230dd1 359 Gene3D G3DSA:3.40.50.2000 5 178 8.6E-46 T 29-03-2018 CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 SMART SM00530 1 51 1.8E-4 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 Pfam PF01381 Helix-turn-helix 2 47 3.8E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 Gene3D G3DSA:2.10.109.10 72 202 1.8E-17 T 29-03-2018 CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 SUPERFAMILY SSF47413 2 53 1.13E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 SUPERFAMILY SSF51306 110 204 4.88E-25 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 Pfam PF00717 Peptidase S24-like 118 184 2.3E-10 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS15860 48db8d938c1a67df1b572b41f7450953 209 Gene3D G3DSA:1.10.260.40 1 53 1.8E-10 T 29-03-2018 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 SUPERFAMILY SSF53732 389 869 1.57E-152 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Pfam PF00330 Aconitase family (aconitate hydratase) 480 827 2.9E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 SUPERFAMILY SSF52016 172 379 5.49E-68 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Gene3D G3DSA:3.30.499.10 411 529 1.1E-10 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 ProSitePatterns PS00450 Aconitase family signature 1. 711 728 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 10 862 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 SUPERFAMILY SSF74778 11 169 7.45E-65 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Gene3D G3DSA:3.40.1060.10 530 691 1.1E-28 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Gene3D G3DSA:3.20.19.10 171 372 4.1E-33 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Pfam PF11791 Aconitate B N-terminal domain 13 165 1.6E-64 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 391 2.1E-94 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 PIRSF PIRSF036687 8 868 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CPU03_RS04540 8707591f853b236acb73211866ee06ac 874 Gene3D G3DSA:3.30.499.10 692 874 5.6E-53 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 20 233 2.0E-72 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 Gene3D G3DSA:1.20.950.20 14 244 1.3E-41 T 29-03-2018 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 SUPERFAMILY SSF81342 18 234 6.2E-38 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 189 206 - T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 140 159 2.2E-43 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 62 86 2.2E-43 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 189 211 2.2E-43 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 24 47 2.2E-43 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 220 233 2.2E-43 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CPU03_RS10340 b6d7d3f306f48c540bad81d5774ae83c 244 Pfam PF01292 Prokaryotic cytochrome b561 22 228 3.0E-32 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 296 309 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 318 334 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 374 386 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 7 18 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 199 220 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PRINTS PR00471 Acetate kinase family signature 169 182 1.9E-47 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 160.885 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 392 6.1E-155 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 Gene3D G3DSA:3.30.420.40 6 191 4.4E-63 T 29-03-2018 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 Pfam PF00871 Acetokinase family 7 386 1.7E-151 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 66.173 T 29-03-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 SUPERFAMILY SSF53067 153 392 7.92E-84 T 29-03-2018 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 Gene3D G3DSA:3.30.420.40 193 402 5.6E-73 T 29-03-2018 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 SUPERFAMILY SSF53067 5 189 9.71E-62 T 29-03-2018 CPU03_RS03745 b4d8d55a1bf808bb70a5fc74a3bdaf0e 402 PIRSF PIRSF000722 4 397 1.3E-131 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS11330 0a87f0317ff86c5f066b3c2c57ebb63d 254 Pfam PF07179 SseB protein N-terminal domain 3 110 1.2E-20 T 29-03-2018 IPR009839 SseB protein N-terminal domain CPU03_RS11330 0a87f0317ff86c5f066b3c2c57ebb63d 254 Pfam PF14581 SseB protein C-terminal domain 126 238 8.4E-20 T 29-03-2018 IPR027945 SseB protein, C-terminal CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Gene3D G3DSA:2.160.10.10 87 257 1.8E-36 T 29-03-2018 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 2.0E-12 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 SUPERFAMILY SSF51161 1 256 8.04E-80 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 6.7E-26 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Gene3D G3DSA:1.10.166.10 3 69 7.2E-29 T 29-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.705 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 3.1E-159 T 29-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CPU03_RS04205 f349b79787ed6b7c38a57538c10cb2bf 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS05860 56c0994a4680954f54a2429a6a375ea8 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 111 495 4.7E-154 T 29-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CPU03_RS05860 56c0994a4680954f54a2429a6a375ea8 496 SMART SM00858 11 82 2.6E-16 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CPU03_RS05860 56c0994a4680954f54a2429a6a375ea8 496 Pfam PF08666 SAF domain 11 82 4.7E-14 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 SUPERFAMILY SSF53067 280 533 8.1E-54 T 29-03-2018 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 7.8E-41 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 Gene3D G3DSA:3.30.420.40 276 545 1.8E-63 T 29-03-2018 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 Gene3D G3DSA:3.30.420.40 1 263 5.3E-69 T 29-03-2018 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 4.0E-31 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 538 1.5E-208 T 29-03-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 PIRSF PIRSF000538 2 542 1.0E-71 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS08795 391f22d5d2d53e30bb40016c5cb99347 545 SUPERFAMILY SSF53067 4 263 9.26E-62 T 29-03-2018 CPU03_RS10180 a4a1ad0707ec5d512e133a2cf4c899e6 209 Pfam PF00589 Phage integrase family 6 176 7.6E-43 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS10180 a4a1ad0707ec5d512e133a2cf4c899e6 209 Gene3D G3DSA:1.10.443.10 5 182 2.8E-38 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS10180 a4a1ad0707ec5d512e133a2cf4c899e6 209 SUPERFAMILY SSF56349 4 183 1.15E-44 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS09845 3bf16a5fd4af2d12eee43a1c10375f05 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 1.0E-13 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CPU03_RS09845 3bf16a5fd4af2d12eee43a1c10375f05 80 Pfam PF06196 Protein of unknown function (DUF997) 7 76 3.7E-27 T 29-03-2018 IPR010398 Protein of unknown function DUF997 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SMART SM00954 235 345 2.3E-64 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Pfam PF02824 TGS domain 387 446 1.2E-20 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Gene3D G3DSA:3.10.20.30 381 456 9.0E-23 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Pfam PF13291 ACT domain 618 694 1.7E-15 T 29-03-2018 IPR002912 ACT domain CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SUPERFAMILY SSF81271 374 446 5.45E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Gene3D G3DSA:3.30.460.10 192 325 7.2E-41 T 29-03-2018 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SUPERFAMILY SSF55021 624 694 1.87E-5 T 29-03-2018 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SMART SM00471 41 153 1.2E-11 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Gene3D G3DSA:3.30.70.260 618 696 3.8E-8 T 29-03-2018 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SUPERFAMILY SSF109604 3 190 1.26E-75 T 29-03-2018 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 SUPERFAMILY SSF81301 180 391 1.63E-63 T 29-03-2018 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 6.2E-37 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 694 3.2E-283 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CPU03_RS08335 130d478511e19a9f09858eb8f406a8d9 697 Pfam PF13328 HD domain 26 175 3.0E-53 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 SUPERFAMILY SSF51735 137 303 1.27E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.6E-44 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 SMART SM01003 4 137 1.7E-75 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 SUPERFAMILY SSF52283 305 359 7.23E-64 T 29-03-2018 CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 SUPERFAMILY SSF52283 1 137 7.23E-64 T 29-03-2018 CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 PIRSF PIRSF000183 1 370 2.6E-148 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 SMART SM01002 149 297 1.1E-81 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 5.0E-80 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 3.1E-154 T 29-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 Gene3D G3DSA:3.40.50.720 1 193 1.1E-45 T 29-03-2018 CPU03_RS12285 7933506009550f81b236f5d3504275fc 370 Gene3D G3DSA:3.40.50.720 194 370 1.5E-41 T 29-03-2018 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Gene3D G3DSA:3.30.499.10 9 184 1.1E-22 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Pfam PF00694 Aconitase C-terminal domain 636 683 4.1E-5 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Gene3D G3DSA:3.30.499.10 300 519 1.9E-32 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 PRINTS PR00415 Aconitase family signature 297 311 3.2E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 PRINTS PR00415 Aconitase family signature 356 367 3.2E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 PRINTS PR00415 Aconitase family signature 140 153 3.2E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 PRINTS PR00415 Aconitase family signature 216 229 3.2E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 PRINTS PR00415 Aconitase family signature 413 426 3.2E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Gene3D G3DSA:3.40.1060.10 185 297 1.3E-26 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Pfam PF00330 Aconitase family (aconitate hydratase) 41 470 5.7E-76 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 Gene3D G3DSA:3.20.19.10 524 753 8.1E-47 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 SUPERFAMILY SSF52016 516 752 2.75E-32 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS15725 5497adf1ae67636c39f6419f2df3a437 753 SUPERFAMILY SSF53732 18 516 2.62E-115 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS08485 39b09b8a229508424a9dcff79dc3e8a3 305 PIRSF PIRSF005355 1 305 1.8E-92 T 29-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CPU03_RS08485 39b09b8a229508424a9dcff79dc3e8a3 305 Pfam PF01040 UbiA prenyltransferase family 27 278 2.6E-37 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CPU03_RS08485 39b09b8a229508424a9dcff79dc3e8a3 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.108 T 29-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CPU03_RS08485 39b09b8a229508424a9dcff79dc3e8a3 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 6.2E-127 T 29-03-2018 CPU03_RS15500 fca3da9800c4fef1e861db0b5b4396e9 265 Gene3D G3DSA:3.40.190.10 69 176 2.6E-13 T 29-03-2018 CPU03_RS15500 fca3da9800c4fef1e861db0b5b4396e9 265 Pfam PF13531 Bacterial extracellular solute-binding protein 5 239 1.6E-40 T 29-03-2018 CPU03_RS15500 fca3da9800c4fef1e861db0b5b4396e9 265 Gene3D G3DSA:3.40.190.10 3 68 9.3E-7 T 29-03-2018 CPU03_RS15500 fca3da9800c4fef1e861db0b5b4396e9 265 SUPERFAMILY SSF53850 5 242 9.31E-33 T 29-03-2018 CPU03_RS01890 fb740e2c7aa291a62b2eee51a1453db3 79 Pfam PF03891 Domain of unknown function (DUF333) 29 75 2.3E-17 T 29-03-2018 IPR005590 Protein of unknown function DUF333 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 SUPERFAMILY SSF54197 5 178 8.61E-72 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 29-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 177 1.4E-69 T 29-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 Gene3D G3DSA:3.30.428.10 46 165 1.6E-49 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 1.9E-192 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 PIRSF PIRSF000808 1 342 3.2E-121 T 29-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 SUPERFAMILY SSF54197 180 345 7.83E-53 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 346 9.7E-65 T 29-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CPU03_RS12660 82e8cf8db2294ab352a53b25b03f31f7 347 Gene3D G3DSA:3.30.428.10 166 346 4.9E-53 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 Gene3D G3DSA:1.10.10.10 11 97 9.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 Pfam PF09339 IclR helix-turn-helix domain 14 63 5.5E-13 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 Pfam PF01614 Bacterial transcriptional regulator 128 253 4.0E-43 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 Gene3D G3DSA:3.30.450.40 98 262 6.0E-56 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 SUPERFAMILY SSF46785 12 85 4.85E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 SUPERFAMILY SSF55781 76 257 6.08E-54 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS00725 652d0dfb2378c2a1cf494030c17cdb1c 262 SMART SM00346 12 101 2.4E-34 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CPU03_RS15390 87be209ab28451bec1c5c98baf0b98fa 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 246 8.6E-63 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CPU03_RS15390 87be209ab28451bec1c5c98baf0b98fa 267 SUPERFAMILY SSF51621 2 255 5.02E-84 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS15390 87be209ab28451bec1c5c98baf0b98fa 267 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 8 255 2.5E-128 T 29-03-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 CPU03_RS15390 87be209ab28451bec1c5c98baf0b98fa 267 Gene3D G3DSA:3.20.20.60 3 263 6.2E-54 T 29-03-2018 CPU03_RS00765 c10c059925d6c252d5d6d5ff81439dc3 125 SUPERFAMILY SSF101756 24 122 1.28E-19 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS00765 c10c059925d6c252d5d6d5ff81439dc3 125 Pfam PF04076 Bacterial OB fold (BOF) protein 23 117 1.5E-18 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS00765 c10c059925d6c252d5d6d5ff81439dc3 125 Gene3D G3DSA:2.40.50.200 16 124 2.0E-17 T 29-03-2018 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 Gene3D G3DSA:3.90.1150.10 276 415 5.6E-58 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 8.6E-188 T 29-03-2018 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 Gene3D G3DSA:3.40.640.10 37 275 3.0E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.426 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 PIRSF PIRSF000412 1 417 1.1E-172 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CPU03_RS11265 a325e7cf30285b16bc36d174c45f2b57 417 SUPERFAMILY SSF53383 6 416 2.72E-181 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS03460 6a222f027c4b843f9ae30624a75d57bf 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.027 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CPU03_RS03460 6a222f027c4b843f9ae30624a75d57bf 149 Pfam PF03477 ATP cone domain 50 136 9.6E-17 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CPU03_RS03460 6a222f027c4b843f9ae30624a75d57bf 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.2E-75 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.1E-116 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 9.3E-39 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 6.8E-12 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.0E-175 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 Pfam PF03477 ATP cone domain 6 92 2.8E-15 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 SUPERFAMILY SSF51998 222 740 4.88E-167 T 29-03-2018 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 SUPERFAMILY SSF48168 10 221 4.84E-72 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 Gene3D G3DSA:3.20.70.20 122 739 1.7E-145 T 29-03-2018 CPU03_RS13520 f9654f72f5b45ba52ca40cb73570a323 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.1E-31 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 Gene3D G3DSA:1.10.287.180 3 76 1.2E-32 T 29-03-2018 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 SUPERFAMILY SSF46557 3 78 4.19E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 PIRSF PIRSF006092 1 158 1.3E-57 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 Gene3D G3DSA:3.10.50.30 77 158 1.7E-29 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.951 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 SUPERFAMILY SSF54534 81 157 3.43E-25 T 29-03-2018 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.3E-30 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CPU03_RS06070 260cc4757d9ce32e4a2f1ff2a623a2bf 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 5.3E-60 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CPU03_RS02485 f20b958484834d829380de02dcd6aaf5 356 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 20 354 2.4E-127 T 29-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CPU03_RS02485 f20b958484834d829380de02dcd6aaf5 356 Pfam PF03601 Conserved hypothetical protein 698 22 334 2.4E-107 T 29-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 SUPERFAMILY SSF51717 8 274 3.14E-105 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 Pfam PF00809 Pterin binding enzyme 18 257 1.9E-89 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 6.0E-103 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 Gene3D G3DSA:3.20.20.20 14 150 1.3E-58 T 29-03-2018 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 Gene3D G3DSA:3.20.20.20 151 276 1.2E-51 T 29-03-2018 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS06050 4d6fe90a0cf3d879690fbe1c044cfd41 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CPU03_RS02430 0c5ef80e15fc5748a8e10c009c6e2a83 600 Pfam PF05170 AsmA family 5 176 5.2E-15 T 29-03-2018 IPR007844 AsmA CPU03_RS02430 0c5ef80e15fc5748a8e10c009c6e2a83 600 Pfam PF13502 AsmA-like C-terminal region 358 541 7.8E-22 T 29-03-2018 IPR032712 AsmA-like, C-terminal CPU03_RS07630 732c31d41741c45de3b9eed67edbebf0 364 Gene3D G3DSA:3.40.50.2000 1 185 3.2E-8 T 29-03-2018 CPU03_RS07630 732c31d41741c45de3b9eed67edbebf0 364 SUPERFAMILY SSF53756 2 342 2.98E-54 T 29-03-2018 CPU03_RS07630 732c31d41741c45de3b9eed67edbebf0 364 Pfam PF00534 Glycosyl transferases group 1 198 334 3.7E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS07630 732c31d41741c45de3b9eed67edbebf0 364 Pfam PF13439 Glycosyltransferase Family 4 13 183 3.3E-16 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CPU03_RS07630 732c31d41741c45de3b9eed67edbebf0 364 Gene3D G3DSA:3.40.50.2000 186 343 1.7E-29 T 29-03-2018 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 Gene3D G3DSA:1.10.10.10 1 86 2.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 Gene3D G3DSA:3.40.190.10 87 174 8.5E-21 T 29-03-2018 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.9E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 Gene3D G3DSA:3.40.190.10 175 264 5.6E-20 T 29-03-2018 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 Pfam PF03466 LysR substrate binding domain 89 288 1.3E-45 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 SUPERFAMILY SSF46785 1 109 3.98E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07270 406adc4f99c52303ba128726faebf900 320 SUPERFAMILY SSF53850 89 290 2.64E-42 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 42.578 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 6.8E-228 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 Gene3D G3DSA:3.30.230.10 288 459 2.9E-31 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 Pfam PF13481 AAA domain 88 225 4.5E-14 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 11 35 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 177 201 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 127 144 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 325 348 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 86 114 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 216 244 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 PRINTS PR01874 DNA repair protein radA signature 251 277 1.8E-93 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 Gene3D G3DSA:3.40.50.300 76 286 2.5E-39 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 SUPERFAMILY SSF54211 258 272 1.06E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 SUPERFAMILY SSF54211 306 458 1.06E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 SMART SM00382 94 248 1.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.0E-9 T 29-03-2018 CPU03_RS05145 9425f8c751b9297cc9861eba726b3a25 461 SUPERFAMILY SSF52540 72 290 2.55E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 SUPERFAMILY SSF51261 164 408 7.85E-70 T 29-03-2018 IPR011055 Duplicated hybrid motif CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 173 5.3E-8 T 29-03-2018 IPR007340 Opacity-associated protein A CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 Gene3D G3DSA:3.10.350.10 84 180 3.3E-6 T 29-03-2018 CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 Pfam PF01551 Peptidase family M23 312 406 3.4E-33 T 29-03-2018 IPR016047 Peptidase M23 CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 Gene3D G3DSA:2.70.70.10 279 437 2.0E-44 T 29-03-2018 CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 4.1E-9 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal CPU03_RS01400 fac194b961ed5cd1c627bebef771a544 439 SMART SM00257 97 142 0.0025 T 29-03-2018 IPR018392 LysM domain CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 4.3E-26 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 SMART SM01152 7 83 4.7E-39 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 19.784 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 5 88 2.8E-27 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 SUPERFAMILY SSF69786 4 95 2.75E-32 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CPU03_RS06620 e6eaa0b93899e821cf5630a20e62a958 96 Gene3D G3DSA:3.30.1200.10 1 96 3.2E-31 T 29-03-2018 IPR003746 Protein of unknown function DUF167 CPU03_RS01545 6985c6ecefac7b349f9aafa19e6d4814 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 6.4E-45 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CPU03_RS01545 6985c6ecefac7b349f9aafa19e6d4814 313 Gene3D G3DSA:3.40.50.720 112 281 1.8E-45 T 29-03-2018 CPU03_RS01545 6985c6ecefac7b349f9aafa19e6d4814 313 SUPERFAMILY SSF51735 98 279 2.6E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01545 6985c6ecefac7b349f9aafa19e6d4814 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS01545 6985c6ecefac7b349f9aafa19e6d4814 313 Gene3D G3DSA:3.40.50.720 1 111 2.4E-11 T 29-03-2018 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 34 417 9.1E-141 T 29-03-2018 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 PIRSF PIRSF002808 5 452 3.7E-107 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 Pfam PF07690 Major Facilitator Superfamily 33 400 6.4E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 SUPERFAMILY SSF103473 7 440 2.88E-76 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 ProSitePatterns PS00942 glpT family of transporters signature. 149 165 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 Gene3D G3DSA:1.20.1250.20 17 221 1.2E-34 T 29-03-2018 CPU03_RS01850 3ae6f34abb8f2538e07fc5d601c3fe49 461 Gene3D G3DSA:1.20.1250.20 243 454 4.2E-29 T 29-03-2018 CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 Gene3D G3DSA:3.10.105.10 309 509 5.7E-60 T 29-03-2018 CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 PIRSF PIRSF002741 7 539 1.6E-105 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 SUPERFAMILY SSF53850 34 527 4.09E-134 T 29-03-2018 CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 Gene3D G3DSA:3.40.190.10 174 308 2.5E-37 T 29-03-2018 CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 453 2.9E-77 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS00405 57d92b78e7893d9e7a5f496fdb9414df 540 Gene3D G3DSA:3.90.76.10 61 173 5.5E-28 T 29-03-2018 CPU03_RS00115 edea511f83eccd8f11c21b3db47cc36c 216 Pfam PF06805 Bacteriophage lambda tail assembly protein I 16 97 4.8E-19 T 29-03-2018 IPR010654 Bacteriophage lambda tail assembly I CPU03_RS00125 a9bd16c914f4652542f569407289c597 233 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 15 231 2.7E-88 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CPU03_RS00125 a9bd16c914f4652542f569407289c597 233 Pfam PF05100 Phage minor tail protein L 30 231 5.0E-86 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 Pfam PF00347 Ribosomal protein L6 90 164 4.0E-19 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 Pfam PF00347 Ribosomal protein L6 11 82 7.3E-18 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 Gene3D G3DSA:3.90.930.12 5 85 6.8E-24 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 SUPERFAMILY SSF56053 83 177 1.22E-35 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.8E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.8E-33 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 PIRSF PIRSF002162 1 177 1.7E-43 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 SUPERFAMILY SSF56053 1 82 1.15E-22 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 Gene3D G3DSA:3.90.930.12 86 177 6.4E-39 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.1E-72 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS09455 588f6bcf46ddb35415b81fe4d7e649ea 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.262 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CPU03_RS16135 ec6fb09f45cdba5765697e733feca214 418 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 14 405 8.8E-147 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CPU03_RS16135 ec6fb09f45cdba5765697e733feca214 418 Pfam PF04403 Paraquat-inducible protein A 53 204 1.5E-36 T 29-03-2018 IPR007498 Paraquat-inducible protein A CPU03_RS16135 ec6fb09f45cdba5765697e733feca214 418 Pfam PF04403 Paraquat-inducible protein A 250 406 4.9E-46 T 29-03-2018 IPR007498 Paraquat-inducible protein A CPU03_RS14635 cece9b7b6431fd60e77b6dc5ba79a1c4 104 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 5.1E-21 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CPU03_RS14635 cece9b7b6431fd60e77b6dc5ba79a1c4 104 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.257 T 29-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 SUPERFAMILY SSF53383 6 471 1.75E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 PIRSF PIRSF001386 3 471 2.1E-203 T 29-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 4.6E-295 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 Gene3D G3DSA:3.90.1150.10 20 112 1.0E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 Gene3D G3DSA:3.90.1150.10 289 469 5.0E-68 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 99.494 T 29-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CPU03_RS11585 d14b1ad61d02f1ac316d90a142bc5810 471 Pfam PF01212 Beta-eliminating lyase 49 437 5.2E-92 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 1.6E-21 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 Gene3D G3DSA:3.40.5.10 1 49 3.3E-22 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 Gene3D G3DSA:3.10.430.100 63 148 8.0E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 SUPERFAMILY SSF55653 60 149 5.49E-25 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.4E-24 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.146 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 8.9E-58 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06205 a6cf85a2d71748810e57b6022dc17ec4 149 SUPERFAMILY SSF55658 1 57 1.5E-18 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CPU03_RS04370 a883dbcb8ec0a7299655a9ddd017301b 263 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 241 2.6E-74 T 29-03-2018 IPR018648 Protein of unknown function DUF2076 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 SUPERFAMILY SSF100920 384 540 1.31E-61 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Gene3D G3DSA:3.30.420.40 1 196 5.0E-81 T 29-03-2018 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Gene3D G3DSA:2.60.34.10 390 531 6.9E-65 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Pfam PF00012 Hsp70 protein 4 600 4.2E-267 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Gene3D G3DSA:3.30.420.40 197 366 6.6E-46 T 29-03-2018 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 334 350 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 138 158 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 469 485 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 198 208 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 365 385 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 PRINTS PR00301 70kDa heat shock protein signature 388 407 7.3E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 SUPERFAMILY SSF53067 4 183 2.98E-67 T 29-03-2018 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.3E-293 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 SUPERFAMILY SSF100934 535 602 7.45E-5 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 SUPERFAMILY SSF53067 187 382 2.18E-68 T 29-03-2018 CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Gene3D G3DSA:1.20.1270.10 532 619 2.7E-17 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CPU03_RS04940 ae4b664e264d76945428850809a728ac 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 37.331 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 Gene3D G3DSA:2.140.10.30 229 427 3.6E-23 T 29-03-2018 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 Gene3D G3DSA:2.140.10.30 2 166 3.3E-5 T 29-03-2018 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 SUPERFAMILY SSF82171 244 259 8.83E-19 T 29-03-2018 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 SUPERFAMILY SSF82171 295 422 8.83E-19 T 29-03-2018 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 SUPERFAMILY SSF82171 21 167 8.83E-19 T 29-03-2018 CPU03_RS08230 a05f30204bb2947f8628bfdc818b3121 432 Pfam PF12566 Protein of unknown function (DUF3748) 69 188 1.1E-57 T 29-03-2018 IPR022223 Protein of unknown function DUF3748 CPU03_RS11725 45bbfb457a51b843ce30118284ba9991 455 Pfam PF05525 Branched-chain amino acid transport protein 8 443 2.1E-139 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CPU03_RS11725 45bbfb457a51b843ce30118284ba9991 455 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 432 7.8E-127 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CPU03_RS13070 aa8cf5853f4a0a891a54e50c2c190856 181 SMART SM00463 94 172 5.1E-19 T 29-03-2018 IPR002625 Smr domain CPU03_RS13070 aa8cf5853f4a0a891a54e50c2c190856 181 SUPERFAMILY SSF160443 94 170 2.22E-10 T 29-03-2018 IPR002625 Smr domain CPU03_RS13070 aa8cf5853f4a0a891a54e50c2c190856 181 Pfam PF01713 Smr domain 97 171 4.9E-18 T 29-03-2018 IPR002625 Smr domain CPU03_RS13070 aa8cf5853f4a0a891a54e50c2c190856 181 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.997 T 29-03-2018 IPR022990 Uncharacterised protein family UPF0115 CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 49.414 T 29-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 SMART SM00490 262 343 2.5E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 Pfam PF00271 Helicase conserved C-terminal domain 235 343 3.1E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.4E-44 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 SMART SM00487 23 225 1.2E-56 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 Gene3D G3DSA:3.40.50.300 227 447 1.0E-42 T 29-03-2018 CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 Gene3D G3DSA:3.40.50.300 1 226 1.5E-57 T 29-03-2018 CPU03_RS11715 75cd25d3dda8c7da193fe17f8c46f9b8 448 SUPERFAMILY SSF52540 76 357 7.36E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17180 90b35d3a08e2df5d55a221c477052227 101 PIRSF PIRSF003259 1 101 3.0E-50 T 29-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 CPU03_RS17180 90b35d3a08e2df5d55a221c477052227 101 Pfam PF07178 TraL protein 9 100 3.8E-32 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CPU03_RS17180 90b35d3a08e2df5d55a221c477052227 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 8 100 3.5E-21 T 29-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CPU03_RS08120 e4973ac0b4135ab113b176ffed64b1bf 278 Pfam PF00535 Glycosyl transferase family 2 27 155 5.0E-11 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS08120 e4973ac0b4135ab113b176ffed64b1bf 278 SUPERFAMILY SSF53448 39 194 9.34E-17 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS08120 e4973ac0b4135ab113b176ffed64b1bf 278 Gene3D G3DSA:3.90.550.10 19 263 1.9E-14 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 Pfam PF17384 RimP C-terminal SH3 domain 96 161 2.7E-21 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 17 161 24.119 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 Pfam PF02576 RimP N-terminal domain 23 93 3.9E-29 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 SUPERFAMILY SSF74942 94 161 8.37E-16 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 Gene3D G3DSA:3.30.300.70 10 90 3.3E-28 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 Gene3D G3DSA:2.30.30.180 98 158 1.1E-16 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CPU03_RS06025 92ea11a7ebf5a91a9d38e67c40f0b367 161 SUPERFAMILY SSF75420 12 93 2.22E-25 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CPU03_RS03455 9556a688297694e7a07162a58159c205 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 100 3.9E-19 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CPU03_RS03455 9556a688297694e7a07162a58159c205 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 2.9E-71 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 SUPERFAMILY SSF53927 4 146 2.13E-49 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 Gene3D G3DSA:3.40.140.10 1 125 2.9E-33 T 29-03-2018 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 Pfam PF01872 RibD C-terminal domain 148 361 3.5E-54 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 SUPERFAMILY SSF53597 145 365 1.21E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 Gene3D G3DSA:3.40.430.10 126 368 8.7E-63 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 363 1.6E-142 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CPU03_RS03455 9556a688297694e7a07162a58159c205 368 PIRSF PIRSF006769 2 368 3.1E-128 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 Pfam PF00762 Ferrochelatase 4 317 1.1E-110 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 Gene3D G3DSA:3.40.50.1400 1 172 6.4E-50 T 29-03-2018 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 Hamap MF_00323 Ferrochelatase [hemH]. 3 320 37.236 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 29-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 TIGRFAM TIGR00109 hemH: ferrochelatase 3 318 2.2E-106 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 Gene3D G3DSA:3.40.50.1400 173 300 5.3E-44 T 29-03-2018 CPU03_RS03180 1d78ca4e345d63b100a50ee0a4e139a2 325 SUPERFAMILY SSF53800 3 321 5.89E-102 T 29-03-2018 CPU03_RS01310 746c4612912979b77c73192567499071 270 Gene3D G3DSA:3.40.50.300 1 260 4.5E-57 T 29-03-2018 CPU03_RS01310 746c4612912979b77c73192567499071 270 SUPERFAMILY SSF52540 1 268 1.11E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01310 746c4612912979b77c73192567499071 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.4E-19 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CPU03_RS01310 746c4612912979b77c73192567499071 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 9.7E-110 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CPU03_RS01310 746c4612912979b77c73192567499071 270 PIRSF PIRSF003092 1 270 5.2E-99 T 29-03-2018 IPR025501 ATP binding protein MinD CPU03_RS07480 f12e98882b23077f7b201fa0edbec0a2 346 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 4 344 53.248 T 29-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 CPU03_RS07480 f12e98882b23077f7b201fa0edbec0a2 346 Gene3D G3DSA:3.30.1890.10 38 199 3.8E-48 T 29-03-2018 CPU03_RS07480 f12e98882b23077f7b201fa0edbec0a2 346 SUPERFAMILY SSF160355 50 315 1.57E-74 T 29-03-2018 CPU03_RS07480 f12e98882b23077f7b201fa0edbec0a2 346 Gene3D G3DSA:1.10.287.210 200 291 2.3E-19 T 29-03-2018 CPU03_RS07480 f12e98882b23077f7b201fa0edbec0a2 346 Pfam PF02706 Chain length determinant protein 11 86 1.7E-12 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.1E-259 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Pfam PF01225 Mur ligase family, catalytic domain 2 100 2.7E-18 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Gene3D G3DSA:3.40.50.720 1 90 5.9E-13 T 29-03-2018 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 3.6E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Pfam PF08245 Mur ligase middle domain 108 291 1.2E-18 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 SUPERFAMILY SSF51984 1 90 1.7E-23 T 29-03-2018 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.607 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 SUPERFAMILY SSF53244 312 449 9.94E-36 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Gene3D G3DSA:3.90.190.20 313 451 8.1E-27 T 29-03-2018 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 SUPERFAMILY SSF53623 95 308 8.9E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS06135 94b9b8b4e82ffed5d69b770d7604b251 456 Gene3D G3DSA:3.40.1190.10 91 312 7.1E-42 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.467 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 PIRSF PIRSF006246 1 125 4.3E-52 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 SUPERFAMILY SSF50692 1 116 3.23E-47 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-57 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.2E-48 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 Gene3D G3DSA:2.40.40.20 1 117 6.8E-52 T 29-03-2018 CPU03_RS04440 fa75794368c7268a94fb1123088e0e34 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 7.5E-59 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 194 408 2.3E-51 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 SMART SM00646 254 408 4.2E-65 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 SUPERFAMILY SSF53187 192 288 2.76E-53 T 29-03-2018 CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 SUPERFAMILY SSF53187 335 411 2.76E-53 T 29-03-2018 CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 Pfam PF11741 AMIN domain 39 142 1.2E-26 T 29-03-2018 IPR021731 AMIN domain CPU03_RS04300 944d67e1a11e612183f7822d4f9fb2aa 420 Gene3D G3DSA:3.40.630.40 189 416 5.7E-56 T 29-03-2018 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 SMART SM00411 3 92 1.1E-42 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 2.8E-54 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.4E-31 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 SUPERFAMILY SSF47729 3 93 8.83E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 Gene3D G3DSA:4.10.520.10 1 98 2.2E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS16780 ebad390c24184ea894f25d1abab9ce20 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.174 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CPU03_RS03265 2e7995e54903ec6dde0f9d4efc86317e 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 1.8E-32 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS03265 2e7995e54903ec6dde0f9d4efc86317e 67 Gene3D G3DSA:1.20.1280.40 1 66 6.7E-34 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS03265 2e7995e54903ec6dde0f9d4efc86317e 67 SUPERFAMILY SSF68989 1 67 5.23E-31 T 29-03-2018 IPR007985 Haemolysin expression modulating, HHA CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 Gene3D G3DSA:3.40.605.10 18 281 9.8E-93 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 Gene3D G3DSA:3.40.309.10 282 483 4.4E-65 T 29-03-2018 CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 Pfam PF00171 Aldehyde dehydrogenase family 35 495 2.5E-162 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS09965 ad2d61a6908f814aa092c6483fdd2501 509 SUPERFAMILY SSF53720 17 501 3.14E-161 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.7E-54 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 Gene3D G3DSA:3.30.420.140 2 140 7.8E-42 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 Pfam PF03652 Holliday junction resolvase 5 136 2.8E-42 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 SUPERFAMILY SSF53098 5 137 5.01E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.785 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CPU03_RS06605 7431d744467408b8b25e9224909d8cc6 140 SMART SM00732 4 104 7.9E-40 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 2.6E-49 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 SUPERFAMILY SSF48179 283 485 1.22E-64 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 Gene3D G3DSA:3.40.50.720 1 281 1.1E-108 T 29-03-2018 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 SUPERFAMILY SSF51735 3 281 2.56E-99 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 461 7.0E-96 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 Gene3D G3DSA:1.10.1040.10 282 489 1.6E-68 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 5.5E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 5.5E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 5.5E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CPU03_RS13745 da72749e0a6d519afea3142500ea63e8 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 5.5E-22 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CPU03_RS16720 eebbe39ad5d83eae201c2fade8ff033e 60 Gene3D G3DSA:2.10.70.10 24 60 2.4E-16 T 29-03-2018 CPU03_RS16720 eebbe39ad5d83eae201c2fade8ff033e 60 Pfam PF10636 Hemin uptake protein hemP 25 60 1.3E-16 T 29-03-2018 IPR019600 Hemin uptake protein HemP CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 SUPERFAMILY SSF52343 100 231 4.85E-36 T 29-03-2018 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.3E-22 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 SUPERFAMILY SSF63380 3 97 1.97E-19 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 Gene3D G3DSA:2.40.30.10 2 98 1.7E-14 T 29-03-2018 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 5.5E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 5.5E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 5.5E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 5.5E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 5.5E-13 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS07185 90882ecd59337e3d8fcee170d33f123d 233 Gene3D G3DSA:3.40.50.80 99 233 4.4E-24 T 29-03-2018 CPU03_RS01275 1a14ee92b6e8c49268126d675434c1b6 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 9.1E-277 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CPU03_RS01275 1a14ee92b6e8c49268126d675434c1b6 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 352.382 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CPU03_RS01275 1a14ee92b6e8c49268126d675434c1b6 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 508 6.1E-276 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CPU03_RS12800 efd867c669a96ab358b0dc81b296347c 146 Pfam PF03610 PTS system fructose IIA component 3 115 1.2E-28 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS12800 efd867c669a96ab358b0dc81b296347c 146 SUPERFAMILY SSF53062 1 131 1.44E-36 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS12800 efd867c669a96ab358b0dc81b296347c 146 Gene3D G3DSA:3.40.50.510 1 139 1.3E-34 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS14095 1ce6171eeedcfab57f8000e222f82b08 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 11 101 27.826 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CPU03_RS14095 1ce6171eeedcfab57f8000e222f82b08 106 Gene3D G3DSA:3.30.1390.10 13 105 1.1E-35 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CPU03_RS14095 1ce6171eeedcfab57f8000e222f82b08 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.6E-32 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CPU03_RS14095 1ce6171eeedcfab57f8000e222f82b08 106 SUPERFAMILY SSF54736 21 105 5.75E-32 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CPU03_RS14560 c57f1905106e4e41741a62843e4e312f 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 3.8E-19 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CPU03_RS03920 3c58707f9b3da49e48ca1aff518c8192 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.662 T 29-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CPU03_RS03920 3c58707f9b3da49e48ca1aff518c8192 152 SUPERFAMILY SSF53271 4 145 3.8E-32 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS03920 3c58707f9b3da49e48ca1aff518c8192 152 Gene3D G3DSA:3.40.50.2020 1 152 3.4E-28 T 29-03-2018 CPU03_RS03920 3c58707f9b3da49e48ca1aff518c8192 152 Pfam PF00156 Phosphoribosyl transferase domain 14 145 1.8E-16 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 Gene3D G3DSA:3.50.50.60 2 127 2.9E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.8E-75 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.7E-41 T 29-03-2018 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.7E-41 T 29-03-2018 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.7E-41 T 29-03-2018 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.7E-41 T 29-03-2018 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.7E-41 T 29-03-2018 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 SUPERFAMILY SSF51905 2 314 1.7E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 Gene3D G3DSA:3.50.50.60 185 314 2.1E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.7E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 Gene3D G3DSA:3.50.50.60 128 184 3.6E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14125 75038e15da307929c5ef8e0d7c562627 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 4.1E-123 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Pfam PF09106 Elongation factor SelB, winged helix 432 488 4.8E-15 T 29-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:3.40.50.300 1 168 3.5E-30 T 29-03-2018 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 SUPERFAMILY SSF50465 277 358 2.66E-6 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Pfam PF03144 Elongation factor Tu domain 2 189 256 3.7E-7 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:1.10.10.10 497 553 4.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:2.40.30.10 170 259 3.2E-18 T 29-03-2018 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:1.10.10.10 556 614 1.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:1.10.10.10 425 488 1.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Pfam PF09107 Elongation factor SelB, winged helix 571 613 8.5E-18 T 29-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 SUPERFAMILY SSF50447 175 294 7.66E-22 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Gene3D G3DSA:2.40.30.10 268 342 7.9E-7 T 29-03-2018 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 SUPERFAMILY SSF46785 564 615 1.48E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 SUPERFAMILY SSF46785 425 493 2.72E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 Pfam PF00009 Elongation factor Tu GTP binding domain 2 161 1.1E-26 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 615 6.2E-192 T 29-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CPU03_RS09970 d8fcf8e3cd1eb88d2661f5db8b08b8b1 625 SUPERFAMILY SSF52540 2 164 3.33E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 Gene3D G3DSA:3.30.70.260 8 97 1.4E-23 T 29-03-2018 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 Pfam PF13710 ACT domain 22 83 1.9E-14 T 29-03-2018 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 86 2.0E-35 T 29-03-2018 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 SUPERFAMILY SSF55021 89 172 3.15E-25 T 29-03-2018 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 11 169 3.9E-66 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 Gene3D G3DSA:3.30.70.1150 98 171 3.0E-24 T 29-03-2018 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 Pfam PF10369 Small subunit of acetolactate synthase 94 168 1.4E-22 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CPU03_RS04725 fdb2b0d2024099967fa90f4736c2130f 173 SUPERFAMILY SSF55021 12 84 3.75E-21 T 29-03-2018 CPU03_RS01815 d2c32cf1eec69f1ea5155984b5738dae 248 SUPERFAMILY SSF52172 22 151 2.96E-6 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS01815 d2c32cf1eec69f1ea5155984b5738dae 248 Gene3D G3DSA:3.40.50.2300 9 148 1.3E-5 T 29-03-2018 CPU03_RS01815 d2c32cf1eec69f1ea5155984b5738dae 248 Gene3D G3DSA:1.10.10.10 153 229 4.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01815 d2c32cf1eec69f1ea5155984b5738dae 248 SUPERFAMILY SSF46894 152 217 7.48E-8 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS01815 d2c32cf1eec69f1ea5155984b5738dae 248 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 216 2.3E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS09895 fa325df46021cee1a251e3fcbc749397 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.6E-43 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CPU03_RS09895 fa325df46021cee1a251e3fcbc749397 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.4E-40 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CPU03_RS09895 fa325df46021cee1a251e3fcbc749397 162 PIRSF PIRSF018472 1 162 5.5E-54 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 SUPERFAMILY SSF56024 11 191 6.28E-27 T 29-03-2018 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 SUPERFAMILY SSF56024 253 394 2.09E-19 T 29-03-2018 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 PIRSF PIRSF000850 1 452 2.1E-241 T 29-03-2018 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 Pfam PF13091 PLD-like domain 258 405 1.3E-20 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 Pfam PF00614 Phospholipase D Active site motif 136 160 5.6E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 SMART SM00155 134 160 0.0016 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 SMART SM00155 353 380 3.0E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 Gene3D G3DSA:3.30.870.10 18 227 6.5E-19 T 29-03-2018 CPU03_RS05045 94708a366f1f6e527e2670996ece3727 452 Gene3D G3DSA:3.30.870.10 228 421 4.8E-18 T 29-03-2018 CPU03_RS05195 b847c44685d521dc7af769ae20839431 217 Pfam PF01965 DJ-1/PfpI family 13 146 1.9E-6 T 29-03-2018 IPR002818 DJ-1/PfpI CPU03_RS05195 b847c44685d521dc7af769ae20839431 217 SUPERFAMILY SSF52317 1 215 1.23E-61 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS05195 b847c44685d521dc7af769ae20839431 217 PIRSF PIRSF006320 1 216 4.7E-100 T 29-03-2018 IPR026041 Glyoxalase ElbB CPU03_RS05195 b847c44685d521dc7af769ae20839431 217 Gene3D G3DSA:3.40.50.880 1 217 5.6E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 Gene3D G3DSA:1.10.3680.10 34 189 1.0E-25 T 29-03-2018 IPR029024 TerB-like CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 278 39.794 T 29-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 SUPERFAMILY SSF46565 132 275 5.75E-30 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 Pfam PF00226 DnaJ domain 216 275 4.5E-11 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 PRINTS PR00625 DnaJ domain signature 257 277 6.8E-8 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 PRINTS PR00625 DnaJ domain signature 233 248 6.8E-8 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 PRINTS PR00625 DnaJ domain signature 215 233 6.8E-8 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 Gene3D G3DSA:1.10.287.110 210 277 6.0E-16 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 Pfam PF05099 Tellurite resistance protein TerB 47 171 2.5E-9 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CPU03_RS04805 52436c79f19db1ae1bb2c86e8f0dd62d 279 SMART SM00271 212 277 6.8E-18 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 29-03-2018 IPR025505 FHIPEP conserved site CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 Pfam PF00771 FHIPEP family 31 681 7.5E-270 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.8E-56 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 PIRSF PIRSF005419 13 693 1.8E-244 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CPU03_RS02260 17a90bab9d67f7eccc5b9b0e870c964f 693 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.3E-279 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CPU03_RS15100 28489da816af6747b8243000b4435a31 442 Gene3D G3DSA:1.20.1250.20 238 428 6.2E-20 T 29-03-2018 CPU03_RS15100 28489da816af6747b8243000b4435a31 442 Gene3D G3DSA:1.20.1250.20 14 233 5.8E-17 T 29-03-2018 CPU03_RS15100 28489da816af6747b8243000b4435a31 442 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 21 424 1.2E-96 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CPU03_RS15100 28489da816af6747b8243000b4435a31 442 Pfam PF07690 Major Facilitator Superfamily 45 365 4.8E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15100 28489da816af6747b8243000b4435a31 442 SUPERFAMILY SSF103473 22 171 4.05E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15100 28489da816af6747b8243000b4435a31 442 SUPERFAMILY SSF103473 203 430 4.05E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 Gene3D G3DSA:3.40.190.10 192 275 7.2E-15 T 29-03-2018 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.6E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 SUPERFAMILY SSF46785 9 90 4.71E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 5.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 SUPERFAMILY SSF53850 100 299 6.92E-29 T 29-03-2018 CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 Gene3D G3DSA:1.10.10.10 6 93 3.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 Pfam PF03466 LysR substrate binding domain 98 299 1.3E-31 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS14940 a4f0e141490eaf00778d2c4c82b82ed2 309 Gene3D G3DSA:3.40.190.10 100 191 3.8E-18 T 29-03-2018 CPU03_RS05670 96b794e857a31a5704b8295245aa1fb6 383 Pfam PF10758 Protein of unknown function (DUF2586) 3 374 2.1E-162 T 29-03-2018 IPR019694 Bacteriophage HP1, Orf23 CPU03_RS05670 96b794e857a31a5704b8295245aa1fb6 383 Gene3D G3DSA:3.40.1260.10 5 100 0.0019 T 29-03-2018 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 Gene3D G3DSA:3.30.70.1530 60 123 6.5E-9 T 29-03-2018 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 Pfam PF01514 Secretory protein of YscJ/FliF family 39 228 6.6E-77 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 570 5.7E-171 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 Pfam PF08345 Flagellar M-ring protein C-terminal 260 452 1.6E-48 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PRINTS PR01009 Flagellar M-ring protein signature 161 175 6.5E-44 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PRINTS PR01009 Flagellar M-ring protein signature 204 222 6.5E-44 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PRINTS PR01009 Flagellar M-ring protein signature 273 291 6.5E-44 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PRINTS PR01009 Flagellar M-ring protein signature 380 404 6.5E-44 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PRINTS PR01009 Flagellar M-ring protein signature 129 147 6.5E-44 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS14425 323fdad60d413bb2da6da2098a7df3a4 573 PIRSF PIRSF004862 10 573 8.9E-168 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 SUPERFAMILY SSF55021 8 59 2.08E-8 T 29-03-2018 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.221 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 Pfam PF00551 Formyl transferase 88 264 6.9E-47 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 3.5E-124 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 Gene3D G3DSA:3.30.70.260 7 84 4.2E-7 T 29-03-2018 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 Gene3D G3DSA:3.40.50.170 85 278 1.1E-51 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.7E-65 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 SUPERFAMILY SSF53328 88 282 1.26E-58 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 Pfam PF01842 ACT domain 10 69 1.2E-7 T 29-03-2018 IPR002912 ACT domain CPU03_RS01085 cb05cff9cf8331028b7e2839e1cd2b04 282 PIRSF PIRSF036480 6 282 3.0E-110 T 29-03-2018 CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 Gene3D G3DSA:3.40.30.10 2 102 9.5E-23 T 29-03-2018 CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 SUPERFAMILY SSF52833 6 90 9.14E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 Gene3D G3DSA:1.20.1050.10 103 207 1.1E-10 T 29-03-2018 CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 SUPERFAMILY SSF47616 90 207 1.25E-6 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 83 3.6E-14 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CPU03_RS13220 3d890589b43d74a198ebf157d1d6ef92 213 Pfam PF14834 Glutathione S-transferase, C-terminal domain 97 209 2.4E-47 T 29-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CPU03_RS14915 ba5c428da506a0e648b0191e5ab0a022 440 Pfam PF02667 Short chain fatty acid transporter 1 440 1.1E-222 T 29-03-2018 IPR006160 Short chain fatty acid transporter AtoE CPU03_RS14915 ba5c428da506a0e648b0191e5ab0a022 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.2E-217 T 29-03-2018 IPR006161 Conserved hypothetical protein CHP00336 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 SUPERFAMILY SSF52540 268 484 4.02E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 SMART SM00382 29 226 1.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 SMART SM00382 277 472 3.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 Gene3D G3DSA:3.40.50.300 1 260 3.7E-54 T 29-03-2018 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 Gene3D G3DSA:3.40.50.300 261 491 1.4E-40 T 29-03-2018 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 Pfam PF00005 ABC transporter 269 423 5.0E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 Pfam PF00005 ABC transporter 21 169 8.0E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08015 98fd6804b4ba2938cb2cee16e278d3e2 501 SUPERFAMILY SSF52540 3 231 6.91E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:3.30.565.10 369 559 1.3E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SUPERFAMILY SSF55052 166 230 8.89E-20 T 29-03-2018 IPR015162 CheY binding CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Pfam PF09078 CheY binding 168 229 1.4E-23 T 29-03-2018 IPR015162 CheY binding CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SMART SM00387 411 551 1.8E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SUPERFAMILY SSF55874 369 549 1.44E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 304 366 7.7E-17 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:1.20.120.160 1 144 2.8E-35 T 29-03-2018 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SUPERFAMILY SSF47384 304 367 4.71E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:2.40.50.180 567 637 7.1E-12 T 29-03-2018 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:1.10.287.560 303 367 9.7E-20 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SUPERFAMILY SSF47226 4 124 1.88E-32 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SMART SM00073 3 100 6.0E-31 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 1.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 1.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 1.4E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Pfam PF01584 CheW-like domain 556 682 1.7E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SUPERFAMILY SSF50341 550 682 8.11E-31 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 550 3.4E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:2.30.30.40 638 682 3.1E-21 T 29-03-2018 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SMART SM01231 303 366 7.5E-21 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Gene3D G3DSA:3.30.70.400 165 230 1.8E-25 T 29-03-2018 IPR015162 CheY binding CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 Pfam PF01627 Hpt domain 7 103 5.9E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS01780 48ac29d4f245d5a88f5e4d1207d5f3f1 696 SMART SM00260 543 683 2.5E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 Gene3D G3DSA:3.30.160.160 5 49 5.8E-12 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 Gene3D G3DSA:3.30.160.160 52 99 5.4E-10 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 SUPERFAMILY SSF160113 63 109 3.92E-14 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 SUPERFAMILY SSF160113 4 59 2.88E-16 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 Pfam PF07411 Domain of unknown function (DUF1508) 13 58 7.7E-17 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03035 91b2b897fc2df5bd5905fbc0ad4cc9d1 112 Pfam PF07411 Domain of unknown function (DUF1508) 64 108 1.7E-17 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.3E-29 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 Pfam PF00886 Ribosomal protein S16 8 68 2.2E-23 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 29-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 SUPERFAMILY SSF54565 1 76 2.62E-28 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 Gene3D G3DSA:3.30.1320.10 1 79 8.0E-31 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11105 756b585748acd93d836c1c6baa01d1f0 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.206 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 94 111 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 136 5.3E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 Gene3D G3DSA:2.60.40.10 19 137 8.1E-37 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 SUPERFAMILY SSF49584 130 222 1.44E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 SUPERFAMILY SSF49354 15 136 2.41E-40 T 29-03-2018 IPR008962 PapD-like CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 Gene3D G3DSA:2.60.40.10 139 228 1.3E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 160 220 8.4E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 PRINTS PR00969 Pili chaperone signature 153 168 9.7E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 PRINTS PR00969 Pili chaperone signature 67 88 9.7E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 PRINTS PR00969 Pili chaperone signature 95 112 9.7E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 PRINTS PR00969 Pili chaperone signature 118 133 9.7E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS03165 1ed3dddfd8324f85ae84b56adbe98556 228 PRINTS PR00969 Pili chaperone signature 20 29 9.7E-31 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.749 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 Gene3D G3DSA:3.20.20.105 1 369 2.5E-157 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 1.7E-177 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.1E-93 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 7.6E-188 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS03480 e2d82d409b87191d4225d872648c9a26 378 SUPERFAMILY SSF51713 2 364 2.75E-163 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.0E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.0E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.0E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 Gene3D G3DSA:3.40.190.10 178 263 2.2E-22 T 29-03-2018 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 SUPERFAMILY SSF53850 93 296 2.33E-40 T 29-03-2018 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 Gene3D G3DSA:3.40.190.10 92 177 7.9E-17 T 29-03-2018 CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 Gene3D G3DSA:1.10.10.10 4 91 9.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 SUPERFAMILY SSF46785 3 87 2.09E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04260 046f89afcd1b669eb61ade95284b96f8 315 Pfam PF03466 LysR substrate binding domain 91 292 2.8E-39 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 Gene3D G3DSA:2.40.50.100 240 289 2.1E-8 T 29-03-2018 CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 SMART SM00382 29 236 1.4E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 Gene3D G3DSA:2.40.50.140 290 341 1.5E-10 T 29-03-2018 CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 SUPERFAMILY SSF52540 4 242 9.61E-85 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 Pfam PF08402 TOBE domain 278 348 1.2E-4 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 SUPERFAMILY SSF50331 238 357 1.21E-24 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 Gene3D G3DSA:3.40.50.300 2 239 1.1E-68 T 29-03-2018 CPU03_RS08995 26ac6d67657e3f27176322afc21b7497 364 Pfam PF00005 ABC transporter 21 162 3.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS16255 e0fe352d750b5a65920b802198cf853a 116 Pfam PF00462 Glutaredoxin 16 80 1.4E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CPU03_RS16255 e0fe352d750b5a65920b802198cf853a 116 Gene3D G3DSA:3.40.30.10 1 116 8.9E-32 T 29-03-2018 CPU03_RS16255 e0fe352d750b5a65920b802198cf853a 116 PIRSF PIRSF005894 1 107 1.6E-52 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CPU03_RS16255 e0fe352d750b5a65920b802198cf853a 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.7E-47 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related CPU03_RS16255 e0fe352d750b5a65920b802198cf853a 116 SUPERFAMILY SSF52833 2 104 4.99E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 Gene3D G3DSA:1.10.150.130 65 173 4.7E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 Gene3D G3DSA:3.30.160.60 1 56 2.2E-18 T 29-03-2018 CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 SUPERFAMILY SSF56349 69 337 2.5E-54 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 SUPERFAMILY SSF54171 11 55 7.85E-12 T 29-03-2018 IPR016177 DNA-binding domain GO:0003677 CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 Gene3D G3DSA:1.10.443.10 174 341 3.3E-22 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 Pfam PF00589 Phage integrase family 180 335 5.0E-19 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS00360 79ac804c738917e795eaf63b309b46f2 346 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 59 1.8E-15 T 29-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Gene3D G3DSA:3.40.190.10 112 196 2.0E-30 T 29-03-2018 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 SUPERFAMILY SSF55021 279 376 7.85E-23 T 29-03-2018 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 PIRSF PIRSF001500 1 379 4.5E-134 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Pfam PF01817 Chorismate mutase type II 11 89 3.0E-18 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 SUPERFAMILY SSF48600 6 93 3.11E-22 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Gene3D G3DSA:1.20.59.10 1 111 9.7E-30 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Pfam PF00800 Prephenate dehydratase 105 285 3.5E-60 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 4.5E-31 T 29-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 SUPERFAMILY SSF53850 104 290 9.88E-56 T 29-03-2018 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Gene3D G3DSA:3.30.70.260 293 380 1.3E-24 T 29-03-2018 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 Gene3D G3DSA:3.40.190.10 197 273 9.6E-24 T 29-03-2018 CPU03_RS11165 203d100fad2fc82b234e18388e6e4412 388 SMART SM00830 11 91 6.9E-25 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CPU03_RS13610 d0d74494236c858e6f7f6c7163a58f8b 149 Gene3D G3DSA:1.20.1290.10 11 148 2.1E-27 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS13610 d0d74494236c858e6f7f6c7163a58f8b 149 SUPERFAMILY SSF69118 5 139 4.32E-25 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS13610 d0d74494236c858e6f7f6c7163a58f8b 149 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 123 1.6E-13 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 SUPERFAMILY SSF52540 16 339 2.76E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Pfam PF04408 Helicase associated domain (HA2) 389 454 2.1E-12 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 810 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 SMART SM00487 2 186 6.6E-16 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 PIRSF PIRSF005496 1 811 0.0 T 29-03-2018 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 SMART SM00490 226 328 2.9E-17 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Gene3D G3DSA:3.40.50.300 180 349 4.2E-44 T 29-03-2018 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Pfam PF08482 ATP-dependent helicase C-terminal 667 799 3.0E-54 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Gene3D G3DSA:3.40.50.300 3 162 2.8E-22 T 29-03-2018 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 SMART SM00847 388 479 7.0E-12 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Pfam PF00270 DEAD/DEAH box helicase 19 160 9.4E-8 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS04385 4f45b7d29b287c4b8eb15af8bbf155cd 811 Pfam PF00271 Helicase conserved C-terminal domain 205 327 1.4E-12 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS16645 bdee4135ca096612ccc087b7c684775e 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 3.0E-27 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CPU03_RS16645 bdee4135ca096612ccc087b7c684775e 110 SUPERFAMILY SSF103481 6 106 1.01E-19 T 29-03-2018 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 104 8.8E-43 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 Pfam PF01491 Frataxin-like domain 1 101 1.3E-31 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 28.252 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 Gene3D G3DSA:3.30.920.10 1 108 1.0E-34 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 SMART SM01219 1 106 6.8E-58 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS07375 aebee0ac628178b7694979ac1052653c 108 SUPERFAMILY SSF55387 1 104 1.34E-39 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS03520 59a82f866f2069e546ad0e5f01be69ab 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 2.5E-156 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CPU03_RS03520 59a82f866f2069e546ad0e5f01be69ab 439 Pfam PF05525 Branched-chain amino acid transport protein 7 427 1.5E-152 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 567 3.6E-274 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Gene3D G3DSA:3.40.50.1220 194 355 2.2E-56 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 543 3.0E-48 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Gene3D G3DSA:3.40.50.970 356 563 1.4E-50 T 29-03-2018 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 1.2E-59 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 SUPERFAMILY SSF52518 3 180 2.27E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 6.1E-48 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 SUPERFAMILY SSF52467 189 362 1.49E-63 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 Gene3D G3DSA:3.40.50.970 1 193 5.1E-67 T 29-03-2018 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CPU03_RS04730 b0841f80ca7b02c06df30cf202514860 572 SUPERFAMILY SSF52518 368 568 1.23E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.829 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Gene3D G3DSA:1.10.10.10 1 64 1.9E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Pfam PF08279 HTH domain 9 58 1.1E-10 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Gene3D G3DSA:2.30.30.100 272 318 9.5E-16 T 29-03-2018 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 3.9E-25 T 29-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 SUPERFAMILY SSF46785 7 60 3.76E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.2E-24 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Gene3D G3DSA:3.30.930.10 65 270 8.8E-63 T 29-03-2018 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 SUPERFAMILY SSF50037 271 317 4.39E-11 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 4.4E-11 T 29-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.3E-75 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CPU03_RS07130 4b483d4915067bcb43c4f61d2c9657b5 319 SUPERFAMILY SSF55681 71 268 1.62E-58 T 29-03-2018 CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.1E-71 T 29-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 Gene3D G3DSA:1.10.150.240 15 85 6.5E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 4.0E-20 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 SUPERFAMILY SSF56784 2 222 5.61E-47 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 189 4.2E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 195 5.4E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS03575 7eb69b5e81c4bf41bbda67b1c63ecf54 224 Gene3D G3DSA:3.40.50.1000 86 224 2.6E-30 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 Gene3D G3DSA:3.90.1530.10 25 133 7.7E-19 T 29-03-2018 CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 Gene3D G3DSA:1.10.10.730 134 180 1.1E-8 T 29-03-2018 CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 SUPERFAMILY SSF110849 36 135 2.44E-14 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 SUPERFAMILY SSF109709 127 220 2.49E-18 T 29-03-2018 CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 SMART SM00470 37 133 1.3E-18 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS17230 8ac414ea59cd440a01dceed732104044 654 Pfam PF02195 ParB-like nuclease domain 37 132 1.8E-12 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS08800 93852a694b7e10027d979cac6367a70f 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 309 8.1E-37 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CPU03_RS08800 93852a694b7e10027d979cac6367a70f 317 Gene3D G3DSA:1.10.3470.10 15 316 2.5E-22 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 Gene3D G3DSA:1.20.58.180 216 294 2.4E-31 T 29-03-2018 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.552 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 Gene3D G3DSA:3.30.930.10 1 214 2.3E-87 T 29-03-2018 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 SUPERFAMILY SSF55681 8 292 7.06E-134 T 29-03-2018 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.0E-71 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.6E-176 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS08265 0f60da2dbaffbe59a2991fc9e07914dd 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 2.2E-149 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 Pfam PF13522 Glutamine amidotransferase domain 64 209 1.2E-15 T 29-03-2018 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 SUPERFAMILY SSF56235 2 259 8.23E-75 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.3E-161 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 PIRSF PIRSF000485 1 483 3.9E-170 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.986 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 Gene3D G3DSA:3.40.50.2020 280 446 4.1E-36 T 29-03-2018 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 SUPERFAMILY SSF53271 252 485 8.39E-72 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 Pfam PF00156 Phosphoribosyl transferase domain 285 394 3.9E-7 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS13190 e05572ef2bf02849c424d27bf2445b2c 505 Gene3D G3DSA:3.60.20.10 45 279 7.5E-57 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS02420 c235344b3908ced927ec5b4ba945d274 362 Gene3D G3DSA:3.90.25.10 202 361 1.9E-50 T 29-03-2018 CPU03_RS02420 c235344b3908ced927ec5b4ba945d274 362 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 331 6.4E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02420 c235344b3908ced927ec5b4ba945d274 362 Gene3D G3DSA:3.40.50.720 1 201 2.7E-35 T 29-03-2018 CPU03_RS02420 c235344b3908ced927ec5b4ba945d274 362 SUPERFAMILY SSF51735 2 357 2.18E-91 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02420 c235344b3908ced927ec5b4ba945d274 362 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 345 2.3E-153 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 3.8E-62 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.0 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 Gene3D G3DSA:3.50.30.40 1 159 6.4E-36 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 SUPERFAMILY SSF89562 2 158 6.02E-44 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 Pfam PF03737 Aldolase/RraA 5 152 2.3E-36 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CPU03_RS08480 ec68afbc1f8aba32e0c992a1db5bab2d 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 1.9E-88 T 29-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Gene3D G3DSA:3.40.50.10490 240 458 5.0E-60 T 29-03-2018 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Pfam PF13522 Glutamine amidotransferase domain 67 184 1.6E-21 T 29-03-2018 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 SUPERFAMILY SSF56235 2 232 8.58E-76 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 3.8E-262 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Gene3D G3DSA:3.40.50.10490 459 607 4.4E-51 T 29-03-2018 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 SUPERFAMILY SSF53697 245 609 3.8E-112 T 29-03-2018 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Pfam PF01380 SIS domain 462 591 2.3E-27 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Pfam PF01380 SIS domain 289 418 9.9E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Gene3D G3DSA:3.60.20.10 2 239 6.4E-68 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS08115 2193fc1dcc8a3832531b39cc5bf720f7 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.993 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 Gene3D G3DSA:2.60.40.10 140 256 2.1E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 Gene3D G3DSA:2.60.40.1080 257 346 4.8E-5 T 29-03-2018 CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 SUPERFAMILY SSF49373 145 245 9.42E-16 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 Pfam PF09134 Invasin, domain 3 143 247 1.8E-18 T 29-03-2018 IPR015217 Invasin, domain 3 CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 Gene3D G3DSA:3.10.100.10 347 448 5.3E-16 T 29-03-2018 IPR016186 C-type lectin-like/link domain CPU03_RS10200 d14b9e47be538236eab934858b009a1f 449 SUPERFAMILY SSF49373 256 338 2.35E-16 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 SMART SM01382 124 251 9.3E-89 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 PIRSF PIRSF002158 12 274 1.8E-100 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.0E-34 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Gene3D G3DSA:2.40.50.140 1 114 6.5E-49 T 29-03-2018 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Gene3D G3DSA:2.30.30.30 119 195 2.6E-31 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.4E-131 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 3.9E-55 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 SUPERFAMILY SSF50104 127 269 2.53E-59 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 SMART SM01383 42 118 1.9E-49 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 SUPERFAMILY SSF50249 2 125 1.89E-50 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.111 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09395 11f1665e92d17fe7170eb1c369133632 274 Gene3D G3DSA:4.10.950.10 197 272 3.3E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Gene3D G3DSA:2.40.40.20 853 1028 1.8E-25 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 SUPERFAMILY SSF50692 878 1003 4.29E-25 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Gene3D G3DSA:3.40.50.740 158 460 1.3E-19 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Pfam PF00384 Molybdopterin oxidoreductase 239 688 1.5E-15 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Gene3D G3DSA:3.40.50.740 461 792 3.7E-30 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 SUPERFAMILY SSF53706 75 111 4.23E-106 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 SUPERFAMILY SSF53706 138 897 4.23E-106 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 SMART SM00926 72 154 9.3E-10 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Gene3D G3DSA:2.20.25.90 74 154 2.7E-9 T 29-03-2018 CPU03_RS16125 29511e5cb555c063fc121ae115c01289 1028 Pfam PF01568 Molydopterin dinucleotide binding domain 904 983 1.1E-13 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS15740 6dcb8a7263fd2c61d02a75d6190ea745 128 SUPERFAMILY SSF88697 2 126 5.22E-43 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS15740 6dcb8a7263fd2c61d02a75d6190ea745 128 Gene3D G3DSA:3.10.400.10 1 128 1.0E-48 T 29-03-2018 CPU03_RS15740 6dcb8a7263fd2c61d02a75d6190ea745 128 SMART SM01022 9 126 8.4E-40 T 29-03-2018 IPR007374 ASCH domain CPU03_RS15740 6dcb8a7263fd2c61d02a75d6190ea745 128 Pfam PF04266 ASCH domain 19 126 4.9E-25 T 29-03-2018 IPR007374 ASCH domain CPU03_RS15740 6dcb8a7263fd2c61d02a75d6190ea745 128 PIRSF PIRSF021320 2 128 3.4E-42 T 29-03-2018 IPR009326 Protein of unknown function DUF984 CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 Pfam PF02335 Cytochrome c552 49 478 2.4E-171 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 SUPERFAMILY SSF48695 44 477 3.36E-158 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 Hamap MF_01182 Cytochrome c-552 [nrfA]. 4 483 56.265 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 Gene3D G3DSA:1.10.1130.10 47 349 4.4E-77 T 29-03-2018 CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 PIRSF PIRSF000243 3 484 4.9E-126 T 29-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CPU03_RS11390 56890e635b77706d5b6e1ad806e0030a 484 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 44 480 2.7E-235 T 29-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 55 138 2.9E-8 T 29-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Gene3D G3DSA:2.60.120.260 18 192 1.3E-31 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Gene3D G3DSA:2.60.40.10 625 724 0.0013 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 313 430 3.6E-6 T 29-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Gene3D G3DSA:2.60.40.10 195 301 8.5E-11 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Gene3D G3DSA:3.20.20.80 302 623 9.2E-56 T 29-03-2018 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 Pfam PF00703 Glycosyl hydrolases family 2 196 305 3.5E-8 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 SUPERFAMILY SSF51445 303 625 7.84E-66 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 SUPERFAMILY SSF49303 195 304 7.77E-16 T 29-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CPU03_RS15470 108bad48c01bc9d92749e8af72c66653 729 SUPERFAMILY SSF49785 19 190 5.95E-33 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 SUPERFAMILY SSF81606 200 406 3.92E-6 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 199 407 2.0E-39 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 Pfam PF00072 Response regulator receiver domain 12 123 2.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 Gene3D G3DSA:3.60.40.10 151 409 2.8E-34 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 Gene3D G3DSA:3.40.50.2300 10 150 2.2E-34 T 29-03-2018 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 SUPERFAMILY SSF52172 11 156 2.28E-37 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 SMART SM00448 10 123 3.6E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11970 ca1b2272ca8e92b474354651ee5c85d5 420 SMART SM00331 172 408 5.3E-19 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Gene3D G3DSA:3.40.190.10 129 223 1.8E-23 T 29-03-2018 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 SUPERFAMILY SSF53850 6 224 5.63E-69 T 29-03-2018 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.7E-55 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.527 T 29-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.3E-47 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 SUPERFAMILY SSF54913 226 298 1.33E-20 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 1.0E-30 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Gene3D G3DSA:3.40.190.10 1 128 9.1E-35 T 29-03-2018 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.3E-22 T 29-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CPU03_RS13820 600d6b48d0fdf95710d4f818cd0c1e82 299 Gene3D G3DSA:3.30.70.120 227 298 4.6E-23 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 SUPERFAMILY SSF55594 1 82 3.93E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 Gene3D G3DSA:3.30.1340.10 1 85 1.0E-32 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-30 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS02710 d977ab5f2355c9c00cdec2a368c5b33b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.1E-28 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 SUPERFAMILY SSF53383 5 381 1.21E-108 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 Gene3D G3DSA:3.40.640.10 54 273 3.1E-51 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 Pfam PF00155 Aminotransferase class I and II 41 378 1.6E-62 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.338 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 2.7E-138 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 Gene3D G3DSA:3.90.1150.10 274 382 5.5E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS12720 282843ba378bcd07fcb446c410d09071 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CPU03_RS01355 cc8d7fc116d95a55d7052f685df8cae6 128 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 128 29.643 T 29-03-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 CPU03_RS01355 cc8d7fc116d95a55d7052f685df8cae6 128 SUPERFAMILY SSF103481 5 104 3.27E-17 T 29-03-2018 CPU03_RS01355 cc8d7fc116d95a55d7052f685df8cae6 128 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.4E-24 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 Gene3D G3DSA:3.10.180.10 1 135 1.0E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 SUPERFAMILY SSF54593 1 127 1.05E-34 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.4E-24 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 7.2E-66 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CPU03_RS16270 a968051ca39da046ae46a4d8abaeedf9 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CPU03_RS08360 c673afdcc7269a6962c259bf268d36fd 450 Gene3D G3DSA:2.70.70.10 182 450 6.1E-35 T 29-03-2018 CPU03_RS08360 c673afdcc7269a6962c259bf268d36fd 450 Pfam PF01551 Peptidase family M23 351 444 7.5E-26 T 29-03-2018 IPR016047 Peptidase M23 CPU03_RS08360 c673afdcc7269a6962c259bf268d36fd 450 SUPERFAMILY SSF51261 263 448 7.46E-48 T 29-03-2018 IPR011055 Duplicated hybrid motif CPU03_RS08360 c673afdcc7269a6962c259bf268d36fd 450 Gene3D G3DSA:1.20.120.330 55 162 4.3E-7 T 29-03-2018 CPU03_RS02840 3e9252800c3c3652ff4d395f13cf66fe 95 PIRSF PIRSF037266 1 94 4.0E-37 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 CPU03_RS02840 3e9252800c3c3652ff4d395f13cf66fe 95 Pfam PF09904 Winged helix-turn helix 3 89 8.3E-39 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 CPU03_RS02840 3e9252800c3c3652ff4d395f13cf66fe 95 Gene3D G3DSA:1.10.10.10 4 95 2.3E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 SUPERFAMILY SSF54427 32 137 1.08E-35 T 29-03-2018 IPR032710 NTF2-like domain CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 7 136 26.267 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 SUPERFAMILY SSF103642 139 159 2.94E-7 T 29-03-2018 CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 Pfam PF02810 SEC-C motif 142 160 1.2E-8 T 29-03-2018 IPR004027 SEC-C motif CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 Pfam PF02810 SEC-C motif 9 25 6.1E-6 T 29-03-2018 IPR004027 SEC-C motif CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 Gene3D G3DSA:3.10.450.50 9 138 1.0E-40 T 29-03-2018 CPU03_RS01080 21ad291311599504fe5727c54d3106ea 160 Gene3D G3DSA:3.10.450.50 144 160 0.29 T 29-03-2018 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 Pfam PF02547 Queuosine biosynthesis protein 3 343 2.6E-131 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 SUPERFAMILY SSF111337 1 343 4.58E-136 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 Gene3D G3DSA:3.40.1780.10 175 344 1.3E-64 T 29-03-2018 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 Gene3D G3DSA:3.40.1780.10 1 126 3.3E-32 T 29-03-2018 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.8E-156 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CPU03_RS03485 7d9bac4f4a472936e4b5b3da9b4e87dc 357 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.791 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Pfam PF13247 4Fe-4S dicluster domain 84 181 9.0E-24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Pfam PF12798 4Fe-4S binding domain 46 57 0.13 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Gene3D G3DSA:3.30.70.20 26 49 2.5E-4 T 29-03-2018 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Gene3D G3DSA:3.30.70.20 145 220 4.8E-21 T 29-03-2018 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 SUPERFAMILY SSF54862 36 215 3.14E-61 T 29-03-2018 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Gene3D G3DSA:3.30.70.20 50 106 1.6E-16 T 29-03-2018 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 Gene3D G3DSA:3.30.70.20 107 144 8.9E-19 T 29-03-2018 CPU03_RS11400 17f879c704f01db878618a4cd85d8a05 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 1.1E-115 T 29-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 745 755 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 798 817 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 463 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 601 615 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 734 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 821 833 5.9E-24 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 798 814 5.4E-10 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 829 854 5.4E-10 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 770 786 5.4E-10 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 603 609 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF55008 3 70 1.96E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF81653 402 499 1.83E-23 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:3.30.70.100 71 142 1.5E-11 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:3.30.70.100 168 253 4.6E-21 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 ProSitePatterns PS01047 Heavy-metal-associated domain. 185 214 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF55008 71 136 4.06E-11 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:3.40.50.1000 725 864 1.9E-47 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Pfam PF00122 E1-E2 ATPase 400 580 1.0E-47 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:3.40.1110.10 618 724 1.8E-31 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 313 907 6.7E-185 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF56784 599 619 3.25E-59 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF56784 656 904 3.25E-59 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:3.30.70.100 1 70 3.8E-11 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Pfam PF00702 haloacid dehalogenase-like hydrolase 598 812 9.7E-46 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF55008 180 247 6.81E-19 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 ProSitePatterns PS01229 Hypothetical cof family signature 2. 798 820 - T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 332 907 1.6E-180 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Pfam PF00403 Heavy-metal-associated domain 75 129 3.6E-9 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Pfam PF00403 Heavy-metal-associated domain 7 63 1.8E-8 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Pfam PF00403 Heavy-metal-associated domain 185 239 1.2E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 877 8.0E-85 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 Gene3D G3DSA:1.20.1110.10 367 617 5.1E-42 T 29-03-2018 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF81665 500 595 3.4E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF81665 365 403 3.4E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS03125 b605c0cd9235f0b889749109fd8d4a4e 914 SUPERFAMILY SSF81665 847 866 3.4E-11 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CPU03_RS04365 c10a35b55bddc52c8a69b2cc0c7bc8b3 337 Gene3D G3DSA:3.40.630.10 23 336 3.6E-32 T 29-03-2018 CPU03_RS04365 c10a35b55bddc52c8a69b2cc0c7bc8b3 337 SUPERFAMILY SSF53187 37 248 3.14E-31 T 29-03-2018 CPU03_RS04365 c10a35b55bddc52c8a69b2cc0c7bc8b3 337 Pfam PF04389 Peptidase family M28 103 318 7.3E-20 T 29-03-2018 IPR007484 Peptidase M28 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 SUPERFAMILY SSF52540 366 556 2.85E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 SMART SM00382 394 574 1.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 Pfam PF06472 ABC transporter transmembrane region 2 7 297 6.9E-67 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 Gene3D G3DSA:1.20.1560.10 4 350 3.6E-45 T 29-03-2018 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 Gene3D G3DSA:3.40.50.300 351 558 9.5E-43 T 29-03-2018 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 Pfam PF00005 ABC transporter 386 522 2.9E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS01235 1e0e671b2b8c7b204ff0f5b549652eaf 591 SUPERFAMILY SSF90123 13 342 1.31E-28 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS06625 c84c10f78f1384366322c746910555f8 197 SUPERFAMILY SSF52972 1 195 1.54E-74 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS06625 c84c10f78f1384366322c746910555f8 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 9.8E-65 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CPU03_RS06625 c84c10f78f1384366322c746910555f8 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 49.895 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CPU03_RS06625 c84c10f78f1384366322c746910555f8 197 Gene3D G3DSA:3.90.950.10 1 197 2.8E-79 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS06625 c84c10f78f1384366322c746910555f8 197 Pfam PF01725 Ham1 family 4 192 1.2E-56 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Gene3D G3DSA:3.10.25.10 203 305 2.0E-22 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 SUPERFAMILY SSF51735 317 652 3.08E-71 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Pfam PF00551 Formyl transferase 53 176 5.3E-25 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 659 64.454 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 SUPERFAMILY SSF50486 205 304 7.06E-25 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Gene3D G3DSA:3.40.50.720 314 658 1.1E-46 T 29-03-2018 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 PIRSF PIRSF036506 1 659 0.0 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Gene3D G3DSA:3.40.50.170 1 202 4.0E-52 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.7E-44 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 Pfam PF02911 Formyl transferase, C-terminal domain 202 295 3.2E-18 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01970 726eee30c78d0dea25d1907cb448aa4c 659 SUPERFAMILY SSF53328 1 202 5.1E-59 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CPU03_RS01390 9ed88cb3b8c71f44e6899f651f037789 266 Pfam PF01925 Sulfite exporter TauE/SafE 10 260 1.6E-34 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.2E-91 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.205 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.5E-100 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 SUPERFAMILY SSF51366 1 265 3.3E-87 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 Gene3D G3DSA:3.20.20.70 2 268 1.0E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS00940 4c0ca3cc32be1928ba540a5d0f39c19f 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 Pfam PF04397 LytTr DNA-binding domain 143 235 8.3E-24 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 SMART SM00850 142 236 5.9E-25 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 SMART SM00448 2 112 4.1E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 SUPERFAMILY SSF52172 1 131 4.55E-30 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 Gene3D G3DSA:2.40.50.40 135 199 1.6E-6 T 29-03-2018 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 Gene3D G3DSA:2.20.25.10 201 236 2.0E-8 T 29-03-2018 CPU03_RS11150 b3f5bf909325fd075429c75b378aeada 238 Gene3D G3DSA:3.40.50.2300 1 134 1.0E-27 T 29-03-2018 CPU03_RS00025 358ee219377df2182141a2b0addc3beb 384 Gene3D G3DSA:3.40.50.150 106 373 5.8E-61 T 29-03-2018 CPU03_RS00025 358ee219377df2182141a2b0addc3beb 384 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 369 3.7E-102 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS00025 358ee219377df2182141a2b0addc3beb 384 PIRSF PIRSF003085 3 381 9.3E-126 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CPU03_RS00025 358ee219377df2182141a2b0addc3beb 384 SUPERFAMILY SSF53335 118 371 6.63E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08845 c5c488ef085064a3a79ab2423ea5d116 111 Pfam PF10625 Universal stress protein B (UspB) 1 105 4.9E-52 T 29-03-2018 IPR019598 Universal stress protein B CPU03_RS08845 c5c488ef085064a3a79ab2423ea5d116 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.151 T 29-03-2018 IPR019598 Universal stress protein B CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 45 371 4.6E-161 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 Pfam PF00005 ABC transporter 31 171 4.6E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 SUPERFAMILY SSF52540 15 253 5.32E-89 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 Gene3D G3DSA:3.40.50.300 10 267 1.5E-76 T 29-03-2018 CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 Pfam PF08402 TOBE domain 291 371 1.0E-7 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 SUPERFAMILY SSF50331 247 371 2.78E-7 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CPU03_RS00530 c78af75588eb6eab682bf848e44dc14a 377 SMART SM00382 39 222 2.4E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13840 15a6e7c5a9c83b3940b7309d01f5b832 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 41 181 1.1E-48 T 29-03-2018 IPR005247 YbhB/YbcL CPU03_RS13840 15a6e7c5a9c83b3940b7309d01f5b832 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 48 181 1.2E-36 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS13840 15a6e7c5a9c83b3940b7309d01f5b832 183 SUPERFAMILY SSF49777 23 181 3.92E-54 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS13840 15a6e7c5a9c83b3940b7309d01f5b832 183 Gene3D G3DSA:3.90.280.10 15 183 8.2E-53 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS05190 5fad8e582f5772682e710de33fd8a1e4 243 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 22 233 1.1E-77 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CPU03_RS05190 5fad8e582f5772682e710de33fd8a1e4 243 SUPERFAMILY SSF53955 56 233 3.66E-57 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS05190 5fad8e582f5772682e710de33fd8a1e4 243 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 10 235 41.602 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CPU03_RS05190 5fad8e582f5772682e710de33fd8a1e4 243 Pfam PF00912 Transglycosylase 63 229 3.9E-47 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS05190 5fad8e582f5772682e710de33fd8a1e4 243 Gene3D G3DSA:1.10.3810.10 47 236 1.0E-52 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 PIRSF PIRSF006755 4 231 2.2E-74 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 SUPERFAMILY SSF52540 7 217 9.3E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 9 179 2.5E-52 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 Gene3D G3DSA:3.40.50.300 3 223 1.6E-54 T 29-03-2018 CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 5 221 27.949 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CPU03_RS12730 0fd275711ae153280ff1a4130baaac83 242 Pfam PF13500 AAA domain 7 213 3.9E-35 T 29-03-2018 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 Gene3D G3DSA:3.40.50.1980 27 215 3.4E-43 T 29-03-2018 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 Gene3D G3DSA:3.40.50.1980 216 333 2.0E-22 T 29-03-2018 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 PRINTS PR00690 Adhesin family signature 27 45 5.7E-5 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 PRINTS PR00690 Adhesin family signature 71 88 5.7E-5 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 PRINTS PR00690 Adhesin family signature 58 71 5.7E-5 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 SUPERFAMILY SSF53807 28 333 3.78E-72 T 29-03-2018 CPU03_RS01405 c7c8f2be5d767060c08807fac44de715 335 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 327 3.6E-54 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 PIRSF PIRSF004505 1 155 9.4E-40 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 Gene3D G3DSA:3.40.1280.10 1 155 1.0E-48 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.627 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 SUPERFAMILY SSF75217 2 154 1.73E-48 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.3E-45 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS12215 2883919543fba74f9de67ceae519b839 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 7.0E-80 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS15225 1dbc2ac715585a6bc857e218a7240ac5 407 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 389 8.6E-12 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 355 528 4.7E-9 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 250 8.6E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 Gene3D G3DSA:1.10.3720.10 1 262 1.6E-32 T 29-03-2018 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 SUPERFAMILY SSF161098 2 261 1.15E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 Gene3D G3DSA:1.10.3720.10 313 534 1.6E-28 T 29-03-2018 CPU03_RS11530 b59689f9062334faa142c0c649fc1f78 537 SUPERFAMILY SSF161098 275 529 5.23E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS14990 bcf7e62ffdd6eac539454f2ba8b16711 255 SMART SM00382 28 216 3.4E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14990 bcf7e62ffdd6eac539454f2ba8b16711 255 Pfam PF00005 ABC transporter 19 167 5.0E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14990 bcf7e62ffdd6eac539454f2ba8b16711 255 Gene3D G3DSA:3.40.50.300 1 245 1.3E-54 T 29-03-2018 CPU03_RS14990 bcf7e62ffdd6eac539454f2ba8b16711 255 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14990 bcf7e62ffdd6eac539454f2ba8b16711 255 SUPERFAMILY SSF52540 3 230 1.01E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09200 6863db7d5167673a59db454537c41fbe 185 Pfam PF00293 NUDIX domain 48 159 7.6E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS09200 6863db7d5167673a59db454537c41fbe 185 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS09200 6863db7d5167673a59db454537c41fbe 185 SUPERFAMILY SSF55811 3 181 2.84E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS09200 6863db7d5167673a59db454537c41fbe 185 Gene3D G3DSA:3.90.79.10 8 185 1.0E-29 T 29-03-2018 CPU03_RS06645 d1453a6a10985929585fd620ed865a96 308 Gene3D G3DSA:3.40.710.10 1 308 1.9E-122 T 29-03-2018 CPU03_RS06645 d1453a6a10985929585fd620ed865a96 308 SUPERFAMILY SSF56601 7 308 3.94E-114 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS06645 d1453a6a10985929585fd620ed865a96 308 Pfam PF04960 Glutaminase 24 308 1.5E-111 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS06645 d1453a6a10985929585fd620ed865a96 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.952 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS06645 d1453a6a10985929585fd620ed865a96 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 4.2E-129 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 77 163 7.0E-5 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 202 299 7.4E-6 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 Gene3D G3DSA:3.30.420.10 154 350 7.0E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 3.4E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 3.4E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 3.4E-9 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 Gene3D G3DSA:3.90.1600.10 393 604 6.0E-49 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 SMART SM00486 151 558 3.5E-60 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 SUPERFAMILY SSF53098 5 392 7.17E-93 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 Pfam PF00136 DNA polymerase family B 377 736 4.4E-35 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS04790 99574832932bf3af908355840eb7ffcd 783 SUPERFAMILY SSF56672 388 777 1.45E-108 T 29-03-2018 CPU03_RS09460 e90bab1341f296d5ebd9955dabd59b97 117 Gene3D G3DSA:3.30.420.100 1 117 1.1E-39 T 29-03-2018 CPU03_RS09460 e90bab1341f296d5ebd9955dabd59b97 117 SUPERFAMILY SSF53137 3 115 1.77E-54 T 29-03-2018 CPU03_RS09460 e90bab1341f296d5ebd9955dabd59b97 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 5.4E-47 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09460 e90bab1341f296d5ebd9955dabd59b97 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.3E-44 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09460 e90bab1341f296d5ebd9955dabd59b97 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.443 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 SUPERFAMILY SSF52540 4 169 2.53E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 Gene3D G3DSA:3.40.50.300 1 172 6.4E-37 T 29-03-2018 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 Pfam PF01202 Shikimate kinase 13 169 1.2E-56 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.579 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.2E-29 T 29-03-2018 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.2E-29 T 29-03-2018 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.2E-29 T 29-03-2018 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.2E-29 T 29-03-2018 CPU03_RS09230 1db2013bc393d8e6fb8dffbbd8591472 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.2E-29 T 29-03-2018 CPU03_RS13285 17b1983d0dcd099307dc61c51a113f73 212 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 89 2.5E-9 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CPU03_RS13285 17b1983d0dcd099307dc61c51a113f73 212 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 SMART SM00357 5 69 1.7E-32 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.2E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 PRINTS PR00050 Cold shock protein signature 27 36 2.4E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 PRINTS PR00050 Cold shock protein signature 6 21 2.4E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 PRINTS PR00050 Cold shock protein signature 42 60 2.4E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 Gene3D G3DSA:2.40.50.140 4 69 9.4E-30 T 29-03-2018 CPU03_RS00815 029a596fecb17e9bd82ef83f605e23c3 69 PIRSF PIRSF002599 1 69 6.4E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 SUPERFAMILY SSF53613 14 262 8.42E-60 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 169 186 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 69 77 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 95 112 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 38 59 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 125 139 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 32 1.5E-39 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 19 261 2.4E-86 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 Gene3D G3DSA:3.40.1190.20 9 267 1.8E-54 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 PIRSF PIRSF000513 12 267 2.2E-93 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 19 263 31.472 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03070 2570114e2f4efd3cf781bb25ddc89213 267 Pfam PF02110 Hydroxyethylthiazole kinase family 19 260 2.3E-88 T 29-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS06390 5c9b3cae44fe23e66d8c801d2a563d76 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.4E-32 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CPU03_RS06390 5c9b3cae44fe23e66d8c801d2a563d76 105 SUPERFAMILY SSF103481 5 104 5.75E-22 T 29-03-2018 CPU03_RS17065 4f1ca751c4545848a3014f25bce6d823 241 Pfam PF05857 TraX protein 24 237 7.4E-39 T 29-03-2018 IPR008875 TraX CPU03_RS17065 4f1ca751c4545848a3014f25bce6d823 241 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 18 237 3.6E-68 T 29-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 Gene3D G3DSA:3.40.190.10 101 183 5.2E-11 T 29-03-2018 CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 Gene3D G3DSA:1.10.10.10 2 100 4.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 Gene3D G3DSA:3.40.190.10 184 277 1.8E-18 T 29-03-2018 CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 SUPERFAMILY SSF46785 17 123 1.48E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 Pfam PF03466 LysR substrate binding domain 99 307 9.6E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 307 1.4E-157 T 29-03-2018 IPR011781 D-serine deaminase transcriptional activator CPU03_RS14960 8e8f15da04e1cd1aa3f891f4784efd74 309 SUPERFAMILY SSF53850 101 308 3.8E-29 T 29-03-2018 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 1.3E-17 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 SUPERFAMILY SSF101353 256 461 9.68E-59 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Gene3D G3DSA:3.30.930.10 2 252 2.1E-115 T 29-03-2018 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Pfam PF02272 DHHA1 domain 733 871 1.1E-29 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 SUPERFAMILY SSF55681 4 255 2.41E-107 T 29-03-2018 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 3.0E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 3.0E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 3.0E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 3.0E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 3.0E-33 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 SMART SM00863 653 696 2.8E-21 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 SUPERFAMILY SSF55186 552 711 2.62E-51 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 204.535 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 SUPERFAMILY SSF50447 455 551 1.38E-18 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 1.4E-231 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CPU03_RS11035 62372f19324954d7fcdb7614d438f084 875 Gene3D G3DSA:3.30.980.10 553 713 7.6E-48 T 29-03-2018 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 29-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 30.036 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.5E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.5E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.5E-14 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 5.5E-55 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 3.9E-46 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 Gene3D G3DSA:1.20.5.220 114 133 0.0015 T 29-03-2018 CPU03_RS09525 c1741ca8c1554d08414564b26f64db08 138 SUPERFAMILY SSF81330 12 127 4.45E-36 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CPU03_RS01185 1b2806db1e09fba506f640c7edc2f4df 980 Pfam PF13954 PapC N-terminal domain 186 327 4.3E-37 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS01185 1b2806db1e09fba506f640c7edc2f4df 980 SUPERFAMILY SSF141729 208 319 1.26E-24 T 29-03-2018 CPU03_RS01185 1b2806db1e09fba506f640c7edc2f4df 980 Pfam PF00577 Outer membrane usher protein 342 889 2.4E-151 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS01185 1b2806db1e09fba506f640c7edc2f4df 980 Pfam PF13953 PapC C-terminal domain 905 961 4.4E-14 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 SUPERFAMILY SSF140490 335 427 4.45E-31 T 29-03-2018 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 425 9.8E-201 T 29-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 SUPERFAMILY SSF142984 250 332 1.83E-20 T 29-03-2018 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 Pfam PF10531 SLBB domain 255 297 1.7E-6 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 SUPERFAMILY SSF142019 13 243 2.09E-86 T 29-03-2018 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 351 362 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.3E-50 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 SMART SM00928 338 383 2.1E-20 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13325 577d274cfcfe185d187eb65d46bad44a 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 343 423 2.0E-26 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 SUPERFAMILY SSF50129 1 173 9.28E-55 T 29-03-2018 IPR011032 GroES-like CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 SMART SM00829 12 338 1.7E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.1E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.43 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 SUPERFAMILY SSF51735 141 305 6.53E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.8E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 Gene3D G3DSA:3.90.180.10 1 152 3.4E-47 T 29-03-2018 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.8E-177 T 29-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CPU03_RS07570 e07af08cf41c288f87bdfdb0f62e76e8 341 Gene3D G3DSA:3.40.50.10730 153 318 2.2E-27 T 29-03-2018 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 SUPERFAMILY SSF52980 10 228 9.12E-75 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 15 227 1.9E-102 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 SMART SM00927 60 158 4.4E-59 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 229 143.194 T 29-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 Pfam PF02976 DNA mismatch repair enzyme MutH 60 158 1.1E-31 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CPU03_RS10920 db624b9c6884d3f83b5788474b0494da 229 Gene3D G3DSA:3.40.600.10 7 229 8.3E-52 T 29-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CPU03_RS11680 2f1afde724e90c7b769f324d0dd45930 95 Pfam PF03658 RnfH family Ubiquitin 4 86 1.4E-34 T 29-03-2018 IPR005346 RnfH protein CPU03_RS11680 2f1afde724e90c7b769f324d0dd45930 95 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.804 T 29-03-2018 IPR005346 RnfH protein CPU03_RS11680 2f1afde724e90c7b769f324d0dd45930 95 Gene3D G3DSA:3.10.20.280 1 87 7.3E-35 T 29-03-2018 IPR005346 RnfH protein CPU03_RS11680 2f1afde724e90c7b769f324d0dd45930 95 SUPERFAMILY SSF54285 4 78 7.41E-27 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CPU03_RS02235 e4c5d02d216a82aa5cbc4fc5678338fe 137 Pfam PF00460 Flagella basal body rod protein 9 39 5.7E-12 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS02235 e4c5d02d216a82aa5cbc4fc5678338fe 137 PIRSF PIRSF002889 1 137 9.7E-43 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CPU03_RS02235 e4c5d02d216a82aa5cbc4fc5678338fe 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.5E-43 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CPU03_RS02235 e4c5d02d216a82aa5cbc4fc5678338fe 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.1E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 SUPERFAMILY SSF109635 10 110 2.09E-39 T 29-03-2018 CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.774 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 29-03-2018 CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 2.4E-52 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CPU03_RS04405 c342e1025edc95dd30c2bf7fe0885453 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 SUPERFAMILY SSF88697 2 69 2.73E-17 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 Gene3D G3DSA:3.40.1280.10 74 243 1.4E-52 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 SUPERFAMILY SSF75217 75 242 6.28E-48 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 Gene3D G3DSA:2.40.240.20 1 73 2.4E-22 T 29-03-2018 CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 8.7E-83 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 PIRSF PIRSF015601 2 242 7.8E-52 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS06590 91a8fe11ed7875c98a74555693e1fdba 243 Pfam PF04452 RNA methyltransferase 18 236 3.9E-70 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 SUPERFAMILY SSF52402 2 144 4.52E-27 T 29-03-2018 CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 PIRSF PIRSF006276 1 144 5.3E-19 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 Gene3D G3DSA:3.40.50.620 2 144 2.9E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 Pfam PF00582 Universal stress protein family 1 144 3.3E-22 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 PRINTS PR01438 Universal stress protein signature 122 144 1.4E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS00640 1e7ef2de97f833bfd700d12042322eb4 144 PRINTS PR01438 Universal stress protein signature 105 117 1.4E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 Gene3D G3DSA:3.30.2350.10 63 228 4.2E-37 T 29-03-2018 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 SMART SM00363 1 69 3.8E-5 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 Pfam PF01479 S4 domain 1 47 2.7E-5 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 SUPERFAMILY SSF55120 61 227 4.8E-46 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 SUPERFAMILY SSF55174 1 55 8.54E-10 T 29-03-2018 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 Gene3D G3DSA:3.10.290.10 1 62 9.9E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 2.3E-56 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS13650 f0c7edba82a67057d8b43bde5e2497db 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.3E-17 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 116 127 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Pfam PF04060 Putative Fe-S cluster 44 75 4.3E-14 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Pfam PF14697 4Fe-4S dicluster domain 109 162 1.5E-15 T 29-03-2018 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Gene3D G3DSA:3.30.70.20 147 181 4.2E-5 T 29-03-2018 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 184 41.927 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 SUPERFAMILY SSF54862 37 173 6.8E-28 T 29-03-2018 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Gene3D G3DSA:3.30.70.20 126 146 2.9E-11 T 29-03-2018 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 Gene3D G3DSA:3.30.70.20 24 125 2.2E-11 T 29-03-2018 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 PIRSF PIRSF005784 3 189 3.2E-81 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CPU03_RS16345 6fe0914ba471d7701180235daf6bfb38 191 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 189 1.0E-82 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CPU03_RS17205 44260538c02366123d98e636ad598dbb 157 Pfam PF01464 Transglycosylase SLT domain 22 137 1.3E-27 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS17205 44260538c02366123d98e636ad598dbb 157 Gene3D G3DSA:1.10.530.10 15 155 4.9E-23 T 29-03-2018 CPU03_RS17205 44260538c02366123d98e636ad598dbb 157 SUPERFAMILY SSF53955 21 144 1.45E-32 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 Pfam PF00005 ABC transporter 24 187 4.6E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 SUPERFAMILY SSF52540 3 263 2.01E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-21 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 SMART SM00382 32 237 4.1E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 Gene3D G3DSA:3.40.50.300 1 330 1.7E-60 T 29-03-2018 CPU03_RS00475 cc40fa1cd6494531d4ad115cdfe605e7 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.3E-17 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.0E-35 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.2E-76 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.54 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 SUPERFAMILY SSF52540 1 213 5.22E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 Gene3D G3DSA:3.40.50.300 1 214 3.6E-68 T 29-03-2018 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 6.4E-17 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CPU03_RS03185 e0fa74db0f75033ac8f76b110af44966 214 Pfam PF00406 Adenylate kinase 5 185 4.5E-60 T 29-03-2018 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 Gene3D G3DSA:3.30.70.120 1 108 3.3E-45 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 PIRSF PIRSF039144 1 112 1.7E-51 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 PRINTS PR00340 P-II protein signature 2 17 3.0E-40 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 PRINTS PR00340 P-II protein signature 52 75 3.0E-40 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 PRINTS PR00340 P-II protein signature 83 103 3.0E-40 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 PRINTS PR00340 P-II protein signature 23 41 3.0E-40 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 SUPERFAMILY SSF54913 1 112 1.56E-41 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-40 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03295 efd653981c63e86be5a5671b7fa74099 112 SMART SM00938 4 105 1.5E-61 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SUPERFAMILY SSF52172 828 952 2.56E-36 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SMART SM00387 583 694 3.0E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 3.7E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Gene3D G3DSA:1.10.287.130 475 530 2.5E-20 T 29-03-2018 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SUPERFAMILY SSF47384 455 537 2.94E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SUPERFAMILY SSF55874 525 693 1.28E-45 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SUPERFAMILY SSF52172 706 803 1.14E-21 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SMART SM00388 471 536 2.6E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 710 801 1.1E-23 T 29-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 4.9E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 3.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 3.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 3.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 3.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 947 26.041 T 29-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Gene3D G3DSA:3.30.450.20 378 474 4.2E-6 T 29-03-2018 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Pfam PF00072 Response regulator receiver domain 832 942 4.2E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Gene3D G3DSA:3.30.565.10 531 694 1.4E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 Gene3D G3DSA:3.40.50.2300 827 959 5.7E-39 T 29-03-2018 CPU03_RS13535 7fc2a1a40c55cd7131d14801df292a36 959 SMART SM00448 830 942 9.8E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 Gene3D G3DSA:3.40.50.150 3 179 6.1E-24 T 29-03-2018 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 2.8E-9 T 29-03-2018 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 2.8E-9 T 29-03-2018 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 149 2.8E-9 T 29-03-2018 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 2.8E-9 T 29-03-2018 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 Pfam PF05175 Methyltransferase small domain 49 158 6.3E-8 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CPU03_RS17250 9e8dcab3bcc14bbfd8f6ae7354b939ce 187 SUPERFAMILY SSF53335 32 186 6.96E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 Pfam PF00571 CBS domain 274 325 1.6E-6 T 29-03-2018 IPR000644 CBS domain CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 Pfam PF00571 CBS domain 206 261 1.1E-5 T 29-03-2018 IPR000644 CBS domain CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 PIRSF PIRSF004692 1 328 4.2E-134 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 Gene3D G3DSA:3.40.50.10490 11 202 1.3E-54 T 29-03-2018 CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 Gene3D G3DSA:3.10.580.10 203 326 3.4E-20 T 29-03-2018 CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 SUPERFAMILY SSF53697 14 325 1.4E-66 T 29-03-2018 CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 Pfam PF01380 SIS domain 45 177 5.0E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS05335 ccf4673c73855fb792f17d294338cd72 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 9.1E-123 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.484 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 Pfam PF02132 RecR protein 41 77 3.8E-14 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 SUPERFAMILY SSF111304 2 199 4.97E-72 T 29-03-2018 IPR023627 Recombination protein RecR CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 8.4E-81 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 Gene3D G3DSA:3.40.1360.10 78 171 3.1E-35 T 29-03-2018 CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 SMART SM00493 81 166 5.3E-17 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS03195 12adb706cbd7d33b9fb70d0ee4fb5c1a 201 Pfam PF13662 Toprim domain 82 172 1.9E-23 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS05510 23e15d335e6d6c6895b9a8ed097849ac 309 PIRSF PIRSF026649 6 309 1.3E-94 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS05510 23e15d335e6d6c6895b9a8ed097849ac 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 309 52.145 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CPU03_RS05510 23e15d335e6d6c6895b9a8ed097849ac 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 300 1.9E-107 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS05510 23e15d335e6d6c6895b9a8ed097849ac 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 309 4.4E-144 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CPU03_RS09935 4e588e1c2ce1f9110f60513f8d2f59ee 300 Gene3D G3DSA:1.20.1600.10 33 252 5.9E-18 T 29-03-2018 CPU03_RS09935 4e588e1c2ce1f9110f60513f8d2f59ee 300 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 232 1.1E-30 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CPU03_RS09935 4e588e1c2ce1f9110f60513f8d2f59ee 300 Pfam PF13533 Biotin-lipoyl like 40 86 4.6E-18 T 29-03-2018 CPU03_RS09935 4e588e1c2ce1f9110f60513f8d2f59ee 300 Pfam PF13437 HlyD family secretion protein 149 229 7.6E-9 T 29-03-2018 CPU03_RS09935 4e588e1c2ce1f9110f60513f8d2f59ee 300 SUPERFAMILY SSF111369 39 230 1.7E-20 T 29-03-2018 CPU03_RS00070 f886d47ddbab1b024d3c3347cd0478cc 288 Pfam PF01235 Sodium:alanine symporter family 58 252 5.7E-69 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00070 f886d47ddbab1b024d3c3347cd0478cc 288 PRINTS PR00175 Sodium/alanine symporter signature 214 233 1.1E-18 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00070 f886d47ddbab1b024d3c3347cd0478cc 288 PRINTS PR00175 Sodium/alanine symporter signature 95 117 1.1E-18 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00070 f886d47ddbab1b024d3c3347cd0478cc 288 PRINTS PR00175 Sodium/alanine symporter signature 186 204 1.1E-18 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS06740 958377e503c5d8a695258c2b89d7143d 361 Gene3D G3DSA:1.10.287.950 61 351 4.5E-26 T 29-03-2018 CPU03_RS06740 958377e503c5d8a695258c2b89d7143d 361 SUPERFAMILY SSF58104 59 243 5.23E-31 T 29-03-2018 CPU03_RS06740 958377e503c5d8a695258c2b89d7143d 361 Pfam PF13682 Chemoreceptor zinc-binding domain 253 317 1.9E-15 T 29-03-2018 IPR025991 Chemoreceptor zinc-binding domain CPU03_RS06740 958377e503c5d8a695258c2b89d7143d 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 108 241 5.0E-19 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 1.4E-81 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 Gene3D G3DSA:3.40.1450.10 79 301 6.9E-94 T 29-03-2018 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 SUPERFAMILY SSF64158 79 311 1.12E-84 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 PIRSF PIRSF001492 1 514 7.3E-204 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 SUPERFAMILY SSF53649 5 79 9.29E-74 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 SUPERFAMILY SSF53649 312 510 9.29E-74 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 50.34 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 Gene3D G3DSA:3.40.720.10 302 513 3.3E-36 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 Pfam PF01676 Metalloenzyme superfamily 6 500 2.0E-79 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CPU03_RS08365 7bc0eaf6bb5321ad1a94452d3747aa65 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 7.8E-237 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Pfam PF12800 4Fe-4S binding domain 10 22 0.12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 PRINTS PR00419 Adrenodoxin reductase family signature 342 364 1.9E-36 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 PRINTS PR00419 Adrenodoxin reductase family signature 484 498 1.9E-36 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 PRINTS PR00419 Adrenodoxin reductase family signature 518 531 1.9E-36 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 PRINTS PR00419 Adrenodoxin reductase family signature 407 417 1.9E-36 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 PRINTS PR00419 Adrenodoxin reductase family signature 365 378 1.9E-36 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.40.50.720 341 436 4.9E-17 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 217 326 5.4E-35 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:1.10.1060.10 192 340 8.9E-35 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.30.70.20 21 59 6.6E-7 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 203 666 3.3E-249 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 342 653 2.8E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.50.50.60 437 507 1.9E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.50.50.60 508 595 2.3E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.50.50.60 596 679 2.6E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 SUPERFAMILY SSF54862 1 165 2.51E-44 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 SUPERFAMILY SSF54862 209 309 2.51E-44 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Pfam PF13247 4Fe-4S dicluster domain 55 148 4.1E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.30.70.20 90 171 1.2E-14 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.30.70.20 1 20 0.13 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 Gene3D G3DSA:3.30.70.20 60 89 2.7E-11 T 29-03-2018 CPU03_RS16655 4ef831d8a08131c9f8f6057a15a4abc1 679 SUPERFAMILY SSF51971 340 595 2.12E-67 T 29-03-2018 CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 Gene3D G3DSA:3.30.420.40 206 398 9.8E-40 T 29-03-2018 CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 Pfam PF00480 ROK family 87 393 1.8E-51 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 SUPERFAMILY SSF46785 12 77 1.05E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 SUPERFAMILY SSF53067 86 395 1.75E-42 T 29-03-2018 CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 Gene3D G3DSA:1.10.10.10 11 80 1.2E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16410 3ae7802253bcde5c9d6db80c495ed504 407 Gene3D G3DSA:3.30.420.40 81 205 2.0E-15 T 29-03-2018 CPU03_RS13405 5a7b670e196e7c080137f8e9324871a6 165 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 29 164 7.0E-32 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CPU03_RS13405 5a7b670e196e7c080137f8e9324871a6 165 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 20 162 2.9E-44 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CPU03_RS13405 5a7b670e196e7c080137f8e9324871a6 165 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 25 161 2.8E-47 T 29-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 Gene3D G3DSA:3.40.50.300 142 361 4.7E-4 T 29-03-2018 CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 SUPERFAMILY SSF52821 98 151 4.8E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 SUPERFAMILY SSF52821 12 70 4.8E-21 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 Gene3D G3DSA:3.40.250.10 5 141 1.1E-17 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 21 352 5.4E-102 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 SMART SM00450 8 138 1.5E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS01125 561c4be4e1f2daa16607869461350eb8 370 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 7 367 49.947 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 SUPERFAMILY SSF56645 12 201 8.64E-27 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 Gene3D G3DSA:1.20.140.10 206 389 1.2E-16 T 29-03-2018 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 Gene3D G3DSA:2.40.110.10 110 202 8.4E-11 T 29-03-2018 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 Gene3D G3DSA:1.10.540.10 2 105 4.1E-9 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 367 5.8E-36 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 PIRSF PIRSF016578 1 389 6.4E-127 T 29-03-2018 CPU03_RS15340 f31a5d94ad572b71df7e3805bb8706d7 389 SUPERFAMILY SSF47203 231 381 1.48E-12 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CPU03_RS05975 b88d2820988baa3583bb4920139a8c69 437 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 13 434 34.786 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CPU03_RS05975 b88d2820988baa3583bb4920139a8c69 437 PIRSF PIRSF006054 11 436 9.8E-161 T 29-03-2018 IPR021144 Uncharacterised protein family UPF0597 CPU03_RS05975 b88d2820988baa3583bb4920139a8c69 437 Pfam PF03313 Serine dehydratase alpha chain 178 429 8.0E-46 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CPU03_RS07260 e2f53a9b060211c102e23e8f1ea9011a 255 SUPERFAMILY SSF53167 6 250 4.84E-72 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS07260 e2f53a9b060211c102e23e8f1ea9011a 255 Pfam PF01048 Phosphorylase superfamily 21 250 1.8E-38 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS07260 e2f53a9b060211c102e23e8f1ea9011a 255 Gene3D G3DSA:3.40.50.1580 16 252 2.1E-54 T 29-03-2018 CPU03_RS07260 e2f53a9b060211c102e23e8f1ea9011a 255 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS07260 e2f53a9b060211c102e23e8f1ea9011a 255 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.0E-124 T 29-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 SUPERFAMILY SSF47240 17 169 1.11E-43 T 29-03-2018 IPR009078 Ferritin-like superfamily CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 77 93 1.2E-7 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 149 167 1.2E-7 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 53 69 1.2E-7 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 Pfam PF00210 Ferritin-like domain 33 167 1.0E-25 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 Gene3D G3DSA:1.20.1260.10 4 173 6.6E-40 T 29-03-2018 IPR012347 Ferritin-related CPU03_RS11560 e0f06fb82c97b6c89ae56feff346a121 174 PIRSF PIRSF005900 10 174 2.6E-47 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CPU03_RS06825 14bb7b56a6efd37012aff6a60751ae61 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 87 1.4E-28 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CPU03_RS06825 14bb7b56a6efd37012aff6a60751ae61 99 PIRSF PIRSF002736 1 98 8.9E-37 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CPU03_RS06825 14bb7b56a6efd37012aff6a60751ae61 99 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 95 1.6E-29 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CPU03_RS06825 14bb7b56a6efd37012aff6a60751ae61 99 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 98 25.538 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CPU03_RS06825 14bb7b56a6efd37012aff6a60751ae61 99 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 75 1.0E-25 T 29-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 SUPERFAMILY SSF53822 69 324 1.52E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 SMART SM00354 12 82 1.4E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 29-03-2018 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 SUPERFAMILY SSF47413 12 70 5.53E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Gene3D G3DSA:1.10.260.40 26 69 5.0E-18 T 29-03-2018 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Pfam PF13377 Periplasmic binding protein-like domain 179 343 2.8E-21 T 29-03-2018 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Gene3D G3DSA:1.10.10.60 3 25 0.001 T 29-03-2018 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Gene3D G3DSA:3.40.50.2300 70 186 4.5E-24 T 29-03-2018 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.5E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10240 89dc4c79dea6c71c203e4506ac11b267 344 Gene3D G3DSA:3.40.50.2300 187 317 3.4E-26 T 29-03-2018 CPU03_RS15435 7573ae75912be2b3b950a5e66c246464 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 277 7.2E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15435 7573ae75912be2b3b950a5e66c246464 289 Gene3D G3DSA:1.10.3720.10 16 288 1.1E-43 T 29-03-2018 CPU03_RS15435 7573ae75912be2b3b950a5e66c246464 289 TIGRFAM TIGR03226 PhnU: 2-aminoethylphosphonate ABC transporter, permease protein 8 286 3.5E-124 T 29-03-2018 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU GO:0016020|GO:0033223 CPU03_RS15435 7573ae75912be2b3b950a5e66c246464 289 SUPERFAMILY SSF161098 16 277 5.78E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13485 252fb0cfae19bce7b38f8a8adcdabbfc 80 SUPERFAMILY SSF54285 1 80 6.92E-22 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CPU03_RS13485 252fb0cfae19bce7b38f8a8adcdabbfc 80 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 80 3.7E-21 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CPU03_RS13485 252fb0cfae19bce7b38f8a8adcdabbfc 80 Pfam PF02597 ThiS family 4 80 3.4E-20 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CPU03_RS13485 252fb0cfae19bce7b38f8a8adcdabbfc 80 Gene3D G3DSA:3.10.20.30 1 80 3.4E-20 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS00160 fa685475889b4fd09052bc958091022e 191 Pfam PF06763 Prophage minor tail protein Z (GPZ) 12 190 2.5E-15 T 29-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 Gene3D G3DSA:3.40.980.10 1 188 5.5E-41 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 2.4E-28 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 SUPERFAMILY SSF53218 3 188 2.49E-46 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 1.4E-39 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 SMART SM00852 7 153 4.4E-24 T 29-03-2018 IPR001453 MoaB/Mog domain CPU03_RS04955 f00573eac1e3f5a1a949ba49ab8bee95 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF82697 2 151 2.98E-51 T 29-03-2018 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF56042 825 1033 9.72E-54 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF55326 620 816 2.33E-67 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF52317 1037 1294 2.29E-97 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.90.650.10 822 995 6.8E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.90.650.10 426 611 1.7E-32 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF109736 155 220 1.96E-21 T 29-03-2018 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.30.1330.10 618 813 3.5E-20 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.30.1330.10 183 217 0.0028 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.30.1330.10 218 425 4.6E-52 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF55326 221 428 1.43E-62 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 837 967 6.4E-12 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 1.2E-29 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SMART SM01211 1040 1295 5.8E-157 T 29-03-2018 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Gene3D G3DSA:3.40.50.880 1039 1295 1.6E-30 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1296 21.282 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1294 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 3.9E-104 T 29-03-2018 CPU03_RS04010 462d9c6e4bb7ac98eba35a81504e26ed 1296 SUPERFAMILY SSF56042 432 615 4.93E-54 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 SUPERFAMILY SSF50465 298 393 2.48E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 394 7.1E-239 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.9E-59 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Gene3D G3DSA:2.40.30.10 206 299 2.6E-32 T 29-03-2018 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.438 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 SUPERFAMILY SSF50447 205 301 3.53E-31 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Gene3D G3DSA:3.40.50.300 2 74 5.0E-11 T 29-03-2018 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 SUPERFAMILY SSF52540 6 219 3.38E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.0E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Gene3D G3DSA:2.40.30.10 300 393 5.8E-34 T 29-03-2018 CPU03_RS09370 9bf73ed0c93ac1e1212ba97962e8111e 394 Gene3D G3DSA:3.40.50.300 75 203 2.4E-32 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 SUPERFAMILY SSF56024 316 498 7.85E-57 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Pfam PF02503 Polyphosphate kinase middle domain 120 320 5.7E-41 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Gene3D G3DSA:3.30.870.10 318 500 9.0E-24 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 6 678 1.8E-258 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Gene3D G3DSA:3.30.870.10 501 687 3.1E-34 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 SUPERFAMILY SSF140356 3 106 2.88E-34 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Gene3D G3DSA:1.20.58.310 9 109 1.1E-34 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 SUPERFAMILY SSF56024 502 681 2.06E-68 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 SUPERFAMILY SSF143724 108 313 8.44E-59 T 29-03-2018 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Gene3D G3DSA:3.30.1840.10 110 308 1.9E-51 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 110 1.9E-32 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 682 27.231 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 677 1.3E-144 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CPU03_RS02950 ecb97750c23b9c40dd643d2dea9f16ac 701 PIRSF PIRSF015589 1 694 3.4E-245 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CPU03_RS09805 b7975a786dd20be6c1a2b9ec6cab5c88 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 4.1E-50 T 29-03-2018 IPR018994 Protein of unknown function DUF2002 CPU03_RS09805 b7975a786dd20be6c1a2b9ec6cab5c88 111 SUPERFAMILY SSF159894 1 111 6.54E-50 T 29-03-2018 CPU03_RS00675 5f5761957f0923f5a7eccf32802dac65 264 Gene3D G3DSA:3.40.50.300 4 252 1.2E-44 T 29-03-2018 CPU03_RS00675 5f5761957f0923f5a7eccf32802dac65 264 SUPERFAMILY SSF52540 23 234 1.49E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00675 5f5761957f0923f5a7eccf32802dac65 264 Pfam PF00005 ABC transporter 26 175 1.4E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS00675 5f5761957f0923f5a7eccf32802dac65 264 SMART SM00382 35 223 8.7E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 63 72 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.4E-42 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 Gene3D G3DSA:3.40.630.10 4 282 1.4E-64 T 29-03-2018 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 Gene3D G3DSA:3.40.630.10 308 375 2.5E-4 T 29-03-2018 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.7E-169 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 SUPERFAMILY SSF55031 181 290 3.89E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 138 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.0E-23 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.389 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 SUPERFAMILY SSF53187 6 180 2.31E-67 T 29-03-2018 CPU03_RS02855 fd3717fcd98532d3f07a0129e96b87b4 377 SUPERFAMILY SSF53187 294 376 2.31E-67 T 29-03-2018 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.1E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.333 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.5E-101 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 SMART SM00322 60 125 4.8E-7 T 29-03-2018 IPR004087 K Homology domain GO:0003676 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 Pfam PF07650 KH domain 38 111 3.6E-19 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 Gene3D G3DSA:3.30.300.20 17 107 5.9E-28 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 SUPERFAMILY SSF54814 2 106 2.28E-37 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 29-03-2018 CPU03_RS09410 9b182d84e51561a9fda2ae155dbdb5d9 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Gene3D G3DSA:3.10.560.10 247 338 9.9E-17 T 29-03-2018 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Gene3D G3DSA:3.10.560.10 157 246 4.1E-26 T 29-03-2018 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Gene3D G3DSA:1.20.5.70 339 368 1.6E-14 T 29-03-2018 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Pfam PF02563 Polysaccharide biosynthesis/export protein 78 161 1.3E-25 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Gene3D G3DSA:3.30.1950.10 85 156 2.2E-24 T 29-03-2018 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Pfam PF10531 SLBB domain 168 216 3.2E-11 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS14530 a753e23849060710a60b79638918e311 371 Pfam PF10531 SLBB domain 252 301 0.0024 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS08290 59ff3fd23edc7396c33e76657a15eb9f 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 29-03-2018 IPR001455 TusA-like domain CPU03_RS08290 59ff3fd23edc7396c33e76657a15eb9f 82 Pfam PF01206 Sulfurtransferase TusA 10 79 2.3E-25 T 29-03-2018 IPR001455 TusA-like domain CPU03_RS08290 59ff3fd23edc7396c33e76657a15eb9f 82 SUPERFAMILY SSF64307 6 80 1.15E-26 T 29-03-2018 IPR001455 TusA-like domain CPU03_RS08290 59ff3fd23edc7396c33e76657a15eb9f 82 Gene3D G3DSA:3.30.110.40 5 81 7.3E-29 T 29-03-2018 IPR001455 TusA-like domain CPU03_RS08290 59ff3fd23edc7396c33e76657a15eb9f 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.934 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CPU03_RS03355 3e14a08b464fc398b2392e7a4da7a5d0 108 SUPERFAMILY SSF82657 1 88 2.62E-30 T 29-03-2018 IPR002634 BolA protein CPU03_RS03355 3e14a08b464fc398b2392e7a4da7a5d0 108 Pfam PF01722 BolA-like protein 10 83 5.6E-30 T 29-03-2018 IPR002634 BolA protein CPU03_RS03355 3e14a08b464fc398b2392e7a4da7a5d0 108 PIRSF PIRSF003113 1 99 3.2E-32 T 29-03-2018 IPR002634 BolA protein CPU03_RS03355 3e14a08b464fc398b2392e7a4da7a5d0 108 Gene3D G3DSA:3.30.300.90 1 86 6.8E-29 T 29-03-2018 CPU03_RS10025 61a998d4a9d205f8d1736ce4807a94f2 167 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 5.8E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS10025 61a998d4a9d205f8d1736ce4807a94f2 167 SUPERFAMILY SSF55729 3 150 4.8E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS10025 61a998d4a9d205f8d1736ce4807a94f2 167 Gene3D G3DSA:3.40.630.30 1 162 3.4E-29 T 29-03-2018 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 286 1.2E-88 T 29-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 SUPERFAMILY SSF53927 1 148 6.9E-42 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 Gene3D G3DSA:3.40.140.10 185 295 4.9E-13 T 29-03-2018 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 SUPERFAMILY SSF53927 152 292 5.64E-35 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 Gene3D G3DSA:3.40.140.10 40 171 1.2E-29 T 29-03-2018 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 63 140 2.7E-14 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 279 2.2E-43 T 29-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 294 49.05 T 29-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CPU03_RS02530 7e047c2606a721e2551a43ee8ac1798a 295 PIRSF PIRSF006334 14 295 2.0E-107 T 29-03-2018 CPU03_RS01630 29ab83d5e5a10cc6d0a05e17837359b3 378 Gene3D G3DSA:2.60.120.600 50 221 4.4E-7 T 29-03-2018 IPR010621 Domain of unknown function DUF1214 CPU03_RS01630 29ab83d5e5a10cc6d0a05e17837359b3 378 Gene3D G3DSA:2.60.120.600 249 368 8.8E-5 T 29-03-2018 IPR010621 Domain of unknown function DUF1214 CPU03_RS01630 29ab83d5e5a10cc6d0a05e17837359b3 378 Pfam PF06742 Protein of unknown function (DUF1214) 256 360 4.0E-10 T 29-03-2018 IPR010621 Domain of unknown function DUF1214 CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 Gene3D G3DSA:1.10.10.370 40 108 1.3E-33 T 29-03-2018 CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 1.4E-51 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 PIRSF PIRSF006223 2 109 3.0E-47 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 Gene3D G3DSA:3.30.1420.10 2 39 8.3E-18 T 29-03-2018 CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 Pfam PF04358 DsrC like protein 3 109 1.2E-47 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CPU03_RS02010 1df8f3621612fa566e7541f5ae089793 109 SUPERFAMILY SSF69721 2 109 4.84E-43 T 29-03-2018 IPR025526 DsrC-like domain CPU03_RS05320 f55f85abf569282693c59a1447a76e9c 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 258 9.6E-102 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CPU03_RS05320 f55f85abf569282693c59a1447a76e9c 260 Pfam PF02405 Permease MlaE 46 256 1.4E-73 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CPU03_RS13990 7512792e3cb635d37e9117a885e101c8 173 SUPERFAMILY SSF49401 30 172 5.97E-15 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS13990 7512792e3cb635d37e9117a885e101c8 173 Gene3D G3DSA:2.60.40.1090 28 172 2.5E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 95 4.8E-29 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 2.9E-18 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 Gene3D G3DSA:3.30.70.140 5 97 3.2E-33 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 SUPERFAMILY SSF57825 101 152 8.76E-15 T 29-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 Gene3D G3DSA:2.30.30.20 102 150 3.4E-17 T 29-03-2018 CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 151 1.8E-63 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 SUPERFAMILY SSF54893 2 100 1.83E-34 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 31.474 T 29-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CPU03_RS09950 01efad35cb925c505f0ce9a067f1280a 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 94 7.0E-31 T 29-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CPU03_RS03790 85ee0f6c72ff24af463f5d6657cb3708 185 SUPERFAMILY SSF46894 95 164 1.33E-9 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS03790 85ee0f6c72ff24af463f5d6657cb3708 185 Gene3D G3DSA:1.10.10.10 14 156 7.4E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03790 85ee0f6c72ff24af463f5d6657cb3708 185 Pfam PF00196 Bacterial regulatory proteins, luxR family 104 157 4.6E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS03790 85ee0f6c72ff24af463f5d6657cb3708 185 SMART SM00421 102 159 8.8E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 532 551 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 316 337 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 101 122 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 722 742 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 235 258 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 193 214 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 399 420 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 PRINTS PR01440 Cellulose synthase subunit B signature 569 589 5.4E-36 T 29-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CPU03_RS08695 04e82a3989835e391138c4cf6b98752c 783 Pfam PF03170 Bacterial cellulose synthase subunit 75 683 2.1E-206 T 29-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 SUPERFAMILY SSF55021 336 423 6.18E-28 T 29-03-2018 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Gene3D G3DSA:3.40.50.1100 37 148 1.4E-33 T 29-03-2018 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 7.3E-25 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.3E-27 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 SUPERFAMILY SSF55021 420 512 5.49E-24 T 29-03-2018 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 3.3E-77 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 3.3E-259 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 SUPERFAMILY SSF53686 15 365 8.77E-100 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Gene3D G3DSA:3.40.1020.10 338 513 1.4E-70 T 29-03-2018 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CPU03_RS07530 0766db5e2122f1b5196a5084567c8b75 514 Gene3D G3DSA:3.40.50.1100 149 329 5.9E-46 T 29-03-2018 CPU03_RS10225 c0a06b5e34653469386d7f071ca5b05e 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 1.5E-148 T 29-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CPU03_RS17170 d45c6542594f6f137942cd5380142c65 243 Pfam PF06586 TraK protein 22 222 5.9E-43 T 29-03-2018 IPR010563 Pilus assembly TraK CPU03_RS17170 d45c6542594f6f137942cd5380142c65 243 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 14 236 1.6E-59 T 29-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK CPU03_RS03175 ac419f527252d869920cad59ff244cee 433 SUPERFAMILY SSF53613 34 304 1.31E-44 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03175 ac419f527252d869920cad59ff244cee 433 SUPERFAMILY SSF53613 337 415 1.31E-44 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03175 ac419f527252d869920cad59ff244cee 433 Pfam PF00294 pfkB family carbohydrate kinase 145 293 2.2E-8 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS03175 ac419f527252d869920cad59ff244cee 433 Gene3D G3DSA:3.40.1190.20 31 430 4.3E-44 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03970 c06a4a6436a8eaa2776eebcb0e3b51f2 240 SUPERFAMILY SSF141523 40 157 8.11E-13 T 29-03-2018 CPU03_RS03970 c06a4a6436a8eaa2776eebcb0e3b51f2 240 Gene3D G3DSA:2.40.440.10 42 161 3.8E-10 T 29-03-2018 CPU03_RS03970 c06a4a6436a8eaa2776eebcb0e3b51f2 240 Pfam PF03734 L,D-transpeptidase catalytic domain 43 159 2.2E-9 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CPU03_RS10980 2e027fa6a0ecd6ce54873896906ead7b 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 190 1.7E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS10980 2e027fa6a0ecd6ce54873896906ead7b 218 Gene3D G3DSA:1.10.10.10 48 202 6.8E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10980 2e027fa6a0ecd6ce54873896906ead7b 218 SUPERFAMILY SSF46894 138 196 5.44E-10 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS10980 2e027fa6a0ecd6ce54873896906ead7b 218 SMART SM00421 142 199 1.2E-4 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 486 37.862 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 SUPERFAMILY SSF48179 210 370 4.59E-38 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 358 483 8.3E-20 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.0E-25 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 2.9E-122 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Gene3D G3DSA:3.40.50.720 1 42 2.4E-5 T 29-03-2018 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Gene3D G3DSA:3.40.50.720 56 208 1.2E-47 T 29-03-2018 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.4E-55 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 SUPERFAMILY SSF51735 29 209 9.24E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 Gene3D G3DSA:1.10.1040.10 210 488 2.2E-81 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS07520 d71d47eba4b50d712ecfb3fe8467efe5 492 SUPERFAMILY SSF48179 349 485 2.38E-38 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS10390 03962b1e216039eb5e3cd51f87a68fad 381 PIRSF PIRSF003085 1 375 1.0E-125 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CPU03_RS10390 03962b1e216039eb5e3cd51f87a68fad 381 Pfam PF02353 Mycolic acid cyclopropane synthetase 107 366 1.6E-96 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS10390 03962b1e216039eb5e3cd51f87a68fad 381 Gene3D G3DSA:3.40.50.150 103 370 1.6E-69 T 29-03-2018 CPU03_RS10390 03962b1e216039eb5e3cd51f87a68fad 381 SUPERFAMILY SSF53335 115 368 1.04E-81 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 Gene3D G3DSA:2.170.130.10 21 152 1.9E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 21 616 8.8E-192 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 616 34.112 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 Pfam PF00593 TonB dependent receptor 185 615 1.1E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 SUPERFAMILY SSF56935 29 616 5.76E-112 T 29-03-2018 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 Gene3D G3DSA:2.40.170.20 153 616 3.3E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 599 616 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CPU03_RS07745 f00c86fb9d6011a129a6fd773192cda4 616 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 147 7.2E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 SUPERFAMILY SSF82866 413 609 9.29E-42 T 29-03-2018 CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 50.781 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 Pfam PF02355 Protein export membrane protein 436 604 2.0E-17 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 3.2E-151 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 5.0E-85 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 Gene3D G3DSA:1.20.1640.10 400 610 2.5E-30 T 29-03-2018 CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 Pfam PF07549 SecD/SecF GG Motif 120 140 2.4E-6 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CPU03_RS03470 a585edf74148333c404f1249a65cc97d 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.4E-38 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 Gene3D G3DSA:3.30.1490.10 74 129 8.0E-23 T 29-03-2018 CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 32.073 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 SUPERFAMILY SSF56047 5 129 6.41E-47 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 Gene3D G3DSA:3.30.1370.30 1 66 2.6E-24 T 29-03-2018 CPU03_RS09450 95c6a6700a1a7815b9046db1eca553a1 130 Pfam PF00410 Ribosomal protein S8 5 129 1.3E-48 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 163 9.3E-60 T 29-03-2018 IPR022161 DNA helicase IV, N-terminal domain CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 Pfam PF13361 UvrD-like helicase C-terminal domain 590 659 7.6E-14 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 Gene3D G3DSA:3.40.50.300 187 490 2.9E-43 T 29-03-2018 CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 9.6E-37 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 SUPERFAMILY SSF52540 196 330 2.01E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 SUPERFAMILY SSF52540 385 673 2.01E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02045 887594a62d73a1d9ed79ea281938619a 684 Gene3D G3DSA:3.40.50.300 491 682 1.8E-26 T 29-03-2018 CPU03_RS13235 4d39c311a7d0eb9354a73a7668652f80 195 SUPERFAMILY SSF52821 47 173 8.12E-28 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13235 4d39c311a7d0eb9354a73a7668652f80 195 SMART SM00450 53 168 1.9E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13235 4d39c311a7d0eb9354a73a7668652f80 195 Pfam PF00581 Rhodanese-like domain 53 165 2.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13235 4d39c311a7d0eb9354a73a7668652f80 195 Gene3D G3DSA:3.40.250.10 43 187 4.3E-30 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 39.709 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 251 282 2.3E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 330 361 2.6 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 200 231 51.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 155 186 1.2E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 114 146 8.9E-4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SMART SM00564 65 96 0.02 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 Gene3D G3DSA:2.140.10.10 238 391 1.6E-19 T 29-03-2018 CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 390 1.3E-130 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 Pfam PF13360 PQQ-like domain 78 319 2.3E-51 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 Gene3D G3DSA:2.140.10.10 16 193 1.2E-28 T 29-03-2018 CPU03_RS11370 c8032f536414b717a421e8388ef4fc33 392 SUPERFAMILY SSF50998 32 383 2.58E-78 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 168 302 4.7E-19 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 284 302 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 264 283 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 178 196 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 242 263 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 220 241 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 154 177 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 302 319 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 198 219 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 9.6E-103 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 302 1.2E-106 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 SMART SM00047 149 313 2.5E-47 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 Gene3D G3DSA:1.10.530.10 150 306 4.5E-33 T 29-03-2018 CPU03_RS02195 092b3fcb6f5f902eb08f462d128c287b 320 Pfam PF10135 Rod binding protein 50 97 1.4E-16 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CPU03_RS15665 5eb1c5da4f53be16642a181a5aec0566 159 SUPERFAMILY SSF52788 1 135 1.7E-36 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS15665 5eb1c5da4f53be16642a181a5aec0566 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 132 8.2E-18 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS15665 5eb1c5da4f53be16642a181a5aec0566 159 SMART SM00226 1 135 1.1E-34 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS15665 5eb1c5da4f53be16642a181a5aec0566 159 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-30 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Gene3D G3DSA:1.10.287.950 399 597 5.8E-46 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Gene3D G3DSA:3.30.450.20 50 153 1.1E-16 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 SUPERFAMILY SSF103190 113 176 5.26E-6 T 29-03-2018 IPR029151 Periplasmic sensor domain-like CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Gene3D G3DSA:1.10.287.950 311 398 7.2E-9 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Pfam PF00672 HAMP domain 294 343 3.3E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 399 4.2E-53 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 4.2E-53 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 474 4.2E-53 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 4.2E-53 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 290 4.2E-53 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Gene3D G3DSA:3.30.450.20 154 270 2.3E-16 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 SUPERFAMILY SSF58104 316 597 8.89E-71 T 29-03-2018 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Pfam PF02743 Cache domain 41 255 1.3E-20 T 29-03-2018 IPR033479 Double Cache domain 1 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 SMART SM00304 293 348 7.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 SMART SM00283 349 596 1.1E-81 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS16485 c5e885f2842e5a5b10aa5e3cbcbb1056 597 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 562 1.4E-48 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 SUPERFAMILY SSF51338 545 583 6.91E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 SUPERFAMILY SSF51338 30 86 6.91E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 SUPERFAMILY SSF51556 85 124 5.26E-21 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 SUPERFAMILY SSF51556 242 546 5.26E-21 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 Gene3D G3DSA:2.30.40.10 22 96 6.4E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 Pfam PF07969 Amidohydrolase family 83 582 1.7E-54 T 29-03-2018 IPR013108 Amidohydrolase 3 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 Gene3D G3DSA:3.20.20.140 97 524 9.2E-29 T 29-03-2018 CPU03_RS08560 092e304ab248311fffd050d7424a82d9 588 Gene3D G3DSA:2.30.40.10 525 588 9.5E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 PIRSF PIRSF002808 1 430 1.6E-100 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 ProSitePatterns PS00942 glpT family of transporters signature. 136 152 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 Gene3D G3DSA:1.20.1250.20 220 428 1.3E-22 T 29-03-2018 CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 Gene3D G3DSA:1.20.1250.20 4 205 2.7E-40 T 29-03-2018 CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 SUPERFAMILY SSF103473 7 418 4.84E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01990 b170e45697bf86f4967d4ebc86ccb98c 430 Pfam PF07690 Major Facilitator Superfamily 21 383 2.2E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 SUPERFAMILY SSF53850 33 271 3.23E-85 T 29-03-2018 CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 PIRSF PIRSF002854 1 271 1.8E-107 T 29-03-2018 IPR004872 Lipoprotein NlpA family CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 6.9E-148 T 29-03-2018 IPR004872 Lipoprotein NlpA family CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 Gene3D G3DSA:3.40.190.10 127 271 3.6E-51 T 29-03-2018 CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 Pfam PF03180 NLPA lipoprotein 33 271 5.7E-101 T 29-03-2018 IPR004872 Lipoprotein NlpA family CPU03_RS05090 40a8cdea8eceb4a0c07a437ae84b451a 271 Gene3D G3DSA:3.40.190.10 32 126 5.6E-21 T 29-03-2018 CPU03_RS17080 1da0a4d0eccc1a06b78107c8c3266304 132 SUPERFAMILY SSF88723 1 131 1.32E-35 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS17080 1da0a4d0eccc1a06b78107c8c3266304 132 Pfam PF01850 PIN domain 4 124 1.6E-16 T 29-03-2018 IPR002716 PIN domain CPU03_RS17080 1da0a4d0eccc1a06b78107c8c3266304 132 Gene3D G3DSA:3.40.50.1010 2 132 1.4E-27 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS17080 1da0a4d0eccc1a06b78107c8c3266304 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 12.555 T 29-03-2018 IPR022907 VapC family GO:0004540 CPU03_RS01695 711ba4bd2807b0a70b3b26ca3b7e9583 488 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 53 439 1.2E-112 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CPU03_RS01695 711ba4bd2807b0a70b3b26ca3b7e9583 488 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 448 1.4E-78 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 Gene3D G3DSA:2.160.10.10 135 264 7.1E-28 T 29-03-2018 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 Gene3D G3DSA:1.10.3130.10 1 134 2.5E-37 T 29-03-2018 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 3.1E-75 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 SUPERFAMILY SSF51161 5 260 3.74E-66 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 2.5E-37 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 227 8.6E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 PIRSF PIRSF000441 75 267 1.2E-60 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CPU03_RS08390 8f099c5e2a075ee0de766a80cae572df 273 SMART SM00971 9 113 4.9E-60 T 29-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CPU03_RS03280 888dd4718bf94d9ea2d29f8a1d3c01d5 107 Gene3D G3DSA:1.10.10.10 7 107 1.4E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03280 888dd4718bf94d9ea2d29f8a1d3c01d5 107 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 11 90 2.6E-24 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS03280 888dd4718bf94d9ea2d29f8a1d3c01d5 107 SUPERFAMILY SSF46767 9 91 1.09E-23 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS04035 0b5acc3324160c1ddf2742c9836a0107 214 SUPERFAMILY SSF56784 10 142 5.47E-9 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS04035 0b5acc3324160c1ddf2742c9836a0107 214 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 8 213 4.2E-84 T 29-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CPU03_RS04035 0b5acc3324160c1ddf2742c9836a0107 214 Pfam PF12710 haloacid dehalogenase-like hydrolase 12 194 2.0E-16 T 29-03-2018 CPU03_RS04035 0b5acc3324160c1ddf2742c9836a0107 214 Gene3D G3DSA:3.40.50.1000 9 208 3.3E-7 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 SUPERFAMILY SSF52540 6 233 2.05E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 Gene3D G3DSA:3.40.50.300 3 248 1.1E-49 T 29-03-2018 CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 SMART SM00382 31 221 7.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 SMART SM00382 282 486 8.0E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 SUPERFAMILY SSF52540 273 485 2.21E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 Gene3D G3DSA:3.40.50.300 261 496 7.2E-36 T 29-03-2018 CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 Pfam PF00005 ABC transporter 22 173 2.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08810 c840ef51f5a4e269a6cfa142f4020fe4 498 Pfam PF00005 ABC transporter 274 428 4.6E-23 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS07040 631c5311915da501886f94b8f911101b 227 Pfam PF04493 Endonuclease V 15 204 9.8E-74 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CPU03_RS07040 631c5311915da501886f94b8f911101b 227 Hamap MF_00801 Endonuclease V [nfi]. 2 214 33.919 T 29-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CPU03_RS01665 3b0a2cbee46bf73bbb00e583f93b70a9 326 Gene3D G3DSA:3.40.190.10 193 315 9.7E-4 T 29-03-2018 CPU03_RS01665 3b0a2cbee46bf73bbb00e583f93b70a9 326 Pfam PF01966 HD domain 119 208 2.7E-5 T 29-03-2018 IPR006674 HD domain CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 Pfam PF07690 Major Facilitator Superfamily 26 289 3.7E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 54.076 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 4.2E-181 T 29-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 SUPERFAMILY SSF103473 264 452 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 SUPERFAMILY SSF103473 8 203 1.57E-63 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 Gene3D G3DSA:1.20.1250.20 11 208 3.3E-34 T 29-03-2018 CPU03_RS15305 195149aec72d3fcad71cf47d41d41f57 496 Gene3D G3DSA:1.20.1250.20 267 466 1.8E-18 T 29-03-2018 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SMART SM00869 1118 1369 1.4E-25 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF50494 114 290 7.17E-6 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 Gene3D G3DSA:2.40.128.130 1076 1380 8.5E-47 T 29-03-2018 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF103515 1099 1380 1.05E-41 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 970 1380 2.1E-72 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF51126 392 519 2.32E-59 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF51126 607 743 2.32E-59 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF51126 918 1078 2.32E-59 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 SUPERFAMILY SSF51126 814 848 2.32E-59 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 Pfam PF03797 Autotransporter beta-domain 1121 1357 1.5E-32 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 Pfam PF02395 Immunoglobulin A1 protease 49 799 4.6E-129 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 62 82 5.1E-15 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 258 276 5.1E-15 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 CPU03_RS03820 4e3a9e201fea8ac45677983672a8d2f4 1380 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 641 663 5.1E-15 T 29-03-2018 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 1.7E-32 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Gene3D G3DSA:3.30.310.50 374 444 2.3E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 4.6E-20 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 SUPERFAMILY SSF53738 258 365 1.41E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Gene3D G3DSA:3.40.120.10 3 154 1.9E-48 T 29-03-2018 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 SUPERFAMILY SSF55957 357 444 4.06E-22 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Gene3D G3DSA:3.40.120.10 270 373 6.3E-29 T 29-03-2018 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.5E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.5E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.5E-13 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 SUPERFAMILY SSF53738 156 256 4.71E-30 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.952 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 SUPERFAMILY SSF53738 3 181 7.46E-49 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 2.0E-14 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 5.5E-45 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.9E-196 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CPU03_RS06045 7c2cea352497310f6d054636105f4072 445 Gene3D G3DSA:3.40.120.10 156 269 1.8E-34 T 29-03-2018 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 SUPERFAMILY SSF53633 7 257 5.24E-64 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 Hamap MF_00456 Glutamate 5-kinase [proB]. 6 260 35.237 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 SUPERFAMILY SSF88697 277 367 8.84E-24 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 Pfam PF00696 Amino acid kinase family 7 235 2.6E-42 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PRINTS PR00474 Glutamate 5-kinase family signature 210 230 1.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PRINTS PR00474 Glutamate 5-kinase family signature 77 105 1.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PRINTS PR00474 Glutamate 5-kinase family signature 117 138 1.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PRINTS PR00474 Glutamate 5-kinase family signature 149 176 1.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 1.4E-54 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 Gene3D G3DSA:3.40.1160.10 2 266 6.2E-61 T 29-03-2018 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 Pfam PF01472 PUA domain 277 351 2.9E-21 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 ProSitePatterns PS00902 Glutamate 5-kinase signature. 208 225 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 SMART SM00359 277 360 3.2E-21 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 PIRSF PIRSF000729 1 368 3.0E-139 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 Gene3D G3DSA:2.30.130.10 275 367 2.9E-27 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS03905 d7d206af5a936a2220498c437dc21484 368 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 366 1.7E-150 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CPU03_RS01590 4b3ba1024ac62341addcd8b2de647a64 284 Gene3D G3DSA:3.20.20.70 17 277 1.9E-66 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS01590 4b3ba1024ac62341addcd8b2de647a64 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.1E-117 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS01590 4b3ba1024ac62341addcd8b2de647a64 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.469 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS01590 4b3ba1024ac62341addcd8b2de647a64 284 Pfam PF00793 DAHP synthetase I family 10 274 4.7E-66 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS01590 4b3ba1024ac62341addcd8b2de647a64 284 SUPERFAMILY SSF51569 3 279 3.57E-104 T 29-03-2018 CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.7E-134 T 29-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 SUPERFAMILY SSF51735 9 252 7.38E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.0E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 5.6E-57 T 29-03-2018 CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 Gene3D G3DSA:3.40.50.720 3 44 3.1E-6 T 29-03-2018 CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 Gene3D G3DSA:3.40.50.720 45 253 1.0E-58 T 29-03-2018 CPU03_RS00605 1936a1e0e12f156b8d75c4f013faf793 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 PIRSF PIRSF000235 1 348 3.9E-197 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.0E-76 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 SUPERFAMILY SSF51412 6 335 1.83E-98 T 29-03-2018 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 Gene3D G3DSA:3.20.20.70 8 341 2.0E-79 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 5.7E-198 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 SMART SM01240 7 344 5.7E-135 T 29-03-2018 CPU03_RS04600 6e9b1904c3f3ce452dfaec312501bbcf 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.615 T 29-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 SUPERFAMILY SSF53223 2 100 2.19E-33 T 29-03-2018 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 268 32.769 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.9E-26 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 267 3.1E-95 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 SUPERFAMILY SSF51735 101 266 1.16E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 Gene3D G3DSA:3.40.50.10860 1 107 1.1E-38 T 29-03-2018 CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 189 3.6E-10 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CPU03_RS09575 2ece29be6592370295794c708c3a0777 271 Gene3D G3DSA:3.40.50.720 108 271 1.7E-35 T 29-03-2018 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.5E-74 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 SUPERFAMILY SSF52540 4 642 5.32E-184 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Gene3D G3DSA:3.40.50.300 383 656 3.8E-53 T 29-03-2018 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.9E-74 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Gene3D G3DSA:3.40.50.300 283 382 3.4E-26 T 29-03-2018 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Gene3D G3DSA:3.40.50.300 149 282 7.6E-32 T 29-03-2018 CPU03_RS07345 dfa86ce68143aab41af9b90c85aa474c 720 Gene3D G3DSA:3.40.50.300 4 146 1.3E-28 T 29-03-2018 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 Gene3D G3DSA:3.10.105.10 307 514 5.3E-63 T 29-03-2018 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 Gene3D G3DSA:3.90.76.10 45 210 7.2E-37 T 29-03-2018 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 Gene3D G3DSA:3.40.190.10 211 306 5.5E-28 T 29-03-2018 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 SUPERFAMILY SSF53850 36 541 1.61E-158 T 29-03-2018 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 PIRSF PIRSF002741 30 542 2.1E-119 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS08640 442c74d5ba652c0f58d07d5565b3efb9 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 460 1.6E-106 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS06490 73fde453edd98c8898ad74778b2cbec3 348 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 51 332 1.3E-66 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CPU03_RS06490 73fde453edd98c8898ad74778b2cbec3 348 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 52 339 1.0E-112 T 29-03-2018 IPR014301 TMAO reductase system, periplasmic protein TorT CPU03_RS06490 73fde453edd98c8898ad74778b2cbec3 348 Gene3D G3DSA:3.40.50.2300 48 164 1.7E-15 T 29-03-2018 CPU03_RS06490 73fde453edd98c8898ad74778b2cbec3 348 SUPERFAMILY SSF53822 52 311 1.23E-38 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS06490 73fde453edd98c8898ad74778b2cbec3 348 Gene3D G3DSA:3.40.50.2300 165 311 2.4E-20 T 29-03-2018 CPU03_RS00175 f45f28f18c7673214e08d094693e8e03 342 Gene3D G3DSA:3.90.1690.10 3 341 5.0E-62 T 29-03-2018 CPU03_RS00175 f45f28f18c7673214e08d094693e8e03 342 Pfam PF03864 Phage major capsid protein E 4 339 4.9E-66 T 29-03-2018 IPR005564 Major capsid protein GpE GO:0019028 CPU03_RS11155 85ed5481e4180de665e0cdedffe47685 355 PIRSF PIRSF001361 1 352 2.5E-161 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS11155 85ed5481e4180de665e0cdedffe47685 355 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 348 1.6E-163 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS11155 85ed5481e4180de665e0cdedffe47685 355 Gene3D G3DSA:3.20.20.70 9 351 1.2E-127 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS11155 85ed5481e4180de665e0cdedffe47685 355 SUPERFAMILY SSF51569 8 346 3.04E-136 T 29-03-2018 CPU03_RS11155 85ed5481e4180de665e0cdedffe47685 355 Pfam PF00793 DAHP synthetase I family 41 340 4.7E-103 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS16100 c024fd594e930546eccc385afea957ab 92 Hamap MF_00674 UPF0251 protein . 2 92 23.495 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 CPU03_RS16100 c024fd594e930546eccc385afea957ab 92 Pfam PF02001 Protein of unknown function DUF134 3 90 4.2E-22 T 29-03-2018 IPR002852 Uncharacterised protein family UPF0251 CPU03_RS16100 c024fd594e930546eccc385afea957ab 92 Gene3D G3DSA:1.10.10.60 3 60 2.7E-7 T 29-03-2018 CPU03_RS16100 c024fd594e930546eccc385afea957ab 92 Gene3D G3DSA:1.10.10.10 61 92 3.7E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16100 c024fd594e930546eccc385afea957ab 92 SUPERFAMILY SSF88659 34 82 7.66E-8 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS04475 834d11b6562d74b876b5f8900502e9ee 160 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 151 3.9E-64 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CPU03_RS04475 834d11b6562d74b876b5f8900502e9ee 160 Pfam PF03830 PTS system sorbose subfamily IIB component 6 150 8.7E-52 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS04475 834d11b6562d74b876b5f8900502e9ee 160 Gene3D G3DSA:3.40.35.10 5 160 7.4E-58 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS04475 834d11b6562d74b876b5f8900502e9ee 160 SUPERFAMILY SSF52728 5 158 1.44E-51 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 Gene3D G3DSA:3.40.630.10 1 417 1.3E-42 T 29-03-2018 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 SUPERFAMILY SSF55031 211 321 1.13E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 PIRSF PIRSF037215 1 410 7.1E-148 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 SUPERFAMILY SSF53187 2 212 9.95E-66 T 29-03-2018 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 SUPERFAMILY SSF53187 325 406 9.95E-66 T 29-03-2018 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 Pfam PF01546 Peptidase family M20/M25/M40 140 405 3.7E-11 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS03940 86cd8572e22a942ddcafb98a50b6e87a 417 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 2.2E-101 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 SUPERFAMILY SSF141868 427 668 2.22E-79 T 29-03-2018 IPR001633 EAL domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 SMART SM00052 421 663 4.5E-91 T 29-03-2018 IPR001633 EAL domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 SMART SM00267 239 411 7.5E-7 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 Gene3D G3DSA:3.20.20.450 418 666 2.8E-85 T 29-03-2018 IPR001633 EAL domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 Gene3D G3DSA:3.30.70.270 244 417 1.5E-17 T 29-03-2018 CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 41 163 4.6E-42 T 29-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 406 1.8E-5 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 Pfam PF00563 EAL domain 427 657 7.4E-70 T 29-03-2018 IPR001633 EAL domain CPU03_RS08710 18e3041ccd44414e5ba47c9f0e6517dd 674 SUPERFAMILY SSF55073 256 413 6.91E-11 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS10175 ced7d86abc6a5d93afe5e049d7baddec 185 SUPERFAMILY SSF56349 4 184 1.35E-41 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS10175 ced7d86abc6a5d93afe5e049d7baddec 185 Pfam PF00589 Phage integrase family 5 174 3.4E-43 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS10175 ced7d86abc6a5d93afe5e049d7baddec 185 Gene3D G3DSA:1.10.443.10 4 180 3.5E-36 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS11655 de3a2ee706f56eb88d32e19c12f5be38 668 Pfam PF13175 AAA ATPase domain 1 422 4.4E-18 T 29-03-2018 CPU03_RS11655 de3a2ee706f56eb88d32e19c12f5be38 668 SUPERFAMILY SSF52540 1 213 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11655 de3a2ee706f56eb88d32e19c12f5be38 668 SUPERFAMILY SSF52540 300 422 1.74E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11655 de3a2ee706f56eb88d32e19c12f5be38 668 Gene3D G3DSA:3.40.50.300 1 442 8.9E-22 T 29-03-2018 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 Pfam PF01795 MraW methylase family 4 312 2.5E-118 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 SUPERFAMILY SSF81799 114 214 1.31E-33 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 Gene3D G3DSA:1.10.150.170 112 216 4.4E-36 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 311 4.8E-127 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 312 38.986 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 SUPERFAMILY SSF53335 7 113 8.48E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 SUPERFAMILY SSF53335 214 312 8.48E-45 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS04710 976fa846bdb088490a9304e0a6f32baa 314 PIRSF PIRSF004486 1 313 6.0E-100 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 Gene3D G3DSA:3.40.50.1360 67 238 1.8E-30 T 29-03-2018 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 SMART SM00420 5 57 5.5E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 SUPERFAMILY SSF46785 2 56 5.88E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 SUPERFAMILY SSF100950 78 233 5.44E-27 T 29-03-2018 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 SMART SM01134 74 234 1.4E-50 T 29-03-2018 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 Gene3D G3DSA:1.10.10.10 1 57 9.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.2E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.2E-8 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 Pfam PF00455 DeoR C terminal sensor domain 76 232 4.9E-43 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 Pfam PF08220 DeoR-like helix-turn-helix domain 5 56 4.4E-20 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CPU03_RS06555 cbed758ddff537688dece136bdcd646d 245 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.9E-184 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 Gene3D G3DSA:3.65.10.10 220 418 9.5E-47 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 Gene3D G3DSA:3.65.10.10 21 219 3.1E-50 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.296 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 SUPERFAMILY SSF55205 1 416 5.89E-146 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CPU03_RS05295 7f396d7ea158d718cf41ec4a7f449575 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 4.6E-125 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS10550 1a41d2045dffd5895013edeaf2fc17ed 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 6.1E-68 T 29-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CPU03_RS10550 1a41d2045dffd5895013edeaf2fc17ed 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.256 T 29-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 CPU03_RS10550 1a41d2045dffd5895013edeaf2fc17ed 205 Pfam PF01810 LysE type translocator 14 202 1.4E-50 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:2.60.120.10 4 144 7.5E-34 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF51206 8 136 1.07E-35 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 SMART SM00100 2 122 7.6E-27 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 SMART SM00419 160 208 4.5E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CPU03_RS09090 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CPU03_RS00905 f056faf9891daa14b068854f7e75210d 206 Pfam PF01300 Telomere recombination 23 198 7.9E-46 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CPU03_RS00905 f056faf9891daa14b068854f7e75210d 206 Gene3D G3DSA:3.90.870.10 1 204 1.5E-59 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS00905 f056faf9891daa14b068854f7e75210d 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.3E-72 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CPU03_RS00905 f056faf9891daa14b068854f7e75210d 206 SUPERFAMILY SSF55821 1 203 9.16E-65 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.3E-26 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.3E-26 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.3E-26 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.3E-26 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.3E-26 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 Gene3D G3DSA:3.40.50.2300 2 142 1.6E-41 T 29-03-2018 CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 SUPERFAMILY SSF52788 1 142 5.36E-42 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 138 6.1E-38 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS14525 08cc92ad5530f3a4a295dfe67237bf84 142 SMART SM00226 3 141 4.3E-56 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 Gene3D G3DSA:3.20.20.10 1 236 8.5E-73 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 231 1.1E-91 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 231 8.9E-33 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 81 95 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 SUPERFAMILY SSF51419 4 229 2.09E-81 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS06610 ecbe3ef85023609239948327d355deb9 236 PIRSF PIRSF004848 1 236 2.7E-75 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CPU03_RS01935 b15a4090095a5cd93dc55a838f419127 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 2.2E-29 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CPU03_RS01935 b15a4090095a5cd93dc55a838f419127 67 Pfam PF14001 YdfZ protein 3 65 3.1E-27 T 29-03-2018 IPR017704 Putative selenium-binding protein YdfZ CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SUPERFAMILY SSF81923 4 156 1.37E-43 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Gene3D G3DSA:3.40.50.300 157 342 2.5E-25 T 29-03-2018 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 5.5E-27 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Gene3D G3DSA:1.10.8.60 766 857 5.8E-22 T 29-03-2018 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 6.4E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SMART SM00382 597 738 1.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SMART SM00382 198 342 3.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SUPERFAMILY SSF52540 546 849 6.85E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Gene3D G3DSA:3.40.50.300 552 765 2.2E-56 T 29-03-2018 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Gene3D G3DSA:1.10.1780.10 1 151 1.1E-33 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SMART SM01086 766 855 2.5E-35 T 29-03-2018 IPR019489 Clp ATPase, C-terminal CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 SUPERFAMILY SSF52540 159 545 5.4E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.4E-56 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Gene3D G3DSA:1.10.8.60 343 547 3.4E-44 T 29-03-2018 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.3E-11 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS11195 ec1e5d4a484e55b681ca2bb6355e9e62 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.5E-14 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 SMART SM00228 115 186 0.057 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 SMART SM00228 211 280 2.1E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 Pfam PF13180 PDZ domain 221 287 7.8E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 Gene3D G3DSA:2.30.42.10 126 220 9.8E-11 T 29-03-2018 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 Pfam PF02163 Peptidase family M50 10 438 3.5E-86 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 SUPERFAMILY SSF50156 86 192 3.29E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 451 2.1E-152 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 SUPERFAMILY SSF50156 204 292 5.13E-19 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS04155 8fd0ff48759f0839e7d5a79dbab2d3ff 451 Gene3D G3DSA:2.30.42.10 224 310 1.7E-20 T 29-03-2018 CPU03_RS12555 58d9759af429c8aff0c999bd2c602ec5 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.4E-109 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS12555 58d9759af429c8aff0c999bd2c602ec5 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.2E-191 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS12555 58d9759af429c8aff0c999bd2c602ec5 379 PIRSF PIRSF000267 2 378 3.9E-131 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CPU03_RS15115 4daa9f5497fefff06de170c8d4d354a4 366 SUPERFAMILY SSF53807 15 333 1.3E-42 T 29-03-2018 CPU03_RS15115 4daa9f5497fefff06de170c8d4d354a4 366 Gene3D G3DSA:3.40.50.1980 148 335 5.8E-42 T 29-03-2018 CPU03_RS15115 4daa9f5497fefff06de170c8d4d354a4 366 Pfam PF01497 Periplasmic binding protein 88 309 7.7E-24 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CPU03_RS15115 4daa9f5497fefff06de170c8d4d354a4 366 Gene3D G3DSA:3.40.50.1980 8 147 1.5E-18 T 29-03-2018 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Pfam PF03173 Putative carbohydrate binding domain 35 194 3.1E-69 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 SUPERFAMILY SSF49384 26 197 1.76E-68 T 29-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 330 347 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 748 765 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 436 453 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 503 521 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 530 543 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 296 316 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 359 380 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 PRINTS PR00738 Glycosyl hydrolase family 20 signature 730 746 2.2E-46 T 29-03-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Gene3D G3DSA:2.60.40.10 821 886 2.6E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Gene3D G3DSA:3.20.20.80 334 820 2.9E-121 T 29-03-2018 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 214 333 2.9E-16 T 29-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 SMART SM01081 34 195 8.6E-97 T 29-03-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 336 766 1.8E-114 T 29-03-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Gene3D G3DSA:3.30.379.10 207 333 1.2E-17 T 29-03-2018 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 SUPERFAMILY SSF51445 336 775 4.21E-141 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Gene3D G3DSA:2.60.40.290 25 167 3.6E-38 T 29-03-2018 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 SUPERFAMILY SSF81296 783 886 7.0E-38 T 29-03-2018 IPR014756 Immunoglobulin E-set CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 807 883 1.6E-31 T 29-03-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS12395 4af3a0c0b4af4f1c4724fdca6ed89d60 888 SUPERFAMILY SSF55545 205 335 1.7E-26 T 29-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 CPU03_RS02520 1a13dca46bdb1b3d95a6ecaa710a67eb 138 Pfam PF03788 LrgA family 23 113 5.9E-31 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CPU03_RS02520 1a13dca46bdb1b3d95a6ecaa710a67eb 138 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.74 T 29-03-2018 IPR022957 Uncharacterised protein family UPF0299 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 871 932 9.6E-7 T 29-03-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 SUPERFAMILY SSF49863 870 1014 3.92E-23 T 29-03-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Pfam PF09093 Lyase, catalytic 255 580 1.3E-79 T 29-03-2018 IPR015177 Lyase, catalytic CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Gene3D G3DSA:1.50.10.100 196 591 4.9E-62 T 29-03-2018 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Gene3D G3DSA:2.70.98.10 592 875 1.6E-61 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 SUPERFAMILY SSF48230 255 596 1.19E-84 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Pfam PF09092 Lyase, N terminal 38 192 8.0E-39 T 29-03-2018 IPR015176 Lyase, N-terminal CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 617 859 9.2E-26 T 29-03-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Gene3D G3DSA:2.60.120.430 24 195 1.6E-35 T 29-03-2018 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 Gene3D G3DSA:2.60.220.10 876 1014 1.7E-32 T 29-03-2018 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 SUPERFAMILY SSF74650 592 867 6.28E-57 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 SUPERFAMILY SSF49785 37 195 2.47E-42 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS10760 e14c00f0b608e494c5e31249b70a2c84 1015 PIRSF PIRSF034515 5 1015 0.0 T 29-03-2018 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 CPU03_RS15530 d4a011a60a8ac03f24cb01f3fae1bd41 127 Pfam PF03713 Domain of unknown function (DUF305) 57 120 1.8E-20 T 29-03-2018 IPR005183 Domain of unknown function DUF305 CPU03_RS15530 d4a011a60a8ac03f24cb01f3fae1bd41 127 Gene3D G3DSA:1.20.1260.10 11 111 1.9E-27 T 29-03-2018 IPR012347 Ferritin-related CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 SUPERFAMILY SSF52540 323 824 8.04E-109 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 SUPERFAMILY SSF52540 117 201 8.04E-109 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 SUPERFAMILY SSF52540 13 79 8.04E-109 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Gene3D G3DSA:3.40.50.300 444 593 8.2E-16 T 29-03-2018 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Gene3D G3DSA:3.40.50.300 604 884 1.8E-29 T 29-03-2018 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Pfam PF13361 UvrD-like helicase C-terminal domain 702 811 4.6E-11 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Gene3D G3DSA:3.90.320.10 892 1184 2.1E-86 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 7 1176 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 435 9.5E-61 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Pfam PF12705 PD-(D/E)XK nuclease superfamily 955 1149 2.1E-4 T 29-03-2018 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Gene3D G3DSA:1.10.3170.10 154 347 7.5E-59 T 29-03-2018 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 SUPERFAMILY SSF52980 902 1178 4.61E-88 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CPU03_RS04315 88fce92853a98d5e84e1e8607c507b88 1186 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1177 23.09 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CPU03_RS14020 33af23eb406966aa3c3baaedf6742e1b 299 SUPERFAMILY SSF49401 162 298 1.89E-7 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS14020 33af23eb406966aa3c3baaedf6742e1b 299 Gene3D G3DSA:2.60.40.1090 151 299 8.0E-11 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS11775 e99b25dac638bb2aae9ffd647a14dc6a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 237 1.6E-103 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CPU03_RS11775 e99b25dac638bb2aae9ffd647a14dc6a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 5.9E-105 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CPU03_RS11775 e99b25dac638bb2aae9ffd647a14dc6a 243 SUPERFAMILY SSF63892 4 242 6.67E-101 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CPU03_RS11775 e99b25dac638bb2aae9ffd647a14dc6a 243 Gene3D G3DSA:3.20.20.70 4 238 1.4E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS11775 e99b25dac638bb2aae9ffd647a14dc6a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.127 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CPU03_RS15540 2499b1e4871922cc06c2744a118a94c3 361 Pfam PF03824 High-affinity nickel-transport protein 13 356 6.5E-43 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CPU03_RS15045 345e6be0c0ffb75361a4131844807e7b 189 Gene3D G3DSA:3.40.50.150 8 185 4.1E-23 T 29-03-2018 CPU03_RS15045 345e6be0c0ffb75361a4131844807e7b 189 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 18 131 3.1E-6 T 29-03-2018 CPU03_RS15045 345e6be0c0ffb75361a4131844807e7b 189 SUPERFAMILY SSF53335 3 148 3.25E-23 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS15045 345e6be0c0ffb75361a4131844807e7b 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 3.8E-38 T 29-03-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 3.6E-21 T 29-03-2018 IPR025877 MobA-like NTP transferase CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 SUPERFAMILY SSF53448 6 252 7.44E-66 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Gene3D G3DSA:3.90.550.10 1 244 1.0E-54 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Gene3D G3DSA:2.160.10.10 245 322 6.7E-16 T 29-03-2018 CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.3E-9 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 269 299 7.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Gene3D G3DSA:2.160.10.10 323 440 3.1E-31 T 29-03-2018 CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 SUPERFAMILY SSF51161 255 437 9.98E-51 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 455 7.4E-201 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CPU03_RS08110 881bd23ca72cd3e3583774eb8ce54fd0 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.714 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 29-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 SUPERFAMILY SSF56655 2 327 1.34E-111 T 29-03-2018 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PIRSF PIRSF500210 1 332 9.1E-125 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PIRSF PIRSF000904 1 333 1.8E-121 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 5.1E-71 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.028 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 Gene3D G3DSA:3.40.190.80 196 331 3.6E-56 T 29-03-2018 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 Gene3D G3DSA:3.30.540.10 1 195 1.3E-61 T 29-03-2018 CPU03_RS06140 b9c22f5c960f6ce5ce1d10e0f999545f 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 2.1E-79 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CPU03_RS06575 57a733c9f39d297c1cae8b3d45e9ab8f 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 427 7.5E-131 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CPU03_RS06575 57a733c9f39d297c1cae8b3d45e9ab8f 439 PIRSF PIRSF006060 2 436 4.6E-47 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS06575 57a733c9f39d297c1cae8b3d45e9ab8f 439 Pfam PF13520 Amino acid permease 7 420 5.6E-39 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS14695 0d5b7839160de1dae1f6250b37d1ae9d 82 SUPERFAMILY SSF54857 1 77 1.18E-26 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS14695 0d5b7839160de1dae1f6250b37d1ae9d 82 Pfam PF06183 DinI-like family 14 76 1.6E-28 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS14695 0d5b7839160de1dae1f6250b37d1ae9d 82 Gene3D G3DSA:3.30.910.10 1 76 7.3E-32 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS13860 bde16e8612065a306ee2abe0aa0147d4 430 Pfam PF03222 Tryptophan/tyrosine permease family 31 392 3.1E-9 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CPU03_RS13860 bde16e8612065a306ee2abe0aa0147d4 430 TIGRFAM TIGR00814 stp: serine transporter 19 419 3.0E-182 T 29-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CPU03_RS11685 fb3029fda9942608f10913dcf7c62b4b 118 Pfam PF04355 SmpA / OmlA family 35 104 2.6E-25 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CPU03_RS11685 fb3029fda9942608f10913dcf7c62b4b 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 31.677 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE CPU03_RS11685 fb3029fda9942608f10913dcf7c62b4b 118 Gene3D G3DSA:3.30.1450.10 35 110 7.9E-10 T 29-03-2018 CPU03_RS03050 8fea2c88674b2a6960a3e1cb9d1c7e7b 212 Pfam PF01323 DSBA-like thioredoxin domain 45 184 2.3E-19 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CPU03_RS03050 8fea2c88674b2a6960a3e1cb9d1c7e7b 212 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS03050 8fea2c88674b2a6960a3e1cb9d1c7e7b 212 SUPERFAMILY SSF52833 25 199 6.34E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS03050 8fea2c88674b2a6960a3e1cb9d1c7e7b 212 Gene3D G3DSA:3.40.30.10 21 211 4.0E-32 T 29-03-2018 CPU03_RS03050 8fea2c88674b2a6960a3e1cb9d1c7e7b 212 PIRSF PIRSF001488 2 211 1.2E-62 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CPU03_RS13085 299e02616f37bc74bee87f4d2303057c 273 SUPERFAMILY SSF55166 20 269 6.36E-98 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS13085 299e02616f37bc74bee87f4d2303057c 273 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 268 1.8E-95 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CPU03_RS13085 299e02616f37bc74bee87f4d2303057c 273 Gene3D G3DSA:3.30.1380.10 19 272 3.8E-95 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS13085 299e02616f37bc74bee87f4d2303057c 273 PIRSF PIRSF018455 8 273 7.7E-114 T 29-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 Gene3D G3DSA:3.20.20.150 1 282 1.2E-62 T 29-03-2018 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 2.3E-106 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 29-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.295 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 5.6E-39 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 SUPERFAMILY SSF51658 1 277 1.57E-100 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CPU03_RS02490 a8e03c42c6a2297961dc8b5d0060e4eb 282 SMART SM00518 3 279 7.1E-123 T 29-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 SUPERFAMILY SSF56024 66 315 4.45E-48 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Pfam PF13091 PLD-like domain 134 243 1.7E-11 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Pfam PF13091 PLD-like domain 329 442 5.9E-23 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 PIRSF PIRSF000850 110 180 58.0 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 PIRSF PIRSF000850 383 451 0.44 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 PIRSF PIRSF000850 308 377 0.0012 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 SMART SM00155 219 246 3.1E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 SMART SM00155 399 426 4.2E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 8.3E-7 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Gene3D G3DSA:3.30.870.10 101 289 7.5E-27 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.618 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.8E-205 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 SUPERFAMILY SSF56024 274 473 3.59E-48 T 29-03-2018 CPU03_RS01010 dfd92d1b605cd5ff440d60098bc1cf9b 486 Gene3D G3DSA:3.30.870.10 317 473 5.1E-26 T 29-03-2018 CPU03_RS12140 98f12b17f3656ab1181bf2400c3f5d25 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CPU03_RS12140 98f12b17f3656ab1181bf2400c3f5d25 261 SUPERFAMILY SSF52096 2 261 5.86E-82 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS12140 98f12b17f3656ab1181bf2400c3f5d25 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 260 1.0E-80 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CPU03_RS12140 98f12b17f3656ab1181bf2400c3f5d25 261 Gene3D G3DSA:3.90.226.10 4 214 1.3E-67 T 29-03-2018 CPU03_RS12140 98f12b17f3656ab1181bf2400c3f5d25 261 Gene3D G3DSA:1.10.12.10 215 261 5.3E-19 T 29-03-2018 IPR014748 Crontonase, C-terminal CPU03_RS03935 e06b77bd8c80155b0ba05bac5a567c69 453 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 443 2.5E-111 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CPU03_RS03935 e06b77bd8c80155b0ba05bac5a567c69 453 Pfam PF03606 C4-dicarboxylate anaerobic carrier 4 449 1.3E-83 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CPU03_RS07750 430f1eb52d6a9ba9299b5ea7cdb444be 274 Gene3D G3DSA:3.40.50.1000 41 206 1.8E-22 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07750 430f1eb52d6a9ba9299b5ea7cdb444be 274 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 16 242 5.5E-57 T 29-03-2018 IPR005519 Acid phosphatase, class B-like CPU03_RS07750 430f1eb52d6a9ba9299b5ea7cdb444be 274 PIRSF PIRSF019271 1 272 1.8E-92 T 29-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CPU03_RS07750 430f1eb52d6a9ba9299b5ea7cdb444be 274 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 9 269 7.2E-83 T 29-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 CPU03_RS07750 430f1eb52d6a9ba9299b5ea7cdb444be 274 SUPERFAMILY SSF56784 56 247 1.07E-31 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 SUPERFAMILY SSF55874 426 558 4.66E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 SMART SM00065 220 367 4.0E-4 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 Gene3D G3DSA:3.30.565.10 384 560 1.7E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 Gene3D G3DSA:3.30.450.40 210 382 6.5E-5 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 Pfam PF07694 5TMR of 5TMR-LYT 30 198 2.7E-57 T 29-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 Pfam PF06580 Histidine kinase 373 449 1.3E-24 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CPU03_RS08865 a9f2feeb86dc8ac6249e04e2a75766de 579 SUPERFAMILY SSF55781 237 357 4.91E-6 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS07905 bd1ce075f174683314da93d4fc5128c7 174 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 168 17.029 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CPU03_RS07905 bd1ce075f174683314da93d4fc5128c7 174 Pfam PF04220 Der GTPase activator (YihI) 12 165 8.6E-55 T 29-03-2018 IPR007336 Der GTPase activator GO:0005096 CPU03_RS08010 4a4fbcec53686b88e10bd436ff81ed07 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 318 4.0E-52 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CPU03_RS08010 4a4fbcec53686b88e10bd436ff81ed07 326 Gene3D G3DSA:1.10.3470.10 20 324 1.9E-39 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 Gene3D G3DSA:1.10.569.10 272 463 2.1E-23 T 29-03-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 Gene3D G3DSA:1.10.599.10 467 688 7.9E-40 T 29-03-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 204 7.2E-67 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 SMART SM00790 5 206 8.1E-86 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 Gene3D G3DSA:3.60.9.10 2 210 2.4E-71 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 1.1E-62 T 29-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 SUPERFAMILY SSF56228 3 209 2.49E-61 T 29-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS02775 e002e23ac10981aec2ac081a10ebabb3 700 SUPERFAMILY SSF48310 212 698 3.01E-63 T 29-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 Gene3D G3DSA:1.25.40.10 176 359 2.6E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.395 T 29-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 Gene3D G3DSA:1.25.40.10 36 123 2.4E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 SMART SM00028 214 247 0.25 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 SMART SM00028 107 140 240.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 SMART SM00028 180 213 81.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 SMART SM00028 69 102 56.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 Pfam PF14559 Tetratricopeptide repeat 191 251 1.5E-5 T 29-03-2018 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 SUPERFAMILY SSF81901 40 249 6.02E-14 T 29-03-2018 CPU03_RS14640 04505900b459cc71eb3a164c22f91204 389 Gene3D G3DSA:1.25.40.10 124 175 4.9E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 6.9E-56 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 76.626 T 29-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 1.8E-115 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Gene3D G3DSA:1.20.5.170 206 229 1.3E-15 T 29-03-2018 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 SMART SM00984 324 420 9.7E-22 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 SUPERFAMILY SSF48179 206 298 2.04E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 PIRSF PIRSF500136 1 420 1.1E-147 T 29-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 SUPERFAMILY SSF52413 313 419 1.24E-23 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Gene3D G3DSA:3.40.50.720 230 420 8.8E-49 T 29-03-2018 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 SUPERFAMILY SSF51735 5 198 8.34E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 PIRSF PIRSF000124 4 419 6.4E-68 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 5.4E-26 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 1.4E-16 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CPU03_RS07470 1b4d7f3c9b9643125da87893309e0efb 420 Gene3D G3DSA:3.40.50.720 3 204 1.5E-42 T 29-03-2018 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 SUPERFAMILY SSF55729 1 198 2.7E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 95 107 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 120 141 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 164 181 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 PRINTS PR01549 Autoinducer synthesis protein signature 142 163 1.6E-57 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 Gene3D G3DSA:3.40.630.30 1 214 1.2E-35 T 29-03-2018 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 29-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS12485 fa0c0636f3ccb6a81e90c375d1471227 222 Pfam PF00765 Autoinducer synthase 10 188 1.3E-73 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CPU03_RS11640 8326dfdbe597ce085f11175c64c33f30 191 Pfam PF07455 Phage polarity suppression protein (Psu) 6 185 4.4E-42 T 29-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein CPU03_RS05250 9aae4844d9adbcf4a95ca019b60c6923 291 Pfam PF00480 ROK family 4 288 1.2E-73 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS05250 9aae4844d9adbcf4a95ca019b60c6923 291 Gene3D G3DSA:3.30.420.40 136 269 5.1E-41 T 29-03-2018 CPU03_RS05250 9aae4844d9adbcf4a95ca019b60c6923 291 SUPERFAMILY SSF53067 1 287 1.88E-54 T 29-03-2018 CPU03_RS05250 9aae4844d9adbcf4a95ca019b60c6923 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS05250 9aae4844d9adbcf4a95ca019b60c6923 291 Gene3D G3DSA:3.30.420.40 1 135 4.4E-25 T 29-03-2018 CPU03_RS02180 80f2e6c9b763cd06f2bda22db182bbb4 195 Pfam PF04224 Protein of unknown function, DUF417 8 178 3.5E-59 T 29-03-2018 IPR007339 Protein of unknown function DUF417 CPU03_RS02180 80f2e6c9b763cd06f2bda22db182bbb4 195 PIRSF PIRSF028065 80 180 4.5E-8 T 29-03-2018 IPR016865 Inner membrane protein RclC CPU03_RS02180 80f2e6c9b763cd06f2bda22db182bbb4 195 PIRSF PIRSF028065 3 68 3.9E-12 T 29-03-2018 IPR016865 Inner membrane protein RclC CPU03_RS03865 2ebae836c301df2db6485fe356cd7069 250 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 10 250 3.0E-44 T 29-03-2018 CPU03_RS04045 27c5cb723097e3e44d04e7eb982d71d1 86 Gene3D G3DSA:3.30.70.20 2 84 1.2E-15 T 29-03-2018 CPU03_RS04045 27c5cb723097e3e44d04e7eb982d71d1 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS04045 27c5cb723097e3e44d04e7eb982d71d1 86 SUPERFAMILY SSF54862 5 68 5.5E-18 T 29-03-2018 CPU03_RS04045 27c5cb723097e3e44d04e7eb982d71d1 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 1.0E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS13035 87606d9f7ca212b243ec8cb90802ef17 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 3.6E-76 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CPU03_RS13035 87606d9f7ca212b243ec8cb90802ef17 184 Pfam PF08534 Redoxin 42 166 2.9E-24 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CPU03_RS13035 87606d9f7ca212b243ec8cb90802ef17 184 Gene3D G3DSA:3.40.30.10 35 184 8.3E-28 T 29-03-2018 CPU03_RS13035 87606d9f7ca212b243ec8cb90802ef17 184 SUPERFAMILY SSF52833 48 175 3.28E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13035 87606d9f7ca212b243ec8cb90802ef17 184 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 SUPERFAMILY SSF55620 1 115 4.95E-37 T 29-03-2018 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 2.6E-38 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 Pfam PF02152 Dihydroneopterin aldolase 4 112 4.9E-31 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.7E-28 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 Gene3D G3DSA:3.30.1130.10 1 120 1.7E-34 T 29-03-2018 CPU03_RS05550 9d56741e6ae7d43af87f51f265876082 121 SMART SM00905 4 114 1.0E-46 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 70 79 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 163 173 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 104 118 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 121 129 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 34 48 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 51 67 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PRINTS PR01171 Bacterial lipocalin signature 136 147 1.5E-37 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 PIRSF PIRSF036893 2 181 3.2E-43 T 29-03-2018 IPR022271 Lipocalin, ApoD type CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 SUPERFAMILY SSF50814 13 177 2.59E-44 T 29-03-2018 IPR012674 Calycin CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 Gene3D G3DSA:2.40.128.20 1 177 8.5E-42 T 29-03-2018 IPR012674 Calycin CPU03_RS03930 fb59e490ba7f312be4bab53e17e46f27 182 Pfam PF08212 Lipocalin-like domain 34 173 9.1E-42 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CPU03_RS14565 f67cc17512b73ac78b18b6cdd111974a 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.43 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS14565 f67cc17512b73ac78b18b6cdd111974a 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.6E-18 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS14565 f67cc17512b73ac78b18b6cdd111974a 56 SUPERFAMILY SSF57829 2 54 3.54E-17 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CPU03_RS14565 f67cc17512b73ac78b18b6cdd111974a 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.1E-18 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 SUPERFAMILY SSF52440 381 511 6.62E-37 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 Pfam PF05257 CHAP domain 52 149 3.9E-11 T 29-03-2018 IPR007921 CHAP domain CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 SUPERFAMILY SSF56059 498 615 1.77E-70 T 29-03-2018 CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 SUPERFAMILY SSF56059 219 380 1.77E-70 T 29-03-2018 CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 616 3.2E-63 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CPU03_RS11960 e862a8c3d781524d4d2ddbcd4bafb3eb 625 SUPERFAMILY SSF54001 10 194 4.02E-59 T 29-03-2018 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 316 9.2E-34 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 286 312 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 117 130 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 47 327 6.4E-142 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Gene3D G3DSA:1.10.601.10 3 162 7.7E-58 T 29-03-2018 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Gene3D G3DSA:1.10.10.10 255 322 4.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Pfam PF04545 Sigma-70, region 4 261 314 2.6E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 SUPERFAMILY SSF88659 224 321 1.66E-23 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 SUPERFAMILY SSF88946 55 163 5.97E-45 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 PRINTS PR00046 Major sigma-70 factor signature 301 312 2.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 PRINTS PR00046 Major sigma-70 factor signature 141 149 2.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 PRINTS PR00046 Major sigma-70 factor signature 286 301 2.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 PRINTS PR00046 Major sigma-70 factor signature 117 130 2.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 PRINTS PR00046 Major sigma-70 factor signature 265 277 2.4E-27 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Pfam PF00140 Sigma-70 factor, region 1.2 55 88 1.2E-11 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Pfam PF04542 Sigma-70 region 2 93 162 6.8E-20 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Gene3D G3DSA:1.10.10.10 163 213 2.8E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 SUPERFAMILY SSF88659 166 240 5.23E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Pfam PF04539 Sigma-70 region 3 173 247 4.8E-20 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10970 676587f749ab5d51e95b33efba9328d6 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 4 327 39.534 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS01975 38adad04723745b462fc8b465d9dc67a 326 SUPERFAMILY SSF53448 8 231 1.06E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS01975 38adad04723745b462fc8b465d9dc67a 326 Gene3D G3DSA:3.90.550.10 2 229 4.4E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS01975 38adad04723745b462fc8b465d9dc67a 326 Pfam PF00535 Glycosyl transferase family 2 11 172 1.3E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS01975 38adad04723745b462fc8b465d9dc67a 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 60.865 T 29-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 SUPERFAMILY SSF75471 1 95 3.92E-31 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-37 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 SMART SM01103 3 86 2.1E-40 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 Gene3D G3DSA:3.30.110.60 2 97 4.4E-29 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.3E-39 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CPU03_RS06065 84347f6e0e71aac3fcc52efaa36a4f0a 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.4E-22 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 Gene3D G3DSA:3.50.50.60 2 73 3.7E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 Gene3D G3DSA:3.30.9.10 178 320 1.3E-38 T 29-03-2018 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 Gene3D G3DSA:3.30.9.10 83 177 2.4E-17 T 29-03-2018 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.0E-28 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 SUPERFAMILY SSF51905 4 260 1.94E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 SUPERFAMILY SSF51905 312 371 1.94E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 SUPERFAMILY SSF54373 226 319 1.96E-6 T 29-03-2018 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 Pfam PF01266 FAD dependent oxidoreductase 5 323 4.0E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CPU03_RS09025 ce39d7cdb83a47085a6d537734a623ed 495 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 483 2.0E-12 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CPU03_RS12175 b627ec39ba1d28bb05866922ea8447a3 66 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 66 20.153 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CPU03_RS12175 b627ec39ba1d28bb05866922ea8447a3 66 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 1.7E-20 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CPU03_RS12175 b627ec39ba1d28bb05866922ea8447a3 66 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 66 27.17 T 29-03-2018 IPR024905 Sec-independent protein translocase protein TatE CPU03_RS12175 b627ec39ba1d28bb05866922ea8447a3 66 Pfam PF02416 mttA/Hcf106 family 4 54 1.2E-12 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CPU03_RS02905 386588b9b529e654fa0ee896bfd4ffa1 359 Pfam PF01594 AI-2E family transporter 20 345 1.5E-76 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 Pfam PF00267 Gram-negative porin 27 390 1.6E-121 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 9.0E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 9.0E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 342 359 9.0E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 9.0E-11 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 263 280 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 294 313 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 7.5E-63 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 Gene3D G3DSA:2.40.160.10 10 390 7.8E-52 T 29-03-2018 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 SUPERFAMILY SSF56935 212 390 2.53E-74 T 29-03-2018 CPU03_RS04375 777465491312dbec987bedd2c3600b05 390 SUPERFAMILY SSF56935 22 177 2.53E-74 T 29-03-2018 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 SMART SM00014 107 218 7.4E-24 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 Pfam PF01569 PAP2 superfamily 123 222 6.4E-16 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PIRSF PIRSF000897 6 239 1.8E-87 T 29-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PRINTS PR00483 Bacterial acid phosphatase class A signature 181 205 2.3E-43 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PRINTS PR00483 Bacterial acid phosphatase class A signature 149 175 2.3E-43 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PRINTS PR00483 Bacterial acid phosphatase class A signature 215 233 2.3E-43 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PRINTS PR00483 Bacterial acid phosphatase class A signature 123 141 2.3E-43 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 PRINTS PR00483 Bacterial acid phosphatase class A signature 60 79 2.3E-43 T 29-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 SUPERFAMILY SSF48317 28 235 1.57E-38 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS01710 60a6bcc543fdfbb4072a53199f19ec09 239 Gene3D G3DSA:1.20.144.10 14 239 3.0E-35 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 SMART SM00938 4 105 6.2E-69 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 SUPERFAMILY SSF54913 1 112 4.45E-47 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 PIRSF PIRSF039144 1 112 3.1E-58 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 Gene3D G3DSA:3.30.70.120 1 108 5.4E-50 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS03985 2fb973a7e0d04e2c3b978d10a6ad4b94 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-44 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 307 2.4E-19 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Gene3D G3DSA:3.40.50.970 1 195 1.2E-41 T 29-03-2018 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 SUPERFAMILY SSF52467 164 340 1.28E-29 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 SUPERFAMILY SSF52518 354 537 3.22E-40 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 SUPERFAMILY SSF52518 2 177 1.13E-40 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 PIRSF PIRSF036565 1 544 1.1E-179 T 29-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 8.0E-30 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 522 1.4E-19 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Gene3D G3DSA:3.40.50.1220 196 334 4.9E-23 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS06480 f135f94e0501df12637cce20fcf63f52 547 Gene3D G3DSA:3.40.50.970 335 538 5.4E-37 T 29-03-2018 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 PIRSF PIRSF000178 2 129 5.9E-30 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 Gene3D G3DSA:1.20.1300.10 2 129 9.4E-24 T 29-03-2018 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 127 2.0E-38 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 SUPERFAMILY SSF81343 3 129 9.97E-34 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 122 1.6E-30 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12510 ad436979dbdd53dd1e95862198e184b9 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 Gene3D G3DSA:3.30.1330.10 1 151 1.5E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 309 4.7E-26 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 Gene3D G3DSA:3.90.650.10 155 319 8.1E-37 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 SUPERFAMILY SSF56042 157 326 3.14E-41 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 48 147 2.8E-17 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 SUPERFAMILY SSF55326 2 151 5.76E-33 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 PIRSF PIRSF005644 1 331 2.6E-120 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CPU03_RS10805 f078c501ee138be10395bbeca72577d8 331 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 1 331 2.3E-135 T 29-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 29-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 Gene3D G3DSA:2.40.10.10 44 76 4.9E-10 T 29-03-2018 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 Gene3D G3DSA:2.40.10.10 199 262 3.6E-8 T 29-03-2018 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 Pfam PF00089 Trypsin 49 247 5.4E-12 T 29-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 PRINTS PR00839 V8 serine protease family signature 230 242 6.7E-17 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 PRINTS PR00839 V8 serine protease family signature 67 84 6.7E-17 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 PRINTS PR00839 V8 serine protease family signature 42 59 6.7E-17 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 PRINTS PR00839 V8 serine protease family signature 176 189 6.7E-17 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 PRINTS PR00839 V8 serine protease family signature 210 226 6.7E-17 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 Gene3D G3DSA:2.40.10.10 77 198 1.8E-8 T 29-03-2018 CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 SUPERFAMILY SSF50494 19 260 4.33E-27 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS16595 f2ac3071c9a4ccf73a72b23859c4de8d 270 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 29-03-2018 IPR033116 Serine proteases, trypsin family, serine active site CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Gene3D G3DSA:3.40.50.720 3 120 2.9E-14 T 29-03-2018 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Gene3D G3DSA:1.10.8.210 151 209 1.8E-20 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.1E-8 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Gene3D G3DSA:3.30.950.10 341 464 1.0E-41 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.011 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 5.1E-69 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Pfam PF13241 Putative NAD(P)-binding 6 115 2.2E-23 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Gene3D G3DSA:3.40.1010.10 215 340 3.4E-35 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 3.2E-50 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 SUPERFAMILY SSF51735 1 112 2.09E-23 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 SUPERFAMILY SSF75615 114 206 7.06E-27 T 29-03-2018 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 SUPERFAMILY SSF53790 212 457 7.2E-81 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 447 1.2E-90 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 PIRSF PIRSF036426 1 465 4.2E-201 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.1E-19 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 Gene3D G3DSA:3.30.160.110 121 148 2.4E-16 T 29-03-2018 CPU03_RS09265 d392a5229d177bf72946257fd698c39b 465 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS08305 a03388ac25fff68d91c96c64a01a4d30 191 Pfam PF08786 DcrB 56 185 1.7E-25 T 29-03-2018 IPR014894 Protein DcrB CPU03_RS08305 a03388ac25fff68d91c96c64a01a4d30 191 Gene3D G3DSA:3.40.1000.10 47 191 1.9E-13 T 29-03-2018 CPU03_RS03660 9b8f594adffda6a413585f577b276c3b 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 432 4.1E-149 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS03660 9b8f594adffda6a413585f577b276c3b 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 364 4.1E-134 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS03660 9b8f594adffda6a413585f577b276c3b 433 PIRSF PIRSF004539 1 433 5.3E-168 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 SUPERFAMILY SSF55194 2 184 1.83E-71 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.3E-79 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.606 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 Pfam PF01765 Ribosome recycling factor 20 183 3.8E-62 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 Gene3D G3DSA:1.10.132.20 75 184 2.2E-37 T 29-03-2018 CPU03_RS04175 f886334e96e41135b68d7c928799528d 185 Gene3D G3DSA:1.10.132.20 2 74 3.2E-10 T 29-03-2018 CPU03_RS14025 9fe9ab5dc44440b4aff5e597aa59bf05 859 SUPERFAMILY SSF141729 57 177 4.32E-19 T 29-03-2018 CPU03_RS14025 9fe9ab5dc44440b4aff5e597aa59bf05 859 Pfam PF00577 Outer membrane usher protein 224 771 1.5E-141 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS14025 9fe9ab5dc44440b4aff5e597aa59bf05 859 Pfam PF13953 PapC C-terminal domain 780 842 1.0E-17 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CPU03_RS14025 9fe9ab5dc44440b4aff5e597aa59bf05 859 Pfam PF13954 PapC N-terminal domain 58 203 2.1E-27 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Gene3D G3DSA:3.30.465.10 72 221 2.1E-48 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Pfam PF01565 FAD binding domain 21 151 2.7E-21 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 333 3.4E-103 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 SUPERFAMILY SSF56194 205 340 5.75E-51 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 1.0E-35 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Gene3D G3DSA:3.90.78.10 224 337 8.7E-41 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 87.428 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 Gene3D G3DSA:3.30.43.10 6 71 2.7E-18 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CPU03_RS07135 120f3b57c8e11b2e85612ead096301fa 345 SUPERFAMILY SSF56176 7 200 5.61E-43 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS00810 aba8679255634c236e15b711e3ff35fc 280 PIRSF PIRSF018249 1 267 7.1E-84 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CPU03_RS00810 aba8679255634c236e15b711e3ff35fc 280 SUPERFAMILY SSF53335 4 249 4.38E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS00810 aba8679255634c236e15b711e3ff35fc 280 Pfam PF13649 Methyltransferase domain 89 156 5.5E-12 T 29-03-2018 CPU03_RS00810 aba8679255634c236e15b711e3ff35fc 280 Gene3D G3DSA:3.40.50.150 1 268 5.9E-55 T 29-03-2018 CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 2.2E-77 T 29-03-2018 IPR019903 Repair of iron centres family CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 4.5E-28 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 52.434 T 29-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 5.4E-20 T 29-03-2018 IPR019903 Repair of iron centres family CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 Gene3D G3DSA:1.10.3910.10 3 60 6.3E-11 T 29-03-2018 CPU03_RS06185 7e6c500cb862235c3af8b1f957c4a3a5 221 Gene3D G3DSA:1.20.120.520 61 219 5.8E-31 T 29-03-2018 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 6.1E-70 T 29-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 SUPERFAMILY SSF53681 118 229 1.28E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 Gene3D G3DSA:3.40.50.1860 118 215 3.4E-27 T 29-03-2018 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 SUPERFAMILY SSF53681 1 116 2.07E-33 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.0E-59 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS00625 0896d54aa3f64d539d0ef7cb6c624232 230 Gene3D G3DSA:3.40.50.1860 1 117 2.8E-31 T 29-03-2018 CPU03_RS12165 c475cfb5058b44f50ef2dece9de7c44d 305 PRINTS PR00069 Aldo-keto reductase signature 101 119 4.9E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS12165 c475cfb5058b44f50ef2dece9de7c44d 305 PRINTS PR00069 Aldo-keto reductase signature 132 149 4.9E-6 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS12165 c475cfb5058b44f50ef2dece9de7c44d 305 Pfam PF00248 Aldo/keto reductase family 16 297 3.9E-50 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS12165 c475cfb5058b44f50ef2dece9de7c44d 305 SUPERFAMILY SSF51430 1 299 1.11E-71 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS12165 c475cfb5058b44f50ef2dece9de7c44d 305 Gene3D G3DSA:3.20.20.100 1 303 5.8E-70 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 Gene3D G3DSA:1.10.10.10 3 88 8.1E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 SUPERFAMILY SSF46785 4 85 7.71E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 Gene3D G3DSA:1.20.5.170 188 217 0.0013 T 29-03-2018 CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 Gene3D G3DSA:1.10.10.10 98 172 8.1E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 Pfam PF04337 Protein of unknown function, DUF480 6 159 3.3E-63 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 SUPERFAMILY SSF46785 91 172 4.49E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS01510 8a06719e6c82378aa0c6055155fede36 218 Hamap MF_01584 UPF0502 protein YceH [yceH]. 6 216 35.686 T 29-03-2018 IPR007432 Protein of unknown function DUF480 CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 PRINTS PR00160 Glutaredoxin signature 4 22 1.7E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 PRINTS PR00160 Glutaredoxin signature 60 73 1.7E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 PRINTS PR00160 Glutaredoxin signature 46 59 1.7E-17 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 Pfam PF00462 Glutaredoxin 4 63 1.0E-24 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 Gene3D G3DSA:3.40.30.10 2 82 3.2E-28 T 29-03-2018 CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 SUPERFAMILY SSF52833 1 82 1.05E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS08375 44e98648ec253e2e280d9c9d2976313d 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 8.5E-36 T 29-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CPU03_RS00190 b9ee1ae225b2e150c22a378ffce008e9 530 Pfam PF05136 Phage portal protein, lambda family 29 400 5.2E-93 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CPU03_RS00190 b9ee1ae225b2e150c22a378ffce008e9 530 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 27 510 9.1E-169 T 29-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CPU03_RS04060 f8c637a80a03ac3e2195d719bf2b0671 182 PIRSF PIRSF011484 1 180 1.2E-68 T 29-03-2018 IPR009822 YaeQ CPU03_RS04060 f8c637a80a03ac3e2195d719bf2b0671 182 SUPERFAMILY SSF52980 4 178 1.47E-72 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CPU03_RS04060 f8c637a80a03ac3e2195d719bf2b0671 182 SMART SM01322 1 176 6.1E-119 T 29-03-2018 IPR009822 YaeQ CPU03_RS04060 f8c637a80a03ac3e2195d719bf2b0671 182 Gene3D G3DSA:3.10.640.10 2 177 8.3E-79 T 29-03-2018 CPU03_RS04060 f8c637a80a03ac3e2195d719bf2b0671 182 Pfam PF07152 YaeQ protein 1 173 4.8E-76 T 29-03-2018 IPR009822 YaeQ CPU03_RS06870 41989140de724170b1a63a713f89048e 283 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 6 281 4.2E-108 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CPU03_RS06870 41989140de724170b1a63a713f89048e 283 Pfam PF01040 UbiA prenyltransferase family 24 266 2.3E-66 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CPU03_RS06870 41989140de724170b1a63a713f89048e 283 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 63 85 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site CPU03_RS06870 41989140de724170b1a63a713f89048e 283 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 29.185 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 SUPERFAMILY SSF53187 322 406 1.5E-82 T 29-03-2018 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 SUPERFAMILY SSF53187 1 209 1.5E-82 T 29-03-2018 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 2.8E-158 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 PIRSF PIRSF037215 1 408 1.4E-182 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.457 T 29-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 Gene3D G3DSA:3.40.630.10 1 408 6.2E-51 T 29-03-2018 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 SUPERFAMILY SSF55031 208 320 4.66E-42 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 Pfam PF01546 Peptidase family M20/M25/M40 139 401 6.3E-16 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS00525 4197e2b3d778d85ec79167fc00064713 411 Pfam PF07687 Peptidase dimerisation domain 206 301 4.7E-10 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS02945 12e315dc7a3f9c9342311fc0c6d9a6c8 183 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 3.1E-21 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS02945 12e315dc7a3f9c9342311fc0c6d9a6c8 183 Gene3D G3DSA:3.40.630.30 5 174 8.8E-35 T 29-03-2018 CPU03_RS02945 12e315dc7a3f9c9342311fc0c6d9a6c8 183 SUPERFAMILY SSF55729 4 164 2.84E-41 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS16465 d0990dee0be3c80f9837556b6905794c 496 Gene3D G3DSA:3.60.60.10 19 441 7.1E-38 T 29-03-2018 CPU03_RS16465 d0990dee0be3c80f9837556b6905794c 496 Pfam PF03577 Peptidase family C69 21 422 1.9E-107 T 29-03-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 CPU03_RS12515 06e3ad6b369c8421991ccd3c2bbabbac 115 Gene3D G3DSA:1.20.1300.10 1 115 3.2E-18 T 29-03-2018 CPU03_RS12515 06e3ad6b369c8421991ccd3c2bbabbac 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 104 6.5E-6 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12515 06e3ad6b369c8421991ccd3c2bbabbac 115 SUPERFAMILY SSF81343 5 115 3.11E-29 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS12515 06e3ad6b369c8421991ccd3c2bbabbac 115 PIRSF PIRSF000169 1 115 4.4E-40 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CPU03_RS12515 06e3ad6b369c8421991ccd3c2bbabbac 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.6E-35 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CPU03_RS06240 49af5f851022bb7ca5b60c18bfb12559 103 Gene3D G3DSA:3.30.1660.10 36 103 1.1E-18 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS06240 49af5f851022bb7ca5b60c18bfb12559 103 SUPERFAMILY SSF159871 7 103 3.53E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS06240 49af5f851022bb7ca5b60c18bfb12559 103 Pfam PF07338 Protein of unknown function (DUF1471) 48 103 6.1E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS12465 219b3020abd3cd7af70b1737d52b20cd 317 PIRSF PIRSF037004 1 317 8.9E-128 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CPU03_RS12465 219b3020abd3cd7af70b1737d52b20cd 317 Pfam PF08349 Protein of unknown function (DUF1722) 191 308 2.0E-43 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 CPU03_RS12465 219b3020abd3cd7af70b1737d52b20cd 317 Pfam PF04463 Protein of unknown function (DUF523) 7 148 7.0E-35 T 29-03-2018 IPR007553 Domain of unknown function DUF523 CPU03_RS08725 3394919086ae087c2b3af5e36085d602 309 Gene3D G3DSA:3.40.1190.20 1 309 1.8E-53 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS08725 3394919086ae087c2b3af5e36085d602 309 SUPERFAMILY SSF53613 2 303 1.12E-71 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS08725 3394919086ae087c2b3af5e36085d602 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS08725 3394919086ae087c2b3af5e36085d602 309 Pfam PF00294 pfkB family carbohydrate kinase 4 303 2.2E-64 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 SUPERFAMILY SSF51569 5 291 1.15E-82 T 29-03-2018 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 296 2.4E-155 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 50.681 T 29-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 PIRSF PIRSF001365 1 298 5.0E-82 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.6E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.6E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 4.6E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.6E-21 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 Gene3D G3DSA:3.20.20.70 3 297 2.1E-83 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 SMART SM01130 4 293 7.2E-90 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS15300 92b06062f651f56b92cd58684c4cb982 298 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.2E-106 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 SUPERFAMILY SSF100950 33 234 5.93E-73 T 29-03-2018 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 PIRSF PIRSF009451 1 506 1.6E-257 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 Gene3D G3DSA:3.40.1080.10 237 480 1.2E-34 T 29-03-2018 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 39 504 3.2E-257 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 29 506 1.1E-234 T 29-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 SUPERFAMILY SSF100950 238 504 8.37E-60 T 29-03-2018 CPU03_RS06835 c46147522161b3cf3b5a3118beea8031 506 Gene3D G3DSA:3.40.1080.10 1 235 4.2E-49 T 29-03-2018 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 Gene3D G3DSA:3.40.50.300 3 195 2.5E-60 T 29-03-2018 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 29.902 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 294 2.2E-114 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 Gene3D G3DSA:1.10.287.890 202 284 3.5E-24 T 29-03-2018 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 Pfam PF01715 IPP transferase 41 286 5.6E-85 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CPU03_RS06300 f6bd62ff7e3409ff61fe9332782272d3 311 SUPERFAMILY SSF52540 8 151 6.32E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 SUPERFAMILY SSF51430 7 266 1.13E-83 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PIRSF PIRSF000097 2 115 1.2E-39 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PIRSF PIRSF000097 113 272 7.9E-45 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.2E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.2E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.2E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.2E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.2E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 Gene3D G3DSA:3.20.20.100 4 274 3.9E-88 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CPU03_RS09670 b9682c9e928d50dc3c6d941437abc2a7 276 Pfam PF00248 Aldo/keto reductase family 18 260 2.5E-42 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 5 125 2.2E-34 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 4 125 3.3E-47 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 Gene3D G3DSA:3.90.470.20 1 127 2.8E-37 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 2.0E-33 T 29-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.5 T 29-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 2.8E-23 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS11780 9ac09942a4bd2fcf3b756cf79e962c56 127 SUPERFAMILY SSF56214 4 125 8.76E-30 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CPU03_RS10585 38af4c6a313b662825a7eb95bbd7c56b 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 34.843 T 29-03-2018 IPR023771 Cell division protein ZapA, eubacteria CPU03_RS10585 38af4c6a313b662825a7eb95bbd7c56b 109 SUPERFAMILY SSF102829 6 94 7.32E-24 T 29-03-2018 IPR007838 Cell division protein ZapA-like CPU03_RS10585 38af4c6a313b662825a7eb95bbd7c56b 109 Pfam PF05164 Cell division protein ZapA 6 90 4.1E-18 T 29-03-2018 IPR007838 Cell division protein ZapA-like CPU03_RS17000 873a0c65722f319144004e2c3c2a2047 183 Gene3D G3DSA:2.60.40.1090 27 183 8.9E-8 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS17000 873a0c65722f319144004e2c3c2a2047 183 PIRSF PIRSF002967 3 183 1.3E-97 T 29-03-2018 IPR016372 K88 fimbrial protein A CPU03_RS17000 873a0c65722f319144004e2c3c2a2047 183 SUPERFAMILY SSF49401 30 183 4.03E-7 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.852 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 SUPERFAMILY SSF55811 6 151 3.52E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 Gene3D G3DSA:3.90.79.10 1 164 8.2E-36 T 29-03-2018 CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.2E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.2E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS10925 87fc7a89e8b1947b45269ff146a36c11 177 Pfam PF00293 NUDIX domain 7 146 1.3E-27 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 Gene3D G3DSA:3.40.50.300 2 233 3.1E-40 T 29-03-2018 CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 SUPERFAMILY SSF52540 19 226 5.01E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 5 253 43.972 T 29-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 SMART SM00382 26 215 3.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS16765 26d313f2df8c97e97e609165265f6f3e 255 Pfam PF00005 ABC transporter 21 166 6.4E-19 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS11395 79c66693834986bc94ba907df4aeed23 201 Gene3D G3DSA:3.90.10.10 27 86 1.8E-4 T 29-03-2018 CPU03_RS11395 79c66693834986bc94ba907df4aeed23 201 SUPERFAMILY SSF48695 44 174 4.8E-23 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS11395 79c66693834986bc94ba907df4aeed23 201 Gene3D G3DSA:3.90.10.10 87 175 1.1E-12 T 29-03-2018 CPU03_RS11395 79c66693834986bc94ba907df4aeed23 201 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 140 174 1.1E-4 T 29-03-2018 IPR010177 Doubled CXXCH motif CPU03_RS11395 79c66693834986bc94ba907df4aeed23 201 Pfam PF13435 Cytochrome c554 and c-prime 36 85 0.0014 T 29-03-2018 IPR023155 Cytochrome c-552/4 CPU03_RS16975 25ac6ecebbcfe22e6498e43fbcf9a4c1 284 Pfam PF02432 Fimbrial, major and minor subunit 29 283 3.2E-12 T 29-03-2018 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 CPU03_RS03750 3dd5497ba417804c6eaaeb3466ae5c8d 443 Pfam PF01490 Transmembrane amino acid transporter protein 25 441 1.4E-6 T 29-03-2018 IPR013057 Amino acid transporter, transmembrane domain CPU03_RS03750 3dd5497ba417804c6eaaeb3466ae5c8d 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 48.495 T 29-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 CPU03_RS07220 888a3bf42b214dda22102393b0bae36f 178 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 175 19.419 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CPU03_RS07220 888a3bf42b214dda22102393b0bae36f 178 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.4E-32 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CPU03_RS07220 888a3bf42b214dda22102393b0bae36f 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CPU03_RS07220 888a3bf42b214dda22102393b0bae36f 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CPU03_RS07220 888a3bf42b214dda22102393b0bae36f 178 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.0E-33 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 SUPERFAMILY SSF52440 2 75 3.6E-14 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 SUPERFAMILY SSF51246 279 353 3.22E-16 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 326 31.855 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 Gene3D G3DSA:3.30.470.20 156 336 1.6E-27 T 29-03-2018 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 327 1.4E-103 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 Pfam PF02222 ATP-grasp domain 88 255 1.8E-52 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 Gene3D G3DSA:3.40.50.20 1 69 8.5E-13 T 29-03-2018 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 SUPERFAMILY SSF56059 79 274 1.5E-54 T 29-03-2018 CPU03_RS11860 4b9eae4794fba9051575f33d66e4f728 356 Gene3D G3DSA:3.30.1490.20 94 155 1.9E-10 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS06115 edb7608da97cb6a3517b2ff8ce1233a3 94 SUPERFAMILY SSF47413 3 72 4.13E-28 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS06115 edb7608da97cb6a3517b2ff8ce1233a3 94 Gene3D G3DSA:1.10.260.40 1 74 1.0E-15 T 29-03-2018 CPU03_RS06115 edb7608da97cb6a3517b2ff8ce1233a3 94 Pfam PF13693 Winged helix-turn-helix DNA-binding 8 82 2.4E-35 T 29-03-2018 CPU03_RS15365 3f5911bad5f54e6783bc79989fb0c63e 286 SUPERFAMILY SSF53213 12 279 7.72E-52 T 29-03-2018 CPU03_RS15365 3f5911bad5f54e6783bc79989fb0c63e 286 Gene3D G3DSA:3.40.830.10 2 276 5.5E-54 T 29-03-2018 CPU03_RS15365 3f5911bad5f54e6783bc79989fb0c63e 286 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.1E-80 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CPU03_RS15365 3f5911bad5f54e6783bc79989fb0c63e 286 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 2.2E-155 T 29-03-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 CPU03_RS14250 3e99883421d7a718d89bde78c58b0d80 225 SUPERFAMILY SSF52540 6 223 2.5E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14250 3e99883421d7a718d89bde78c58b0d80 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.085 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CPU03_RS14250 3e99883421d7a718d89bde78c58b0d80 225 Gene3D G3DSA:3.40.50.300 5 224 9.8E-53 T 29-03-2018 CPU03_RS14250 3e99883421d7a718d89bde78c58b0d80 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 6.4E-91 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CPU03_RS14250 3e99883421d7a718d89bde78c58b0d80 225 Pfam PF02224 Cytidylate kinase 8 221 3.2E-80 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 5.7E-154 T 29-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.607 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Gene3D G3DSA:3.40.50.2030 235 375 3.9E-64 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 PIRSF PIRSF000076 1 550 2.3E-233 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 4.8E-231 T 29-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Gene3D G3DSA:1.20.1270.20 1 144 4.3E-32 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Gene3D G3DSA:1.20.1270.20 150 232 3.0E-18 T 29-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 Gene3D G3DSA:3.40.50.2030 376 551 3.9E-59 T 29-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CPU03_RS14065 40b53a0c9be0b578b4b3dbf4b351f37f 551 SUPERFAMILY SSF56821 1 547 1.44E-184 T 29-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CPU03_RS03870 e1f66dd281de27b00b6fdfadbc740bd1 80 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.0E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 395 2.1E-77 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 Gene3D G3DSA:3.20.140.10 1 401 1.2E-104 T 29-03-2018 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 3.8E-159 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.277 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 SUPERFAMILY SSF54675 3 137 6.83E-42 T 29-03-2018 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 PIRSF PIRSF000484 1 380 7.4E-59 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CPU03_RS02155 ad1142f9b982fe822a3941fe7be8baf3 401 SUPERFAMILY SSF51690 120 393 7.06E-87 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CPU03_RS05935 61c6446b51d0fc7fc6826b606f5662ac 214 SMART SM00859 2 100 0.0039 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS05935 61c6446b51d0fc7fc6826b606f5662ac 214 SUPERFAMILY SSF51735 1 195 5.07E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS05935 61c6446b51d0fc7fc6826b606f5662ac 214 Pfam PF13460 NAD(P)H-binding 7 192 7.5E-7 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS05935 61c6446b51d0fc7fc6826b606f5662ac 214 Gene3D G3DSA:3.40.50.720 1 214 2.4E-19 T 29-03-2018 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 398 2.8E-183 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 Gene3D G3DSA:3.30.420.40 198 399 2.7E-76 T 29-03-2018 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 190.551 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 Gene3D G3DSA:3.30.420.40 4 197 7.8E-67 T 29-03-2018 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PIRSF PIRSF000722 1 399 4.3E-144 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 379 391 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 5 16 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 175 188 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 324 340 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 205 226 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 PRINTS PR00471 Acetate kinase family signature 301 314 5.4E-48 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 Pfam PF00871 Acetokinase family 5 392 1.5E-176 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 SUPERFAMILY SSF53067 159 397 9.26E-85 T 29-03-2018 CPU03_RS13245 fd6f6e99c84406bc2a50c4d7e6f9f417 399 SUPERFAMILY SSF53067 3 198 4.14E-63 T 29-03-2018 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 SMART SM00448 4 115 3.9E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Pfam PF00158 Sigma-54 interaction domain 141 308 1.8E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 SUPERFAMILY SSF52172 2 186 1.12E-46 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Gene3D G3DSA:3.40.50.2300 2 136 3.1E-37 T 29-03-2018 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 3.1E-15 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Pfam PF00072 Response regulator receiver domain 6 115 3.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.0E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 2.0E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 SUPERFAMILY SSF52540 140 383 8.75E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Gene3D G3DSA:1.10.8.60 314 380 8.0E-24 T 29-03-2018 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 2.4E-241 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Gene3D G3DSA:1.10.10.60 381 471 2.5E-20 T 29-03-2018 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 Gene3D G3DSA:3.40.50.300 137 313 1.2E-28 T 29-03-2018 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 SMART SM00382 161 312 4.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS07885 00671c6271520acc171e7515dfde818a 471 SUPERFAMILY SSF46689 381 471 1.08E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS05175 80e18998bb6d9f13bfd8a08a512ba659 128 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 15 127 4.5E-42 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CPU03_RS05175 80e18998bb6d9f13bfd8a08a512ba659 128 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.041 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CPU03_RS05175 80e18998bb6d9f13bfd8a08a512ba659 128 Pfam PF02021 Uncharacterised protein family UPF0102 24 115 4.8E-25 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 CPU03_RS05175 80e18998bb6d9f13bfd8a08a512ba659 128 SUPERFAMILY SSF52980 18 125 3.33E-22 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CPU03_RS05175 80e18998bb6d9f13bfd8a08a512ba659 128 Gene3D G3DSA:3.40.1350.10 22 128 4.5E-34 T 29-03-2018 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Pfam PF00364 Biotin-requiring enzyme 5 76 1.0E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Pfam PF02817 e3 binding domain 114 147 4.8E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Gene3D G3DSA:3.90.1170.30 1 48 5.4E-13 T 29-03-2018 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 2.7E-82 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Gene3D G3DSA:3.30.559.10 163 403 7.2E-91 T 29-03-2018 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 SUPERFAMILY SSF51230 2 85 7.2E-23 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 Gene3D G3DSA:4.10.320.10 105 162 1.7E-17 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 1.0E-181 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 SUPERFAMILY SSF47005 106 151 8.76E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CPU03_RS12535 47e18dbd4c878014a67f85de8b7f173f 405 SUPERFAMILY SSF52777 174 404 2.67E-89 T 29-03-2018 CPU03_RS09185 fd2b4b58cfb6f352629f4da8a3f7b7a4 138 PIRSF PIRSF016821 11 138 1.2E-43 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CPU03_RS09185 fd2b4b58cfb6f352629f4da8a3f7b7a4 138 SUPERFAMILY SSF55174 13 108 1.44E-29 T 29-03-2018 CPU03_RS09185 fd2b4b58cfb6f352629f4da8a3f7b7a4 138 Gene3D G3DSA:3.10.290.10 7 110 2.5E-26 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS09185 fd2b4b58cfb6f352629f4da8a3f7b7a4 138 Pfam PF01479 S4 domain 14 60 2.1E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS09185 fd2b4b58cfb6f352629f4da8a3f7b7a4 138 SMART SM00363 14 77 6.6E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS03410 5cb48e13c29e665c1b45b91af59e175c 251 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS03410 5cb48e13c29e665c1b45b91af59e175c 251 Pfam PF00005 ABC transporter 20 165 1.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS03410 5cb48e13c29e665c1b45b91af59e175c 251 SUPERFAMILY SSF52540 3 226 7.56E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03410 5cb48e13c29e665c1b45b91af59e175c 251 SMART SM00382 29 210 7.7E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS03410 5cb48e13c29e665c1b45b91af59e175c 251 Gene3D G3DSA:3.40.50.300 1 237 8.2E-59 T 29-03-2018 CPU03_RS12785 8eb3b1806432540ba674176d67e8742c 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 2.4E-47 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS12785 8eb3b1806432540ba674176d67e8742c 165 SUPERFAMILY SSF52728 5 162 6.02E-48 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS12785 8eb3b1806432540ba674176d67e8742c 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 154 8.7E-53 T 29-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CPU03_RS12785 8eb3b1806432540ba674176d67e8742c 165 Gene3D G3DSA:3.40.35.10 5 163 7.7E-54 T 29-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CPU03_RS00290 01b0c46a97f7f0020c40e669f810194d 302 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 198 255 9.3E-12 T 29-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CPU03_RS00290 01b0c46a97f7f0020c40e669f810194d 302 Pfam PF13730 Helix-turn-helix domain 19 67 9.4E-7 T 29-03-2018 CPU03_RS00290 01b0c46a97f7f0020c40e669f810194d 302 Gene3D G3DSA:1.10.10.10 16 232 5.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 Pfam PF11412 Disulphide bond corrector protein DsbC 34 143 8.4E-16 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 Gene3D G3DSA:3.40.30.10 548 650 3.8E-8 T 29-03-2018 CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 ProSitePatterns PS00194 Thioredoxin family active site. 576 594 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 Gene3D G3DSA:3.40.50.720 18 318 0.0013 T 29-03-2018 CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 SUPERFAMILY SSF52833 552 663 3.3E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13135 ddfd4450a93997e530e3c67d53438ac9 669 Pfam PF13899 Thioredoxin-like 557 642 1.1E-13 T 29-03-2018 CPU03_RS04535 876576e736ef0bed4ebab3df60a68a45 222 Pfam PF04391 Protein of unknown function (DUF533) 30 208 5.9E-54 T 29-03-2018 IPR007486 Inner membrane protein YebE CPU03_RS04535 876576e736ef0bed4ebab3df60a68a45 222 SUPERFAMILY SSF158682 69 211 3.14E-21 T 29-03-2018 CPU03_RS04535 876576e736ef0bed4ebab3df60a68a45 222 Gene3D G3DSA:1.10.3680.10 74 221 3.6E-18 T 29-03-2018 IPR029024 TerB-like CPU03_RS12680 509ae9b18221c12c01c57858735342dc 47 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 17.819 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CPU03_RS12680 509ae9b18221c12c01c57858735342dc 47 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 46 8.5E-29 T 29-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CPU03_RS08785 57a904c2410d300b72532d06d969c3e0 249 SUPERFAMILY SSF53335 5 246 3.87E-74 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08785 57a904c2410d300b72532d06d969c3e0 249 Gene3D G3DSA:3.40.50.150 57 248 3.0E-32 T 29-03-2018 CPU03_RS08785 57a904c2410d300b72532d06d969c3e0 249 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 3.5E-107 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CPU03_RS08785 57a904c2410d300b72532d06d969c3e0 249 Gene3D G3DSA:3.40.1630.10 3 56 2.5E-23 T 29-03-2018 CPU03_RS08785 57a904c2410d300b72532d06d969c3e0 249 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 38.424 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 Pfam PF07670 Nucleoside recognition 354 444 4.7E-12 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 Pfam PF07670 Nucleoside recognition 513 690 1.8E-35 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 1.0E-21 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 Pfam PF02421 Ferrous iron transport protein B 5 163 1.2E-64 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 Gene3D G3DSA:3.40.50.300 1 291 3.2E-34 T 29-03-2018 CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 SUPERFAMILY SSF52540 4 164 3.28E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09120 68fc7bb4064a077c31a6bf9b5b78cf2c 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 2.5E-228 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CPU03_RS11420 44a9cb089d6a66fb4924f399478e8f37 194 Gene3D G3DSA:1.25.40.10 109 192 1.7E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11420 44a9cb089d6a66fb4924f399478e8f37 194 Gene3D G3DSA:1.25.40.10 30 108 3.2E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11420 44a9cb089d6a66fb4924f399478e8f37 194 SUPERFAMILY SSF48452 60 167 1.94E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS11420 44a9cb089d6a66fb4924f399478e8f37 194 SMART SM00028 139 172 200.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS11420 44a9cb089d6a66fb4924f399478e8f37 194 SMART SM00028 68 101 0.03 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS05545 716b5a98e0ed0299b8ed95d682df24f4 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 264 4.4E-100 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CPU03_RS05545 716b5a98e0ed0299b8ed95d682df24f4 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 271 18.885 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CPU03_RS05545 716b5a98e0ed0299b8ed95d682df24f4 272 Pfam PF02673 Bacitracin resistance protein BacA 9 265 3.9E-87 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CPU03_RS16940 574a212468c2dfddd32dbbac86d7aa10 138 Gene3D G3DSA:3.40.50.1010 1 138 2.1E-24 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS16940 574a212468c2dfddd32dbbac86d7aa10 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 11.003 T 29-03-2018 IPR022907 VapC family GO:0004540 CPU03_RS16940 574a212468c2dfddd32dbbac86d7aa10 138 Pfam PF01850 PIN domain 5 130 1.4E-12 T 29-03-2018 IPR002716 PIN domain CPU03_RS16940 574a212468c2dfddd32dbbac86d7aa10 138 SUPERFAMILY SSF88723 3 136 1.57E-30 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 Pfam PF03466 LysR substrate binding domain 88 290 9.3E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.2E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 Gene3D G3DSA:1.10.10.10 4 80 2.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 SUPERFAMILY SSF46785 6 88 3.94E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 Gene3D G3DSA:3.40.190.10 183 264 2.2E-9 T 29-03-2018 CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 Gene3D G3DSA:3.40.190.10 81 182 5.0E-12 T 29-03-2018 CPU03_RS16220 be6307fd96a1b9f3f1c9044263c60127 304 SUPERFAMILY SSF53850 88 291 6.88E-29 T 29-03-2018 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.0E-154 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 7.8E-49 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 3.3E-49 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 SUPERFAMILY SSF51735 162 315 2.96E-34 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 SUPERFAMILY SSF69075 317 418 8.5E-27 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 SUPERFAMILY SSF69742 1 158 5.49E-47 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Gene3D G3DSA:3.40.50.720 161 315 3.0E-23 T 29-03-2018 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 PIRSF PIRSF000445 1 420 1.1E-154 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Gene3D G3DSA:1.10.1200.70 332 418 4.9E-24 T 29-03-2018 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 2.3E-24 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.683 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS01610 d2d0c4badf4036e26621285e540a9e0d 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CPU03_RS10335 eccbe8bf2af18ee9a6404769e26d54f3 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 5.0E-220 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CPU03_RS10335 eccbe8bf2af18ee9a6404769e26d54f3 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CPU03_RS10335 eccbe8bf2af18ee9a6404769e26d54f3 597 Gene3D G3DSA:1.10.645.10 13 582 9.4E-193 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10335 eccbe8bf2af18ee9a6404769e26d54f3 597 SUPERFAMILY SSF56762 12 582 1.44E-167 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10335 eccbe8bf2af18ee9a6404769e26d54f3 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.2E-63 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.2E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.2E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.2E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 Pfam PF00364 Biotin-requiring enzyme 81 154 7.2E-27 T 29-03-2018 IPR000089 Biotin/lipoyl attachment CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 Gene3D G3DSA:2.40.50.100 4 155 1.3E-21 T 29-03-2018 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CPU03_RS09855 e876ffba61f6998d48fc13b95499ee7a 155 SUPERFAMILY SSF51230 80 155 1.02E-26 T 29-03-2018 IPR011053 Single hybrid motif CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Gene3D G3DSA:3.30.70.20 21 46 1.5E-4 T 29-03-2018 CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Gene3D G3DSA:3.30.70.20 102 140 1.8E-19 T 29-03-2018 CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Gene3D G3DSA:3.30.70.20 141 207 6.5E-13 T 29-03-2018 CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 SUPERFAMILY SSF54862 32 186 3.93E-48 T 29-03-2018 CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Pfam PF13247 4Fe-4S dicluster domain 84 177 4.3E-21 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Gene3D G3DSA:3.30.70.20 47 101 5.9E-13 T 29-03-2018 CPU03_RS09175 4e5616c3f5754ff7ca5ec95b67b37484 212 Pfam PF12800 4Fe-4S binding domain 40 54 0.016 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PIRSF PIRSF000350 1 469 3.6E-84 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 Gene3D G3DSA:3.50.50.60 2 167 4.1E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.4E-40 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.4E-40 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.4E-40 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.4E-40 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.4E-40 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 SUPERFAMILY SSF55424 344 467 1.15E-38 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 Gene3D G3DSA:3.40.50.720 168 337 1.4E-28 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 Gene3D G3DSA:3.30.390.30 338 463 1.8E-37 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 461 7.5E-148 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.1E-68 T 29-03-2018 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 7.0E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 SUPERFAMILY SSF51905 1 338 1.36E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 3.2E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS04550 7fc632179c2c7702f3168ace43dca6d9 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 Gene3D G3DSA:3.40.50.10490 13 241 1.2E-53 T 29-03-2018 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 Gene3D G3DSA:1.10.8.10 242 271 3.8E-11 T 29-03-2018 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 Gene3D G3DSA:1.10.8.10 272 298 4.5E-4 T 29-03-2018 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 6.3E-131 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 SUPERFAMILY SSF53697 7 251 3.34E-72 T 29-03-2018 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 Pfam PF13580 SIS domain 43 167 5.4E-10 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 29-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CPU03_RS06700 4745414e146f37bce40ffe5ffc7a53e8 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.213 T 29-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CPU03_RS09870 5ad9708da27816ef6a8af1e3351bffff 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 266 1.0E-28 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS09870 5ad9708da27816ef6a8af1e3351bffff 333 Gene3D G3DSA:3.90.420.10 63 333 8.4E-62 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS09870 5ad9708da27816ef6a8af1e3351bffff 333 SUPERFAMILY SSF56524 73 329 1.96E-92 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS09870 5ad9708da27816ef6a8af1e3351bffff 333 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 333 55.367 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CPU03_RS11875 2f025d03e17df9061fe69ebf643d3f80 244 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 233 1.1E-105 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CPU03_RS11875 2f025d03e17df9061fe69ebf643d3f80 244 Gene3D G3DSA:3.60.21.10 1 240 8.4E-23 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS11875 2f025d03e17df9061fe69ebf643d3f80 244 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 242 125.907 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CPU03_RS11875 2f025d03e17df9061fe69ebf643d3f80 244 Pfam PF00149 Calcineurin-like phosphoesterase 3 199 4.0E-9 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CPU03_RS11875 2f025d03e17df9061fe69ebf643d3f80 244 SUPERFAMILY SSF56300 1 230 7.6E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS08840 321776891d34e3902dde35a8902a1097 145 SUPERFAMILY SSF52402 3 139 3.52E-31 T 29-03-2018 CPU03_RS08840 321776891d34e3902dde35a8902a1097 145 Gene3D G3DSA:3.40.50.620 2 142 9.0E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS08840 321776891d34e3902dde35a8902a1097 145 Pfam PF00582 Universal stress protein family 3 138 4.5E-20 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS08840 321776891d34e3902dde35a8902a1097 145 PIRSF PIRSF006276 1 141 4.6E-53 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 SMART SM00861 319 484 1.1E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 6.2E-26 T 29-03-2018 IPR033248 Transketolase, C-terminal domain CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 616 3.2E-302 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.3E-38 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Gene3D G3DSA:3.40.50.920 495 620 2.0E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Gene3D G3DSA:3.40.50.970 3 297 2.9E-78 T 29-03-2018 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 SUPERFAMILY SSF52518 318 504 1.33E-54 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 SUPERFAMILY SSF52518 8 199 5.59E-78 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 SUPERFAMILY SSF52518 243 381 5.59E-78 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.033 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 2.4E-119 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 Gene3D G3DSA:3.40.50.970 298 485 4.4E-62 T 29-03-2018 CPU03_RS03430 c1ea9d29e3045a262e20b495f4966937 621 SUPERFAMILY SSF52922 492 614 6.41E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CPU03_RS10520 3b3cb3931c19705abad6b55f9714c62a 539 Pfam PF00884 Sulfatase 43 370 4.4E-51 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS10520 3b3cb3931c19705abad6b55f9714c62a 539 Pfam PF16347 Domain of unknown function (DUF4976) 374 466 6.0E-16 T 29-03-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096 CPU03_RS10520 3b3cb3931c19705abad6b55f9714c62a 539 Gene3D G3DSA:3.40.720.10 43 403 5.6E-75 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS10520 3b3cb3931c19705abad6b55f9714c62a 539 Gene3D G3DSA:3.30.1120.10 404 488 2.0E-18 T 29-03-2018 CPU03_RS10520 3b3cb3931c19705abad6b55f9714c62a 539 SUPERFAMILY SSF53649 43 468 4.76E-104 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 10 410 36.996 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 Pfam PF01566 Natural resistance-associated macrophage protein 39 384 2.2E-123 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 21 378 1.5E-97 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 98 124 8.3E-30 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 300 319 8.3E-30 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 201 224 8.3E-30 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 151 172 8.3E-30 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS02605 15ba86824bc54e1dda423b9f762264aa 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 126 145 8.3E-30 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 3.3E-49 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 PIRSF PIRSF009393 2 720 1.5E-287 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 SUPERFAMILY SSF53383 109 567 2.49E-121 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Gene3D G3DSA:3.40.50.220 3 108 2.8E-31 T 29-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Gene3D G3DSA:3.40.640.10 109 420 4.0E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 6.5E-193 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Gene3D G3DSA:3.90.1150.10 421 600 4.1E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 29-03-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 1.2E-17 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 Gene3D G3DSA:3.90.100.10 601 721 9.1E-37 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 SUPERFAMILY SSF55904 571 719 7.06E-48 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS10325 f87f65b1dc6d4e2b8dc015b5e6773d45 721 SUPERFAMILY SSF52172 1 108 1.94E-27 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 Pfam PF13416 Bacterial extracellular solute-binding protein 46 312 5.6E-40 T 29-03-2018 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 Gene3D G3DSA:3.40.190.10 149 304 2.0E-41 T 29-03-2018 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 36 52 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 167 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 208 227 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 52 73 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 252 271 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 171 190 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 297 323 1.1E-96 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 PIRSF PIRSF019574 1 352 5.5E-133 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 Gene3D G3DSA:3.40.190.10 17 148 2.9E-23 T 29-03-2018 CPU03_RS00550 12687a0ad19829e33d63be58d97e9265 352 SUPERFAMILY SSF53850 31 349 7.12E-97 T 29-03-2018 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 655 4.1E-116 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 Pfam PF00593 TonB dependent receptor 261 660 5.9E-39 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 Gene3D G3DSA:2.170.130.10 24 159 4.2E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 29-03-2018 IPR010916 TonB box, conserved site CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 34 662 3.7E-159 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 4.8E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 Gene3D G3DSA:2.40.170.20 160 662 5.9E-59 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS16725 cad16860f2231580b8ed2e91001c6cd8 662 SUPERFAMILY SSF56935 34 662 4.03E-95 T 29-03-2018 CPU03_RS12055 862be819fe5658cfe1a88137ab04ba6c 177 Gene3D G3DSA:2.60.40.1090 23 177 2.6E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12055 862be819fe5658cfe1a88137ab04ba6c 177 Pfam PF00419 Fimbrial protein 26 177 1.5E-7 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12055 862be819fe5658cfe1a88137ab04ba6c 177 SUPERFAMILY SSF49401 31 177 1.04E-28 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 Gene3D G3DSA:3.40.228.10 191 432 6.0E-70 T 29-03-2018 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 Gene3D G3DSA:2.40.40.20 638 759 3.2E-18 T 29-03-2018 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 SUPERFAMILY SSF50692 641 758 1.45E-13 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 Pfam PF00384 Molybdopterin oxidoreductase 108 473 2.6E-27 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 PIRSF PIRSF000144 1 759 0.0 T 29-03-2018 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 Pfam PF01568 Molydopterin dinucleotide binding domain 642 751 1.2E-8 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 SUPERFAMILY SSF53706 46 626 1.57E-144 T 29-03-2018 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 Gene3D G3DSA:3.40.50.740 108 190 8.2E-9 T 29-03-2018 CPU03_RS13505 984f1a18d2a7d609e0d951ca6b689550 759 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 12 757 0.0 T 29-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 CPU03_RS04885 d16af35de086611c01f76b89e7ec1756 184 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 178 3.9E-42 T 29-03-2018 IPR005247 YbhB/YbcL CPU03_RS04885 d16af35de086611c01f76b89e7ec1756 184 Gene3D G3DSA:3.90.280.10 16 180 2.9E-49 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS04885 d16af35de086611c01f76b89e7ec1756 184 SUPERFAMILY SSF49777 23 178 1.96E-51 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS04885 d16af35de086611c01f76b89e7ec1756 184 Pfam PF01161 Phosphatidylethanolamine-binding protein 48 179 5.4E-35 T 29-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CPU03_RS10420 e25e5df34f0a380f60193ab318068f36 248 Pfam PF01048 Phosphorylase superfamily 17 203 7.0E-37 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS10420 e25e5df34f0a380f60193ab318068f36 248 SUPERFAMILY SSF53167 4 209 1.07E-61 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS10420 e25e5df34f0a380f60193ab318068f36 248 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 63 78 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS10420 e25e5df34f0a380f60193ab318068f36 248 Gene3D G3DSA:3.40.50.1580 12 240 8.7E-49 T 29-03-2018 CPU03_RS10110 7c759a60b139482620e5015982be0364 986 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 128 2.8E-14 T 29-03-2018 CPU03_RS10110 7c759a60b139482620e5015982be0364 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 882 982 1.8E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10110 7c759a60b139482620e5015982be0364 986 Gene3D G3DSA:3.30.565.10 1 276 2.0E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10110 7c759a60b139482620e5015982be0364 986 SUPERFAMILY SSF55874 8 176 1.57E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10110 7c759a60b139482620e5015982be0364 986 SMART SM00387 878 984 1.0E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10110 7c759a60b139482620e5015982be0364 986 Gene3D G3DSA:3.30.565.10 837 985 1.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS10110 7c759a60b139482620e5015982be0364 986 SUPERFAMILY SSF55874 853 978 1.22E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.6E-6 T 29-03-2018 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.6E-6 T 29-03-2018 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.6E-6 T 29-03-2018 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 PRINTS PR01036 Tetracycline resistance protein TetB signature 306 330 1.6E-6 T 29-03-2018 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 SUPERFAMILY SSF103473 11 201 1.31E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 SUPERFAMILY SSF103473 252 453 1.31E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 Gene3D G3DSA:1.20.1250.20 262 453 3.9E-26 T 29-03-2018 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 Pfam PF07690 Major Facilitator Superfamily 22 414 1.1E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS00730 0eca00ed6a8a592aeff2ff486a5f1484 459 Gene3D G3DSA:1.20.1250.20 10 202 8.4E-26 T 29-03-2018 CPU03_RS13365 f517e6d77fea16ded66bfb0430591d4b 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 1.2E-79 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13365 f517e6d77fea16ded66bfb0430591d4b 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.9E-134 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CPU03_RS13365 f517e6d77fea16ded66bfb0430591d4b 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.623 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 267 288 - T 29-03-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 SUPERFAMILY SSF53383 5 449 6.42E-129 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 34 380 1.9E-98 T 29-03-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 Gene3D G3DSA:3.90.1150.10 328 447 8.7E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 Gene3D G3DSA:3.40.640.10 66 327 4.8E-28 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS10995 c940a8b47e59e701c8e83d2a6e7dc6e5 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 14 446 3.8E-196 T 29-03-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 SUPERFAMILY SSF54782 226 314 1.96E-28 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Gene3D G3DSA:3.30.160.40 227 310 4.3E-25 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 11 303 38.9 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 303 1.4E-110 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 SUPERFAMILY SSF53850 10 225 2.28E-84 T 29-03-2018 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 232 301 4.5E-22 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Gene3D G3DSA:3.40.190.10 113 205 6.5E-39 T 29-03-2018 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 218 3.2E-78 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 237 253 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PIRSF PIRSF001438 1 316 4.8E-121 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 Gene3D G3DSA:3.40.190.10 2 112 8.3E-45 T 29-03-2018 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PRINTS PR00151 Porphobilinogen deaminase signature 51 71 1.3E-48 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 1.3E-48 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PRINTS PR00151 Porphobilinogen deaminase signature 130 147 1.3E-48 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PRINTS PR00151 Porphobilinogen deaminase signature 236 253 1.3E-48 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07385 62a3d226d33ed4707e60a0f8973dcf03 317 PRINTS PR00151 Porphobilinogen deaminase signature 82 101 1.3E-48 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.0E-49 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 441 51.057 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 SUPERFAMILY SSF52540 75 361 5.16E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 Gene3D G3DSA:3.40.50.300 227 451 1.1E-46 T 29-03-2018 CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 Gene3D G3DSA:3.40.50.300 1 226 7.1E-60 T 29-03-2018 CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 SMART SM00490 259 340 3.4E-32 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 Pfam PF00271 Helicase conserved C-terminal domain 235 339 6.9E-26 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS13575 6d504a7ae43a68d50731559f4b028532 452 SMART SM00487 20 223 3.7E-61 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS02870 5a408b58150a2ef0c4d081fd0ff032a9 224 SUPERFAMILY SSF53474 3 202 2.52E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS02870 5a408b58150a2ef0c4d081fd0ff032a9 224 Pfam PF02230 Phospholipase/Carboxylesterase 4 198 4.6E-27 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CPU03_RS02870 5a408b58150a2ef0c4d081fd0ff032a9 224 Gene3D G3DSA:3.40.50.1820 1 210 1.3E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 SUPERFAMILY SSF55729 256 417 4.79E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 PIRSF PIRSF000423 1 441 3.7E-204 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 Gene3D G3DSA:3.40.630.30 296 440 3.1E-21 T 29-03-2018 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 SUPERFAMILY SSF53633 3 290 2.79E-68 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 Gene3D G3DSA:3.40.1160.10 6 293 3.7E-55 T 29-03-2018 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 441 1.6E-193 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 Pfam PF00583 Acetyltransferase (GNAT) family 330 412 6.6E-7 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 229.889 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CPU03_RS04305 4c05eadd5af02be350923d307dfaac71 441 Pfam PF00696 Amino acid kinase family 25 267 2.1E-29 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 Pfam PF00582 Universal stress protein family 4 146 7.4E-19 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 Pfam PF00582 Universal stress protein family 191 300 1.5E-13 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 Gene3D G3DSA:3.40.50.620 1 155 3.3E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 SUPERFAMILY SSF52402 4 153 4.19E-28 T 29-03-2018 CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 Gene3D G3DSA:3.40.50.620 156 303 6.1E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS16530 aafec774f3b1d05390c4c267fb3b11e7 320 SUPERFAMILY SSF52402 157 307 3.52E-25 T 29-03-2018 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.737 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 9.0E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 SMART SM00836 461 577 7.6E-37 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Gene3D G3DSA:3.40.50.620 107 441 3.5E-60 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Gene3D G3DSA:1.10.730.10 442 577 8.5E-44 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.1E-20 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Pfam PF00750 tRNA synthetases class I (R) 96 447 1.1E-167 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 SMART SM01016 1 87 1.6E-27 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.5E-203 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.2E-34 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 Gene3D G3DSA:3.30.1360.70 1 106 4.7E-29 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 SUPERFAMILY SSF52374 111 455 1.13E-97 T 29-03-2018 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 SUPERFAMILY SSF47323 455 577 1.96E-35 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 SUPERFAMILY SSF55190 2 98 2.09E-22 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CPU03_RS01500 da1b639e97cf5d2664861509f8874bc1 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 151 7.3E-40 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 8.5E-90 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 SUPERFAMILY SSF56784 3 184 9.87E-55 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 PIRSF PIRSF004682 1 187 5.4E-69 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 Pfam PF13242 HAD-hyrolase-like 109 178 2.6E-12 T 29-03-2018 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 3.3E-43 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CPU03_RS05075 bd7d06f1c7682290ecd7a9ee6cce83b4 187 Gene3D G3DSA:3.40.50.1000 4 187 1.6E-33 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12205 5745556d7a675656984fcb3594056572 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 9.2E-138 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CPU03_RS12205 5745556d7a675656984fcb3594056572 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CPU03_RS12205 5745556d7a675656984fcb3594056572 370 Pfam PF01098 Cell cycle protein 22 364 4.7E-123 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CPU03_RS17025 09ee6b97ac2a24120a129601a03169f9 80 SUPERFAMILY SSF69369 9 58 6.28E-14 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 CPU03_RS17025 09ee6b97ac2a24120a129601a03169f9 80 Pfam PF03515 Colicin-like bacteriocin tRNase domain 11 57 2.8E-16 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 CPU03_RS08665 b9801e59c00c628767b45ca5cd22fbe3 560 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 555 3.1E-221 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CPU03_RS08665 b9801e59c00c628767b45ca5cd22fbe3 560 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 22 558 4.3E-211 T 29-03-2018 IPR017744 Cellulose biosynthesis protein BcsG CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 SUPERFAMILY SSF56059 83 346 6.01E-67 T 29-03-2018 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.2E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.5E-85 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 4.6E-250 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 SUPERFAMILY SSF51246 331 444 7.32E-44 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.7E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Gene3D G3DSA:3.30.1490.20 129 202 1.1E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 SMART SM00878 336 441 1.5E-66 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 SUPERFAMILY SSF52440 1 113 2.59E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Gene3D G3DSA:3.30.470.20 205 444 1.6E-97 T 29-03-2018 CPU03_RS09850 4f02a44f6957e26282e1e668fed1565a 449 Gene3D G3DSA:3.40.50.20 1 128 3.2E-51 T 29-03-2018 CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.6E-294 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 Gene3D G3DSA:3.40.50.300 290 554 1.2E-57 T 29-03-2018 CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 SUPERFAMILY SSF52540 303 531 5.5E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 Pfam PF00005 ABC transporter 22 191 6.3E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 Pfam PF00005 ABC transporter 340 473 5.0E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 SMART SM00382 348 522 2.9E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 SMART SM00382 31 236 7.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 Pfam PF12848 ABC transporter 230 305 1.5E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 SUPERFAMILY SSF52540 12 243 1.02E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05140 096cf1cbae3e72624ce96f201c7d745a 555 Gene3D G3DSA:3.40.50.300 12 289 1.3E-55 T 29-03-2018 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 SUPERFAMILY SSF55174 19 70 1.7E-9 T 29-03-2018 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 Gene3D G3DSA:3.10.290.10 5 77 2.1E-15 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 2.5E-93 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 Gene3D G3DSA:3.30.2350.10 92 317 2.0E-66 T 29-03-2018 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 Pfam PF01479 S4 domain 20 66 1.7E-11 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 SMART SM00363 20 79 9.1E-10 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 Pfam PF00849 RNA pseudouridylate synthase 102 248 1.0E-29 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS14550 542593a210ec5db3785095e228628bf7 320 SUPERFAMILY SSF55120 95 314 5.44E-65 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 SUPERFAMILY SSF52540 7 201 2.75E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 SUPERFAMILY SSF52317 251 452 6.33E-29 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 5 445 42.297 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 Gene3D G3DSA:3.40.50.300 2 169 9.6E-38 T 29-03-2018 CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 194 1.3E-20 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 Gene3D G3DSA:3.40.50.880 170 425 2.6E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 9 451 4.8E-133 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CPU03_RS15020 f033554f812fd9dac2396b1e2cec2309 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 444 1.0E-39 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 Pfam PF04055 Radical SAM superfamily 21 191 5.6E-12 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 Gene3D G3DSA:3.20.20.70 12 391 1.1E-35 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 13 391 1.0E-154 T 29-03-2018 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 284 373 1.3E-19 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 176 408 6.0E-14 T 29-03-2018 CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 Pfam PF13186 Iron-sulfur cluster-binding domain 285 345 6.5E-7 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain CPU03_RS12815 473a5582e75e6fbbe838c95459d89e1e 410 SUPERFAMILY SSF102114 20 354 2.49E-37 T 29-03-2018 CPU03_RS10170 add97f9164b9fbd2178b492c3c01464b 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 102 6.4E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS10170 add97f9164b9fbd2178b492c3c01464b 244 SMART SM00862 25 102 3.9E-14 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS10170 add97f9164b9fbd2178b492c3c01464b 244 SUPERFAMILY SSF46894 24 102 3.12E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS10170 add97f9164b9fbd2178b492c3c01464b 244 Gene3D G3DSA:1.10.10.10 4 109 2.8E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14785 be7e082ab491ad138218f9f5b3c83931 351 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 350 1.6E-41 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS14785 be7e082ab491ad138218f9f5b3c83931 351 Gene3D G3DSA:3.30.70.270 185 351 4.1E-49 T 29-03-2018 CPU03_RS14785 be7e082ab491ad138218f9f5b3c83931 351 SUPERFAMILY SSF55073 199 350 4.63E-42 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS14785 be7e082ab491ad138218f9f5b3c83931 351 SMART SM00267 183 351 8.8E-48 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS14785 be7e082ab491ad138218f9f5b3c83931 351 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 347 7.6E-40 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS04160 3482295b9c1a36a15b04c6c9c191eb04 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CPU03_RS04160 3482295b9c1a36a15b04c6c9c191eb04 285 Pfam PF01148 Cytidylyltransferase family 3 279 2.3E-68 T 29-03-2018 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 SUPERFAMILY SSF54292 6 109 7.62E-35 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.1E-61 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 Gene3D G3DSA:3.10.20.30 3 111 7.0E-33 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 2.4E-16 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.1E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.1E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CPU03_RS11315 67220fd09c6266e345847c47a1e9652e 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.1E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.808 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 SUPERFAMILY SSF53613 1 302 3.59E-81 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 Gene3D G3DSA:3.40.1190.20 1 306 6.1E-77 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 1.6E-112 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.3E-64 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 PRINTS PR00990 Ribokinase signature 32 51 6.7E-30 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 PRINTS PR00990 Ribokinase signature 5 26 6.7E-30 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 PRINTS PR00990 Ribokinase signature 173 188 6.7E-30 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 PRINTS PR00990 Ribokinase signature 217 228 6.7E-30 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS15095 10da4b770036326560ef20df199c74fa 306 PRINTS PR00990 Ribokinase signature 104 117 6.7E-30 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CPU03_RS02460 4e5829cf734ed30bef4b899f86f9391c 665 Pfam PF01757 Acyltransferase family 5 331 3.6E-26 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CPU03_RS02460 4e5829cf734ed30bef4b899f86f9391c 665 Gene3D G3DSA:3.40.50.1110 407 649 3.2E-6 T 29-03-2018 CPU03_RS00545 27b554924bd32a197fbb8380282d7527 443 PIRSF PIRSF006060 1 429 2.2E-46 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS00545 27b554924bd32a197fbb8380282d7527 443 Pfam PF13520 Amino acid permease 7 400 4.0E-36 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS17235 6a17b0b86e67d3028697f0e041e6b53b 80 Gene3D G3DSA:3.30.160.130 10 78 5.3E-39 T 29-03-2018 CPU03_RS17235 6a17b0b86e67d3028697f0e041e6b53b 80 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 7 80 4.0E-32 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CPU03_RS17235 6a17b0b86e67d3028697f0e041e6b53b 80 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 78 4.6E-42 T 29-03-2018 IPR009253 Protein of unknown function DUF905 CPU03_RS17235 6a17b0b86e67d3028697f0e041e6b53b 80 SUPERFAMILY SSF54786 15 78 8.63E-30 T 29-03-2018 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 447 2.9E-166 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 9.6E-36 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 9.6E-36 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 9.6E-36 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 9.6E-36 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 9.6E-36 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 SUPERFAMILY SSF56601 23 473 1.88E-103 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 24 468 5.6E-159 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CPU03_RS06075 5b7fc0e0d518325628d393bcb80a27c5 477 Gene3D G3DSA:3.40.710.10 20 477 1.3E-38 T 29-03-2018 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 Gene3D G3DSA:3.10.580.10 152 296 1.2E-11 T 29-03-2018 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 SMART SM00924 62 165 5.6E-14 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 Gene3D G3DSA:1.25.60.10 40 151 1.1E-8 T 29-03-2018 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 Pfam PF01769 Divalent cation transporter 351 444 1.7E-6 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 SUPERFAMILY SSF54631 165 305 3.54E-17 T 29-03-2018 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 Gene3D G3DSA:1.10.357.20 307 480 1.1E-9 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 SUPERFAMILY SSF158791 53 161 2.75E-14 T 29-03-2018 CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 Pfam PF03448 MgtE intracellular N domain 64 161 1.2E-13 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CPU03_RS03535 bdc01a99df3884d5315829d1cf0fe4e4 480 SUPERFAMILY SSF161093 308 447 1.31E-15 T 29-03-2018 CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 SMART SM00634 520 611 1.7E-10 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 Pfam PF02369 Bacterial Ig-like domain (group 1) 528 613 2.0E-9 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 Gene3D G3DSA:2.60.40.10 524 623 1.2E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 SUPERFAMILY SSF49373 527 615 3.53E-32 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 Pfam PF11924 Inverse autotransporter, beta-domain 126 397 1.1E-105 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 Gene3D G3DSA:2.60.40.10 430 522 0.051 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 PRINTS PR01369 Intimin signature 433 445 2.0E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 PRINTS PR01369 Intimin signature 249 264 2.0E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 PRINTS PR01369 Intimin signature 277 296 2.0E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 PRINTS PR01369 Intimin signature 345 364 2.0E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS11930 588417ad1e4d5145d261ab8aecf6bc82 694 Gene3D G3DSA:3.10.350.10 34 105 2.0E-5 T 29-03-2018 CPU03_RS10735 f0b4a241cd1ed1ae6e5de7cfb431d2e5 154 SUPERFAMILY SSF47413 4 73 9.29E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS10735 f0b4a241cd1ed1ae6e5de7cfb431d2e5 154 Pfam PF13560 Helix-turn-helix domain 8 64 1.5E-14 T 29-03-2018 CPU03_RS10735 f0b4a241cd1ed1ae6e5de7cfb431d2e5 154 SMART SM00530 12 67 2.8E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS10735 f0b4a241cd1ed1ae6e5de7cfb431d2e5 154 Gene3D G3DSA:1.10.260.40 1 79 1.7E-19 T 29-03-2018 CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 TIGRFAM TIGR00260 thrC: threonine synthase 53 395 5.0E-116 T 29-03-2018 IPR004450 Threonine synthase-like CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Gene3D G3DSA:3.40.50.1100 101 196 9.3E-19 T 29-03-2018 CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Gene3D G3DSA:3.90.1380.10 1 81 6.8E-15 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 365 3.7E-23 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Gene3D G3DSA:3.40.50.1100 197 321 6.6E-41 T 29-03-2018 CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Gene3D G3DSA:3.40.50.1100 323 394 1.1E-11 T 29-03-2018 CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 SUPERFAMILY SSF53686 1 425 1.09E-130 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS04985 a34b1f2abf1ae6f49d34f13cbdaa69b5 428 Pfam PF14821 Threonine synthase N terminus 8 80 7.8E-10 T 29-03-2018 IPR029144 Threonine synthase, N-terminal CPU03_RS09555 e2068c963ff488b91c3f83db66b6a8b1 370 Gene3D G3DSA:3.40.50.450 104 258 1.9E-37 T 29-03-2018 CPU03_RS09555 e2068c963ff488b91c3f83db66b6a8b1 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 63 280 4.9E-76 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CPU03_RS09555 e2068c963ff488b91c3f83db66b6a8b1 370 Pfam PF02481 DNA recombination-mediator protein A 68 270 6.9E-77 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CPU03_RS09555 e2068c963ff488b91c3f83db66b6a8b1 370 Gene3D G3DSA:1.10.10.10 271 358 3.6E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09555 e2068c963ff488b91c3f83db66b6a8b1 370 SUPERFAMILY SSF102405 73 280 9.01E-45 T 29-03-2018 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 1.3E-48 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 SUPERFAMILY SSF46689 2 77 4.14E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 SUPERFAMILY SSF48498 84 202 4.5E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.7E-18 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 Gene3D G3DSA:1.10.357.10 1 216 4.5E-40 T 29-03-2018 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.4E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS03245 72f4fd7d7de84bade1d594c3a23ce320 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.4E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 Gene3D G3DSA:3.40.50.300 57 370 3.1E-80 T 29-03-2018 CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 SUPERFAMILY SSF52540 106 376 1.0E-91 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 SMART SM00382 171 354 4.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 448 1.8E-198 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 361 370 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 370 8.0E-72 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS14410 6e15acc84266ca3a100b14c29bd6f1aa 452 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 450 4.7E-189 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CPU03_RS04765 2e733fda4bbf75a16ab31daa44e8e7fa 490 PIRSF PIRSF002457 4 490 4.5E-135 T 29-03-2018 IPR030676 Citrate carrier CitT-related CPU03_RS04765 2e733fda4bbf75a16ab31daa44e8e7fa 490 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 484 1.3E-115 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS04765 2e733fda4bbf75a16ab31daa44e8e7fa 490 Pfam PF00939 Sodium:sulfate symporter transmembrane region 13 490 4.1E-139 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 Pfam PF00005 ABC transporter 17 165 1.4E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 SMART SM00382 26 213 7.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 PIRSF PIRSF039085 1 240 1.3E-108 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 Gene3D G3DSA:3.40.50.300 1 240 1.1E-75 T 29-03-2018 CPU03_RS13675 baaf3c20d638970ed1ec32600aea5146 240 SUPERFAMILY SSF52540 1 235 1.42E-79 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10450 9421a2b05155aaef88622bce14ad8730 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 155 8.2E-26 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CPU03_RS06800 4cbe181d11b0459626e15ca1baa45284 444 Pfam PF01554 MatE 17 177 1.2E-27 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS06800 4cbe181d11b0459626e15ca1baa45284 444 Pfam PF01554 MatE 241 394 1.0E-11 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS06800 4cbe181d11b0459626e15ca1baa45284 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 9.2E-92 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 SMART SM00853 466 603 0.0027 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 2.6E-11 T 29-03-2018 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.9E-38 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.6E-102 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 SUPERFAMILY SSF54211 191 330 1.44E-36 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 SUPERFAMILY SSF55874 1 200 3.8E-55 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 642 25.525 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 SMART SM01340 212 330 1.4E-54 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Gene3D G3DSA:3.30.565.10 1 216 1.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Pfam PF08676 MutL C terminal dimerisation domain 463 593 3.4E-20 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 SUPERFAMILY SSF118116 463 639 1.57E-30 T 29-03-2018 CPU03_RS06305 aa70e868636cadaf29788589b837b7b2 649 Gene3D G3DSA:3.30.230.10 217 329 5.1E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS16080 eaadf0fde6120c00916a4a648f57cb4c 504 Pfam PF12792 CSS motif domain associated with EAL 50 227 1.0E-15 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CPU03_RS16080 eaadf0fde6120c00916a4a648f57cb4c 504 SUPERFAMILY SSF141868 262 502 2.22E-71 T 29-03-2018 IPR001633 EAL domain CPU03_RS16080 eaadf0fde6120c00916a4a648f57cb4c 504 SMART SM00052 255 498 4.3E-79 T 29-03-2018 IPR001633 EAL domain CPU03_RS16080 eaadf0fde6120c00916a4a648f57cb4c 504 Pfam PF00563 EAL domain 263 493 2.6E-59 T 29-03-2018 IPR001633 EAL domain CPU03_RS16080 eaadf0fde6120c00916a4a648f57cb4c 504 Gene3D G3DSA:3.20.20.450 257 503 4.7E-72 T 29-03-2018 IPR001633 EAL domain CPU03_RS05305 3fb2645520f7f65f538a408c9e3bf8dd 100 Gene3D G3DSA:3.30.750.24 5 99 4.0E-5 T 29-03-2018 IPR002645 STAS domain CPU03_RS05305 3fb2645520f7f65f538a408c9e3bf8dd 100 SUPERFAMILY SSF52091 6 93 2.16E-12 T 29-03-2018 IPR002645 STAS domain CPU03_RS05305 3fb2645520f7f65f538a408c9e3bf8dd 100 Pfam PF13466 STAS domain 15 90 2.5E-14 T 29-03-2018 IPR002645 STAS domain CPU03_RS05350 2a266114df0b747632b6c4d1d24b1144 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 8 168 26.119 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CPU03_RS05350 2a266114df0b747632b6c4d1d24b1144 185 Gene3D G3DSA:2.60.450.10 28 165 1.7E-28 T 29-03-2018 CPU03_RS05350 2a266114df0b747632b6c4d1d24b1144 185 Pfam PF03968 OstA-like protein 38 149 5.8E-31 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CPU03_RS05350 2a266114df0b747632b6c4d1d24b1144 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 29 167 6.9E-50 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Gene3D G3DSA:3.40.50.720 1 108 4.6E-21 T 29-03-2018 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 SUPERFAMILY SSF52283 4 109 1.04E-16 T 29-03-2018 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Gene3D G3DSA:3.40.50.720 109 259 1.2E-32 T 29-03-2018 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 1.6E-29 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 279 6.8E-17 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.382 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 3.3E-33 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CPU03_RS13150 b45970f9451d5cc0939f468d48672f3b 375 SUPERFAMILY SSF51735 91 257 1.01E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 Pfam PF00107 Zinc-binding dehydrogenase 161 298 1.1E-18 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 SUPERFAMILY SSF50129 6 146 6.64E-38 T 29-03-2018 IPR011032 GroES-like CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 Gene3D G3DSA:3.40.50.720 152 278 1.0E-25 T 29-03-2018 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 SMART SM00829 22 339 1.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 Pfam PF16884 N-terminal domain of oxidoreductase 9 116 6.8E-37 T 29-03-2018 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 Gene3D G3DSA:3.90.180.10 279 341 5.3E-4 T 29-03-2018 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 Gene3D G3DSA:3.90.180.10 2 151 1.3E-31 T 29-03-2018 CPU03_RS03895 e50a02acd7ddd876f772807fbb570777 343 SUPERFAMILY SSF51735 126 307 9.35E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02105 4b5f6f9a7a2795461da4939fe8db35ed 419 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 5 409 7.8E-145 T 29-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CPU03_RS02105 4b5f6f9a7a2795461da4939fe8db35ed 419 Pfam PF04403 Paraquat-inducible protein A 52 201 4.7E-37 T 29-03-2018 IPR007498 Paraquat-inducible protein A CPU03_RS02105 4b5f6f9a7a2795461da4939fe8db35ed 419 Pfam PF04403 Paraquat-inducible protein A 254 409 3.3E-54 T 29-03-2018 IPR007498 Paraquat-inducible protein A CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 SUPERFAMILY SSF53613 4 296 1.18E-57 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 PIRSF PIRSF000535 1 311 2.4E-90 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 306 1.1E-86 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 Gene3D G3DSA:3.40.1190.20 44 312 1.2E-44 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 Pfam PF00294 pfkB family carbohydrate kinase 15 295 2.2E-49 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB CPU03_RS16835 c0c1ca3cfb35a2c52c41b0fcdb880ccb 317 Gene3D G3DSA:2.20.150.10 11 43 1.2E-5 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 SUPERFAMILY SSF52833 4 81 4.46E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 PRINTS PR00160 Glutaredoxin signature 52 65 6.9E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 PRINTS PR00160 Glutaredoxin signature 3 21 6.9E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 PRINTS PR00160 Glutaredoxin signature 66 79 6.9E-12 T 29-03-2018 IPR014025 Glutaredoxin subgroup CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 Pfam PF00462 Glutaredoxin 4 69 6.4E-17 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 Gene3D G3DSA:3.40.30.10 1 86 2.1E-21 T 29-03-2018 CPU03_RS13915 de9f954f1c021c44c9550d7b9e1a4801 90 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 3.3E-50 T 29-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CPU03_RS11405 182848e0a8f5ac750ea1399eb360cd24 316 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 3 316 1.5E-124 T 29-03-2018 IPR017566 NrfD CPU03_RS11405 182848e0a8f5ac750ea1399eb360cd24 316 Gene3D G3DSA:1.20.1630.10 8 316 6.3E-53 T 29-03-2018 CPU03_RS11405 182848e0a8f5ac750ea1399eb360cd24 316 Pfam PF03916 Polysulphide reductase, NrfD 3 316 2.5E-86 T 29-03-2018 IPR005614 NrfD family CPU03_RS11190 fb770c20bf5906ceb18365a4ee478538 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 243 4.6E-67 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CPU03_RS11190 fb770c20bf5906ceb18365a4ee478538 244 Gene3D G3DSA:3.60.140.10 1 244 3.8E-97 T 29-03-2018 CPU03_RS11190 fb770c20bf5906ceb18365a4ee478538 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 242 2.0E-82 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CPU03_RS11190 fb770c20bf5906ceb18365a4ee478538 244 SUPERFAMILY SSF64438 3 243 2.75E-86 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CPU03_RS15185 aa4f448a77d52be061eb74744024268f 375 Gene3D G3DSA:3.20.20.70 1 375 1.3E-120 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS15185 aa4f448a77d52be061eb74744024268f 375 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 351 6.6E-84 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CPU03_RS15185 aa4f448a77d52be061eb74744024268f 375 SUPERFAMILY SSF51395 1 373 9.16E-119 T 29-03-2018 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 Pfam PF01380 SIS domain 124 252 4.4E-26 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 Gene3D G3DSA:3.40.50.10490 94 279 9.6E-37 T 29-03-2018 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 SUPERFAMILY SSF46689 1 80 2.51E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 SUPERFAMILY SSF53697 94 277 1.08E-42 T 29-03-2018 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.3E-29 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CPU03_RS01380 705c2bd90de6f217c4b720451207b0a0 289 Gene3D G3DSA:1.10.10.10 1 93 8.2E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 SUPERFAMILY SSF53335 5 268 2.04E-72 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 Gene3D G3DSA:3.40.50.150 150 268 5.0E-15 T 29-03-2018 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.9E-18 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 PIRSF PIRSF000398 1 271 4.8E-67 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 Gene3D G3DSA:1.10.1020.10 57 149 5.2E-33 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.9E-70 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS09245 6947049d390f0da0fa01301fb64acb62 272 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.6E-96 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 SUPERFAMILY SSF56784 7 187 2.8E-44 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 Gene3D G3DSA:1.10.150.240 20 76 4.2E-14 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 Gene3D G3DSA:3.40.50.1000 77 189 5.8E-21 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 185 6.1E-24 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 185 9.8E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS11070 a768531593751812b736b8cc1d8f21fd 191 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 2.4E-53 T 29-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 Pfam PF09821 C-terminal AAA-associated domain 307 425 2.3E-42 T 29-03-2018 IPR018632 C-terminal AAA-associated domain CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 SUPERFAMILY SSF52540 20 258 1.39E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 Pfam PF00005 ABC transporter 36 175 2.2E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 Gene3D G3DSA:3.40.50.300 14 237 2.0E-57 T 29-03-2018 CPU03_RS10030 a18c317df745a925e7ec90600c301626 438 SMART SM00382 45 227 3.6E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SMART SM00387 776 886 1.6E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:1.10.287.130 661 726 6.6E-11 T 29-03-2018 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.7E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Pfam PF13492 GAF domain 586 646 2.5E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SUPERFAMILY SSF55874 721 888 2.1E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:3.40.50.620 227 381 1.7E-9 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 1.2E-29 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 885 5.5E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SUPERFAMILY SSF47384 660 733 4.9E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 230 1.4E-98 T 29-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:1.20.120.620 402 500 3.3E-26 T 29-03-2018 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:3.30.450.40 501 660 7.8E-7 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SUPERFAMILY SSF55781 511 661 5.1E-6 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SUPERFAMILY SSF52402 254 348 1.59E-6 T 29-03-2018 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 SMART SM00388 665 732 4.6E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:3.40.50.300 21 148 4.2E-22 T 29-03-2018 CPU03_RS12435 12b8d02a7016e01a56fe241e40b535cf 902 Gene3D G3DSA:3.30.565.10 727 886 3.4E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13635 3b8118bc4c76ccbebdc18a8eebd5939b 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 3.0E-35 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CPU03_RS13635 3b8118bc4c76ccbebdc18a8eebd5939b 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.15 T 29-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CPU03_RS13635 3b8118bc4c76ccbebdc18a8eebd5939b 94 SUPERFAMILY SSF50715 1 93 7.67E-31 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS13635 3b8118bc4c76ccbebdc18a8eebd5939b 94 Gene3D G3DSA:2.40.240.10 1 94 3.8E-30 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CPU03_RS13635 3b8118bc4c76ccbebdc18a8eebd5939b 94 Pfam PF01386 Ribosomal L25p family 4 91 3.7E-24 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Pfam PF13362 Toprim domain 213 303 4.0E-12 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SUPERFAMILY SSF57783 11 96 1.62E-8 T 29-03-2018 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Pfam PF08273 Zinc-binding domain of primase-helicase 30 69 2.1E-12 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Pfam PF08706 D5 N terminal like 373 470 6.6E-8 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SMART SM00778 30 69 1.2E-14 T 29-03-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SUPERFAMILY SSF52540 437 623 3.33E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SUPERFAMILY SSF46785 674 772 3.54E-40 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Gene3D G3DSA:1.10.10.10 675 771 2.9E-38 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Gene3D G3DSA:3.40.1360.10 199 318 1.3E-15 T 29-03-2018 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SMART SM00885 339 466 4.6E-18 T 29-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 SMART SM00493 211 286 2.7E-6 T 29-03-2018 IPR006171 TOPRIM domain CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Pfam PF03288 Poxvirus D5 protein-like 673 772 2.1E-21 T 29-03-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Gene3D G3DSA:3.90.580.10 6 98 1.5E-10 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CPU03_RS11605 f3f58bdc5cdfdeb0b71645a1e5b3d91a 778 Gene3D G3DSA:3.40.50.300 455 651 2.0E-12 T 29-03-2018 CPU03_RS05085 b483898c2ee3f6b98a7a62ceb19011d4 217 Gene3D G3DSA:1.10.3720.10 1 217 1.0E-38 T 29-03-2018 CPU03_RS05085 b483898c2ee3f6b98a7a62ceb19011d4 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 216 1.2E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS05085 b483898c2ee3f6b98a7a62ceb19011d4 217 SUPERFAMILY SSF161098 9 201 5.36E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 Pfam PF00677 Lumazine binding domain 100 185 5.9E-22 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 Pfam PF00677 Lumazine binding domain 3 87 1.3E-21 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 SUPERFAMILY SSF63380 1 93 6.29E-28 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 Gene3D G3DSA:2.40.30.20 94 192 1.3E-27 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.7E-83 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 SUPERFAMILY SSF63380 93 199 4.08E-32 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 Gene3D G3DSA:2.40.30.20 1 93 3.9E-29 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CPU03_RS00735 6eed879b51bcf423f3a3b8664539b535 211 PIRSF PIRSF000498 1 206 7.5E-74 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 146 3.2E-37 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 Gene3D G3DSA:2.60.40.10 27 147 1.4E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 Gene3D G3DSA:2.60.40.10 149 239 5.2E-18 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 SUPERFAMILY SSF49584 153 240 8.9E-20 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 227 5.6E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 PRINTS PR00969 Pili chaperone signature 105 122 5.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 PRINTS PR00969 Pili chaperone signature 75 96 5.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 PRINTS PR00969 Pili chaperone signature 164 179 5.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 PRINTS PR00969 Pili chaperone signature 28 37 5.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 PRINTS PR00969 Pili chaperone signature 128 143 5.7E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS12050 249e469d59b0cb9ae91dc47b98fcafb0 242 SUPERFAMILY SSF49354 28 150 2.62E-39 T 29-03-2018 IPR008962 PapD-like CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 387 1.9E-92 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 Gene3D G3DSA:3.90.1150.10 259 393 3.6E-31 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 14 389 5.1E-131 T 29-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 PIRSF PIRSF001434 1 391 2.1E-110 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 Gene3D G3DSA:3.40.640.10 10 258 2.7E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS02300 7dfb5a1a4692a087bd60a16bf03efd49 393 SUPERFAMILY SSF53383 52 389 1.03E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS11125 5733c2970c890adf222a0deb855f5a30 182 SUPERFAMILY SSF53335 13 167 6.14E-18 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11125 5733c2970c890adf222a0deb855f5a30 182 Pfam PF13649 Methyltransferase domain 50 141 1.8E-7 T 29-03-2018 CPU03_RS11125 5733c2970c890adf222a0deb855f5a30 182 Gene3D G3DSA:3.40.50.150 7 175 1.1E-16 T 29-03-2018 CPU03_RS17060 8448d915c41e09364ec742d3bb5e6a70 206 SUPERFAMILY SSF48657 46 198 3.14E-31 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS17060 8448d915c41e09364ec742d3bb5e6a70 206 Pfam PF04352 ProQ/FINO family 99 202 6.7E-22 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS17060 8448d915c41e09364ec742d3bb5e6a70 206 SMART SM00945 97 204 6.8E-16 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS17060 8448d915c41e09364ec742d3bb5e6a70 206 Pfam PF12602 Fertility inhibition protein N terminal 1 65 3.0E-14 T 29-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal CPU03_RS17060 8448d915c41e09364ec742d3bb5e6a70 206 Gene3D G3DSA:1.10.1710.10 43 205 2.7E-33 T 29-03-2018 IPR016103 ProQ/FinO domain CPU03_RS04675 08674a25f81a8789ad9af2a34b8a39ad 403 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 34 389 3.5E-133 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CPU03_RS04675 08674a25f81a8789ad9af2a34b8a39ad 403 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 32 399 41.909 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CPU03_RS04675 08674a25f81a8789ad9af2a34b8a39ad 403 Pfam PF01098 Cell cycle protein 36 391 2.8E-123 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CPU03_RS04675 08674a25f81a8789ad9af2a34b8a39ad 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 348 372 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CPU03_RS16330 56cf25a96f4cc3805ad49c41d45acc65 209 Pfam PF04205 FMN-binding domain 100 187 1.2E-17 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CPU03_RS16330 56cf25a96f4cc3805ad49c41d45acc65 209 PIRSF PIRSF006091 1 204 3.2E-70 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CPU03_RS16330 56cf25a96f4cc3805ad49c41d45acc65 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 8.6E-61 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CPU03_RS16330 56cf25a96f4cc3805ad49c41d45acc65 209 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.206 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CPU03_RS16330 56cf25a96f4cc3805ad49c41d45acc65 209 SMART SM00900 100 192 2.1E-28 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 SUPERFAMILY SSF46626 173 327 2.02E-46 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Pfam PF00034 Cytochrome c 347 460 2.9E-8 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Pfam PF03150 Di-haem cytochrome c peroxidase 192 339 6.5E-48 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Pfam PF14376 Haem-binding domain 18 159 2.2E-36 T 29-03-2018 IPR025992 Haem-binding domain CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Gene3D G3DSA:1.10.760.10 52 189 1.2E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Gene3D G3DSA:1.10.760.10 190 343 4.0E-42 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 Gene3D G3DSA:1.10.760.10 344 503 2.1E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 SMART SM01235 16 162 6.3E-54 T 29-03-2018 IPR025992 Haem-binding domain CPU03_RS16420 120aca86b57a0d48163b7dbd7d03fb89 508 SUPERFAMILY SSF46626 328 468 4.86E-40 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Pfam PF01330 RuvA N terminal domain 2 62 2.4E-19 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Pfam PF07499 RuvA, C-terminal domain 158 200 2.4E-12 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Gene3D G3DSA:1.10.150.20 120 168 0.071 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 202 32.464 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Gene3D G3DSA:1.10.150.280 57 80 0.0053 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 SMART SM00278 108 127 0.068 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 SMART SM00278 73 92 0.054 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Gene3D G3DSA:1.10.8.10 169 201 5.6E-12 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Gene3D G3DSA:2.40.50.140 2 56 1.1E-22 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Gene3D G3DSA:1.10.150.20 81 119 1.9E-13 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.2E-17 T 29-03-2018 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 SUPERFAMILY SSF47781 66 136 2.11E-22 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 SUPERFAMILY SSF46929 157 200 5.23E-9 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 SUPERFAMILY SSF50249 2 63 2.4E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS01425 27d8477269c73d99c1c2271048746dd8 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 3.9E-68 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 Pfam PF00303 Thymidylate synthase 2 264 6.4E-124 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 SUPERFAMILY SSF55831 1 264 8.51E-128 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.6E-90 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.6E-42 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 Gene3D G3DSA:3.30.572.10 1 264 8.2E-130 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.0E-46 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.0E-46 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.0E-46 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.0E-46 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.0E-46 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS04350 672c31b087b0a80fa263382dbcc6330a 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 39.184 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CPU03_RS16440 4357a5d12eae7cf5023d97ebc37d92c8 97 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 16 78 7.0E-13 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 CPU03_RS16440 4357a5d12eae7cf5023d97ebc37d92c8 97 Pfam PF06649 Protein of unknown function (DUF1161) 25 78 1.8E-25 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 CPU03_RS02135 c2afd02a35053a6243218e643f2ad669 184 PIRSF PIRSF010252 1 176 4.4E-56 T 29-03-2018 IPR009809 Cell division protein ZapC CPU03_RS02135 c2afd02a35053a6243218e643f2ad669 184 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 176 38.489 T 29-03-2018 IPR009809 Cell division protein ZapC CPU03_RS02135 c2afd02a35053a6243218e643f2ad669 184 Pfam PF07126 Cell-division protein ZapC 3 170 1.5E-64 T 29-03-2018 IPR009809 Cell division protein ZapC CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 Gene3D G3DSA:2.40.50.140 13 105 4.5E-7 T 29-03-2018 CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.1E-99 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.457 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 5.0E-137 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.4E-32 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CPU03_RS11425 16e8aa9b119f72407b39879807732362 461 Gene3D G3DSA:3.90.226.10 175 413 0.057 T 29-03-2018 CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 SMART SM00382 32 213 3.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 SMART SM00382 354 535 2.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 SUPERFAMILY SSF52540 325 549 3.37E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 Gene3D G3DSA:3.40.50.300 326 572 1.8E-61 T 29-03-2018 CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 Gene3D G3DSA:3.40.50.300 2 277 2.2E-52 T 29-03-2018 CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 SUPERFAMILY SSF52540 5 227 4.38E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 Pfam PF00005 ABC transporter 26 165 4.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS13560 83a4d1a3aad6957391cc28472373ee06 578 Pfam PF00005 ABC transporter 346 489 3.9E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 Pfam PF07690 Major Facilitator Superfamily 19 412 7.5E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 Gene3D G3DSA:1.20.1250.20 254 504 8.4E-29 T 29-03-2018 CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 3.2E-203 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 Gene3D G3DSA:1.20.1250.20 3 193 2.9E-31 T 29-03-2018 CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 SUPERFAMILY SSF103473 250 422 4.58E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 SUPERFAMILY SSF103473 474 499 4.58E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS11540 1c339f671f7302ee890ed0e933c49b08 511 SUPERFAMILY SSF103473 8 195 4.58E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 SUPERFAMILY SSF46561 1 61 3.27E-21 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 Pfam PF00831 Ribosomal L29 protein 4 60 5.6E-22 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.8E-20 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 Gene3D G3DSA:1.10.287.310 1 63 8.2E-23 T 29-03-2018 CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09420 193803933e7963264ab428fb34c6f1d3 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.503 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS17050 3f7e6fd05fc532b6fec6709e5750a2bf 24 Pfam PF08048 Tap RepA1 leader peptide 1 22 1.1E-8 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CPU03_RS17050 3f7e6fd05fc532b6fec6709e5750a2bf 24 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 23 1.2E-11 T 29-03-2018 IPR012605 RepA1 leader peptide Tap CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF81886 620 840 9.55E-85 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF81886 877 889 9.55E-85 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF52540 416 618 7.45E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 4.0E-68 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.3E-39 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SMART SM00957 6 402 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Gene3D G3DSA:3.40.50.300 417 634 6.0E-55 T 29-03-2018 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.991 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Gene3D G3DSA:3.10.450.50 735 901 1.5E-56 T 29-03-2018 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SMART SM00958 228 358 5.7E-82 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 63 87 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 101 115 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 170 190 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 339 361 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 413 426 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 376 393 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 PRINTS PR00906 SecA protein signature 117 127 7.5E-74 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Gene3D G3DSA:3.40.50.300 9 267 3.0E-56 T 29-03-2018 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Gene3D G3DSA:3.40.50.300 299 416 4.7E-8 T 29-03-2018 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF81767 227 368 4.71E-44 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Pfam PF07517 SecA DEAD-like domain 7 402 8.0E-132 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 29-03-2018 IPR004027 SEC-C motif CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF52540 368 415 6.29E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 SUPERFAMILY SSF52540 5 228 6.29E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04625 fdf051869ae05bf5e9aa5b8ace96a969 902 Gene3D G3DSA:1.10.3060.10 635 734 6.7E-28 T 29-03-2018 CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 SUPERFAMILY SSF56784 4 258 3.88E-53 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 3 257 4.3E-113 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 269 134.089 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 Gene3D G3DSA:1.10.150.240 22 89 2.9E-31 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 Gene3D G3DSA:3.40.50.1000 90 258 2.8E-21 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS15405 c430f0071288c861ffc1cee82e14555b 269 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 203 1.6E-14 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 SMART SM00354 1 71 7.7E-33 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 SUPERFAMILY SSF53822 61 330 2.51E-69 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 SUPERFAMILY SSF47413 1 59 8.75E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.5E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 Gene3D G3DSA:3.40.50.2300 175 313 8.2E-45 T 29-03-2018 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 Gene3D G3DSA:3.40.50.2300 54 174 1.4E-31 T 29-03-2018 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.2E-6 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 Gene3D G3DSA:1.10.260.40 2 53 1.5E-23 T 29-03-2018 CPU03_RS10885 6630515df7626d413b3c50376de6d0db 336 Pfam PF13377 Periplasmic binding protein-like domain 168 311 1.2E-34 T 29-03-2018 CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Gene3D G3DSA:3.30.70.20 105 142 3.0E-21 T 29-03-2018 CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Gene3D G3DSA:3.30.70.20 48 104 1.6E-15 T 29-03-2018 CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Pfam PF13247 4Fe-4S dicluster domain 82 178 7.0E-21 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 SUPERFAMILY SSF54862 31 217 4.35E-54 T 29-03-2018 CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Pfam PF00037 4Fe-4S binding domain 38 54 9.0E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Gene3D G3DSA:3.30.70.20 143 213 5.6E-13 T 29-03-2018 CPU03_RS02785 b5a0ede7b4e70eb17e5442f2d1bbf4d0 218 Gene3D G3DSA:3.30.70.20 21 47 0.001 T 29-03-2018 CPU03_RS00805 5dfab7c048d124636240154e22d15d4f 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 9.0E-39 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CPU03_RS00805 5dfab7c048d124636240154e22d15d4f 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 28.567 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CPU03_RS00805 5dfab7c048d124636240154e22d15d4f 153 PIRSF PIRSF020687 1 152 2.1E-60 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CPU03_RS00805 5dfab7c048d124636240154e22d15d4f 153 Pfam PF06173 Protein of unknown function (DUF986) 4 150 2.9E-61 T 29-03-2018 IPR009328 Protein of unknown function DUF986 CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 SUPERFAMILY SSF53254 1 195 1.06E-55 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 180 6.9E-50 T 29-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 Gene3D G3DSA:3.40.50.1240 1 197 1.7E-50 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 PIRSF PIRSF000709 1 186 1.7E-11 T 29-03-2018 CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 SMART SM00855 2 155 5.7E-21 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS00855 9c3a8d4a48ee3b51b2589369f2a2362c 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 1.5E-56 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:3.30.190.20 136 248 7.8E-42 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:3.40.50.300 611 939 9.9E-55 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:3.40.50.300 35 135 2.5E-4 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.016 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:3.40.50.300 412 610 2.3E-22 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:3.40.50.300 3 34 0.0026 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 Gene3D G3DSA:1.10.8.280 285 405 2.5E-37 T 29-03-2018 CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 SUPERFAMILY SSF52540 3 204 1.58E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 SUPERFAMILY SSF52540 450 569 1.58E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09690 3751a54972ce92682a3e4c8544e58d2d 943 SUPERFAMILY SSF52540 613 910 2.55E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 SUPERFAMILY SSF56420 2 164 9.68E-63 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.52 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 Gene3D G3DSA:3.90.45.10 1 171 3.2E-62 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 Pfam PF01327 Polypeptide deformylase 4 152 7.2E-50 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.6E-64 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 PIRSF PIRSF004749 1 171 5.7E-55 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 PRINTS PR01576 Peptide deformylase signature 101 119 5.3E-38 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 PRINTS PR01576 Peptide deformylase signature 120 149 5.3E-38 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 PRINTS PR01576 Peptide deformylase signature 89 100 5.3E-38 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS09550 05e90cf55d785d270dbf7929c6fbd223 171 PRINTS PR01576 Peptide deformylase signature 33 62 5.3E-38 T 29-03-2018 IPR023635 Peptide deformylase CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 810 0.0 T 29-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 Pfam PF01228 Glycine radical 688 791 3.0E-31 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 SUPERFAMILY SSF51998 6 808 1.65E-220 T 29-03-2018 CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 Pfam PF02901 Pyruvate formate lyase-like 11 671 6.1E-204 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 PIRSF PIRSF000379 60 810 1.5E-181 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS05800 8632ccca73a0b72dd051e633e3de699f 810 Gene3D G3DSA:3.20.70.20 9 810 1.5E-268 T 29-03-2018 CPU03_RS10675 6ef075eb4b4682cbcbaf1f5f9bb9510a 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 9.2E-154 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CPU03_RS10675 6ef075eb4b4682cbcbaf1f5f9bb9510a 577 Pfam PF02272 DHHA1 domain 322 449 7.5E-26 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CPU03_RS10675 6ef075eb4b4682cbcbaf1f5f9bb9510a 577 SUPERFAMILY SSF64182 48 466 6.15E-115 T 29-03-2018 CPU03_RS10675 6ef075eb4b4682cbcbaf1f5f9bb9510a 577 Pfam PF01368 DHH family 75 201 4.6E-8 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CPU03_RS10675 6ef075eb4b4682cbcbaf1f5f9bb9510a 577 Gene3D G3DSA:3.90.1640.10 52 247 2.9E-21 T 29-03-2018 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 1.6E-48 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 Gene3D G3DSA:2.40.100.10 1 164 1.2E-53 T 29-03-2018 IPR029000 Cyclophilin-like domain CPU03_RS11880 170b612482328e02bb1b558214d21297 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.6E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.6E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.6E-11 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 PIRSF PIRSF001467 1 164 2.3E-29 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CPU03_RS11880 170b612482328e02bb1b558214d21297 164 SUPERFAMILY SSF50891 1 162 2.63E-59 T 29-03-2018 IPR029000 Cyclophilin-like domain CPU03_RS14505 a7376869257007c3f272d82502e3d6ee 248 Pfam PF06251 Capsule biosynthesis GfcC 18 247 1.6E-58 T 29-03-2018 IPR010425 Domain of unknown function DUF1017 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Gene3D G3DSA:1.10.1060.10 4 50 0.0075 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Gene3D G3DSA:3.30.70.20 118 146 3.2E-7 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Pfam PF12838 4Fe-4S dicluster domain 113 160 1.7E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Gene3D G3DSA:3.30.70.20 51 79 2.8E-7 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 SUPERFAMILY SSF54862 41 168 4.81E-19 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 12 161 7.7E-48 T 29-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Gene3D G3DSA:3.30.70.20 80 117 3.0E-5 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Gene3D G3DSA:3.30.70.20 147 173 7.6E-8 T 29-03-2018 CPU03_RS02825 fb69c6f4be3dd512ebab31e1b34cfac3 175 Pfam PF13187 4Fe-4S dicluster domain 42 86 9.5E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS11140 03d2919545c81d8e37348de3ed8cc32e 298 SMART SM00342 210 294 6.2E-4 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11140 03d2919545c81d8e37348de3ed8cc32e 298 Gene3D G3DSA:1.10.10.60 241 296 0.0044 T 29-03-2018 CPU03_RS11140 03d2919545c81d8e37348de3ed8cc32e 298 Pfam PF12833 Helix-turn-helix domain 218 289 4.3E-8 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS00260 4e3865e3e8c171e26fa7db1e2c89c6c9 72 Gene3D G3DSA:1.10.10.10 1 70 2.6E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00260 4e3865e3e8c171e26fa7db1e2c89c6c9 72 Pfam PF01726 LexA DNA binding domain 1 65 4.3E-22 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CPU03_RS00260 4e3865e3e8c171e26fa7db1e2c89c6c9 72 SUPERFAMILY SSF46785 3 70 2.99E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15375 9b63758c0223315ad46c93fad72707a4 411 Gene3D G3DSA:1.20.1250.20 3 198 8.4E-34 T 29-03-2018 CPU03_RS15375 9b63758c0223315ad46c93fad72707a4 411 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 387 3.7E-89 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CPU03_RS15375 9b63758c0223315ad46c93fad72707a4 411 Gene3D G3DSA:1.20.1250.20 211 398 2.4E-10 T 29-03-2018 CPU03_RS15375 9b63758c0223315ad46c93fad72707a4 411 SUPERFAMILY SSF103473 5 384 3.01E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15375 9b63758c0223315ad46c93fad72707a4 411 Pfam PF07690 Major Facilitator Superfamily 22 355 2.4E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 Gene3D G3DSA:2.40.150.20 1 123 2.7E-53 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.8E-60 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 SMART SM01374 1 123 9.0E-86 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 9.0E-55 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 SUPERFAMILY SSF50193 2 122 4.32E-51 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CPU03_RS09430 a3e46d6ee4bda2324dc0376d424907c7 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.545 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CPU03_RS16705 565ca949981cf6abd104e6accbbf5730 458 Gene3D G3DSA:3.20.20.70 30 346 8.8E-40 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS16705 565ca949981cf6abd104e6accbbf5730 458 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 2.6E-170 T 29-03-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW CPU03_RS16705 565ca949981cf6abd104e6accbbf5730 458 SMART SM00729 53 275 7.4E-46 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS16705 565ca949981cf6abd104e6accbbf5730 458 Pfam PF04055 Radical SAM superfamily 58 229 6.4E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS16705 565ca949981cf6abd104e6accbbf5730 458 SUPERFAMILY SSF102114 6 423 2.88E-87 T 29-03-2018 CPU03_RS13515 2cbcfeea3e7c9c80f52c7c9c836c3084 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 29-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS13515 2cbcfeea3e7c9c80f52c7c9c836c3084 376 Gene3D G3DSA:1.10.620.20 1 346 3.6E-113 T 29-03-2018 CPU03_RS13515 2cbcfeea3e7c9c80f52c7c9c836c3084 376 SUPERFAMILY SSF47240 3 340 6.77E-113 T 29-03-2018 IPR009078 Ferritin-like superfamily CPU03_RS13515 2cbcfeea3e7c9c80f52c7c9c836c3084 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.2E-45 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CPU03_RS08450 689db5b2361ec62c221e2c1c05f4675d 206 SUPERFAMILY SSF46785 6 181 1.28E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08450 689db5b2361ec62c221e2c1c05f4675d 206 Gene3D G3DSA:1.10.10.10 5 152 1.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11000 d9abc7c9cd97a2931937e47ec3b7c714 527 Pfam PF13520 Amino acid permease 18 454 9.2E-61 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS11000 d9abc7c9cd97a2931937e47ec3b7c714 527 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 14 487 8.2E-260 T 29-03-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter CPU03_RS11000 d9abc7c9cd97a2931937e47ec3b7c714 527 PIRSF PIRSF006060 8 484 1.1E-53 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03055 b80d32e9c053e59d15360a97006c07b9 152 PIRSF PIRSF009103 1 152 1.3E-44 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 CPU03_RS03055 b80d32e9c053e59d15360a97006c07b9 152 SUPERFAMILY SSF89872 28 151 1.7E-41 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 CPU03_RS03055 b80d32e9c053e59d15360a97006c07b9 152 Gene3D G3DSA:3.40.1420.10 28 145 1.1E-37 T 29-03-2018 CPU03_RS03055 b80d32e9c053e59d15360a97006c07b9 152 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 35 150 9.3E-43 T 29-03-2018 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 SMART SM00388 241 307 9.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 SMART SM00387 353 454 3.9E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Gene3D G3DSA:1.10.287.130 232 301 1.1E-12 T 29-03-2018 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 453 2.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 SUPERFAMILY SSF55874 296 453 2.49E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.7E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 SUPERFAMILY SSF47384 225 306 3.92E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Pfam PF08521 Two-component sensor kinase N-terminal 25 163 1.3E-6 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Gene3D G3DSA:1.20.5.1040 10 62 1.3E-10 T 29-03-2018 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Gene3D G3DSA:1.20.5.1040 134 188 5.7E-14 T 29-03-2018 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 306 2.6E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS05815 6092c99cceabce990a9e70c2dc8be0af 454 Gene3D G3DSA:3.30.565.10 302 454 3.5E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 SUPERFAMILY SSF52833 471 573 4.44E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 SUPERFAMILY SSF74863 27 140 3.01E-39 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 178 382 3.5E-19 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Gene3D G3DSA:3.40.30.10 445 487 2.3E-5 T 29-03-2018 CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Gene3D G3DSA:2.60.40.1250 25 148 2.9E-38 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Pfam PF13899 Thioredoxin-like 467 547 8.4E-12 T 29-03-2018 CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 2 575 38.423 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Pfam PF11412 Disulphide bond corrector protein DsbC 27 137 4.3E-33 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CPU03_RS06460 bf44ffd8bdac9bf397d9cef4a370849d 585 Gene3D G3DSA:3.40.30.10 488 582 2.9E-15 T 29-03-2018 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 Pfam PF00717 Peptidase S24-like 86 158 3.7E-20 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 SUPERFAMILY SSF51306 78 323 4.97E-81 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 Pfam PF10502 Signal peptidase, peptidase S26 260 302 2.0E-7 T 29-03-2018 IPR019533 Peptidase S26 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 Gene3D G3DSA:2.10.109.10 76 320 6.0E-57 T 29-03-2018 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 258 304 1.2E-17 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 5.2E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.0E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 4.0E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.0E-25 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CPU03_RS11755 c01a12624de522928a4fc2e2ede7dfeb 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CPU03_RS12810 12d78e37465cbfc0d32f1c2844bf4f4e 349 Gene3D G3DSA:1.50.10.10 2 348 6.1E-67 T 29-03-2018 CPU03_RS12810 12d78e37465cbfc0d32f1c2844bf4f4e 349 SUPERFAMILY SSF48208 32 347 9.86E-53 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CPU03_RS12810 12d78e37465cbfc0d32f1c2844bf4f4e 349 Pfam PF07470 Glycosyl Hydrolase Family 88 39 347 1.0E-74 T 29-03-2018 IPR010905 Glycosyl hydrolase, family 88 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 Gene3D G3DSA:4.10.520.10 1 90 2.6E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 SUPERFAMILY SSF47729 1 90 1.62E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 SMART SM00411 1 90 1.9E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS07030 cfad0dc66f63a7c10eb9a8bf4700af76 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 TIGRFAM TIGR00815 sulP: sulfate permease 19 558 5.1E-131 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 Pfam PF00916 Sulfate permease family 29 414 8.6E-78 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 Pfam PF01740 STAS domain 460 558 5.3E-7 T 29-03-2018 IPR002645 STAS domain CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 Gene3D G3DSA:3.30.750.24 445 562 6.2E-15 T 29-03-2018 IPR002645 STAS domain CPU03_RS01580 42accca6dd6ef5d4163e936c683b07a2 566 SUPERFAMILY SSF52091 455 563 5.3E-13 T 29-03-2018 IPR002645 STAS domain CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.2E-213 T 29-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 Gene3D G3DSA:3.90.1150.10 243 376 8.8E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.568 T 29-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 PIRSF PIRSF000390 1 376 2.9E-118 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 6.5E-86 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 SUPERFAMILY SSF53383 2 375 1.07E-98 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS07445 6809cdc91456055856cf9fe991c13285 376 Gene3D G3DSA:3.40.640.10 1 242 8.2E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 SUPERFAMILY SSF51998 121 687 1.77E-196 T 29-03-2018 CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 5.5E-182 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 Pfam PF03477 ATP cone domain 4 89 5.4E-20 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 2.5E-205 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CPU03_RS05925 1a3fcab788067b0fee8d4f4951de96a7 712 Gene3D G3DSA:3.20.70.20 121 687 6.1E-206 T 29-03-2018 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 SUPERFAMILY SSF53686 4 389 8.25E-142 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 Gene3D G3DSA:3.40.50.1100 8 65 3.0E-7 T 29-03-2018 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 Gene3D G3DSA:3.40.50.1100 66 195 2.2E-39 T 29-03-2018 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 7.6E-187 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 377 5.9E-48 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 Gene3D G3DSA:3.40.50.1100 196 397 2.1E-36 T 29-03-2018 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 PIRSF PIRSF001413 1 396 1.7E-165 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS00935 37e017ffd2f8978f96b39c97a41a689b 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.379 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CPU03_RS15945 540c81b97b73cd1c97caf90243c8d49b 76 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 3 63 2.1E-20 T 29-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SUPERFAMILY SSF46689 599 704 3.99E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Pfam PF00158 Sigma-54 interaction domain 386 552 7.5E-72 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SUPERFAMILY SSF55781 189 363 4.14E-24 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SMART SM00382 406 550 3.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SUPERFAMILY SSF52540 385 623 6.08E-74 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Gene3D G3DSA:3.30.450.40 185 379 2.8E-29 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Gene3D G3DSA:3.30.450.40 15 184 3.0E-18 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Gene3D G3DSA:1.10.8.60 559 628 1.7E-21 T 29-03-2018 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Pfam PF01590 GAF domain 209 350 1.4E-11 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Gene3D G3DSA:1.10.10.60 629 709 5.6E-9 T 29-03-2018 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Gene3D G3DSA:3.40.50.300 382 558 4.9E-29 T 29-03-2018 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 Pfam PF13185 GAF domain 53 171 9.2E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 599 608 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 410 423 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SMART SM00065 32 180 0.018 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SMART SM00065 208 360 6.0E-18 T 29-03-2018 IPR003018 GAF domain GO:0005515 CPU03_RS10795 6b609ee85bf5e894a8af15c60df4b5e6 711 SUPERFAMILY SSF55781 16 176 1.05E-13 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS15150 c102236919d6d3807c804b6831f556e0 259 Gene3D G3DSA:3.40.50.300 1 245 1.9E-47 T 29-03-2018 CPU03_RS15150 c102236919d6d3807c804b6831f556e0 259 Pfam PF00005 ABC transporter 26 162 6.4E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS15150 c102236919d6d3807c804b6831f556e0 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS15150 c102236919d6d3807c804b6831f556e0 259 SMART SM00382 29 221 5.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS15150 c102236919d6d3807c804b6831f556e0 259 SUPERFAMILY SSF52540 6 228 5.95E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 1.1E-194 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 372 7.5E-13 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 SUPERFAMILY SSF53335 3 372 7.25E-51 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 77.857 T 29-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CPU03_RS13940 d9de5bea0f1ce654d091bc787e085c6e 379 Gene3D G3DSA:3.40.50.150 2 373 2.2E-44 T 29-03-2018 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 Gene3D G3DSA:3.40.710.10 251 615 1.3E-83 T 29-03-2018 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 Gene3D G3DSA:3.90.1310.10 34 250 6.6E-55 T 29-03-2018 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 1.8E-234 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 SUPERFAMILY SSF56601 255 608 3.27E-92 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 SUPERFAMILY SSF56519 57 254 1.22E-52 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.9E-45 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS12210 21717b3e49028d10ac97715545f38b2c 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 8.2E-85 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS12385 a5f54735068c996209582eeb4d66ca8b 465 Pfam PF03573 outer membrane porin, OprD family 33 435 6.3E-25 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CPU03_RS12385 a5f54735068c996209582eeb4d66ca8b 465 Gene3D G3DSA:2.40.160.10 2 465 1.8E-95 T 29-03-2018 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 SUPERFAMILY SSF56796 4 382 6.54E-133 T 29-03-2018 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 4.3E-127 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 Gene3D G3DSA:3.40.50.1970 9 183 7.9E-50 T 29-03-2018 CPU03_RS04030 30179f866d4e72234f1779e273bdf078 383 Gene3D G3DSA:1.20.1090.10 184 383 1.2E-65 T 29-03-2018 CPU03_RS13470 c99cfce775c7b709e2eb959be772edbf 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 260 4.1E-95 T 29-03-2018 IPR010119 Gluconeogenesis factor CPU03_RS13470 c99cfce775c7b709e2eb959be772edbf 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 290 1.1E-74 T 29-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CPU03_RS13470 c99cfce775c7b709e2eb959be772edbf 302 Gene3D G3DSA:3.40.50.10680 89 301 4.0E-34 T 29-03-2018 CPU03_RS13470 c99cfce775c7b709e2eb959be772edbf 302 SUPERFAMILY SSF142338 12 295 3.27E-81 T 29-03-2018 CPU03_RS13470 c99cfce775c7b709e2eb959be772edbf 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 30.869 T 29-03-2018 IPR010119 Gluconeogenesis factor CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 Gene3D G3DSA:3.40.50.720 12 257 3.9E-58 T 29-03-2018 CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 Pfam PF00106 short chain dehydrogenase 21 217 3.1E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 SUPERFAMILY SSF51735 17 250 2.66E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 1.1E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 1.1E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 1.1E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 1.1E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS00845 8ae0eeb6e0ab7ec72abdd84537a28799 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 1.1E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 7.7E-57 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 SMART SM01004 9 333 1.1E-234 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 SUPERFAMILY SSF51569 8 335 6.7E-142 T 29-03-2018 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 PIRSF PIRSF001415 3 336 4.0E-149 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.0E-137 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CPU03_RS07205 c2cc2643495ab91fcd04ae42a42d6820 340 Gene3D G3DSA:3.20.20.70 2 337 3.5E-149 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS03005 e33dda1139b8ae39b4f61a87a0a5c7e0 96 SUPERFAMILY SSF51182 1 94 1.84E-31 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS03005 e33dda1139b8ae39b4f61a87a0a5c7e0 96 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 2.7E-31 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CPU03_RS03005 e33dda1139b8ae39b4f61a87a0a5c7e0 96 Gene3D G3DSA:2.60.120.10 3 93 2.1E-32 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS03005 e33dda1139b8ae39b4f61a87a0a5c7e0 96 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 24.516 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 Gene3D G3DSA:3.40.30.10 2 95 2.3E-25 T 29-03-2018 CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 SUPERFAMILY SSF52833 11 110 9.45E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 Gene3D G3DSA:1.20.1050.10 96 210 7.2E-18 T 29-03-2018 CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 SUPERFAMILY SSF47616 82 208 1.99E-27 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 194 2.4E-12 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal CPU03_RS05260 d40e712065245d5b56efaa1ee811c18c 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 4.9E-18 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 SUPERFAMILY SSF55021 53 133 8.24E-27 T 29-03-2018 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 40 3.5E-10 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 SUPERFAMILY SSF47598 2 42 3.89E-10 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 Gene3D G3DSA:3.30.70.1150 38 129 2.7E-30 T 29-03-2018 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 Pfam PF08753 NikR C terminal nickel binding domain 55 130 5.8E-29 T 29-03-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 Gene3D G3DSA:1.10.1220.10 3 37 6.5E-13 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 Hamap MF_00476 Nickel-responsive regulator [nikR]. 2 133 26.75 T 29-03-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 CPU03_RS06675 ade81cd4030a0d09c5079e455ff5e139 150 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 3 132 4.3E-58 T 29-03-2018 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 Gene3D G3DSA:1.25.40.80 131 290 4.1E-38 T 29-03-2018 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 SUPERFAMILY SSF48173 191 470 1.96E-105 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 Pfam PF03441 FAD binding domain of DNA photolyase 273 466 2.0E-79 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 Gene3D G3DSA:3.40.50.620 1 130 1.7E-30 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 Gene3D G3DSA:1.10.579.10 291 471 1.5E-69 T 29-03-2018 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 SUPERFAMILY SSF52425 3 197 4.45E-50 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 Pfam PF00875 DNA photolyase 5 171 2.9E-40 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 PRINTS PR00147 DNA photolyase signature 382 396 5.9E-27 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 PRINTS PR00147 DNA photolyase signature 323 339 5.9E-27 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 PRINTS PR00147 DNA photolyase signature 142 158 5.9E-27 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CPU03_RS12470 d580f6762b8dcf15249dac153101fc64 477 PRINTS PR00147 DNA photolyase signature 343 361 5.9E-27 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CPU03_RS17115 6c8b36e3253cd27357d8044412006bb0 250 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 2 249 1.6E-90 T 29-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF CPU03_RS17115 6c8b36e3253cd27357d8044412006bb0 250 Gene3D G3DSA:3.40.30.10 33 245 3.4E-4 T 29-03-2018 CPU03_RS17115 6c8b36e3253cd27357d8044412006bb0 250 Pfam PF13728 F plasmid transfer operon protein 24 239 2.5E-65 T 29-03-2018 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 SMART SM00382 99 247 1.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 SUPERFAMILY SSF52540 42 352 6.64E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 SMART SM00962 100 296 6.5E-116 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 SMART SM00963 1 86 6.5E-38 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Pfam PF02978 Signal peptide binding domain 329 427 1.0E-32 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Gene3D G3DSA:1.20.120.140 211 310 5.6E-33 T 29-03-2018 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.5E-74 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Gene3D G3DSA:1.20.120.140 1 91 1.2E-29 T 29-03-2018 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Gene3D G3DSA:1.10.260.30 328 432 4.9E-38 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.6E-180 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Gene3D G3DSA:3.40.50.300 99 210 2.9E-16 T 29-03-2018 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 SUPERFAMILY SSF47446 298 431 2.88E-46 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CPU03_RS11100 df9947f0b86242bbb4bec91db041672a 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.887 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 PIRSF PIRSF001338 5 168 1.8E-67 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 SMART SM01001 8 159 8.7E-102 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 Pfam PF00731 AIR carboxylase 9 157 5.6E-64 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 Gene3D G3DSA:3.40.50.7700 1 165 4.5E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.561 T 29-03-2018 IPR033747 Class I PurE CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 SUPERFAMILY SSF52255 7 166 3.14E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CPU03_RS11865 d8e45d979920e979ef4bf3837d80ec6c 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 8.9E-66 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CPU03_RS06230 b7257b1d09467308ca79b20b1df122a7 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 91 1.2E-13 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS06230 b7257b1d09467308ca79b20b1df122a7 91 SUPERFAMILY SSF159871 2 91 1.44E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS06230 b7257b1d09467308ca79b20b1df122a7 91 Gene3D G3DSA:3.30.1660.10 21 91 7.5E-15 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 Gene3D G3DSA:3.40.190.10 148 260 1.1E-9 T 29-03-2018 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 SUPERFAMILY SSF53850 92 293 2.35E-15 T 29-03-2018 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 Gene3D G3DSA:1.10.10.10 1 83 9.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 SUPERFAMILY SSF46785 1 84 2.18E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10440 ba80ae375adb5c24bc38990152decdde 306 Pfam PF03466 LysR substrate binding domain 92 291 3.3E-16 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1030 0.0 T 29-03-2018 IPR017701 Putative selenate reductase YgfK CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF51395 289 408 2.04E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF51395 208 259 2.04E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF51395 45 140 2.04E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:3.20.20.70 43 409 1.3E-14 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 842 2.1E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:1.10.1060.10 872 966 3.6E-9 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:1.10.1060.10 410 554 1.7E-24 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:3.50.50.60 555 645 1.1E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF46548 400 563 1.15E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 PRINTS PR00419 Adrenodoxin reductase family signature 554 576 3.4E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 PRINTS PR00419 Adrenodoxin reductase family signature 577 590 3.4E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 PRINTS PR00419 Adrenodoxin reductase family signature 683 697 3.4E-15 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF51971 553 788 4.24E-46 T 29-03-2018 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:3.50.50.60 697 862 2.1E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 SUPERFAMILY SSF46548 879 971 1.1E-9 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 941 952 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 456 533 6.3E-16 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CPU03_RS09750 c748148f844f2d6f947578c03bb8043c 1035 Gene3D G3DSA:3.50.50.60 646 696 6.3E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 SUPERFAMILY SSF81301 196 409 5.72E-64 T 29-03-2018 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 738 1.7E-186 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 SUPERFAMILY SSF109604 20 207 1.54E-43 T 29-03-2018 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Gene3D G3DSA:3.30.460.10 208 341 6.1E-44 T 29-03-2018 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Pfam PF13291 ACT domain 663 739 5.8E-18 T 29-03-2018 IPR002912 ACT domain CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 SUPERFAMILY SSF81271 399 464 1.14E-21 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 SUPERFAMILY SSF55021 664 740 1.22E-14 T 29-03-2018 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 2.5E-36 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 SMART SM00954 251 361 2.8E-66 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Pfam PF02824 TGS domain 405 464 2.2E-21 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Pfam PF13328 HD domain 57 191 9.9E-40 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Gene3D G3DSA:3.30.70.260 659 740 1.1E-11 T 29-03-2018 CPU03_RS11795 1cba41dd573617a0a8aebd1b3875c098 748 Gene3D G3DSA:3.10.20.30 399 474 8.8E-25 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 Pfam PF03222 Tryptophan/tyrosine permease family 8 403 3.0E-142 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 23 39 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 154 174 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 329 347 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 234 253 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 88 108 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 16 39 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 195 217 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 350 369 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 43 62 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 PRINTS PR00166 Aromatic amino acid permease signature 295 314 2.5E-100 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS11580 a2e8d3fbe21d1d7c74c7c4b1fd7a19ae 416 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 13 397 3.2E-149 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 Gene3D G3DSA:1.10.10.10 126 239 4.1E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 Gene3D G3DSA:3.40.50.2300 2 125 2.5E-38 T 29-03-2018 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 SUPERFAMILY SSF52172 3 126 9.11E-42 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 SMART SM00448 5 116 8.6E-45 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 SUPERFAMILY SSF46894 132 234 7.09E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS09145 0bcbdb42af58c66e307d46522304e39a 239 SMART SM00862 156 232 1.7E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 153 171 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 11 30 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 186 208 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 50 74 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 236 256 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 PRINTS PR00783 Major intrinsic protein family signature 87 106 2.8E-53 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 SUPERFAMILY SSF81338 11 259 4.45E-81 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 Pfam PF00230 Major intrinsic protein 6 253 6.8E-71 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 Gene3D G3DSA:1.20.1080.10 3 261 2.7E-80 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 ProSitePatterns PS00221 MIP family signature. 68 76 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS08470 9c4523225d89d05f645d3d8685570871 280 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 8.3E-72 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CPU03_RS12955 f30f55dc7e7446245ccecb3a11a7e56e 241 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 9 241 8.1E-82 T 29-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CPU03_RS12955 f30f55dc7e7446245ccecb3a11a7e56e 241 Gene3D G3DSA:3.40.50.1000 30 241 2.3E-29 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12955 f30f55dc7e7446245ccecb3a11a7e56e 241 SUPERFAMILY SSF56784 36 240 1.63E-54 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12955 f30f55dc7e7446245ccecb3a11a7e56e 241 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 8 221 8.2E-24 T 29-03-2018 IPR005519 Acid phosphatase, class B-like CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 Pfam PF03315 Serine dehydratase beta chain 3 155 5.6E-55 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 Gene3D G3DSA:3.30.1330.90 10 158 1.1E-50 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 SUPERFAMILY SSF143548 16 158 4.45E-46 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.7E-96 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.3E-223 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CPU03_RS13855 3acc3b675805005963958fcc64fe3652 455 Gene3D G3DSA:1.10.4100.10 261 444 9.4E-34 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 Gene3D G3DSA:3.30.70.260 93 180 1.2E-12 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 Pfam PF13740 ACT domain 7 82 3.6E-25 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 SUPERFAMILY SSF55021 91 179 7.25E-19 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 Gene3D G3DSA:3.30.70.260 8 89 2.7E-10 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 SUPERFAMILY SSF55021 6 86 4.2E-16 T 29-03-2018 CPU03_RS02895 7cb0386b0825276803b51fd12b1f95aa 185 PIRSF PIRSF028103 5 180 3.7E-67 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CPU03_RS16825 250c5c9e855b7627b09cf05e70b4ec06 79 Pfam PF13996 YobH-like protein 2 70 1.6E-24 T 29-03-2018 IPR025611 YobH-like protein CPU03_RS11845 54d160623385a31f1b06fcd2a855abfb 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 191 3.4E-22 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CPU03_RS11845 54d160623385a31f1b06fcd2a855abfb 218 Gene3D G3DSA:3.40.50.1110 27 211 9.8E-36 T 29-03-2018 CPU03_RS11845 54d160623385a31f1b06fcd2a855abfb 218 SUPERFAMILY SSF52266 30 208 3.36E-49 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Gene3D G3DSA:1.10.287.1060 241 329 0.0013 T 29-03-2018 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 SMART SM00304 216 267 1.8E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Gene3D G3DSA:1.20.120.30 38 176 1.9E-29 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 483 5.9E-53 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.6E-78 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 SMART SM00319 44 182 3.8E-26 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 SMART SM00283 268 515 3.5E-83 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Pfam PF00672 HAMP domain 218 263 1.9E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 SUPERFAMILY SSF58104 243 518 1.96E-70 T 29-03-2018 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 SUPERFAMILY SSF47170 25 181 7.98E-34 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Gene3D G3DSA:1.10.287.950 330 519 3.5E-46 T 29-03-2018 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 Pfam PF02203 Tar ligand binding domain homologue 1 175 1.6E-41 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS08760 7b6840c77411b73069761c84bc297b37 523 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 29-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CPU03_RS17085 3b28fc7a0dd2a3c47046b62435279c45 734 Gene3D G3DSA:3.40.50.300 132 574 4.6E-40 T 29-03-2018 CPU03_RS17085 3b28fc7a0dd2a3c47046b62435279c45 734 SUPERFAMILY SSF52540 182 571 1.17E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17085 3b28fc7a0dd2a3c47046b62435279c45 734 Pfam PF12615 F sex factor protein N terminal 31 128 4.3E-26 T 29-03-2018 IPR022585 TraD coupling protein, N-terminal CPU03_RS17085 3b28fc7a0dd2a3c47046b62435279c45 734 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 575 3.6E-241 T 29-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 CPU03_RS17085 3b28fc7a0dd2a3c47046b62435279c45 734 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 5.8E-124 T 29-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CPU03_RS07485 d4427fcb2bd7d591d811b86c6cba138a 362 Pfam PF00953 Glycosyl transferase family 4 76 233 8.1E-28 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CPU03_RS07485 d4427fcb2bd7d591d811b86c6cba138a 362 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 9 348 4.6E-163 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CPU03_RS07485 d4427fcb2bd7d591d811b86c6cba138a 362 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 351 28.251 T 29-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CPU03_RS12250 7a89b7639e36e0098f12fedce206eb73 312 SUPERFAMILY SSF53590 3 309 7.72E-99 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS12250 7a89b7639e36e0098f12fedce206eb73 312 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CPU03_RS12250 7a89b7639e36e0098f12fedce206eb73 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 301 4.5E-86 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS12250 7a89b7639e36e0098f12fedce206eb73 312 Gene3D G3DSA:3.90.245.10 1 311 7.6E-109 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS01160 842844b1a668b9d47a854f7b0348a3f7 136 Pfam PF01641 SelR domain 12 126 3.8E-50 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS01160 842844b1a668b9d47a854f7b0348a3f7 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 130 5.7E-53 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS01160 842844b1a668b9d47a854f7b0348a3f7 136 SUPERFAMILY SSF51316 11 130 2.27E-54 T 29-03-2018 IPR011057 Mss4-like CPU03_RS01160 842844b1a668b9d47a854f7b0348a3f7 136 Gene3D G3DSA:2.170.150.20 2 134 3.4E-54 T 29-03-2018 CPU03_RS01160 842844b1a668b9d47a854f7b0348a3f7 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 128 35.839 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 294 3.1E-135 T 29-03-2018 IPR005911 Protein YhcC-like GO:0051536 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 SUPERFAMILY SSF102114 13 255 2.22E-47 T 29-03-2018 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 SMART SM00729 23 247 1.7E-42 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 Pfam PF16199 Radical_SAM C-terminal domain 208 283 1.1E-18 T 29-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 Pfam PF04055 Radical SAM superfamily 43 202 5.5E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS05205 ec314e129c6813754b416eed1d902e49 300 Gene3D G3DSA:3.20.20.70 2 289 8.6E-38 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 Hamap MF_00416 Flagellar P-ring protein [flgI]. 15 379 38.63 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 35 50 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 135 153 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 70 85 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 96 115 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 201 219 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 175 193 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 50 65 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 118 135 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 PRINTS PR01010 Flagellar P-ring protein signature 265 277 3.5E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS02200 17d3b91c1ba465410649318b09b05d30 379 Pfam PF02119 Flagellar P-ring protein 35 378 1.1E-136 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CPU03_RS11555 9c1354b6e9dff1850acbd9f5fc662af4 161 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 142 4.0E-39 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 CPU03_RS11555 9c1354b6e9dff1850acbd9f5fc662af4 161 Pfam PF06711 Protein of unknown function (DUF1198) 1 142 8.7E-64 T 29-03-2018 IPR009587 Protein of unknown function DUF1198 CPU03_RS04500 f46548d7e94c9f81ac19497f02d970fe 308 SUPERFAMILY SSF52540 4 232 1.96E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04500 f46548d7e94c9f81ac19497f02d970fe 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS04500 f46548d7e94c9f81ac19497f02d970fe 308 Gene3D G3DSA:3.40.50.300 1 251 5.3E-64 T 29-03-2018 CPU03_RS04500 f46548d7e94c9f81ac19497f02d970fe 308 Pfam PF00005 ABC transporter 21 165 4.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS04500 f46548d7e94c9f81ac19497f02d970fe 308 SMART SM00382 30 212 4.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 2.4E-22 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 SUPERFAMILY SSF56770 44 189 2.75E-64 T 29-03-2018 CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 5.0E-69 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.142 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 Gene3D G3DSA:3.40.50.700 35 210 4.2E-39 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13310 4ddc5100191f4756758e6b36de4e90f5 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS01175 3b5a533bc7561bd3cb759fc8882b4759 140 SUPERFAMILY SSF52833 3 136 1.79E-39 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS01175 3b5a533bc7561bd3cb759fc8882b4759 140 Pfam PF03960 ArsC family 7 115 1.1E-19 T 29-03-2018 IPR006660 Arsenate reductase-like CPU03_RS01175 3b5a533bc7561bd3cb759fc8882b4759 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 9.2E-43 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CPU03_RS01175 3b5a533bc7561bd3cb759fc8882b4759 140 Gene3D G3DSA:3.40.30.10 1 140 2.0E-44 T 29-03-2018 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 3.7E-93 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 3.2E-20 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 PIRSF PIRSF000190 1 217 2.1E-83 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 2.1E-23 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 37.771 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 Gene3D G3DSA:2.30.110.10 17 217 1.7E-69 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS16295 07609b020f6ffa467e143bd5b992dd86 217 SUPERFAMILY SSF50475 20 217 4.3E-67 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS07380 7d657f7d3032109303b1513b4196476e 849 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 243 254 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CPU03_RS07380 7d657f7d3032109303b1513b4196476e 849 Pfam PF01295 Adenylate cyclase, class-I 229 826 1.3E-263 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CPU03_RS07380 7d657f7d3032109303b1513b4196476e 849 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 600 614 - T 29-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CPU03_RS07380 7d657f7d3032109303b1513b4196476e 849 PIRSF PIRSF001444 1 845 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CPU03_RS07380 7d657f7d3032109303b1513b4196476e 849 Pfam PF12633 Adenylate cyclase NT domain 5 201 9.6E-80 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CPU03_RS11920 67acc250acadcc47686bc81cfa072377 435 Gene3D G3DSA:2.60.40.10 130 236 3.7E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS11920 67acc250acadcc47686bc81cfa072377 435 Gene3D G3DSA:3.10.100.10 334 434 8.0E-17 T 29-03-2018 IPR016186 C-type lectin-like/link domain CPU03_RS11920 67acc250acadcc47686bc81cfa072377 435 SUPERFAMILY SSF49373 250 330 9.42E-8 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS11920 67acc250acadcc47686bc81cfa072377 435 Pfam PF09134 Invasin, domain 3 133 235 3.2E-17 T 29-03-2018 IPR015217 Invasin, domain 3 CPU03_RS11920 67acc250acadcc47686bc81cfa072377 435 SUPERFAMILY SSF49373 133 233 2.88E-14 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS00985 1d4fc3bf73c9392310ec58ce2f20584a 142 Gene3D G3DSA:3.10.129.10 2 134 3.7E-35 T 29-03-2018 CPU03_RS00985 1d4fc3bf73c9392310ec58ce2f20584a 142 SUPERFAMILY SSF54637 7 131 4.17E-40 T 29-03-2018 IPR029069 HotDog domain CPU03_RS00985 1d4fc3bf73c9392310ec58ce2f20584a 142 Pfam PF03061 Thioesterase superfamily 26 97 4.0E-20 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CPU03_RS05125 cc6d3ab31a13643f977171caa5e6c568 189 Gene3D G3DSA:3.90.950.10 1 170 1.2E-51 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS05125 cc6d3ab31a13643f977171caa5e6c568 189 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 163 4.3E-44 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase CPU03_RS05125 cc6d3ab31a13643f977171caa5e6c568 189 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 170 26.94 T 29-03-2018 IPR002786 Non-canonical purine NTP phosphatase CPU03_RS05125 cc6d3ab31a13643f977171caa5e6c568 189 SUPERFAMILY SSF52972 1 164 6.98E-51 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS05125 cc6d3ab31a13643f977171caa5e6c568 189 Pfam PF01931 Protein of unknown function DUF84 7 164 7.1E-48 T 29-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 107 276 2.3E-29 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 TIGRFAM TIGR01334 modD: modD protein 2 278 1.2E-115 T 29-03-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 Gene3D G3DSA:3.90.1170.20 5 126 5.8E-23 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 SUPERFAMILY SSF51690 107 277 2.98E-36 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 2.2E-19 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 PIRSF PIRSF006250 1 280 1.5E-64 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 SUPERFAMILY SSF54675 2 105 1.92E-22 T 29-03-2018 CPU03_RS12020 1e3000595318438a9e08f4e8922460cb 282 Gene3D G3DSA:3.20.20.70 127 269 1.9E-20 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05965 b2688f5430e0a92321e2cfd9e2b28959 331 Pfam PF01136 Peptidase family U32 76 330 1.5E-65 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS05965 b2688f5430e0a92321e2cfd9e2b28959 331 SUPERFAMILY SSF51391 11 162 2.54E-5 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS05965 b2688f5430e0a92321e2cfd9e2b28959 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS05965 b2688f5430e0a92321e2cfd9e2b28959 331 Gene3D G3DSA:3.20.20.150 9 325 4.8E-20 T 29-03-2018 CPU03_RS07640 0eeaa497e8c58397ed4071a80a6c5e99 258 SUPERFAMILY SSF53448 2 147 4.59E-25 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07640 0eeaa497e8c58397ed4071a80a6c5e99 258 Pfam PF00535 Glycosyl transferase family 2 6 126 3.4E-14 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS07640 0eeaa497e8c58397ed4071a80a6c5e99 258 Gene3D G3DSA:3.90.550.10 1 204 2.9E-23 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS11595 d5687e88be3584fc3092af93fb967a05 98 Gene3D G3DSA:3.30.70.1060 1 87 5.1E-14 T 29-03-2018 CPU03_RS11595 d5687e88be3584fc3092af93fb967a05 98 SUPERFAMILY SSF54909 3 85 6.43E-18 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS11595 d5687e88be3584fc3092af93fb967a05 98 Pfam PF03795 YCII-related domain 6 84 4.6E-12 T 29-03-2018 IPR005545 YCII-related CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 Pfam PF01750 Hydrogenase maturation protease 23 151 1.3E-38 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 SUPERFAMILY SSF53163 5 162 8.89E-43 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 7.6E-60 T 29-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 8.6E-43 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 PRINTS PR00446 Hydrogen uptake protein signature 38 55 1.7E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 PRINTS PR00446 Hydrogen uptake protein signature 70 86 1.7E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 PRINTS PR00446 Hydrogen uptake protein signature 18 29 1.7E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 PRINTS PR00446 Hydrogen uptake protein signature 6 18 1.7E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 PRINTS PR00446 Hydrogen uptake protein signature 59 69 1.7E-29 T 29-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CPU03_RS10345 95f0beab8cef5cd923226077ee9b0ef3 197 Gene3D G3DSA:3.40.50.1450 4 166 4.1E-42 T 29-03-2018 IPR023430 Peptidase HybD-like domain CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 SMART SM01329 6 355 1.2E-195 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 SUPERFAMILY SSF53659 2 359 1.98E-119 T 29-03-2018 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 9.3E-131 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 6.0E-162 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 Gene3D G3DSA:3.40.718.10 1 363 6.3E-126 T 29-03-2018 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CPU03_RS04750 91a91a45d129e4324fe03b11cc4e8de1 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 50.494 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CPU03_RS14185 ee170db3ef063661a725e9f55c8b0511 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 18 139 7.8E-5 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS14185 ee170db3ef063661a725e9f55c8b0511 150 Gene3D G3DSA:3.40.930.10 10 144 3.0E-5 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS14185 ee170db3ef063661a725e9f55c8b0511 150 SUPERFAMILY SSF55804 13 138 4.19E-7 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 Gene3D G3DSA:1.10.3370.10 12 439 1.1E-160 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.087 T 29-03-2018 IPR026593 Protein translocase subunit SecY CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 Pfam PF00344 SecY translocase 76 417 8.3E-120 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 SUPERFAMILY SSF103491 16 424 1.96E-134 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.7E-141 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PIRSF PIRSF004557 11 441 2.9E-124 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.7E-99 T 29-03-2018 CPU03_RS09480 bce1e051a10c0ed3665e71303fe9cda0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.7E-99 T 29-03-2018 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 Pfam PF00005 ABC transporter 382 527 1.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 Gene3D G3DSA:3.40.50.300 349 602 1.0E-61 T 29-03-2018 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 569 1.8E-189 T 29-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 SMART SM00382 388 579 1.3E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 SUPERFAMILY SSF52540 371 588 3.37E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 Gene3D G3DSA:1.20.1560.10 5 338 9.7E-40 T 29-03-2018 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 Pfam PF00664 ABC transporter transmembrane region 26 291 8.7E-41 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS14120 42de80f6bf207d5975b8e3c6a71cd78f 602 SUPERFAMILY SSF90123 12 329 2.09E-51 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 1.3E-95 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 SUPERFAMILY SSF56655 1 242 6.54E-72 T 29-03-2018 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 Pfam PF00459 Inositol monophosphatase family 3 232 5.5E-47 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 Gene3D G3DSA:3.40.190.80 149 245 1.3E-33 T 29-03-2018 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 Gene3D G3DSA:3.30.540.10 1 148 1.2E-38 T 29-03-2018 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.4E-9 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 3.4E-9 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 3.4E-9 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS06180 2131468839b2432d8bedc7ac1e83e70e 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 SUPERFAMILY SSF56112 94 158 1.5E-47 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 SUPERFAMILY SSF56112 193 435 1.5E-47 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 Pfam PF03109 ABC1 family 112 230 1.0E-33 T 29-03-2018 IPR004147 UbiB domain CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.405 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 Gene3D G3DSA:3.30.200.20 103 244 1.7E-20 T 29-03-2018 CPU03_RS07230 58b4a2f5dbba3a832c7dfb444c8cc846 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 444 7.7E-177 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 Pfam PF00825 Ribonuclease P 6 111 1.1E-32 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.574 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 Gene3D G3DSA:3.30.230.10 1 119 8.1E-32 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 3.1E-36 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 3.0E-40 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CPU03_RS08195 88c16d9a8a0cd8e412b7c8d59beed4de 119 SUPERFAMILY SSF54211 5 114 2.07E-30 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS10160 acaf6f7d636df6f94bbd496bfbd185c2 113 PIRSF PIRSF000699 1 103 2.1E-30 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CPU03_RS10160 acaf6f7d636df6f94bbd496bfbd185c2 113 SUPERFAMILY SSF46973 3 99 5.89E-30 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CPU03_RS10160 acaf6f7d636df6f94bbd496bfbd185c2 113 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 98 4.5E-29 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CPU03_RS10160 acaf6f7d636df6f94bbd496bfbd185c2 113 Gene3D G3DSA:1.20.58.80 2 100 4.6E-31 T 29-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 Gene3D G3DSA:3.90.1150.10 289 403 8.6E-28 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.2E-204 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 Pfam PF00202 Aminotransferase class-III 25 399 4.2E-130 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 SUPERFAMILY SSF53383 15 400 8.74E-126 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 4.9E-150 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 Gene3D G3DSA:3.40.640.10 59 288 3.2E-77 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.794 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 PIRSF PIRSF000521 173 402 8.9E-36 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS09295 b194dd4652c0adb288bd98ee53999c56 407 PIRSF PIRSF000521 23 158 9.1E-7 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CPU03_RS16375 ac52d05a9d3e704cf114c04e126fae37 333 Gene3D G3DSA:3.20.20.140 3 331 3.3E-71 T 29-03-2018 CPU03_RS16375 ac52d05a9d3e704cf114c04e126fae37 333 Pfam PF00962 Adenosine/AMP deaminase 7 328 6.5E-91 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CPU03_RS16375 ac52d05a9d3e704cf114c04e126fae37 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 328 1.3E-109 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CPU03_RS16375 ac52d05a9d3e704cf114c04e126fae37 333 SUPERFAMILY SSF51556 5 325 4.0E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS16375 ac52d05a9d3e704cf114c04e126fae37 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.146 T 29-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CPU03_RS03775 9e4d130f3351ff1a90667b11f61c4b0e 262 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 251 2.8E-31 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS03775 9e4d130f3351ff1a90667b11f61c4b0e 262 SUPERFAMILY SSF56524 59 261 2.22E-64 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS03775 9e4d130f3351ff1a90667b11f61c4b0e 262 Gene3D G3DSA:3.90.420.10 50 262 4.2E-58 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 Gene3D G3DSA:3.20.20.80 1 466 6.8E-171 T 29-03-2018 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 1.2E-19 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 1.2E-19 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 1.2E-19 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 425 1.2E-19 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 286 300 1.2E-19 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 SUPERFAMILY SSF51445 2 463 3.57E-167 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 367 375 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 Pfam PF00232 Glycosyl hydrolase family 1 3 463 5.3E-175 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CPU03_RS10465 ed9407dcfeb8fcf97618a29f91b40359 466 TIGRFAM TIGR03356 BGL: beta-galactosidase 3 455 1.0E-152 T 29-03-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092 CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.5E-137 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 Gene3D G3DSA:1.10.10.10 304 375 0.0039 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 Gene3D G3DSA:3.20.20.70 4 303 1.3E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 Pfam PF06969 HemN C-terminal domain 303 364 8.8E-11 T 29-03-2018 IPR010723 HemN, C-terminal CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 SMART SM00729 6 223 7.4E-54 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 SUPERFAMILY SSF102114 5 376 3.14E-109 T 29-03-2018 CPU03_RS06630 dc9cfed18853296cbb456b4b33d177f1 376 Pfam PF04055 Radical SAM superfamily 11 179 8.1E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PIRSF PIRSF000350 1 439 2.9E-92 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 132 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 7.2E-47 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.6E-28 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 3.6E-28 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 3.6E-28 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 3.6E-28 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 3.6E-28 T 29-03-2018 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 SUPERFAMILY SSF55424 324 437 7.56E-32 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Gene3D G3DSA:3.30.390.30 327 441 2.7E-30 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 435 3.6E-26 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Gene3D G3DSA:3.50.50.60 1 137 1.9E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Gene3D G3DSA:3.50.50.60 138 260 4.3E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Gene3D G3DSA:3.50.50.60 261 305 9.0E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 299 3.5E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS01835 90da2108613f5970d7e2a365c66533a3 441 SUPERFAMILY SSF51905 2 297 1.73E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 Gene3D G3DSA:3.40.50.150 154 265 9.0E-15 T 29-03-2018 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 247 2.8E-62 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.5E-15 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.5E-15 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 174 186 1.5E-15 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.5E-15 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 Gene3D G3DSA:1.10.1020.10 57 153 1.2E-31 T 29-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 PIRSF PIRSF000398 1 268 2.3E-59 T 29-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 SUPERFAMILY SSF53335 4 264 5.26E-69 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05735 c2a50236bc18d4727735c6385b477e89 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 4 264 2.4E-86 T 29-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CPU03_RS05330 66c2ce51f0917d8760f5de0374ed2304 329 Pfam PF01699 Sodium/calcium exchanger protein 4 144 1.3E-28 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CPU03_RS05330 66c2ce51f0917d8760f5de0374ed2304 329 Pfam PF01699 Sodium/calcium exchanger protein 175 319 1.4E-27 T 29-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CPU03_RS05330 66c2ce51f0917d8760f5de0374ed2304 329 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 314 2.8E-86 T 29-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 44 53 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 104 116 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 130 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 156 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 5.3E-33 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 48 244 8.4E-96 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 85 104 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 46 65 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 65 85 1.2E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS14375 235e9a8237b9e27963ad6b04c5f2ce72 246 Pfam PF00813 FliP family 49 240 1.7E-80 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.9E-125 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 SUPERFAMILY SSF56014 265 355 3.49E-10 T 29-03-2018 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 PIRSF PIRSF004640 1 364 5.1E-147 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 Pfam PF04551 GcpE protein 13 354 1.4E-130 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 SUPERFAMILY SSF51604 24 138 4.24E-9 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.718 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CPU03_RS11355 a8e982e2d6cbbae76950544a92704801 373 Gene3D G3DSA:3.20.20.120 17 185 1.8E-18 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS12190 78aa8852bd3a70e14d830f95965731b5 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 27.6 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CPU03_RS12190 78aa8852bd3a70e14d830f95965731b5 87 SUPERFAMILY SSF117991 1 87 9.42E-33 T 29-03-2018 IPR027471 YbeD-like domain CPU03_RS12190 78aa8852bd3a70e14d830f95965731b5 87 Gene3D G3DSA:3.30.70.260 5 87 9.5E-33 T 29-03-2018 CPU03_RS12190 78aa8852bd3a70e14d830f95965731b5 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 8.3E-31 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 CPU03_RS06160 2a013f0d79f95f95db409c8be38192fc 578 Pfam PF01103 Surface antigen 282 575 5.1E-30 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CPU03_RS06160 2a013f0d79f95f95db409c8be38192fc 578 Gene3D G3DSA:2.40.160.50 223 577 2.0E-55 T 29-03-2018 CPU03_RS06160 2a013f0d79f95f95db409c8be38192fc 578 Pfam PF17243 POTRA domain TamA domain 1 26 100 7.0E-19 T 29-03-2018 IPR035243 TamA, POTRA domain 1 CPU03_RS06160 2a013f0d79f95f95db409c8be38192fc 578 Gene3D G3DSA:3.10.20.310 102 189 6.9E-14 T 29-03-2018 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.0E-78 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 242 260 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 408 424 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 147 176 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 183 205 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 267 283 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 298 314 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PRINTS PR00072 Malic enzyme signature 87 111 4.6E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 SUPERFAMILY SSF53223 7 270 2.52E-108 T 29-03-2018 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 SMART SM00919 271 531 2.6E-133 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 SMART SM01274 81 261 3.1E-107 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 SUPERFAMILY SSF51735 271 562 5.91E-94 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.1E-101 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 PIRSF PIRSF000106 3 563 7.7E-228 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.296 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 Gene3D G3DSA:3.40.50.10380 15 268 8.1E-114 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CPU03_RS02540 7a76ca0fbff1f860980fd306af024028 565 Gene3D G3DSA:3.40.50.720 269 565 2.3E-106 T 29-03-2018 CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 172 4.6E-36 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 Pfam PF02834 LigT like Phosphoesterase 10 87 5.8E-14 T 29-03-2018 IPR014051 Phosphoesterase, HXTX CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 Pfam PF02834 LigT like Phosphoesterase 94 162 2.0E-6 T 29-03-2018 IPR014051 Phosphoesterase, HXTX CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 SUPERFAMILY SSF55144 4 172 2.41E-42 T 29-03-2018 IPR009097 Cyclic phosphodiesterase CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 172 21.011 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CPU03_RS04390 5f2c47e76fb0cb450bf6c18ad8629b09 179 Gene3D G3DSA:3.90.1140.10 1 179 4.4E-30 T 29-03-2018 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 Gene3D G3DSA:3.90.76.10 69 188 3.8E-30 T 29-03-2018 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 SUPERFAMILY SSF53850 46 549 1.9E-143 T 29-03-2018 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 PIRSF PIRSF002741 14 552 2.7E-107 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 Gene3D G3DSA:3.40.190.10 189 322 2.3E-33 T 29-03-2018 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 Gene3D G3DSA:3.10.105.10 323 523 4.1E-57 T 29-03-2018 CPU03_RS06635 f553c46ceee36d6660e01a2e7cbd1e43 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 474 1.3E-78 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS10725 a6f6e989da84f6c5a82bb3623e4dd99a 498 SUPERFAMILY SSF56672 33 328 4.96E-19 T 29-03-2018 CPU03_RS10725 a6f6e989da84f6c5a82bb3623e4dd99a 498 Gene3D G3DSA:3.30.70.270 41 308 5.8E-24 T 29-03-2018 CPU03_RS10725 a6f6e989da84f6c5a82bb3623e4dd99a 498 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 95 308 6.8E-28 T 29-03-2018 IPR000477 Reverse transcriptase domain CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.149 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 SUPERFAMILY SSF52540 154 337 6.24E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 SUPERFAMILY SSF82051 2 157 3.14E-56 T 29-03-2018 IPR006169 GTP1/OBG domain CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.1E-147 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 Gene3D G3DSA:3.40.50.300 159 379 4.5E-33 T 29-03-2018 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 Pfam PF01018 GTP1/OBG 4 156 2.8E-59 T 29-03-2018 IPR006169 GTP1/OBG domain CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 9.5E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 Gene3D G3DSA:2.70.210.12 2 156 1.5E-57 T 29-03-2018 IPR006169 GTP1/OBG domain CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-34 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS06090 67407366da560d8f761ef41cfa54a030 391 PIRSF PIRSF002401 1 378 3.0E-141 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type CPU03_RS15275 57253841f4bd9ca04407e5465f8c5824 277 SUPERFAMILY SSF161098 66 255 2.35E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15275 57253841f4bd9ca04407e5465f8c5824 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 7.1E-115 T 29-03-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 CPU03_RS15275 57253841f4bd9ca04407e5465f8c5824 277 Gene3D G3DSA:1.10.3720.10 3 261 8.4E-33 T 29-03-2018 CPU03_RS15275 57253841f4bd9ca04407e5465f8c5824 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 1.3E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS09160 cdf34d791f2b347165b5bacf7b85848c 146 Pfam PF00581 Rhodanese-like domain 42 128 4.2E-10 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09160 cdf34d791f2b347165b5bacf7b85848c 146 SMART SM00450 37 133 1.0E-7 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09160 cdf34d791f2b347165b5bacf7b85848c 146 Gene3D G3DSA:3.40.250.10 20 143 3.6E-19 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS09160 cdf34d791f2b347165b5bacf7b85848c 146 SUPERFAMILY SSF52821 35 141 8.91E-22 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.347 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Gene3D G3DSA:1.10.10.10 222 284 7.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.3E-5 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 1.5E-128 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 SUPERFAMILY SSF88946 12 122 6.15E-39 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Pfam PF04545 Sigma-70, region 4 228 280 4.8E-17 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Gene3D G3DSA:1.10.601.10 12 122 5.7E-33 T 29-03-2018 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 SUPERFAMILY SSF88659 199 283 3.74E-19 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 7.7E-36 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 6.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 6.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 6.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 6.9E-19 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 PIRSF PIRSF000770 6 284 3.0E-32 T 29-03-2018 CPU03_RS08955 b22bde4a7c27b4d09921b673504d6f97 284 Pfam PF04542 Sigma-70 region 2 53 122 2.6E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CPU03_RS10915 ab5f8988ecfd046600ead45409c5feeb 238 Pfam PF03741 Integral membrane protein TerC family 16 202 7.5E-52 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 Gene3D G3DSA:3.80.30.20 138 379 2.7E-46 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 Gene3D G3DSA:2.40.50.140 380 441 8.6E-21 T 29-03-2018 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 SUPERFAMILY SSF102114 111 371 3.4E-53 T 29-03-2018 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 92 8.4E-21 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 SMART SM00729 140 365 8.7E-53 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 Pfam PF04055 Radical SAM superfamily 146 323 1.0E-29 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 62.12 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 2.1E-107 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CPU03_RS13830 66e379b49ad4329e38e31ac1d92b02f5 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 3.9E-190 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CPU03_RS11980 7228d7156d8a4109cb4cf486cbc50b98 143 SUPERFAMILY SSF55874 35 123 6.52E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11980 7228d7156d8a4109cb4cf486cbc50b98 143 Gene3D G3DSA:3.30.565.10 20 124 1.7E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS11980 7228d7156d8a4109cb4cf486cbc50b98 143 Pfam PF13581 Histidine kinase-like ATPase domain 11 134 1.8E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 SUPERFAMILY SSF90123 7 322 4.71E-41 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 Gene3D G3DSA:3.40.50.300 329 576 5.2E-67 T 29-03-2018 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 Pfam PF00664 ABC transporter transmembrane region 83 287 5.1E-10 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 SMART SM00382 367 551 1.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 535 3.1E-154 T 29-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 SUPERFAMILY SSF52540 338 575 1.07E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 Pfam PF00005 ABC transporter 358 504 8.8E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14115 0e31dfaceee887cf7d12141ecdab7f5d 576 Gene3D G3DSA:1.20.1560.10 1 328 1.5E-30 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 PRINTS PR01036 Tetracycline resistance protein TetB signature 77 99 3.4E-5 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 3.4E-5 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 3.4E-5 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 3.4E-5 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 Gene3D G3DSA:1.20.1250.20 272 536 1.2E-16 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 Gene3D G3DSA:1.20.1250.20 3 201 8.4E-22 T 29-03-2018 CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 SUPERFAMILY SSF103473 264 436 2.75E-39 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 SUPERFAMILY SSF103473 8 204 2.75E-39 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS08555 07428c06d93974498db87ba0c0982467 540 Pfam PF07690 Major Facilitator Superfamily 19 422 5.7E-25 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 Gene3D G3DSA:3.40.50.360 4 170 3.1E-40 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 PIRSF PIRSF038996 1 172 2.7E-71 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 SUPERFAMILY SSF52218 4 170 4.33E-54 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 2.1E-76 T 29-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 Pfam PF00258 Flavodoxin 6 160 2.8E-32 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CPU03_RS12405 cb00c4a202ee982b19b0749feb046f24 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CPU03_RS01700 3646210ce582727484ef8cff81535e0b 452 Pfam PF03390 2-hydroxycarboxylate transporter family 32 444 3.0E-136 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CPU03_RS01700 3646210ce582727484ef8cff81535e0b 452 PIRSF PIRSF005348 13 451 1.8E-148 T 29-03-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.5E-36 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 418 3.3E-17 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 480 3.1E-237 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Gene3D G3DSA:3.30.70.20 198 235 3.9E-19 T 29-03-2018 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 SUPERFAMILY SSF54862 1 479 6.87E-148 T 29-03-2018 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Gene3D G3DSA:3.30.70.20 5 197 1.6E-28 T 29-03-2018 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Gene3D G3DSA:3.30.70.20 236 362 3.0E-24 T 29-03-2018 CPU03_RS06720 e3b01b8dad091b017c58d4722ccae9a0 506 Gene3D G3DSA:3.30.70.20 363 464 7.0E-20 T 29-03-2018 CPU03_RS11635 0d8731e702574b4cdfa920bd45ed0866 80 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.0E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CPU03_RS13500 1b42133105ee7116787424595b5f82ff 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 5.5E-60 T 29-03-2018 IPR006214 Bax inhibitor 1-related CPU03_RS01515 18c659ca8cc57c5d36a149c0afcf97eb 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 5.4E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS01515 18c659ca8cc57c5d36a149c0afcf97eb 194 SUPERFAMILY SSF55729 12 185 9.14E-40 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS01515 18c659ca8cc57c5d36a149c0afcf97eb 194 Gene3D G3DSA:3.40.630.30 6 194 1.2E-28 T 29-03-2018 CPU03_RS09275 34a6488807ac8ad05d3cf8907e6581a4 427 Gene3D G3DSA:2.30.40.10 9 66 1.9E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09275 34a6488807ac8ad05d3cf8907e6581a4 427 SUPERFAMILY SSF51338 7 65 9.97E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS09275 34a6488807ac8ad05d3cf8907e6581a4 427 Pfam PF07969 Amidohydrolase family 47 405 5.3E-53 T 29-03-2018 IPR013108 Amidohydrolase 3 CPU03_RS09275 34a6488807ac8ad05d3cf8907e6581a4 427 Gene3D G3DSA:3.20.20.140 67 365 3.3E-44 T 29-03-2018 CPU03_RS09275 34a6488807ac8ad05d3cf8907e6581a4 427 SUPERFAMILY SSF51556 57 375 2.04E-103 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS05500 a22ab116d8980cfdf78a83b8ab794442 415 PIRSF PIRSF006060 2 407 1.1E-51 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS05500 a22ab116d8980cfdf78a83b8ab794442 415 Pfam PF13520 Amino acid permease 8 369 3.3E-32 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS02100 ee409b0b3cec5fae510e417657a158e0 545 Pfam PF02470 MlaD protein 158 221 9.8E-9 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS02100 ee409b0b3cec5fae510e417657a158e0 545 Pfam PF02470 MlaD protein 42 133 7.0E-12 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS02100 ee409b0b3cec5fae510e417657a158e0 545 Pfam PF02470 MlaD protein 288 389 3.9E-12 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS09125 ab7d6ad9a35bbd668a71b2e1b848c404 93 Pfam PF04023 FeoA domain 2 67 5.5E-10 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CPU03_RS09125 ab7d6ad9a35bbd668a71b2e1b848c404 93 SMART SM00899 1 73 6.1E-12 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CPU03_RS09125 ab7d6ad9a35bbd668a71b2e1b848c404 93 SUPERFAMILY SSF50037 3 73 1.28E-16 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal CPU03_RS09125 ab7d6ad9a35bbd668a71b2e1b848c404 93 Gene3D G3DSA:2.30.30.90 2 84 1.1E-15 T 29-03-2018 CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 Pfam PF02130 Uncharacterized protein family UPF0054 26 143 2.4E-37 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 Gene3D G3DSA:3.40.390.30 1 155 1.4E-51 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.244 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 SUPERFAMILY SSF55486 3 150 2.17E-48 T 29-03-2018 CPU03_RS12295 fccc9944cd6b9c44a1bb5dc38bdf3b2e 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 1.7E-35 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CPU03_RS05790 e97eacd8346fd7750881930159865b90 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 1.6E-44 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS05790 e97eacd8346fd7750881930159865b90 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 2.1E-79 T 29-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CPU03_RS05790 e97eacd8346fd7750881930159865b90 220 SUPERFAMILY SSF51569 1 215 2.56E-62 T 29-03-2018 CPU03_RS05790 e97eacd8346fd7750881930159865b90 220 Gene3D G3DSA:3.20.20.70 1 220 1.4E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05790 e97eacd8346fd7750881930159865b90 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 Gene3D G3DSA:3.30.465.10 201 282 1.2E-25 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 SUPERFAMILY SSF54631 67 203 4.42E-31 T 29-03-2018 CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 SMART SM01091 206 284 1.7E-27 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 Gene3D G3DSA:3.10.580.10 51 200 4.1E-34 T 29-03-2018 CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 SMART SM00116 79 128 10.0 T 29-03-2018 IPR000644 CBS domain CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 SMART SM00116 142 190 1.6 T 29-03-2018 IPR000644 CBS domain CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 SUPERFAMILY SSF56176 204 286 2.37E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 Pfam PF03471 Transporter associated domain 207 282 1.2E-20 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 Pfam PF00571 CBS domain 142 190 7.2E-5 T 29-03-2018 IPR000644 CBS domain CPU03_RS12290 bad6e6f2fe163d43de9a09a2f7ee2675 295 Pfam PF00571 CBS domain 70 125 2.8E-7 T 29-03-2018 IPR000644 CBS domain CPU03_RS07360 08e51758797c07617c81df8e00c149bc 234 Pfam PF04340 Protein of unknown function, DUF484 12 231 1.2E-67 T 29-03-2018 IPR007435 Protein of unknown function DUF484 CPU03_RS07360 08e51758797c07617c81df8e00c149bc 234 Gene3D G3DSA:3.30.450.40 48 223 5.8E-5 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS00045 693893d8299efad621fad11608d6e315 190 ProSitePatterns PS01293 Nudix CoA signature. 46 66 - T 29-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CPU03_RS00045 693893d8299efad621fad11608d6e315 190 Pfam PF00293 NUDIX domain 29 142 2.2E-10 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS00045 693893d8299efad621fad11608d6e315 190 Gene3D G3DSA:3.90.79.10 2 189 7.2E-39 T 29-03-2018 CPU03_RS00045 693893d8299efad621fad11608d6e315 190 SUPERFAMILY SSF55811 5 180 2.3E-31 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Gene3D G3DSA:1.10.10.10 2 82 2.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Gene3D G3DSA:3.40.190.10 179 263 2.7E-11 T 29-03-2018 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.2E-111 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 SUPERFAMILY SSF53850 93 290 1.99E-20 T 29-03-2018 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Gene3D G3DSA:3.40.190.10 92 178 3.0E-36 T 29-03-2018 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Pfam PF03466 LysR substrate binding domain 93 289 3.0E-14 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 56.93 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS10560 99852826f4d76385a2c374a98f916bf8 297 SUPERFAMILY SSF46785 4 110 3.73E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02120 576da4b57270fb0ce8b7456717fd784a 255 Gene3D G3DSA:1.10.287.70 109 220 2.4E-15 T 29-03-2018 CPU03_RS02120 576da4b57270fb0ce8b7456717fd784a 255 SUPERFAMILY SSF81324 124 217 5.76E-16 T 29-03-2018 CPU03_RS02120 576da4b57270fb0ce8b7456717fd784a 255 Pfam PF07885 Ion channel 162 215 3.0E-10 T 29-03-2018 IPR013099 Potassium channel domain CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 Pfam PF00326 Prolyl oligopeptidase family 464 677 8.5E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 Gene3D G3DSA:3.40.50.1820 1 134 4.4E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 Gene3D G3DSA:3.40.50.1820 146 683 7.5E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 9 406 1.1E-107 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 SUPERFAMILY SSF53474 417 657 1.02E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 448 466 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 502 521 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 474 498 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 532 552 7.7E-52 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CPU03_RS16855 5789d601a9b0087a8a206af50a54f744 685 SUPERFAMILY SSF50993 3 409 2.17E-90 T 29-03-2018 CPU03_RS03160 5244a5a0143aeeab2cc87b1b616b3711 869 SUPERFAMILY SSF141729 65 173 2.88E-25 T 29-03-2018 CPU03_RS03160 5244a5a0143aeeab2cc87b1b616b3711 869 Pfam PF00577 Outer membrane usher protein 200 776 2.7E-181 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS03160 5244a5a0143aeeab2cc87b1b616b3711 869 Pfam PF13954 PapC N-terminal domain 44 182 1.9E-37 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS03160 5244a5a0143aeeab2cc87b1b616b3711 869 Pfam PF13953 PapC C-terminal domain 785 845 1.7E-13 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 PIRSF PIRSF000164 13 336 1.7E-94 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.871 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 335 7.4E-156 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 Gene3D G3DSA:3.20.20.70 1 336 1.3E-76 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 SUPERFAMILY SSF51395 1 334 8.79E-104 T 29-03-2018 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 334 1.3E-87 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CPU03_RS02140 0315e6ffbbec216b11449d830956bd20 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CPU03_RS13595 d18b333ba592912db5a1189581b044af 139 SUPERFAMILY SSF52402 4 136 2.34E-15 T 29-03-2018 CPU03_RS13595 d18b333ba592912db5a1189581b044af 139 Gene3D G3DSA:3.40.50.620 3 138 3.1E-13 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS13595 d18b333ba592912db5a1189581b044af 139 PIRSF PIRSF006276 1 139 8.7E-24 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS13595 d18b333ba592912db5a1189581b044af 139 Pfam PF00582 Universal stress protein family 4 136 7.2E-7 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS07170 2cfc7e0551ecd4b590147bb0c8b93794 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 3.9E-127 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CPU03_RS07170 2cfc7e0551ecd4b590147bb0c8b93794 483 Pfam PF02386 Cation transport protein 37 477 1.3E-93 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CPU03_RS07170 2cfc7e0551ecd4b590147bb0c8b93794 483 PIRSF PIRSF006247 1 483 3.4E-183 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Pfam PF07732 Multicopper oxidase 54 167 5.4E-22 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Pfam PF07731 Multicopper oxidase 363 472 5.9E-8 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Gene3D G3DSA:2.60.40.420 29 165 1.5E-17 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS06940 e80338b1658503e39660f945b9783006 473 SUPERFAMILY SSF49503 35 167 5.23E-19 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 470 56.56 T 29-03-2018 IPR026589 Cell division protein FtsP GO:0043093 CPU03_RS06940 e80338b1658503e39660f945b9783006 473 SUPERFAMILY SSF49503 325 469 1.49E-14 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Gene3D G3DSA:2.60.40.420 350 473 1.3E-11 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS06940 e80338b1658503e39660f945b9783006 473 Gene3D G3DSA:2.60.40.420 169 305 1.1E-25 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS06940 e80338b1658503e39660f945b9783006 473 SUPERFAMILY SSF49503 173 289 6.49E-30 T 29-03-2018 IPR008972 Cupredoxin CPU03_RS09915 a71a82c900554599e9ab6204b438fbf4 280 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CPU03_RS09915 a71a82c900554599e9ab6204b438fbf4 280 Gene3D G3DSA:3.60.110.10 1 277 1.3E-66 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS09915 a71a82c900554599e9ab6204b438fbf4 280 Pfam PF00795 Carbon-nitrogen hydrolase 6 239 8.4E-46 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS09915 a71a82c900554599e9ab6204b438fbf4 280 SUPERFAMILY SSF56317 2 267 7.72E-70 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS15140 9f0dea7a0989cca3690aac3e2f89e3d4 389 SUPERFAMILY SSF56059 90 314 7.46E-27 T 29-03-2018 CPU03_RS15140 9f0dea7a0989cca3690aac3e2f89e3d4 389 Gene3D G3DSA:3.30.470.20 106 381 5.9E-24 T 29-03-2018 CPU03_RS13710 04bd277562ed79d7a7093de6f0521f62 476 ProSitePatterns PS00218 Amino acid permeases signature. 53 83 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CPU03_RS13710 04bd277562ed79d7a7093de6f0521f62 476 PIRSF PIRSF006060 11 474 1.5E-67 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS13710 04bd277562ed79d7a7093de6f0521f62 476 Pfam PF00324 Amino acid permease 28 460 1.9E-114 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 109 7.9E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 7.8E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.9E-21 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 PIRSF PIRSF016578 5 84 1.7E-4 T 29-03-2018 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 PIRSF PIRSF016578 241 378 1.9E-7 T 29-03-2018 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 SUPERFAMILY SSF47203 226 379 1.08E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Gene3D G3DSA:1.20.140.10 216 380 6.2E-47 T 29-03-2018 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 SUPERFAMILY SSF56645 1 227 3.66E-52 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Gene3D G3DSA:1.10.540.10 1 114 2.9E-20 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CPU03_RS12125 01aeab0353e0bda7db91148dce8a8da3 380 Gene3D G3DSA:2.40.110.10 115 215 5.9E-24 T 29-03-2018 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 Gene3D G3DSA:3.40.50.10300 185 404 9.2E-72 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.7E-157 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 SUPERFAMILY SSF102645 185 400 1.57E-79 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 SUPERFAMILY SSF52507 3 181 4.58E-60 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 370 7.4E-77 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 Gene3D G3DSA:3.40.50.1950 1 184 7.7E-54 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS07670 b18887201decab432c097a67e5cfc246 405 Pfam PF02441 Flavoprotein 7 178 9.6E-43 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 Gene3D G3DSA:2.60.40.10 35 151 2.7E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 109 126 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 SUPERFAMILY SSF49584 144 235 4.71E-9 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 150 2.2E-31 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 SUPERFAMILY SSF49354 30 150 2.24E-34 T 29-03-2018 IPR008962 PapD-like CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 PRINTS PR00969 Pili chaperone signature 82 103 7.8E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 PRINTS PR00969 Pili chaperone signature 132 147 7.8E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 PRINTS PR00969 Pili chaperone signature 110 127 7.8E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 PRINTS PR00969 Pili chaperone signature 36 45 7.8E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 PRINTS PR00969 Pili chaperone signature 168 183 7.8E-30 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS16990 cd201395b128aa848101c441eec90cff 258 Gene3D G3DSA:2.60.40.10 153 234 4.3E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS05390 714f304169275a44c6e95e509e10ecef 171 Pfam PF01292 Prokaryotic cytochrome b561 2 164 7.0E-14 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS05390 714f304169275a44c6e95e509e10ecef 171 SUPERFAMILY SSF81342 2 166 4.55E-22 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS05390 714f304169275a44c6e95e509e10ecef 171 Gene3D G3DSA:1.20.950.20 1 169 2.4E-20 T 29-03-2018 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 SUPERFAMILY SSF53067 1 309 7.93E-43 T 29-03-2018 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 5.7E-133 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 Gene3D G3DSA:3.30.420.40 1 144 4.4E-43 T 29-03-2018 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 Gene3D G3DSA:3.30.420.40 145 289 1.7E-18 T 29-03-2018 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.8E-52 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 Pfam PF00814 Glycoprotease family 24 307 2.2E-101 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.3E-123 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.472 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS05560 5d15be708b8c7fb49d86925eca3a22d5 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 29-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CPU03_RS00035 bc49e016032f9e6d2a068d070562f77c 67 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 57 17.693 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 CPU03_RS00035 bc49e016032f9e6d2a068d070562f77c 67 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.1E-23 T 29-03-2018 IPR005371 Uncharacterised protein family UPF0181 CPU03_RS00035 bc49e016032f9e6d2a068d070562f77c 67 Gene3D G3DSA:3.30.70.1440 2 62 5.9E-4 T 29-03-2018 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 PIRSF PIRSF004846 2 255 3.0E-78 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 251 4.3E-77 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 Pfam PF13531 Bacterial extracellular solute-binding protein 27 252 3.5E-47 T 29-03-2018 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 SUPERFAMILY SSF53850 25 254 6.34E-70 T 29-03-2018 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 Gene3D G3DSA:3.40.190.10 22 118 1.8E-16 T 29-03-2018 CPU03_RS12690 4bf4da1ee00affba4fda98b9761aadd4 255 Gene3D G3DSA:3.40.190.10 119 216 6.8E-33 T 29-03-2018 CPU03_RS03800 0f43d171eee845d2feb07ac10d9e37db 498 Pfam PF03577 Peptidase family C69 23 420 3.7E-121 T 29-03-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 CPU03_RS03800 0f43d171eee845d2feb07ac10d9e37db 498 Gene3D G3DSA:3.60.60.10 21 310 2.3E-40 T 29-03-2018 CPU03_RS16910 219ed7654cb19a1b8a02516901f3ce81 313 Gene3D G3DSA:1.10.1220.10 1 39 1.1E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS16910 219ed7654cb19a1b8a02516901f3ce81 313 Gene3D G3DSA:1.10.260.40 56 142 0.001 T 29-03-2018 CPU03_RS16910 219ed7654cb19a1b8a02516901f3ce81 313 SUPERFAMILY SSF47598 2 44 1.33E-5 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CPU03_RS14745 418b1b2c2279506bc2e4bb79c9c68d18 284 Pfam PF02146 Sir2 family 52 225 4.6E-50 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 CPU03_RS14745 418b1b2c2279506bc2e4bb79c9c68d18 284 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 45 275 60.88 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CPU03_RS14745 418b1b2c2279506bc2e4bb79c9c68d18 284 SUPERFAMILY SSF52467 46 274 4.36E-74 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS14745 418b1b2c2279506bc2e4bb79c9c68d18 284 Gene3D G3DSA:3.40.50.1220 39 277 1.3E-53 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 Gene3D G3DSA:3.30.160.20 10 72 4.1E-28 T 29-03-2018 CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 Gene3D G3DSA:3.30.230.10 76 166 4.1E-34 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 SUPERFAMILY SSF54211 79 159 7.33E-27 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.7E-29 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 6.4E-71 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.4E-30 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 SUPERFAMILY SSF54768 9 75 5.02E-24 T 29-03-2018 CPU03_RS09465 dcbd515c9b56eb5e3721bbe999c665ec 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.037 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 Pfam PF00572 Ribosomal protein L13 15 138 4.0E-56 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 Gene3D G3DSA:3.90.1180.10 1 142 1.0E-61 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.5E-66 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 PIRSF PIRSF002181 1 142 2.7E-50 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 SUPERFAMILY SSF52161 1 140 6.41E-60 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CPU03_RS05270 d083a8370727a552c11522bf2ae9de2d 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.246 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CPU03_RS06885 89a2a2dea76605ca95548b2e46524ccb 424 SUPERFAMILY SSF56935 25 424 7.78E-139 T 29-03-2018 CPU03_RS06885 89a2a2dea76605ca95548b2e46524ccb 424 Gene3D G3DSA:2.40.170.10 25 424 9.7E-153 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS06885 89a2a2dea76605ca95548b2e46524ccb 424 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 420 5.0E-159 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS06885 89a2a2dea76605ca95548b2e46524ccb 424 Pfam PF02264 LamB porin 27 424 9.1E-141 T 29-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 13 252 42.046 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 SUPERFAMILY SSF53335 30 252 4.34E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 14 252 1.0E-124 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 Gene3D G3DSA:3.40.50.150 28 256 3.2E-40 T 29-03-2018 CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 PIRSF PIRSF006325 11 253 5.3E-127 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CPU03_RS01475 1c23582857e8ee0983b59f1c5004d771 256 Pfam PF13649 Methyltransferase domain 70 168 9.4E-12 T 29-03-2018 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 SUPERFAMILY SSF51905 265 382 2.66E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 SUPERFAMILY SSF51905 2 175 2.66E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 2.5E-125 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 Pfam PF01494 FAD binding domain 2 345 3.2E-21 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.6E-136 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 Gene3D G3DSA:3.50.50.60 2 352 2.5E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.3E-13 T 29-03-2018 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.3E-13 T 29-03-2018 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.3E-13 T 29-03-2018 CPU03_RS10600 a9b175ad220ca8a77bf7ce0aaff16dbb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.3E-13 T 29-03-2018 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 Pfam PF01553 Acyltransferase 282 424 8.5E-26 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 SUPERFAMILY SSF69593 242 488 1.24E-24 T 29-03-2018 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 Gene3D G3DSA:3.40.1130.10 235 525 5.6E-36 T 29-03-2018 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 PIRSF PIRSF500064 2 814 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 32.537 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 SMART SM00563 300 427 2.7E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CPU03_RS06860 becf1e10ec707f2bf03a97a7ccb6c9f3 818 PIRSF PIRSF000437 19 813 0.0 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 Gene3D G3DSA:3.50.50.60 29 267 3.5E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 Gene3D G3DSA:3.90.660.10 268 407 7.9E-39 T 29-03-2018 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 SUPERFAMILY SSF54373 294 401 4.84E-30 T 29-03-2018 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 Pfam PF01593 Flavin containing amine oxidoreductase 43 451 1.0E-85 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 SUPERFAMILY SSF51905 31 313 1.13E-73 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS15325 9bbc993f9490f72e8d170d39db579b2e 454 SUPERFAMILY SSF51905 414 453 1.13E-73 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12130 6fa81e18521f4e5cd1497e4cc6f7f49a 406 Gene3D G3DSA:3.40.50.10540 7 406 1.9E-85 T 29-03-2018 IPR023606 CoA-transferase family III domain CPU03_RS12130 6fa81e18521f4e5cd1497e4cc6f7f49a 406 Pfam PF02515 CoA-transferase family III 13 379 1.6E-80 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 CPU03_RS12130 6fa81e18521f4e5cd1497e4cc6f7f49a 406 SUPERFAMILY SSF89796 7 402 2.09E-100 T 29-03-2018 IPR023606 CoA-transferase family III domain CPU03_RS02610 348b54a1c648c5935467d53a7f451c73 394 Pfam PF07670 Nucleoside recognition 92 189 1.0E-5 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS02610 348b54a1c648c5935467d53a7f451c73 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 1.5E-58 T 29-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CPU03_RS02610 348b54a1c648c5935467d53a7f451c73 394 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 393 1.4E-133 T 29-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CPU03_RS02610 348b54a1c648c5935467d53a7f451c73 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.3E-18 T 29-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CPU03_RS03365 7536e2d407e82958c8ac2469269edc14 493 Gene3D G3DSA:1.20.1250.20 3 209 7.2E-23 T 29-03-2018 CPU03_RS03365 7536e2d407e82958c8ac2469269edc14 493 Pfam PF07690 Major Facilitator Superfamily 18 366 3.5E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS03365 7536e2d407e82958c8ac2469269edc14 493 SUPERFAMILY SSF103473 12 404 3.4E-42 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS03365 7536e2d407e82958c8ac2469269edc14 493 Gene3D G3DSA:1.20.1250.20 210 408 4.1E-17 T 29-03-2018 CPU03_RS03365 7536e2d407e82958c8ac2469269edc14 493 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 8.6E-121 T 29-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 SUPERFAMILY SSF46767 76 158 1.02E-28 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 157 37.73 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 SUPERFAMILY SSF53155 1 82 2.75E-17 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 78 158 1.7E-29 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 77 156 3.6E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 Gene3D G3DSA:1.10.10.10 72 159 6.5E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 127 133 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CPU03_RS13945 7bcc849d89f622d8648008725a870bd1 162 Gene3D G3DSA:3.30.160.70 1 71 1.6E-14 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 SMART SM00842 10 196 3.5E-96 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Gene3D G3DSA:3.30.420.40 197 247 2.9E-6 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Gene3D G3DSA:3.90.640.10 248 300 1.1E-19 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 SUPERFAMILY SSF53067 198 384 1.52E-47 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 PIRSF PIRSF003101 1 418 2.2E-154 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 SUPERFAMILY SSF53067 8 221 2.33E-61 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Gene3D G3DSA:3.30.420.40 2 186 4.7E-34 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-25 T 29-03-2018 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 8.5E-162 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.547 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CPU03_RS04650 52f1be74100d70f529a1146624292a88 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 5.2E-30 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CPU03_RS01575 783a6be71622f4819b40724b636708e2 161 Pfam PF03928 Haem-degrading 22 148 4.4E-34 T 29-03-2018 IPR005624 Haem-degrading CPU03_RS01575 783a6be71622f4819b40724b636708e2 161 SUPERFAMILY SSF143744 14 152 1.7E-28 T 29-03-2018 CPU03_RS01575 783a6be71622f4819b40724b636708e2 161 Hamap MF_00761 UPF0303 protein . 1 155 33.307 T 29-03-2018 IPR010371 Uncharacterised protein family UPF0303 CPU03_RS01575 783a6be71622f4819b40724b636708e2 161 PIRSF PIRSF008757 1 161 5.9E-59 T 29-03-2018 IPR010371 Uncharacterised protein family UPF0303 CPU03_RS01410 e8dfdd99ac1cbe471f87731473ac12e2 258 Pfam PF00005 ABC transporter 25 154 1.1E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS01410 e8dfdd99ac1cbe471f87731473ac12e2 258 SMART SM00382 34 204 9.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01410 e8dfdd99ac1cbe471f87731473ac12e2 258 SUPERFAMILY SSF52540 7 231 1.0E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01410 e8dfdd99ac1cbe471f87731473ac12e2 258 Gene3D G3DSA:3.40.50.300 1 242 7.8E-54 T 29-03-2018 CPU03_RS02130 cbd19550427ed80fbe012f9f7be00bd4 125 Pfam PF13436 Glycine-zipper domain 37 72 0.0021 T 29-03-2018 IPR025693 Glycine-zipper-containing OmpA-like membrane domain CPU03_RS02130 cbd19550427ed80fbe012f9f7be00bd4 125 Pfam PF13436 Glycine-zipper domain 105 124 0.16 T 29-03-2018 IPR025693 Glycine-zipper-containing OmpA-like membrane domain CPU03_RS02130 cbd19550427ed80fbe012f9f7be00bd4 125 Hamap MF_01455 UPF0757 protein YmgG [ymgG]. 12 125 26.491 T 29-03-2018 IPR022833 Uncharacterised protein family UPF0757, YmgG CPU03_RS03405 56b29dff9f59b5fc7966cd5d227499eb 256 Pfam PF02361 Cobalt transport protein 19 210 2.7E-8 T 29-03-2018 IPR003339 ABC/ECF transporter, transmembrane component CPU03_RS05180 45fa5250d8df1e78267be77c700a533e 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 59.817 T 29-03-2018 IPR023070 DnaA initiator-associating protein CPU03_RS05180 45fa5250d8df1e78267be77c700a533e 196 Gene3D G3DSA:3.40.50.10490 1 196 5.0E-37 T 29-03-2018 CPU03_RS05180 45fa5250d8df1e78267be77c700a533e 196 Pfam PF13580 SIS domain 9 144 5.5E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS05180 45fa5250d8df1e78267be77c700a533e 196 SUPERFAMILY SSF53697 3 191 2.02E-52 T 29-03-2018 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 Gene3D G3DSA:1.10.3720.10 322 530 6.4E-22 T 29-03-2018 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 Gene3D G3DSA:1.10.3720.10 47 266 2.0E-29 T 29-03-2018 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 524 1.2E-225 T 29-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 SUPERFAMILY SSF161098 11 264 1.83E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 366 524 5.6E-6 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 257 1.5E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS04780 1568118f14154e28ce8372bc15b69c3f 535 SUPERFAMILY SSF161098 290 528 1.3E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 Gene3D G3DSA:1.20.58.340 131 248 1.5E-9 T 29-03-2018 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 22 316 1.2E-106 T 29-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 Pfam PF01544 CorA-like Mg2+ transporter protein 27 312 1.7E-55 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 Gene3D G3DSA:3.30.460.20 1 124 6.4E-9 T 29-03-2018 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 Gene3D G3DSA:1.20.58.340 249 316 2.6E-21 T 29-03-2018 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 SUPERFAMILY SSF144083 251 314 7.98E-21 T 29-03-2018 CPU03_RS07340 7f3c3e53be04c11a1fed78aa0b926225 316 SUPERFAMILY SSF143865 1 255 1.96E-37 T 29-03-2018 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 10 261 33.596 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 SUPERFAMILY SSF51366 264 456 1.35E-51 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 264 452 1.4E-45 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Gene3D G3DSA:3.20.20.70 264 458 1.2E-50 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Gene3D G3DSA:3.20.20.70 12 261 5.4E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 SUPERFAMILY SSF51366 10 259 9.42E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Pfam PF00218 Indole-3-glycerol phosphate synthase 12 258 1.4E-90 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CPU03_RS00930 7f7ed8f9ed7c1c8e8032eabd4311f997 458 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 262 458 28.775 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 368 3.8E-9 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 SUPERFAMILY SSF51984 3 94 2.35E-23 T 29-03-2018 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Gene3D G3DSA:3.90.190.20 304 436 5.0E-35 T 29-03-2018 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 2.5E-127 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.243 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 SUPERFAMILY SSF53244 299 437 8.24E-50 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Gene3D G3DSA:3.40.50.720 1 94 5.5E-14 T 29-03-2018 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Pfam PF08245 Mur ligase middle domain 110 280 7.6E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 SUPERFAMILY SSF53623 95 297 1.19E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04680 38c508ff4036c2a36007d26eccc510f3 438 Gene3D G3DSA:3.40.1190.10 95 299 4.2E-61 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS13410 86f3f1e1e257b15b1b60d8a8aa95cec2 488 Gene3D G3DSA:3.60.60.10 18 478 4.5E-43 T 29-03-2018 CPU03_RS13410 86f3f1e1e257b15b1b60d8a8aa95cec2 488 Pfam PF03577 Peptidase family C69 20 415 5.9E-143 T 29-03-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 CPU03_RS00705 793ad4dbd21ab7e2c25cbc2e9834a42d 181 Pfam PF14002 YniB-like protein 15 180 8.2E-77 T 29-03-2018 IPR025229 YniB-like protein CPU03_RS00705 793ad4dbd21ab7e2c25cbc2e9834a42d 181 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 153 6.0E-53 T 29-03-2018 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 Gene3D G3DSA:3.60.120.10 1 520 2.4E-157 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 PIRSF PIRSF001373 1 521 3.4E-237 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 SUPERFAMILY SSF56322 6 510 2.62E-159 T 29-03-2018 IPR005801 ADC synthase GO:0009058 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 190 1.5E-13 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 Pfam PF00425 chorismate binding enzyme 242 502 2.7E-85 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 514 3.2E-225 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.7E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.7E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.7E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00915 b6b94493e078432c2aaf327defaeb803 523 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.7E-23 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 Pfam PF03741 Integral membrane protein TerC family 14 202 3.1E-46 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 SMART SM01091 429 511 3.9E-19 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 Gene3D G3DSA:3.30.465.10 428 511 1.1E-18 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 Pfam PF00571 CBS domain 370 417 8.3E-4 T 29-03-2018 IPR000644 CBS domain CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 Pfam PF03471 Transporter associated domain 432 510 5.1E-17 T 29-03-2018 IPR005170 Transporter-associated domain CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 Gene3D G3DSA:3.10.580.10 279 427 2.0E-24 T 29-03-2018 CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 SUPERFAMILY SSF54631 288 425 4.93E-23 T 29-03-2018 CPU03_RS00780 99efe566562426966ea9c6dc9d26e3cc 520 SUPERFAMILY SSF56176 430 514 1.58E-16 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 Gene3D G3DSA:1.25.40.10 384 541 1.8E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 100 3.1E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 Gene3D G3DSA:1.10.10.10 1 105 1.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 SUPERFAMILY SSF46894 2 102 2.52E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 SMART SM00862 24 100 1.8E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS04100 9a25665c77106acd09a23b39733f09ac 547 SUPERFAMILY SSF48452 386 534 2.78E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS13395 70c09f44c65ca56b271337c0c4442704 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 1.2E-206 T 29-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CPU03_RS13395 70c09f44c65ca56b271337c0c4442704 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CPU03_RS13395 70c09f44c65ca56b271337c0c4442704 567 SUPERFAMILY SSF56762 1 552 4.19E-166 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13395 70c09f44c65ca56b271337c0c4442704 567 Gene3D G3DSA:1.10.645.10 1 552 1.9E-182 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13395 70c09f44c65ca56b271337c0c4442704 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 29-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 Gene3D G3DSA:3.90.1820.10 1 458 6.9E-97 T 29-03-2018 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 192 436 2.6E-39 T 29-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 Pfam PF02056 Family 4 glycosyl hydrolase 2 172 1.2E-26 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 SUPERFAMILY SSF51735 2 167 2.56E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 SUPERFAMILY SSF56327 166 451 3.89E-46 T 29-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 188 200 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 136 153 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS15205 81f5b977e4da1b23dfd15d001604903f 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 162 173 6.3E-18 T 29-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.04 T 29-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 Gene3D G3DSA:2.60.120.520 24 131 4.3E-48 T 29-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 Pfam PF04962 KduI/IolB family 37 273 9.3E-36 T 29-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 PIRSF PIRSF006625 1 278 3.2E-132 T 29-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 Gene3D G3DSA:2.60.120.10 132 278 4.8E-52 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS00600 10e3bfe3e7ea3e89a84a74680714e10b 278 SUPERFAMILY SSF51182 1 262 2.42E-104 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 Gene3D G3DSA:3.90.950.10 3 194 6.1E-54 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 Pfam PF02545 Maf-like protein 4 186 1.4E-42 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 185 5.2E-55 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 PIRSF PIRSF006305 1 192 1.7E-39 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.438 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 CPU03_RS14555 a5393dd78789ba9668835f4c316a8cc2 197 SUPERFAMILY SSF52972 2 185 5.1E-57 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 Pfam PF01207 Dihydrouridine synthase (Dus) 14 317 3.7E-116 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 PIRSF PIRSF006621 1 328 6.6E-102 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.2E-137 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 SUPERFAMILY SSF51395 10 319 2.75E-87 T 29-03-2018 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 Gene3D G3DSA:1.10.1200.80 252 329 2.4E-20 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 Gene3D G3DSA:3.20.20.70 7 241 5.3E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS09830 04abc1a4bf63a6e619e6a25b8cbe1bf8 334 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.644 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 Pfam PF00581 Rhodanese-like domain 171 257 2.1E-12 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 Pfam PF00581 Rhodanese-like domain 290 412 4.9E-11 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 Gene3D G3DSA:3.40.250.10 18 126 5.4E-9 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SMART SM00450 22 133 0.9 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SMART SM00450 288 416 1.9E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SMART SM00450 146 261 1.5E-14 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 Gene3D G3DSA:3.40.250.10 280 428 3.3E-23 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 ProSitePatterns PS00380 Rhodanese signature 1. 175 186 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SUPERFAMILY SSF52821 135 268 3.93E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SUPERFAMILY SSF52821 30 121 2.62E-9 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 Gene3D G3DSA:3.40.250.10 133 277 2.6E-26 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS13290 4559fb8e3ef0c14597ba2e548b048132 430 SUPERFAMILY SSF52821 284 421 4.06E-28 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS01395 a2c48ed84bab31f013ed79837f39c050 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 3.6E-133 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CPU03_RS01395 a2c48ed84bab31f013ed79837f39c050 320 PIRSF PIRSF026649 10 315 1.8E-97 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS01395 a2c48ed84bab31f013ed79837f39c050 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 306 1.5E-93 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CPU03_RS01395 a2c48ed84bab31f013ed79837f39c050 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 54.277 T 29-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 SUPERFAMILY SSF89963 2 89 1.39E-30 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.1E-66 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 SUPERFAMILY SSF89963 92 163 8.11E-30 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.313 T 29-03-2018 IPR007551 Protein of unknown function DUF520 CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 Gene3D G3DSA:3.30.70.990 10 97 5.7E-31 T 29-03-2018 IPR035570 UPF0234 N-terminal domain CPU03_RS03375 9245f1b107ce3596b12db84f24d4a293 163 Gene3D G3DSA:3.30.70.860 98 162 3.2E-34 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CPU03_RS00800 5d230246420e96f56cef0b3fe9298167 287 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 15 285 3.6E-141 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CPU03_RS00800 5d230246420e96f56cef0b3fe9298167 287 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 17 285 1.8E-110 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 SUPERFAMILY SSF52440 3 140 1.15E-34 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Gene3D G3DSA:3.40.50.20 1 151 3.3E-40 T 29-03-2018 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 PIRSF PIRSF039102 1 360 1.3E-128 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Gene3D G3DSA:3.30.470.20 214 361 1.5E-42 T 29-03-2018 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 352 41.55 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 108 119 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Pfam PF01820 D-ala D-ala ligase N-terminus 5 131 6.7E-29 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 294 322 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Pfam PF07478 D-ala D-ala ligase C-terminus 148 349 6.9E-77 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 SUPERFAMILY SSF56059 141 354 1.77E-59 T 29-03-2018 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 351 1.7E-111 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CPU03_RS08750 8adff349d1acc72bde15b30028618f20 368 Gene3D G3DSA:3.30.1490.20 156 213 3.5E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 Pfam PF13091 PLD-like domain 250 394 3.1E-15 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 Pfam PF13091 PLD-like domain 55 187 8.1E-22 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 Gene3D G3DSA:3.30.870.10 227 414 2.4E-29 T 29-03-2018 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 Gene3D G3DSA:3.30.870.10 34 226 2.0E-32 T 29-03-2018 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 SUPERFAMILY SSF56024 48 191 1.33E-30 T 29-03-2018 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 SUPERFAMILY SSF56024 232 403 1.18E-26 T 29-03-2018 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 SMART SM00155 339 366 0.074 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS12975 d0e94bf188f09175709b60cf6072460e 414 SMART SM00155 132 159 6.2E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CPU03_RS04895 9703dffb6c7f530889ba5d4f29f4eef2 153 SUPERFAMILY SSF54534 8 139 1.65E-31 T 29-03-2018 CPU03_RS04895 9703dffb6c7f530889ba5d4f29f4eef2 153 Gene3D G3DSA:3.10.50.40 4 152 1.2E-16 T 29-03-2018 CPU03_RS04895 9703dffb6c7f530889ba5d4f29f4eef2 153 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 83 2.2E-9 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 Pfam PF13353 4Fe-4S single cluster domain 12 154 1.2E-11 T 29-03-2018 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 289 1.7E-102 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 PIRSF PIRSF000371 1 299 4.6E-96 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 SUPERFAMILY SSF102114 98 264 1.71E-16 T 29-03-2018 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 Pfam PF04055 Radical SAM superfamily 19 238 2.3E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS05795 68b0d0df2fed570c4b30bd0ad7e13486 299 Gene3D G3DSA:3.80.30.10 121 299 2.7E-31 T 29-03-2018 CPU03_RS00690 692ef91e6e1a43e40d93f408e27cf989 218 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 73 101 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS00690 692ef91e6e1a43e40d93f408e27cf989 218 Pfam PF01464 Transglycosylase SLT domain 55 181 4.6E-30 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS00690 692ef91e6e1a43e40d93f408e27cf989 218 Gene3D G3DSA:1.10.530.10 42 218 9.3E-30 T 29-03-2018 CPU03_RS00690 692ef91e6e1a43e40d93f408e27cf989 218 SUPERFAMILY SSF53955 51 215 2.62E-29 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS09740 0aa0770e82d22b782f2d1e651f0e4dd9 272 Gene3D G3DSA:3.40.1190.10 17 140 1.4E-4 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS09740 0aa0770e82d22b782f2d1e651f0e4dd9 272 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 25 248 3.6E-70 T 29-03-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CPU03_RS07305 01a8e2e8d616ee5aef8ee98a54d65621 176 SUPERFAMILY SSF52540 5 172 1.95E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07305 01a8e2e8d616ee5aef8ee98a54d65621 176 Pfam PF01202 Shikimate kinase 17 170 2.7E-11 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CPU03_RS07305 01a8e2e8d616ee5aef8ee98a54d65621 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 171 2.8E-66 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CPU03_RS07305 01a8e2e8d616ee5aef8ee98a54d65621 176 Gene3D G3DSA:3.40.50.300 7 175 2.1E-27 T 29-03-2018 CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 259 5.6E-121 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 Gene3D G3DSA:3.40.50.300 9 257 2.0E-63 T 29-03-2018 CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 Pfam PF00005 ABC transporter 28 183 3.9E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 SUPERFAMILY SSF52540 12 245 2.84E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08140 7376c1198a52f9f32148b2224d7ab2e6 259 SMART SM00382 37 231 2.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11350 b287f6e8676640cbd88be68b3cdab292 349 SMART SM00530 18 79 6.4E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS11350 b287f6e8676640cbd88be68b3cdab292 349 Pfam PF13464 Domain of unknown function (DUF4115) 267 341 1.8E-23 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 CPU03_RS11350 b287f6e8676640cbd88be68b3cdab292 349 Pfam PF13413 Helix-turn-helix domain 18 79 2.5E-14 T 29-03-2018 CPU03_RS11350 b287f6e8676640cbd88be68b3cdab292 349 Gene3D G3DSA:1.10.260.40 8 90 4.8E-12 T 29-03-2018 CPU03_RS11350 b287f6e8676640cbd88be68b3cdab292 349 SUPERFAMILY SSF47413 12 52 9.38E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 SMART SM00876 223 315 4.0E-48 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 PIRSF PIRSF001619 2 322 7.4E-136 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 Pfam PF04055 Radical SAM superfamily 53 208 1.9E-13 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 223 313 2.9E-19 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 Hamap MF_01694 Biotin synthase [bioB]. 8 316 41.371 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 SMART SM00729 46 258 3.8E-38 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 TIGRFAM TIGR00433 bioB: biotin synthase 17 313 5.1E-123 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 Gene3D G3DSA:3.20.20.70 7 318 3.4E-59 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12715 4f41a5b87276f941895cad612630758c 348 SUPERFAMILY SSF102114 8 316 1.44E-92 T 29-03-2018 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 Gene3D G3DSA:3.20.70.20 4 761 2.8E-277 T 29-03-2018 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 Pfam PF02901 Pyruvate formate lyase-like 25 616 4.1E-192 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 13 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 ProSitePatterns PS00850 Glycine radical domain signature. 732 740 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 Pfam PF01228 Glycine radical 632 743 1.3E-41 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 SUPERFAMILY SSF51998 11 760 5.04E-278 T 29-03-2018 CPU03_RS03740 b1124ca48dd0bb931ae9c454a2743bc7 762 PIRSF PIRSF000379 10 761 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 Pfam PF13437 HlyD family secretion protein 198 278 9.5E-11 T 29-03-2018 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 Gene3D G3DSA:1.20.1600.10 21 169 2.0E-16 T 29-03-2018 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 Gene3D G3DSA:1.20.1600.10 170 326 9.1E-14 T 29-03-2018 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 Pfam PF13533 Biotin-lipoyl like 43 90 1.3E-17 T 29-03-2018 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 SUPERFAMILY SSF111369 40 119 2.75E-13 T 29-03-2018 CPU03_RS12995 bd87a01fced76fbc9fa68339c2effac6 329 SUPERFAMILY SSF111369 172 277 9.55E-9 T 29-03-2018 CPU03_RS00235 1de37fb0a7ea75568f5f78ab1fd51dcb 179 Gene3D G3DSA:1.10.530.40 1 177 1.5E-43 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 CPU03_RS00235 1de37fb0a7ea75568f5f78ab1fd51dcb 179 SUPERFAMILY SSF53955 9 175 3.53E-34 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS00235 1de37fb0a7ea75568f5f78ab1fd51dcb 179 Pfam PF00959 Phage lysozyme 49 165 1.2E-23 T 29-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CPU03_RS05855 2a01dda0df52e992e6455f066a469ea9 174 Pfam PF10688 Bacterial inner membrane protein 7 164 9.0E-56 T 29-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CPU03_RS05855 2a01dda0df52e992e6455f066a469ea9 174 PIRSF PIRSF011443 2 174 6.4E-65 T 29-03-2018 IPR026267 Inner membrane protein YgjV CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 SMART SM00271 1 66 6.1E-5 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 1.8E-16 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 SUPERFAMILY SSF47144 77 170 3.53E-24 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 Gene3D G3DSA:1.20.1280.20 81 171 3.9E-24 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 3.0E-48 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 SUPERFAMILY SSF46565 1 75 9.55E-17 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.304 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CPU03_RS11305 5b14e53164a52d5a29e1158e1da681ad 172 Gene3D G3DSA:1.10.287.110 1 79 1.3E-8 T 29-03-2018 IPR001623 DnaJ domain CPU03_RS03855 050d67cea35963e345f12577a6e2ab53 183 Pfam PF10554 Ash protein family 22 131 7.7E-29 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 29-03-2018 CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 5.3E-68 T 29-03-2018 IPR000150 Cof family GO:0016787 CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 6.4E-28 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 3.2E-63 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 Gene3D G3DSA:3.40.50.1000 1 272 6.4E-47 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08225 04278771a9c79c850f7b970b7a6aaca8 272 SUPERFAMILY SSF56784 1 269 4.14E-72 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS06535 bf349c1cf7a749a559a285bc8c7944bf 434 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 29 430 1.1E-141 T 29-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CPU03_RS06535 bf349c1cf7a749a559a285bc8c7944bf 434 Gene3D G3DSA:1.20.1250.20 247 431 7.6E-10 T 29-03-2018 CPU03_RS06535 bf349c1cf7a749a559a285bc8c7944bf 434 SUPERFAMILY SSF103473 23 422 1.57E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS06535 bf349c1cf7a749a559a285bc8c7944bf 434 Pfam PF07690 Major Facilitator Superfamily 35 379 4.8E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS06535 bf349c1cf7a749a559a285bc8c7944bf 434 Gene3D G3DSA:1.20.1250.20 23 246 9.8E-14 T 29-03-2018 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 1.6E-73 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 Pfam PF01416 tRNA pseudouridine synthase 153 253 5.6E-27 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 Pfam PF01416 tRNA pseudouridine synthase 17 111 6.7E-11 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 PIRSF PIRSF001430 9 260 4.5E-76 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 Gene3D G3DSA:3.30.70.580 8 113 3.1E-35 T 29-03-2018 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 34.5 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 SUPERFAMILY SSF55120 9 265 5.75E-90 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS13160 4c6d9503715ded22f3730596c01ebfbe 270 Gene3D G3DSA:3.30.70.660 114 251 5.4E-35 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 Gene3D G3DSA:3.50.14.10 7 185 5.3E-55 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 306 6.3E-124 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 SUPERFAMILY SSF56596 6 305 4.45E-95 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 Gene3D G3DSA:3.30.54.10 266 306 4.1E-7 T 29-03-2018 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 Gene3D G3DSA:3.30.54.10 186 246 2.8E-25 T 29-03-2018 CPU03_RS16390 a265ccd1f3f936781765c43eb2d53147 312 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 304 5.9E-125 T 29-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 Gene3D G3DSA:3.40.1280.10 1 169 5.8E-74 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 1.1E-110 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 Gene3D G3DSA:1.10.1270.20 170 252 3.4E-35 T 29-03-2018 CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 SUPERFAMILY SSF75217 1 246 5.1E-103 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 PIRSF PIRSF000386 1 251 6.0E-103 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.1E-70 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CPU03_RS11115 fa4815bc67387e61a362a997db5c915d 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 121.138 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 PIRSF PIRSF001563 7 419 9.4E-107 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 Gene3D G3DSA:3.90.190.20 288 422 3.8E-30 T 29-03-2018 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 Pfam PF08245 Mur ligase middle domain 54 200 4.6E-12 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 8.9E-103 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 29-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 Gene3D G3DSA:3.40.1190.10 5 287 2.0E-78 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 SUPERFAMILY SSF53623 15 284 4.06E-84 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 SUPERFAMILY SSF53244 286 415 9.62E-34 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS13175 d56079fe6a68494b1e3b127da83db6fd 423 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 337 2.3E-5 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS11935 ddae06a67b7504ee2146f131e86a167a 337 Gene3D G3DSA:1.10.10.60 283 337 3.8E-6 T 29-03-2018 CPU03_RS11935 ddae06a67b7504ee2146f131e86a167a 337 SMART SM00342 249 332 1.2E-4 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11935 ddae06a67b7504ee2146f131e86a167a 337 Pfam PF12833 Helix-turn-helix domain 256 330 5.1E-10 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11935 ddae06a67b7504ee2146f131e86a167a 337 Gene3D G3DSA:1.10.10.60 227 282 0.0011 T 29-03-2018 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 SUPERFAMILY SSF53822 90 356 1.49E-40 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Gene3D G3DSA:3.40.50.2300 185 358 8.9E-35 T 29-03-2018 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Gene3D G3DSA:3.40.50.2300 85 184 6.5E-11 T 29-03-2018 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Gene3D G3DSA:1.10.10.10 10 34 3.2E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 SMART SM00354 22 90 1.1E-4 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Pfam PF00356 Bacterial regulatory proteins, lacI family 25 65 3.6E-9 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Gene3D G3DSA:1.10.260.40 35 84 5.1E-14 T 29-03-2018 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 Pfam PF13377 Periplasmic binding protein-like domain 191 355 2.0E-27 T 29-03-2018 CPU03_RS10260 2be9a3981a136873db9b240c79c30db6 374 SUPERFAMILY SSF47413 21 75 2.39E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS15130 112087177126140c290c8c76f4cd2792 394 SUPERFAMILY SSF103473 5 382 1.19E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS15130 112087177126140c290c8c76f4cd2792 394 Gene3D G3DSA:1.20.1250.20 211 387 6.0E-14 T 29-03-2018 CPU03_RS15130 112087177126140c290c8c76f4cd2792 394 Pfam PF07690 Major Facilitator Superfamily 9 247 9.5E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15130 112087177126140c290c8c76f4cd2792 394 Gene3D G3DSA:1.20.1250.20 2 202 3.4E-22 T 29-03-2018 CPU03_RS05945 209ec55cf5aac2b2f0408617f99fb777 127 Gene3D G3DSA:3.40.1440.10 4 89 5.1E-6 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS05945 209ec55cf5aac2b2f0408617f99fb777 127 SUPERFAMILY SSF82771 8 79 4.05E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS05945 209ec55cf5aac2b2f0408617f99fb777 127 Pfam PF01541 GIY-YIG catalytic domain 10 81 6.9E-14 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily CPU03_RS05945 209ec55cf5aac2b2f0408617f99fb777 127 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 7 99 29.199 T 29-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CPU03_RS16695 036f40e750a3a7c8d69262bbd3d4164a 273 Gene3D G3DSA:3.40.50.300 19 269 2.4E-5 T 29-03-2018 CPU03_RS16695 036f40e750a3a7c8d69262bbd3d4164a 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 71.588 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CPU03_RS16695 036f40e750a3a7c8d69262bbd3d4164a 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 4.6E-73 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CPU03_RS00885 9c086a41bf1e9a0f9c793f8866fe56a1 371 Pfam PF03600 Citrate transporter 21 313 3.8E-23 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 PIRSF PIRSF014774 1 316 5.2E-176 T 29-03-2018 IPR025539 YdgH protein CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 SUPERFAMILY SSF159871 3 94 2.88E-24 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 SUPERFAMILY SSF159871 104 179 4.58E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Gene3D G3DSA:3.30.1660.10 22 90 3.8E-21 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 SUPERFAMILY SSF159871 238 316 3.01E-17 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Gene3D G3DSA:3.30.1660.10 107 175 1.6E-17 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Gene3D G3DSA:3.30.1660.10 248 316 1.5E-21 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 2.8E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Pfam PF07338 Protein of unknown function (DUF1471) 260 316 1.2E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS16545 5c610940c6fa6c87102f2df03450370c 316 Pfam PF07338 Protein of unknown function (DUF1471) 119 175 9.2E-19 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 Gene3D G3DSA:1.10.40.30 391 445 4.5E-30 T 29-03-2018 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.7E-17 T 29-03-2018 IPR000362 Fumarate lyase family CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 Gene3D G3DSA:1.20.200.10 118 390 8.1E-83 T 29-03-2018 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.6E-147 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 SUPERFAMILY SSF48557 4 447 4.08E-105 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 Pfam PF00206 Lyase 14 312 3.7E-72 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 Gene3D G3DSA:1.10.275.10 1 117 9.8E-44 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal CPU03_RS14775 bac7c8677e2649560cb903503885ad8c 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 5.0E-51 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 453 3.1E-57 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 Gene3D G3DSA:3.40.50.450 124 452 3.5E-97 T 29-03-2018 CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 Pfam PF03641 Possible lysine decarboxylase 190 329 3.5E-31 T 29-03-2018 IPR031100 LOG family CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 Gene3D G3DSA:3.30.1850.10 3 111 1.6E-47 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 SUPERFAMILY SSF102405 120 329 8.55E-40 T 29-03-2018 CPU03_RS04240 76c56120fbad95539f5d0087447e5296 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 3.3E-46 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.655 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.9E-50 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.7E-64 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.7E-171 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 SUPERFAMILY SSF52096 5 318 1.05E-107 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS04110 7c054d0571752c511e22dfeae432de5d 319 Gene3D G3DSA:3.90.226.10 34 315 2.2E-70 T 29-03-2018 CPU03_RS15210 01685d80f9436222ac93c9bfd077f37e 254 Gene3D G3DSA:3.40.50.10490 99 211 5.5E-12 T 29-03-2018 CPU03_RS15210 01685d80f9436222ac93c9bfd077f37e 254 SUPERFAMILY SSF53697 101 229 9.57E-15 T 29-03-2018 CPU03_RS15210 01685d80f9436222ac93c9bfd077f37e 254 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 65 7.6E-10 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CPU03_RS15210 01685d80f9436222ac93c9bfd077f37e 254 SUPERFAMILY SSF46689 11 71 1.4E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS15210 01685d80f9436222ac93c9bfd077f37e 254 Gene3D G3DSA:1.10.10.10 4 98 8.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02795 6f51651ab1dc43ac7ab06910f01eb165 206 PIRSF PIRSF000013 7 206 7.2E-106 T 29-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CPU03_RS02795 6f51651ab1dc43ac7ab06910f01eb165 206 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 28 199 3.5E-78 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CPU03_RS02795 6f51651ab1dc43ac7ab06910f01eb165 206 SUPERFAMILY SSF48695 23 201 7.96E-65 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS02795 6f51651ab1dc43ac7ab06910f01eb165 206 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 17 200 3.9E-105 T 29-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CPU03_RS02795 6f51651ab1dc43ac7ab06910f01eb165 206 Gene3D G3DSA:1.10.468.10 69 203 1.2E-29 T 29-03-2018 CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 Gene3D G3DSA:1.20.1250.20 265 492 3.3E-17 T 29-03-2018 CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 Gene3D G3DSA:1.20.1250.20 16 194 5.1E-17 T 29-03-2018 CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 14 483 1.6E-66 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 SUPERFAMILY SSF103473 19 192 6.15E-15 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 SUPERFAMILY SSF103473 266 477 2.62E-13 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01550 a8140dc8505729160b095583c6cdfecc 499 Pfam PF00854 POT family 104 441 2.6E-29 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CPU03_RS14985 170d097db6a097553cd443555e723039 268 SUPERFAMILY SSF53335 11 152 5.68E-19 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS14985 170d097db6a097553cd443555e723039 268 Gene3D G3DSA:3.40.50.150 9 153 5.5E-17 T 29-03-2018 CPU03_RS14985 170d097db6a097553cd443555e723039 268 Pfam PF13649 Methyltransferase domain 65 133 4.9E-10 T 29-03-2018 CPU03_RS05960 0c50127c80855a6132b392e85fc92d30 173 SUPERFAMILY SSF55718 36 136 1.47E-24 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS05960 0c50127c80855a6132b392e85fc92d30 173 PIRSF PIRSF025550 1 173 1.2E-76 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CPU03_RS05960 0c50127c80855a6132b392e85fc92d30 173 Pfam PF02036 SCP-2 sterol transfer family 42 133 2.1E-20 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS05960 0c50127c80855a6132b392e85fc92d30 173 Gene3D G3DSA:3.30.1050.10 24 140 2.0E-19 T 29-03-2018 IPR003033 SCP2 sterol-binding domain CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 SUPERFAMILY SSF47226 797 894 2.36E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Gene3D G3DSA:1.10.287.130 439 506 2.9E-6 T 29-03-2018 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Gene3D G3DSA:1.20.120.160 771 895 2.5E-15 T 29-03-2018 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Pfam PF16359 RcsD-ABL domain 680 784 4.9E-29 T 29-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 SUPERFAMILY SSF47384 433 511 7.65E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 667 2.8E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Pfam PF01627 Hpt domain 815 890 3.2E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Gene3D G3DSA:3.30.565.10 515 682 1.2E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 895 23.682 T 29-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 SMART SM00387 558 671 3.5E-5 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS13545 9cbdffe805d4f43d59daa4b276c49172 903 SUPERFAMILY SSF55874 501 667 3.68E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS01115 2ee8987a83639d8bdc95eec7216ff86c 112 Pfam PF07383 Protein of unknown function (DUF1496) 64 110 1.0E-19 T 29-03-2018 IPR009971 Protein of unknown function DUF1496 CPU03_RS08235 20a13dbc0c068a1cb055539b8363ae90 114 Pfam PF07119 Protein of unknown function (DUF1375) 17 79 2.6E-15 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CPU03_RS11135 b3fedcc4afcdde54787a23f6f72aae10 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 1.4E-149 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS11135 b3fedcc4afcdde54787a23f6f72aae10 447 PIRSF PIRSF004539 1 447 2.8E-185 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS11135 b3fedcc4afcdde54787a23f6f72aae10 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 8.0E-158 T 29-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 Pfam PF13365 Trypsin-like peptidase domain 79 213 4.8E-30 T 29-03-2018 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 SUPERFAMILY SSF50156 238 345 5.65E-23 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 Gene3D G3DSA:2.40.10.10 42 149 9.7E-31 T 29-03-2018 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 Pfam PF13180 PDZ domain 277 345 7.3E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 SUPERFAMILY SSF50494 44 252 9.69E-59 T 29-03-2018 IPR009003 Peptidase S1, PA clan CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 SMART SM00228 255 337 6.4E-13 T 29-03-2018 IPR001478 PDZ domain GO:0005515 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 Gene3D G3DSA:2.40.10.10 150 256 1.5E-29 T 29-03-2018 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 1.2E-155 T 29-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 Gene3D G3DSA:2.30.42.10 257 353 1.1E-21 T 29-03-2018 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 88 100 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 295 307 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 109 129 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 149 173 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS05290 2fe3519a1969c181734ef59eb0561c7a 353 PRINTS PR00834 HtrA/DegQ protease family signature 184 201 3.7E-49 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CPU03_RS10155 fb7f53d56ece9bb7a510a63a7c62c963 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 9.0E-23 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS10155 fb7f53d56ece9bb7a510a63a7c62c963 102 SUPERFAMILY SSF52794 2 101 6.28E-33 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS10155 fb7f53d56ece9bb7a510a63a7c62c963 102 Gene3D G3DSA:3.40.50.2300 3 102 8.5E-37 T 29-03-2018 CPU03_RS03260 e06fdf8168ecb75f1308ae680ea99bc6 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 1.0E-54 T 29-03-2018 IPR019693 Biofilm formation regulator YbaJ CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 SUPERFAMILY SSF50249 3 70 3.77E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 PRINTS PR00050 Cold shock protein signature 43 61 9.5E-19 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 PRINTS PR00050 Cold shock protein signature 7 22 9.5E-19 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 PRINTS PR00050 Cold shock protein signature 28 37 9.5E-19 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.0E-33 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 Gene3D G3DSA:2.40.50.140 4 70 7.5E-30 T 29-03-2018 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 PIRSF PIRSF002599 1 71 6.4E-26 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS12980 699b40692f0291e839e115b38499e24d 71 SMART SM00357 6 70 3.7E-32 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS05370 d0442daab42cc7ee7511b3bf07c4d9f6 154 SUPERFAMILY SSF55804 8 154 1.57E-41 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS05370 d0442daab42cc7ee7511b3bf07c4d9f6 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 153 2.6E-37 T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS05370 d0442daab42cc7ee7511b3bf07c4d9f6 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain CPU03_RS05370 d0442daab42cc7ee7511b3bf07c4d9f6 154 Gene3D G3DSA:3.40.930.10 8 154 3.3E-38 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CPU03_RS05370 d0442daab42cc7ee7511b3bf07c4d9f6 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 154 3.8E-60 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CPU03_RS15720 9996e46782b81353d874fa24799f4b88 477 PIRSF PIRSF002457 1 474 2.2E-145 T 29-03-2018 IPR030676 Citrate carrier CitT-related CPU03_RS15720 9996e46782b81353d874fa24799f4b88 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 1.6E-162 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS15720 9996e46782b81353d874fa24799f4b88 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 474 1.3E-177 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 419 2.4E-146 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 PIRSF PIRSF000505 2 427 3.9E-151 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 SUPERFAMILY SSF55205 5 424 8.63E-140 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 Gene3D G3DSA:3.65.10.10 22 234 1.5E-62 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 6.6E-141 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 34.396 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CPU03_RS14245 7519ea8764d5e166ca211e3539b68a0e 429 Gene3D G3DSA:3.65.10.10 235 426 2.8E-67 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CPU03_RS03210 286eb3616811d166deb4ad9b61e1a316 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 37.408 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CPU03_RS03210 286eb3616811d166deb4ad9b61e1a316 183 SUPERFAMILY SSF53271 12 180 1.08E-48 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS03210 286eb3616811d166deb4ad9b61e1a316 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 3.0E-70 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CPU03_RS03210 286eb3616811d166deb4ad9b61e1a316 183 Pfam PF00156 Phosphoribosyl transferase domain 31 165 1.1E-13 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS03210 286eb3616811d166deb4ad9b61e1a316 183 Gene3D G3DSA:3.40.50.2020 4 182 1.5E-39 T 29-03-2018 CPU03_RS03130 99c281dd5e4db9bfb0a617543a7ed890 270 Pfam PF01963 TraB family 35 265 7.2E-35 T 29-03-2018 IPR002816 Pheromone shutdown, TraB CPU03_RS12000 15071ee397a599c57120f3b1b00f3007 211 SMART SM00470 49 148 0.0047 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS12000 15071ee397a599c57120f3b1b00f3007 211 SUPERFAMILY SSF110849 47 180 1.34E-16 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS12000 15071ee397a599c57120f3b1b00f3007 211 Gene3D G3DSA:3.90.1530.10 41 152 4.8E-10 T 29-03-2018 CPU03_RS12000 15071ee397a599c57120f3b1b00f3007 211 Pfam PF02195 ParB-like nuclease domain 50 108 3.3E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS13550 84651658a1b0b8b060c2cdde3c53d334 370 Gene3D G3DSA:3.40.1710.10 38 190 1.3E-24 T 29-03-2018 CPU03_RS13550 84651658a1b0b8b060c2cdde3c53d334 370 Pfam PF12698 ABC-2 family transporter protein 24 361 4.2E-47 T 29-03-2018 CPU03_RS13550 84651658a1b0b8b060c2cdde3c53d334 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 292 311 2.5E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS13550 84651658a1b0b8b060c2cdde3c53d334 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 255 279 2.5E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS13550 84651658a1b0b8b060c2cdde3c53d334 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 312 331 2.5E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CPU03_RS07925 b8d2d026a5643ea174f4ac1455e155ba 207 Gene3D G3DSA:3.40.30.10 17 206 5.7E-35 T 29-03-2018 CPU03_RS07925 b8d2d026a5643ea174f4ac1455e155ba 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CPU03_RS07925 b8d2d026a5643ea174f4ac1455e155ba 207 Pfam PF01323 DSBA-like thioredoxin domain 40 180 2.4E-27 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CPU03_RS07925 b8d2d026a5643ea174f4ac1455e155ba 207 SUPERFAMILY SSF52833 21 201 2.61E-43 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS07925 b8d2d026a5643ea174f4ac1455e155ba 207 PIRSF PIRSF001488 1 207 3.5E-82 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 SUPERFAMILY SSF53448 12 231 8.67E-62 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 231 1.7E-75 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 232 2.3E-84 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 11 231 43.838 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 Gene3D G3DSA:3.90.550.10 6 238 2.1E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS10940 e00ee61baacb3fa8aa96c5a3a1645c12 239 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CPU03_RS09105 9ea9aa50f711ec9cce4dfabdd4d286f4 226 SUPERFAMILY SSF53271 44 224 1.44E-37 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS09105 9ea9aa50f711ec9cce4dfabdd4d286f4 226 Gene3D G3DSA:3.40.50.2020 60 226 3.5E-29 T 29-03-2018 CPU03_RS09105 9ea9aa50f711ec9cce4dfabdd4d286f4 226 Pfam PF00156 Phosphoribosyl transferase domain 182 223 5.8E-9 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS16400 aee23c6bbcdbc77d39fbbab916d23e4d 411 SUPERFAMILY SSF103473 23 403 7.46E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16400 aee23c6bbcdbc77d39fbbab916d23e4d 411 Gene3D G3DSA:1.20.1250.20 18 217 2.3E-34 T 29-03-2018 CPU03_RS16400 aee23c6bbcdbc77d39fbbab916d23e4d 411 Pfam PF07690 Major Facilitator Superfamily 32 260 2.7E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS16400 aee23c6bbcdbc77d39fbbab916d23e4d 411 Gene3D G3DSA:1.20.1250.20 220 404 1.0E-15 T 29-03-2018 CPU03_RS16400 aee23c6bbcdbc77d39fbbab916d23e4d 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PIRSF PIRSF036388 2 432 2.7E-218 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 SUPERFAMILY SSF53187 106 428 1.26E-103 T 29-03-2018 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 Gene3D G3DSA:3.40.630.10 95 432 1.2E-114 T 29-03-2018 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 1.3E-105 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 Pfam PF12404 Peptidase 6 82 2.7E-29 T 29-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 5.2E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 5.2E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 5.2E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 5.2E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS11325 aab45f3e50291299bfb75182c2be04d5 433 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 5.2E-44 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PIRSF PIRSF001174 11 792 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Gene3D G3DSA:2.30.130.40 11 135 2.9E-31 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Gene3D G3DSA:3.30.230.10 602 789 6.2E-70 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 27 218 8.0E-43 T 29-03-2018 IPR003111 Lon, substrate-binding domain CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 612 628 4.6E-57 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 739 4.6E-57 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 373 392 4.6E-57 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 743 761 4.6E-57 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 690 709 4.6E-57 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 SMART SM00464 27 219 2.0E-83 T 29-03-2018 IPR003111 Lon, substrate-binding domain CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 SUPERFAMILY SSF54211 612 787 1.21E-58 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 693 701 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Hamap MF_01973 Lon protease [lon]. 28 789 71.94 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 SUPERFAMILY SSF88697 27 218 4.72E-52 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Gene3D G3DSA:3.40.50.300 330 507 2.1E-30 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Gene3D G3DSA:1.10.4060.10 137 228 1.1E-30 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 TIGRFAM TIGR00763 lon: endopeptidase La 29 788 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Gene3D G3DSA:1.10.8.60 508 601 9.5E-33 T 29-03-2018 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 SUPERFAMILY SSF52540 330 604 1.32E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 587 789 3.1E-98 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 SMART SM00382 365 509 3.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS03335 960e5fcf1596f1c0270f9e3ed978a1da 801 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 369 506 6.1E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.8E-36 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 Gene3D G3DSA:3.40.50.1370 147 292 1.2E-47 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 SUPERFAMILY SSF53671 4 306 1.17E-100 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 Gene3D G3DSA:3.40.50.1370 1 146 1.6E-51 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.1E-47 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.8E-117 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.914 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS09945 33bce3123d566b4e5abc06ccf7bce69d 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.3E-29 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 1 92 8.9E-8 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 449 520 6.5E-17 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 103 171 6.9E-10 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 361 434 2.0E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Pfam PF00575 S1 RNA binding domain 20 86 1.4E-6 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 1 112 3.52E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 255 371 1.72E-31 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-239 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 5.5E-99 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 95 177 1.5E-7 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 429 538 1.94E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 104 185 4.33E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 189 277 3.88E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SUPERFAMILY SSF50249 362 444 1.4E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 451 550 1.7E-19 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 449 520 4.3E-22 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 190 260 2.8E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 362 434 2.6E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 19 87 4.5E-4 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 275 347 2.2E-27 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 SMART SM00316 103 171 8.1E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 361 435 1.9E-20 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 29-03-2018 CPU03_RS14255 1df34e00e82882ff632d43a38e834487 556 PIRSF PIRSF002111 1 534 6.6E-221 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CPU03_RS08370 0d94c343a6e448eefc107cee0d0c50a5 145 SMART SM00450 42 140 6.1E-20 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS08370 0d94c343a6e448eefc107cee0d0c50a5 145 Gene3D G3DSA:3.40.250.10 26 145 3.0E-25 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS08370 0d94c343a6e448eefc107cee0d0c50a5 145 Pfam PF00581 Rhodanese-like domain 45 136 2.1E-16 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS08370 0d94c343a6e448eefc107cee0d0c50a5 145 SUPERFAMILY SSF52821 18 144 1.18E-30 T 29-03-2018 IPR001763 Rhodanese-like domain CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 SUPERFAMILY SSF54211 135 278 2.58E-53 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 Gene3D G3DSA:3.30.1700.10 129 299 9.4E-70 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.902 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.1E-107 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 SUPERFAMILY SSF54211 3 124 6.37E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 8.3E-157 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS04640 3b79daee7219ff09bfb2b8b0887a7a7e 305 Gene3D G3DSA:3.30.230.20 1 128 6.3E-48 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 1.0E-118 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 Gene3D G3DSA:1.20.1090.10 173 361 1.6E-67 T 29-03-2018 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 42.744 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 SUPERFAMILY SSF56796 4 356 1.7E-117 T 29-03-2018 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 Gene3D G3DSA:3.40.50.1970 4 172 1.0E-50 T 29-03-2018 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 Pfam PF01761 3-dehydroquinate synthase 67 325 6.9E-109 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CPU03_RS09235 7bd5a3f3ce30fd29afc914de8f20dc1f 361 PIRSF PIRSF001455 9 360 2.5E-106 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 Gene3D G3DSA:3.40.50.1000 76 218 3.8E-18 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 SUPERFAMILY SSF56784 4 212 9.01E-46 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 Gene3D G3DSA:3.40.50.1000 1 28 0.2 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 3.2E-20 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 Gene3D G3DSA:1.10.150.240 29 75 1.6E-16 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS08150 0e0a82c7b78be0b7e4ce2b5bc49779c7 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 182 6.8E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS10445 d390845070faf565a9cf5a3b8f82a9d8 328 Gene3D G3DSA:3.40.190.10 152 221 6.5E-6 T 29-03-2018 CPU03_RS10445 d390845070faf565a9cf5a3b8f82a9d8 328 PIRSF PIRSF006470 1 328 1.0E-87 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CPU03_RS10445 d390845070faf565a9cf5a3b8f82a9d8 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 7.4E-80 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CPU03_RS10445 d390845070faf565a9cf5a3b8f82a9d8 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 280 3.1E-82 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CPU03_RS10445 d390845070faf565a9cf5a3b8f82a9d8 328 SUPERFAMILY SSF53850 152 269 1.94E-6 T 29-03-2018 CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 Pfam PF01145 SPFH domain / Band 7 family 22 241 8.7E-35 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 SMART SM00244 18 225 2.7E-43 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 PIRSF PIRSF005651 1 332 2.8E-107 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 SUPERFAMILY SSF117892 56 158 6.93E-18 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 TIGRFAM TIGR01932 hflC: HflC protein 1 325 4.7E-142 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 Gene3D G3DSA:3.40.50.300 62 326 0.0018 T 29-03-2018 CPU03_RS06280 607d4057ddb61f29e4849c18cf19c9d5 333 SUPERFAMILY SSF117892 194 231 6.41E-8 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS12990 0b359618764032f0070b714d418e1133 554 Pfam PF04632 Fusaric acid resistance protein family 8 175 5.4E-23 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CPU03_RS12990 0b359618764032f0070b714d418e1133 554 Pfam PF04632 Fusaric acid resistance protein family 223 532 1.5E-11 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CPU03_RS11240 67e8d5a797ffecd415fd971d3058c7d8 240 Pfam PF08241 Methyltransferase domain 72 125 1.3E-7 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CPU03_RS11240 67e8d5a797ffecd415fd971d3058c7d8 240 SUPERFAMILY SSF53335 77 207 1.48E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11240 67e8d5a797ffecd415fd971d3058c7d8 240 Gene3D G3DSA:3.40.50.150 51 210 3.3E-15 T 29-03-2018 CPU03_RS08530 1bf0280dff291eb3f1684fa1a9f53e5d 106 Pfam PF01340 Met Apo-repressor, MetJ 4 100 2.7E-59 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CPU03_RS08530 1bf0280dff291eb3f1684fa1a9f53e5d 106 Hamap MF_00744 Met repressor [metJ]. 2 106 40.108 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CPU03_RS08530 1bf0280dff291eb3f1684fa1a9f53e5d 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 102 4.0E-39 T 29-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CPU03_RS08530 1bf0280dff291eb3f1684fa1a9f53e5d 106 Gene3D G3DSA:1.10.140.10 4 104 3.0E-59 T 29-03-2018 IPR023453 Methionine repressor MetJ domain CPU03_RS08530 1bf0280dff291eb3f1684fa1a9f53e5d 106 SUPERFAMILY SSF47598 3 106 6.89E-58 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CPU03_RS14735 16c7558b983ad8d1854c8859777ec6bb 415 Pfam PF02687 FtsX-like permease family 302 407 3.3E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CPU03_RS14735 16c7558b983ad8d1854c8859777ec6bb 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 413 8.4E-204 T 29-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 CPU03_RS14735 16c7558b983ad8d1854c8859777ec6bb 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 412 2.3E-154 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CPU03_RS14735 16c7558b983ad8d1854c8859777ec6bb 415 Pfam PF12704 MacB-like periplasmic core domain 27 241 8.7E-18 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 5.1E-82 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 PIRSF PIRSF000724 1 387 9.0E-132 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.2E-136 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 Gene3D G3DSA:3.40.50.1260 3 174 7.9E-60 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.963 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 SUPERFAMILY SSF53748 3 383 4.0E-143 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS10535 8b7187986531ba76ccef3e4bb16734b0 387 Gene3D G3DSA:3.40.50.1260 175 371 1.0E-74 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS09195 dcb27769dc21c9fe2651e98b436a480d 703 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 18 690 3.0E-167 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CPU03_RS09195 dcb27769dc21c9fe2651e98b436a480d 703 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 696 4.5E-275 T 29-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CPU03_RS17150 4bcbbfb183b3fa3d0538cbcc98fed73b 188 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 23 182 1.5E-28 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CPU03_RS17150 4bcbbfb183b3fa3d0538cbcc98fed73b 188 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 8 182 5.8E-32 T 29-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 PRINTS PR00969 Pili chaperone signature 73 94 4.8E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 PRINTS PR00969 Pili chaperone signature 24 33 4.8E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 PRINTS PR00969 Pili chaperone signature 102 119 4.8E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 PRINTS PR00969 Pili chaperone signature 128 143 4.8E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 PRINTS PR00969 Pili chaperone signature 164 179 4.8E-34 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 146 2.1E-44 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 SUPERFAMILY SSF49354 18 146 6.8E-42 T 29-03-2018 IPR008962 PapD-like CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 231 2.5E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 Gene3D G3DSA:2.60.40.10 23 147 4.7E-39 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 SUPERFAMILY SSF49584 140 233 5.1E-19 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS01190 7d9075e3a6ddf7958a60c7db6dd6925b 239 Gene3D G3DSA:2.60.40.10 149 239 3.2E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Gene3D G3DSA:3.40.1390.20 231 366 1.8E-28 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Gene3D G3DSA:3.40.50.10750 529 682 6.4E-65 T 29-03-2018 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Pfam PF07085 DRTGG domain 233 344 1.3E-29 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 SUPERFAMILY SSF52540 3 239 6.9E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Pfam PF13500 AAA domain 3 229 6.5E-53 T 29-03-2018 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 SUPERFAMILY SSF53659 392 710 6.99E-94 T 29-03-2018 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.0E-136 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 PIRSF PIRSF006107 1 713 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 SUPERFAMILY SSF75138 229 353 2.49E-25 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Gene3D G3DSA:3.40.50.300 1 230 7.4E-30 T 29-03-2018 CPU03_RS13240 2a5b90da0320b7377fd3c1cd8bed6806 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.4E-126 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 Pfam PF01012 Electron transfer flavoprotein domain 28 209 5.4E-32 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 SMART SM00893 21 214 3.4E-30 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 SUPERFAMILY SSF52402 1 253 7.78E-52 T 29-03-2018 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 Hamap MF_01055 Protein FixA [fixA]. 1 257 56.127 T 29-03-2018 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 158 178 - T 29-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 PIRSF PIRSF000090 1 256 1.8E-60 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CPU03_RS12115 3b793cd948619f8dc9f89c7b555ea8c0 257 Gene3D G3DSA:3.40.50.620 1 255 2.1E-48 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS08025 c0a931c474f0a7bd71bc0bf9c04c2d49 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 7.4E-182 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CPU03_RS08025 c0a931c474f0a7bd71bc0bf9c04c2d49 622 Pfam PF02705 K+ potassium transporter 14 544 3.4E-205 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CPU03_RS08025 c0a931c474f0a7bd71bc0bf9c04c2d49 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.434 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 Pfam PF04751 Protein of unknown function (DUF615) 27 177 4.0E-58 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 17 181 24.583 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 PIRSF PIRSF016183 11 184 5.0E-73 T 29-03-2018 IPR006839 Ribosome-associated, YjgA CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 Gene3D G3DSA:1.10.60.30 39 107 7.5E-27 T 29-03-2018 CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 SUPERFAMILY SSF158710 38 180 1.7E-52 T 29-03-2018 IPR023153 PSPTO4464-like domain CPU03_RS10480 74988eb230d3419a2d65144adb404471 184 Gene3D G3DSA:1.10.60.30 112 184 2.4E-28 T 29-03-2018 CPU03_RS14750 a7b53129ea6cfcafa19a17efdd91050c 373 SUPERFAMILY SSF51197 6 290 1.17E-75 T 29-03-2018 CPU03_RS14750 a7b53129ea6cfcafa19a17efdd91050c 373 Gene3D G3DSA:2.60.120.650 2 209 4.4E-31 T 29-03-2018 CPU03_RS14750 a7b53129ea6cfcafa19a17efdd91050c 373 Pfam PF08007 Cupin superfamily protein 9 309 3.8E-99 T 29-03-2018 IPR003347 JmjC domain CPU03_RS14750 a7b53129ea6cfcafa19a17efdd91050c 373 SMART SM00558 92 215 9.8E-12 T 29-03-2018 IPR003347 JmjC domain CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 SUPERFAMILY SSF54211 2 133 1.18E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 Gene3D G3DSA:3.30.70.240 137 200 2.4E-15 T 29-03-2018 CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 Gene3D G3DSA:3.30.230.30 7 135 1.2E-39 T 29-03-2018 IPR001498 Impact, N-terminal CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 Pfam PF09186 Domain of unknown function (DUF1949) 144 196 7.6E-12 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 29-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 Pfam PF01205 Uncharacterized protein family UPF0029 19 126 1.0E-28 T 29-03-2018 IPR001498 Impact, N-terminal CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 SUPERFAMILY SSF54980 137 204 7.62E-14 T 29-03-2018 IPR035647 EF-G domain III/V-like CPU03_RS07175 7e88e3afadf7ce6c5fc6a4be913c2738 205 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 203 1.7E-72 T 29-03-2018 IPR015796 Impact family, bacterial/archaeal CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.3E-26 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 Pfam PF00375 Sodium:dicarboxylate symporter family 30 442 2.5E-101 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 Gene3D G3DSA:1.10.3860.10 20 450 4.0E-95 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS00720 f99adce0f5f9f761586972729bb3cbc8 462 SUPERFAMILY SSF118215 29 442 8.63E-96 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS05020 876d392097fbcbe7235ae2517244caac 145 Pfam PF01797 Transposase IS200 like 12 129 1.6E-38 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CPU03_RS05020 876d392097fbcbe7235ae2517244caac 145 SUPERFAMILY SSF143422 1 130 5.62E-45 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CPU03_RS05020 876d392097fbcbe7235ae2517244caac 145 SMART SM01321 11 129 3.6E-42 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CPU03_RS05020 876d392097fbcbe7235ae2517244caac 145 Gene3D G3DSA:3.30.70.1290 2 137 1.5E-23 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 4.1E-25 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 163 214 5.5E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 SUPERFAMILY SSF56784 1 247 1.1E-65 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 PIRSF PIRSF000915 1 250 4.6E-52 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 Gene3D G3DSA:3.40.50.1000 1 249 5.7E-32 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 Pfam PF13242 HAD-hyrolase-like 174 246 3.2E-20 T 29-03-2018 CPU03_RS12355 c23473fd6be7e9edb9b62dfab02ea393 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 1.0E-61 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CPU03_RS02240 79e7e6d53967d8d293a93d2f6cba1f3a 227 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 225 5.0E-44 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CPU03_RS02240 79e7e6d53967d8d293a93d2f6cba1f3a 227 SMART SM00858 103 165 3.5E-8 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CPU03_RS02240 79e7e6d53967d8d293a93d2f6cba1f3a 227 Gene3D G3DSA:3.90.1210.10 102 166 2.1E-10 T 29-03-2018 CPU03_RS02240 79e7e6d53967d8d293a93d2f6cba1f3a 227 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 92 225 7.5E-37 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 54.935 T 29-03-2018 IPR023018 Transport protein YidE, putative CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Gene3D G3DSA:3.30.70.1450 280 366 6.6E-14 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.9E-41 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 5.4E-49 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Pfam PF02080 TrkA-C domain 293 359 4.4E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 SUPERFAMILY SSF116726 285 360 4.97E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 8.7E-47 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Pfam PF06826 Predicted Permease Membrane Region 11 179 2.1E-44 T 29-03-2018 IPR006512 YidE/YbjL duplication CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 Gene3D G3DSA:3.30.70.1450 192 279 9.5E-6 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS07890 5093f5cf8f6d193040ba98f702b142b0 552 SUPERFAMILY SSF116726 205 270 1.57E-7 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CPU03_RS07560 d6654a79549d9348afa5ef19746d41ad 404 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CPU03_RS07560 d6654a79549d9348afa5ef19746d41ad 404 Gene3D G3DSA:1.20.1250.20 196 404 3.7E-23 T 29-03-2018 CPU03_RS07560 d6654a79549d9348afa5ef19746d41ad 404 SUPERFAMILY SSF103473 4 400 3.66E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS07560 d6654a79549d9348afa5ef19746d41ad 404 Pfam PF07690 Major Facilitator Superfamily 18 350 7.5E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS07560 d6654a79549d9348afa5ef19746d41ad 404 Gene3D G3DSA:1.20.1250.20 1 195 7.3E-36 T 29-03-2018 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 Gene3D G3DSA:3.40.190.10 30 152 2.1E-8 T 29-03-2018 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 Pfam PF01547 Bacterial extracellular solute-binding protein 45 313 4.4E-39 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 SUPERFAMILY SSF53850 29 395 6.73E-94 T 29-03-2018 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 29-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 130 149 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 70 88 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 357 376 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 233 252 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 299 320 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 151 170 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 171 190 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 PRINTS PR00181 Maltose binding protein signature 36 54 2.4E-92 T 29-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CPU03_RS06895 4fceef3f396a06174dfe2e810321f94d 397 Gene3D G3DSA:3.40.190.10 153 397 4.3E-39 T 29-03-2018 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Gene3D G3DSA:3.40.190.10 253 324 0.0063 T 29-03-2018 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Gene3D G3DSA:1.10.10.10 1 85 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 SUPERFAMILY SSF46785 1 85 1.63E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Pfam PF03466 LysR substrate binding domain 91 292 6.7E-41 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Gene3D G3DSA:3.40.190.10 181 252 5.4E-22 T 29-03-2018 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 Gene3D G3DSA:3.40.190.10 91 180 9.6E-21 T 29-03-2018 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS00825 b8f977358d0591fd7cad1bbb627f57e7 324 SUPERFAMILY SSF53850 91 320 1.76E-44 T 29-03-2018 CPU03_RS17195 7f6dcd4060081b45178409eaf14f0138 246 Gene3D G3DSA:3.30.450.90 152 243 0.0019 T 29-03-2018 CPU03_RS17195 7f6dcd4060081b45178409eaf14f0138 246 Pfam PF05818 Enterobacterial TraT complement resistance protein 33 246 5.3E-77 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CPU03_RS17195 7f6dcd4060081b45178409eaf14f0138 246 PIRSF PIRSF002859 1 246 1.4E-126 T 29-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CPU03_RS00565 0c207b2b73fd30cf023d4aea71d07bf9 284 Hamap MF_01604 Thiamine kinase [thiK]. 5 282 37.975 T 29-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CPU03_RS00565 0c207b2b73fd30cf023d4aea71d07bf9 284 Gene3D G3DSA:3.90.1200.10 60 277 3.5E-23 T 29-03-2018 CPU03_RS00565 0c207b2b73fd30cf023d4aea71d07bf9 284 Pfam PF01636 Phosphotransferase enzyme family 86 236 2.8E-10 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CPU03_RS00565 0c207b2b73fd30cf023d4aea71d07bf9 284 SUPERFAMILY SSF56112 5 272 2.19E-29 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS03615 0340d01e64644b334d971f378592281f 294 Gene3D G3DSA:3.40.50.10490 95 292 4.2E-40 T 29-03-2018 CPU03_RS03615 0340d01e64644b334d971f378592281f 294 SUPERFAMILY SSF46689 13 87 2.87E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS03615 0340d01e64644b334d971f378592281f 294 SUPERFAMILY SSF53697 107 286 2.62E-41 T 29-03-2018 CPU03_RS03615 0340d01e64644b334d971f378592281f 294 Pfam PF01380 SIS domain 140 268 5.4E-22 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS03615 0340d01e64644b334d971f378592281f 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 87 7.9E-24 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CPU03_RS03615 0340d01e64644b334d971f378592281f 294 Gene3D G3DSA:1.10.10.10 9 88 6.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS00860 827709948982284a3fa3008b28b274f8 245 Pfam PF02654 Cobalamin-5-phosphate synthase 8 242 6.0E-53 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00860 827709948982284a3fa3008b28b274f8 245 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 245 43.26 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00860 827709948982284a3fa3008b28b274f8 245 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 2 244 5.4E-58 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS04255 72f96660e0df8f1b1f7ffd54a1d17a0b 126 Pfam PF04241 Protein of unknown function (DUF423) 15 101 7.1E-25 T 29-03-2018 IPR006696 Protein of unknown function DUF423 CPU03_RS01180 4ae4b3a5c43df3a98c5766750bf698a6 383 SUPERFAMILY SSF49401 281 382 3.48E-9 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS01180 4ae4b3a5c43df3a98c5766750bf698a6 383 SUPERFAMILY SSF49401 203 248 3.48E-9 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS01180 4ae4b3a5c43df3a98c5766750bf698a6 383 Gene3D G3DSA:2.60.40.1090 62 168 0.023 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS01180 4ae4b3a5c43df3a98c5766750bf698a6 383 Gene3D G3DSA:2.60.40.1090 188 383 1.1E-18 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 Gene3D G3DSA:3.30.70.920 64 158 1.9E-27 T 29-03-2018 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 SMART SM00344 12 121 3.5E-55 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.1E-24 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 29-03-2018 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS14130 db88c63554cd451f0055ca72b97894ec 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CPU03_RS13670 3784b7d9d8956183dfef77f7b6129b33 308 Pfam PF05971 Protein of unknown function (DUF890) 13 308 1.9E-126 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CPU03_RS13670 3784b7d9d8956183dfef77f7b6129b33 308 PIRSF PIRSF029038 4 308 6.0E-139 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CPU03_RS13670 3784b7d9d8956183dfef77f7b6129b33 308 SUPERFAMILY SSF53335 52 308 3.48E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13670 3784b7d9d8956183dfef77f7b6129b33 308 Gene3D G3DSA:3.40.50.150 47 308 3.7E-52 T 29-03-2018 CPU03_RS13670 3784b7d9d8956183dfef77f7b6129b33 308 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 14 308 51.298 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CPU03_RS11270 1e6b6964477f55e53de8dd87e9339be1 351 SUPERFAMILY SSF63520 241 342 4.84E-13 T 29-03-2018 IPR011608 PRD domain GO:0006355 CPU03_RS11270 1e6b6964477f55e53de8dd87e9339be1 351 Pfam PF00874 PRD domain 250 337 4.7E-10 T 29-03-2018 IPR011608 PRD domain GO:0006355 CPU03_RS11270 1e6b6964477f55e53de8dd87e9339be1 351 Gene3D G3DSA:1.10.1790.10 238 343 1.3E-12 T 29-03-2018 IPR011608 PRD domain GO:0006355 CPU03_RS10375 695cab9c379c6248b65a074f20298b1b 29 Pfam PF08173 Membrane bound YbgT-like protein 1 25 9.6E-12 T 29-03-2018 IPR012994 Membrane bound YbgT-like CPU03_RS10985 a3f32ab51dc025875bfcc9b4cbd6ca0e 110 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 27 103 9.0E-23 T 29-03-2018 CPU03_RS10985 a3f32ab51dc025875bfcc9b4cbd6ca0e 110 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 6 103 29.137 T 29-03-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 CPU03_RS10985 a3f32ab51dc025875bfcc9b4cbd6ca0e 110 Gene3D G3DSA:1.10.890.10 27 103 3.8E-25 T 29-03-2018 CPU03_RS10985 a3f32ab51dc025875bfcc9b4cbd6ca0e 110 Pfam PF06411 HdeA/HdeB family 13 96 3.3E-21 T 29-03-2018 IPR010486 HNS-dependent expression A/B CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 SUPERFAMILY SSF53756 11 326 5.97E-49 T 29-03-2018 CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 SUPERFAMILY SSF53756 361 406 5.97E-49 T 29-03-2018 CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 Gene3D G3DSA:3.40.50.2000 192 393 4.2E-31 T 29-03-2018 CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 Pfam PF13439 Glycosyltransferase Family 4 21 181 5.0E-9 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 Gene3D G3DSA:3.40.50.2000 20 191 5.4E-6 T 29-03-2018 CPU03_RS07610 8af4e3f62d7c66d75249bb7674e36751 420 Pfam PF00534 Glycosyl transferases group 1 199 334 5.5E-25 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 Gene3D G3DSA:3.30.9.10 68 311 3.2E-33 T 29-03-2018 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 Pfam PF01266 FAD dependent oxidoreductase 4 348 4.1E-41 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 Gene3D G3DSA:3.40.50.720 4 67 0.0016 T 29-03-2018 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 SUPERFAMILY SSF54373 212 299 3.3E-6 T 29-03-2018 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 SUPERFAMILY SSF51905 2 216 5.61E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14685 48ec08f743cadd5b44641a236c6916ec 374 SUPERFAMILY SSF51905 312 370 5.61E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS00590 a93d52a1fe18b5a63fc8b8f76b454dab 179 PIRSF PIRSF034445 1 170 1.3E-25 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS00590 a93d52a1fe18b5a63fc8b8f76b454dab 179 Pfam PF07813 LTXXQ motif family protein 64 159 2.0E-16 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 Gene3D G3DSA:1.10.260.40 2 55 1.9E-22 T 29-03-2018 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 Gene3D G3DSA:3.40.50.2300 56 173 5.4E-33 T 29-03-2018 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.6E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 SUPERFAMILY SSF47413 1 59 1.77E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 Gene3D G3DSA:3.40.50.2300 174 312 3.6E-44 T 29-03-2018 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 SMART SM00354 1 71 4.2E-37 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 9.1E-35 T 29-03-2018 CPU03_RS10890 350eb4261013bdabba296fbd4c5a7422 335 SUPERFAMILY SSF53822 61 331 2.86E-84 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS15950 8362ad5ef3f05cd85e240d2af8620e49 109 Gene3D G3DSA:3.30.2310.20 2 96 2.9E-13 T 29-03-2018 CPU03_RS15950 8362ad5ef3f05cd85e240d2af8620e49 109 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 12 98 9.2E-36 T 29-03-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Gene3D G3DSA:3.40.309.10 230 403 1.1E-27 T 29-03-2018 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 851 1.9E-114 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 PIRSF PIRSF000111 1 866 0.0 T 29-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Gene3D G3DSA:1.20.1090.10 644 868 2.3E-59 T 29-03-2018 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Pfam PF00171 Aldehyde dehydrogenase family 4 400 9.3E-29 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Gene3D G3DSA:3.40.50.1970 430 643 1.9E-52 T 29-03-2018 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 SUPERFAMILY SSF56796 451 864 1.7E-118 T 29-03-2018 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 Gene3D G3DSA:3.40.605.10 1 229 1.7E-32 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS01050 92720ae901360477fee4db46e6f5c43a 889 SUPERFAMILY SSF53720 6 453 8.51E-85 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 SUPERFAMILY SSF53254 4 246 1.94E-77 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 PIRSF PIRSF000709 173 236 8.9 T 29-03-2018 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 PIRSF PIRSF000709 3 114 1.3E-10 T 29-03-2018 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.166 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 29-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 Gene3D G3DSA:3.40.50.1240 2 250 4.3E-68 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 SMART SM00855 5 191 1.6E-29 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 3.2E-125 T 29-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CPU03_RS12640 7b0a2a2d4a59ad4b330a02ba2f0d168a 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 1.0E-30 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 Gene3D G3DSA:1.10.1040.10 181 436 1.8E-111 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 2.3E-50 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 2.2E-224 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 Gene3D G3DSA:3.40.50.720 1 180 2.3E-34 T 29-03-2018 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 SUPERFAMILY SSF51735 4 172 1.12E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PIRSF PIRSF000109 1 471 1.1E-236 T 29-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 Gene3D G3DSA:1.20.5.320 437 470 1.9E-20 T 29-03-2018 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 SUPERFAMILY SSF48179 177 469 4.01E-130 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 8.4E-134 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 29-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 SMART SM01350 179 469 5.6E-221 T 29-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS02345 78c3829056b78edba1407f02e56b270e 471 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.3E-89 T 29-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 SUPERFAMILY SSF48208 25 357 4.76E-91 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 183 200 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 56 69 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 337 351 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 219 230 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 244 253 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 PRINTS PR00735 Glycosyl hydrolase family 8 signature 118 136 4.5E-17 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 Pfam PF01270 Glycosyl hydrolases family 8 24 351 3.1E-81 T 29-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CPU03_RS08700 9b07ecb955b42d623dd786b3154c2fba 374 Gene3D G3DSA:1.50.10.10 26 366 8.3E-90 T 29-03-2018 CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 Hamap MF_00018 UPF0758 protein YicR [yicR]. 7 227 48.159 T 29-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 176 181 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 Pfam PF04002 RadC-like JAB domain 107 225 7.0E-42 T 29-03-2018 IPR025657 RadC-like JAB domain CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 227 1.3E-78 T 29-03-2018 IPR001405 RadC protein CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 Gene3D G3DSA:1.10.150.20 29 87 6.3E-4 T 29-03-2018 CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 Gene3D G3DSA:3.40.140.10 88 227 3.9E-44 T 29-03-2018 CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 SUPERFAMILY SSF102712 120 195 2.75E-5 T 29-03-2018 CPU03_RS07665 ed171023b846f3924e178301d69c9bcd 227 SUPERFAMILY SSF47781 20 93 1.26E-11 T 29-03-2018 IPR010994 RuvA domain 2-like CPU03_RS05870 4fbcf82e5b192a666b0f9c62f1715b87 469 Gene3D G3DSA:3.20.20.140 3 88 9.4E-28 T 29-03-2018 CPU03_RS05870 4fbcf82e5b192a666b0f9c62f1715b87 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.585 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CPU03_RS05870 4fbcf82e5b192a666b0f9c62f1715b87 469 Gene3D G3DSA:3.20.20.140 89 467 1.9E-153 T 29-03-2018 CPU03_RS05870 4fbcf82e5b192a666b0f9c62f1715b87 469 SUPERFAMILY SSF51556 3 465 1.67E-179 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS05870 4fbcf82e5b192a666b0f9c62f1715b87 469 Pfam PF02614 Glucuronate isomerase 1 465 1.9E-225 T 29-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PIRSF PIRSF000676 1 308 7.6E-79 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.2E-31 T 29-03-2018 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.2E-31 T 29-03-2018 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.2E-31 T 29-03-2018 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.2E-31 T 29-03-2018 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.2E-31 T 29-03-2018 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 29.395 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 Gene3D G3DSA:3.30.230.10 1 165 8.8E-26 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 29-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 Pfam PF08544 GHMP kinases C terminal 216 286 3.1E-9 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 1.7E-13 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 306 5.5E-103 T 29-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 Gene3D G3DSA:3.30.70.890 167 308 7.0E-29 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 SUPERFAMILY SSF54211 1 178 1.29E-30 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS04990 50ec0f57c9719a67497a7f9e41dd32ed 309 SUPERFAMILY SSF55060 172 289 1.77E-32 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 SUPERFAMILY SSF53955 58 357 2.62E-89 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 Gene3D G3DSA:1.10.8.350 134 236 5.7E-35 T 29-03-2018 CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 Gene3D G3DSA:1.10.8.350 55 133 1.9E-8 T 29-03-2018 CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 Pfam PF13406 Transglycosylase SLT domain 60 353 4.5E-90 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 Gene3D G3DSA:1.10.530.10 242 362 2.3E-31 T 29-03-2018 CPU03_RS12910 2f39e3af791c4dac1af6cb18e68d3107 362 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 65 356 2.7E-117 T 29-03-2018 IPR011757 Lytic transglycosylase MltB CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 Gene3D G3DSA:2.40.100.10 17 188 1.4E-53 T 29-03-2018 IPR029000 Cyclophilin-like domain CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 185 2.1E-49 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 4.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 4.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 4.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 PIRSF PIRSF001467 15 188 3.9E-31 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 SUPERFAMILY SSF50891 25 186 3.21E-60 T 29-03-2018 IPR029000 Cyclophilin-like domain CPU03_RS09285 213519ebfe98fd73e53aa5e2e47e36a7 188 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CPU03_RS07620 c776aa0ca3520fc382e9f14b8cffcfb4 358 Gene3D G3DSA:3.40.50.2000 177 358 1.8E-40 T 29-03-2018 CPU03_RS07620 c776aa0ca3520fc382e9f14b8cffcfb4 358 SUPERFAMILY SSF53756 14 358 5.15E-87 T 29-03-2018 CPU03_RS07620 c776aa0ca3520fc382e9f14b8cffcfb4 358 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 15 358 1.5E-163 T 29-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CPU03_RS07620 c776aa0ca3520fc382e9f14b8cffcfb4 358 Gene3D G3DSA:3.40.50.2000 9 174 2.3E-39 T 29-03-2018 CPU03_RS07620 c776aa0ca3520fc382e9f14b8cffcfb4 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 87 327 6.7E-53 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CPU03_RS12100 70102f5d43bcf63549deb313f0af2a9c 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 40 92 1.6E-5 T 29-03-2018 CPU03_RS12100 70102f5d43bcf63549deb313f0af2a9c 95 PIRSF PIRSF036548 1 95 1.1E-37 T 29-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 CPU03_RS12100 70102f5d43bcf63549deb313f0af2a9c 95 Gene3D G3DSA:3.30.70.20 40 71 4.3E-4 T 29-03-2018 CPU03_RS12100 70102f5d43bcf63549deb313f0af2a9c 95 SUPERFAMILY SSF54862 41 93 5.15E-9 T 29-03-2018 CPU03_RS04520 e89d5bb980b5c2a3ecd55d923e066a8e 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 21 105 5.2E-12 T 29-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CPU03_RS04520 e89d5bb980b5c2a3ecd55d923e066a8e 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 22 114 6.0E-34 T 29-03-2018 CPU03_RS17075 29a53990393f4bf4550b197b6cf9bd2e 75 SUPERFAMILY SSF89447 1 62 2.04E-5 T 29-03-2018 CPU03_RS17075 29a53990393f4bf4550b197b6cf9bd2e 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 32 2.7E-6 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 SMART SM00849 11 165 6.2E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.111 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 SUPERFAMILY SSF56281 1 251 5.69E-72 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 9.0E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 251 3.8E-103 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 8.2E-27 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 Gene3D G3DSA:3.60.15.10 1 251 1.7E-72 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS11235 5e991498f52bb999c53ba75bfc398f0d 251 PIRSF PIRSF005457 1 251 7.5E-92 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 348 528 8.2E-69 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 213 231 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 494 517 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 410 433 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 62 83 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 154 174 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 246 261 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 319 339 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR00701 60kDa inner membrane protein signature 457 479 6.8E-106 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 Pfam PF02096 60Kd inner membrane protein 349 528 2.4E-60 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 347 2.6E-114 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 530 26.528 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 Pfam PF14849 YidC periplasmic domain 57 338 1.1E-89 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR01900 YidC translocation/secretion protein signature 334 350 2.1E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR01900 YidC translocation/secretion protein signature 463 478 2.1E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS08185 775ba6efb30ec64d9435d520a3202c5e 541 PRINTS PR01900 YidC translocation/secretion protein signature 483 507 2.1E-29 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 Gene3D G3DSA:1.10.287.680 1 47 3.8E-26 T 29-03-2018 IPR023145 YfbU, helix-hairpin domain CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 PIRSF PIRSF006272 1 164 4.7E-76 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.446 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 SUPERFAMILY SSF116960 1 164 4.71E-67 T 29-03-2018 CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 3.0E-81 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 Gene3D G3DSA:1.10.3190.10 54 164 1.8E-42 T 29-03-2018 IPR023146 YfbU, alpha-helical bundle domain CPU03_RS13255 5b15c42c01c3e420059ece65640e37aa 164 Pfam PF03887 YfbU domain 1 164 1.3E-69 T 29-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 378 5.2E-186 T 29-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 Gene3D G3DSA:1.20.1090.10 185 382 5.1E-64 T 29-03-2018 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 SUPERFAMILY SSF56796 6 382 9.55E-125 T 29-03-2018 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 Gene3D G3DSA:3.40.50.1970 9 184 1.0E-43 T 29-03-2018 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.8E-118 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CPU03_RS06525 28de1c265c314ff28ac83d8ea08035c5 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CPU03_RS15785 dac340353fa2e6ede7b99497ec17ddd4 81 Gene3D G3DSA:1.10.1660.20 5 79 3.9E-23 T 29-03-2018 CPU03_RS15785 dac340353fa2e6ede7b99497ec17ddd4 81 Pfam PF07825 Excisionase-like protein 4 58 6.7E-13 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CPU03_RS15785 dac340353fa2e6ede7b99497ec17ddd4 81 SUPERFAMILY SSF46955 4 59 1.16E-15 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 PIRSF PIRSF006205 1 399 2.6E-152 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Gene3D G3DSA:3.40.50.720 1 151 3.3E-51 T 29-03-2018 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 388 2.0E-41 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 392 1.3E-169 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 393 45.761 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 SUPERFAMILY SSF55347 127 275 6.54E-60 T 29-03-2018 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Gene3D G3DSA:1.10.1740.10 313 397 3.0E-28 T 29-03-2018 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 SUPERFAMILY SSF69055 303 394 1.44E-30 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 240 1.7E-35 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 133 1.6E-46 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CPU03_RS04170 2af64fda34687e9a3b4dcd53611b9395 399 SUPERFAMILY SSF51735 2 151 6.06E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07590 8c37f88e8c7f8e247625ca1151500491 320 Gene3D G3DSA:3.40.50.2000 1 163 5.9E-40 T 29-03-2018 CPU03_RS07590 8c37f88e8c7f8e247625ca1151500491 320 Gene3D G3DSA:3.40.50.2000 164 319 2.7E-30 T 29-03-2018 CPU03_RS07590 8c37f88e8c7f8e247625ca1151500491 320 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 316 1.9E-127 T 29-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CPU03_RS07590 8c37f88e8c7f8e247625ca1151500491 320 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 308 4.9E-71 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CPU03_RS07590 8c37f88e8c7f8e247625ca1151500491 320 SUPERFAMILY SSF53756 2 316 1.04E-69 T 29-03-2018 CPU03_RS06990 b00d3555d6eb42476dce5ae9651cb2b2 189 Pfam PF01184 GPR1/FUN34/yaaH family 5 182 9.8E-43 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CPU03_RS06990 b00d3555d6eb42476dce5ae9651cb2b2 189 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 PIRSF PIRSF000903 1 275 9.7E-117 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 Gene3D G3DSA:3.60.21.10 1 279 2.2E-45 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 Pfam PF00149 Calcineurin-like phosphoesterase 1 76 8.9E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 273 3.1E-139 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 48.911 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CPU03_RS04835 bdc59f8c061caeb7a8d1233bc24b5ce1 279 SUPERFAMILY SSF56300 1 273 3.01E-56 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 SUPERFAMILY SSF142019 96 302 3.14E-57 T 29-03-2018 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Gene3D G3DSA:3.30.70.20 384 538 6.1E-16 T 29-03-2018 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 446 6.6E-180 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Gene3D G3DSA:3.30.70.20 326 383 0.026 T 29-03-2018 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 8.9E-47 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 113 1.3E-29 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Pfam PF10531 SLBB domain 296 345 1.2E-10 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 748 234.553 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 SUPERFAMILY SSF46548 337 445 9.07E-20 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS16340 d97094ed73ac225f528594e1019fbb31 836 Pfam PF12838 4Fe-4S dicluster domain 378 431 2.3E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 SUPERFAMILY SSF117892 125 256 4.32E-22 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 Pfam PF12221 Bacterial membrane protein N terminal 1 60 2.4E-14 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 TIGRFAM TIGR01933 hflK: HflK protein 94 353 4.9E-123 T 29-03-2018 IPR010201 HflK GO:0016021 CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 SMART SM00244 92 252 7.4E-44 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 Pfam PF01145 SPFH domain / Band 7 family 96 267 8.1E-30 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 PRINTS PR00721 Stomatin signature 146 167 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 PRINTS PR00721 Stomatin signature 99 121 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS06285 ca9825553b6cd1cdbfddac81d448dd3d 418 PRINTS PR00721 Stomatin signature 181 198 2.2E-6 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS04570 fcb1b338f9b0c95f7deb69e40ed3b119 459 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CPU03_RS04570 fcb1b338f9b0c95f7deb69e40ed3b119 459 PIRSF PIRSF006060 1 454 7.4E-76 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS04570 fcb1b338f9b0c95f7deb69e40ed3b119 459 Pfam PF00324 Amino acid permease 17 451 8.2E-121 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 SUPERFAMILY SSF56655 1 259 9.16E-86 T 29-03-2018 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.7E-60 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 Pfam PF00459 Inositol monophosphatase family 2 259 4.9E-72 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 Gene3D G3DSA:3.30.540.10 1 145 9.6E-47 T 29-03-2018 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 Gene3D G3DSA:3.40.190.80 146 267 4.3E-37 T 29-03-2018 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CPU03_RS11275 193cf08cc1366b1a4508859da142a179 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.9E-36 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CPU03_RS11130 7c394c60215b1bf08bc0cfe0ca1e6c8f 256 Pfam PF04338 Protein of unknown function, DUF481 49 255 5.8E-53 T 29-03-2018 IPR007433 Protein of unknown function DUF481 CPU03_RS15915 c5d7df8d18860fad9ef13d97e6923dbe 170 Gene3D G3DSA:3.30.2020.10 1 73 1.3E-9 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS15915 c5d7df8d18860fad9ef13d97e6923dbe 170 SUPERFAMILY SSF143880 1 73 3.27E-11 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS15915 c5d7df8d18860fad9ef13d97e6923dbe 170 Pfam PF10387 Protein of unknown function (DUF2442) 4 68 1.8E-6 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 150 1.9E-29 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 Gene3D G3DSA:1.10.150.20 174 251 1.9E-22 T 29-03-2018 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 Gene3D G3DSA:3.40.50.1010 3 173 3.2E-41 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 SUPERFAMILY SSF47807 159 251 9.12E-22 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 SUPERFAMILY SSF88723 4 159 2.75E-37 T 29-03-2018 IPR029060 PIN domain-like CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 9.9E-25 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 SMART SM00475 3 250 2.5E-85 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 43.213 T 29-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 CPU03_RS04245 3750a0c4c22f3943fe95db0a2a674a36 254 SMART SM00279 162 197 2.1E-10 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CPU03_RS05580 07fae4ff71fc376acfe98de0f814a41f 164 SUPERFAMILY SSF52141 4 162 1.83E-44 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS05580 07fae4ff71fc376acfe98de0f814a41f 164 Pfam PF03167 Uracil DNA glycosylase superfamily 7 154 3.5E-24 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS05580 07fae4ff71fc376acfe98de0f814a41f 164 SMART SM00986 3 161 0.0012 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS05580 07fae4ff71fc376acfe98de0f814a41f 164 Gene3D G3DSA:3.40.470.10 4 164 1.2E-48 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS05580 07fae4ff71fc376acfe98de0f814a41f 164 SMART SM00987 3 161 0.0012 T 29-03-2018 CPU03_RS05845 de7f15607f8055d38c573d415abf6541 322 Pfam PF03741 Integral membrane protein TerC family 81 283 8.0E-56 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CPU03_RS05845 de7f15607f8055d38c573d415abf6541 322 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 313 1.7E-121 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CPU03_RS02685 f62a5cf875cdc42b2961040b3a0d0004 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 4.1E-27 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CPU03_RS02685 f62a5cf875cdc42b2961040b3a0d0004 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 3.0E-17 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 Gene3D G3DSA:3.30.70.100 180 273 2.1E-27 T 29-03-2018 CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 Pfam PF00924 Mechanosensitive ion channel 72 268 1.4E-56 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 SUPERFAMILY SSF50182 114 179 7.52E-17 T 29-03-2018 IPR010920 LSM domain CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 SUPERFAMILY SSF82689 181 278 1.16E-31 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 Gene3D G3DSA:2.30.30.60 129 179 7.3E-15 T 29-03-2018 CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 Pfam PF05552 Conserved TM helix 20 64 3.6E-12 T 29-03-2018 IPR008910 Conserved TM helix CPU03_RS10545 141cea3015690bf6fa0a7e3761a3d70e 288 SUPERFAMILY SSF82861 28 112 7.06E-17 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CPU03_RS10350 9e3feec6a741cb8062800c781ad9e038 158 SUPERFAMILY SSF52833 31 151 4.16E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS10350 9e3feec6a741cb8062800c781ad9e038 158 Pfam PF07449 Hydrogenase-1 expression protein HyaE 34 139 8.7E-41 T 29-03-2018 IPR010893 [NiFe]-hydrogenase maturation factor HyaE CPU03_RS10350 9e3feec6a741cb8062800c781ad9e038 158 Gene3D G3DSA:3.40.30.10 25 149 9.9E-8 T 29-03-2018 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 12 272 4.7E-121 T 29-03-2018 IPR014260 Sulphite reductase, subunit B CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 SUPERFAMILY SSF63380 16 102 7.17E-17 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 Gene3D G3DSA:3.40.50.80 93 232 2.4E-20 T 29-03-2018 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 SUPERFAMILY SSF52343 99 266 5.37E-27 T 29-03-2018 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 Gene3D G3DSA:2.40.30.10 16 92 1.0E-7 T 29-03-2018 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 PIRSF PIRSF006816 13 272 2.1E-68 T 29-03-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 Pfam PF00175 Oxidoreductase NAD-binding domain 115 216 1.3E-13 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 PRINTS PR00410 Phenol hydroxylase reductase family signature 113 132 1.3E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 PRINTS PR00410 Phenol hydroxylase reductase family signature 203 211 1.3E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.3E-6 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 235 265 7.9E-9 T 29-03-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CPU03_RS16505 a2815b05d14386af05d2e3b365f45c3b 272 Gene3D G3DSA:2.10.240.10 235 267 1.3E-9 T 29-03-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CPU03_RS05300 d6091da63cc05be4330b718ecaaa4006 84 SUPERFAMILY SSF82657 2 81 3.66E-30 T 29-03-2018 IPR002634 BolA protein CPU03_RS05300 d6091da63cc05be4330b718ecaaa4006 84 PIRSF PIRSF003113 1 83 9.8E-24 T 29-03-2018 IPR002634 BolA protein CPU03_RS05300 d6091da63cc05be4330b718ecaaa4006 84 Pfam PF01722 BolA-like protein 19 74 3.5E-16 T 29-03-2018 IPR002634 BolA protein CPU03_RS05300 d6091da63cc05be4330b718ecaaa4006 84 Gene3D G3DSA:3.30.300.90 1 83 5.5E-27 T 29-03-2018 CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 2 485 45.831 T 29-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 SUPERFAMILY SSF103473 8 199 2.35E-24 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 SUPERFAMILY SSF103473 243 480 2.35E-24 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 144 156 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 Pfam PF00854 POT family 81 441 4.1E-89 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 Gene3D G3DSA:1.20.1250.20 253 491 9.2E-10 T 29-03-2018 CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 482 3.1E-185 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CPU03_RS08835 766f82020295bfef7e2f08208afaf185 491 Gene3D G3DSA:1.20.1250.20 2 199 1.4E-22 T 29-03-2018 CPU03_RS07035 bb9206e2ef50d257e08d6f95260dc818 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 2.1E-80 T 29-03-2018 IPR007338 Protein of unknown function DUF416 CPU03_RS07035 bb9206e2ef50d257e08d6f95260dc818 196 Gene3D G3DSA:1.20.1590.10 5 194 2.1E-76 T 29-03-2018 IPR023381 YP001051499.1-like domain CPU03_RS06795 8983649d10121a53f5e8626e871f5518 158 Pfam PF01475 Ferric uptake regulator family 20 138 7.9E-15 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CPU03_RS06795 8983649d10121a53f5e8626e871f5518 158 SUPERFAMILY SSF46785 12 144 1.11E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06795 8983649d10121a53f5e8626e871f5518 158 Gene3D G3DSA:1.10.10.10 1 91 7.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 Gene3D G3DSA:3.60.150.10 3 358 2.0E-158 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.0E-135 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 PIRSF PIRSF001456 3 358 4.9E-138 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 SUPERFAMILY SSF103263 4 352 1.44E-145 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 Pfam PF01264 Chorismate synthase 10 345 2.7E-140 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS13080 5e30ff1a3677a02bf9c84df54cc93664 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.189 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 SUPERFAMILY SSF46785 3 87 8.85E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 Gene3D G3DSA:3.40.190.10 90 226 1.1E-7 T 29-03-2018 CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 Gene3D G3DSA:1.10.10.10 1 88 3.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 SUPERFAMILY SSF53850 92 291 1.07E-27 T 29-03-2018 CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 Pfam PF03466 LysR substrate binding domain 94 289 6.0E-13 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS04925 db188874a4b2ef82144db45f16b04180 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07685 0ea7bea938a9eb96484f91fac63847ba 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.3E-69 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS07685 0ea7bea938a9eb96484f91fac63847ba 213 Pfam PF00156 Phosphoribosyl transferase domain 48 162 3.3E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS07685 0ea7bea938a9eb96484f91fac63847ba 213 Gene3D G3DSA:3.40.50.2020 1 193 9.1E-49 T 29-03-2018 CPU03_RS07685 0ea7bea938a9eb96484f91fac63847ba 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.931 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CPU03_RS07685 0ea7bea938a9eb96484f91fac63847ba 213 SUPERFAMILY SSF53271 2 212 6.39E-50 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS14875 dc098f08cb73a78eae288b7b0322c428 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 335 1.4E-89 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CPU03_RS14965 caf281647086ce459a1e44116065876f 445 Pfam PF02447 GntP family permease 9 444 1.6E-158 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS14965 caf281647086ce459a1e44116065876f 445 PIRSF PIRSF002746 2 445 2.6E-141 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS14965 caf281647086ce459a1e44116065876f 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 2.2E-166 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 SUPERFAMILY SSF55874 387 501 4.66E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 Pfam PF05231 MASE1 9 282 6.5E-19 T 29-03-2018 IPR007895 MASE1 CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 501 5.9E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 Gene3D G3DSA:3.30.565.10 278 503 4.8E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 Pfam PF07730 Histidine kinase 310 373 8.0E-11 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CPU03_RS08615 b33357d60ae44f1d8303d71238316bf1 510 SMART SM00387 413 504 4.6E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 Gene3D G3DSA:3.20.20.70 3 246 5.2E-46 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 PIRSF PIRSF006621 2 318 1.4E-79 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 Pfam PF01207 Dihydrouridine synthase (Dus) 9 288 6.1E-87 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 12 314 50.754 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CPU03_RS12745 34abe2d0169eda67464b597a9ad3857a 318 SUPERFAMILY SSF51395 6 300 1.19E-68 T 29-03-2018 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 SUPERFAMILY SSF50104 112 162 4.41E-5 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 Pfam PF02357 Transcription termination factor nusG 3 96 1.5E-18 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 SMART SM00738 1 100 1.1E-26 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 2.2E-59 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 Gene3D G3DSA:3.30.70.940 1 99 7.7E-19 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 Gene3D G3DSA:2.30.30.30 111 162 6.6E-6 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 45.816 T 29-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CPU03_RS07200 6fc3f65a740fbb6dd76cda311933794b 163 SUPERFAMILY SSF82679 2 98 3.66E-26 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 Gene3D G3DSA:1.10.10.60 60 110 4.5E-11 T 29-03-2018 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 SUPERFAMILY SSF55136 187 271 1.19E-10 T 29-03-2018 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 SUPERFAMILY SSF46689 58 107 4.35E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 SMART SM00342 22 105 2.5E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 Pfam PF12833 Helix-turn-helix domain 30 106 4.7E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 Gene3D G3DSA:1.10.10.60 3 59 1.2E-8 T 29-03-2018 CPU03_RS17005 a9be3b96ac365ab7e57d12eed592352b 271 Gene3D G3DSA:3.20.80.10 122 271 2.6E-6 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CPU03_RS01455 7816386580640b079cfb540d6a83cadc 273 SUPERFAMILY SSF117396 1 252 1.28E-62 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CPU03_RS01455 7816386580640b079cfb540d6a83cadc 273 Gene3D G3DSA:3.20.20.410 1 256 4.1E-58 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CPU03_RS01455 7816386580640b079cfb540d6a83cadc 273 Pfam PF01904 Protein of unknown function DUF72 21 249 5.5E-51 T 29-03-2018 IPR002763 Protein of unknown function DUF72 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 Gene3D G3DSA:3.40.309.10 273 464 9.0E-74 T 29-03-2018 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 4.6E-172 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 SUPERFAMILY SSF53720 9 481 6.81E-174 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 Gene3D G3DSA:3.40.605.10 7 272 1.8E-105 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS04965 86239cd92a30f962866bbb51260f0150 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.9E-230 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 Pfam PF00117 Glutamine amidotransferase class-I 3 190 2.1E-52 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.2E-37 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 Gene3D G3DSA:3.40.50.880 1 191 2.8E-56 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 1.5E-87 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-6 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-6 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.4E-15 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.4E-15 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.4E-15 T 29-03-2018 CPU03_RS09290 076363fc6cbcaf35ba7e993feff8400c 191 SUPERFAMILY SSF52317 1 190 1.41E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 6.3E-126 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 Pfam PF01048 Phosphorylase superfamily 15 217 2.9E-40 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 29-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 SUPERFAMILY SSF53167 3 234 1.11E-92 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 Gene3D G3DSA:3.40.50.1580 9 235 3.0E-56 T 29-03-2018 CPU03_RS05400 d2e5a21c3de673df64141833eab0962d 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.067 T 29-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 SUPERFAMILY SSF56042 143 309 3.74E-39 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 Gene3D G3DSA:3.30.1330.10 1 144 2.2E-31 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.557 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 SUPERFAMILY SSF55326 4 138 4.36E-32 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 301 6.7E-10 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 PIRSF PIRSF005303 1 322 1.3E-85 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.3E-111 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.9E-20 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS03440 ec157a281b45a5abe5acb1f8129351da 323 Gene3D G3DSA:3.90.650.10 145 323 3.0E-46 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.4E-27 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 Gene3D G3DSA:2.40.50.140 1 73 1.2E-26 T 29-03-2018 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 SMART SM00357 3 67 1.8E-25 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 PIRSF PIRSF002599 1 73 8.7E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 7.2E-38 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 SUPERFAMILY SSF50249 1 66 3.21E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-14 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-14 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14090 43ff8f695c7f6f8f38ab4fe81be4e73a 73 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-14 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12265 5e3157b2584cfda7b2a588ef24d61f0c 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 2.9E-24 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CPU03_RS12265 5e3157b2584cfda7b2a588ef24d61f0c 225 SUPERFAMILY SSF161098 14 210 6.28E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS12265 5e3157b2584cfda7b2a588ef24d61f0c 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 222 5.1E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS12265 5e3157b2584cfda7b2a588ef24d61f0c 225 Gene3D G3DSA:1.10.3720.10 1 224 3.9E-40 T 29-03-2018 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 Pfam PF13411 MerR HTH family regulatory protein 2 69 3.6E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.8E-63 T 29-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 Gene3D G3DSA:1.10.1660.10 58 138 2.2E-24 T 29-03-2018 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 SMART SM00422 2 71 7.2E-33 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 SUPERFAMILY SSF46955 2 121 1.87E-35 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 8.4E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 8.4E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 8.4E-14 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CPU03_RS09520 ffe5eebe357f7109a818c2212b99b305 154 Gene3D G3DSA:1.10.1660.10 1 57 1.5E-25 T 29-03-2018 CPU03_RS07335 36bac6f950dab1537db7b6b47a678f26 351 PIRSF PIRSF038991 3 349 1.2E-80 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CPU03_RS07335 36bac6f950dab1537db7b6b47a678f26 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 165 1.3E-38 T 29-03-2018 IPR017516 AbrB duplication CPU03_RS07335 36bac6f950dab1537db7b6b47a678f26 351 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 187 343 4.9E-45 T 29-03-2018 IPR017516 AbrB duplication CPU03_RS07335 36bac6f950dab1537db7b6b47a678f26 351 Pfam PF05145 Transition state regulatory protein AbrB 34 343 1.6E-98 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CPU03_RS07315 05da575d5b1c77d7582813c1210ee807 202 Pfam PF01810 LysE type translocator 14 200 3.8E-47 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS07315 05da575d5b1c77d7582813c1210ee807 202 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 17 198 6.1E-57 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 SUPERFAMILY SSF53187 397 482 1.09E-59 T 29-03-2018 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 SUPERFAMILY SSF53187 10 182 1.09E-59 T 29-03-2018 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 Pfam PF07687 Peptidase dimerisation domain 209 289 1.1E-6 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.0E-94 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 PIRSF PIRSF016599 1 485 5.2E-203 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 5.9E-176 T 29-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 Gene3D G3DSA:3.40.630.10 10 486 2.7E-46 T 29-03-2018 CPU03_RS03925 63058d320955b0c30e20744fb6b75612 486 Pfam PF01546 Peptidase family M20/M25/M40 73 480 1.8E-21 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CPU03_RS07855 73b398bf5160fa9916ac8b502e18d5b3 292 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 6 292 23.85 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CPU03_RS07855 73b398bf5160fa9916ac8b502e18d5b3 292 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 272 2.5E-95 T 29-03-2018 IPR017039 Virulence factor BrkB CPU03_RS07855 73b398bf5160fa9916ac8b502e18d5b3 292 PIRSF PIRSF035875 5 291 7.5E-62 T 29-03-2018 IPR017039 Virulence factor BrkB CPU03_RS07855 73b398bf5160fa9916ac8b502e18d5b3 292 Pfam PF03631 Virulence factor BrkB 25 270 3.5E-57 T 29-03-2018 IPR017039 Virulence factor BrkB CPU03_RS13795 e79d4782774de01d497db1133755ee71 245 Pfam PF00977 Histidine biosynthesis protein 1 233 9.1E-73 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CPU03_RS13795 e79d4782774de01d497db1133755ee71 245 SUPERFAMILY SSF51366 1 244 2.56E-64 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS13795 e79d4782774de01d497db1133755ee71 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 33.542 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CPU03_RS13795 e79d4782774de01d497db1133755ee71 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 8.7E-74 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CPU03_RS13795 e79d4782774de01d497db1133755ee71 245 Gene3D G3DSA:3.20.20.70 1 245 1.2E-52 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS03385 a55c5217ac8ce1f5cf377b57f3064143 196 Pfam PF01965 DJ-1/PfpI family 4 170 1.5E-43 T 29-03-2018 IPR002818 DJ-1/PfpI CPU03_RS03385 a55c5217ac8ce1f5cf377b57f3064143 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 7.1E-64 T 29-03-2018 IPR006287 Protein DJ-1 CPU03_RS03385 a55c5217ac8ce1f5cf377b57f3064143 196 Gene3D G3DSA:3.40.50.880 1 192 3.4E-36 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS03385 a55c5217ac8ce1f5cf377b57f3064143 196 SUPERFAMILY SSF52317 5 187 4.78E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 178 1.7E-42 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 SMART SM00342 207 290 1.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 Pfam PF12833 Helix-turn-helix domain 213 288 2.3E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 Gene3D G3DSA:1.10.10.60 244 296 4.5E-12 T 29-03-2018 CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 Gene3D G3DSA:1.10.10.60 185 243 3.5E-13 T 29-03-2018 CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 SUPERFAMILY SSF46689 243 294 1.21E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS06755 ada2a44197b61360847cbfdb1d5299c9 303 SUPERFAMILY SSF46689 190 241 1.08E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 64 1.1E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 SUPERFAMILY SSF48498 88 201 3.12E-17 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 Gene3D G3DSA:1.10.260.40 42 78 4.1E-9 T 29-03-2018 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 Gene3D G3DSA:1.10.10.60 1 41 2.0E-10 T 29-03-2018 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 SUPERFAMILY SSF46689 8 80 2.57E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 Gene3D G3DSA:1.10.357.10 79 203 1.2E-18 T 29-03-2018 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS14210 68fe3cd53751e4da87d1d04437b47715 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Gene3D G3DSA:3.30.70.20 165 188 0.0076 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Gene3D G3DSA:3.30.70.20 35 74 1.4E-4 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 SUPERFAMILY SSF54862 61 181 9.91E-15 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Gene3D G3DSA:3.30.70.20 142 164 1.9E-8 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Gene3D G3DSA:3.30.70.20 75 101 2.1E-8 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Gene3D G3DSA:3.30.70.20 102 141 5.4E-4 T 29-03-2018 CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Pfam PF12800 4Fe-4S binding domain 136 147 0.39 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Pfam PF12800 4Fe-4S binding domain 63 77 0.032 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS14175 b252037380272abe3a7c08296125c32b 190 Pfam PF12800 4Fe-4S binding domain 163 176 0.44 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 Pfam PF08298 PrkA AAA domain 20 380 6.6E-175 T 29-03-2018 IPR013153 PrkA AAA domain CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 8.3E-74 T 29-03-2018 IPR010650 PrkA C-terminal domain CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 Gene3D G3DSA:3.40.50.300 56 353 6.2E-13 T 29-03-2018 CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 SMART SM00763 19 380 3.0E-212 T 29-03-2018 IPR013153 PrkA AAA domain CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 SUPERFAMILY SSF52540 75 145 1.4E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 SUPERFAMILY SSF52540 241 368 1.4E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01225 9b0879dff379c957a4ea7dfa3333a6f5 644 PIRSF PIRSF000549 1 644 4.1E-289 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CPU03_RS08020 cea9167ef1188eab538b547daccec272 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 5.9E-45 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS08020 cea9167ef1188eab538b547daccec272 139 SUPERFAMILY SSF102546 1 139 1.09E-41 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS08020 cea9167ef1188eab538b547daccec272 139 Gene3D G3DSA:3.40.1650.10 1 139 4.6E-36 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS08020 cea9167ef1188eab538b547daccec272 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 31.8 T 29-03-2018 IPR023064 D-ribose pyranase GO:0016872 CPU03_RS15965 548b8d4f76959c7b8cd74e45f435846e 290 Pfam PF08346 AntA/AntB antirepressor 71 145 2.3E-21 T 29-03-2018 IPR013557 AntA/AntB antirepressor CPU03_RS01200 f366dbaeb52f7eab15d628c90cfbe699 213 SUPERFAMILY SSF49401 68 213 2.09E-19 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS01200 f366dbaeb52f7eab15d628c90cfbe699 213 Gene3D G3DSA:2.60.40.1090 28 213 1.7E-27 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS01200 f366dbaeb52f7eab15d628c90cfbe699 213 Pfam PF16970 Type-1 fimbrial protein, A 71 213 5.7E-11 T 29-03-2018 CPU03_RS14880 aad036553954217ad55de19e46f195c2 106 Gene3D G3DSA:3.40.50.2300 3 102 1.5E-40 T 29-03-2018 CPU03_RS14880 aad036553954217ad55de19e46f195c2 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 5.7E-40 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CPU03_RS14880 aad036553954217ad55de19e46f195c2 106 SUPERFAMILY SSF52794 3 100 2.62E-35 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS14880 aad036553954217ad55de19e46f195c2 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 1.8E-21 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 Pfam PF12697 Alpha/beta hydrolase family 16 257 1.0E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 Gene3D G3DSA:3.40.50.1820 3 269 2.8E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 4.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS16850 5e2d401aafdfe1d66f0c677d0fc99e82 269 SUPERFAMILY SSF53474 2 264 3.87E-59 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS01135 9f6ccef2b5425b1df74b575fe1a71401 182 Gene3D G3DSA:3.40.109.10 1 181 2.4E-32 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS01135 9f6ccef2b5425b1df74b575fe1a71401 182 PIRSF PIRSF000232 1 182 5.4E-64 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CPU03_RS01135 9f6ccef2b5425b1df74b575fe1a71401 182 SUPERFAMILY SSF55469 1 180 8.51E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS01135 9f6ccef2b5425b1df74b575fe1a71401 182 Pfam PF00881 Nitroreductase family 8 161 1.1E-22 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 Gene3D G3DSA:3.40.50.720 1 192 1.2E-34 T 29-03-2018 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 SUPERFAMILY SSF51735 1 333 1.18E-89 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 7.6E-32 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 7.6E-32 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 7.6E-32 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 7.6E-32 T 29-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 237 5.2E-54 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS02350 f3e32c486fde344c38147d7111730808 335 Gene3D G3DSA:3.90.25.10 193 335 9.4E-36 T 29-03-2018 CPU03_RS17145 4619026fd2b3a8530a5d415b4fbfa7c2 877 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 44 853 6.4E-270 T 29-03-2018 IPR014117 Type-IV secretion system protein TraC CPU03_RS17145 4619026fd2b3a8530a5d415b4fbfa7c2 877 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 38 277 8.3E-47 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CPU03_RS17145 4619026fd2b3a8530a5d415b4fbfa7c2 877 Gene3D G3DSA:3.40.50.300 344 795 1.2E-16 T 29-03-2018 CPU03_RS17145 4619026fd2b3a8530a5d415b4fbfa7c2 877 SUPERFAMILY SSF52540 441 764 3.54E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 SMART SM00052 492 734 8.7E-20 T 29-03-2018 IPR001633 EAL domain CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 Pfam PF00563 EAL domain 498 724 1.3E-36 T 29-03-2018 IPR001633 EAL domain CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 Gene3D G3DSA:3.30.70.270 314 480 5.5E-11 T 29-03-2018 CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 Gene3D G3DSA:3.20.20.450 491 742 1.3E-39 T 29-03-2018 IPR001633 EAL domain CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 SMART SM00267 320 481 3.1E-6 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 Pfam PF05231 MASE1 22 321 5.9E-15 T 29-03-2018 IPR007895 MASE1 CPU03_RS03525 0b1133b0d959bd80492858d5f3e8054b 744 SUPERFAMILY SSF141868 498 736 2.88E-35 T 29-03-2018 IPR001633 EAL domain CPU03_RS03675 568779b63548a485e308ef96277196f7 217 SUPERFAMILY SSF55469 1 216 5.37E-64 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS03675 568779b63548a485e308ef96277196f7 217 Pfam PF00881 Nitroreductase family 8 193 1.4E-26 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CPU03_RS03675 568779b63548a485e308ef96277196f7 217 Gene3D G3DSA:3.40.109.10 1 217 8.1E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 29-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 SMART SM00882 5 216 2.7E-69 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 Pfam PF01144 Coenzyme A transferase 7 214 9.2E-69 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 SUPERFAMILY SSF100950 2 217 2.88E-74 T 29-03-2018 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 Gene3D G3DSA:3.40.1080.10 1 220 1.6E-72 T 29-03-2018 CPU03_RS14925 0e985d93e645bfa93adb2957273e5fa6 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 7 215 2.0E-64 T 29-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 Gene3D G3DSA:1.10.10.10 1 84 6.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 Pfam PF03466 LysR substrate binding domain 91 290 7.7E-42 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 SUPERFAMILY SSF53850 92 290 2.35E-38 T 29-03-2018 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 Gene3D G3DSA:3.40.190.10 87 174 1.4E-17 T 29-03-2018 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 Gene3D G3DSA:3.40.190.10 175 265 2.5E-19 T 29-03-2018 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 SUPERFAMILY SSF46785 3 110 6.16E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS11565 3cc93a5ba86ca478ed0d215f49512c9c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS01565 77d1ae208cf08cdfe13869c196aeda2e 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 8.0E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS01565 77d1ae208cf08cdfe13869c196aeda2e 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 8.0E-5 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS01565 77d1ae208cf08cdfe13869c196aeda2e 252 Pfam PF12697 Alpha/beta hydrolase family 26 243 1.4E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS01565 77d1ae208cf08cdfe13869c196aeda2e 252 SUPERFAMILY SSF53474 6 251 4.63E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS01565 77d1ae208cf08cdfe13869c196aeda2e 252 Gene3D G3DSA:3.40.50.1820 3 252 9.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 Gene3D G3DSA:3.30.420.40 134 233 1.7E-6 T 29-03-2018 CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 SUPERFAMILY SSF53067 5 106 5.18E-31 T 29-03-2018 CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 Gene3D G3DSA:3.30.420.40 1 133 7.9E-39 T 29-03-2018 CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 Pfam PF00814 Glycoprotease family 30 131 2.6E-29 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 3.9E-72 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CPU03_RS01335 00a4639aa223494cf938d439a2eec9b5 233 SUPERFAMILY SSF53067 110 219 1.55E-30 T 29-03-2018 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 SMART SM00388 248 316 9.5E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 Gene3D G3DSA:1.10.287.130 238 312 2.4E-12 T 29-03-2018 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 3.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 470 3.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 SMART SM00387 359 471 7.5E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 SUPERFAMILY SSF47384 231 312 2.75E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 SUPERFAMILY SSF55874 321 469 2.36E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 Gene3D G3DSA:3.30.565.10 317 471 1.3E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS04005 307d551cfa3b90c8e70aee0b15cb6f47 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 312 1.1E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 662 27.872 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 Pfam PF01266 FAD dependent oxidoreductase 268 637 2.0E-48 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 Gene3D G3DSA:3.50.50.60 254 682 7.6E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 242 1.1E-43 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 SUPERFAMILY SSF51905 268 544 6.34E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 SUPERFAMILY SSF53335 55 112 6.4E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 SUPERFAMILY SSF53335 140 242 6.4E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 Gene3D G3DSA:3.40.50.150 9 250 5.4E-83 T 29-03-2018 CPU03_RS13105 e7c75aed3e49f967dcf9c400ec1f3d4b 693 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 667 1.3E-144 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 SUPERFAMILY SSF54862 153 232 2.98E-17 T 29-03-2018 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 SUPERFAMILY SSF55124 21 83 2.29E-16 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 Pfam PF14697 4Fe-4S dicluster domain 176 224 1.7E-9 T 29-03-2018 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 SUPERFAMILY SSF56014 110 173 7.85E-31 T 29-03-2018 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 SUPERFAMILY SSF56014 232 329 7.85E-31 T 29-03-2018 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 25 82 3.6E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 Gene3D G3DSA:3.30.413.10 23 321 7.1E-33 T 29-03-2018 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 PRINTS PR00397 Sirohaem Fe-binding site signature 110 128 8.9E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 PRINTS PR00397 Sirohaem Fe-binding site signature 151 169 8.9E-8 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 4 321 5.8E-144 T 29-03-2018 IPR014261 Sulphite reductase, subunit C CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 110 303 2.0E-17 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CPU03_RS16500 88528170b132375594ccf1c67365c6d9 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 212 223 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 PIRSF PIRSF001237 4 348 1.2E-140 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 51.989 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 3.9E-148 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 Gene3D G3DSA:3.20.20.140 14 348 5.2E-50 T 29-03-2018 CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 Pfam PF01979 Amidohydrolase family 15 309 7.4E-18 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 SUPERFAMILY SSF51556 7 346 2.16E-142 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS14495 0365d95e6f0232ab4ec376a354d1d5db 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 29-03-2018 CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 Gene3D G3DSA:3.40.50.1000 2 266 5.6E-36 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 SUPERFAMILY SSF56784 1 265 4.96E-68 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 29-03-2018 CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 4.1E-62 T 29-03-2018 IPR000150 Cof family GO:0016787 CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 2.0E-61 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS08880 22215ca69c9a13aaeca33b3493aba24f 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 2.5E-25 T 29-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CPU03_RS14895 dba644591c9e910af29a9cebfa94105f 118 Gene3D G3DSA:3.40.50.2300 8 106 1.1E-35 T 29-03-2018 CPU03_RS14895 dba644591c9e910af29a9cebfa94105f 118 SUPERFAMILY SSF52794 9 103 2.79E-30 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS14895 dba644591c9e910af29a9cebfa94105f 118 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 11 97 4.8E-13 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS14895 dba644591c9e910af29a9cebfa94105f 118 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 10 91 6.5E-28 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CPU03_RS11380 bce05ca1779ef4515e517bbffd31000b 318 Pfam PF03547 Membrane transport protein 14 146 8.1E-8 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CPU03_RS11380 bce05ca1779ef4515e517bbffd31000b 318 Pfam PF03547 Membrane transport protein 167 307 7.8E-13 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 ProSitePatterns PS00893 Nudix box signature. 161 182 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 Pfam PF00293 NUDIX domain 134 246 1.3E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 SUPERFAMILY SSF55811 7 98 6.08E-27 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 Gene3D G3DSA:3.90.79.10 128 259 2.6E-35 T 29-03-2018 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 259 44.505 T 29-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 SUPERFAMILY SSF55811 81 243 5.55E-41 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS07050 915460e0bfcbde4e38c8ce341b3f6723 259 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 96 126 2.1E-10 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CPU03_RS12550 4dac6eb9431f561301b4ba6dc20830e6 520 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.4E-176 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS12550 4dac6eb9431f561301b4ba6dc20830e6 520 PIRSF PIRSF006446 1 336 2.1E-115 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS12550 4dac6eb9431f561301b4ba6dc20830e6 520 PIRSF PIRSF006446 351 518 1.0E-29 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CPU03_RS15525 334840bc1e97295388328d8894aaca2b 321 Gene3D G3DSA:3.40.50.1100 137 321 1.9E-53 T 29-03-2018 CPU03_RS15525 334840bc1e97295388328d8894aaca2b 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CPU03_RS15525 334840bc1e97295388328d8894aaca2b 321 Gene3D G3DSA:3.40.50.1100 19 136 6.8E-34 T 29-03-2018 CPU03_RS15525 334840bc1e97295388328d8894aaca2b 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 300 5.0E-64 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS15525 334840bc1e97295388328d8894aaca2b 321 SUPERFAMILY SSF53686 3 317 2.88E-90 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 8.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 39 52 8.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 8.3E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 34.999 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 192 2.1E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 SUPERFAMILY SSF56784 7 222 5.56E-62 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 Gene3D G3DSA:3.40.50.1000 83 223 9.1E-38 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 192 1.3E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 1.1E-75 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 187 8.0E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 Gene3D G3DSA:3.40.50.1000 5 36 0.047 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS09255 3d4e082a0b0bcf4a0f74c4611f0d8f39 228 Gene3D G3DSA:1.10.150.240 37 82 7.2E-21 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 Gene3D G3DSA:1.20.1250.20 261 493 0.006 T 29-03-2018 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 SUPERFAMILY SSF103473 4 212 8.24E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 SUPERFAMILY SSF103473 255 487 8.24E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 Pfam PF00854 POT family 77 440 7.1E-83 T 29-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 457 1.9E-79 T 29-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 29-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CPU03_RS04085 a28ee2582f93d95b6dbe2b5e8c3e9cc1 493 Gene3D G3DSA:1.20.1250.20 5 196 4.6E-26 T 29-03-2018 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 SUPERFAMILY SSF53649 36 55 7.71E-108 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 SUPERFAMILY SSF53649 82 424 7.71E-108 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 SUPERFAMILY SSF53649 460 517 7.71E-108 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 Gene3D G3DSA:3.40.720.10 35 442 8.8E-83 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 ProSitePatterns PS00149 Sulfatases signature 2. 154 164 - T 29-03-2018 IPR024607 Sulfatase, conserved site CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 ProSitePatterns PS00523 Sulfatases signature 1. 109 121 - T 29-03-2018 IPR024607 Sulfatase, conserved site CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 Gene3D G3DSA:3.30.1120.10 443 524 2.1E-13 T 29-03-2018 CPU03_RS12820 514f589a7347596c1a23d5db0c640e9d 538 Pfam PF00884 Sulfatase 37 387 7.9E-72 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS04530 cb903e3d8adb43ab5a90984631b59753 120 PIRSF PIRSF006287 1 120 8.6E-48 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CPU03_RS04530 cb903e3d8adb43ab5a90984631b59753 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 28.754 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CPU03_RS04530 cb903e3d8adb43ab5a90984631b59753 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 1.0E-43 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CPU03_RS04530 cb903e3d8adb43ab5a90984631b59753 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 2 117 2.6E-43 T 29-03-2018 IPR008249 Uncharacterised protein family UPF0231 CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 Gene3D G3DSA:1.10.357.10 83 195 8.0E-7 T 29-03-2018 CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 2.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 209 51.985 T 29-03-2018 IPR023764 Transcriptional repressor HTH, FabR CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 Gene3D G3DSA:1.10.10.60 2 47 4.6E-15 T 29-03-2018 CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 SUPERFAMILY SSF46689 2 77 2.58E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS07775 e6bb0a63833419d628f8a5711d8a38ea 225 Gene3D G3DSA:1.10.10.60 48 82 6.0E-7 T 29-03-2018 CPU03_RS05035 24fbef3a6d7a386151fc25cf16712788 230 SMART SM01144 27 219 1.0E-71 T 29-03-2018 IPR005636 DTW CPU03_RS05035 24fbef3a6d7a386151fc25cf16712788 230 Pfam PF03942 DTW domain 29 213 1.4E-39 T 29-03-2018 IPR005636 DTW CPU03_RS02400 dc54991696ab9d298fd51d25fdd4a791 400 Pfam PF01943 Polysaccharide biosynthesis protein 3 268 1.0E-17 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CPU03_RS17120 2f4186e709eec9d2e66e8d9b49dc6caa 591 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 297 541 2.5E-76 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CPU03_RS17120 2f4186e709eec9d2e66e8d9b49dc6caa 591 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 2 581 7.8E-155 T 29-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CPU03_RS14650 7db10635719bd829b24b9eeaa6d0e726 108 Gene3D G3DSA:3.30.780.10 16 106 5.6E-18 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CPU03_RS14650 7db10635719bd829b24b9eeaa6d0e726 108 SUPERFAMILY SSF55159 6 104 3.79E-24 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CPU03_RS14650 7db10635719bd829b24b9eeaa6d0e726 108 PIRSF PIRSF037511 1 108 1.4E-32 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CPU03_RS14650 7db10635719bd829b24b9eeaa6d0e726 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 7.4E-37 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CPU03_RS14650 7db10635719bd829b24b9eeaa6d0e726 108 Pfam PF01253 Translation initiation factor SUI1 32 101 3.3E-17 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 Gene3D G3DSA:2.40.30.70 5 148 6.2E-54 T 29-03-2018 IPR023370 TsaA-like domain CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 SUPERFAMILY SSF118196 1 229 4.32E-86 T 29-03-2018 IPR023370 TsaA-like domain CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 148 5.4E-57 T 29-03-2018 IPR023370 TsaA-like domain CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 Gene3D G3DSA:3.30.2310.10 149 230 4.6E-24 T 29-03-2018 CPU03_RS05100 91d86570bf7e9bccab931bb135c3c756 234 Pfam PF01980 Uncharacterised protein family UPF0066 21 141 3.0E-41 T 29-03-2018 IPR023370 TsaA-like domain CPU03_RS09955 3c680131f43b2f0988b8c0658440537f 128 Gene3D G3DSA:3.30.1330.40 2 127 1.5E-45 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CPU03_RS09955 3c680131f43b2f0988b8c0658440537f 128 SUPERFAMILY SSF55298 4 126 1.02E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CPU03_RS09955 3c680131f43b2f0988b8c0658440537f 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 29-03-2018 IPR019897 RidA, conserved site CPU03_RS09955 3c680131f43b2f0988b8c0658440537f 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 126 1.2E-53 T 29-03-2018 IPR006056 RidA family CPU03_RS09955 3c680131f43b2f0988b8c0658440537f 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 8.7E-45 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CPU03_RS12755 f10543a9898801e6dd3cf6f241fb11c6 299 SUPERFAMILY SSF103481 40 134 3.14E-12 T 29-03-2018 CPU03_RS12755 f10543a9898801e6dd3cf6f241fb11c6 299 Pfam PF00892 EamA-like transporter family 144 286 7.6E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS12755 f10543a9898801e6dd3cf6f241fb11c6 299 Pfam PF00892 EamA-like transporter family 7 131 2.0E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS12755 f10543a9898801e6dd3cf6f241fb11c6 299 SUPERFAMILY SSF103481 206 290 2.09E-6 T 29-03-2018 CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 SUPERFAMILY SSF50249 4 75 5.31E-14 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 SUPERFAMILY SSF57863 86 181 5.49E-9 T 29-03-2018 CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 Pfam PF11967 Recombination protein O N terminal 4 76 5.7E-23 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 Gene3D G3DSA:2.40.50.140 1 76 1.7E-25 T 29-03-2018 CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 Pfam PF02565 Recombination protein O C terminal 83 226 1.9E-23 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.284 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CPU03_RS11770 03b76a78bd5ab263359306d899670de8 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 7.9E-39 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CPU03_RS10145 49eb0bf2a861be28504d18687cc26498 426 Pfam PF02378 Phosphotransferase system, EIIC 23 344 2.6E-62 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CPU03_RS10145 49eb0bf2a861be28504d18687cc26498 426 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 10 420 9.5E-134 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CPU03_RS10145 49eb0bf2a861be28504d18687cc26498 426 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 10 420 9.5E-134 T 29-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CPU03_RS10145 49eb0bf2a861be28504d18687cc26498 426 PIRSF PIRSF006351 1 425 1.1E-137 T 29-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 SUPERFAMILY SSF51569 1 292 1.57E-69 T 29-03-2018 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 SMART SM01130 3 294 2.5E-60 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 PIRSF PIRSF001365 1 296 9.8E-66 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 Pfam PF00701 Dihydrodipicolinate synthetase family 4 292 7.1E-49 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 8.3E-5 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 8.3E-5 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CPU03_RS03620 f43924d07261dc66983d47ef3db7f045 296 Gene3D G3DSA:3.20.20.70 1 295 7.0E-70 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS15155 a7a20e90e39437bce11bbfb92ac32ea5 342 SUPERFAMILY SSF81345 4 337 2.09E-80 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS15155 a7a20e90e39437bce11bbfb92ac32ea5 342 Pfam PF01032 FecCD transport family 23 337 2.4E-87 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CPU03_RS15155 a7a20e90e39437bce11bbfb92ac32ea5 342 Gene3D G3DSA:1.10.3470.10 7 342 5.8E-76 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 6.4E-62 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 254 1.8E-92 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 498 2.0E-230 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 Hamap MF_00186 Glycerol kinase [glpK]. 5 499 60.112 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 SUPERFAMILY SSF53067 6 257 1.4E-95 T 29-03-2018 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 PIRSF PIRSF000538 5 502 3.0E-180 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 SUPERFAMILY SSF53067 257 498 2.91E-86 T 29-03-2018 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 Gene3D G3DSA:3.30.420.40 1 250 1.3E-87 T 29-03-2018 CPU03_RS08465 d218dd08b78485b6f1bd594a8671568d 502 Gene3D G3DSA:3.30.420.40 251 502 1.8E-79 T 29-03-2018 CPU03_RS16865 da13e608f0d87bba188d4dd80ec7ee7f 139 Gene3D G3DSA:1.10.443.10 10 127 7.6E-17 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS16865 da13e608f0d87bba188d4dd80ec7ee7f 139 SUPERFAMILY SSF56349 41 110 3.53E-17 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS16865 da13e608f0d87bba188d4dd80ec7ee7f 139 Pfam PF00589 Phage integrase family 16 110 2.5E-23 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 SUPERFAMILY SSF56317 3 242 1.57E-63 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 Gene3D G3DSA:3.40.50.620 261 539 5.4E-64 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 242 6.4E-27 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 PIRSF PIRSF006630 2 256 6.0E-78 T 29-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 PIRSF PIRSF006630 241 539 2.6E-121 T 29-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 29-03-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 SUPERFAMILY SSF52402 259 520 1.48E-77 T 29-03-2018 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 Pfam PF02540 NAD synthase 264 512 7.3E-72 T 29-03-2018 IPR022310 NAD/GMP synthase CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 Gene3D G3DSA:3.60.110.10 1 245 2.6E-62 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS03990 cf0e4ab7e036861ae4c3403f669a3ce4 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 270 511 1.3E-60 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CPU03_RS05110 7f4447f41167ccbcb3944ce82b8eb2e7 162 Pfam PF05981 CreA protein 25 156 2.6E-58 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CPU03_RS05110 7f4447f41167ccbcb3944ce82b8eb2e7 162 PIRSF PIRSF003174 2 162 8.2E-70 T 29-03-2018 IPR010292 Uncharacterised protein family CreA CPU03_RS16120 4e824a60a508d9500c3156eaf2602609 347 Gene3D G3DSA:1.20.1630.10 6 299 2.5E-36 T 29-03-2018 CPU03_RS16120 4e824a60a508d9500c3156eaf2602609 347 Pfam PF03916 Polysulphide reductase, NrfD 9 293 3.4E-14 T 29-03-2018 IPR005614 NrfD family CPU03_RS06520 3aa7b6816bc6c15851ec3c1c3abcf043 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 1.1E-10 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane CPU03_RS06520 3aa7b6816bc6c15851ec3c1c3abcf043 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 3.3E-8 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane CPU03_RS05920 79e2dcfabf9fe7fe24d18feb2ac4dd3b 95 Pfam PF13997 YqjK-like protein 15 87 6.0E-18 T 29-03-2018 IPR025612 YqjK-like protein CPU03_RS00425 40e18c7f5620e383e25043fb6be2186d 355 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 58 342 1.2E-128 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 CPU03_RS00425 40e18c7f5620e383e25043fb6be2186d 355 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 349 37.801 T 29-03-2018 IPR006507 Uncharacterised protein family UPF0283 CPU03_RS00425 40e18c7f5620e383e25043fb6be2186d 355 Pfam PF05128 Domain of unknown function (DUF697) 184 344 7.6E-55 T 29-03-2018 IPR021147 Protein of unknown function DUF697 CPU03_RS15370 9e0057bc72b26f97bb83ed6e48e312a5 131 SUPERFAMILY SSF55331 2 125 1.92E-41 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily CPU03_RS15370 9e0057bc72b26f97bb83ed6e48e312a5 131 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 8.3E-22 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 CPU03_RS15370 9e0057bc72b26f97bb83ed6e48e312a5 131 Gene3D G3DSA:3.30.429.10 1 126 2.4E-43 T 29-03-2018 CPU03_RS10070 621eb0a1a2797bada7ad22a08e399d10 306 SUPERFAMILY SSF141523 93 149 1.83E-26 T 29-03-2018 CPU03_RS10070 621eb0a1a2797bada7ad22a08e399d10 306 SUPERFAMILY SSF141523 177 233 1.83E-26 T 29-03-2018 CPU03_RS10070 621eb0a1a2797bada7ad22a08e399d10 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 1.2E-16 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CPU03_RS10070 621eb0a1a2797bada7ad22a08e399d10 306 Gene3D G3DSA:2.40.440.10 92 233 1.9E-28 T 29-03-2018 CPU03_RS10070 621eb0a1a2797bada7ad22a08e399d10 306 Gene3D G3DSA:3.10.350.10 45 89 1.3E-4 T 29-03-2018 CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 Gene3D G3DSA:3.40.50.300 840 1023 1.3E-16 T 29-03-2018 CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 SUPERFAMILY SSF56024 1037 1195 4.29E-11 T 29-03-2018 CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 SUPERFAMILY SSF52540 263 386 2.8E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 SUPERFAMILY SSF52540 699 791 2.8E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 SUPERFAMILY SSF52540 825 1047 2.8E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 Gene3D G3DSA:3.30.870.10 1024 1198 5.6E-9 T 29-03-2018 CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 Gene3D G3DSA:3.40.50.300 262 839 1.9E-19 T 29-03-2018 CPU03_RS02330 8ddfc073bee280c4d5338c9b2fc57013 1200 Pfam PF13087 AAA domain 829 1000 1.4E-19 T 29-03-2018 CPU03_RS12895 290da42186a0b31c63ac458b915fb69d 65 Pfam PF04328 Selenoprotein, putative 5 65 1.8E-29 T 29-03-2018 IPR007423 Selenoprotein, putative CPU03_RS07615 172da0a146f6163f98456f35b087974d 323 Gene3D G3DSA:3.20.20.370 2 323 5.7E-29 T 29-03-2018 CPU03_RS07615 172da0a146f6163f98456f35b087974d 323 SUPERFAMILY SSF88713 29 257 5.28E-11 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CPU03_RS11320 936d8f0f81750e326a06d8c0d85921cd 66 SUPERFAMILY SSF140319 3 64 7.06E-25 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CPU03_RS11320 936d8f0f81750e326a06d8c0d85921cd 66 PIRSF PIRSF039003 3 66 1.8E-31 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CPU03_RS11320 936d8f0f81750e326a06d8c0d85921cd 66 Gene3D G3DSA:1.10.10.600 2 64 4.8E-32 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CPU03_RS11320 936d8f0f81750e326a06d8c0d85921cd 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.0E-30 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CPU03_RS11320 936d8f0f81750e326a06d8c0d85921cd 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 9.1E-31 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 Pfam PF12833 Helix-turn-helix domain 169 245 6.2E-13 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 SMART SM00342 162 244 1.4E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 Gene3D G3DSA:1.10.10.60 194 252 7.0E-12 T 29-03-2018 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 Gene3D G3DSA:1.10.10.60 140 193 0.016 T 29-03-2018 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 SUPERFAMILY SSF46689 197 248 2.69E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 1.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS08590 e672990bce3f401b79706a1ed8edb7cb 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 1.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 Gene3D G3DSA:3.30.70.20 48 79 7.7E-15 T 29-03-2018 CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 Pfam PF12838 4Fe-4S dicluster domain 39 89 5.7E-13 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 Gene3D G3DSA:3.30.70.20 80 168 3.5E-6 T 29-03-2018 CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 Gene3D G3DSA:3.30.70.20 19 47 7.3E-7 T 29-03-2018 CPU03_RS10860 0a20d54aea8817c61b3b1a70a8623cc5 185 SUPERFAMILY SSF54862 18 119 1.0E-20 T 29-03-2018 CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 PIRSF PIRSF000495 5 201 6.9E-64 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 Pfam PF00117 Glutamine amidotransferase class-I 9 197 2.8E-18 T 29-03-2018 IPR017926 Glutamine amidotransferase CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 SUPERFAMILY SSF52317 7 199 5.35E-55 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 Gene3D G3DSA:3.40.50.880 2 200 6.5E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 199 2.7E-68 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CPU03_RS13800 fdb19a5c5dc0b59ca0912744aa2bf9a9 201 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 199 33.292 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Gene3D G3DSA:3.40.50.980 5 176 3.7E-41 T 29-03-2018 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Gene3D G3DSA:3.40.50.980 177 327 4.5E-33 T 29-03-2018 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 503 5.4E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Gene3D G3DSA:3.30.300.30 414 511 8.1E-26 T 29-03-2018 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Pfam PF00501 AMP-binding enzyme 14 419 1.0E-88 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 Gene3D G3DSA:2.30.38.10 328 412 6.5E-26 T 29-03-2018 CPU03_RS12145 a2c46dec33bd41c7ef2e022d81bd1d98 514 SUPERFAMILY SSF56801 7 510 1.83E-140 T 29-03-2018 CPU03_RS02390 79750ce46acf60879ab6b82baffe3361 354 Pfam PF14307 Glycosyltransferase WbsX 10 344 2.2E-98 T 29-03-2018 IPR032719 Glycosyltransferase WbsX CPU03_RS08520 b3a70ac7deb93c0e77c75382a7a01987 87 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 4 84 9.0E-30 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS08520 b3a70ac7deb93c0e77c75382a7a01987 87 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 43 59 1.1E-12 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS08520 b3a70ac7deb93c0e77c75382a7a01987 87 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 61 76 1.1E-12 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS08520 b3a70ac7deb93c0e77c75382a7a01987 87 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 23 38 1.1E-12 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS12155 1a4259021ae22b2a689680aca9696fdf 203 SUPERFAMILY SSF53955 38 201 2.05E-28 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS12155 1a4259021ae22b2a689680aca9696fdf 203 Gene3D G3DSA:1.10.530.10 28 203 1.3E-31 T 29-03-2018 CPU03_RS12155 1a4259021ae22b2a689680aca9696fdf 203 Pfam PF01464 Transglycosylase SLT domain 42 166 7.5E-27 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS12155 1a4259021ae22b2a689680aca9696fdf 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS00005 577e58cee76f1171477a9a72f281239a 118 Gene3D G3DSA:3.20.20.450 1 114 2.5E-19 T 29-03-2018 IPR001633 EAL domain CPU03_RS00005 577e58cee76f1171477a9a72f281239a 118 Pfam PF00563 EAL domain 2 94 7.4E-16 T 29-03-2018 IPR001633 EAL domain CPU03_RS00005 577e58cee76f1171477a9a72f281239a 118 SUPERFAMILY SSF141868 2 101 4.58E-19 T 29-03-2018 IPR001633 EAL domain CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 PRINTS PR01369 Intimin signature 483 495 1.5E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 PRINTS PR01369 Intimin signature 327 346 1.5E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 PRINTS PR01369 Intimin signature 299 314 1.5E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 PRINTS PR01369 Intimin signature 395 414 1.5E-15 T 29-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 Pfam PF02369 Bacterial Ig-like domain (group 1) 570 657 1.5E-11 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 Gene3D G3DSA:3.10.350.10 84 159 5.8E-5 T 29-03-2018 CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 SMART SM00634 572 660 2.2E-16 T 29-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 Pfam PF11924 Inverse autotransporter, beta-domain 176 447 7.4E-107 T 29-03-2018 IPR024519 Inverse autotransporter, beta-domain CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 SMART SM00257 90 138 0.0028 T 29-03-2018 IPR018392 LysM domain CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 SUPERFAMILY SSF49373 571 664 3.73E-38 T 29-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 Gene3D G3DSA:2.60.120.260 442 606 3.7E-16 T 29-03-2018 IPR008979 Galactose-binding domain-like CPU03_RS10190 40f214a18184a4abc5053fcb5973021c 750 Gene3D G3DSA:2.60.40.1120 607 676 4.8E-5 T 29-03-2018 CPU03_RS11525 83601b1732ee07a96c478f38d44479b7 229 Gene3D G3DSA:3.40.50.300 5 229 1.1E-59 T 29-03-2018 CPU03_RS11525 83601b1732ee07a96c478f38d44479b7 229 SMART SM00382 36 221 2.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11525 83601b1732ee07a96c478f38d44479b7 229 Pfam PF00005 ABC transporter 27 171 1.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS11525 83601b1732ee07a96c478f38d44479b7 229 SUPERFAMILY SSF52540 8 223 1.09E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11525 83601b1732ee07a96c478f38d44479b7 229 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 Pfam PF12833 Helix-turn-helix domain 27 105 2.3E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 SMART SM00342 21 104 3.2E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 Gene3D G3DSA:1.10.10.60 61 115 2.9E-10 T 29-03-2018 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 Gene3D G3DSA:1.10.10.60 3 60 1.7E-12 T 29-03-2018 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 SUPERFAMILY SSF46689 5 55 7.56E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 SUPERFAMILY SSF46689 58 108 1.25E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 5.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS13580 2532db72d1992650cc6afb8398c01067 117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 5.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 Gene3D G3DSA:3.40.1030.10 83 337 2.7E-92 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 Pfam PF00591 Glycosyl transferase family, a/b domain 79 328 3.4E-97 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 12 335 2.8E-128 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 SUPERFAMILY SSF52418 76 334 2.88E-91 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 70 1.0E-15 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 Gene3D G3DSA:1.20.970.10 2 82 1.1E-17 T 29-03-2018 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 9 337 38.973 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CPU03_RS00925 909dd7dcd3af44ee5cf424937c284863 338 SUPERFAMILY SSF47648 8 74 3.01E-17 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CPU03_RS02055 968d13cdf8ac5c8ed004d92af5f83146 712 Pfam PF13515 Fusaric acid resistance protein-like 410 529 1.7E-25 T 29-03-2018 CPU03_RS02055 968d13cdf8ac5c8ed004d92af5f83146 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 709 1.7E-279 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CPU03_RS02055 968d13cdf8ac5c8ed004d92af5f83146 712 Pfam PF12805 FUSC-like inner membrane protein yccS 71 350 6.4E-107 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CPU03_RS02055 968d13cdf8ac5c8ed004d92af5f83146 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 709 0.0 T 29-03-2018 IPR010019 Integral membrane protein, YccS CPU03_RS06830 505dfb978c1612788af9e2e3c32d0bec 298 Gene3D G3DSA:3.20.20.360 1 265 7.4E-51 T 29-03-2018 CPU03_RS06830 505dfb978c1612788af9e2e3c32d0bec 298 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 295 2.4E-136 T 29-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CPU03_RS06830 505dfb978c1612788af9e2e3c32d0bec 298 SUPERFAMILY SSF51621 7 240 3.49E-62 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS06830 505dfb978c1612788af9e2e3c32d0bec 298 PIRSF PIRSF015582 2 298 4.8E-77 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like CPU03_RS06830 505dfb978c1612788af9e2e3c32d0bec 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 4.1E-82 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CPU03_RS08005 2e243de6e5c930c04d3064935aa2eb4f 295 Gene3D G3DSA:3.40.50.2300 132 295 2.2E-46 T 29-03-2018 CPU03_RS08005 2e243de6e5c930c04d3064935aa2eb4f 295 Gene3D G3DSA:3.40.50.2300 27 131 8.9E-27 T 29-03-2018 CPU03_RS08005 2e243de6e5c930c04d3064935aa2eb4f 295 SUPERFAMILY SSF53822 27 295 1.23E-87 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS08005 2e243de6e5c930c04d3064935aa2eb4f 295 Pfam PF13407 Periplasmic binding protein domain 29 281 5.7E-58 T 29-03-2018 IPR025997 Periplasmic binding protein CPU03_RS10575 01f5b2d293ebe47f899aac99b38a8524 219 Gene3D G3DSA:3.40.50.10420 3 205 3.0E-58 T 29-03-2018 CPU03_RS10575 01f5b2d293ebe47f899aac99b38a8524 219 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 196 8.8E-54 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CPU03_RS10575 01f5b2d293ebe47f899aac99b38a8524 219 PIRSF PIRSF006806 6 199 1.9E-31 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CPU03_RS10575 01f5b2d293ebe47f899aac99b38a8524 219 SUPERFAMILY SSF100950 9 204 1.53E-57 T 29-03-2018 CPU03_RS10575 01f5b2d293ebe47f899aac99b38a8524 219 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 196 1.1E-41 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CPU03_RS13020 f20721430a7a31f4b6e1e7586c98ba7f 77 Pfam PF04995 Heme exporter protein D (CcmD) 15 57 1.4E-18 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CPU03_RS13020 f20721430a7a31f4b6e1e7586c98ba7f 77 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 3.9E-20 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CPU03_RS13885 8a3bed03148ca29a44e9478819ede897 159 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 4.0E-32 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CPU03_RS13495 21b438eaa35dd314b7aa51187c63c31e 194 Gene3D G3DSA:3.40.50.360 3 193 3.7E-35 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS13495 21b438eaa35dd314b7aa51187c63c31e 194 SUPERFAMILY SSF52218 1 189 8.52E-45 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS13495 21b438eaa35dd314b7aa51187c63c31e 194 Pfam PF03358 NADPH-dependent FMN reductase 51 107 4.4E-9 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CPU03_RS05325 2a789aae1e48c90f2d39271701d5220f 276 SUPERFAMILY SSF52540 8 236 2.37E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05325 2a789aae1e48c90f2d39271701d5220f 276 Pfam PF00005 ABC transporter 25 172 7.7E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS05325 2a789aae1e48c90f2d39271701d5220f 276 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS05325 2a789aae1e48c90f2d39271701d5220f 276 Gene3D G3DSA:3.40.50.300 5 273 1.6E-61 T 29-03-2018 CPU03_RS05325 2a789aae1e48c90f2d39271701d5220f 276 SMART SM00382 33 229 1.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 4.4E-84 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.1E-88 T 29-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 Gene3D G3DSA:3.30.1360.60 399 474 1.5E-27 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 SUPERFAMILY SSF55604 401 474 7.45E-21 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 1.4E-13 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 1.5E-26 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 6.6E-229 T 29-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 CPU03_RS14625 0195bc41a594cbdb5b42bdaf1e58c3f3 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CPU03_RS11890 3c7d4600a8a1bef6c08dd74d0394992b 70 Pfam PF13275 S4 domain 9 68 1.7E-24 T 29-03-2018 CPU03_RS11890 3c7d4600a8a1bef6c08dd74d0394992b 70 Gene3D G3DSA:3.10.290.10 1 70 1.1E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS11890 3c7d4600a8a1bef6c08dd74d0394992b 70 SUPERFAMILY SSF55174 5 68 1.96E-19 T 29-03-2018 CPU03_RS11095 de248fa6b3e8100acb11d69617275d6d 262 Pfam PF01578 Cytochrome C assembly protein 38 258 1.1E-39 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CPU03_RS03965 d01ce8e78e60ad1c2a97de01222b7182 348 Gene3D G3DSA:3.10.520.10 42 332 3.5E-62 T 29-03-2018 CPU03_RS03965 d01ce8e78e60ad1c2a97de01222b7182 348 SUPERFAMILY SSF143631 35 343 1.78E-101 T 29-03-2018 IPR003374 ApbE-like domain CPU03_RS03965 d01ce8e78e60ad1c2a97de01222b7182 348 PIRSF PIRSF006268 8 345 2.5E-92 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CPU03_RS03965 d01ce8e78e60ad1c2a97de01222b7182 348 Pfam PF02424 ApbE family 40 321 2.0E-86 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CPU03_RS03435 d0fb665ce240b2ea323f4d6b549f24f6 166 PIRSF PIRSF006162 9 165 3.5E-55 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CPU03_RS03435 d0fb665ce240b2ea323f4d6b549f24f6 166 Pfam PF04608 Phosphatidylglycerophosphatase A 20 159 3.4E-52 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CPU03_RS03435 d0fb665ce240b2ea323f4d6b549f24f6 166 SUPERFAMILY SSF101307 13 160 1.44E-47 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CPU03_RS03435 d0fb665ce240b2ea323f4d6b549f24f6 166 Gene3D G3DSA:1.10.3760.10 48 163 5.7E-39 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CPU03_RS15745 53ab2bfcac8c435bf44133517b0808b9 73 Gene3D G3DSA:3.30.2020.10 1 63 2.8E-5 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS15745 53ab2bfcac8c435bf44133517b0808b9 73 SUPERFAMILY SSF143880 1 46 7.19E-6 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS04760 c13ff3b7dd2d4527ec8cb0236c51bb6e 200 Gene3D G3DSA:3.20.19.10 1 176 2.0E-47 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS04760 c13ff3b7dd2d4527ec8cb0236c51bb6e 200 SUPERFAMILY SSF52016 4 197 2.16E-58 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CPU03_RS04760 c13ff3b7dd2d4527ec8cb0236c51bb6e 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 2.0E-89 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CPU03_RS04760 c13ff3b7dd2d4527ec8cb0236c51bb6e 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.8E-36 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CPU03_RS04760 c13ff3b7dd2d4527ec8cb0236c51bb6e 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.654 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CPU03_RS16495 11dc090499d23c12a68d7b45d448ea14 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 1.1E-30 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CPU03_RS16495 11dc090499d23c12a68d7b45d448ea14 98 Gene3D G3DSA:3.30.70.860 15 96 9.0E-27 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain CPU03_RS16495 11dc090499d23c12a68d7b45d448ea14 98 Pfam PF04175 Protein of unknown function (DUF406) 5 96 1.8E-32 T 29-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 36 115 5.3E-19 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:3.40.50.720 120 221 6.6E-19 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 148 4.5E-20 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 275 4.5E-20 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 364 4.5E-20 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 398 4.5E-20 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:3.30.70.20 522 545 4.4E-5 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:3.30.70.20 480 521 2.0E-6 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 521 532 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 SUPERFAMILY SSF46548 410 538 3.45E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Pfam PF00037 4Fe-4S binding domain 515 537 4.3E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 SUPERFAMILY SSF46548 34 136 1.1E-21 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:3.50.50.60 268 445 2.7E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:1.10.1060.10 24 119 3.2E-25 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 127 410 3.4E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 SUPERFAMILY SSF51971 126 357 7.06E-54 T 29-03-2018 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 150 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 386 404 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 277 1.9E-12 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CPU03_RS12930 c58810df38181f02cec4bfc635f9b8fd 545 Gene3D G3DSA:3.50.50.60 222 267 3.6E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS13180 9290e4d86fde85ed9f9e99561b95e2ab 281 Hamap MF_02022 Cell division protein DedD [dedD]. 10 280 25.072 T 29-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 CPU03_RS13180 9290e4d86fde85ed9f9e99561b95e2ab 281 Pfam PF05036 Sporulation related domain 203 276 7.4E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS13180 9290e4d86fde85ed9f9e99561b95e2ab 281 Gene3D G3DSA:3.30.70.1070 198 276 1.1E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS13180 9290e4d86fde85ed9f9e99561b95e2ab 281 SUPERFAMILY SSF110997 203 276 4.05E-12 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS07695 4b532ff1280fdadff9ecabcd1442b907 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.7E-130 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CPU03_RS07695 4b532ff1280fdadff9ecabcd1442b907 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.0E-42 T 29-03-2018 IPR013527 YicC-like, N-terminal CPU03_RS07695 4b532ff1280fdadff9ecabcd1442b907 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.1E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 CPU03_RS12565 728652e6d0e7a3272402ca28fb8c3320 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 6 97 9.7E-40 T 29-03-2018 IPR011846 Cyd operon protein YbgE CPU03_RS12565 728652e6d0e7a3272402ca28fb8c3320 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 92 7.7E-33 T 29-03-2018 IPR011846 Cyd operon protein YbgE CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 3.5E-171 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 Gene3D G3DSA:3.40.50.2000 10 261 7.5E-12 T 29-03-2018 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.23 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 Pfam PF08323 Starch synthase catalytic domain 3 233 1.7E-70 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 Pfam PF00534 Glycosyl transferases group 1 290 439 5.3E-14 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 SUPERFAMILY SSF53756 3 476 3.84E-117 T 29-03-2018 CPU03_RS09035 c28af50484b2f6b62abfd04e8bd11a17 476 Gene3D G3DSA:3.40.50.2000 262 472 9.0E-36 T 29-03-2018 CPU03_RS05745 1fdff407ebc1f440933fdaaa531302f9 76 Pfam PF10809 Protein of unknown function (DUF2732) 6 70 5.6E-12 T 29-03-2018 IPR020126 Protein of unknown function DUF2732 CPU03_RS17035 5860d8c09950a99b8617f69eb3143e7c 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 289 2.0E-22 T 29-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CPU03_RS17035 5860d8c09950a99b8617f69eb3143e7c 339 Pfam PF01548 Transposase 6 144 4.3E-10 T 29-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 7.0E-31 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 SUPERFAMILY SSF111148 1 89 4.84E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 PIRSF PIRSF029827 1 90 3.1E-43 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.0E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.194 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06665 920de7323a26ea98c0af091947b22187 90 Gene3D G3DSA:1.10.3880.10 2 89 1.4E-40 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CPU03_RS06745 570e56bfa7846354f9b742bf30c2a9cc 210 Gene3D G3DSA:2.40.160.20 25 210 6.1E-29 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS06745 570e56bfa7846354f9b742bf30c2a9cc 210 Pfam PF13505 Outer membrane protein beta-barrel domain 13 210 1.3E-21 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel CPU03_RS06745 570e56bfa7846354f9b742bf30c2a9cc 210 SUPERFAMILY SSF56925 26 210 3.4E-27 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 100 117 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 SUPERFAMILY SSF49354 22 150 6.28E-34 T 29-03-2018 IPR008962 PapD-like CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 232 1.6E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 SUPERFAMILY SSF49584 144 234 1.2E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 Gene3D G3DSA:2.60.40.10 154 238 4.3E-14 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 PRINTS PR00969 Pili chaperone signature 26 35 7.4E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 PRINTS PR00969 Pili chaperone signature 101 118 7.4E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 PRINTS PR00969 Pili chaperone signature 169 184 7.4E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 PRINTS PR00969 Pili chaperone signature 72 93 7.4E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 PRINTS PR00969 Pili chaperone signature 132 147 7.4E-32 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 Gene3D G3DSA:2.60.40.10 26 148 4.2E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS14030 27d27235b4f64699d5201c8c90eb77d4 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 150 7.2E-35 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 333 349 - T 29-03-2018 IPR013793 Porin, Gram-negative type, conserved site CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 Pfam PF00267 Gram-negative porin 27 381 2.6E-147 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 SUPERFAMILY SSF56935 22 381 1.13E-84 T 29-03-2018 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 7.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 245 257 7.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 7.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 7.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 333 350 7.4E-18 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 Gene3D G3DSA:2.40.160.10 32 381 1.3E-55 T 29-03-2018 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 280 299 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS16845 303c83240960407dab8eda4261ca577f 381 PRINTS PR00183 E.coli/Salmonella-type porin signature 251 268 5.1E-72 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS10305 83fc1798877e60c789e4b91ffa7ae2da 407 Gene3D G3DSA:1.20.1250.20 5 203 6.7E-22 T 29-03-2018 CPU03_RS10305 83fc1798877e60c789e4b91ffa7ae2da 407 Gene3D G3DSA:1.20.1250.20 204 396 1.5E-18 T 29-03-2018 CPU03_RS10305 83fc1798877e60c789e4b91ffa7ae2da 407 SUPERFAMILY SSF103473 4 393 6.28E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10305 83fc1798877e60c789e4b91ffa7ae2da 407 Pfam PF07690 Major Facilitator Superfamily 23 234 1.5E-15 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS07310 d3dc936d214b5399f055eb12ff10f886 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 443 1.2E-160 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS07310 d3dc936d214b5399f055eb12ff10f886 445 PIRSF PIRSF002746 1 445 9.0E-150 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS07310 d3dc936d214b5399f055eb12ff10f886 445 Pfam PF02447 GntP family permease 5 442 1.9E-155 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS02440 507990e85379633aaccbe8983740381a 311 SUPERFAMILY SSF103481 191 293 7.59E-12 T 29-03-2018 CPU03_RS02440 507990e85379633aaccbe8983740381a 311 SUPERFAMILY SSF103481 47 148 1.7E-7 T 29-03-2018 CPU03_RS02440 507990e85379633aaccbe8983740381a 311 Pfam PF00892 EamA-like transporter family 7 145 7.6E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS02440 507990e85379633aaccbe8983740381a 311 Pfam PF00892 EamA-like transporter family 158 290 1.0E-21 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 Gene3D G3DSA:3.40.190.10 179 266 3.6E-23 T 29-03-2018 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 Pfam PF03466 LysR substrate binding domain 89 289 1.8E-43 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 Gene3D G3DSA:3.40.190.10 92 178 3.9E-18 T 29-03-2018 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 SUPERFAMILY SSF46785 1 85 1.21E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 SUPERFAMILY SSF53850 90 292 7.67E-41 T 29-03-2018 CPU03_RS09790 06526793e23a67c2bd90f68472e55210 315 Gene3D G3DSA:1.10.10.10 1 91 2.2E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14430 814a85fc211c913f926c17d351431810 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 4.9E-29 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS14430 814a85fc211c913f926c17d351431810 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 4.7E-28 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS14430 814a85fc211c913f926c17d351431810 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 5.1E-18 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS14430 814a85fc211c913f926c17d351431810 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 5.1E-18 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS14430 814a85fc211c913f926c17d351431810 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 5.1E-18 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS14430 814a85fc211c913f926c17d351431810 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 104 17.759 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 Gene3D G3DSA:3.40.140.10 138 274 3.7E-43 T 29-03-2018 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 Gene3D G3DSA:3.10.20.10 37 123 3.1E-23 T 29-03-2018 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 Pfam PF02634 FdhD/NarQ family 36 271 6.3E-72 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 PIRSF PIRSF015626 4 274 5.4E-82 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 SUPERFAMILY SSF53927 18 271 1.8E-80 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 271 3.5E-88 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CPU03_RS08905 0da01df499e283633a917ab28ecc4852 274 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 10 272 33.227 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.8E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 152 26.7 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 Gene3D G3DSA:3.30.70.20 104 168 2.2E-7 T 29-03-2018 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 Gene3D G3DSA:3.30.70.20 71 103 6.2E-14 T 29-03-2018 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.1E-50 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 SUPERFAMILY SSF54862 33 155 5.02E-28 T 29-03-2018 CPU03_RS13340 b83579c2c8321fea0c8ffcbdbc691721 180 Gene3D G3DSA:3.30.70.20 22 70 2.3E-6 T 29-03-2018 CPU03_RS09570 c1a8727e11e6c5d83e192c4145502681 190 Pfam PF01300 Telomere recombination 16 190 2.3E-41 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 CPU03_RS09570 c1a8727e11e6c5d83e192c4145502681 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.821 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CPU03_RS09570 c1a8727e11e6c5d83e192c4145502681 190 SUPERFAMILY SSF55821 4 187 7.32E-55 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS09570 c1a8727e11e6c5d83e192c4145502681 190 Gene3D G3DSA:3.90.870.10 1 188 3.3E-52 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 SUPERFAMILY SSF118215 9 399 3.4E-76 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 Gene3D G3DSA:1.10.3860.10 1 404 6.2E-76 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 Pfam PF00375 Sodium:dicarboxylate symporter family 11 399 5.7E-88 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.7E-11 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 PRINTS PR00173 Glutamate-aspartate symporter signature 291 317 3.7E-11 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 PRINTS PR00173 Glutamate-aspartate symporter signature 142 164 3.7E-11 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS06915 84d3fad3937890a65397e41d797d1fa5 415 PRINTS PR00173 Glutamate-aspartate symporter signature 189 208 3.7E-11 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CPU03_RS09515 a0ca8ae5baf17cc004688716fe531331 124 Pfam PF09350 Domain of unknown function (DUF1992) 7 74 1.2E-23 T 29-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 SMART SM00729 147 367 1.4E-63 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.042 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.4E-209 T 29-03-2018 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 Pfam PF04055 Radical SAM superfamily 151 325 4.3E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 Gene3D G3DSA:3.80.30.20 144 381 1.7E-53 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 SUPERFAMILY SSF102114 126 375 3.92E-63 T 29-03-2018 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.9E-28 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.7E-155 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CPU03_RS12305 168c5c321647a766d0a00e64d22f003c 474 Pfam PF01938 TRAM domain 378 440 9.3E-19 T 29-03-2018 IPR002792 TRAM domain CPU03_RS13555 9342c502218763f2c0c93adf1ba6b29e 379 Pfam PF12698 ABC-2 family transporter protein 30 371 2.3E-41 T 29-03-2018 CPU03_RS13555 9342c502218763f2c0c93adf1ba6b29e 379 Gene3D G3DSA:3.40.1710.10 47 198 1.9E-24 T 29-03-2018 CPU03_RS16215 9b82a84073bbbbfc48cfe232ebbf7fe9 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 379 5.8E-108 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CPU03_RS16215 9b82a84073bbbbfc48cfe232ebbf7fe9 405 Pfam PF07690 Major Facilitator Superfamily 14 348 2.8E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS16215 9b82a84073bbbbfc48cfe232ebbf7fe9 405 Gene3D G3DSA:1.20.1250.20 184 403 5.7E-16 T 29-03-2018 CPU03_RS16215 9b82a84073bbbbfc48cfe232ebbf7fe9 405 SUPERFAMILY SSF103473 7 380 4.71E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16215 9b82a84073bbbbfc48cfe232ebbf7fe9 405 Gene3D G3DSA:1.20.1250.20 2 183 7.9E-29 T 29-03-2018 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 SUPERFAMILY SSF54211 228 483 6.37E-100 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 Pfam PF00183 Hsp90 protein 217 621 5.0E-127 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PIRSF PIRSF002583 1 623 2.7E-219 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 622 33.072 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 SUPERFAMILY SSF55874 4 212 6.02E-66 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 SMART SM00387 27 184 9.6E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 3.6E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 SUPERFAMILY SSF110942 509 621 7.72E-35 T 29-03-2018 CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 120 142 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 172 189 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 75 92 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 5 25 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 26 48 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 93 110 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 PRINTS PR00775 90kDa heat shock protein signature 190 208 7.6E-65 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CPU03_RS03190 fbd2eb4be970efea3781acef3d05c504 623 Gene3D G3DSA:3.30.565.10 29 222 3.9E-52 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS17040 6923ee19a00bfca3759b41fc4a92e229 303 Pfam PF03515 Colicin-like bacteriocin tRNase domain 50 292 4.0E-47 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 CPU03_RS17040 6923ee19a00bfca3759b41fc4a92e229 303 PRINTS PR01295 Cloacin signature 216 235 1.6E-8 T 29-03-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 CPU03_RS17040 6923ee19a00bfca3759b41fc4a92e229 303 PRINTS PR01295 Cloacin signature 124 140 1.6E-8 T 29-03-2018 IPR024575 Cloacin colicin family GO:0005727|GO:0009405 CPU03_RS17040 6923ee19a00bfca3759b41fc4a92e229 303 SUPERFAMILY SSF69369 135 287 4.45E-30 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 Pfam PF01979 Amidohydrolase family 50 379 1.2E-42 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 Gene3D G3DSA:3.20.20.140 69 350 1.0E-91 T 29-03-2018 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 PIRSF PIRSF038994 1 383 1.9E-116 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 SUPERFAMILY SSF51338 1 53 1.12E-17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 Gene3D G3DSA:2.30.40.10 2 68 3.6E-12 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 SUPERFAMILY SSF51556 54 350 1.11E-98 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS12365 7ee8483c46bb75f8652f46d834a3aa14 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 1.5E-155 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 SUPERFAMILY SSF52172 2 186 2.23E-30 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 Gene3D G3DSA:3.40.50.2300 2 129 7.5E-27 T 29-03-2018 CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 SMART SM00448 2 112 3.3E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.7E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 Gene3D G3DSA:1.10.10.10 130 239 1.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16565 1146bf743d16b940605382f2e0bc2327 239 SMART SM00862 157 233 5.4E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 Gene3D G3DSA:2.60.40.10 145 226 2.1E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 SUPERFAMILY SSF49584 135 225 7.33E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 164 221 3.0E-11 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 PRINTS PR00969 Pili chaperone signature 158 173 3.9E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 PRINTS PR00969 Pili chaperone signature 21 30 3.9E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 PRINTS PR00969 Pili chaperone signature 98 115 3.9E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 PRINTS PR00969 Pili chaperone signature 70 91 3.9E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 PRINTS PR00969 Pili chaperone signature 123 138 3.9E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 SUPERFAMILY SSF49354 16 141 2.41E-38 T 29-03-2018 IPR008962 PapD-like CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 141 9.5E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CPU03_RS13985 a6f182df7998bb75fbf2718e99f5acc2 230 Gene3D G3DSA:2.60.40.10 21 139 1.2E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS00670 1e1a4434723afa18db9381c1313890eb 270 Gene3D G3DSA:1.10.3720.10 8 270 2.2E-34 T 29-03-2018 CPU03_RS00670 1e1a4434723afa18db9381c1313890eb 270 SUPERFAMILY SSF161098 65 255 6.15E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00670 1e1a4434723afa18db9381c1313890eb 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 2.7E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS01480 836fc58debb6399673843c9c33cb19f4 323 Gene3D G3DSA:3.40.50.150 95 323 2.4E-22 T 29-03-2018 CPU03_RS01480 836fc58debb6399673843c9c33cb19f4 323 SUPERFAMILY SSF53335 88 316 6.66E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS01480 836fc58debb6399673843c9c33cb19f4 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 2.9E-143 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CPU03_RS01480 836fc58debb6399673843c9c33cb19f4 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 322 53.332 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CPU03_RS01480 836fc58debb6399673843c9c33cb19f4 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 2.1E-160 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CPU03_RS12845 bb55a051c9a3d0275e85d678325686ad 115 Pfam PF01844 HNH endonuclease 27 74 4.0E-11 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CPU03_RS12845 bb55a051c9a3d0275e85d678325686ad 115 Gene3D G3DSA:3.40.1800.10 6 87 3.7E-7 T 29-03-2018 CPU03_RS12845 bb55a051c9a3d0275e85d678325686ad 115 SMART SM00507 15 70 7.1E-6 T 29-03-2018 IPR003615 HNH nuclease CPU03_RS13790 503237508c0f31486077942f51092f81 258 SUPERFAMILY SSF51366 1 256 3.85E-70 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS13790 503237508c0f31486077942f51092f81 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 5.5E-111 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CPU03_RS13790 503237508c0f31486077942f51092f81 258 Pfam PF00977 Histidine biosynthesis protein 5 239 5.1E-76 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CPU03_RS13790 503237508c0f31486077942f51092f81 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.359 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CPU03_RS13790 503237508c0f31486077942f51092f81 258 Gene3D G3DSA:3.20.20.70 4 252 9.6E-55 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 Gene3D G3DSA:2.40.50.140 32 127 6.4E-31 T 29-03-2018 CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 SUPERFAMILY SSF50249 39 128 4.33E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 Pfam PF00575 S1 RNA binding domain 38 109 4.2E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.5E-102 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.5E-174 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CPU03_RS09905 57ccebaf2fefb61988ef643ef8639c3e 489 SMART SM00316 37 122 2.1E-9 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Gene3D G3DSA:3.30.450.40 212 334 5.5E-4 T 29-03-2018 IPR029016 GAF domain-like CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Pfam PF07730 Histidine kinase 364 427 6.7E-16 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Pfam PF00672 HAMP domain 174 223 2.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 PIRSF PIRSF003167 1 565 3.4E-165 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 SMART SM00387 468 562 8.0E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 SMART SM00304 174 227 1.5E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 126 2.1E-21 T 29-03-2018 IPR029095 NarX-like, N-terminal CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 SUPERFAMILY SSF55874 435 558 5.11E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 560 1.2E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS02830 b922e2a06f27e31945c0fdc03ea9a4dc 566 Gene3D G3DSA:3.30.565.10 427 564 3.3E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CPU03_RS09985 0d6898295e015641a7194553e71ce918 357 Gene3D G3DSA:3.20.20.190 24 351 1.3E-65 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CPU03_RS09985 0d6898295e015641a7194553e71ce918 357 SUPERFAMILY SSF51695 27 350 4.45E-94 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CPU03_RS09985 0d6898295e015641a7194553e71ce918 357 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 31 345 9.9E-75 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CPU03_RS08770 180c72271d3aa6cb178b4dd7952c92a3 280 SUPERFAMILY SSF53335 9 279 2.41E-100 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS08770 180c72271d3aa6cb178b4dd7952c92a3 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.953 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CPU03_RS08770 180c72271d3aa6cb178b4dd7952c92a3 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 1.5E-114 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CPU03_RS08770 180c72271d3aa6cb178b4dd7952c92a3 280 Gene3D G3DSA:3.40.50.150 1 280 8.8E-93 T 29-03-2018 CPU03_RS14490 c2aba73d62bbc6841cedeb66460618b5 233 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS14490 c2aba73d62bbc6841cedeb66460618b5 233 SMART SM00382 31 211 3.0E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS14490 c2aba73d62bbc6841cedeb66460618b5 233 Pfam PF00005 ABC transporter 22 165 2.4E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS14490 c2aba73d62bbc6841cedeb66460618b5 233 SUPERFAMILY SSF52540 5 209 2.61E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14490 c2aba73d62bbc6841cedeb66460618b5 233 Gene3D G3DSA:3.40.50.300 3 231 8.8E-59 T 29-03-2018 CPU03_RS11040 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CPU03_RS11040 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CPU03_RS11040 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CPU03_RS11040 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CPU03_RS11040 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.462 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CPU03_RS13825 2ce8beb056e27bdf24b27c6cab2d219b 276 Gene3D G3DSA:3.40.50.720 1 144 2.5E-18 T 29-03-2018 CPU03_RS13825 2ce8beb056e27bdf24b27c6cab2d219b 276 SUPERFAMILY SSF51735 1 268 1.01E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS13825 2ce8beb056e27bdf24b27c6cab2d219b 276 Gene3D G3DSA:3.90.25.10 166 272 5.4E-10 T 29-03-2018 CPU03_RS13825 2ce8beb056e27bdf24b27c6cab2d219b 276 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 1.7E-7 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS14715 dd834ed9e757998388fe47cbed3f60c0 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.6E-11 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 242 18.332 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 7.1E-79 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 ProSitePatterns PS01218 TatC family signature. 154 173 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 4.6E-65 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 3.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 3.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS07215 489e22bc6e3833e704ee20f4fa10a62e 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 3.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CPU03_RS13525 4895bce0e4768894c3664b7d29c89ab7 251 SUPERFAMILY SSF53335 29 245 1.28E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13525 4895bce0e4768894c3664b7d29c89ab7 251 Gene3D G3DSA:3.40.50.150 5 249 3.0E-48 T 29-03-2018 CPU03_RS13525 4895bce0e4768894c3664b7d29c89ab7 251 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 25 243 3.0E-87 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CPU03_RS13525 4895bce0e4768894c3664b7d29c89ab7 251 Pfam PF13489 Methyltransferase domain 67 209 2.2E-23 T 29-03-2018 CPU03_RS13525 4895bce0e4768894c3664b7d29c89ab7 251 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 23 249 39.025 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CPU03_RS00440 20113b72889d4018afa411aaa0577c24 117 Pfam PF04024 PspC domain 9 66 8.0E-16 T 29-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 29-03-2018 IPR013105 Tetratricopeptide repeat 2 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 Pfam PF13432 Tetratricopeptide repeat 134 195 0.0032 T 29-03-2018 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 SUPERFAMILY SSF48452 27 283 1.61E-74 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 SMART SM00028 130 163 160.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 SMART SM00028 62 95 0.0033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 SMART SM00028 96 129 2.0E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 Gene3D G3DSA:1.25.40.10 20 294 5.0E-48 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 PIRSF PIRSF004654 1 292 3.8E-118 T 29-03-2018 IPR023605 Lipoprotein NlpI CPU03_RS05990 8419f317ea6fbab9c0deaa732303366e 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CPU03_RS16965 29e4ab72b7f3804c05a3bdaae2b7cda8 265 Pfam PF02432 Fimbrial, major and minor subunit 32 264 1.5E-64 T 29-03-2018 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 Gene3D G3DSA:3.30.1220.10 242 341 1.5E-13 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 SUPERFAMILY SSF90002 253 338 5.23E-17 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 SUPERFAMILY SSF52540 4 206 1.7E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 Gene3D G3DSA:3.40.50.300 2 206 2.5E-42 T 29-03-2018 CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 SMART SM00833 247 340 0.0055 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 339 8.4E-14 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS12890 42c97daa341696d9a36141021db2cf1f 347 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 187 1.9E-49 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CPU03_RS14605 128834102c6dd1828d00f2903e06238f 342 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 335 33.469 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CPU03_RS14605 128834102c6dd1828d00f2903e06238f 342 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 339 2.1E-119 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CPU03_RS14605 128834102c6dd1828d00f2903e06238f 342 Gene3D G3DSA:3.30.160.60 76 110 9.2E-16 T 29-03-2018 CPU03_RS14605 128834102c6dd1828d00f2903e06238f 342 Pfam PF02618 YceG-like family 45 330 4.4E-82 T 29-03-2018 IPR003770 Endolytic murein transglycosylase CPU03_RS14605 128834102c6dd1828d00f2903e06238f 342 Gene3D G3DSA:3.30.160.60 305 339 6.4E-16 T 29-03-2018 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 PIRSF PIRSF002599 1 69 1.2E-24 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 Gene3D G3DSA:2.40.50.140 1 69 1.1E-27 T 29-03-2018 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 7.9E-31 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 SUPERFAMILY SSF50249 4 68 5.14E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 29-03-2018 IPR019844 Cold-shock conserved site CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 SMART SM00357 5 69 9.8E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 PRINTS PR00050 Cold shock protein signature 6 21 7.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 PRINTS PR00050 Cold shock protein signature 42 60 7.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14285 7e3c07beb3d3ffcff87a5ccbd66d21ba 69 PRINTS PR00050 Cold shock protein signature 27 36 7.0E-16 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS08805 23ff4a7041bef7e4f01b191cf99bfb6b 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 2.2E-41 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CPU03_RS08805 23ff4a7041bef7e4f01b191cf99bfb6b 329 Gene3D G3DSA:1.10.3470.10 35 318 9.8E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Gene3D G3DSA:2.40.33.10 90 169 2.4E-21 T 29-03-2018 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.1E-51 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 475 6.7E-29 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Gene3D G3DSA:3.20.20.60 170 327 1.5E-52 T 29-03-2018 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 SUPERFAMILY SSF52935 329 479 2.22E-39 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 SUPERFAMILY SSF50800 74 169 4.01E-25 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.6E-132 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 1.5E-172 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 SUPERFAMILY SSF51621 171 344 1.15E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 SUPERFAMILY SSF51621 4 79 1.15E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Gene3D G3DSA:3.40.1380.20 328 480 4.0E-42 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CPU03_RS01385 e7d246ae0db5e95a9f96fc6e5eaf1c52 480 Gene3D G3DSA:3.20.20.60 1 89 9.0E-17 T 29-03-2018 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 SUPERFAMILY SSF55120 11 247 3.45E-80 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 4.6E-19 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 3.1E-22 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Gene3D G3DSA:3.30.2350.10 10 229 9.8E-77 T 29-03-2018 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 4.3E-87 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 6.6E-56 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Gene3D G3DSA:2.30.130.10 250 313 1.7E-15 T 29-03-2018 IPR002478 PUA domain GO:0003723 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.379 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS06005 45a9df0d9d7ceaaa613b166366f98401 320 SUPERFAMILY SSF88697 251 310 2.44E-14 T 29-03-2018 IPR015947 PUA-like domain CPU03_RS12390 67253f7bb91ca727fc5f874ee4f71e61 110 Pfam PF13982 YbfN-like lipoprotein 21 108 1.7E-38 T 29-03-2018 IPR025727 YbfN-like lipoprotein CPU03_RS06680 85ded3a5d3eb766c6ca0e73caee24e43 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 4.7E-142 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CPU03_RS06680 85ded3a5d3eb766c6ca0e73caee24e43 439 Pfam PF13520 Amino acid permease 10 417 1.8E-47 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS06680 85ded3a5d3eb766c6ca0e73caee24e43 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 436 36.481 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CPU03_RS06680 85ded3a5d3eb766c6ca0e73caee24e43 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 7 433 1.3E-238 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CPU03_RS06680 85ded3a5d3eb766c6ca0e73caee24e43 439 PIRSF PIRSF006060 1 439 8.6E-49 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 72 3.1E-35 T 29-03-2018 CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CPU03_RS14105 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 29-03-2018 IPR022967 RNA-binding domain, S1 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 SUPERFAMILY SSF51556 54 351 8.51E-91 T 29-03-2018 IPR032466 Metal-dependent hydrolase CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 Gene3D G3DSA:3.20.20.140 69 351 4.2E-89 T 29-03-2018 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 PIRSF PIRSF038994 2 384 5.3E-122 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 Pfam PF01979 Amidohydrolase family 51 378 8.5E-19 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 9 377 5.0E-84 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 Gene3D G3DSA:2.30.40.10 1 68 1.1E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 SUPERFAMILY SSF51338 5 53 1.56E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS12805 7356a0b5a49513b20af94e7396428aec 385 SUPERFAMILY SSF51338 351 383 1.56E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CPU03_RS08300 4efa029e954105a03dcb780078a2bdc5 150 Pfam PF13480 Acetyltransferase (GNAT) domain 27 104 3.4E-8 T 29-03-2018 CPU03_RS08300 4efa029e954105a03dcb780078a2bdc5 150 SUPERFAMILY SSF55729 5 131 1.32E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS08300 4efa029e954105a03dcb780078a2bdc5 150 Gene3D G3DSA:3.40.630.30 1 145 6.6E-16 T 29-03-2018 CPU03_RS00595 64cc493618023836f4bfe1987f6702c6 167 Pfam PF07813 LTXXQ motif family protein 58 153 3.7E-16 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS00595 64cc493618023836f4bfe1987f6702c6 167 PIRSF PIRSF034445 1 164 7.3E-26 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 Pfam PF01145 SPFH domain / Band 7 family 22 200 2.0E-30 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 29-03-2018 IPR018080 Band 7/stomatin-like, conserved site CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 SUPERFAMILY SSF117892 49 183 8.11E-42 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 SMART SM00244 18 176 3.9E-63 T 29-03-2018 IPR001107 Band 7 domain CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 PRINTS PR00721 Stomatin signature 152 170 9.8E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 PRINTS PR00721 Stomatin signature 171 192 9.8E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 PRINTS PR00721 Stomatin signature 128 151 9.8E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 PRINTS PR00721 Stomatin signature 108 125 9.8E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS03110 2b366d5570ac1a0b55adc226cec38b6a 305 PRINTS PR00721 Stomatin signature 73 94 9.8E-28 T 29-03-2018 IPR001972 Stomatin family GO:0016020 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 9.1E-84 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 SUPERFAMILY SSF50249 13 155 1.14E-46 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.215 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 Gene3D G3DSA:3.30.930.10 156 501 2.2E-102 T 29-03-2018 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 Gene3D G3DSA:2.40.50.140 15 154 6.6E-40 T 29-03-2018 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 PIRSF PIRSF039101 1 505 2.9E-202 T 29-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 505 6.3E-227 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 2.3E-16 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CPU03_RS10685 3c26cdfe25ee7a86f2ae915b5b5fcdb4 505 SUPERFAMILY SSF55681 162 502 1.32E-121 T 29-03-2018 CPU03_RS16640 ee077f13763f41e4bcce677d5245f6a1 217 Pfam PF02308 MgtC family 10 138 4.4E-40 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CPU03_RS16640 ee077f13763f41e4bcce677d5245f6a1 217 PRINTS PR01837 MgtC/SapB protein signature 92 116 3.1E-48 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CPU03_RS16640 ee077f13763f41e4bcce677d5245f6a1 217 PRINTS PR01837 MgtC/SapB protein signature 65 87 3.1E-48 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CPU03_RS16640 ee077f13763f41e4bcce677d5245f6a1 217 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.1E-48 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CPU03_RS16640 ee077f13763f41e4bcce677d5245f6a1 217 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.1E-48 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 SUPERFAMILY SSF52540 3 206 1.15E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 200 3.0E-61 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 321 6.1E-36 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 Gene3D G3DSA:3.40.50.300 7 165 8.8E-27 T 29-03-2018 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 Gene3D G3DSA:1.10.8.10 169 206 4.7E-16 T 29-03-2018 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 SUPERFAMILY SSF48019 209 322 2.04E-30 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 Pfam PF13177 DNA polymerase III, delta subunit 9 165 3.1E-43 T 29-03-2018 CPU03_RS14615 98c775ba7fbc1745445e7cb33b09ecf0 327 Gene3D G3DSA:1.20.272.10 208 325 4.1E-16 T 29-03-2018 CPU03_RS06150 4bc899e7288a19a597faad95fc800a45 116 Gene3D G3DSA:3.10.490.10 1 116 1.6E-27 T 29-03-2018 CPU03_RS06150 4bc899e7288a19a597faad95fc800a45 116 SUPERFAMILY SSF110857 1 111 1.31E-33 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CPU03_RS06150 4bc899e7288a19a597faad95fc800a45 116 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 2.8E-23 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CPU03_RS11570 a43490fce4eab94bcce962fb30850fd7 330 Pfam PF03595 Voltage-dependent anion channel 19 306 1.6E-32 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CPU03_RS10060 1a27290ad1c8b6ced04e07b857d2bd22 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 2.6E-71 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CPU03_RS10060 1a27290ad1c8b6ced04e07b857d2bd22 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 7.5E-139 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CPU03_RS00100 5dc1e692bd276e3ec0c0f881f9a4492e 220 Gene3D G3DSA:2.40.160.20 16 220 2.2E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS00100 5dc1e692bd276e3ec0c0f881f9a4492e 220 Pfam PF06316 Enterobacterial Ail/Lom protein 67 220 4.8E-17 T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CPU03_RS00100 5dc1e692bd276e3ec0c0f881f9a4492e 220 SUPERFAMILY SSF56925 66 220 2.59E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS04605 93849c7e012e5fa85e48cae84662833f 208 SUPERFAMILY SSF52540 1 191 1.33E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS04605 93849c7e012e5fa85e48cae84662833f 208 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 186 1.1E-60 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CPU03_RS04605 93849c7e012e5fa85e48cae84662833f 208 Pfam PF01121 Dephospho-CoA kinase 4 179 4.2E-70 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CPU03_RS04605 93849c7e012e5fa85e48cae84662833f 208 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.443 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CPU03_RS04605 93849c7e012e5fa85e48cae84662833f 208 Gene3D G3DSA:3.40.50.300 2 205 1.5E-44 T 29-03-2018 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 SUPERFAMILY SSF51735 5 156 7.76E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 316 7.4E-34 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 PIRSF PIRSF000148 4 336 7.1E-94 T 29-03-2018 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 Gene3D G3DSA:3.40.50.720 1 142 6.5E-27 T 29-03-2018 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 SMART SM00859 6 121 1.3E-26 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.3E-22 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 Gene3D G3DSA:3.30.360.10 143 313 3.1E-44 T 29-03-2018 CPU03_RS13155 f1fed09d6343140a9676bf0847f2381a 336 SUPERFAMILY SSF55347 132 318 2.71E-50 T 29-03-2018 CPU03_RS06455 3c02e9a5fe4e399900836ee5555982c6 122 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 16 122 34.647 T 29-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 CPU03_RS06455 3c02e9a5fe4e399900836ee5555982c6 122 SUPERFAMILY SSF54913 19 121 1.78E-33 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CPU03_RS06455 3c02e9a5fe4e399900836ee5555982c6 122 Pfam PF03091 CutA1 divalent ion tolerance protein 23 119 7.8E-32 T 29-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CPU03_RS06455 3c02e9a5fe4e399900836ee5555982c6 122 Gene3D G3DSA:3.30.70.120 15 122 1.2E-35 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CPU03_RS14710 4a3e23f0049d364b98d1edb16b5f9aec 293 SUPERFAMILY SSF103481 38 137 3.66E-17 T 29-03-2018 CPU03_RS14710 4a3e23f0049d364b98d1edb16b5f9aec 293 Pfam PF00892 EamA-like transporter family 7 133 6.8E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS14710 4a3e23f0049d364b98d1edb16b5f9aec 293 Pfam PF00892 EamA-like transporter family 146 275 5.8E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS14710 4a3e23f0049d364b98d1edb16b5f9aec 293 SUPERFAMILY SSF103481 180 276 9.68E-10 T 29-03-2018 CPU03_RS15850 195dd66d5a94eea754f18c9921535f25 835 Gene3D G3DSA:3.40.50.200 261 640 7.6E-30 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CPU03_RS15850 195dd66d5a94eea754f18c9921535f25 835 SUPERFAMILY SSF52743 276 637 5.37E-35 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CPU03_RS15850 195dd66d5a94eea754f18c9921535f25 835 Pfam PF00082 Subtilase family 280 623 5.3E-39 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CPU03_RS01615 9b55de2a0d182793aadfb22c9f511dfa 206 Gene3D G3DSA:2.50.20.10 29 205 6.2E-50 T 29-03-2018 CPU03_RS01615 9b55de2a0d182793aadfb22c9f511dfa 206 Pfam PF03550 Outer membrane lipoprotein LolB 49 202 1.4E-46 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CPU03_RS01615 9b55de2a0d182793aadfb22c9f511dfa 206 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 203 2.2E-68 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CPU03_RS01615 9b55de2a0d182793aadfb22c9f511dfa 206 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 204 28.01 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CPU03_RS01615 9b55de2a0d182793aadfb22c9f511dfa 206 SUPERFAMILY SSF89392 19 204 1.65E-51 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 456 1.2E-143 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 Pfam PF01235 Sodium:alanine symporter family 58 461 1.8E-139 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 308 326 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 366 388 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 214 233 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 426 446 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 186 204 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 PRINTS PR00175 Sodium/alanine symporter signature 95 117 1.6E-48 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS10625 51f170fc0daca7ccbc489bf5412636cb 470 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 95 110 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS17200 d5994a1beb076c495c369603e0ce4e4a 128 Pfam PF05261 TraM protein, DNA-binding 1 125 6.0E-51 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CPU03_RS17200 d5994a1beb076c495c369603e0ce4e4a 128 Gene3D G3DSA:1.10.10.450 3 56 1.6E-24 T 29-03-2018 CPU03_RS17200 d5994a1beb076c495c369603e0ce4e4a 128 SUPERFAMILY SSF140581 61 126 1.01E-21 T 29-03-2018 CPU03_RS17200 d5994a1beb076c495c369603e0ce4e4a 128 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 121 2.0E-38 T 29-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CPU03_RS17200 d5994a1beb076c495c369603e0ce4e4a 128 SUPERFAMILY SSF47729 3 56 5.41E-18 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CPU03_RS08685 1a768c20b63e28090efd36778f60369c 249 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 236 6.4E-65 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CPU03_RS08685 1a768c20b63e28090efd36778f60369c 249 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 233 6.3E-85 T 29-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CPU03_RS08685 1a768c20b63e28090efd36778f60369c 249 SUPERFAMILY SSF52540 1 232 5.6E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS08685 1a768c20b63e28090efd36778f60369c 249 Gene3D G3DSA:3.40.50.300 1 245 7.2E-27 T 29-03-2018 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 Gene3D G3DSA:3.20.20.70 25 353 7.7E-44 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 SMART SM00729 52 272 5.8E-52 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 PIRSF PIRSF000167 3 454 4.4E-170 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 Pfam PF06969 HemN C-terminal domain 364 431 2.0E-8 T 29-03-2018 IPR010723 HemN, C-terminal CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 Pfam PF04055 Radical SAM superfamily 57 226 1.0E-15 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 3.1E-218 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CPU03_RS07895 e0878a4c6e74ea18d533c6c3d1cc1b6c 457 SUPERFAMILY SSF102114 6 444 5.62E-142 T 29-03-2018 CPU03_RS14085 ee8a0ba467feaec8aa2ef99ba702a409 321 Pfam PF04393 Protein of unknown function (DUF535) 33 311 2.7E-98 T 29-03-2018 IPR007488 Protein of unknown function DUF535 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 SUPERFAMILY SSF48179 278 487 4.42E-50 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 Gene3D G3DSA:1.10.1040.10 277 489 7.2E-62 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 8.0E-32 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 Gene3D G3DSA:3.40.50.720 1 267 2.0E-63 T 29-03-2018 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 463 4.2E-66 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CPU03_RS05865 26f5944d81ddd0f2a6d9e1e77897f361 492 SUPERFAMILY SSF51735 2 256 1.73E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS05695 d501d3ba1a7f5a5d359c9cb374d5ae6e 349 Pfam PF05125 Phage major capsid protein, P2 family 9 332 3.7E-100 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CPU03_RS05695 d501d3ba1a7f5a5d359c9cb374d5ae6e 349 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 329 2.2E-102 T 29-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 742 0.0 T 29-03-2018 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Gene3D G3DSA:3.30.1360.40 239 332 5.0E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 SUPERFAMILY SSF56719 32 483 1.96E-153 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 682 4.6E-7 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 638 3.7E-4 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 33.998 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Gene3D G3DSA:2.120.10.90 496 747 4.0E-43 T 29-03-2018 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 467 5.9E-134 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 SMART SM00434 12 462 1.9E-232 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 SUPERFAMILY SSF101904 498 741 4.19E-52 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Gene3D G3DSA:1.10.268.10 345 484 5.4E-44 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS06950 4d2c352e203323a2e7716937d7bcc95a 758 Gene3D G3DSA:3.90.199.10 35 217 1.0E-73 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 SUPERFAMILY SSF50249 4 184 1.23E-63 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 PIRSF PIRSF002070 2 179 3.7E-40 T 29-03-2018 CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 Gene3D G3DSA:2.40.50.140 1 118 2.3E-47 T 29-03-2018 CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 Pfam PF00436 Single-strand binding protein family 6 112 2.8E-43 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.94 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS09695 7adea2ce906fccbd28cec8d5996e180e 184 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 184 8.2E-63 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CPU03_RS01965 2d7cc7ec2d336bc4da0a5b068988195c 299 Gene3D G3DSA:3.20.20.370 2 274 1.2E-25 T 29-03-2018 CPU03_RS01965 2d7cc7ec2d336bc4da0a5b068988195c 299 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 62.851 T 29-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 CPU03_RS01965 2d7cc7ec2d336bc4da0a5b068988195c 299 SUPERFAMILY SSF88713 85 267 3.61E-23 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CPU03_RS01965 2d7cc7ec2d336bc4da0a5b068988195c 299 SUPERFAMILY SSF88713 14 41 3.61E-23 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CPU03_RS01965 2d7cc7ec2d336bc4da0a5b068988195c 299 Pfam PF01522 Polysaccharide deacetylase 15 168 8.0E-11 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 Pfam PF00675 Insulinase (Peptidase family M16) 52 166 1.7E-7 T 29-03-2018 IPR011765 Peptidase M16, N-terminal CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 Pfam PF05193 Peptidase M16 inactive domain 203 377 5.2E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 Gene3D G3DSA:3.30.830.10 16 251 1.2E-29 T 29-03-2018 CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 SUPERFAMILY SSF63411 269 450 7.33E-6 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 Gene3D G3DSA:3.30.830.10 257 473 3.2E-21 T 29-03-2018 CPU03_RS08720 b69100f163234a04f25a7dcedb91eb02 505 SUPERFAMILY SSF63411 29 240 1.22E-23 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 118 7.0E-40 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 Gene3D G3DSA:1.20.1300.10 1 118 5.0E-26 T 29-03-2018 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 PIRSF PIRSF000179 1 118 3.2E-47 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 25.681 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 SUPERFAMILY SSF81343 1 118 3.11E-47 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CPU03_RS06385 bdfe2601ccb9bcf9dc739ad94f825479 118 Pfam PF02313 Fumarate reductase subunit D 6 116 4.7E-47 T 29-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CPU03_RS02570 a1e88ffff813e0c0deb7a1420bf8d2b2 255 SUPERFAMILY SSF69572 10 253 1.44E-82 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CPU03_RS02570 a1e88ffff813e0c0deb7a1420bf8d2b2 255 Gene3D G3DSA:3.40.50.720 7 255 4.1E-74 T 29-03-2018 CPU03_RS02570 a1e88ffff813e0c0deb7a1420bf8d2b2 255 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 14 253 1.3E-119 T 29-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CPU03_RS02570 a1e88ffff813e0c0deb7a1420bf8d2b2 255 Pfam PF00899 ThiF family 18 250 1.9E-61 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CPU03_RS16445 bddecd5638958271906296f0e8c1a7e5 108 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 14 108 3.0E-26 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 CPU03_RS16445 bddecd5638958271906296f0e8c1a7e5 108 Pfam PF06932 Protein of unknown function (DUF1283) 30 108 1.2E-38 T 29-03-2018 IPR009700 Protein of unknown function DUF1283 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 SMART SM00771 174 304 3.5E-75 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 306 24.626 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 304 1.4E-84 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 Gene3D G3DSA:3.30.1400.10 175 307 2.6E-55 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 SUPERFAMILY SSF64383 174 310 4.05E-48 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 177 303 4.8E-50 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CPU03_RS02695 73208ed9ac448fac741a297f053c0316 315 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 177 309 2.0E-62 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CPU03_RS08875 b21420833db008f764a882fec50b8a02 344 Pfam PF12146 Serine aminopeptidase, S33 55 315 2.4E-53 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CPU03_RS08875 b21420833db008f764a882fec50b8a02 344 Gene3D G3DSA:3.40.50.1820 32 341 4.8E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS08875 b21420833db008f764a882fec50b8a02 344 SUPERFAMILY SSF53474 14 332 1.36E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 Pfam PF00535 Glycosyl transferase family 2 269 439 2.7E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 Gene3D G3DSA:2.40.10.220 683 792 3.8E-14 T 29-03-2018 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 SUPERFAMILY SSF141371 686 776 2.55E-8 T 29-03-2018 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 Gene3D G3DSA:3.90.550.10 266 502 1.8E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 SUPERFAMILY SSF53448 265 547 2.69E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 140 822 2.5E-275 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 586 605 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 192 212 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 546 565 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 220 245 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 356 380 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 517 543 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 275 294 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 PRINTS PR01439 Cellulose synthase subunit A signature 660 681 2.9E-58 T 29-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CPU03_RS08690 4ede552b84b322c41e820414c9dd6aff 856 Pfam PF07238 PilZ domain 687 784 6.5E-9 T 29-03-2018 IPR009875 PilZ domain GO:0035438 CPU03_RS16885 40a6c2ec199b766ac63e9210e12f3f2e 93 Pfam PF01381 Helix-turn-helix 36 86 4.3E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS16885 40a6c2ec199b766ac63e9210e12f3f2e 93 SUPERFAMILY SSF47413 24 86 6.44E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CPU03_RS16885 40a6c2ec199b766ac63e9210e12f3f2e 93 SMART SM00530 35 90 8.7E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CPU03_RS16885 40a6c2ec199b766ac63e9210e12f3f2e 93 Gene3D G3DSA:1.10.260.40 21 88 3.6E-17 T 29-03-2018 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 SUPERFAMILY SSF56935 27 377 1.65E-55 T 29-03-2018 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 Pfam PF00267 Gram-negative porin 32 377 1.4E-93 T 29-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 101 123 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 253 270 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 157 179 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 27 43 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 56 74 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 283 302 4.2E-46 T 29-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CPU03_RS07760 e7348df8e862599e63d895cd5a9e65fe 377 Gene3D G3DSA:2.40.160.10 30 377 5.6E-35 T 29-03-2018 CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 Pfam PF13247 4Fe-4S dicluster domain 101 196 8.1E-29 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 SUPERFAMILY SSF54862 50 233 1.36E-63 T 29-03-2018 CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 Gene3D G3DSA:3.30.70.20 122 160 4.9E-19 T 29-03-2018 CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 Gene3D G3DSA:3.30.70.20 66 121 1.3E-13 T 29-03-2018 CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 Gene3D G3DSA:3.30.70.20 161 241 1.0E-22 T 29-03-2018 CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS16115 c961bff3c012c1c92110fe239abef0f5 255 Gene3D G3DSA:3.30.70.20 4 65 0.0048 T 29-03-2018 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 Pfam PF01228 Glycine radical 630 741 3.5E-43 T 29-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 3.7E-205 T 29-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 29-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 Gene3D G3DSA:3.20.70.20 2 760 8.9E-296 T 29-03-2018 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 PIRSF PIRSF000379 8 760 0.0 T 29-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CPU03_RS14220 2e55cdd48d51a360b49881a72e389d4e 760 SUPERFAMILY SSF51998 5 759 5.26E-293 T 29-03-2018 CPU03_RS16305 ca0205907807643e8483b5cccda41098 288 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 54.427 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CPU03_RS16305 ca0205907807643e8483b5cccda41098 288 Pfam PF08543 Phosphomethylpyrimidine kinase 74 262 2.5E-15 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CPU03_RS16305 ca0205907807643e8483b5cccda41098 288 SUPERFAMILY SSF53613 1 281 4.37E-76 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS16305 ca0205907807643e8483b5cccda41098 288 Gene3D G3DSA:3.40.1190.20 1 286 3.9E-63 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS16305 ca0205907807643e8483b5cccda41098 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 3.0E-132 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CPU03_RS05805 9439af03e3b5690f2545957d0ce444b7 132 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 132 6.2E-44 T 29-03-2018 IPR016052 Bacteriophage 933W, L0136 CPU03_RS05805 9439af03e3b5690f2545957d0ce444b7 132 SUPERFAMILY SSF101756 33 130 3.01E-35 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS05805 9439af03e3b5690f2545957d0ce444b7 132 Gene3D G3DSA:2.40.50.200 21 132 7.0E-38 T 29-03-2018 CPU03_RS05805 9439af03e3b5690f2545957d0ce444b7 132 Pfam PF04076 Bacterial OB fold (BOF) protein 33 130 3.5E-35 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS09340 b8d548f1d6c0be64e0e9fd9e0c9ba24f 124 Gene3D G3DSA:3.40.1260.10 2 124 1.2E-30 T 29-03-2018 CPU03_RS09340 b8d548f1d6c0be64e0e9fd9e0c9ba24f 124 SUPERFAMILY SSF75169 1 124 1.18E-35 T 29-03-2018 IPR027396 DsrEFH-like CPU03_RS09340 b8d548f1d6c0be64e0e9fd9e0c9ba24f 124 Pfam PF02635 DsrE/DsrF-like family 4 124 1.1E-29 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CPU03_RS09340 b8d548f1d6c0be64e0e9fd9e0c9ba24f 124 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 124 3.3E-48 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CPU03_RS09340 b8d548f1d6c0be64e0e9fd9e0c9ba24f 124 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 2 124 35.162 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 Gene3D G3DSA:3.40.190.10 84 268 6.2E-16 T 29-03-2018 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 Pfam PF03466 LysR substrate binding domain 85 270 1.7E-18 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 SUPERFAMILY SSF46785 2 84 5.45E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 SUPERFAMILY SSF53850 84 270 2.35E-19 T 29-03-2018 CPU03_RS07705 4a578730786672b91ddfaa2d41f24ba2 278 Gene3D G3DSA:1.10.10.10 1 83 7.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS17190 3cf993fc1080fb406cd233bef0d45a57 70 Pfam PF05509 TraY domain 15 59 6.2E-15 T 29-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CPU03_RS01950 bc0387335680369d8065afbddc244523 127 Pfam PF00892 EamA-like transporter family 39 117 1.6E-7 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS01950 bc0387335680369d8065afbddc244523 127 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 123 19.928 T 29-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CPU03_RS01950 bc0387335680369d8065afbddc244523 127 SUPERFAMILY SSF103481 36 124 6.28E-14 T 29-03-2018 CPU03_RS17225 e6fe4b9c639b599ac9037f18b467618a 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 4 141 3.0E-65 T 29-03-2018 IPR009385 Plasmid SOS inhibition CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Pfam PF04348 LppC putative lipoprotein 40 287 6.6E-53 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Pfam PF04348 LppC putative lipoprotein 376 693 1.0E-89 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Gene3D G3DSA:3.40.50.2300 141 247 0.29 T 29-03-2018 CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Gene3D G3DSA:3.40.50.2300 257 522 1.2E-37 T 29-03-2018 CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Gene3D G3DSA:3.40.50.2300 523 686 1.5E-17 T 29-03-2018 CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 SUPERFAMILY SSF53822 545 698 3.94E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 SUPERFAMILY SSF53822 259 287 3.94E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 SUPERFAMILY SSF53822 377 507 3.94E-74 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS05170 b968e8b100cb3acf80ba1055ca38081c 699 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 693 36.905 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA CPU03_RS08670 4947160cb14cdb70895bef667dedcd89 68 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 3 59 2.8E-17 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CPU03_RS08670 4947160cb14cdb70895bef667dedcd89 68 Pfam PF11120 Cellulose biosynthesis protein BcsF 3 56 1.9E-17 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CPU03_RS08670 4947160cb14cdb70895bef667dedcd89 68 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 54 0.003 T 29-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CPU03_RS01775 38033e5f0803f1b3d51e4fc3fd239a2a 164 SUPERFAMILY SSF50341 17 156 8.89E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS01775 38033e5f0803f1b3d51e4fc3fd239a2a 164 Gene3D G3DSA:2.40.50.180 35 99 2.5E-19 T 29-03-2018 CPU03_RS01775 38033e5f0803f1b3d51e4fc3fd239a2a 164 SMART SM00260 14 151 4.9E-47 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS01775 38033e5f0803f1b3d51e4fc3fd239a2a 164 Gene3D G3DSA:2.30.30.40 100 145 5.2E-17 T 29-03-2018 CPU03_RS01775 38033e5f0803f1b3d51e4fc3fd239a2a 164 Pfam PF01584 CheW-like domain 18 154 1.5E-37 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CPU03_RS10065 72fb407d69079ba83cfc2260704b9a23 383 Pfam PF00144 Beta-lactamase 48 361 4.4E-61 T 29-03-2018 IPR001466 Beta-lactamase-related CPU03_RS10065 72fb407d69079ba83cfc2260704b9a23 383 SUPERFAMILY SSF56601 31 361 2.09E-67 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS10065 72fb407d69079ba83cfc2260704b9a23 383 Gene3D G3DSA:3.40.710.10 29 380 1.3E-68 T 29-03-2018 CPU03_RS12790 a3f70c0369a5c58322913eb1d007dc9c 256 Pfam PF03609 PTS system sorbose-specific iic component 3 233 4.3E-68 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CPU03_RS03885 816e9b959544b75f8ff043d4d30413c2 391 Gene3D G3DSA:1.10.443.10 205 384 3.2E-25 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS03885 816e9b959544b75f8ff043d4d30413c2 391 SUPERFAMILY SSF56349 100 379 2.38E-62 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS03885 816e9b959544b75f8ff043d4d30413c2 391 Pfam PF00589 Phage integrase family 206 370 8.2E-23 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS03885 816e9b959544b75f8ff043d4d30413c2 391 Pfam PF13356 Arm DNA-binding domain 3 88 3.6E-20 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CPU03_RS03885 816e9b959544b75f8ff043d4d30413c2 391 Gene3D G3DSA:1.10.150.130 88 204 1.4E-18 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Pfam PF14310 Fibronectin type III-like domain 688 756 7.3E-21 T 29-03-2018 IPR026891 Fibronectin type III-like domain CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Gene3D G3DSA:3.20.20.300 35 374 1.2E-103 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 SMART SM01217 687 756 1.5E-27 T 29-03-2018 IPR026891 Fibronectin type III-like domain CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 SUPERFAMILY SSF51445 28 396 2.74E-99 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 48 354 1.5E-90 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 275 292 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 103 119 1.8E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 122 141 1.8E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 275 293 1.8E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 168 184 1.8E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 205 221 1.8E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 SUPERFAMILY SSF52279 397 466 1.7E-57 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 SUPERFAMILY SSF52279 497 653 1.7E-57 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 397 650 1.8E-59 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Gene3D G3DSA:3.40.50.1700 383 650 8.0E-82 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CPU03_RS13370 41b0b63ffd05a7cc378b2c82d13c4bdd 767 Gene3D G3DSA:2.60.40.10 651 765 2.0E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 2.0E-73 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 1.7E-96 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 Pfam PF03379 CcmB protein 3 216 1.3E-92 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CPU03_RS13010 23c37ae4a569a7950cbe1b909aa6a83e 219 PIRSF PIRSF002764 1 219 4.2E-84 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CPU03_RS16590 f883e9ef8be5459de26dfb90bfd1243c 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 28 60 1.8E-6 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS16590 f883e9ef8be5459de26dfb90bfd1243c 150 Gene3D G3DSA:2.160.10.10 8 150 7.6E-28 T 29-03-2018 CPU03_RS16590 f883e9ef8be5459de26dfb90bfd1243c 150 SUPERFAMILY SSF51161 10 150 4.58E-26 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.8E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.8E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.8E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.8E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.5E-26 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS06040 de9e24de975379c5a3443305b65d89cd 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.4E-22 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CPU03_RS00960 8982f87bcbc9a7784816a990381ff408 249 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 20.967 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 CPU03_RS00960 8982f87bcbc9a7784816a990381ff408 249 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 6.8E-79 T 29-03-2018 IPR009627 Uncharacterised protein family UPF0259 CPU03_RS04980 c5f54951dae44bdeeccd8cd094c933eb 258 Pfam PF03883 Peroxide stress protein YaaA 1 241 2.7E-88 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CPU03_RS04980 c5f54951dae44bdeeccd8cd094c933eb 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 35.56 T 29-03-2018 IPR005583 Peroxide stress protein YaaA CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 SMART SM00487 22 219 1.5E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 65.88 T 29-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Pfam PF00271 Helicase conserved C-terminal domain 229 336 1.0E-28 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 SMART SM00490 255 336 2.2E-29 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Gene3D G3DSA:3.40.50.300 4 219 1.3E-55 T 29-03-2018 CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 8.9E-42 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 SUPERFAMILY SSF52540 73 351 5.26E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Gene3D G3DSA:3.40.50.300 220 454 4.9E-43 T 29-03-2018 CPU03_RS01670 499134bb70f52225894dae393b2c067d 457 Pfam PF03880 DbpA RNA binding domain 384 454 2.3E-23 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 Gene3D G3DSA:3.30.1330.50 1 157 2.1E-72 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 SUPERFAMILY SSF69765 1 156 3.53E-65 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.1E-68 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.182 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS10945 a46a352967785da426d354b47e23df9e 157 Pfam PF02542 YgbB family 1 154 1.2E-65 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CPU03_RS13415 5a26be905632d5cc99a6899f7ad8eff1 165 Pfam PF06496 Protein of unknown function (DUF1097) 8 141 5.4E-38 T 29-03-2018 IPR009476 Protein of unknown function DUF1097 CPU03_RS08315 1ef2e0f2933fdf1c03dbcd2fb3cac0c2 467 Pfam PF00860 Permease family 36 430 3.5E-108 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS08315 1ef2e0f2933fdf1c03dbcd2fb3cac0c2 467 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 31 460 6.1E-138 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS08315 1ef2e0f2933fdf1c03dbcd2fb3cac0c2 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 378 398 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS09530 1413719ccddd5eb38886d451810de589 481 Pfam PF02386 Cation transport protein 40 475 7.5E-52 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CPU03_RS09530 1413719ccddd5eb38886d451810de589 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.6E-103 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CPU03_RS09530 1413719ccddd5eb38886d451810de589 481 PIRSF PIRSF006247 1 481 4.7E-164 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CPU03_RS15490 956c24f3f13e18785dbf890180b567d0 612 Gene3D G3DSA:3.90.550.10 110 418 3.8E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS15490 956c24f3f13e18785dbf890180b567d0 612 Pfam PF00535 Glycosyl transferase family 2 113 305 1.4E-19 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS15490 956c24f3f13e18785dbf890180b567d0 612 SUPERFAMILY SSF53448 349 481 3.28E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS15490 956c24f3f13e18785dbf890180b567d0 612 SUPERFAMILY SSF53448 283 307 3.28E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS15490 956c24f3f13e18785dbf890180b567d0 612 SUPERFAMILY SSF53448 111 240 3.28E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 411 511 6.9E-10 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 Gene3D G3DSA:3.30.230.10 302 529 4.0E-28 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 468 486 1.7E-11 T 29-03-2018 CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 438 457 1.7E-11 T 29-03-2018 CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 408 427 1.7E-11 T 29-03-2018 CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 325 341 1.7E-11 T 29-03-2018 CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 SUPERFAMILY SSF54211 325 516 4.55E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS02080 a23c033918bc209d6d36f4cf391d6186 562 Pfam PF13654 AAA domain 116 299 2.2E-23 T 29-03-2018 CPU03_RS16460 c4a5ea6bbe0731cb10d3ce9390d5e501 141 Pfam PF00582 Universal stress protein family 1 137 3.7E-11 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS16460 c4a5ea6bbe0731cb10d3ce9390d5e501 141 PIRSF PIRSF006276 1 140 3.0E-17 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS16460 c4a5ea6bbe0731cb10d3ce9390d5e501 141 Gene3D G3DSA:3.40.50.620 1 140 4.2E-13 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS16460 c4a5ea6bbe0731cb10d3ce9390d5e501 141 SUPERFAMILY SSF52402 1 137 4.02E-15 T 29-03-2018 CPU03_RS01855 d9d070c1e7629ade6c85631dfd17e57b 410 SUPERFAMILY SSF53850 21 324 1.41E-37 T 29-03-2018 CPU03_RS01855 d9d070c1e7629ade6c85631dfd17e57b 410 Pfam PF13343 Bacterial extracellular solute-binding protein 74 301 1.3E-30 T 29-03-2018 CPU03_RS01855 d9d070c1e7629ade6c85631dfd17e57b 410 Gene3D G3DSA:3.40.190.10 123 284 8.9E-21 T 29-03-2018 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 Gene3D G3DSA:1.10.240.10 212 334 6.3E-28 T 29-03-2018 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 SUPERFAMILY SSF52374 13 338 8.45E-72 T 29-03-2018 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 Gene3D G3DSA:3.40.50.620 10 211 4.0E-51 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 75 94 3.2E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.2E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 24 40 3.2E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 153 174 3.2E-20 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 29 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 Pfam PF00579 tRNA synthetases class I (W and Y) 12 293 8.7E-49 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS13455 958d7bf1fbbca5a8da23692dc2a95d05 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 12 338 5.5E-65 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CPU03_RS01595 a49cb5de6d97e4cdf0a929b591c59666 269 SUPERFAMILY SSF48452 189 251 1.49E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS01595 a49cb5de6d97e4cdf0a929b591c59666 269 Pfam PF13371 Tetratricopeptide repeat 187 258 8.8E-25 T 29-03-2018 CPU03_RS01595 a49cb5de6d97e4cdf0a929b591c59666 269 Gene3D G3DSA:1.25.40.120 30 260 1.2E-7 T 29-03-2018 CPU03_RS01595 a49cb5de6d97e4cdf0a929b591c59666 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.9E-39 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 PIRSF PIRSF003107 7 226 2.8E-68 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 Pfam PF01895 PhoU domain 128 212 1.1E-16 T 29-03-2018 IPR026022 PhoU domain CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 Pfam PF01895 PhoU domain 26 111 6.9E-22 T 29-03-2018 IPR026022 PhoU domain CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 Gene3D G3DSA:1.20.58.220 120 237 4.3E-25 T 29-03-2018 CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 SUPERFAMILY SSF109755 13 231 1.47E-69 T 29-03-2018 CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.3E-72 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CPU03_RS08145 60a9bbef969cd3f52b4387b32f0bce31 240 Gene3D G3DSA:1.20.58.220 6 119 2.6E-28 T 29-03-2018 CPU03_RS06510 e57617ec1a11e6b408b06d52494c4132 219 SUPERFAMILY SSF89155 10 211 9.55E-42 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06510 e57617ec1a11e6b408b06d52494c4132 219 Gene3D G3DSA:1.10.3480.10 5 219 1.7E-38 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS06510 e57617ec1a11e6b408b06d52494c4132 219 Hamap MF_01150 Chaperone protein TorD [torD]. 4 211 29.532 T 29-03-2018 IPR023069 Chaperone TorD CPU03_RS06510 e57617ec1a11e6b408b06d52494c4132 219 Pfam PF02613 Nitrate reductase delta subunit 52 180 1.2E-27 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS01520 360be7a5df3d751cecf82c72d8eadb82 402 Gene3D G3DSA:1.20.1250.20 199 393 1.8E-18 T 29-03-2018 CPU03_RS01520 360be7a5df3d751cecf82c72d8eadb82 402 Pfam PF07690 Major Facilitator Superfamily 20 236 1.9E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS01520 360be7a5df3d751cecf82c72d8eadb82 402 SUPERFAMILY SSF103473 13 386 3.01E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS01520 360be7a5df3d751cecf82c72d8eadb82 402 Gene3D G3DSA:1.20.1250.20 8 195 7.0E-25 T 29-03-2018 CPU03_RS01520 360be7a5df3d751cecf82c72d8eadb82 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 399 39.646 T 29-03-2018 IPR022855 Multidrug resistance protein MdtH CPU03_RS13980 05ecc58330e8230c31edd921242ddbf2 817 Pfam PF13953 PapC C-terminal domain 744 805 2.9E-8 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CPU03_RS13980 05ecc58330e8230c31edd921242ddbf2 817 Pfam PF13954 PapC N-terminal domain 27 163 2.1E-31 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS13980 05ecc58330e8230c31edd921242ddbf2 817 SUPERFAMILY SSF141729 50 154 1.44E-22 T 29-03-2018 CPU03_RS13980 05ecc58330e8230c31edd921242ddbf2 817 Pfam PF00577 Outer membrane usher protein 178 734 1.3E-164 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS02035 4ec858338728cdd19c4151451cc5d53b 163 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 156 1.5E-24 T 29-03-2018 IPR018635 Uncharacterised protein family UPF0319 CPU03_RS14295 80f8e32f63e5f11b4bbf3176fb82259d 58 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.273 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CPU03_RS14295 80f8e32f63e5f11b4bbf3176fb82259d 58 Pfam PF03966 Trm112p-like protein 2 41 2.2E-9 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CPU03_RS14295 80f8e32f63e5f11b4bbf3176fb82259d 58 SUPERFAMILY SSF158997 1 53 6.67E-19 T 29-03-2018 CPU03_RS14295 80f8e32f63e5f11b4bbf3176fb82259d 58 Gene3D G3DSA:2.20.25.10 8 58 4.9E-17 T 29-03-2018 CPU03_RS06970 ef151d2953dcb9b0f358d0f2ab7071c8 210 Pfam PF00293 NUDIX domain 59 179 8.6E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS06970 ef151d2953dcb9b0f358d0f2ab7071c8 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 7.7E-73 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CPU03_RS06970 ef151d2953dcb9b0f358d0f2ab7071c8 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS06970 ef151d2953dcb9b0f358d0f2ab7071c8 210 Gene3D G3DSA:3.90.79.10 3 209 2.2E-42 T 29-03-2018 CPU03_RS06970 ef151d2953dcb9b0f358d0f2ab7071c8 210 SUPERFAMILY SSF55811 10 202 6.23E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS04845 b617f60739cd5de89febce6c18f530c4 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 36.258 T 29-03-2018 IPR020914 Uncharacterised protein family UPF0442 CPU03_RS04845 b617f60739cd5de89febce6c18f530c4 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 146 1.2E-35 T 29-03-2018 IPR024528 Threonine/Serine exporter, ThrE CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 4.8E-91 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 Gene3D G3DSA:3.40.190.10 14 133 7.0E-38 T 29-03-2018 CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 Gene3D G3DSA:3.40.190.10 134 243 2.6E-23 T 29-03-2018 CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 SMART SM00079 22 243 2.3E-5 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 SMART SM00062 22 243 2.0E-87 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 6.2E-73 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CPU03_RS13965 5abb59ed8a4aa868dad5d01534883a66 243 SUPERFAMILY SSF53850 1 242 1.41E-75 T 29-03-2018 CPU03_RS06710 34ba5f5f6e63982762a57f748c1cfa35 460 Pfam PF07690 Major Facilitator Superfamily 45 421 3.6E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS06710 34ba5f5f6e63982762a57f748c1cfa35 460 Gene3D G3DSA:1.20.1250.20 243 460 1.2E-21 T 29-03-2018 CPU03_RS06710 34ba5f5f6e63982762a57f748c1cfa35 460 Gene3D G3DSA:1.20.1250.20 21 236 3.8E-14 T 29-03-2018 CPU03_RS06710 34ba5f5f6e63982762a57f748c1cfa35 460 TIGRFAM TIGR00886 2A0108: nitrite transporter 35 417 7.0E-94 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CPU03_RS06710 34ba5f5f6e63982762a57f748c1cfa35 460 SUPERFAMILY SSF103473 15 456 7.85E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS16005 98ddc10d4c46e44a7f49b408da8d5ed7 414 Pfam PF13252 Protein of unknown function (DUF4043) 53 401 5.1E-140 T 29-03-2018 IPR025267 Protein of unknown function DUF4043 CPU03_RS16005 98ddc10d4c46e44a7f49b408da8d5ed7 414 TIGRFAM TIGR04387 capsid_maj_N4: major capsid protein, N4-gp56 family 50 294 2.8E-19 T 29-03-2018 CPU03_RS10415 ceceeced2d26af3d5b26f65215aabe37 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 4.6E-62 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CPU03_RS10415 ceceeced2d26af3d5b26f65215aabe37 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 8.2E-53 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 SUPERFAMILY SSF54862 191 280 1.17E-18 T 29-03-2018 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 SUPERFAMILY SSF54862 99 143 1.17E-18 T 29-03-2018 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 Gene3D G3DSA:3.30.70.20 230 260 2.1E-6 T 29-03-2018 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 2.2E-112 T 29-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 Gene3D G3DSA:3.30.70.20 261 287 9.0E-5 T 29-03-2018 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 Gene3D G3DSA:3.30.70.20 195 229 1.0E-6 T 29-03-2018 CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 Pfam PF12801 4Fe-4S binding domain 177 212 2.3E-4 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS02805 a1a127176306af6755d8cd5cc7787357 288 Pfam PF12801 4Fe-4S binding domain 82 127 9.8E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS00490 0a0e0155d1d5abf30895fa0e513b9f8e 112 Pfam PF04355 SmpA / OmlA family 34 107 8.9E-6 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.502 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 SUPERFAMILY SSF52141 5 221 2.4E-95 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 SMART SM00987 49 210 6.6E-41 T 29-03-2018 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 Gene3D G3DSA:3.40.470.10 1 230 2.4E-106 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.2E-88 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 7.6E-26 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS11705 d849f2c0f0504e9135ae43faa6ba36f8 232 SMART SM00986 49 210 6.6E-41 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 SUPERFAMILY SSF52096 18 280 2.85E-81 T 29-03-2018 IPR029045 ClpP/crotonase-like domain CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 2.4E-79 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 Gene3D G3DSA:3.90.226.10 7 224 1.7E-65 T 29-03-2018 CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.5E-148 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 Gene3D G3DSA:1.10.12.10 225 273 4.3E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal CPU03_RS13435 d00f6630ae56faf34f19343604da95d0 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 56.019 T 29-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CPU03_RS02385 2442f5d35bb4381cae1ec1ebb4365919 300 Pfam PF00535 Glycosyl transferase family 2 5 135 9.9E-30 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS02385 2442f5d35bb4381cae1ec1ebb4365919 300 Gene3D G3DSA:3.90.550.10 2 266 2.4E-42 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02385 2442f5d35bb4381cae1ec1ebb4365919 300 SUPERFAMILY SSF53448 3 213 6.67E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 798 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 SUPERFAMILY SSF53756 4 799 5.1E-290 T 29-03-2018 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 Gene3D G3DSA:3.40.50.2000 469 784 6.2E-132 T 29-03-2018 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 PIRSF PIRSF000460 7 801 1.4E-202 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 Pfam PF00343 Carbohydrate phosphorylase 96 798 0.0 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CPU03_RS09065 fde076616768875d37826a03e7c85c02 801 Gene3D G3DSA:3.40.50.2000 3 468 3.6E-171 T 29-03-2018 CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 Gene3D G3DSA:3.40.50.720 1 235 9.1E-58 T 29-03-2018 CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 SUPERFAMILY SSF51735 3 232 2.94E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 8.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 8.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 8.9E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 9.4E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 9.4E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 9.4E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 9.4E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 9.4E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 Pfam PF00106 short chain dehydrogenase 3 187 1.7E-52 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CPU03_RS16450 42ac03bfcd19737ddfd4879107067a2d 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CPU03_RS09745 255c819ae1fde7441417497c49b3afc9 197 SUPERFAMILY SSF53448 13 194 8.55E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09745 255c819ae1fde7441417497c49b3afc9 197 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 14 192 2.9E-56 T 29-03-2018 IPR017696 Molybdenum cofactor cytidylyltransferase KEGG: 00790+2.7.7.76|MetaCyc: PWY-6476 CPU03_RS09745 255c819ae1fde7441417497c49b3afc9 197 Gene3D G3DSA:3.90.550.10 8 196 5.8E-28 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS09745 255c819ae1fde7441417497c49b3afc9 197 Pfam PF12804 MobA-like NTP transferase domain 15 166 7.4E-28 T 29-03-2018 IPR025877 MobA-like NTP transferase CPU03_RS00145 b0c8423ef3cd18f47e5f146181e7ba28 131 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 117 1.4E-19 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail CPU03_RS00145 b0c8423ef3cd18f47e5f146181e7ba28 131 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 130 3.7E-22 T 29-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail CPU03_RS12795 a547647beaabd05c2bfea56ee2721134 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 296 5.5E-82 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CPU03_RS16605 bb683bec32d01eeaf8b0c3bd2c141c57 110 Pfam PF07027 Protein of unknown function (DUF1318) 20 109 3.7E-28 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CPU03_RS16605 bb683bec32d01eeaf8b0c3bd2c141c57 110 PIRSF PIRSF025560 2 109 2.1E-35 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CPU03_RS14400 eada607122cd8fbdd9a276538554ba10 417 Pfam PF02120 Flagellar hook-length control protein FliK 289 370 6.3E-21 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 124 144 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 2 24 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 106 124 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 61 82 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 42 59 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 84 105 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PRINTS PR01004 Flagellar FliJ protein signature 25 41 1.9E-38 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 Pfam PF02050 Flagellar FliJ protein 17 139 4.3E-35 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 139 8.2E-32 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 Gene3D G3DSA:1.10.287.620 2 145 2.2E-4 T 29-03-2018 CPU03_RS14405 ba1f4e5883bc66d4d08fd2fdfa6129aa 146 PIRSF PIRSF019404 1 146 2.0E-48 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 SUPERFAMILY SSF56601 211 233 3.42E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 SUPERFAMILY SSF56601 262 313 3.42E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 SUPERFAMILY SSF56601 674 839 3.42E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 SUPERFAMILY SSF56601 423 611 3.42E-111 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 607 9.0E-24 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Gene3D G3DSA:1.10.3810.10 47 246 8.5E-81 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 SUPERFAMILY SSF53955 43 256 3.94E-80 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Gene3D G3DSA:2.40.50.140 348 413 9.5E-24 T 29-03-2018 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Pfam PF17092 Penicillin-binding protein OB-like domain 316 426 7.5E-31 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 787 3.3E-167 T 29-03-2018 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Pfam PF00912 Transglycosylase 56 229 4.3E-63 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 CPU03_RS09205 aba13170da6f773c8e4b0204186b2329 854 Gene3D G3DSA:3.40.710.10 414 798 8.3E-93 T 29-03-2018 CPU03_RS00560 921f7764b1b75d58062b4c1684dabcc2 344 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 49.665 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CPU03_RS00560 921f7764b1b75d58062b4c1684dabcc2 344 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 293 1.1E-89 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS00560 921f7764b1b75d58062b4c1684dabcc2 344 SUPERFAMILY SSF51445 3 320 2.11E-83 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS00560 921f7764b1b75d58062b4c1684dabcc2 344 Gene3D G3DSA:3.20.20.300 1 343 1.4E-76 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CPU03_RS00560 921f7764b1b75d58062b4c1684dabcc2 344 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CPU03_RS02930 6444b67e79fad84d12b0e96eea09b930 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.3E-90 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CPU03_RS02930 6444b67e79fad84d12b0e96eea09b930 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 7.3E-65 T 29-03-2018 CPU03_RS02930 6444b67e79fad84d12b0e96eea09b930 208 SUPERFAMILY SSF53271 4 206 1.57E-65 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS02930 6444b67e79fad84d12b0e96eea09b930 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.221 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CPU03_RS02930 6444b67e79fad84d12b0e96eea09b930 208 Gene3D G3DSA:3.40.50.2020 1 206 4.6E-60 T 29-03-2018 CPU03_RS03400 5c7b1331683bfb04ecfb431365ecec16 201 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 195 1.4E-39 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CPU03_RS08255 abd12abad88ec6efa316ad540ee29990 239 Pfam PF11254 Protein of unknown function (DUF3053) 16 233 1.6E-87 T 29-03-2018 IPR021413 Protein of unknown function DUF3053 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 SMART SM00342 25 108 9.3E-35 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 Gene3D G3DSA:1.10.10.60 62 118 3.2E-14 T 29-03-2018 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 SUPERFAMILY SSF46689 61 110 1.25E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 SUPERFAMILY SSF46689 10 59 1.21E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 3.1E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 3.1E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 Pfam PF12833 Helix-turn-helix domain 31 110 1.2E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS12870 26b822eabbc9d383a1f502bdb7fc153b 127 Gene3D G3DSA:1.10.10.60 1 61 1.7E-16 T 29-03-2018 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 Gene3D G3DSA:3.40.50.620 1 213 5.5E-66 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 Gene3D G3DSA:2.30.30.280 214 281 5.6E-29 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 SUPERFAMILY SSF52402 5 296 8.82E-59 T 29-03-2018 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 4.8E-158 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.874 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 Gene3D G3DSA:2.40.30.10 283 366 3.4E-28 T 29-03-2018 CPU03_RS14790 c572b83db18a8fa05afd4db8860a3a20 367 Pfam PF03054 tRNA methyl transferase 7 361 1.6E-144 T 29-03-2018 CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 Pfam PF00027 Cyclic nucleotide-binding domain 44 128 1.4E-20 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 Gene3D G3DSA:2.60.120.10 9 152 2.1E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 SUPERFAMILY SSF46785 161 231 1.97E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 SMART SM00100 20 143 8.8E-12 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 SUPERFAMILY SSF51206 44 150 8.25E-27 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like CPU03_RS10425 535d58a77db459492a43364518ac67d2 243 Gene3D G3DSA:1.10.10.10 153 239 2.4E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15755 6d8abb6b96f7e511092fd13270d66c30 170 Gene3D G3DSA:3.30.2020.10 1 73 1.4E-10 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS15755 6d8abb6b96f7e511092fd13270d66c30 170 SUPERFAMILY SSF143880 1 72 1.83E-11 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS15755 6d8abb6b96f7e511092fd13270d66c30 170 Pfam PF10387 Protein of unknown function (DUF2442) 4 66 6.9E-7 T 29-03-2018 IPR018841 Protein of unknown function DUF2442 CPU03_RS00955 dfaa76057ec4cc8daa0e8204f0f5a11b 134 Pfam PF03692 Putative zinc- or iron-chelating domain 15 106 1.1E-9 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CPU03_RS04615 885005d6b6f7072ca8ecd7fa76fe2abc 66 SUPERFAMILY SSF57716 5 63 5.92E-23 T 29-03-2018 CPU03_RS04615 885005d6b6f7072ca8ecd7fa76fe2abc 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 19.522 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CPU03_RS04615 885005d6b6f7072ca8ecd7fa76fe2abc 66 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 1.0E-26 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CPU03_RS04615 885005d6b6f7072ca8ecd7fa76fe2abc 66 Gene3D G3DSA:3.30.50.10 3 61 1.8E-27 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09375 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain CPU03_RS11445 e19ccc2fafe5a9fd1eac80d9b95b3de4 413 Pfam PF05977 Transmembrane secretion effector 15 398 1.6E-18 T 29-03-2018 IPR010290 Transmembrane secretion effector CPU03_RS11445 e19ccc2fafe5a9fd1eac80d9b95b3de4 413 SUPERFAMILY SSF103473 7 397 3.92E-38 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS11445 e19ccc2fafe5a9fd1eac80d9b95b3de4 413 Gene3D G3DSA:1.20.1250.20 6 196 3.7E-12 T 29-03-2018 CPU03_RS11445 e19ccc2fafe5a9fd1eac80d9b95b3de4 413 Gene3D G3DSA:1.20.1250.20 212 409 6.3E-25 T 29-03-2018 CPU03_RS15760 44fcdfba1a4f3a6d0bcdceb019a1deb2 188 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 24 113 8.5E-22 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS15760 44fcdfba1a4f3a6d0bcdceb019a1deb2 188 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 13 118 4.8E-21 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 SMART SM00922 115 210 1.2E-8 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 Gene3D G3DSA:3.20.20.120 111 295 6.3E-41 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 SUPERFAMILY SSF54826 1 99 9.19E-28 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 5.6E-113 T 29-03-2018 CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 Gene3D G3DSA:3.30.390.10 1 110 1.1E-21 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 319 24.726 T 29-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 SUPERFAMILY SSF51604 105 307 1.01E-51 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS13440 1e4fcd653b23167d3f8c01996dbc7634 323 Pfam PF13378 Enolase C-terminal domain-like 127 279 3.1E-16 T 29-03-2018 IPR029065 Enolase C-terminal domain-like CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 286 1.4E-24 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 Pfam PF01545 Cation efflux family 15 206 1.6E-46 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 Gene3D G3DSA:3.30.70.1350 206 294 7.0E-23 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 SUPERFAMILY SSF161111 8 207 2.22E-52 T 29-03-2018 CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 SUPERFAMILY SSF160240 209 287 5.62E-24 T 29-03-2018 CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 Gene3D G3DSA:1.20.1510.10 8 205 7.0E-42 T 29-03-2018 CPU03_RS08420 45ccbd212e19d22c31bbf064117122a8 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 8.3E-72 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 SUPERFAMILY SSF56281 44 294 1.82E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 Gene3D G3DSA:3.60.15.10 42 343 8.7E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 144 165 1.7E-22 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 253 264 1.7E-22 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 272 285 1.7E-22 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 117 135 1.7E-22 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 298 309 1.7E-22 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 Pfam PF02112 cAMP phosphodiesterases class-II 106 342 2.4E-37 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS12475 be76958b57c42bd72745697b322b4a46 351 PIRSF PIRSF000962 31 347 7.4E-76 T 29-03-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 CPU03_RS07625 24b61145921ecee30b5021f2f4c9b552 375 Pfam PF13439 Glycosyltransferase Family 4 17 183 3.1E-18 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CPU03_RS07625 24b61145921ecee30b5021f2f4c9b552 375 Gene3D G3DSA:3.40.50.2000 7 191 7.8E-7 T 29-03-2018 CPU03_RS07625 24b61145921ecee30b5021f2f4c9b552 375 Gene3D G3DSA:3.40.50.2000 192 355 1.5E-34 T 29-03-2018 CPU03_RS07625 24b61145921ecee30b5021f2f4c9b552 375 Pfam PF00534 Glycosyl transferases group 1 194 337 4.0E-26 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 CPU03_RS07625 24b61145921ecee30b5021f2f4c9b552 375 SUPERFAMILY SSF53756 5 373 1.17E-69 T 29-03-2018 CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 1.8E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 1.8E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 141 155 1.8E-9 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 Gene3D G3DSA:3.40.50.1820 16 422 3.0E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 SUPERFAMILY SSF53474 322 407 1.5E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 SUPERFAMILY SSF53474 47 171 1.5E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS06750 edda3cd122c60937c02b433beec275d4 429 Pfam PF00561 alpha/beta hydrolase fold 52 405 3.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 1.2E-187 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 SUPERFAMILY SSF53335 6 365 1.79E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 43.127 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 366 2.1E-183 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CPU03_RS07765 5804fe5194121b9093f6fb331d2c383e 366 Gene3D G3DSA:3.40.50.150 169 366 4.7E-35 T 29-03-2018 CPU03_RS16630 c234c1aa51ce275d550a85a588633ad7 140 Pfam PF03724 META domain 24 130 8.2E-8 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CPU03_RS00875 cc21c2587e16360090b2d73723a668c7 75 Gene3D G3DSA:1.20.58.250 3 65 4.5E-30 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS00875 cc21c2587e16360090b2d73723a668c7 75 Pfam PF06440 DNA polymerase III, theta subunit 2 64 7.1E-34 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS00875 cc21c2587e16360090b2d73723a668c7 75 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 71 8.0E-21 T 29-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CPU03_RS00875 cc21c2587e16360090b2d73723a668c7 75 SUPERFAMILY SSF46575 1 64 4.84E-29 T 29-03-2018 CPU03_RS11630 69a0e6de523d3ca930db721cc7caac8b 250 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 10 250 2.0E-47 T 29-03-2018 CPU03_RS02990 e9f84a4e4779ad8c5a75f8db7668d9c7 301 Pfam PF00480 ROK family 3 299 2.5E-83 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS02990 e9f84a4e4779ad8c5a75f8db7668d9c7 301 SUPERFAMILY SSF53067 2 299 7.87E-61 T 29-03-2018 CPU03_RS02990 e9f84a4e4779ad8c5a75f8db7668d9c7 301 Gene3D G3DSA:3.30.420.40 1 115 3.0E-25 T 29-03-2018 CPU03_RS02990 e9f84a4e4779ad8c5a75f8db7668d9c7 301 ProSitePatterns PS01125 ROK family signature. 130 157 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS02990 e9f84a4e4779ad8c5a75f8db7668d9c7 301 Gene3D G3DSA:3.30.420.40 116 300 7.0E-50 T 29-03-2018 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 SUPERFAMILY SSF110324 2 81 1.4E-34 T 29-03-2018 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 6.4E-44 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.523 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 Gene3D G3DSA:2.40.50.100 20 84 1.8E-31 T 29-03-2018 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.2E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.2E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.2E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.8E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 5.0E-19 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06100 05934c884676a5753c2d55abb0e4fa11 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS13620 8125c838eee96840c2422555c043cc46 585 Gene3D G3DSA:3.40.720.10 259 543 7.5E-28 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS13620 8125c838eee96840c2422555c043cc46 585 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.6E-105 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal CPU03_RS13620 8125c838eee96840c2422555c043cc46 585 Pfam PF00884 Sulfatase 260 499 7.4E-19 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS13620 8125c838eee96840c2422555c043cc46 585 SUPERFAMILY SSF53649 258 554 1.74E-40 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS13620 8125c838eee96840c2422555c043cc46 585 PIRSF PIRSF004950 6 585 9.8E-212 T 29-03-2018 IPR012159 Inner membrane protein YejM CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 SMART SM01092 181 283 1.5E-26 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 Gene3D G3DSA:3.30.43.10 3 56 4.5E-12 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 181 281 1.3E-25 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 SUPERFAMILY SSF55447 181 286 1.83E-26 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 Gene3D G3DSA:3.30.390.50 177 292 9.5E-28 T 29-03-2018 CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 170 1.4E-44 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 Gene3D G3DSA:3.30.465.10 57 173 1.4E-29 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CPU03_RS04875 3e0afe71b77bccdd41a841d4042942a4 292 SUPERFAMILY SSF56176 6 171 8.72E-47 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CPU03_RS14445 4c894481e55a4b3a531ee39d01fb6a40 135 Pfam PF02561 Flagellar protein FliS 8 125 5.2E-38 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CPU03_RS14445 4c894481e55a4b3a531ee39d01fb6a40 135 PIRSF PIRSF039090 1 134 1.7E-41 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CPU03_RS14445 4c894481e55a4b3a531ee39d01fb6a40 135 SUPERFAMILY SSF101116 8 128 2.35E-38 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CPU03_RS14445 4c894481e55a4b3a531ee39d01fb6a40 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 2.1E-38 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CPU03_RS14445 4c894481e55a4b3a531ee39d01fb6a40 135 Gene3D G3DSA:1.20.120.340 2 129 1.7E-41 T 29-03-2018 CPU03_RS13925 265891d1fcd0da17edeae4b3f3a748b8 64 Pfam PF14056 Domain of unknown function (DUF4250) 8 61 1.1E-22 T 29-03-2018 IPR025346 Protein of unknown function DUF4250 CPU03_RS00715 575953f0f14591285ba7d5aad81d4f1e 182 PIRSF PIRSF030780 1 179 1.3E-88 T 29-03-2018 IPR016956 Inner membrane protein YdjM CPU03_RS00715 575953f0f14591285ba7d5aad81d4f1e 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 163 1.4E-33 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 SUPERFAMILY SSF55811 7 133 1.49E-28 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 Pfam PF00293 NUDIX domain 12 130 1.3E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 PRINTS PR00502 NUDIX hydrolase family signature 36 50 5.9E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 PRINTS PR00502 NUDIX hydrolase family signature 50 65 5.9E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS03000 4c7a384e4cde614278e28636f38a77fc 157 Gene3D G3DSA:3.90.79.10 3 141 1.7E-28 T 29-03-2018 CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 SUPERFAMILY SSF103025 16 244 1.57E-57 T 29-03-2018 CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 SUPERFAMILY SSF101790 246 328 1.96E-20 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 Gene3D G3DSA:3.30.70.1400 28 242 1.2E-20 T 29-03-2018 CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 136 1.8E-7 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 190 254 3.6E-24 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site CPU03_RS10645 aae778a0581e796407f5a28238184a06 331 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 324 43.706 T 29-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 CPU03_RS00285 4abb651444b5456e3f1b290235af9dd5 245 Pfam PF06992 Replication protein P 33 202 1.0E-39 T 29-03-2018 IPR009731 Replication P GO:0006270 CPU03_RS16985 bdb52a6021e918bd0d9475b3839e4584 163 Pfam PF17547 Family of unknown function (DUF5462) 6 162 4.4E-56 T 29-03-2018 IPR035191 K88 minor fimbrial subunit FaeF CPU03_RS16985 bdb52a6021e918bd0d9475b3839e4584 163 ProDom PD016515 MINOR FIMBRIAL SUBUNIT PLASMID FIMBRIA K88 CSHD LDAF FAEF CLPF 1 163 8.0E-63 T 29-03-2018 IPR035191 K88 minor fimbrial subunit FaeF CPU03_RS03650 21ca72665b9ec1b2e4e0b2f2c790bc56 83 Gene3D G3DSA:3.30.910.10 1 79 1.2E-13 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS03650 21ca72665b9ec1b2e4e0b2f2c790bc56 83 Pfam PF06183 DinI-like family 17 80 1.9E-13 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS03650 21ca72665b9ec1b2e4e0b2f2c790bc56 83 SUPERFAMILY SSF54857 5 76 3.53E-5 T 29-03-2018 IPR010391 DNA damage-inducible protein DinI-like CPU03_RS08175 885774a473ef45ffb8a4a231396de3b0 197 Pfam PF01713 Smr domain 99 179 2.4E-22 T 29-03-2018 IPR002625 Smr domain CPU03_RS08175 885774a473ef45ffb8a4a231396de3b0 197 SMART SM00463 96 179 2.2E-15 T 29-03-2018 IPR002625 Smr domain CPU03_RS08175 885774a473ef45ffb8a4a231396de3b0 197 SUPERFAMILY SSF160443 97 179 8.89E-16 T 29-03-2018 IPR002625 Smr domain CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 29-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 29.127 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 Pfam PF02223 Thymidylate kinase 8 198 5.4E-59 T 29-03-2018 CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 Gene3D G3DSA:3.40.50.300 1 212 1.6E-52 T 29-03-2018 CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.2E-64 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CPU03_RS14610 4bf8512c1f2169c8efd2d7c299bbfad7 213 SUPERFAMILY SSF52540 1 208 1.43E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10825 476e68152e6de450b58a46776d3e2af8 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 25.037 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CPU03_RS10825 476e68152e6de450b58a46776d3e2af8 113 PIRSF PIRSF004761 1 113 3.3E-39 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CPU03_RS10825 476e68152e6de450b58a46776d3e2af8 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 29-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CPU03_RS10825 476e68152e6de450b58a46776d3e2af8 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.0E-33 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CPU03_RS10825 476e68152e6de450b58a46776d3e2af8 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.6E-40 T 29-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CPU03_RS01540 170c2cf17998d02d5895dead1f249873 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 313 455 6.9E-10 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS01540 170c2cf17998d02d5895dead1f249873 478 SMART SM00267 299 460 9.5E-5 T 29-03-2018 IPR000160 GGDEF domain CPU03_RS01540 170c2cf17998d02d5895dead1f249873 478 SUPERFAMILY SSF55073 316 458 3.69E-14 T 29-03-2018 IPR029787 Nucleotide cyclase CPU03_RS01540 170c2cf17998d02d5895dead1f249873 478 Gene3D G3DSA:3.30.70.270 301 461 1.6E-15 T 29-03-2018 CPU03_RS14190 53fab79a94a9b1fa83ffcfe7f21bcc7e 89 Gene3D G3DSA:3.30.1660.10 21 89 2.9E-18 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS14190 53fab79a94a9b1fa83ffcfe7f21bcc7e 89 Pfam PF07338 Protein of unknown function (DUF1471) 34 89 1.8E-15 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS14190 53fab79a94a9b1fa83ffcfe7f21bcc7e 89 SUPERFAMILY SSF159871 1 89 1.01E-21 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 SUPERFAMILY SSF55174 5 98 3.39E-13 T 29-03-2018 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 232 1.0E-62 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 SUPERFAMILY SSF55120 69 237 8.22E-45 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 Gene3D G3DSA:3.30.70.580 62 150 3.2E-19 T 29-03-2018 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 3.5E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 SMART SM00363 3 74 3.4E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 Gene3D G3DSA:3.10.290.10 1 61 1.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 Pfam PF01479 S4 domain 4 44 7.3E-12 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CPU03_RS00865 1db7322d5cb393abf6ce703fb7d104f3 291 Gene3D G3DSA:3.30.70.1560 151 219 4.6E-22 T 29-03-2018 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 2.5E-33 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 SUPERFAMILY SSF143800 1 67 9.02E-28 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 Pfam PF01197 Ribosomal protein L31 1 65 2.1E-29 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.56 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.1E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.1E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08515 b7377dd1dea4f4b28eb88c2f4730b607 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.1E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS05590 21cc25f0091e3bf4039975d3b189a581 579 SUPERFAMILY SSF69349 339 519 1.96E-15 T 29-03-2018 CPU03_RS05590 21cc25f0091e3bf4039975d3b189a581 579 Gene3D G3DSA:2.40.50.230 224 346 9.8E-7 T 29-03-2018 IPR006531 Gp5 N-terminal CPU03_RS05590 21cc25f0091e3bf4039975d3b189a581 579 SUPERFAMILY SSF69255 257 347 2.56E-11 T 29-03-2018 CPU03_RS11660 e9d4710e0a7dfe10456c474e8bd3e3bb 397 Gene3D G3DSA:1.10.150.130 92 210 1.0E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS11660 e9d4710e0a7dfe10456c474e8bd3e3bb 397 Gene3D G3DSA:1.10.443.10 211 389 2.0E-27 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS11660 e9d4710e0a7dfe10456c474e8bd3e3bb 397 Pfam PF13356 Arm DNA-binding domain 8 94 5.8E-17 T 29-03-2018 IPR025166 Integrase, DNA-binding domain CPU03_RS11660 e9d4710e0a7dfe10456c474e8bd3e3bb 397 SUPERFAMILY SSF56349 107 386 3.24E-60 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS11660 e9d4710e0a7dfe10456c474e8bd3e3bb 397 Pfam PF00589 Phage integrase family 213 377 2.0E-28 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS05255 89b7e40e71cbb5b958040fde801f7ee0 161 Gene3D G3DSA:2.30.30.220 10 107 1.5E-40 T 29-03-2018 IPR007481 Stringent starvation protein B CPU03_RS05255 89b7e40e71cbb5b958040fde801f7ee0 161 SUPERFAMILY SSF101738 4 114 1.11E-47 T 29-03-2018 IPR007481 Stringent starvation protein B CPU03_RS05255 89b7e40e71cbb5b958040fde801f7ee0 161 PIRSF PIRSF005276 3 161 1.6E-58 T 29-03-2018 IPR007481 Stringent starvation protein B CPU03_RS05255 89b7e40e71cbb5b958040fde801f7ee0 161 Pfam PF04386 Stringent starvation protein B 9 161 2.9E-41 T 29-03-2018 IPR007481 Stringent starvation protein B CPU03_RS13345 c9a13623556d969cc1ed8b34d309f302 190 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 158 8.3E-31 T 29-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 Gene3D G3DSA:3.30.360.10 170 314 1.8E-48 T 29-03-2018 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 151 9.6E-30 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 155 171 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 169 317 1.1E-14 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 9 339 6.5E-119 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 Gene3D G3DSA:3.40.50.720 4 169 1.4E-41 T 29-03-2018 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 SMART SM00859 9 152 5.7E-51 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 8 340 37.573 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 SUPERFAMILY SSF51735 8 189 1.94E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS07815 71e4bb50214e6c691485df1f045d00f6 340 SUPERFAMILY SSF55347 160 314 4.67E-49 T 29-03-2018 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 Pfam PF01709 Transcriptional regulator 5 236 1.2E-93 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 Gene3D G3DSA:1.10.10.200 1 78 2.0E-30 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 Gene3D G3DSA:3.30.70.980 83 174 1.0E-31 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 Gene3D G3DSA:3.30.70.980 175 248 1.5E-12 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 SUPERFAMILY SSF75625 3 245 2.09E-96 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 9.8E-105 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS01435 dc0e2a62ab7aa6aed3760550dbf853a6 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.013 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CPU03_RS16580 42d4d2c3cce3a40e0078afb8a66fd7ca 156 Pfam PF13673 Acetyltransferase (GNAT) domain 30 143 8.6E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS16580 42d4d2c3cce3a40e0078afb8a66fd7ca 156 Gene3D G3DSA:3.40.630.30 1 156 6.5E-23 T 29-03-2018 CPU03_RS16580 42d4d2c3cce3a40e0078afb8a66fd7ca 156 SUPERFAMILY SSF55729 1 153 2.84E-29 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS16700 738898ad75f2a0ab232005fb4924f866 348 Gene3D G3DSA:3.20.20.70 7 348 4.0E-119 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS16700 738898ad75f2a0ab232005fb4924f866 348 PIRSF PIRSF001361 1 348 2.6E-153 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS16700 738898ad75f2a0ab232005fb4924f866 348 Pfam PF00793 DAHP synthetase I family 43 337 3.0E-99 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CPU03_RS16700 738898ad75f2a0ab232005fb4924f866 348 SUPERFAMILY SSF51569 7 346 7.64E-131 T 29-03-2018 CPU03_RS16700 738898ad75f2a0ab232005fb4924f866 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 347 7.4E-164 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 SUPERFAMILY SSF161098 62 256 1.96E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 Gene3D G3DSA:1.10.3720.10 57 269 5.9E-20 T 29-03-2018 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 Gene3D G3DSA:1.10.3720.10 365 574 1.5E-19 T 29-03-2018 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 560 5.0E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 252 7.5E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS10035 044ed84f5f5355c01d9a6446ba9d315f 578 SUPERFAMILY SSF161098 374 563 1.44E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 SUPERFAMILY SSF101386 4 102 2.24E-25 T 29-03-2018 CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 Gene3D G3DSA:1.10.287.1080 139 264 4.2E-30 T 29-03-2018 CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 Gene3D G3DSA:1.10.287.1080 1 127 1.5E-39 T 29-03-2018 CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 TIGRFAM TIGR00444 mazG: MazG family protein 12 259 3.3E-105 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 102 8.7E-29 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 228 1.4E-8 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CPU03_RS11800 571fb85c220b94a930321e1baf28011f 264 SUPERFAMILY SSF101386 138 234 3.92E-24 T 29-03-2018 CPU03_RS12480 877f3044377d49dc965f31fa8de7381d 247 Gene3D G3DSA:3.40.1390.30 109 218 2.0E-32 T 29-03-2018 CPU03_RS12480 877f3044377d49dc965f31fa8de7381d 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 4.4E-59 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CPU03_RS12480 877f3044377d49dc965f31fa8de7381d 247 Gene3D G3DSA:3.40.1390.30 4 108 1.2E-26 T 29-03-2018 CPU03_RS12480 877f3044377d49dc965f31fa8de7381d 247 SUPERFAMILY SSF102705 1 246 3.01E-83 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CPU03_RS12480 877f3044377d49dc965f31fa8de7381d 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 245 6.3E-72 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CPU03_RS08675 c51a9febe10bc3c8049938ad5a545747 518 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 155 471 3.3E-90 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CPU03_RS08675 c51a9febe10bc3c8049938ad5a545747 518 Pfam PF10995 GGDEF I-site like or GIL domain 161 470 5.6E-104 T 29-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CPU03_RS16380 a0766fd9d5b694899c9de7b84717f1bc 492 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 471 4.6E-128 T 29-03-2018 IPR010352 Protein of unknown function DUF945 CPU03_RS07835 72867e4cc79f0ef06325e80550ac1c87 195 SUPERFAMILY SSF48498 91 185 2.13E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS07835 72867e4cc79f0ef06325e80550ac1c87 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 6.1E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CPU03_RS07835 72867e4cc79f0ef06325e80550ac1c87 195 Gene3D G3DSA:1.10.357.10 59 188 6.5E-11 T 29-03-2018 CPU03_RS07835 72867e4cc79f0ef06325e80550ac1c87 195 Gene3D G3DSA:1.10.10.60 1 58 8.6E-13 T 29-03-2018 CPU03_RS07835 72867e4cc79f0ef06325e80550ac1c87 195 SUPERFAMILY SSF46689 4 81 5.64E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS16925 6e0d870181e83112656bd0b9c182bd5b 331 Gene3D G3DSA:1.10.1410.20 184 316 0.0029 T 29-03-2018 CPU03_RS16925 6e0d870181e83112656bd0b9c182bd5b 331 Gene3D G3DSA:3.30.460.10 20 183 1.6E-16 T 29-03-2018 CPU03_RS04470 44d44cc806cd4431df985269a6f92f67 262 Pfam PF03609 PTS system sorbose-specific iic component 3 233 4.3E-73 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CPU03_RS07180 a4588865a2f11c16f1a11288a784a939 443 SUPERFAMILY SSF55920 163 438 1.83E-54 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS07180 a4588865a2f11c16f1a11288a784a939 443 Pfam PF00557 Metallopeptidase family M24 168 429 2.3E-45 T 29-03-2018 IPR000994 Peptidase M24 CPU03_RS07180 a4588865a2f11c16f1a11288a784a939 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.172 T 29-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CPU03_RS07180 a4588865a2f11c16f1a11288a784a939 443 Gene3D G3DSA:3.90.230.10 146 442 2.4E-53 T 29-03-2018 CPU03_RS07180 a4588865a2f11c16f1a11288a784a939 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.656 T 29-03-2018 IPR023071 Transcriptional regulator, SlyA CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 SUPERFAMILY SSF46785 4 139 1.48E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 Pfam PF01047 MarR family 29 87 1.6E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 Gene3D G3DSA:1.10.10.10 1 140 1.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.3E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.3E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.3E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.3E-25 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CPU03_RS16275 e04de10b81424772feb3327b06586d5b 143 SMART SM00347 22 123 2.9E-27 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CPU03_RS08645 68691f1e7d36dfbf60e62918628410a3 339 Gene3D G3DSA:1.10.3720.10 3 325 5.1E-48 T 29-03-2018 CPU03_RS08645 68691f1e7d36dfbf60e62918628410a3 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 4.2E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08645 68691f1e7d36dfbf60e62918628410a3 339 SUPERFAMILY SSF161098 89 160 1.23E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08645 68691f1e7d36dfbf60e62918628410a3 339 SUPERFAMILY SSF161098 200 322 1.23E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13145 7c8be6ad24b70b955efe75f047abef39 167 Pfam PF08534 Redoxin 40 145 6.9E-11 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CPU03_RS13145 7c8be6ad24b70b955efe75f047abef39 167 Gene3D G3DSA:3.40.30.10 29 155 7.0E-21 T 29-03-2018 CPU03_RS13145 7c8be6ad24b70b955efe75f047abef39 167 SUPERFAMILY SSF52833 6 153 7.11E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS06875 6203dfe07df924cc6d183c43380b37c1 168 SUPERFAMILY SSF64288 9 166 1.77E-42 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS06875 6203dfe07df924cc6d183c43380b37c1 168 Gene3D G3DSA:3.40.1410.10 3 166 3.0E-43 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CPU03_RS06875 6203dfe07df924cc6d183c43380b37c1 168 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 11 166 24.233 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CPU03_RS06875 6203dfe07df924cc6d183c43380b37c1 168 Pfam PF04345 Chorismate lyase 11 168 8.7E-35 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 Pfam PF00209 Sodium:neurotransmitter symporter family 152 446 1.6E-29 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 Pfam PF00209 Sodium:neurotransmitter symporter family 15 125 2.4E-23 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 51 70 1.8E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 22 43 1.8E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 96 122 1.8E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 320 340 1.8E-14 T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 38 52 - T 29-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CPU03_RS08850 c94e1331562c17073b0a93bf71b2fc8e 449 SUPERFAMILY SSF161070 16 448 2.75E-120 T 29-03-2018 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 Gene3D G3DSA:3.90.79.10 1 138 2.5E-26 T 29-03-2018 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 Pfam PF00293 NUDIX domain 2 123 1.4E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.9E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.9E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS08575 b5b8f8b7a19002aa1b1709c3fb663919 141 SUPERFAMILY SSF55811 2 126 2.44E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 Gene3D G3DSA:3.40.50.150 191 385 1.9E-29 T 29-03-2018 CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 PIRSF PIRSF037565 7 380 1.3E-156 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 379 48.69 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 SUPERFAMILY SSF53335 198 375 1.09E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05825 34f1e893fa4423f0c87ceb695eb0f80a 385 Pfam PF05175 Methyltransferase small domain 206 376 2.3E-52 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 Pfam PF00582 Universal stress protein family 1 143 2.2E-20 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 SUPERFAMILY SSF52402 2 143 2.16E-24 T 29-03-2018 CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 Gene3D G3DSA:3.40.50.620 1 143 4.8E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 PRINTS PR01438 Universal stress protein signature 2 20 2.5E-14 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 PRINTS PR01438 Universal stress protein signature 121 143 2.5E-14 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS15590 33121a952cf52cb2eddeae5326a3557b 143 PRINTS PR01438 Universal stress protein signature 104 116 2.5E-14 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 147 2.5E-47 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 310 321 1.7E-31 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 Gene3D G3DSA:3.40.50.1370 147 318 4.7E-51 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 331 7.8E-131 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 SUPERFAMILY SSF53671 4 332 9.82E-98 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 Gene3D G3DSA:3.40.50.1370 1 146 6.8E-55 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 7.8E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 7.8E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 7.8E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 296 319 7.8E-26 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 329 1.2E-52 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CPU03_RS10015 540ee26bee55c111e4b9429a02c3d708 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 332 81.051 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 355 1.4E-68 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 258 280 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 518 542 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 446 465 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 471 492 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 PRINTS PR01005 Flagellar hook-associated protein signature 358 380 9.5E-61 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 497 550 5.0E-8 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 Pfam PF00460 Flagella basal body rod protein 5 34 1.9E-5 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 Gene3D G3DSA:1.20.1170.10 99 524 8.5E-6 T 29-03-2018 CPU03_RS02190 5bb4bbf0ff1ce5bfe790f9ca1fac1c05 552 SUPERFAMILY SSF64518 102 550 1.7E-38 T 29-03-2018 CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 SUPERFAMILY SSF52540 109 355 8.64E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.1E-97 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 SUPERFAMILY SSF117916 15 87 3.6E-5 T 29-03-2018 IPR034904 Fe-S cluster assembly domain CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 Gene3D G3DSA:3.40.50.300 71 329 2.3E-60 T 29-03-2018 CPU03_RS02450 6fbb9b69b73e564823288a61af8608c4 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.977 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CPU03_RS08190 01002c1be1753b039bdbfbb24958925d 84 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.148 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CPU03_RS08190 01002c1be1753b039bdbfbb24958925d 84 SMART SM01234 8 75 9.4E-45 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CPU03_RS08190 01002c1be1753b039bdbfbb24958925d 84 Pfam PF01809 Haemolytic domain 10 75 3.2E-30 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CPU03_RS08190 01002c1be1753b039bdbfbb24958925d 84 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 2.0E-23 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CPU03_RS08190 01002c1be1753b039bdbfbb24958925d 84 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 83 5.5E-35 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CPU03_RS09445 1a5c405212b846aeb0b2a5e5a31cf65f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.005 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CPU03_RS09445 1a5c405212b846aeb0b2a5e5a31cf65f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CPU03_RS09445 1a5c405212b846aeb0b2a5e5a31cf65f 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.6E-26 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09445 1a5c405212b846aeb0b2a5e5a31cf65f 101 Gene3D G3DSA:4.10.830.10 1 101 5.1E-33 T 29-03-2018 CPU03_RS09445 1a5c405212b846aeb0b2a5e5a31cf65f 101 SUPERFAMILY SSF57716 2 101 1.35E-37 T 29-03-2018 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 483 5.4E-49 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 SUPERFAMILY SSF47170 26 180 1.18E-18 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.9E-65 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 Gene3D G3DSA:1.20.120.30 24 187 2.1E-19 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 Gene3D G3DSA:1.10.287.950 330 519 3.5E-47 T 29-03-2018 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 SMART SM00304 215 267 1.8E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 SUPERFAMILY SSF58104 235 516 5.62E-69 T 29-03-2018 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 SMART SM00283 268 515 2.9E-87 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 Gene3D G3DSA:1.10.287.1060 245 329 0.33 T 29-03-2018 CPU03_RS13740 4eda97c479fdfe270f54d1cfa740e7bd 526 Pfam PF02203 Tar ligand binding domain homologue 1 168 1.6E-17 T 29-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CPU03_RS00665 290f2f966b4877af94e8bccab3550364 324 Gene3D G3DSA:1.10.3720.10 2 308 1.2E-29 T 29-03-2018 CPU03_RS00665 290f2f966b4877af94e8bccab3550364 324 SUPERFAMILY SSF161098 93 302 2.83E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00665 290f2f966b4877af94e8bccab3550364 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 318 2.6E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 391 6.9E-85 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 143 8.5E-43 T 29-03-2018 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 Gene3D G3DSA:3.30.230.10 2 186 1.3E-37 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 494 5.1E-188 T 29-03-2018 IPR004482 Mg chelatase-related protein CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 SUPERFAMILY SSF52540 191 502 3.94E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 SMART SM00382 211 391 4.6E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 3.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 3.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 342 354 3.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 3.7E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 SUPERFAMILY SSF54211 10 168 2.73E-29 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 Gene3D G3DSA:3.40.50.300 187 456 2.5E-23 T 29-03-2018 CPU03_RS07565 cae6594a769c15d588174f4b8d963c2c 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 2.0E-28 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CPU03_RS01415 9e5a7fbeefcab6105759d8e3cd712d44 261 SUPERFAMILY SSF81345 3 257 7.06E-40 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS01415 9e5a7fbeefcab6105759d8e3cd712d44 261 Gene3D G3DSA:1.10.3470.10 1 261 4.2E-29 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS01415 9e5a7fbeefcab6105759d8e3cd712d44 261 Pfam PF00950 ABC 3 transport family 1 255 1.0E-83 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CPU03_RS08130 8fed62c7eff93ae9fc00f82e3b9ec232 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 312 1.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08130 8fed62c7eff93ae9fc00f82e3b9ec232 323 Gene3D G3DSA:1.10.3720.10 13 311 9.7E-32 T 29-03-2018 CPU03_RS08130 8fed62c7eff93ae9fc00f82e3b9ec232 323 SUPERFAMILY SSF161098 34 309 7.06E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08130 8fed62c7eff93ae9fc00f82e3b9ec232 323 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 316 5.4E-92 T 29-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CPU03_RS05710 11427bfe27d21f02e024d9540be0dc97 349 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 326 3.3E-72 T 29-03-2018 IPR006430 Phage portal protein PBSX family CPU03_RS05710 11427bfe27d21f02e024d9540be0dc97 349 PIRSF PIRSF018494 1 343 7.6E-136 T 29-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria CPU03_RS05710 11427bfe27d21f02e024d9540be0dc97 349 Pfam PF04860 Phage portal protein 100 322 4.9E-12 T 29-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.9E-64 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.2E-74 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 SUPERFAMILY SSF52166 10 200 8.37E-73 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 Gene3D G3DSA:3.40.1370.10 141 199 1.1E-11 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CPU03_RS09385 ecd90ea0af6f517863b92dff3588f5e7 201 Gene3D G3DSA:3.40.1370.10 4 140 1.3E-47 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CPU03_RS15635 bd9489b9a739caff6514a0fbf8ac2136 99 SMART SM00418 8 89 9.3E-9 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS15635 bd9489b9a739caff6514a0fbf8ac2136 99 Pfam PF12840 Helix-turn-helix domain 5 69 1.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15635 bd9489b9a739caff6514a0fbf8ac2136 99 Gene3D G3DSA:1.10.10.10 1 98 1.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15635 bd9489b9a739caff6514a0fbf8ac2136 99 SUPERFAMILY SSF46785 2 93 1.43E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16995 3a660d44556b1dc603e399ed995b02be 794 Pfam PF00577 Outer membrane usher protein 178 715 5.1E-90 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS16995 3a660d44556b1dc603e399ed995b02be 794 Pfam PF13954 PapC N-terminal domain 28 163 7.9E-20 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS16995 3a660d44556b1dc603e399ed995b02be 794 SUPERFAMILY SSF141729 46 141 6.28E-16 T 29-03-2018 CPU03_RS16995 3a660d44556b1dc603e399ed995b02be 794 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 280 290 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site CPU03_RS15255 2e7ba70a0e3111f56b2c8d43a4cde71c 222 Gene3D G3DSA:3.40.50.850 1 222 1.4E-57 T 29-03-2018 CPU03_RS15255 2e7ba70a0e3111f56b2c8d43a4cde71c 222 Pfam PF00857 Isochorismatase family 20 212 7.7E-48 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS15255 2e7ba70a0e3111f56b2c8d43a4cde71c 222 SUPERFAMILY SSF52499 5 220 7.46E-60 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS04360 c558a892f053e254ef4c96b7fa861489 108 Pfam PF12084 Protein of unknown function (DUF3561) 14 107 3.4E-38 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 CPU03_RS04360 c558a892f053e254ef4c96b7fa861489 108 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 2 108 3.0E-27 T 29-03-2018 IPR022721 Protein of unknown function DUF3561 CPU03_RS13115 53447aa76dc3b4e7b4f2514d2d895d30 248 SUPERFAMILY SSF53335 5 142 1.81E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS13115 53447aa76dc3b4e7b4f2514d2d895d30 248 Gene3D G3DSA:3.40.50.150 3 187 4.9E-23 T 29-03-2018 CPU03_RS13115 53447aa76dc3b4e7b4f2514d2d895d30 248 Pfam PF13649 Methyltransferase domain 39 124 1.1E-12 T 29-03-2018 CPU03_RS01750 cc9e95d084efb010e085f18c1f8d8a7f 129 SMART SM00448 6 120 8.8E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01750 cc9e95d084efb010e085f18c1f8d8a7f 129 Pfam PF00072 Response regulator receiver domain 9 120 2.6E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS01750 cc9e95d084efb010e085f18c1f8d8a7f 129 SUPERFAMILY SSF52172 5 125 8.97E-37 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS01750 cc9e95d084efb010e085f18c1f8d8a7f 129 Gene3D G3DSA:3.40.50.2300 1 127 2.1E-37 T 29-03-2018 CPU03_RS05635 1f0f8565f31a11db768e0192be2c88e5 711 Pfam PF10145 Phage-related minor tail protein 86 285 3.3E-19 T 29-03-2018 IPR010090 Phage tail tape measure protein CPU03_RS05635 1f0f8565f31a11db768e0192be2c88e5 711 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 60 390 5.5E-22 T 29-03-2018 IPR010090 Phage tail tape measure protein CPU03_RS05635 1f0f8565f31a11db768e0192be2c88e5 711 Gene3D G3DSA:1.20.5.1230 5 624 3.0E-9 T 29-03-2018 CPU03_RS04250 8aedfd447532aac9112d9be411f721f8 372 PIRSF PIRSF028774 1 358 5.2E-187 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CPU03_RS04250 8aedfd447532aac9112d9be411f721f8 372 Pfam PF01728 FtsJ-like methyltransferase 186 260 1.0E-7 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CPU03_RS04250 8aedfd447532aac9112d9be411f721f8 372 SUPERFAMILY SSF53335 184 295 1.8E-14 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS04250 8aedfd447532aac9112d9be411f721f8 372 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 354 84.542 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CPU03_RS04250 8aedfd447532aac9112d9be411f721f8 372 Gene3D G3DSA:3.40.50.150 176 356 2.0E-23 T 29-03-2018 CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 Gene3D G3DSA:1.20.120.530 81 233 2.2E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 Pfam PF07729 FCD domain 93 216 1.5E-19 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 SMART SM00895 93 217 9.3E-17 T 29-03-2018 IPR011711 GntR, C-terminal CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 SMART SM00345 10 69 4.0E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 SUPERFAMILY SSF48008 91 223 1.26E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 4.6E-23 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 SUPERFAMILY SSF46785 4 73 1.17E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.4E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CPU03_RS05880 0b4057ef17d109977670f2d47b34e56d 255 Gene3D G3DSA:1.10.10.10 1 71 1.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 Hamap MF_00611 Protein FdhE [fdhE]. 3 307 46.728 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 Gene3D G3DSA:3.90.1670.10 25 308 8.3E-97 T 29-03-2018 IPR024064 FdhE-like CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 305 6.4E-113 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 SUPERFAMILY SSF144020 25 306 1.22E-93 T 29-03-2018 IPR024064 FdhE-like CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 PIRSF PIRSF018296 1 308 2.9E-124 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CPU03_RS08885 9c5c650415dc5cca51bf6fa7e2e3dd53 308 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 306 7.8E-116 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 PIRSF PIRSF036917 1 674 0.0 T 29-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 SMART SM00642 191 635 6.6E-76 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 Pfam PF00128 Alpha amylase, catalytic domain 439 593 8.6E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 Pfam PF00128 Alpha amylase, catalytic domain 224 371 2.2E-24 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 Gene3D G3DSA:2.60.40.1180 121 168 0.039 T 29-03-2018 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 Gene3D G3DSA:3.20.20.80 171 325 1.8E-42 T 29-03-2018 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 Gene3D G3DSA:3.20.20.80 326 640 9.7E-33 T 29-03-2018 CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 SUPERFAMILY SSF51445 372 641 5.49E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS16155 67f93a32524cfb43eab26b9e9917df4e 675 SUPERFAMILY SSF51445 178 316 5.49E-73 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS02250 0e7a4f729eef683eeaa3838c2e30aee8 140 Pfam PF05130 FlgN protein 7 129 1.1E-19 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CPU03_RS02250 0e7a4f729eef683eeaa3838c2e30aee8 140 Gene3D G3DSA:1.20.58.300 5 114 1.1E-15 T 29-03-2018 CPU03_RS02250 0e7a4f729eef683eeaa3838c2e30aee8 140 SUPERFAMILY SSF140566 7 114 2.75E-16 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CPU03_RS16745 2edf030759b2d615d8e030e852704f0a 261 SUPERFAMILY SSF52540 5 233 5.72E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16745 2edf030759b2d615d8e030e852704f0a 261 Gene3D G3DSA:3.40.50.300 1 240 3.4E-58 T 29-03-2018 CPU03_RS16745 2edf030759b2d615d8e030e852704f0a 261 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS16745 2edf030759b2d615d8e030e852704f0a 261 Pfam PF00005 ABC transporter 23 171 2.0E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS16745 2edf030759b2d615d8e030e852704f0a 261 SMART SM00382 31 220 4.7E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08330 e1542a4df20bae9e1433a4cd82ca8fdd 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 9.3E-36 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS08330 e1542a4df20bae9e1433a4cd82ca8fdd 230 SUPERFAMILY SSF75217 4 178 4.71E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS08330 e1542a4df20bae9e1433a4cd82ca8fdd 230 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.81 T 29-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CPU03_RS08330 e1542a4df20bae9e1433a4cd82ca8fdd 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 2.3E-22 T 29-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CPU03_RS08330 e1542a4df20bae9e1433a4cd82ca8fdd 230 Gene3D G3DSA:3.40.1280.10 1 190 1.7E-47 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS11625 08f49e0c72d18dbf7a8b3b802ce7d838 88 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 25 75 1.8E-22 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CPU03_RS11625 08f49e0c72d18dbf7a8b3b802ce7d838 88 Gene3D G3DSA:1.10.10.10 30 87 1.5E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06965 37f4e27bf4d0284e0b4d21b8f27037f7 275 Gene3D G3DSA:3.60.21.10 3 270 1.6E-39 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS06965 37f4e27bf4d0284e0b4d21b8f27037f7 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 6.0E-20 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CPU03_RS06965 37f4e27bf4d0284e0b4d21b8f27037f7 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 3.3E-18 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CPU03_RS06965 37f4e27bf4d0284e0b4d21b8f27037f7 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 41.056 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CPU03_RS06965 37f4e27bf4d0284e0b4d21b8f27037f7 275 SUPERFAMILY SSF56300 14 260 2.13E-62 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS08410 25483a8762b8281f5024716e8aaf8209 159 PIRSF PIRSF034445 1 148 9.3E-25 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS08410 25483a8762b8281f5024716e8aaf8209 159 Pfam PF07813 LTXXQ motif family protein 43 137 9.7E-18 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 Gene3D G3DSA:2.170.130.10 21 162 1.8E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 676 693 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 155 3.1E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 Pfam PF00593 TonB dependent receptor 232 692 6.9E-39 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 SUPERFAMILY SSF56935 29 693 3.05E-106 T 29-03-2018 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 Gene3D G3DSA:2.40.170.20 169 693 6.1E-67 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS15110 4706e9ee701d3d2912268a8ed6f91ddb 693 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 47 693 1.6E-84 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CPU03_RS00980 09a676163fcc1b203046b0f5bd1f9c3c 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.061 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CPU03_RS00980 09a676163fcc1b203046b0f5bd1f9c3c 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 2.1E-68 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CPU03_RS00980 09a676163fcc1b203046b0f5bd1f9c3c 179 Pfam PF04279 Intracellular septation protein A 1 175 1.5E-69 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CPU03_RS17105 ea2f621992d02cc2fc271a63f1ea2257 179 Gene3D G3DSA:3.40.30.10 39 179 1.4E-7 T 29-03-2018 CPU03_RS17105 ea2f621992d02cc2fc271a63f1ea2257 179 SUPERFAMILY SSF52833 43 167 5.16E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS17105 ea2f621992d02cc2fc271a63f1ea2257 179 Pfam PF13728 F plasmid transfer operon protein 69 156 6.5E-8 T 29-03-2018 CPU03_RS17105 ea2f621992d02cc2fc271a63f1ea2257 179 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 6 169 5.6E-51 T 29-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CPU03_RS07840 8aa23c0ed04c75754b2ff68d457ced59 185 Gene3D G3DSA:1.20.5.810 10 42 2.4E-11 T 29-03-2018 CPU03_RS07840 8aa23c0ed04c75754b2ff68d457ced59 185 SUPERFAMILY SSF69118 1 182 1.87E-46 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS07840 8aa23c0ed04c75754b2ff68d457ced59 185 Gene3D G3DSA:1.20.1290.10 43 179 1.9E-19 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS12160 5f0458af56d4c3758cabc817834e929f 343 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 42 322 6.0E-126 T 29-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 CPU03_RS12160 5f0458af56d4c3758cabc817834e929f 343 Pfam PF03824 High-affinity nickel-transport protein 39 327 2.3E-90 T 29-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CPU03_RS08815 5d1d96ab7d0b013a6be34a3a81337489 330 SUPERFAMILY SSF53822 31 328 4.71E-65 T 29-03-2018 IPR028082 Periplasmic binding protein-like I CPU03_RS08815 5d1d96ab7d0b013a6be34a3a81337489 330 Gene3D G3DSA:3.40.50.2300 29 146 7.7E-20 T 29-03-2018 CPU03_RS08815 5d1d96ab7d0b013a6be34a3a81337489 330 Gene3D G3DSA:3.40.50.2300 147 301 2.6E-14 T 29-03-2018 CPU03_RS08815 5d1d96ab7d0b013a6be34a3a81337489 330 Pfam PF13407 Periplasmic binding protein domain 33 290 3.4E-54 T 29-03-2018 IPR025997 Periplasmic binding protein CPU03_RS17300 4b48117d6743102cff085190386835eb 100 Gene3D G3DSA:1.10.1220.10 42 84 1.0E-4 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS12235 f64316eb0a127487318bb8e7b695b5fa 222 Pfam PF04390 Lipopolysaccharide-assembly 43 172 5.2E-14 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CPU03_RS12235 f64316eb0a127487318bb8e7b695b5fa 222 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 177 26.858 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CPU03_RS12235 f64316eb0a127487318bb8e7b695b5fa 222 Gene3D G3DSA:3.30.160.150 20 186 6.3E-51 T 29-03-2018 CPU03_RS02585 0c18ee2a504074512f116ed56d667a31 113 Gene3D G3DSA:3.40.1260.10 1 113 4.1E-26 T 29-03-2018 CPU03_RS02585 0c18ee2a504074512f116ed56d667a31 113 SUPERFAMILY SSF75169 4 113 3.03E-23 T 29-03-2018 IPR027396 DsrEFH-like CPU03_RS02585 0c18ee2a504074512f116ed56d667a31 113 Pfam PF02635 DsrE/DsrF-like family 7 113 6.1E-12 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CPU03_RS15585 6e11b6945e2f91be147937417b199de4 131 Pfam PF03061 Thioesterase superfamily 30 101 1.2E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CPU03_RS15585 6e11b6945e2f91be147937417b199de4 131 Gene3D G3DSA:3.10.129.10 7 130 5.1E-34 T 29-03-2018 CPU03_RS15585 6e11b6945e2f91be147937417b199de4 131 SUPERFAMILY SSF54637 12 129 1.87E-33 T 29-03-2018 IPR029069 HotDog domain CPU03_RS16090 f5ce9f26b673bc548b57ef3779e96737 268 Gene3D G3DSA:2.60.120.380 55 163 4.2E-11 T 29-03-2018 CPU03_RS03220 b28355cf929f735477f3ad1d6e53c7b3 179 Gene3D G3DSA:1.20.5.50 2 179 0.0048 T 29-03-2018 CPU03_RS03220 b28355cf929f735477f3ad1d6e53c7b3 179 Pfam PF07445 Primosomal replication protein priC 8 175 1.0E-50 T 29-03-2018 IPR010890 Primosomal replication PriB/PriC CPU03_RS02230 5904252d4fde5d830e903fb1389dd591 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CPU03_RS02230 5904252d4fde5d830e903fb1389dd591 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 6.7E-12 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CPU03_RS02230 5904252d4fde5d830e903fb1389dd591 134 Pfam PF00460 Flagella basal body rod protein 7 37 5.3E-10 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CPU03_RS02230 5904252d4fde5d830e903fb1389dd591 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 5.2E-52 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CPU03_RS00205 d6f75f032726d0954b5ee78900f9cb72 168 Pfam PF07471 Phage DNA packaging protein Nu1 6 149 4.3E-16 T 29-03-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit CPU03_RS09350 3f1ab29e412b9d806ab8f879e6f8d495 96 SUPERFAMILY SSF75169 1 96 9.57E-24 T 29-03-2018 IPR027396 DsrEFH-like CPU03_RS09350 3f1ab29e412b9d806ab8f879e6f8d495 96 Gene3D G3DSA:3.40.1260.10 1 94 2.1E-18 T 29-03-2018 CPU03_RS09350 3f1ab29e412b9d806ab8f879e6f8d495 96 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 96 1.5E-24 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CPU03_RS09350 3f1ab29e412b9d806ab8f879e6f8d495 96 Pfam PF04077 DsrH like protein 7 92 1.1E-22 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CPU03_RS16740 120b2da6e7b423f3f6165b9f80253eb1 333 Pfam PF01032 FecCD transport family 16 325 2.4E-95 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CPU03_RS16740 120b2da6e7b423f3f6165b9f80253eb1 333 SUPERFAMILY SSF81345 4 325 1.16E-86 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS16740 120b2da6e7b423f3f6165b9f80253eb1 333 Gene3D G3DSA:1.10.3470.10 1 332 1.1E-71 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS11295 a9534d06d7df2a1f0a625d561576e80f 128 Pfam PF01592 NifU-like N terminal domain 2 126 3.5E-57 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CPU03_RS11295 a9534d06d7df2a1f0a625d561576e80f 128 SUPERFAMILY SSF82649 1 125 4.97E-49 T 29-03-2018 CPU03_RS11295 a9534d06d7df2a1f0a625d561576e80f 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.0E-69 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CPU03_RS11295 a9534d06d7df2a1f0a625d561576e80f 128 Gene3D G3DSA:3.90.1010.10 1 128 3.1E-52 T 29-03-2018 CPU03_RS06175 48743da23019949660b9d93fa1064733 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 9.0E-25 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CPU03_RS06175 48743da23019949660b9d93fa1064733 68 Gene3D G3DSA:3.30.1910.10 1 62 1.3E-30 T 29-03-2018 CPU03_RS06175 48743da23019949660b9d93fa1064733 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 6.0E-30 T 29-03-2018 IPR009491 Protein of unknown function DUF1107 CPU03_RS12035 02e4acd31d80c0ddba2757cb974d10e6 178 SUPERFAMILY SSF49401 25 178 1.99E-35 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS12035 02e4acd31d80c0ddba2757cb974d10e6 178 Gene3D G3DSA:2.60.40.1090 24 178 2.0E-30 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12035 02e4acd31d80c0ddba2757cb974d10e6 178 Pfam PF00419 Fimbrial protein 27 177 3.8E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS01330 d1c990da9fb16b435fecf9a5864b0a70 203 Pfam PF03843 Outer membrane lipoprotein Slp family 21 172 9.8E-47 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS01330 d1c990da9fb16b435fecf9a5864b0a70 203 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 16 178 2.0E-55 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS01330 d1c990da9fb16b435fecf9a5864b0a70 203 PIRSF PIRSF004982 6 192 1.3E-45 T 29-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CPU03_RS12765 70f37ceaf14ebc697b1937a320a0f683 301 PIRSF PIRSF016660 1 298 1.9E-118 T 29-03-2018 IPR008526 Inner membrane protein YedI CPU03_RS12765 70f37ceaf14ebc697b1937a320a0f683 301 Pfam PF05661 Protein of unknown function (DUF808) 4 290 2.1E-114 T 29-03-2018 IPR008526 Inner membrane protein YedI CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 98 104 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 SUPERFAMILY SSF53335 66 259 4.36E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 SUPERFAMILY SSF53335 304 387 4.36E-61 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 Gene3D G3DSA:3.40.50.150 72 387 1.7E-50 T 29-03-2018 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 135 154 1.5E-20 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 347 361 1.5E-20 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 324 346 1.5E-20 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 95 107 1.5E-20 T 29-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CPU03_RS11480 762d7984e3bbb66049c6adc11bb60d37 438 Pfam PF01555 DNA methylase 95 376 1.3E-48 T 29-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 SUPERFAMILY SSF52172 2 188 5.12E-42 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 Gene3D G3DSA:3.40.50.2300 2 118 3.1E-38 T 29-03-2018 CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 Gene3D G3DSA:1.10.10.10 119 231 1.5E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 SMART SM00448 2 111 6.8E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 SMART SM00862 152 228 1.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS08405 289bac1ec1a31e068e673e4cb0d0ecfd 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 9.0E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS11850 a69e157be2fb7f60c29078455d06782c 228 SUPERFAMILY SSF52540 6 227 3.15E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS11850 a69e157be2fb7f60c29078455d06782c 228 Pfam PF00005 ABC transporter 27 174 7.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS11850 a69e157be2fb7f60c29078455d06782c 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS11850 a69e157be2fb7f60c29078455d06782c 228 SMART SM00382 35 223 2.2E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS11850 a69e157be2fb7f60c29078455d06782c 228 Gene3D G3DSA:3.40.50.300 2 228 3.9E-59 T 29-03-2018 CPU03_RS12245 9c0c62e45b8fe1469de32c172b952f03 160 Pfam PF07295 Zinc-ribbon containing domain 15 157 1.5E-51 T 29-03-2018 IPR009912 Zinc-ribbon containing domain CPU03_RS12410 ee6902834998081d07c0b59c601ea8e9 92 Gene3D G3DSA:1.10.1220.10 38 88 1.3E-5 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CPU03_RS12410 ee6902834998081d07c0b59c601ea8e9 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 86 4.4E-7 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CPU03_RS03610 df89b6a08df43809dbace8964ff717c6 493 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 442 1.7E-67 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS03610 df89b6a08df43809dbace8964ff717c6 493 Pfam PF00474 Sodium:solute symporter family 38 442 7.5E-43 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Gene3D G3DSA:3.40.1390.10 2 104 9.7E-24 T 29-03-2018 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Gene3D G3DSA:3.90.190.20 343 494 1.5E-47 T 29-03-2018 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Pfam PF08245 Mur ligase middle domain 114 318 3.5E-49 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 SUPERFAMILY SSF53244 339 491 1.31E-49 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 SUPERFAMILY SSF53623 105 337 1.44E-75 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.131 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 8.4E-160 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 3.4E-12 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Gene3D G3DSA:3.40.1190.10 105 342 7.1E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 6.1E-25 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CPU03_RS04695 a854095046df516195cce9c8d2edcb92 495 SUPERFAMILY SSF63418 5 103 1.06E-22 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CPU03_RS03040 24e425a67aa71bbf8b25b2bda59a14ee 453 Gene3D G3DSA:3.20.20.70 5 172 3.2E-5 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS03040 24e425a67aa71bbf8b25b2bda59a14ee 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 5.8E-21 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal CPU03_RS03040 24e425a67aa71bbf8b25b2bda59a14ee 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS03040 24e425a67aa71bbf8b25b2bda59a14ee 453 Pfam PF01136 Peptidase family U32 76 343 2.5E-96 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 SUPERFAMILY SSF52833 25 139 1.01E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 Gene3D G3DSA:3.40.30.10 33 143 7.1E-32 T 29-03-2018 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 PIRSF PIRSF000077 35 139 7.8E-30 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 PRINTS PR00421 Thioredoxin family signature 55 63 1.6E-7 T 29-03-2018 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 PRINTS PR00421 Thioredoxin family signature 103 114 1.6E-7 T 29-03-2018 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 PRINTS PR00421 Thioredoxin family signature 63 72 1.6E-7 T 29-03-2018 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 Pfam PF00085 Thioredoxin 37 137 3.2E-25 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CPU03_RS05030 7f840388181f8aa43a2a036c94db094e 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 3.1E-32 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.8E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 SUPERFAMILY SSF89360 8 103 7.98E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 8.5E-21 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 Gene3D G3DSA:2.60.300.12 8 114 2.7E-38 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CPU03_RS11495 fc3a7123c88f0545e69fb97d25887b74 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.6 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CPU03_RS08680 840545c9b41da0416c5ca825518e1ea8 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 16 55 1.1E-7 T 29-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CPU03_RS07545 74621738b5de6445f3b97152dc59a8cf 96 Gene3D G3DSA:3.30.70.260 4 83 2.1E-8 T 29-03-2018 CPU03_RS07545 74621738b5de6445f3b97152dc59a8cf 96 Pfam PF13710 ACT domain 17 78 8.8E-26 T 29-03-2018 CPU03_RS07545 74621738b5de6445f3b97152dc59a8cf 96 SUPERFAMILY SSF55021 8 79 9.16E-12 T 29-03-2018 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 SUPERFAMILY SSF52733 10 346 1.57E-106 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 Gene3D G3DSA:1.10.1610.10 9 75 4.0E-28 T 29-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 Pfam PF02277 Phosphoribosyltransferase 15 348 3.4E-117 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 17 351 32.267 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 19 348 4.0E-115 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00370 f3f3792354c74c82ab3fb435ffca2a98 354 Gene3D G3DSA:3.40.50.10210 76 332 2.2E-91 T 29-03-2018 CPU03_RS14200 e2e0ec1b69f6d5851b234f255e4194a0 125 Pfam PF00085 Thioredoxin 25 124 5.8E-13 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 CPU03_RS14200 e2e0ec1b69f6d5851b234f255e4194a0 125 Gene3D G3DSA:3.40.30.10 21 125 6.3E-19 T 29-03-2018 CPU03_RS14200 e2e0ec1b69f6d5851b234f255e4194a0 125 SUPERFAMILY SSF52833 21 124 4.32E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS01785 d0befdf842da51a3aade74b542f0803b 332 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 1.8E-18 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain CPU03_RS01785 d0befdf842da51a3aade74b542f0803b 332 Pfam PF00691 OmpA family 161 255 2.9E-12 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS01785 d0befdf842da51a3aade74b542f0803b 332 SUPERFAMILY SSF103088 157 265 1.83E-18 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS01785 d0befdf842da51a3aade74b542f0803b 332 Gene3D G3DSA:3.30.1330.60 108 297 1.2E-35 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 Hamap MF_00215 Pantothenate kinase [coaA]. 1 315 186.032 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 Gene3D G3DSA:3.40.50.300 8 315 2.9E-51 T 29-03-2018 CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 89 242 8.2E-14 T 29-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 9 315 2.8E-166 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 PIRSF PIRSF000545 1 315 5.1E-146 T 29-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CPU03_RS07125 fff30a612a345af6366d8add66e06a32 315 SUPERFAMILY SSF52540 9 314 6.2E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 170 1.1E-52 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 Gene3D G3DSA:3.40.50.1580 176 469 4.0E-61 T 29-03-2018 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 SUPERFAMILY SSF53167 11 486 1.96E-153 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 Gene3D G3DSA:3.30.1730.10 8 172 4.0E-52 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 Hamap MF_01932 AMP nucleosidase [amn]. 5 486 58.456 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 Pfam PF01048 Phosphorylase superfamily 272 434 4.6E-18 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS00505 f97f5611df5a1f6dbc7ea0b03ff17abb 486 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 12 486 4.0E-224 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CPU03_RS13225 d98dfeb27fbaf60500c8283953fe0ffb 181 SUPERFAMILY SSF56300 1 161 2.31E-35 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS13225 d98dfeb27fbaf60500c8283953fe0ffb 181 Gene3D G3DSA:3.60.21.10 1 180 1.2E-27 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS13225 d98dfeb27fbaf60500c8283953fe0ffb 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 157 4.6E-22 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CPU03_RS13225 d98dfeb27fbaf60500c8283953fe0ffb 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 167 1.1E-37 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CPU03_RS13225 d98dfeb27fbaf60500c8283953fe0ffb 181 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 29-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site CPU03_RS13975 8d320a927e38d9fbed1606d5480afdf1 343 Pfam PF00419 Fimbrial protein 187 343 8.7E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS13975 8d320a927e38d9fbed1606d5480afdf1 343 Gene3D G3DSA:2.60.40.1090 185 343 2.2E-15 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS13975 8d320a927e38d9fbed1606d5480afdf1 343 SUPERFAMILY SSF49401 197 343 1.39E-10 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS16770 c3653ac2110a763420538bc1e7cd5e09 341 SUPERFAMILY SSF81345 13 334 1.96E-78 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS16770 c3653ac2110a763420538bc1e7cd5e09 341 Pfam PF01032 FecCD transport family 31 333 3.7E-82 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CPU03_RS16770 c3653ac2110a763420538bc1e7cd5e09 341 Gene3D G3DSA:1.10.3470.10 16 340 4.3E-56 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS16770 c3653ac2110a763420538bc1e7cd5e09 341 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 10 336 32.015 T 29-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 CPU03_RS10820 a7dfbcc56e893cf6a2b234a57b309e96 375 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 189 351 2.1E-36 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CPU03_RS10820 a7dfbcc56e893cf6a2b234a57b309e96 375 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 159 370 4.9E-93 T 29-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CPU03_RS10820 a7dfbcc56e893cf6a2b234a57b309e96 375 Gene3D G3DSA:3.40.50.300 187 348 1.5E-22 T 29-03-2018 CPU03_RS10820 a7dfbcc56e893cf6a2b234a57b309e96 375 SUPERFAMILY SSF52540 159 369 7.31E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12780 13c0ebf8639dd4aeea22b52e7f6323c0 398 SUPERFAMILY SSF53697 19 377 4.96E-54 T 29-03-2018 CPU03_RS12780 13c0ebf8639dd4aeea22b52e7f6323c0 398 Gene3D G3DSA:3.40.50.10490 12 200 8.5E-28 T 29-03-2018 CPU03_RS12780 13c0ebf8639dd4aeea22b52e7f6323c0 398 Gene3D G3DSA:3.40.50.10490 201 380 5.8E-18 T 29-03-2018 CPU03_RS12780 13c0ebf8639dd4aeea22b52e7f6323c0 398 Pfam PF01380 SIS domain 54 191 1.6E-13 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS12780 13c0ebf8639dd4aeea22b52e7f6323c0 398 Pfam PF01380 SIS domain 229 356 5.6E-11 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS11005 7e16ddd6aaa20c9a33a820b62c6990e7 311 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 2.4E-110 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS11005 7e16ddd6aaa20c9a33a820b62c6990e7 311 SUPERFAMILY SSF56601 6 309 7.1E-107 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS11005 7e16ddd6aaa20c9a33a820b62c6990e7 311 Gene3D G3DSA:3.40.710.10 2 311 2.9E-108 T 29-03-2018 CPU03_RS11005 7e16ddd6aaa20c9a33a820b62c6990e7 311 Pfam PF04960 Glutaminase 25 309 2.0E-101 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS11005 7e16ddd6aaa20c9a33a820b62c6990e7 311 Hamap MF_00313 Glutaminase [glsA]. 4 309 42.846 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CPU03_RS10810 314260080f8ed9eef3051a410c266eae 372 Pfam PF01924 Hydrogenase formation hypA family 13 367 1.3E-153 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CPU03_RS10810 314260080f8ed9eef3051a410c266eae 372 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 369 7.4E-160 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CPU03_RS10810 314260080f8ed9eef3051a410c266eae 372 PIRSF PIRSF005622 1 372 2.6E-158 T 29-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 SUPERFAMILY SSF52172 1 177 7.7E-37 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 SMART SM00862 145 216 4.3E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 Gene3D G3DSA:1.10.10.10 122 219 1.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 Gene3D G3DSA:3.40.50.2300 1 121 4.5E-34 T 29-03-2018 CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 Pfam PF00072 Response regulator receiver domain 3 112 3.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.3E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS05810 19c99fa11e5b1c0228d4adc049269dee 219 SMART SM00448 1 112 5.1E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS13050 7987b5dab01d39fa09d02261fb3ee871 255 Pfam PF04333 MlaA lipoprotein 31 225 2.9E-64 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CPU03_RS13050 7987b5dab01d39fa09d02261fb3ee871 255 PRINTS PR01805 VacJ lipoprotein signature 50 66 6.0E-30 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CPU03_RS13050 7987b5dab01d39fa09d02261fb3ee871 255 PRINTS PR01805 VacJ lipoprotein signature 101 118 6.0E-30 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CPU03_RS13050 7987b5dab01d39fa09d02261fb3ee871 255 PRINTS PR01805 VacJ lipoprotein signature 141 158 6.0E-30 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CPU03_RS13050 7987b5dab01d39fa09d02261fb3ee871 255 PRINTS PR01805 VacJ lipoprotein signature 32 45 6.0E-30 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CPU03_RS15385 50f40a0d649428723a6a3ee1d5e48403 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 265 4.5E-6 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15385 50f40a0d649428723a6a3ee1d5e48403 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.8E-138 T 29-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 CPU03_RS15385 50f40a0d649428723a6a3ee1d5e48403 267 Gene3D G3DSA:3.90.850.10 1 267 4.7E-46 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS15385 50f40a0d649428723a6a3ee1d5e48403 267 SUPERFAMILY SSF56529 5 267 4.43E-77 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 5.5E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 5.5E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 5.5E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 Gene3D G3DSA:3.40.710.10 17 305 7.2E-48 T 29-03-2018 CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 SUPERFAMILY SSF56601 11 282 1.16E-60 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS12760 731b837aa4086b6cebb45b1399295bca 309 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 265 8.8E-71 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CPU03_RS05365 fd67f8ba6a24dd8f2134372bacf84e6a 95 SUPERFAMILY SSF69754 2 95 5.49E-36 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS05365 fd67f8ba6a24dd8f2134372bacf84e6a 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.9E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS05365 fd67f8ba6a24dd8f2134372bacf84e6a 95 Gene3D G3DSA:3.30.160.100 1 95 1.2E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS05365 fd67f8ba6a24dd8f2134372bacf84e6a 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.7E-30 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CPU03_RS09305 36dadd56afed0134626ce2bdd7c181c4 186 Gene3D G3DSA:3.40.50.360 1 179 1.9E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS09305 36dadd56afed0134626ce2bdd7c181c4 186 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 48.423 T 29-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CPU03_RS09305 36dadd56afed0134626ce2bdd7c181c4 186 Pfam PF02525 Flavodoxin-like fold 6 171 7.3E-40 T 29-03-2018 IPR003680 Flavodoxin-like fold CPU03_RS09305 36dadd56afed0134626ce2bdd7c181c4 186 SUPERFAMILY SSF52218 6 177 9.08E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 SUPERFAMILY SSF140570 119 281 5.49E-76 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 Pfam PF03882 MukF winged-helix domain 3 117 1.2E-57 T 29-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 Pfam PF17192 MukF middle domain 121 281 4.7E-83 T 29-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 SUPERFAMILY SSF46785 8 118 2.53E-49 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 PIRSF PIRSF018282 1 440 1.2E-243 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.4 T 29-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 Pfam PF17193 MukF C-terminal domain 283 440 5.0E-78 T 29-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CPU03_RS14335 1f19a9600ddae1d7c6d548f2288b52ce 440 Gene3D G3DSA:1.10.10.10 24 116 1.0E-40 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 SUPERFAMILY SSF109998 203 239 1.37E-36 T 29-03-2018 IPR027304 Trigger factor/SurA domain CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 SUPERFAMILY SSF109998 40 169 1.37E-36 T 29-03-2018 IPR027304 Trigger factor/SurA domain CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Gene3D G3DSA:3.10.50.40 384 496 3.1E-9 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Gene3D G3DSA:3.10.50.40 220 383 3.3E-31 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Gene3D G3DSA:3.10.50.40 497 599 0.34 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 SUPERFAMILY SSF54534 225 357 1.05E-22 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Pfam PF13624 SurA N-terminal domain 1 165 8.0E-50 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Pfam PF13145 PPIC-type PPIASE domain 249 370 2.1E-23 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 Gene3D G3DSA:1.10.4030.10 37 171 5.1E-24 T 29-03-2018 CPU03_RS03325 5b6288b338a8e740d2a570f6211b4cbf 626 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 297 318 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CPU03_RS09320 2beb00bf4e44d54ff9f1ef2a67f16a0d 217 SUPERFAMILY SSF54534 2 140 4.3E-34 T 29-03-2018 CPU03_RS09320 2beb00bf4e44d54ff9f1ef2a67f16a0d 217 Gene3D G3DSA:3.10.50.40 1 197 1.4E-27 T 29-03-2018 CPU03_RS09320 2beb00bf4e44d54ff9f1ef2a67f16a0d 217 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 4.3E-10 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CPU03_RS11610 c6eb97727b931318ac9712aab91d2baa 106 Pfam PF17345 Family of unknown function (DUF5375) 2 106 4.9E-61 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CPU03_RS11610 c6eb97727b931318ac9712aab91d2baa 106 ProDom PD070475 P4 PHAGE PROPHAGE-DERIVED CNR-LIKE ORF106 T2655 20 106 2.0E-40 T 29-03-2018 IPR035317 Protein of unknown function DUF5375 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 SUPERFAMILY SSF160527 156 247 9.68E-5 T 29-03-2018 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 Pfam PF02108 Flagellar assembly protein FliH 118 240 1.4E-37 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 136 153 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 154 176 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 222 247 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 74 96 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 177 204 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 21 40 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 116 135 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 97 115 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS14415 120cb5fed2358dd19a9177ec90deb05c 250 PRINTS PR01003 Flagellar assembly protein FliH signature 205 221 1.4E-61 T 29-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CPU03_RS04525 ca8794576c26f8d0606aa84f60b7d23f 298 Pfam PF00892 EamA-like transporter family 157 284 4.8E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS04525 ca8794576c26f8d0606aa84f60b7d23f 298 SUPERFAMILY SSF103481 188 290 1.57E-10 T 29-03-2018 CPU03_RS00095 c0fa3fc981ddfad89eb35fee0c629fa6 905 Pfam PF08400 Prophage tail fibre N-terminal 3 132 1.4E-41 T 29-03-2018 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CPU03_RS00095 c0fa3fc981ddfad89eb35fee0c629fa6 905 Pfam PF03406 Phage tail fibre repeat 349 389 8.7E-17 T 29-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CPU03_RS00095 c0fa3fc981ddfad89eb35fee0c629fa6 905 Gene3D G3DSA:2.60.40.1120 3 148 2.2E-5 T 29-03-2018 CPU03_RS07390 f93fbe8e9737bfa78e2118b21861b909 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 2.4E-41 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07390 f93fbe8e9737bfa78e2118b21861b909 248 Gene3D G3DSA:3.40.50.10090 44 141 5.0E-22 T 29-03-2018 CPU03_RS07390 f93fbe8e9737bfa78e2118b21861b909 248 SUPERFAMILY SSF69618 1 245 2.22E-55 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CPU03_RS07390 f93fbe8e9737bfa78e2118b21861b909 248 Gene3D G3DSA:3.40.50.10090 142 247 3.2E-20 T 29-03-2018 CPU03_RS07390 f93fbe8e9737bfa78e2118b21861b909 248 Gene3D G3DSA:1.10.10.10 4 43 0.44 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS16095 b880cb5b07f4fd2aa953946030f295d5 154 Gene3D G3DSA:3.30.420.130 1 122 2.1E-16 T 29-03-2018 CPU03_RS16095 b880cb5b07f4fd2aa953946030f295d5 154 SUPERFAMILY SSF53146 1 118 5.49E-17 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CPU03_RS16095 b880cb5b07f4fd2aa953946030f295d5 154 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 85 1.6E-8 T 29-03-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CPU03_RS12280 6e8fbeb2def2789730e0749ad0cdd166 509 SUPERFAMILY SSF56317 215 488 2.35E-41 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS12280 6e8fbeb2def2789730e0749ad0cdd166 509 Gene3D G3DSA:3.60.110.10 219 487 1.3E-41 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS12280 6e8fbeb2def2789730e0749ad0cdd166 509 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 456 1.2E-104 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CPU03_RS12280 6e8fbeb2def2789730e0749ad0cdd166 509 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 23.9 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CPU03_RS12280 6e8fbeb2def2789730e0749ad0cdd166 509 Pfam PF00795 Carbon-nitrogen hydrolase 224 475 6.1E-36 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CPU03_RS12560 44e6595e5dec9863b1504a92faed6d08 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.2E-16 T 29-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CPU03_RS12560 44e6595e5dec9863b1504a92faed6d08 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 5.1E-13 T 29-03-2018 IPR012994 Membrane bound YbgT-like CPU03_RS11675 881885c8bba5304aa0ccab301612a491 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.9E-30 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CPU03_RS11675 881885c8bba5304aa0ccab301612a491 144 SUPERFAMILY SSF55961 1 142 7.48E-34 T 29-03-2018 CPU03_RS11675 881885c8bba5304aa0ccab301612a491 144 Gene3D G3DSA:3.30.530.20 1 144 1.4E-31 T 29-03-2018 IPR023393 START-like domain CPU03_RS14740 e59a367f7f2ee7d227ea446112b639d2 314 SUPERFAMILY SSF53067 1 300 5.27E-62 T 29-03-2018 CPU03_RS14740 e59a367f7f2ee7d227ea446112b639d2 314 Gene3D G3DSA:3.30.420.40 1 114 6.2E-22 T 29-03-2018 CPU03_RS14740 e59a367f7f2ee7d227ea446112b639d2 314 Pfam PF00480 ROK family 2 299 1.7E-67 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS14740 e59a367f7f2ee7d227ea446112b639d2 314 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS14740 e59a367f7f2ee7d227ea446112b639d2 314 Gene3D G3DSA:3.30.420.40 115 312 2.2E-55 T 29-03-2018 CPU03_RS05480 c4a94f61ebdc4c33de5dd8d427825c66 261 Gene3D G3DSA:3.40.830.10 2 261 4.6E-80 T 29-03-2018 CPU03_RS05480 c4a94f61ebdc4c33de5dd8d427825c66 261 PIRSF PIRSF006157 1 261 6.7E-86 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CPU03_RS05480 c4a94f61ebdc4c33de5dd8d427825c66 261 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 238 2.1E-28 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CPU03_RS05480 c4a94f61ebdc4c33de5dd8d427825c66 261 SUPERFAMILY SSF53213 6 260 1.11E-83 T 29-03-2018 CPU03_RS00995 adb895096f05fca842f0370bbad42e28 98 Gene3D G3DSA:3.30.70.1060 1 98 1.6E-27 T 29-03-2018 CPU03_RS00995 adb895096f05fca842f0370bbad42e28 98 Pfam PF03795 YCII-related domain 1 94 8.4E-27 T 29-03-2018 IPR005545 YCII-related CPU03_RS00995 adb895096f05fca842f0370bbad42e28 98 SUPERFAMILY SSF54909 1 98 1.04E-29 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS10490 f04f5a041fedeefcca5b719dc7652fbe 446 Gene3D G3DSA:3.30.2290.10 6 232 4.9E-56 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CPU03_RS10490 f04f5a041fedeefcca5b719dc7652fbe 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 2.6E-58 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CPU03_RS10490 f04f5a041fedeefcca5b719dc7652fbe 446 SUPERFAMILY SSF111283 14 446 1.31E-127 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CPU03_RS08135 d7bb8ffd7a2d988fae3fc22a8bbbd609 295 SUPERFAMILY SSF161098 38 285 1.16E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08135 d7bb8ffd7a2d988fae3fc22a8bbbd609 295 Gene3D G3DSA:1.10.3720.10 15 287 1.1E-35 T 29-03-2018 CPU03_RS08135 d7bb8ffd7a2d988fae3fc22a8bbbd609 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 7.0E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08135 d7bb8ffd7a2d988fae3fc22a8bbbd609 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 1.9E-84 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CPU03_RS07910 59af9b56a333cbf470d93eb427330d4f 218 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 28.011 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CPU03_RS07910 59af9b56a333cbf470d93eb427330d4f 218 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 5.8E-74 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CPU03_RS07910 59af9b56a333cbf470d93eb427330d4f 218 Pfam PF01926 50S ribosome-binding GTPase 30 148 2.9E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 CPU03_RS07910 59af9b56a333cbf470d93eb427330d4f 218 Gene3D G3DSA:3.40.50.300 10 212 5.4E-28 T 29-03-2018 CPU03_RS07910 59af9b56a333cbf470d93eb427330d4f 218 SUPERFAMILY SSF52540 26 201 8.07E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12500 e0b2077be3272e97ccfefc302193c8bc 178 SUPERFAMILY SSF55729 6 173 2.2E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS12500 e0b2077be3272e97ccfefc302193c8bc 178 Gene3D G3DSA:3.40.630.30 2 176 6.2E-23 T 29-03-2018 CPU03_RS12500 e0b2077be3272e97ccfefc302193c8bc 178 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 4.6E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS17055 0967f4b1fa33cb78fcdbb65160d8933c 188 PIRSF PIRSF028063 41 179 2.5E-10 T 29-03-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger CPU03_RS17055 0967f4b1fa33cb78fcdbb65160d8933c 188 PIRSF PIRSF028063 1 20 3300.0 T 29-03-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger CPU03_RS17055 0967f4b1fa33cb78fcdbb65160d8933c 188 Pfam PF10881 Protein of unknown function (DUF2726) 59 181 1.5E-23 T 29-03-2018 IPR024402 Domain of unknown function DUF2726 CPU03_RS12825 457ecd7f90a4b8f36075b50fbdd0c78d 496 Gene3D G3DSA:1.20.1050.10 56 244 6.7E-4 T 29-03-2018 CPU03_RS12825 457ecd7f90a4b8f36075b50fbdd0c78d 496 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 67 410 1.8E-86 T 29-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 CPU03_RS12825 457ecd7f90a4b8f36075b50fbdd0c78d 496 PIRSF PIRSF014753 433 493 240.0 T 29-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 CPU03_RS12825 457ecd7f90a4b8f36075b50fbdd0c78d 496 PIRSF PIRSF014753 50 448 1.1E-91 T 29-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 CPU03_RS15625 cc7ed73a0f963076ff39af3421c861d1 79 PIRSF PIRSF037031 2 79 9.4E-30 T 29-03-2018 IPR005243 Redox-active disulphide protein 2 CPU03_RS15625 cc7ed73a0f963076ff39af3421c861d1 79 SUPERFAMILY SSF52833 3 77 2.04E-18 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS15625 cc7ed73a0f963076ff39af3421c861d1 79 Gene3D G3DSA:3.40.30.10 2 78 2.3E-13 T 29-03-2018 CPU03_RS15625 cc7ed73a0f963076ff39af3421c861d1 79 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 2 77 2.2E-22 T 29-03-2018 IPR005243 Redox-active disulphide protein 2 CPU03_RS15625 cc7ed73a0f963076ff39af3421c861d1 79 Pfam PF13192 Thioredoxin domain 4 77 7.1E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS12300 1df9e7d75d86f8b7b469fbf34f21f146 351 SUPERFAMILY SSF52540 117 293 2.0E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12300 1df9e7d75d86f8b7b469fbf34f21f146 351 Gene3D G3DSA:3.40.50.300 114 320 7.2E-28 T 29-03-2018 CPU03_RS12300 1df9e7d75d86f8b7b469fbf34f21f146 351 Pfam PF02562 PhoH-like protein 118 321 1.3E-94 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 CPU03_RS09930 5a1dc9d891c5956e8394a4d1a933f035 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 60 8.7E-17 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CPU03_RS00350 dc8c3608b0ff3e60106ce19a320d9003 268 Gene3D G3DSA:1.10.10.60 122 161 0.0014 T 29-03-2018 CPU03_RS00350 dc8c3608b0ff3e60106ce19a320d9003 268 SUPERFAMILY SSF109709 124 201 1.44E-10 T 29-03-2018 CPU03_RS00350 dc8c3608b0ff3e60106ce19a320d9003 268 SUPERFAMILY SSF110849 24 96 2.46E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin CPU03_RS00350 dc8c3608b0ff3e60106ce19a320d9003 268 Gene3D G3DSA:3.90.1530.10 16 121 3.1E-8 T 29-03-2018 CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 5.0E-73 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 SUPERFAMILY SSF56300 1 336 7.29E-58 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 Gene3D G3DSA:3.60.21.10 1 65 1.6E-16 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 Gene3D G3DSA:3.60.21.10 66 280 6.5E-23 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 281 377 4.1E-21 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CPU03_RS02970 3de18ad038b01f79359b8f437b4d270d 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 229 9.4E-16 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 Pfam PF00263 Bacterial type II and III secretion system protein 238 397 2.0E-39 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR01032 Gene IV protein signature 378 400 4.8E-5 T 29-03-2018 CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR01032 Gene IV protein signature 325 353 4.8E-5 T 29-03-2018 CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR01032 Gene IV protein signature 218 241 4.8E-5 T 29-03-2018 CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 Pfam PF03958 Bacterial type II/III secretion system short domain 111 175 3.7E-9 T 29-03-2018 IPR005644 NolW-like CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR00811 Bacterial general secretion pathway protein D signature 234 258 3.0E-10 T 29-03-2018 IPR001775 GspD/PilQ family CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 380 3.0E-10 T 29-03-2018 IPR001775 GspD/PilQ family CPU03_RS09225 92e85b6a045860810863196bb07ef4c4 400 PRINTS PR00811 Bacterial general secretion pathway protein D signature 385 399 3.0E-10 T 29-03-2018 IPR001775 GspD/PilQ family CPU03_RS04095 b45e7d44749b386289f0a6c89075e873 443 Pfam PF13520 Amino acid permease 7 420 6.6E-38 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS04095 b45e7d44749b386289f0a6c89075e873 443 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 437 1.7E-136 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CPU03_RS04095 b45e7d44749b386289f0a6c89075e873 443 PIRSF PIRSF006060 1 442 1.3E-51 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 Pfam PF08274 PhnA Zinc-Ribbon 2 30 3.0E-15 T 29-03-2018 IPR013987 PhnA protein, N-terminal CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 2.7E-59 T 29-03-2018 IPR004624 PhnA protein CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 Pfam PF03831 PhnA domain 45 112 4.5E-35 T 29-03-2018 IPR013988 PhnA protein, C-terminal CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 Gene3D G3DSA:2.20.25.10 1 39 1.2E-16 T 29-03-2018 CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 SUPERFAMILY SSF57783 1 34 7.48E-14 T 29-03-2018 CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 Gene3D G3DSA:2.30.30.40 44 111 5.2E-38 T 29-03-2018 CPU03_RS12495 6759013a64ad9cccdacefe79719d5081 112 SUPERFAMILY SSF82057 39 111 5.95E-30 T 29-03-2018 CPU03_RS11440 87a94b606c97c98d6314934069ebdc8b 84 Pfam PF13333 Integrase core domain 33 79 5.8E-9 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CPU03_RS03780 98752e5c6ecf98dbc04c78f552b29e49 199 Pfam PF01292 Prokaryotic cytochrome b561 10 198 2.5E-25 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS03780 98752e5c6ecf98dbc04c78f552b29e49 199 SUPERFAMILY SSF81342 4 199 7.14E-37 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS03780 98752e5c6ecf98dbc04c78f552b29e49 199 Gene3D G3DSA:1.20.950.20 1 199 9.2E-39 T 29-03-2018 CPU03_RS02280 96cfa2111d39d48edcbc759f9e6a5c01 262 Pfam PF06167 Glucose-regulated metallo-peptidase M90 17 243 1.0E-60 T 29-03-2018 IPR010384 MtfA family CPU03_RS02280 96cfa2111d39d48edcbc759f9e6a5c01 262 Gene3D G3DSA:3.40.390.10 79 245 8.8E-22 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CPU03_RS02280 96cfa2111d39d48edcbc759f9e6a5c01 262 SUPERFAMILY SSF55486 33 245 3.44E-37 T 29-03-2018 CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 Gene3D G3DSA:3.40.50.300 1 164 7.7E-29 T 29-03-2018 CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 SUPERFAMILY SSF52540 237 359 3.9E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 SUPERFAMILY SSF52540 50 169 3.9E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 SUPERFAMILY SSF57829 422 466 5.68E-6 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 SMART SM00487 1 180 3.9E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 SMART SM00490 263 345 9.8E-11 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 4.9E-24 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 Gene3D G3DSA:3.40.50.300 226 359 3.1E-18 T 29-03-2018 CPU03_RS13640 07e731a7f2318707d59def8e09c1096f 586 Pfam PF00271 Helicase conserved C-terminal domain 248 343 9.8E-13 T 29-03-2018 IPR001650 Helicase, C-terminal CPU03_RS07700 3cdde60ac9f29b92f0da62cd98452d48 112 Pfam PF04219 Protein of unknown function, DUF 10 98 5.1E-38 T 29-03-2018 IPR007335 Protein of unknown function DUF413 CPU03_RS14140 ca8d069dc3b3035ee5b483d3ca1c1740 205 Gene3D G3DSA:2.50.20.10 24 203 3.9E-38 T 29-03-2018 CPU03_RS14140 ca8d069dc3b3035ee5b483d3ca1c1740 205 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 204 1.5E-93 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CPU03_RS14140 ca8d069dc3b3035ee5b483d3ca1c1740 205 SUPERFAMILY SSF89392 26 203 1.02E-53 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CPU03_RS14140 ca8d069dc3b3035ee5b483d3ca1c1740 205 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 202 31.453 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CPU03_RS14140 ca8d069dc3b3035ee5b483d3ca1c1740 205 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 192 4.3E-56 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 22 753 1.8E-144 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 153 7.4E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 Gene3D G3DSA:2.170.130.10 38 167 8.0E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 Gene3D G3DSA:2.40.170.20 168 753 1.8E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 Pfam PF00593 TonB dependent receptor 290 748 5.1E-37 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CPU03_RS01215 12267a76ff9cfe1e3fe11b456a02a2eb 753 SUPERFAMILY SSF56935 45 753 3.55E-76 T 29-03-2018 CPU03_RS13890 c710e4c58a5c032a689e702060a5240a 343 SUPERFAMILY SSF53850 150 268 2.65E-5 T 29-03-2018 CPU03_RS13890 c710e4c58a5c032a689e702060a5240a 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 45 285 2.0E-75 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CPU03_RS13890 c710e4c58a5c032a689e702060a5240a 343 Gene3D G3DSA:3.40.190.10 158 227 0.024 T 29-03-2018 CPU03_RS13890 c710e4c58a5c032a689e702060a5240a 343 PIRSF PIRSF006470 8 339 3.2E-107 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CPU03_RS13890 c710e4c58a5c032a689e702060a5240a 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 46 323 4.9E-90 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CPU03_RS08355 5cfb5f08dc370fcabfbaf68890b6c6c5 310 Pfam PF04748 Divergent polysaccharide deacetylase 28 239 6.0E-79 T 29-03-2018 IPR006837 Divergent polysaccharide deacetylase CPU03_RS08355 5cfb5f08dc370fcabfbaf68890b6c6c5 310 SUPERFAMILY SSF88713 24 239 5.0E-73 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CPU03_RS08355 5cfb5f08dc370fcabfbaf68890b6c6c5 310 Gene3D G3DSA:3.20.20.370 16 242 1.0E-83 T 29-03-2018 CPU03_RS12220 76bd9cadf3694f4ca75fe7767bcd1d5a 105 Gene3D G3DSA:3.30.460.10 1 105 6.0E-34 T 29-03-2018 CPU03_RS12220 76bd9cadf3694f4ca75fe7767bcd1d5a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.1E-37 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CPU03_RS12220 76bd9cadf3694f4ca75fe7767bcd1d5a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.03 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CPU03_RS12220 76bd9cadf3694f4ca75fe7767bcd1d5a 105 SUPERFAMILY SSF81301 4 105 4.41E-37 T 29-03-2018 CPU03_RS12220 76bd9cadf3694f4ca75fe7767bcd1d5a 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.3E-27 T 29-03-2018 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 SUPERFAMILY SSF55120 3 337 1.17E-99 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 339 9.0E-73 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.139 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 172 5.7E-40 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 336 1.4E-16 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CPU03_RS10950 b73af5a4667e5fb923860365ccc0dcda 348 Gene3D G3DSA:3.30.2340.10 166 301 2.7E-28 T 29-03-2018 CPU03_RS11735 28b59bf9399e9b902669ec04116e6b58 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 183 1.1E-22 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CPU03_RS11735 28b59bf9399e9b902669ec04116e6b58 212 PIRSF PIRSF016938 1 204 1.1E-37 T 29-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 CPU03_RS11735 28b59bf9399e9b902669ec04116e6b58 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 1.3E-35 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CPU03_RS11735 28b59bf9399e9b902669ec04116e6b58 212 SUPERFAMILY SSF89069 1 66 1.09E-20 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CPU03_RS15620 3f8fbe2ea18e824e7db98974fa1408d6 47 Pfam PF13708 Domain of unknown function (DUF4942) 1 36 1.4E-5 T 29-03-2018 IPR031339 Domain of unknown function DUF4942 CPU03_RS10780 3f1be4fdc1c95c8b8faec06dd7723b7b 521 Gene3D G3DSA:3.30.1120.10 418 512 1.0E-8 T 29-03-2018 CPU03_RS10780 3f1be4fdc1c95c8b8faec06dd7723b7b 521 Pfam PF00884 Sulfatase 45 390 3.9E-55 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CPU03_RS10780 3f1be4fdc1c95c8b8faec06dd7723b7b 521 Gene3D G3DSA:3.40.720.10 45 412 4.5E-77 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS10780 3f1be4fdc1c95c8b8faec06dd7723b7b 521 SUPERFAMILY SSF53649 44 499 1.57E-93 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS10780 3f1be4fdc1c95c8b8faec06dd7723b7b 521 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 20 2.5E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS13720 4bd83e666462589da246b497844eac8f 331 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 241 320 8.5E-7 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS13720 4bd83e666462589da246b497844eac8f 331 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 170 2.9E-40 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CPU03_RS13720 4bd83e666462589da246b497844eac8f 331 Gene3D G3DSA:3.40.50.300 1 194 1.7E-32 T 29-03-2018 CPU03_RS13720 4bd83e666462589da246b497844eac8f 331 SMART SM00833 239 322 0.0034 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CPU03_RS13720 4bd83e666462589da246b497844eac8f 331 SUPERFAMILY SSF52540 4 185 3.86E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16870 01bab15ff2f4d61d73bea7d98ac0cca1 209 Pfam PF11140 Protein of unknown function (DUF2913) 14 170 2.7E-25 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 CPU03_RS03505 5bbe6ca0820010852d9961bbcfeb05da 425 SUPERFAMILY SSF50182 187 252 1.37E-11 T 29-03-2018 IPR010920 LSM domain CPU03_RS03505 5bbe6ca0820010852d9961bbcfeb05da 425 Gene3D G3DSA:2.30.30.60 203 252 1.1E-9 T 29-03-2018 CPU03_RS03505 5bbe6ca0820010852d9961bbcfeb05da 425 Pfam PF00924 Mechanosensitive ion channel 144 398 6.8E-59 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 Pfam PF00005 ABC transporter 17 165 2.9E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 PIRSF PIRSF039085 1 241 1.5E-101 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 Gene3D G3DSA:3.40.50.300 1 240 1.7E-68 T 29-03-2018 CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 SUPERFAMILY SSF52540 1 235 1.94E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS12260 bb49a0fdd66a66addf7c05db0a22b6b2 241 SMART SM00382 26 213 1.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS03565 8caa2c7b65dba191eb0c65f61105b0aa 94 Pfam PF11115 Protein of unknown function (DUF2623) 1 93 8.2E-42 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 CPU03_RS03565 8caa2c7b65dba191eb0c65f61105b0aa 94 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 91 2.0E-17 T 29-03-2018 IPR022574 Protein of unknown function DUF2623 CPU03_RS02255 9c038ec3f176ebf8f1a363ccdb8d35ea 135 Pfam PF06366 Flagellar protein FlhE 30 135 6.6E-32 T 29-03-2018 IPR009420 Flagellar protein FlhE CPU03_RS16535 0d826d6e3b0fb3edfa4903bbd57ff80b 463 Gene3D G3DSA:3.40.50.1220 290 463 8.4E-91 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS16535 0d826d6e3b0fb3edfa4903bbd57ff80b 463 SUPERFAMILY SSF52467 290 463 4.58E-78 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS16535 0d826d6e3b0fb3edfa4903bbd57ff80b 463 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 1.0E-205 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CPU03_RS16535 0d826d6e3b0fb3edfa4903bbd57ff80b 463 PIRSF PIRSF000204 1 463 5.6E-240 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 SUPERFAMILY SSF52343 103 248 6.02E-38 T 29-03-2018 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 Gene3D G3DSA:3.40.50.80 97 248 2.3E-24 T 29-03-2018 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 2.3E-18 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 3.4E-5 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 SUPERFAMILY SSF63380 3 98 1.13E-24 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CPU03_RS08445 e0fc5f1a81a2125f220171e5dbaea17f 248 Gene3D G3DSA:2.40.30.10 1 95 5.5E-18 T 29-03-2018 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 Gene3D G3DSA:3.40.50.20 15 112 1.7E-22 T 29-03-2018 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 SUPERFAMILY SSF52440 4 112 5.75E-35 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 SUPERFAMILY SSF56059 113 314 6.36E-54 T 29-03-2018 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 50.845 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 Gene3D G3DSA:3.30.1490.20 129 197 3.7E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 Pfam PF02222 ATP-grasp domain 123 294 2.3E-52 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 Gene3D G3DSA:3.30.470.20 198 391 1.5E-34 T 29-03-2018 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 2.4E-180 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CPU03_RS00030 ccc0a3c2f13164bfbc3c64618dfe6dd0 392 SUPERFAMILY SSF51246 319 390 1.57E-15 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 Gene3D G3DSA:3.30.479.10 1 120 9.6E-41 T 29-03-2018 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 119 5.1E-38 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 119 1.8E-35 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 4.4E-34 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 SUPERFAMILY SSF55620 2 119 1.0E-41 T 29-03-2018 CPU03_RS03090 8a3c1db87defd555293481c1a2b58913 120 PIRSF PIRSF006113 1 120 5.6E-55 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CPU03_RS14440 ee4ae0996b80d2c3a609a7b9b397cfa9 120 Pfam PF05400 Flagellar protein FliT 21 106 7.9E-21 T 29-03-2018 IPR008622 Flagellar protein FliT CPU03_RS14440 ee4ae0996b80d2c3a609a7b9b397cfa9 120 Gene3D G3DSA:1.20.58.380 5 90 2.4E-25 T 29-03-2018 CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 164 9.5E-16 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 342 5.7E-37 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 SUPERFAMILY SSF56042 171 341 2.24E-61 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 46.664 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 SUPERFAMILY SSF55326 6 170 3.29E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 Gene3D G3DSA:3.90.650.10 171 346 1.3E-60 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 5.6E-149 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CPU03_RS02935 4d3f12cedd60fbeb3c48c79102db1368 347 Gene3D G3DSA:3.30.1330.10 33 161 2.9E-53 T 29-03-2018 IPR016188 PurM-like, N-terminal domain CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 7.9E-95 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 2.0E-55 T 29-03-2018 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 3.9E-23 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 1.6E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 1.6E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 1.6E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 1.6E-10 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CPU03_RS13355 9f595b888906eb48d118af23741d85e3 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 6.6E-230 T 29-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS00295 9e0b06a61688bdd705865ba204f4d38f 59 Pfam PF13973 Domain of unknown function (DUF4222) 4 58 1.8E-8 T 29-03-2018 IPR025317 Protein of unknown function DUF4222 CPU03_RS02555 d0386d62c9bd7929cfc80e531799bd54 389 Pfam PF04235 Protein of unknown function (DUF418) 227 385 9.5E-44 T 29-03-2018 IPR007349 Domain of unknown function DUF418 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 PIRSF PIRSF001267 1 497 2.6E-173 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 Gene3D G3DSA:3.30.420.150 121 299 3.8E-36 T 29-03-2018 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 Pfam PF02541 Ppx/GppA phosphatase family 21 300 7.6E-95 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 SUPERFAMILY SSF53067 133 300 5.18E-42 T 29-03-2018 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 SUPERFAMILY SSF109604 307 496 1.63E-40 T 29-03-2018 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 SUPERFAMILY SSF53067 7 128 5.18E-37 T 29-03-2018 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 Gene3D G3DSA:3.30.420.40 1 120 1.3E-40 T 29-03-2018 CPU03_RS07505 b53817dceb726ea3bdcb4561f571b64f 500 Gene3D G3DSA:1.10.3210.10 324 463 0.0016 T 29-03-2018 CPU03_RS09115 6e27a03cab0e5a988f07e6cc25c27773 81 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 79 22.127 T 29-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CPU03_RS09115 6e27a03cab0e5a988f07e6cc25c27773 81 SUPERFAMILY SSF46785 1 72 3.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09115 6e27a03cab0e5a988f07e6cc25c27773 81 Gene3D G3DSA:1.10.10.10 1 77 6.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS09115 6e27a03cab0e5a988f07e6cc25c27773 81 Pfam PF09012 FeoC like transcriptional regulator 3 76 2.6E-15 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 Pfam PF00293 NUDIX domain 12 129 6.1E-21 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 SUPERFAMILY SSF55811 8 132 8.12E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CPU03_RS01110 dbe396e114beb2006b606646ef8f6d1b 142 Gene3D G3DSA:3.90.79.10 2 141 1.1E-34 T 29-03-2018 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 Gene3D G3DSA:3.30.160.20 148 226 5.4E-20 T 29-03-2018 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 SUPERFAMILY SSF54768 109 223 5.19E-27 T 29-03-2018 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 Gene3D G3DSA:1.10.1520.10 5 147 4.9E-43 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 SUPERFAMILY SSF69065 5 159 2.09E-49 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 SMART SM00358 156 224 1.0E-22 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 9.1E-14 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 SMART SM00535 21 149 9.8E-56 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 Pfam PF14622 Ribonuclease-III-like 20 142 2.7E-33 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.432 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CPU03_RS11760 74acacbfae887bd5febcf9de7c42db30 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 7.2E-73 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 PIRSF PIRSF009393 1 712 7.4E-289 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Gene3D G3DSA:3.90.1150.10 425 594 1.9E-58 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 SUPERFAMILY SSF55904 567 709 1.7E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.4E-45 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Gene3D G3DSA:3.90.100.10 595 714 7.0E-37 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 SUPERFAMILY SSF53383 130 562 3.35E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.1E-195 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Gene3D G3DSA:3.40.640.10 130 424 1.7E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.6E-29 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CPU03_RS04090 7088128e5e72dad16e24065f22ae81b0 714 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CPU03_RS00635 8e083cadf9ba7c496a49a0f12f137f97 66 Pfam PF10965 Protein of unknown function (DUF2767) 2 63 8.9E-7 T 29-03-2018 IPR024493 Fumarase D CPU03_RS13125 f7292f64302fb78c3389a66cdec5659c 128 Pfam PF13811 Domain of unknown function (DUF4186) 11 117 3.7E-48 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 CPU03_RS13125 f7292f64302fb78c3389a66cdec5659c 128 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 31 105 2.0E-24 T 29-03-2018 IPR020378 Protein of unknown function DUF4186 CPU03_RS04070 9c186656b8f3314d9551efaf17e1aaf1 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 10 83 1.3E-25 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination CPU03_RS04070 9c186656b8f3314d9551efaf17e1aaf1 86 SUPERFAMILY SSF101744 1 84 5.75E-27 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CPU03_RS04070 9c186656b8f3314d9551efaf17e1aaf1 86 Gene3D G3DSA:2.30.30.400 10 83 7.8E-26 T 29-03-2018 CPU03_RS03755 7066ad9f903066d1ce351ffd27e049db 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 312 2.7E-76 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS03755 7066ad9f903066d1ce351ffd27e049db 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CPU03_RS03755 7066ad9f903066d1ce351ffd27e049db 329 Gene3D G3DSA:3.40.50.1100 139 326 1.9E-44 T 29-03-2018 CPU03_RS03755 7066ad9f903066d1ce351ffd27e049db 329 Gene3D G3DSA:3.40.50.1100 36 138 3.8E-28 T 29-03-2018 CPU03_RS03755 7066ad9f903066d1ce351ffd27e049db 329 SUPERFAMILY SSF53686 10 321 9.56E-92 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS16730 9cbd59afb48421f5078090f0ab6c2d2e 348 Gene3D G3DSA:3.40.1570.10 1 182 1.9E-56 T 29-03-2018 CPU03_RS16730 9cbd59afb48421f5078090f0ab6c2d2e 348 SUPERFAMILY SSF144064 5 340 1.86E-127 T 29-03-2018 CPU03_RS16730 9cbd59afb48421f5078090f0ab6c2d2e 348 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 3.3E-42 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CPU03_RS16730 9cbd59afb48421f5078090f0ab6c2d2e 348 Pfam PF05171 Haemin-degrading HemS.ChuX domain 208 340 3.5E-39 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 CPU03_RS16730 9cbd59afb48421f5078090f0ab6c2d2e 348 Gene3D G3DSA:3.40.1570.10 185 345 3.0E-51 T 29-03-2018 CPU03_RS05235 aded908ce0e246a931126119536d354e 223 SUPERFAMILY SSF52833 28 221 2.63E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS05235 aded908ce0e246a931126119536d354e 223 Hamap MF_00932 Thiol:disulfide interchange protein DsbL [dsbL]. 1 223 50.389 T 29-03-2018 IPR028588 Thiol:disulfide interchange protein DsbL CPU03_RS05235 aded908ce0e246a931126119536d354e 223 Pfam PF01323 DSBA-like thioredoxin domain 49 203 5.7E-10 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CPU03_RS05235 aded908ce0e246a931126119536d354e 223 PIRSF PIRSF001488 7 223 1.0E-22 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CPU03_RS05235 aded908ce0e246a931126119536d354e 223 Gene3D G3DSA:3.40.30.10 28 223 3.3E-28 T 29-03-2018 CPU03_RS12400 0603c90dea3b8555cef9e9efb198ad42 154 SUPERFAMILY SSF46785 8 134 1.36E-43 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12400 0603c90dea3b8555cef9e9efb198ad42 154 Pfam PF01475 Ferric uptake regulator family 10 130 4.6E-48 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CPU03_RS12400 0603c90dea3b8555cef9e9efb198ad42 154 Gene3D G3DSA:1.10.10.10 5 88 3.5E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02095 bcb160798b25360eaa625e529e3cc59a 188 SUPERFAMILY SSF159594 23 186 5.49E-30 T 29-03-2018 CPU03_RS02095 bcb160798b25360eaa625e529e3cc59a 188 Gene3D G3DSA:3.40.50.10610 12 188 3.6E-42 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CPU03_RS02095 bcb160798b25360eaa625e529e3cc59a 188 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 181 1.3E-38 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CPU03_RS14195 73a9ac497c960ae9f18c937b86f467ce 242 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 216 2.3E-19 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 Pfam PF00293 NUDIX domain 5 141 2.9E-19 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.6E-46 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.6E-46 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.6E-46 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.6E-46 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.6E-46 T 29-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 SUPERFAMILY SSF55811 3 141 8.94E-25 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS01440 cc6ebfd0e463e3204bf918a526d4afd4 144 Gene3D G3DSA:3.90.79.10 1 144 7.2E-29 T 29-03-2018 CPU03_RS07655 a764caf6271ab7042dcaa7d48b0e22d8 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS07655 a764caf6271ab7042dcaa7d48b0e22d8 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.1E-27 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07655 a764caf6271ab7042dcaa7d48b0e22d8 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.806 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07655 a764caf6271ab7042dcaa7d48b0e22d8 55 SUPERFAMILY SSF57829 1 53 6.71E-20 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CPU03_RS07655 a764caf6271ab7042dcaa7d48b0e22d8 55 Pfam PF00471 Ribosomal protein L33 7 53 5.7E-19 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS16335 f515af25a404bace895d7c07d2e2422e 345 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 344 6.8E-134 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CPU03_RS16335 f515af25a404bace895d7c07d2e2422e 345 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 345 28.126 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CPU03_RS16335 f515af25a404bace895d7c07d2e2422e 345 Pfam PF03116 NQR2, RnfD, RnfE family 6 343 1.0E-105 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CPU03_RS06600 adbc9f775f01b5492ef9a60982d36ff4 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.2E-47 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CPU03_RS06600 adbc9f775f01b5492ef9a60982d36ff4 187 SUPERFAMILY SSF143456 2 187 4.32E-63 T 29-03-2018 CPU03_RS06600 adbc9f775f01b5492ef9a60982d36ff4 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 37.884 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 CPU03_RS06600 adbc9f775f01b5492ef9a60982d36ff4 187 Gene3D G3DSA:3.40.1740.10 112 179 2.1E-11 T 29-03-2018 CPU03_RS06600 adbc9f775f01b5492ef9a60982d36ff4 187 Gene3D G3DSA:3.40.1740.10 1 95 2.1E-28 T 29-03-2018 CPU03_RS06840 140a396c1bf5623160b0f8fac03880f0 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 177 1.4E-54 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CPU03_RS06840 140a396c1bf5623160b0f8fac03880f0 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 14 177 1.0E-53 T 29-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CPU03_RS10230 a023744c77049957943ea673c569eae2 95 Gene3D G3DSA:3.40.50.2300 1 92 6.5E-16 T 29-03-2018 CPU03_RS10230 a023744c77049957943ea673c569eae2 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 3.3E-12 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS10230 a023744c77049957943ea673c569eae2 95 SUPERFAMILY SSF52794 1 86 4.45E-19 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CPU03_RS01830 c86bee8d0a12d6e565f16b1d56d70244 193 Pfam PF00857 Isochorismatase family 10 183 4.1E-37 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS01830 c86bee8d0a12d6e565f16b1d56d70244 193 SUPERFAMILY SSF52499 3 189 4.84E-51 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS01830 c86bee8d0a12d6e565f16b1d56d70244 193 Gene3D G3DSA:3.40.50.850 1 190 4.1E-45 T 29-03-2018 CPU03_RS01995 c6f2a50d1efd9d1d1d6c2bbc2f6bcf44 213 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 202 3.8E-65 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CPU03_RS01995 c6f2a50d1efd9d1d1d6c2bbc2f6bcf44 213 PIRSF PIRSF006324 1 207 3.0E-48 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS01995 c6f2a50d1efd9d1d1d6c2bbc2f6bcf44 213 Pfam PF01810 LysE type translocator 17 206 2.1E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS15795 7ad853ac73fa20c8e645b8716e2b0342 322 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 16 104 2.4E-22 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS15795 7ad853ac73fa20c8e645b8716e2b0342 322 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 5 109 8.9E-21 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 SUPERFAMILY SSF54611 2 141 1.7E-54 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 Gene3D G3DSA:3.10.420.10 1 153 4.1E-57 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 3.4E-68 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 Pfam PF02556 Preprotein translocase subunit SecB 5 144 8.6E-59 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.609 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS08380 d83f32e6a764f7f5d640623ad69e8d84 153 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 7.9E-42 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.5E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.3E-22 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 SUPERFAMILY SSF55594 4 90 2.22E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 Gene3D G3DSA:3.30.1340.10 2 89 1.9E-24 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.0E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 2.0E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS05380 c9dbf2f4946de1f77aba1b73133a9468 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.0E-11 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 SUPERFAMILY SSF52218 1 146 2.1E-40 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 Gene3D G3DSA:3.40.50.360 1 147 3.0E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 PRINTS PR00369 Flavodoxin signature 82 92 1.0E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 PRINTS PR00369 Flavodoxin signature 106 125 1.0E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 PRINTS PR00369 Flavodoxin signature 51 62 1.0E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 PRINTS PR00369 Flavodoxin signature 5 18 1.0E-7 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CPU03_RS08050 9d4f2ff26f40ec928b77e2b5516beb3f 147 Pfam PF00258 Flavodoxin 6 138 1.9E-25 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CPU03_RS10285 4992a5e7f69b6afadb7c228a98251dba 321 Gene3D G3DSA:1.10.3470.10 26 320 3.1E-33 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS10285 4992a5e7f69b6afadb7c228a98251dba 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 307 7.4E-44 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CPU03_RS14325 142954541ef3e86b64323be031deed1a 265 Pfam PF02698 DUF218 domain 81 243 2.9E-24 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CPU03_RS14325 142954541ef3e86b64323be031deed1a 265 Gene3D G3DSA:3.40.50.620 72 214 4.6E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 Gene3D G3DSA:3.20.20.70 102 325 1.0E-18 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 Pfam PF13353 4Fe-4S single cluster domain 111 175 1.7E-6 T 29-03-2018 CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 PIRSF PIRSF004911 1 342 5.2E-119 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 SUPERFAMILY SSF102114 102 324 2.88E-28 T 29-03-2018 CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 334 9.7E-158 T 29-03-2018 IPR022462 Lysine-2,3-aminomutase-like CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.0E-133 T 29-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CPU03_RS06400 ef3aac0f6675084e0da03604f242a009 342 Pfam PF04055 Radical SAM superfamily 118 263 1.6E-8 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS08990 0b8851b24c22187799361e947d1708cc 281 Gene3D G3DSA:1.10.3720.10 3 270 2.9E-34 T 29-03-2018 CPU03_RS08990 0b8851b24c22187799361e947d1708cc 281 SUPERFAMILY SSF161098 4 277 2.15E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08990 0b8851b24c22187799361e947d1708cc 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 276 2.4E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15310 9fcfffa00e1f252b0da7f42bd7c40a18 271 Pfam PF00480 ROK family 4 185 3.5E-57 T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS15310 9fcfffa00e1f252b0da7f42bd7c40a18 271 Gene3D G3DSA:3.30.420.40 2 119 1.4E-24 T 29-03-2018 CPU03_RS15310 9fcfffa00e1f252b0da7f42bd7c40a18 271 Gene3D G3DSA:3.30.420.40 120 270 5.3E-41 T 29-03-2018 CPU03_RS15310 9fcfffa00e1f252b0da7f42bd7c40a18 271 ProSitePatterns PS01125 ROK family signature. 129 156 - T 29-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CPU03_RS15310 9fcfffa00e1f252b0da7f42bd7c40a18 271 SUPERFAMILY SSF53067 1 268 1.6E-52 T 29-03-2018 CPU03_RS03815 e40ceb13f143d94091e6ff7c508ff5c1 214 SUPERFAMILY SSF49401 42 103 7.04E-5 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS03815 e40ceb13f143d94091e6ff7c508ff5c1 214 Gene3D G3DSA:2.60.40.1090 41 214 3.5E-7 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS13230 fc62d38ba50e4d37e4513bb0f7954602 214 Pfam PF00293 NUDIX domain 37 148 4.7E-18 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS13230 fc62d38ba50e4d37e4513bb0f7954602 214 SUPERFAMILY SSF55811 11 168 1.02E-33 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS13230 fc62d38ba50e4d37e4513bb0f7954602 214 Gene3D G3DSA:3.90.79.10 2 179 6.7E-36 T 29-03-2018 CPU03_RS07440 8bb6c83f59659b5abae4d43ce214c0bc 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.773 T 29-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 CPU03_RS07440 8bb6c83f59659b5abae4d43ce214c0bc 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 281 6.4E-9 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 5 197 45.447 T 29-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 SUPERFAMILY SSF109604 5 187 1.14E-46 T 29-03-2018 CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 Gene3D G3DSA:1.10.3210.10 1 201 2.2E-53 T 29-03-2018 CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 82 187 3.0E-38 T 29-03-2018 CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 SMART SM00471 28 153 4.5E-6 T 29-03-2018 IPR003607 HD/PDEase domain CPU03_RS13270 3029a73f9e5800cb9479ede6d4d7ee57 201 Pfam PF13023 HD domain 13 160 5.2E-18 T 29-03-2018 IPR006674 HD domain CPU03_RS10125 cb31d836e89b198737a0963a3645e8f8 199 Pfam PF07916 TraG-like protein, N-terminal region 25 185 3.9E-37 T 29-03-2018 IPR012931 TraG-like, N-terminal CPU03_RS15125 4e8562add08d2133d3e8a24ef31de636 586 Pfam PF06276 Ferric iron reductase FhuF-like transporter 416 572 4.8E-31 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain CPU03_RS15125 4e8562add08d2133d3e8a24ef31de636 586 Pfam PF04183 IucA / IucC family 158 386 2.9E-45 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 Gene3D G3DSA:3.40.50.2300 6 136 9.8E-32 T 29-03-2018 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 SUPERFAMILY SSF52172 9 137 5.41E-38 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 Pfam PF00072 Response regulator receiver domain 18 126 1.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 SMART SM00862 158 234 1.6E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 Gene3D G3DSA:1.10.10.10 137 239 3.2E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 2.8E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 SUPERFAMILY SSF46894 144 235 5.67E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS03030 68ca260cb35ee0ea8ca6a2a180398756 243 SMART SM00448 16 126 6.1E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS02985 df055f0355b430a85c45f64362f185d7 156 SUPERFAMILY SSF55136 1 155 3.92E-31 T 29-03-2018 CPU03_RS02985 df055f0355b430a85c45f64362f185d7 156 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 156 34.626 T 29-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 CPU03_RS02985 df055f0355b430a85c45f64362f185d7 156 Pfam PF06445 GyrI-like small molecule binding domain 1 153 1.3E-23 T 29-03-2018 IPR029442 GyrI-like small molecule binding domain CPU03_RS02985 df055f0355b430a85c45f64362f185d7 156 Gene3D G3DSA:3.20.80.10 1 156 1.0E-22 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain CPU03_RS02985 df055f0355b430a85c45f64362f185d7 156 SMART SM00871 1 154 5.3E-26 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding CPU03_RS16370 c6772d2345fab446dfa506dfa76db6e9 335 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 11 320 7.2E-103 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CPU03_RS16370 c6772d2345fab446dfa506dfa76db6e9 335 PIRSF PIRSF026166 1 335 2.0E-132 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter CPU03_RS03225 c771ef85d5e38e8d97703bc90b916800 83 Pfam PF04226 Transglycosylase associated protein 34 82 8.6E-13 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CPU03_RS15180 501e4e627419e4f8dcf7ef444b74e83a 211 Gene3D G3DSA:3.40.50.360 10 208 1.9E-28 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS15180 501e4e627419e4f8dcf7ef444b74e83a 211 SUPERFAMILY SSF52218 10 204 3.02E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS15180 501e4e627419e4f8dcf7ef444b74e83a 211 Pfam PF02525 Flavodoxin-like fold 11 178 2.3E-30 T 29-03-2018 IPR003680 Flavodoxin-like fold CPU03_RS16325 d99d3c52f662ebfd340dd63d4d965eb1 238 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.552 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CPU03_RS16325 d99d3c52f662ebfd340dd63d4d965eb1 238 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 5.7E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CPU03_RS16325 d99d3c52f662ebfd340dd63d4d965eb1 238 PIRSF PIRSF006102 1 219 1.3E-74 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CPU03_RS16325 d99d3c52f662ebfd340dd63d4d965eb1 238 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 2.2E-82 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CPU03_RS00430 811652125e350aeba0fb57de1801b474 465 Gene3D G3DSA:3.40.50.300 1 395 6.0E-15 T 29-03-2018 CPU03_RS00430 811652125e350aeba0fb57de1801b474 465 Pfam PF04317 YcjX-like family, DUF463 22 464 2.2E-190 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CPU03_RS00430 811652125e350aeba0fb57de1801b474 465 PIRSF PIRSF019381 1 465 3.1E-219 T 29-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CPU03_RS02720 20c1aeb8a2c871f3ae20d614dffa3a7a 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.6E-51 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS02720 20c1aeb8a2c871f3ae20d614dffa3a7a 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS02720 20c1aeb8a2c871f3ae20d614dffa3a7a 169 Gene3D G3DSA:2.70.70.10 9 169 7.8E-59 T 29-03-2018 CPU03_RS02720 20c1aeb8a2c871f3ae20d614dffa3a7a 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.1E-49 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CPU03_RS02720 20c1aeb8a2c871f3ae20d614dffa3a7a 169 SUPERFAMILY SSF51261 11 167 2.96E-56 T 29-03-2018 IPR011055 Duplicated hybrid motif CPU03_RS03585 842e357f159bd2935789d2ac671dc2c2 672 Pfam PF04632 Fusaric acid resistance protein family 20 667 2.4E-167 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CPU03_RS17280 7da9c660f3555d3fd53b8f9788e4a8ce 139 Pfam PF07128 Protein of unknown function (DUF1380) 1 137 3.4E-65 T 29-03-2018 IPR009811 Protein of unknown function DUF1380 CPU03_RS05700 80969865cb8342b613b03dc4bb72b3de 299 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 221 4.0E-45 T 29-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 CPU03_RS08985 752cab4ff5e0cdccb44e8c4a4b547636 294 Gene3D G3DSA:1.10.3720.10 13 294 7.9E-45 T 29-03-2018 CPU03_RS08985 752cab4ff5e0cdccb44e8c4a4b547636 294 SUPERFAMILY SSF161098 56 283 9.81E-53 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08985 752cab4ff5e0cdccb44e8c4a4b547636 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 8.5E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS16890 13475f8dcba759a5db87d9bcd8d4cc8f 109 Gene3D G3DSA:3.30.2310.20 1 84 0.0019 T 29-03-2018 CPU03_RS16890 13475f8dcba759a5db87d9bcd8d4cc8f 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 99 3.0E-22 T 29-03-2018 IPR009241 Toxin HigB-like CPU03_RS06550 c870c36e519b747ede73f4395c28f1ae 140 SUPERFAMILY SSF102546 1 139 4.58E-38 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS06550 c870c36e519b747ede73f4395c28f1ae 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 43.438 T 29-03-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 CPU03_RS06550 c870c36e519b747ede73f4395c28f1ae 140 Pfam PF05025 RbsD / FucU transport protein family 3 139 2.0E-34 T 29-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS06550 c870c36e519b747ede73f4395c28f1ae 140 Gene3D G3DSA:3.40.1650.10 1 140 1.4E-46 T 29-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CPU03_RS11745 79a53c57d89080ab0569b6012e297dd4 158 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 3.5E-33 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CPU03_RS11745 79a53c57d89080ab0569b6012e297dd4 158 PIRSF PIRSF004923 1 151 7.4E-40 T 29-03-2018 IPR026268 Protein RseC CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 SUPERFAMILY SSF53756 2 372 2.37E-139 T 29-03-2018 CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 Gene3D G3DSA:3.40.50.2000 1 204 4.1E-77 T 29-03-2018 CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 7.4E-124 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 65.252 T 29-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 Gene3D G3DSA:3.40.50.2000 205 350 1.4E-44 T 29-03-2018 CPU03_RS07475 f34a74ad9e56be153cbdc2854c7ceadf 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 2.6E-166 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CPU03_RS00395 5fd33ae9afd2ccf55a7553320e51ed3c 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 8.8E-26 T 29-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CPU03_RS00395 5fd33ae9afd2ccf55a7553320e51ed3c 78 PIRSF PIRSF002855 1 78 1.9E-29 T 29-03-2018 IPR016367 Murein-lipoprotein CPU03_RS00395 5fd33ae9afd2ccf55a7553320e51ed3c 78 Gene3D G3DSA:1.20.5.190 22 73 2.6E-18 T 29-03-2018 CPU03_RS00395 5fd33ae9afd2ccf55a7553320e51ed3c 78 SUPERFAMILY SSF58042 24 73 1.02E-22 T 29-03-2018 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 Pfam PF00816 H-NS histone family 32 128 4.9E-20 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 PIRSF PIRSF002096 1 136 9.6E-57 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 SMART SM00528 88 136 4.5E-25 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 SUPERFAMILY SSF81273 94 136 2.9E-12 T 29-03-2018 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 Gene3D G3DSA:1.10.287.1050 1 57 6.4E-26 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 Gene3D G3DSA:4.10.430.10 94 136 6.1E-20 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CPU03_RS01065 203bfa9529d434e3139bb8d575ad83ab 136 SUPERFAMILY SSF81273 2 58 3.53E-18 T 29-03-2018 CPU03_RS17295 dee9dddc4af1b0bca537539eceb2a1f5 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 180 2.9E-12 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CPU03_RS17295 dee9dddc4af1b0bca537539eceb2a1f5 208 PIRSF PIRSF009320 1 208 2.2E-78 T 29-03-2018 CPU03_RS17295 dee9dddc4af1b0bca537539eceb2a1f5 208 SUPERFAMILY SSF52540 1 206 1.16E-34 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS17295 dee9dddc4af1b0bca537539eceb2a1f5 208 Gene3D G3DSA:3.40.50.300 1 207 1.3E-31 T 29-03-2018 CPU03_RS08030 f94c2d30d972d1e73daec1897b85ae47 504 SMART SM00382 38 187 7.5E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS08030 f94c2d30d972d1e73daec1897b85ae47 504 Pfam PF12592 Protein of unknown function (DUF3763) 445 495 4.0E-18 T 29-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 CPU03_RS08030 f94c2d30d972d1e73daec1897b85ae47 504 Gene3D G3DSA:3.40.50.300 3 223 3.0E-17 T 29-03-2018 CPU03_RS08030 f94c2d30d972d1e73daec1897b85ae47 504 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.9E-23 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CPU03_RS08030 f94c2d30d972d1e73daec1897b85ae47 504 SUPERFAMILY SSF52540 21 287 8.16E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 Gene3D G3DSA:3.40.1550.10 48 236 7.9E-38 T 29-03-2018 IPR028976 CheC-like domain CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 SUPERFAMILY SSF103039 51 233 1.15E-19 T 29-03-2018 IPR028976 CheC-like domain CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 Pfam PF02154 Flagellar motor switch protein FliM 40 233 5.3E-76 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 SUPERFAMILY SSF101801 252 325 4.19E-12 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 323 7.9E-110 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 255 323 4.5E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 Gene3D G3DSA:2.30.330.10 241 331 1.1E-14 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 PIRSF PIRSF002888 2 331 8.8E-97 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 215 233 2.3E-31 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 2.3E-31 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.3E-31 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS14390 ab5527d318fa805f384e7742ddc7f0d9 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 2.3E-31 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CPU03_RS16710 db72cffefec2a9b76ffa7379e6b3eefd 176 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 13 162 2.5E-58 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CPU03_RS16710 db72cffefec2a9b76ffa7379e6b3eefd 176 Gene3D G3DSA:3.40.1570.10 8 175 7.6E-36 T 29-03-2018 CPU03_RS16710 db72cffefec2a9b76ffa7379e6b3eefd 176 Pfam PF06228 Haem utilisation ChuX/HutX 28 162 1.1E-29 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CPU03_RS16710 db72cffefec2a9b76ffa7379e6b3eefd 176 PIRSF PIRSF030840 1 168 6.2E-65 T 29-03-2018 IPR010413 Heme utilization carrier protein HutX-like CPU03_RS16710 db72cffefec2a9b76ffa7379e6b3eefd 176 SUPERFAMILY SSF144064 6 165 5.49E-44 T 29-03-2018 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 512 4.0E-14 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Gene3D G3DSA:2.30.38.10 337 421 1.9E-20 T 29-03-2018 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 SUPERFAMILY SSF56801 9 518 2.35E-133 T 29-03-2018 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Pfam PF00501 AMP-binding enzyme 16 428 1.6E-85 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Gene3D G3DSA:3.30.300.30 423 519 4.7E-21 T 29-03-2018 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 180 191 - T 29-03-2018 IPR020845 AMP-binding, conserved site CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Gene3D G3DSA:3.40.50.980 5 185 2.5E-39 T 29-03-2018 CPU03_RS12135 115e0f390cf7dc7642901042a390d77c 519 Gene3D G3DSA:3.40.50.980 186 336 1.5E-32 T 29-03-2018 CPU03_RS02765 cd8343d7e178444b839799603d6a0fac 190 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 6 182 8.8E-54 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CPU03_RS02765 cd8343d7e178444b839799603d6a0fac 190 SUPERFAMILY SSF55811 8 185 2.84E-49 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS02765 cd8343d7e178444b839799603d6a0fac 190 Pfam PF00293 NUDIX domain 42 161 5.0E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS02765 cd8343d7e178444b839799603d6a0fac 190 Gene3D G3DSA:3.90.79.10 1 189 1.5E-34 T 29-03-2018 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.4E-97 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 PIRSF PIRSF001359 1 284 1.0E-108 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 Gene3D G3DSA:3.20.20.70 1 284 3.2E-101 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 SUPERFAMILY SSF51569 1 283 4.54E-96 T 29-03-2018 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 2.2E-96 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CPU03_RS12830 a8df0787a4bccfbc9a82c754d4a2ad58 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 4.0E-149 T 29-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CPU03_RS04810 0a90e729c9bb5a767275b98525c9ce4f 795 Pfam PF03968 OstA-like protein 60 201 2.9E-28 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CPU03_RS04810 0a90e729c9bb5a767275b98525c9ce4f 795 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 22 774 20.928 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CPU03_RS04810 0a90e729c9bb5a767275b98525c9ce4f 795 Gene3D G3DSA:2.60.450.10 51 216 8.4E-18 T 29-03-2018 CPU03_RS04810 0a90e729c9bb5a767275b98525c9ce4f 795 Pfam PF04453 Organic solvent tolerance protein 325 708 2.8E-101 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CPU03_RS03515 ea1993f7d389354a3499008fe641895f 463 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CPU03_RS03515 ea1993f7d389354a3499008fe641895f 463 PIRSF PIRSF006060 1 457 1.2E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03515 ea1993f7d389354a3499008fe641895f 463 Pfam PF00324 Amino acid permease 16 452 8.3E-104 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CPU03_RS05955 bba47623cae473392e7ed5ae2d38b7e4 167 Gene3D G3DSA:3.40.630.30 1 129 9.9E-19 T 29-03-2018 CPU03_RS05955 bba47623cae473392e7ed5ae2d38b7e4 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 123 5.6E-10 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS05955 bba47623cae473392e7ed5ae2d38b7e4 167 SUPERFAMILY SSF55729 1 158 1.46E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS03730 c885148f2a688efd4373cb1965176c66 211 Gene3D G3DSA:3.20.20.70 13 206 1.8E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS03730 c885148f2a688efd4373cb1965176c66 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 201 3.7E-57 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03730 c885148f2a688efd4373cb1965176c66 211 Pfam PF02581 Thiamine monophosphate synthase 20 189 5.1E-56 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03730 c885148f2a688efd4373cb1965176c66 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 207 19.757 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03730 c885148f2a688efd4373cb1965176c66 211 SUPERFAMILY SSF51391 6 204 2.22E-63 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 PIRSF PIRSF029256 1 154 1.2E-70 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.428 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 SUPERFAMILY SSF75217 1 152 1.44E-44 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 5.4E-73 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 Gene3D G3DSA:3.40.1280.10 1 156 1.3E-36 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS08395 e193d55659bfc5d970b69b9b9eea6295 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 9.9E-32 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS15705 18d1965b9418191d540d733b4053ddb7 154 Gene3D G3DSA:3.10.450.160 22 154 9.4E-21 T 29-03-2018 CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 SUPERFAMILY SSF52172 1 175 1.08E-38 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-34 T 29-03-2018 CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 Pfam PF00072 Response regulator receiver domain 3 111 4.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 SMART SM00448 1 112 3.9E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 SMART SM00862 145 216 5.9E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 Gene3D G3DSA:1.10.10.10 127 220 1.7E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS06080 a70b65658f64a145dcc9fbc727d852d5 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.0E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 SUPERFAMILY SSF53254 2 145 2.55E-19 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS13065 bc4146c76738d634662307fde9080493 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 7.7E-9 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 PIRSF PIRSF000709 1 103 6.8E-4 T 29-03-2018 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 PIRSF PIRSF000709 96 115 180.0 T 29-03-2018 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 151 2.0E-46 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 SMART SM00855 2 115 7.9E-5 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CPU03_RS13065 bc4146c76738d634662307fde9080493 158 Gene3D G3DSA:3.40.50.1240 1 155 8.5E-23 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS11415 f350889126da52aca9c4b96c3b5e7d38 127 Pfam PF03918 Cytochrome C biogenesis protein 12 127 4.8E-38 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CPU03_RS14310 073537f8a129ec13e3a5d8abc6bb769c 468 TIGRFAM TIGR03173 pbuX: xanthine permease 31 441 1.0E-154 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CPU03_RS14310 073537f8a129ec13e3a5d8abc6bb769c 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 438 8.0E-124 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS14310 073537f8a129ec13e3a5d8abc6bb769c 468 Pfam PF00860 Permease family 27 406 4.1E-112 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS14310 073537f8a129ec13e3a5d8abc6bb769c 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 355 375 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 Gene3D G3DSA:3.90.1310.10 34 232 1.5E-41 T 29-03-2018 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 SUPERFAMILY SSF56519 60 229 6.8E-44 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 Pfam PF00905 Penicillin binding protein transpeptidase domain 257 551 1.4E-83 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 Gene3D G3DSA:3.40.710.10 233 584 3.0E-78 T 29-03-2018 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 217 5.1E-18 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS04700 931c9eb01079cdae9ad71d6f21c640d0 585 SUPERFAMILY SSF56601 232 560 3.13E-86 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS07395 c07c7999f47dcd67fbad57d196f1b406 388 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 46 374 4.3E-135 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CPU03_RS13165 932002797e0a019af1d539b0d5bdeb86 221 Pfam PF09335 SNARE associated Golgi protein 49 177 8.9E-25 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS03290 4190c40763386e5ca353f3ebcdc550e7 425 Gene3D G3DSA:1.10.3430.10 20 404 6.6E-127 T 29-03-2018 CPU03_RS03290 4190c40763386e5ca353f3ebcdc550e7 425 Pfam PF00909 Ammonium Transporter Family 31 423 1.0E-120 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CPU03_RS03290 4190c40763386e5ca353f3ebcdc550e7 425 ProSitePatterns PS01219 Ammonium transporters signature. 179 204 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CPU03_RS03290 4190c40763386e5ca353f3ebcdc550e7 425 TIGRFAM TIGR00836 amt: ammonium transporter 28 423 7.4E-131 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CPU03_RS03290 4190c40763386e5ca353f3ebcdc550e7 425 SUPERFAMILY SSF111352 25 404 3.66E-123 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 Pfam PF00186 Dihydrofolate reductase 3 159 1.2E-57 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 PIRSF PIRSF000194 1 160 9.1E-57 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 Gene3D G3DSA:3.40.430.10 1 160 5.3E-54 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.8E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.8E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.8E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.8E-14 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CPU03_RS04840 0789788592877b79f7a394e73547f147 160 SUPERFAMILY SSF53597 1 159 5.63E-56 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CPU03_RS02860 74ef5a097f3a53f6f702532b2dbb8275 226 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 178 9.3E-37 T 29-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CPU03_RS02860 74ef5a097f3a53f6f702532b2dbb8275 226 Gene3D G3DSA:3.30.1380.10 4 189 2.6E-31 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS02860 74ef5a097f3a53f6f702532b2dbb8275 226 SUPERFAMILY SSF55166 16 180 1.53E-19 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 9.3E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 9.3E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 9.3E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 9.3E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 9.3E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 SUPERFAMILY SSF46589 1 112 3.82E-32 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 SUPERFAMILY SSF55681 116 424 2.32E-99 T 29-03-2018 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 Gene3D G3DSA:1.10.287.40 2 104 2.7E-25 T 29-03-2018 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 8.4E-181 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 229 406 2.6E-33 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.564 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.1E-31 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 Gene3D G3DSA:3.30.930.10 105 430 3.3E-95 T 29-03-2018 CPU03_RS14150 a8e5ded5d68da050e11d5b9155bdeda3 430 PIRSF PIRSF001529 1 430 1.1E-182 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CPU03_RS15135 04e43c273c67f87ecc85cb7fb0dee210 570 Pfam PF04183 IucA / IucC family 150 355 9.4E-32 T 29-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 CPU03_RS15135 04e43c273c67f87ecc85cb7fb0dee210 570 Pfam PF06276 Ferric iron reductase FhuF-like transporter 380 537 7.1E-19 T 29-03-2018 IPR022770 Ferric iron reductase FhuF domain CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 2.1E-135 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 6.2E-142 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 Gene3D G3DSA:3.40.50.1100 134 314 8.7E-59 T 29-03-2018 CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 8.6E-69 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 Gene3D G3DSA:3.40.50.1100 20 133 9.2E-33 T 29-03-2018 CPU03_RS02705 aec1c95e40dd36e77c7bbd2d934db710 319 SUPERFAMILY SSF53686 3 312 3.54E-97 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 204 1.2E-82 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 SUPERFAMILY SSF52402 1 212 3.53E-68 T 29-03-2018 CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 Pfam PF06508 Queuosine biosynthesis protein QueC 3 211 1.1E-81 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 PIRSF PIRSF006293 1 221 2.3E-81 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 Gene3D G3DSA:3.40.50.620 1 229 1.1E-52 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS03315 f8c6400e773df18c58a8e078c4fd1a7e 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 216 50.854 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CPU03_RS02700 c54b5fd7d2f641b5a476232bad1b7fd4 259 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 15 255 28.807 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CPU03_RS02700 c54b5fd7d2f641b5a476232bad1b7fd4 259 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 21 237 1.9E-41 T 29-03-2018 CPU03_RS16425 f4543c3e82e7bff757bdac8998a6c7c8 286 SUPERFAMILY SSF53474 12 139 1.52E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16425 f4543c3e82e7bff757bdac8998a6c7c8 286 SUPERFAMILY SSF53474 180 286 1.52E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS16425 f4543c3e82e7bff757bdac8998a6c7c8 286 Pfam PF12146 Serine aminopeptidase, S33 26 262 2.4E-20 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 CPU03_RS16425 f4543c3e82e7bff757bdac8998a6c7c8 286 Gene3D G3DSA:3.40.50.1820 2 286 8.9E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS10790 626ba744505eb238e272806a51511f18 417 SUPERFAMILY SSF51419 25 274 1.7E-56 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS10790 626ba744505eb238e272806a51511f18 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 180 373 7.9E-24 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.8E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.8E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 2.8E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 180 193 2.8E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 282 2.8E-19 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CPU03_RS10790 626ba744505eb238e272806a51511f18 417 Gene3D G3DSA:3.20.20.10 42 262 1.3E-47 T 29-03-2018 IPR029066 PLP-binding barrel CPU03_RS10790 626ba744505eb238e272806a51511f18 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 273 4.2E-54 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 Gene3D G3DSA:2.40.37.10 263 417 2.7E-45 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 1.4E-24 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 1.4E-24 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 291 309 1.4E-24 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 155 164 1.4E-24 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 15 415 2.3E-119 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 9 416 37.083 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CPU03_RS10790 626ba744505eb238e272806a51511f18 417 SUPERFAMILY SSF50621 247 416 1.57E-54 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CPU03_RS15065 2a72a8c7fb84e9d4564795954dbc2ef9 261 Gene3D G3DSA:3.40.50.2300 70 261 1.1E-11 T 29-03-2018 CPU03_RS15065 2a72a8c7fb84e9d4564795954dbc2ef9 261 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 242 2.0E-69 T 29-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CPU03_RS15065 2a72a8c7fb84e9d4564795954dbc2ef9 261 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 249 1.8E-47 T 29-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CPU03_RS01960 0eed89f052d8539a7cdd44229a7b4cb0 552 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 551 43.589 T 29-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 CPU03_RS01960 0eed89f052d8539a7cdd44229a7b4cb0 552 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 6 237 4.8E-43 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CPU03_RS01030 8668f54de738d372f5799278e3df6ed6 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 72 1.0E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CPU03_RS01030 8668f54de738d372f5799278e3df6ed6 302 SUPERFAMILY SSF161098 100 283 2.49E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS01030 8668f54de738d372f5799278e3df6ed6 302 Gene3D G3DSA:1.10.3720.10 28 291 6.5E-41 T 29-03-2018 CPU03_RS01030 8668f54de738d372f5799278e3df6ed6 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 4.5E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS16225 e06f0cfc5d518e879772a53218920a59 207 SMART SM00382 28 207 1.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS16225 e06f0cfc5d518e879772a53218920a59 207 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS16225 e06f0cfc5d518e879772a53218920a59 207 SUPERFAMILY SSF52540 6 199 2.41E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS16225 e06f0cfc5d518e879772a53218920a59 207 Gene3D G3DSA:3.40.50.300 1 206 8.7E-45 T 29-03-2018 CPU03_RS16225 e06f0cfc5d518e879772a53218920a59 207 Pfam PF00005 ABC transporter 21 159 1.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS05155 0179ac2475417439766c11bcc2a6383f 235 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.1E-65 T 29-03-2018 IPR019305 Uncharacterised protein family Smp CPU03_RS08965 aa450a98ce5249433d3e5e8220d33d19 421 Pfam PF02447 GntP family permease 9 414 1.1E-22 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS07350 f7a0fa9ddd956c93563e07b1f9c141f9 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 4.1E-12 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07350 f7a0fa9ddd956c93563e07b1f9c141f9 238 Gene3D G3DSA:3.40.50.1000 1 238 1.4E-22 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07350 f7a0fa9ddd956c93563e07b1f9c141f9 238 SUPERFAMILY SSF56784 12 238 1.25E-39 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS07350 f7a0fa9ddd956c93563e07b1f9c141f9 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 199 1.7E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 SUPERFAMILY SSF51735 274 406 1.97E-17 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 Gene3D G3DSA:1.10.287.70 142 248 1.8E-15 T 29-03-2018 CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 Gene3D G3DSA:3.40.50.720 267 390 2.6E-13 T 29-03-2018 CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 Pfam PF07885 Ion channel 181 251 4.1E-14 T 29-03-2018 IPR013099 Potassium channel domain CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 Pfam PF02254 TrkA-N domain 277 390 5.3E-13 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CPU03_RS09960 f3f845e0f421158bdf239e412e7ef92a 428 SUPERFAMILY SSF81324 149 289 2.88E-22 T 29-03-2018 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 11 295 41.421 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 Gene3D G3DSA:3.40.50.620 117 227 8.4E-27 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 199 1.8E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 26 1.8E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 175 185 1.8E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 39 1.8E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 56 1.8E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 11 275 4.9E-113 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 Gene3D G3DSA:3.40.50.620 11 116 2.6E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 SUPERFAMILY SSF52374 11 291 1.07E-88 T 29-03-2018 CPU03_RS04410 e4f564a84c3d9aa9a7b34f6fd8b71262 308 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 260 1.5E-45 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CPU03_RS04075 2bb07f740fc82631c9f9d98d62ef0632 109 SUPERFAMILY SSF46626 4 106 7.59E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS04075 2bb07f740fc82631c9f9d98d62ef0632 109 Pfam PF00034 Cytochrome c 32 104 2.2E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS04075 2bb07f740fc82631c9f9d98d62ef0632 109 Gene3D G3DSA:1.10.760.10 12 103 1.2E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CPU03_RS08245 bda5571000412ab3625cb4ec5b7d4a45 154 SUPERFAMILY SSF49764 31 134 7.67E-17 T 29-03-2018 IPR008978 HSP20-like chaperone CPU03_RS08245 bda5571000412ab3625cb4ec5b7d4a45 154 Pfam PF00011 Hsp20/alpha crystallin family 39 134 1.2E-14 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CPU03_RS08245 bda5571000412ab3625cb4ec5b7d4a45 154 Gene3D G3DSA:2.60.40.790 4 135 3.2E-16 T 29-03-2018 IPR008978 HSP20-like chaperone CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Gene3D G3DSA:3.40.50.970 4 204 4.6E-53 T 29-03-2018 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 SUPERFAMILY SSF52518 7 178 3.44E-30 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Gene3D G3DSA:3.40.50.1220 220 359 7.0E-16 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Gene3D G3DSA:3.40.50.970 360 560 5.3E-27 T 29-03-2018 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 434 6.3E-136 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 PIRSF PIRSF004983 1 560 1.3E-167 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 137 3.2E-28 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 SUPERFAMILY SSF52467 220 357 3.05E-6 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 392 1.6E-81 T 29-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 557 32.106 T 29-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 SUPERFAMILY SSF52518 371 554 3.77E-30 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold CPU03_RS13425 51ebbd89acb266348f7d7272c8559320 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 426 538 2.9E-6 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CPU03_RS05315 d2b0907f68e1052fe356a3b4d8a9bbc4 178 Pfam PF02470 MlaD protein 39 116 3.1E-20 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS05315 d2b0907f68e1052fe356a3b4d8a9bbc4 178 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 152 4.6E-55 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CPU03_RS15315 5b2f5f930f9c4912b4cb1791cfba6ad0 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.9E-54 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS15315 5b2f5f930f9c4912b4cb1791cfba6ad0 155 SUPERFAMILY SSF51197 1 153 6.04E-41 T 29-03-2018 CPU03_RS15315 5b2f5f930f9c4912b4cb1791cfba6ad0 155 Gene3D G3DSA:2.60.120.370 1 153 1.8E-43 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS15315 5b2f5f930f9c4912b4cb1791cfba6ad0 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.3E-38 T 29-03-2018 IPR004375 YhcH/YjgK/YiaL family CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 ProSitePatterns PS01068 OmpA-like domain. 102 146 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 PRINTS PR01021 OMPA domain signature 100 115 3.5E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 PRINTS PR01021 OMPA domain signature 115 131 3.5E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 PRINTS PR01021 OMPA domain signature 70 92 3.5E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 68 170 2.7E-46 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 Gene3D G3DSA:3.30.1330.60 40 170 4.6E-36 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 Pfam PF00691 OmpA family 69 164 3.7E-23 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS12595 26c755607272dd38aaf49e0c1c512068 170 SUPERFAMILY SSF103088 57 169 2.75E-35 T 29-03-2018 IPR006665 OmpA-like domain CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 Gene3D G3DSA:3.40.1160.10 1 310 6.2E-59 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 3.1E-115 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PIRSF PIRSF000723 1 310 5.3E-122 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 2.5E-64 T 29-03-2018 CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 SUPERFAMILY SSF53633 3 308 4.45E-82 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS09730 3ad62076468b1e2d7cc1f554f8405d26 310 Pfam PF00696 Amino acid kinase family 3 282 9.4E-31 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS11830 96c899f0de3ada19c3a7f9cb4e0b038f 248 Pfam PF07670 Nucleoside recognition 93 197 3.7E-8 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 14 76 6.9E-11 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 11 221 31.151 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 SUPERFAMILY SSF52374 13 221 5.63E-56 T 29-03-2018 CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 15 220 3.1E-55 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 Gene3D G3DSA:3.40.50.620 6 221 1.2E-55 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS12225 3267f777bffa0256ab395bba205e54a7 221 Pfam PF01467 Cytidylyltransferase-like 15 195 4.6E-34 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CPU03_RS17210 5a7e45433d711bf2709c9f22cf62e4cb 301 PIRSF PIRSF037112 14 301 2.8E-112 T 29-03-2018 IPR017113 Antirestriction, ArdC CPU03_RS17210 5a7e45433d711bf2709c9f22cf62e4cb 301 Pfam PF08401 Domain of unknown function (DUF1738) 27 140 5.1E-38 T 29-03-2018 IPR013610 Domain of unknown function DUF1738 CPU03_RS16960 86b39333a36b908b96882f9d14781af2 254 Pfam PF02432 Fimbrial, major and minor subunit 29 253 1.1E-58 T 29-03-2018 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 CPU03_RS09095 709d7f0385c5d7c26d0ae6894540f4b1 690 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 671 1.0E-180 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CPU03_RS09095 709d7f0385c5d7c26d0ae6894540f4b1 690 Pfam PF13515 Fusaric acid resistance protein-like 378 498 4.2E-17 T 29-03-2018 CPU03_RS09095 709d7f0385c5d7c26d0ae6894540f4b1 690 Pfam PF12805 FUSC-like inner membrane protein yccS 63 338 3.5E-69 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CPU03_RS08780 59cab6c131b5e74d1b88bdfe67cea17a 680 Pfam PF01432 Peptidase family M3 222 677 3.0E-166 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CPU03_RS08780 59cab6c131b5e74d1b88bdfe67cea17a 680 Gene3D G3DSA:1.20.1050.40 4 138 8.5E-41 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CPU03_RS08780 59cab6c131b5e74d1b88bdfe67cea17a 680 Gene3D G3DSA:1.10.1370.10 140 439 1.7E-57 T 29-03-2018 CPU03_RS08780 59cab6c131b5e74d1b88bdfe67cea17a 680 Gene3D G3DSA:1.10.1370.10 450 680 3.7E-68 T 29-03-2018 CPU03_RS08780 59cab6c131b5e74d1b88bdfe67cea17a 680 SUPERFAMILY SSF55486 1 677 3.04E-208 T 29-03-2018 CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 Pfam PF06725 3D domain 278 355 5.6E-24 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 SUPERFAMILY SSF50685 25 354 9.42E-114 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 Pfam PF03562 MltA specific insert domain 90 258 1.2E-41 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 SMART SM00925 125 258 1.9E-70 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 PIRSF PIRSF019422 1 147 1.4E-14 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 PIRSF PIRSF019422 145 366 3.0E-73 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CPU03_RS04280 1fdb29da6f00dad09c9e053c1d57573a 383 Gene3D G3DSA:2.40.240.50 58 259 1.2E-61 T 29-03-2018 CPU03_RS13870 60abef7fb3f9d24465b911c6a6195e81 202 Gene3D G3DSA:1.20.144.10 4 191 1.6E-22 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS13870 60abef7fb3f9d24465b911c6a6195e81 202 SUPERFAMILY SSF48317 2 193 1.44E-32 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS13870 60abef7fb3f9d24465b911c6a6195e81 202 Pfam PF01569 PAP2 superfamily 64 171 1.6E-16 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS13870 60abef7fb3f9d24465b911c6a6195e81 202 SMART SM00014 58 169 3.3E-20 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CPU03_RS01210 9c72d7ceaee24f243955742483a9fb50 298 SUPERFAMILY SSF74650 13 280 1.07E-67 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS01210 9c72d7ceaee24f243955742483a9fb50 298 Pfam PF01263 Aldose 1-epimerase 33 277 2.9E-40 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CPU03_RS01210 9c72d7ceaee24f243955742483a9fb50 298 PIRSF PIRSF016020 7 297 2.1E-60 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CPU03_RS01210 9c72d7ceaee24f243955742483a9fb50 298 Gene3D G3DSA:2.70.98.10 1 297 1.7E-67 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS05715 2d19dd35b4bbd6693a8b932c42f53925 107 Pfam PF04606 Ogr/Delta-like zinc finger 25 71 1.5E-19 T 29-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CPU03_RS05715 2d19dd35b4bbd6693a8b932c42f53925 107 Gene3D G3DSA:2.20.25.10 24 65 7.1E-4 T 29-03-2018 CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 Pfam PF00005 ABC transporter 39 195 9.2E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 329 3.2E-23 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 SMART SM00382 47 253 2.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 SUPERFAMILY SSF52540 48 311 4.22E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 311 1.5E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 Gene3D G3DSA:3.40.50.300 15 334 3.7E-71 T 29-03-2018 CPU03_RS01025 46930564d0e77d9b298795d2fa3bd6e0 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CPU03_RS05230 70cfca2a11bc81fd6ec6edc01099295d 598 Hamap MF_00933 Arylsulfate sulfotransferase AssT [assT]. 1 598 76.314 T 29-03-2018 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria GO:0004062 CPU03_RS05230 70cfca2a11bc81fd6ec6edc01099295d 598 Pfam PF05935 Arylsulfotransferase (ASST) 146 587 9.5E-137 T 29-03-2018 IPR010262 Arylsulfotransferase, C-terminal CPU03_RS05230 70cfca2a11bc81fd6ec6edc01099295d 598 Gene3D G3DSA:2.120.10.30 139 584 0.0054 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CPU03_RS05230 70cfca2a11bc81fd6ec6edc01099295d 598 Pfam PF17425 Arylsulfotransferase Ig-like domain 41 127 3.6E-24 T 29-03-2018 IPR035391 Arylsulfotransferase, Ig-like domain CPU03_RS03170 b9006b9a2f17afdf1d29ea0c09b5d377 177 Pfam PF00419 Fimbrial protein 27 177 1.3E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS03170 b9006b9a2f17afdf1d29ea0c09b5d377 177 Gene3D G3DSA:2.60.40.1090 25 177 2.2E-35 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS03170 b9006b9a2f17afdf1d29ea0c09b5d377 177 SUPERFAMILY SSF49401 33 177 5.97E-32 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 44 391 75.056 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 42 396 2.3E-174 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 SUPERFAMILY SSF102114 143 358 8.24E-14 T 29-03-2018 CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 PIRSF PIRSF006004 39 404 2.1E-146 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 Gene3D G3DSA:3.20.20.70 53 385 1.2E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS11340 2d5465904cbe1a6f05e71c70430239a4 411 Pfam PF04055 Radical SAM superfamily 147 316 6.1E-17 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS13930 b43e8ea2adb529723811f11e8a680512 163 Pfam PF10722 Putative bacterial sensory transduction regulator 8 130 2.1E-14 T 29-03-2018 IPR019660 Putative sensory transduction regulator YbjN CPU03_RS12025 999f3a7d1b5b00351eb097f7bb9aefef 271 SUPERFAMILY SSF53335 43 194 4.63E-21 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS12025 999f3a7d1b5b00351eb097f7bb9aefef 271 Pfam PF13847 Methyltransferase domain 58 130 1.4E-12 T 29-03-2018 IPR025714 Methyltransferase domain CPU03_RS12025 999f3a7d1b5b00351eb097f7bb9aefef 271 Gene3D G3DSA:3.40.50.150 7 250 1.2E-21 T 29-03-2018 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 Gene3D G3DSA:3.40.190.10 178 268 2.3E-19 T 29-03-2018 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 Gene3D G3DSA:3.40.190.10 82 177 5.0E-20 T 29-03-2018 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 SUPERFAMILY SSF46785 4 87 1.57E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 Pfam PF03466 LysR substrate binding domain 91 291 4.3E-44 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 Gene3D G3DSA:1.10.10.10 1 81 9.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15710 654d7f229424d211ad0e4e3c259d293b 308 SUPERFAMILY SSF53850 92 296 1.23E-41 T 29-03-2018 CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 SUPERFAMILY SSF53850 29 336 7.91E-97 T 29-03-2018 CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 Gene3D G3DSA:3.40.190.10 26 160 5.6E-33 T 29-03-2018 CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 Gene3D G3DSA:3.40.190.10 161 338 3.6E-25 T 29-03-2018 CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 Pfam PF12849 PBP superfamily domain 21 308 1.9E-61 T 29-03-2018 IPR024370 PBP domain CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 PIRSF PIRSF002756 2 338 4.6E-108 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CPU03_RS08125 a2b70c75b1dc120d0eb255c8932e72ed 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 2.0E-125 T 29-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CPU03_RS05820 dcc4f37039e0cc9374f035ebce59b63d 386 Gene3D G3DSA:3.90.1150.10 273 381 5.2E-17 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS05820 dcc4f37039e0cc9374f035ebce59b63d 386 Pfam PF00155 Aminotransferase class I and II 52 376 2.8E-34 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CPU03_RS05820 dcc4f37039e0cc9374f035ebce59b63d 386 Gene3D G3DSA:3.40.640.10 57 272 1.4E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS05820 dcc4f37039e0cc9374f035ebce59b63d 386 SUPERFAMILY SSF53383 40 379 1.49E-61 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 Gene3D G3DSA:3.20.20.70 1 255 9.4E-102 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 4.3E-94 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 Pfam PF00121 Triosephosphate isomerase 5 246 3.0E-93 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.578 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS08430 9b3c086c57141b52cc72e919e5a49664 255 SUPERFAMILY SSF51351 1 251 4.71E-92 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CPU03_RS05775 0282a9e165e91c42ad54178895d1fd33 191 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 85 187 3.3E-33 T 29-03-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 CPU03_RS05775 0282a9e165e91c42ad54178895d1fd33 191 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 13 75 4.5E-21 T 29-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CPU03_RS05775 0282a9e165e91c42ad54178895d1fd33 191 Gene3D G3DSA:1.10.260.40 6 76 1.3E-4 T 29-03-2018 CPU03_RS13040 f07b9ec449ea10bea35686aeca2934d7 166 Pfam PF03918 Cytochrome C biogenesis protein 14 157 1.4E-54 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CPU03_RS17220 f3305ad9c324c578f775a2052a24cdbb 242 Pfam PF06952 PsiA protein 1 233 1.4E-74 T 29-03-2018 IPR009713 Uncharacterised protein family PsiA CPU03_RS01870 6046b1241fa34413cbb36182a1ed2acc 443 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 38 52 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CPU03_RS01870 6046b1241fa34413cbb36182a1ed2acc 443 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 38 377 2.2E-16 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CPU03_RS01870 6046b1241fa34413cbb36182a1ed2acc 443 SUPERFAMILY SSF53254 35 432 1.51E-67 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS01870 6046b1241fa34413cbb36182a1ed2acc 443 Gene3D G3DSA:3.40.50.1240 29 438 3.7E-52 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS11995 6ff4f50ceff122f3d8c23e10a3f60bd2 403 Gene3D G3DSA:3.40.50.620 8 231 4.5E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS11995 6ff4f50ceff122f3d8c23e10a3f60bd2 403 Pfam PF11922 Domain of unknown function (DUF3440) 235 338 1.2E-26 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CPU03_RS11995 6ff4f50ceff122f3d8c23e10a3f60bd2 403 Pfam PF11922 Domain of unknown function (DUF3440) 352 384 8.2E-8 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 CPU03_RS11995 6ff4f50ceff122f3d8c23e10a3f60bd2 403 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 233 9.3E-19 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CPU03_RS11995 6ff4f50ceff122f3d8c23e10a3f60bd2 403 SUPERFAMILY SSF52402 9 230 5.94E-40 T 29-03-2018 CPU03_RS00250 30a52724ca0901098917c21fd32315cf 256 Gene3D G3DSA:2.10.230.10 101 174 5.8E-7 T 29-03-2018 CPU03_RS00250 30a52724ca0901098917c21fd32315cf 256 SUPERFAMILY SSF57938 152 203 1.92E-5 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CPU03_RS00250 30a52724ca0901098917c21fd32315cf 256 Pfam PF03589 Antitermination protein 161 248 4.7E-18 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CPU03_RS00250 30a52724ca0901098917c21fd32315cf 256 Pfam PF03589 Antitermination protein 23 111 1.9E-20 T 29-03-2018 IPR003222 Antitermination protein GO:0003677|GO:0006355 CPU03_RS02425 134cb7150f1da7c0a5f1702d445b3107 452 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 448 2.9E-131 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CPU03_RS02425 134cb7150f1da7c0a5f1702d445b3107 452 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 2.1E-178 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CPU03_RS07935 abbbb2c35677de5fec1f4edf63467f43 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.2E-45 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CPU03_RS07935 abbbb2c35677de5fec1f4edf63467f43 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-38 T 29-03-2018 IPR009383 Protein of unknown function DUF1040 CPU03_RS09770 9dba0c0248f9f0e1c36041e4b17414eb 472 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 445 1.4E-128 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS09770 9dba0c0248f9f0e1c36041e4b17414eb 472 Pfam PF00860 Permease family 22 414 2.1E-102 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS09770 9dba0c0248f9f0e1c36041e4b17414eb 472 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS09770 9dba0c0248f9f0e1c36041e4b17414eb 472 TIGRFAM TIGR03173 pbuX: xanthine permease 28 446 1.0E-125 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 1.3E-122 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 SUPERFAMILY SSF160544 252 355 1.05E-39 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 Gene3D G3DSA:3.40.1690.10 218 353 1.8E-57 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.9E-41 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.9E-41 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.9E-41 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.9E-41 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.9E-41 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CPU03_RS02265 8d35bdf56a3226091b0eabfff017b0a9 388 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 8.4E-130 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CPU03_RS04275 f69577582fcc01d0e61ff2293a390203 273 Pfam PF00899 ThiF family 20 263 3.5E-39 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CPU03_RS04275 f69577582fcc01d0e61ff2293a390203 273 Gene3D G3DSA:3.40.50.720 2 270 5.0E-54 T 29-03-2018 CPU03_RS04275 f69577582fcc01d0e61ff2293a390203 273 SUPERFAMILY SSF69572 4 262 4.45E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CPU03_RS07255 b6d747d2f4bca18a9bdd90cb3448633d 604 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 419 540 1.3E-27 T 29-03-2018 IPR025299 CstA, C-terminal domain CPU03_RS07255 b6d747d2f4bca18a9bdd90cb3448633d 604 Pfam PF02554 Carbon starvation protein CstA 6 369 8.0E-137 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CPU03_RS03670 39cc501873242b1379548cd41c3e0ed5 164 Gene3D G3DSA:3.40.50.1820 5 162 8.8E-6 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold CPU03_RS04050 86975e1ec764bc4153198112f5103da5 225 Pfam PF17185 NlpE C-terminal OB domain 136 225 2.2E-33 T 29-03-2018 IPR033450 NlpE, C-terminal OB domain CPU03_RS04050 86975e1ec764bc4153198112f5103da5 225 Pfam PF04170 NlpE N-terminal domain 38 122 2.0E-22 T 29-03-2018 IPR007298 Copper resistance lipoprotein NlpE CPU03_RS13450 aefdab3dd98105aab51c07fafc8c4f60 184 SUPERFAMILY SSF56925 57 184 1.45E-9 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS13450 aefdab3dd98105aab51c07fafc8c4f60 184 Gene3D G3DSA:2.40.160.10 10 184 2.1E-9 T 29-03-2018 CPU03_RS13450 aefdab3dd98105aab51c07fafc8c4f60 184 Pfam PF07437 YfaZ precursor 11 184 1.0E-62 T 29-03-2018 IPR009998 YfaZ CPU03_RS14725 8c25f1ce145e3a0d6a9e2c7b4aab2432 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 1.7E-135 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CPU03_RS14725 8c25f1ce145e3a0d6a9e2c7b4aab2432 400 Pfam PF02687 FtsX-like permease family 297 391 1.4E-12 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CPU03_RS14725 8c25f1ce145e3a0d6a9e2c7b4aab2432 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 2.1E-16 T 29-03-2018 IPR025857 MacB-like periplasmic core domain CPU03_RS04340 af79a68e8bae747117bdfc8ca1a23e56 183 PIRSF PIRSF004525 1 179 4.2E-29 T 29-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CPU03_RS02395 38bd4e7f2aa5e25ed691fcb2ff65cb9c 169 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 75 108 1.8E-10 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS02395 38bd4e7f2aa5e25ed691fcb2ff65cb9c 169 SUPERFAMILY SSF51161 9 157 6.52E-34 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS02395 38bd4e7f2aa5e25ed691fcb2ff65cb9c 169 Gene3D G3DSA:2.160.10.10 1 168 1.1E-34 T 29-03-2018 CPU03_RS02395 38bd4e7f2aa5e25ed691fcb2ff65cb9c 169 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 82 110 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CPU03_RS07585 69a646c5cc3307971361dcbb3d85c1be 358 Gene3D G3DSA:3.40.50.2000 163 348 2.4E-42 T 29-03-2018 CPU03_RS07585 69a646c5cc3307971361dcbb3d85c1be 358 Gene3D G3DSA:3.40.50.2000 1 157 1.2E-35 T 29-03-2018 CPU03_RS07585 69a646c5cc3307971361dcbb3d85c1be 358 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 2.0E-161 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CPU03_RS07585 69a646c5cc3307971361dcbb3d85c1be 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 322 2.2E-80 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CPU03_RS07585 69a646c5cc3307971361dcbb3d85c1be 358 SUPERFAMILY SSF53756 1 344 1.88E-100 T 29-03-2018 CPU03_RS04225 ee2302a9d6f1678d1ed02055af2edc83 109 Gene3D G3DSA:1.20.1440.40 3 104 6.0E-37 T 29-03-2018 IPR023376 YqcC-like domain CPU03_RS04225 ee2302a9d6f1678d1ed02055af2edc83 109 PIRSF PIRSF006257 1 108 7.5E-38 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 CPU03_RS04225 ee2302a9d6f1678d1ed02055af2edc83 109 Pfam PF04287 tRNA pseudouridine synthase C 7 102 1.2E-36 T 29-03-2018 IPR023376 YqcC-like domain CPU03_RS04225 ee2302a9d6f1678d1ed02055af2edc83 109 SUPERFAMILY SSF158452 3 106 3.14E-38 T 29-03-2018 IPR023376 YqcC-like domain CPU03_RS06855 b9c8d5a534065dff5f1bb7395e85d519 122 Gene3D G3DSA:1.10.3830.10 6 118 1.4E-41 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CPU03_RS06855 b9c8d5a534065dff5f1bb7395e85d519 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 116 3.7E-35 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CPU03_RS06855 b9c8d5a534065dff5f1bb7395e85d519 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 69 80 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CPU03_RS16970 0b23a5a4015853faf45abda6720a176d 284 Pfam PF02432 Fimbrial, major and minor subunit 29 283 4.2E-12 T 29-03-2018 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 CPU03_RS10955 b2755cd4138b6472aff7801a8fab5fa6 254 Pfam PF01975 Survival protein SurE 3 180 2.6E-55 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CPU03_RS10955 b2755cd4138b6472aff7801a8fab5fa6 254 Gene3D G3DSA:3.40.1210.10 1 247 2.3E-80 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CPU03_RS10955 b2755cd4138b6472aff7801a8fab5fa6 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.3E-73 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CPU03_RS10955 b2755cd4138b6472aff7801a8fab5fa6 254 SUPERFAMILY SSF64167 1 245 6.41E-79 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CPU03_RS10955 b2755cd4138b6472aff7801a8fab5fa6 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 39.617 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CPU03_RS06130 c306140e17367832ad353164fc788759 92 Pfam PF07338 Protein of unknown function (DUF1471) 39 92 2.3E-15 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS06130 c306140e17367832ad353164fc788759 92 Gene3D G3DSA:3.30.1660.10 27 92 2.3E-18 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS06130 c306140e17367832ad353164fc788759 92 SUPERFAMILY SSF159871 5 92 1.83E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS17010 0d343d1bb0fb350ff7a268d4605e7793 56 Pfam PF13683 Integrase core domain 9 43 2.6E-9 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CPU03_RS17010 0d343d1bb0fb350ff7a268d4605e7793 56 Gene3D G3DSA:3.30.420.10 2 53 2.1E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS17010 0d343d1bb0fb350ff7a268d4605e7793 56 SUPERFAMILY SSF53098 10 51 3.22E-8 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.337 T 29-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 Pfam PF01464 Transglycosylase SLT domain 194 316 9.7E-33 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 Gene3D G3DSA:1.10.530.10 181 355 4.3E-37 T 29-03-2018 CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 SUPERFAMILY SSF53955 160 356 2.06E-38 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS06670 6f28970ed06aebdd983a8c2e23018ba7 359 Pfam PF11873 Domain of unknown function (DUF3393) 4 190 2.9E-75 T 29-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CPU03_RS15215 4754cda520721faff8fbabd395743cd1 388 Gene3D G3DSA:1.20.1250.20 202 384 3.8E-12 T 29-03-2018 CPU03_RS15215 4754cda520721faff8fbabd395743cd1 388 Gene3D G3DSA:1.20.1250.20 2 195 1.4E-16 T 29-03-2018 CPU03_RS15215 4754cda520721faff8fbabd395743cd1 388 Pfam PF07690 Major Facilitator Superfamily 10 350 2.5E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS15215 4754cda520721faff8fbabd395743cd1 388 SUPERFAMILY SSF103473 3 382 3.92E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS13910 cc7a51b542a089a62934803167a54f0f 126 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 3 120 7.0E-35 T 29-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 Pfam PF02253 Phospholipase A1 55 300 1.4E-95 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 Gene3D G3DSA:2.40.230.10 45 304 7.9E-95 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 218 236 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 273 293 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 251 268 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 114 130 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 183 201 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 92 109 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 PRINTS PR01486 Bacterial phospholipase A1 protein signature 137 156 2.3E-69 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS07325 57fcfe06bc7d1200d145e54d36ada128 304 SUPERFAMILY SSF56931 51 303 1.44E-90 T 29-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CPU03_RS12650 8f7230d5c8e17e23cb08b3276ab61151 348 Pfam PF01263 Aldose 1-epimerase 20 343 2.9E-74 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CPU03_RS12650 8f7230d5c8e17e23cb08b3276ab61151 348 Gene3D G3DSA:2.70.98.10 4 348 4.3E-96 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS12650 8f7230d5c8e17e23cb08b3276ab61151 348 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 346 1.8E-125 T 29-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CPU03_RS12650 8f7230d5c8e17e23cb08b3276ab61151 348 PIRSF PIRSF005096 2 348 2.8E-104 T 29-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CPU03_RS12650 8f7230d5c8e17e23cb08b3276ab61151 348 SUPERFAMILY SSF74650 8 345 7.53E-97 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 Pfam PF00696 Amino acid kinase family 4 277 5.4E-51 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 Gene3D G3DSA:3.30.70.260 372 452 9.7E-14 T 29-03-2018 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 SUPERFAMILY SSF55021 377 450 3.61E-13 T 29-03-2018 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 Gene3D G3DSA:3.30.70.260 285 370 1.9E-17 T 29-03-2018 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 SUPERFAMILY SSF53633 4 291 1.57E-77 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 PIRSF PIRSF000726 2 452 1.2E-143 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 SUPERFAMILY SSF55021 297 393 3.21E-15 T 29-03-2018 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 450 2.9E-137 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 8.2E-130 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CPU03_RS06925 59e57e71d091c7212be2a2c014353d4a 453 Gene3D G3DSA:3.40.1160.10 1 284 6.6E-67 T 29-03-2018 CPU03_RS06585 d44727340b2315ed77478e75c5b552a9 224 Pfam PF04231 Endonuclease I 34 219 5.5E-41 T 29-03-2018 IPR007346 Endonuclease I GO:0004518 CPU03_RS06585 d44727340b2315ed77478e75c5b552a9 224 SUPERFAMILY SSF54060 15 219 8.12E-86 T 29-03-2018 CPU03_RS02365 75cd1a91339ee4f3a738f077e56d09a8 300 SUPERFAMILY SSF53448 1 289 7.43E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02365 75cd1a91339ee4f3a738f077e56d09a8 300 Gene3D G3DSA:3.90.550.10 1 300 5.3E-45 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02365 75cd1a91339ee4f3a738f077e56d09a8 300 Pfam PF00483 Nucleotidyl transferase 5 228 1.6E-17 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS14075 c3127f49229bda81155e27402939f64b 556 Gene3D G3DSA:3.40.50.300 1 355 1.7E-17 T 29-03-2018 CPU03_RS14075 c3127f49229bda81155e27402939f64b 556 SUPERFAMILY SSF52540 184 344 5.32E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14075 c3127f49229bda81155e27402939f64b 556 SUPERFAMILY SSF52540 1 155 5.32E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS14075 c3127f49229bda81155e27402939f64b 556 Pfam PF11398 Protein of unknown function (DUF2813) 1 379 5.9E-150 T 29-03-2018 IPR022602 Protein of unknown function DUF2813 CPU03_RS16635 26c2e38ad3f814ed32f2b75dee6a43fd 84 Pfam PF03891 Domain of unknown function (DUF333) 40 77 2.5E-10 T 29-03-2018 IPR005590 Protein of unknown function DUF333 CPU03_RS01260 b29206485182076eabaff9402ac9e865 511 Pfam PF04293 SpoVR like protein 19 450 5.0E-175 T 29-03-2018 IPR007390 Sporulation stage V, protein R CPU03_RS00435 ae9f9e7814a3cff75c6d426e21225a7c 94 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 27 71 5.9E-8 T 29-03-2018 IPR014321 Phage shock protein, PspD CPU03_RS10255 0dbf0cdd4ae9243b10bf729dcf507f4a 433 Gene3D G3DSA:1.20.1250.20 236 433 9.6E-20 T 29-03-2018 CPU03_RS10255 0dbf0cdd4ae9243b10bf729dcf507f4a 433 Pfam PF07690 Major Facilitator Superfamily 30 390 1.8E-55 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS10255 0dbf0cdd4ae9243b10bf729dcf507f4a 433 Gene3D G3DSA:1.20.1250.20 13 216 1.4E-41 T 29-03-2018 CPU03_RS10255 0dbf0cdd4ae9243b10bf729dcf507f4a 433 SUPERFAMILY SSF103473 14 431 1.57E-78 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 Gene3D G3DSA:1.10.287.1050 1 57 3.1E-22 T 29-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 SMART SM00528 87 134 4.7E-18 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 Gene3D G3DSA:4.10.430.10 93 134 1.4E-17 T 29-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 SUPERFAMILY SSF81273 2 58 1.67E-15 T 29-03-2018 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 PIRSF PIRSF002096 1 134 8.1E-51 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 SUPERFAMILY SSF81273 92 134 2.2E-11 T 29-03-2018 CPU03_RS10485 37d885da9e4697c6b810551988d9c704 135 Pfam PF00816 H-NS histone family 32 128 1.4E-18 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 97 6.5E-17 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 103 1.1E-29 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 106 34.806 T 29-03-2018 IPR022866 Heat shock protein HspQ CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 Gene3D G3DSA:2.30.30.390 1 106 8.8E-16 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 SUPERFAMILY SSF141255 4 96 1.83E-24 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CPU03_RS02025 cdaabd0ef645d77e92dc205714656eb3 106 SMART SM00992 3 103 1.4E-27 T 29-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CPU03_RS16195 8c325969225cc405b40ad06f655f77b8 115 Pfam PF11604 Copper binding periplasmic protein CusF 48 114 9.5E-25 T 29-03-2018 IPR021647 Copper binding periplasmic protein CusF CPU03_RS10320 c7087ebbc6e63aa3ef868d21ef657748 443 Pfam PF13520 Amino acid permease 10 404 2.4E-46 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS10320 c7087ebbc6e63aa3ef868d21ef657748 443 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 6 428 2.4E-210 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CPU03_RS10320 c7087ebbc6e63aa3ef868d21ef657748 443 PIRSF PIRSF006060 1 431 3.6E-52 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS10320 c7087ebbc6e63aa3ef868d21ef657748 443 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 6.4E-130 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CPU03_RS10320 c7087ebbc6e63aa3ef868d21ef657748 443 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 436 35.184 T 29-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CPU03_RS03980 61b2404528814e026e362cba9497fbf3 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.174 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CPU03_RS03980 61b2404528814e026e362cba9497fbf3 192 Gene3D G3DSA:3.40.50.10490 1 192 4.5E-41 T 29-03-2018 CPU03_RS03980 61b2404528814e026e362cba9497fbf3 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.6E-82 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CPU03_RS03980 61b2404528814e026e362cba9497fbf3 192 SUPERFAMILY SSF53697 1 188 5.06E-51 T 29-03-2018 CPU03_RS03980 61b2404528814e026e362cba9497fbf3 192 Pfam PF13580 SIS domain 26 146 7.0E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS16915 5421c85fa4a17214ca21e213dcd56e78 318 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 81 4.4E-13 T 29-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CPU03_RS16915 5421c85fa4a17214ca21e213dcd56e78 318 Pfam PF04221 RelB antitoxin 2 47 3.8E-7 T 29-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CPU03_RS10555 7b0fdd8cd5a46a74c61316e09a12ecc8 239 Pfam PF04402 Protein of unknown function (DUF541) 34 235 1.1E-46 T 29-03-2018 IPR007497 Protein of unknown function DUF541 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 Gene3D G3DSA:3.30.420.40 246 478 2.2E-38 T 29-03-2018 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 440 9.9E-25 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 Gene3D G3DSA:3.30.420.40 1 245 4.3E-58 T 29-03-2018 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 249 8.2E-73 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 Hamap MF_00986 L-fuculokinase [fucK]. 3 468 60.331 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 SUPERFAMILY SSF53067 255 471 6.38E-41 T 29-03-2018 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 PIRSF PIRSF000538 3 478 1.7E-77 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 SUPERFAMILY SSF53067 5 252 1.78E-55 T 29-03-2018 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 5 464 7.6E-199 T 29-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CPU03_RS06545 2ae350777f28849b1cd2b7c8619cda5d 487 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CPU03_RS01205 35517d28b1f964d869a1d617ce3b9930 138 SUPERFAMILY SSF55811 14 118 9.21E-19 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CPU03_RS01205 35517d28b1f964d869a1d617ce3b9930 138 Pfam PF00293 NUDIX domain 18 116 1.5E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CPU03_RS01205 35517d28b1f964d869a1d617ce3b9930 138 Gene3D G3DSA:3.90.79.10 11 134 2.7E-16 T 29-03-2018 CPU03_RS10045 1e76d87e77315e095b9f67621096f5da 149 Gene3D G3DSA:3.40.50.10110 1 146 7.1E-51 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CPU03_RS10045 1e76d87e77315e095b9f67621096f5da 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 7.7E-39 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CPU03_RS10045 1e76d87e77315e095b9f67621096f5da 149 SUPERFAMILY SSF102400 1 143 5.49E-45 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CPU03_RS05685 0b74a9a10b287f667fb323420a296e3f 150 Pfam PF05926 Phage head completion protein (GPL) 14 150 2.6E-41 T 29-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 CPU03_RS03910 5975cd471e631fc2b701cbc05a93b727 133 Pfam PF07417 Transcriptional regulator Crl 5 122 2.4E-49 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CPU03_RS03910 5975cd471e631fc2b701cbc05a93b727 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 30.572 T 29-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CPU03_RS07225 fc3737b7ec4049400f50b3562815e00b 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.7E-21 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CPU03_RS07225 fc3737b7ec4049400f50b3562815e00b 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.139 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CPU03_RS07225 fc3737b7ec4049400f50b3562815e00b 89 Pfam PF02416 mttA/Hcf106 family 4 71 1.6E-12 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CPU03_RS15565 dbee2d9d9afd66c5939e26099e95dd30 184 Pfam PF00030 Beta/Gamma crystallin 105 181 2.1E-9 T 29-03-2018 IPR001064 Beta/gamma crystallin CPU03_RS15565 dbee2d9d9afd66c5939e26099e95dd30 184 Gene3D G3DSA:2.60.20.10 95 184 8.1E-19 T 29-03-2018 CPU03_RS15565 dbee2d9d9afd66c5939e26099e95dd30 184 SMART SM00247 104 182 1.2E-7 T 29-03-2018 IPR001064 Beta/gamma crystallin CPU03_RS15565 dbee2d9d9afd66c5939e26099e95dd30 184 SUPERFAMILY SSF49695 101 182 6.7E-15 T 29-03-2018 IPR011024 Gamma-crystallin-related CPU03_RS06190 5052a26ddc5ddb90d4c40375d6bcb368 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 4.7E-24 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CPU03_RS06190 5052a26ddc5ddb90d4c40375d6bcb368 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.7E-25 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CPU03_RS06190 5052a26ddc5ddb90d4c40375d6bcb368 206 Gene3D G3DSA:3.10.50.40 90 206 6.7E-41 T 29-03-2018 CPU03_RS06190 5052a26ddc5ddb90d4c40375d6bcb368 206 SUPERFAMILY SSF54534 8 205 1.28E-54 T 29-03-2018 CPU03_RS06190 5052a26ddc5ddb90d4c40375d6bcb368 206 Gene3D G3DSA:1.10.287.460 1 89 4.8E-21 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CPU03_RS14380 19b562a43da942453e8d0cf2beafdedc 134 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 27 95 1.2E-20 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CPU03_RS14380 19b562a43da942453e8d0cf2beafdedc 134 Pfam PF04347 Flagellar biosynthesis protein, FliO 39 123 1.3E-21 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 Pfam PF04055 Radical SAM superfamily 41 222 6.5E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 PIRSF PIRSF000371 70 292 9.1E-69 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 PIRSF PIRSF000371 13 82 1.0E-26 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 Gene3D G3DSA:3.80.30.10 115 292 4.8E-30 T 29-03-2018 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 SUPERFAMILY SSF102114 22 67 2.75E-14 T 29-03-2018 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 SUPERFAMILY SSF102114 99 255 2.75E-14 T 29-03-2018 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 83 284 2.6E-53 T 29-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 Pfam PF13353 4Fe-4S single cluster domain 34 147 1.3E-10 T 29-03-2018 CPU03_RS14890 8f2e9a4cacaa63bc6b5966b29ef4b2dc 292 Gene3D G3DSA:3.30.70.20 17 110 8.6E-4 T 29-03-2018 CPU03_RS12645 f895ee772795aa08dd160dc17a675f79 459 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 408 424 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CPU03_RS12645 f895ee772795aa08dd160dc17a675f79 459 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 459 7.9E-56 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS12645 f895ee772795aa08dd160dc17a675f79 459 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 40 458 4.7E-111 T 29-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CPU03_RS12120 6b64b6abaa8fd1dc9181695c0da9c892 507 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 501 5.3E-147 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CPU03_RS12120 6b64b6abaa8fd1dc9181695c0da9c892 507 ProSitePatterns PS01303 BCCT family of transporters signature. 317 326 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CPU03_RS12120 6b64b6abaa8fd1dc9181695c0da9c892 507 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 501 4.9E-115 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CPU03_RS04960 7762a0208c13752fec793cf34e34a23b 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 180 1.1E-13 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS04960 7762a0208c13752fec793cf34e34a23b 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 180 7.2E-12 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CPU03_RS04960 7762a0208c13752fec793cf34e34a23b 218 SUPERFAMILY SSF56784 7 202 9.47E-33 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS04960 7762a0208c13752fec793cf34e34a23b 218 Gene3D G3DSA:1.10.150.240 23 71 8.8E-6 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CPU03_RS04960 7762a0208c13752fec793cf34e34a23b 218 Gene3D G3DSA:3.40.50.1000 72 204 1.6E-18 T 29-03-2018 IPR023214 HAD-like domain CPU03_RS15175 a1f11896dd6cceef5e5e2d1245ffc1a9 215 Pfam PF00583 Acetyltransferase (GNAT) family 28 182 1.3E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS15175 a1f11896dd6cceef5e5e2d1245ffc1a9 215 Gene3D G3DSA:3.40.630.30 5 211 2.5E-18 T 29-03-2018 CPU03_RS15175 a1f11896dd6cceef5e5e2d1245ffc1a9 215 SUPERFAMILY SSF55729 2 86 5.89E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS15175 a1f11896dd6cceef5e5e2d1245ffc1a9 215 SUPERFAMILY SSF55729 120 195 5.89E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 Pfam PF13247 4Fe-4S dicluster domain 107 207 2.2E-21 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 1.1E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 Gene3D G3DSA:3.30.70.20 56 126 3.3E-11 T 29-03-2018 CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 SUPERFAMILY SSF54862 39 323 4.4E-69 T 29-03-2018 CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 Gene3D G3DSA:3.30.70.20 24 55 0.0079 T 29-03-2018 CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 Gene3D G3DSA:3.30.70.20 127 170 5.5E-17 T 29-03-2018 CPU03_RS13385 05cb0c1791f5bf6fb8e7d77116c75582 327 Gene3D G3DSA:3.30.70.20 171 300 2.3E-16 T 29-03-2018 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 ProSitePatterns PS00202 Rubredoxin signature. 45 55 - T 29-03-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 SUPERFAMILY SSF57802 14 64 3.03E-19 T 29-03-2018 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 Gene3D G3DSA:2.20.28.10 12 65 1.2E-20 T 29-03-2018 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 PRINTS PR00163 Rubredoxin signature 15 31 9.9E-10 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 PRINTS PR00163 Rubredoxin signature 45 61 9.9E-10 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CPU03_RS10360 ef381191fef34cc89cee7e172b351940 65 Pfam PF00301 Rubredoxin 16 61 4.0E-22 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 CPU03_RS02005 382bf7ca1567e3ff39aaff9cbc107d6c 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 214 2.0E-39 T 29-03-2018 IPR006214 Bax inhibitor 1-related CPU03_RS02005 382bf7ca1567e3ff39aaff9cbc107d6c 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 29-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 CPU03_RS08440 6d873b003ce312a8481a9ec41ade4ec1 143 Pfam PF05656 Protein of unknown function (DUF805) 7 132 2.1E-20 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CPU03_RS14830 8e5e41de0774a29f9c0530559507a631 182 PIRSF PIRSF000847 1 178 5.7E-42 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CPU03_RS14830 8e5e41de0774a29f9c0530559507a631 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 7.4E-61 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CPU03_RS14830 8e5e41de0774a29f9c0530559507a631 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CPU03_RS14830 8e5e41de0774a29f9c0530559507a631 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.204 T 29-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CPU03_RS14830 8e5e41de0774a29f9c0530559507a631 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 4.1E-17 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CPU03_RS15960 6f35c737af9bd785552403c58cf413f8 183 Gene3D G3DSA:1.20.141.10 2 182 4.5E-45 T 29-03-2018 CPU03_RS15960 6f35c737af9bd785552403c58cf413f8 183 Pfam PF05838 Glycosyl hydrolase 108 10 92 1.7E-26 T 29-03-2018 IPR008565 Protein of unknown function DUF847 CPU03_RS15960 6f35c737af9bd785552403c58cf413f8 183 Pfam PF09374 Predicted Peptidoglycan domain 96 180 1.3E-25 T 29-03-2018 IPR018537 Peptidoglycan binding domain CPU03_RS15960 6f35c737af9bd785552403c58cf413f8 183 SUPERFAMILY SSF53955 4 177 3.66E-47 T 29-03-2018 IPR023346 Lysozyme-like domain CPU03_RS14675 d6186a043f8fb3e41e505db9b6a1c2ca 38 Pfam PF10968 Protein of unknown function (DUF2770) 2 36 2.7E-14 T 29-03-2018 IPR024494 Protein of unknown function DUF2770 CPU03_RS04055 ae4ecd7b8ea2336918156d05d56b60a0 138 Gene3D G3DSA:3.30.160.20 1 138 6.3E-38 T 29-03-2018 CPU03_RS04055 ae4ecd7b8ea2336918156d05d56b60a0 138 Pfam PF00472 RF-1 domain 8 132 2.4E-23 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CPU03_RS04055 ae4ecd7b8ea2336918156d05d56b60a0 138 SUPERFAMILY SSF75620 7 117 1.92E-11 T 29-03-2018 CPU03_RS04055 ae4ecd7b8ea2336918156d05d56b60a0 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CPU03_RS00520 3970b2eadec2d6991d58fd92dca532bc 196 Pfam PF02525 Flavodoxin-like fold 3 188 3.9E-32 T 29-03-2018 IPR003680 Flavodoxin-like fold CPU03_RS00520 3970b2eadec2d6991d58fd92dca532bc 196 Gene3D G3DSA:3.40.50.360 1 196 4.0E-31 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS00520 3970b2eadec2d6991d58fd92dca532bc 196 SUPERFAMILY SSF52218 1 193 7.78E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 SUPERFAMILY SSF52283 1 133 5.48E-27 T 29-03-2018 CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.4E-57 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 Gene3D G3DSA:3.40.50.720 109 289 1.9E-53 T 29-03-2018 CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 4.7E-26 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 Gene3D G3DSA:3.40.50.720 1 108 1.8E-25 T 29-03-2018 CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 SUPERFAMILY SSF51735 100 288 1.32E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS13875 b0f4b7d9d67e70bf0b8f7be19d51ab25 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CPU03_RS13490 c6ac4d4dedce704f6e04524006e980d5 150 Pfam PF02391 MoaE protein 11 121 9.7E-37 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS13490 c6ac4d4dedce704f6e04524006e980d5 150 SUPERFAMILY SSF54690 5 150 1.96E-53 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS13490 c6ac4d4dedce704f6e04524006e980d5 150 Gene3D G3DSA:3.90.1170.40 2 149 1.0E-55 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 3.6E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 SUPERFAMILY SSF52172 1 173 4.7E-37 T 29-03-2018 IPR011006 CheY-like superfamily CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 Gene3D G3DSA:1.10.10.10 119 224 3.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 Gene3D G3DSA:3.40.50.2300 1 118 5.4E-34 T 29-03-2018 CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 SMART SM00862 145 220 5.0E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 SMART SM00448 1 112 8.0E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS14760 9f6b50c7537f43ca130732b8b76d97f8 224 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CPU03_RS04950 4aef523688e30a5a6ebb4a0cc7d86767 436 SUPERFAMILY SSF103473 12 426 1.19E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS04950 4aef523688e30a5a6ebb4a0cc7d86767 436 Gene3D G3DSA:1.20.1250.20 5 230 4.0E-25 T 29-03-2018 CPU03_RS04950 4aef523688e30a5a6ebb4a0cc7d86767 436 Gene3D G3DSA:1.20.1250.20 232 434 2.5E-16 T 29-03-2018 CPU03_RS04950 4aef523688e30a5a6ebb4a0cc7d86767 436 Pfam PF07690 Major Facilitator Superfamily 62 361 8.0E-23 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS16610 521ab0c854a8eb7426ddd0e3d6c06169 64 Pfam PF13617 YnbE-like lipoprotein 10 61 1.5E-26 T 29-03-2018 IPR025985 YnbE-like lipoprotein CPU03_RS16610 521ab0c854a8eb7426ddd0e3d6c06169 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 17 64 6.0E-16 T 29-03-2018 CPU03_RS03705 5db12fa808f19bd25e6eacb3bbf84d63 75 Pfam PF13737 Transposase DDE domain 12 74 9.6E-15 T 29-03-2018 IPR025668 Transposase DDE domain CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 Gene3D G3DSA:1.10.10.10 7 89 1.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 Gene3D G3DSA:3.40.190.10 186 268 3.2E-13 T 29-03-2018 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 SUPERFAMILY SSF53850 100 302 4.81E-28 T 29-03-2018 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 Gene3D G3DSA:3.40.190.10 90 185 1.6E-6 T 29-03-2018 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 SUPERFAMILY SSF46785 13 96 8.28E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 72 3.0E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.2E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS03665 64e831d54ca054ca5c65c2076839c41b 305 Pfam PF03466 LysR substrate binding domain 99 300 5.8E-26 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 SUPERFAMILY SSF53850 89 296 1.49E-46 T 29-03-2018 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 Gene3D G3DSA:3.40.190.10 87 175 3.5E-22 T 29-03-2018 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 SUPERFAMILY SSF46785 1 85 1.14E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.6E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 Gene3D G3DSA:1.10.10.10 1 82 5.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 Pfam PF03466 LysR substrate binding domain 88 293 2.1E-52 T 29-03-2018 IPR005119 LysR, substrate-binding CPU03_RS07785 0f394f7628fc287377d55b52251d7c7b 307 Gene3D G3DSA:3.40.190.10 176 264 3.4E-27 T 29-03-2018 CPU03_RS12740 63c5031d2e577350388d434a05ae2fd2 90 Pfam PF09905 DNA-binding protein VF530 5 66 3.3E-33 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 CPU03_RS12740 63c5031d2e577350388d434a05ae2fd2 90 Gene3D G3DSA:1.10.720.30 12 68 2.1E-30 T 29-03-2018 IPR003034 SAP domain CPU03_RS09685 9ae5741b15f9c5acf3957b28ab9b6e06 114 Pfam PF04237 YjbR 11 102 3.9E-15 T 29-03-2018 IPR007351 Uncharacterised protein YjbR CPU03_RS09685 9ae5741b15f9c5acf3957b28ab9b6e06 114 SUPERFAMILY SSF142906 1 107 4.05E-26 T 29-03-2018 CPU03_RS02915 4777f91015dc28bb2de4ed5e0e47f3e0 117 SUPERFAMILY SSF52833 4 117 4.24E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS02915 4777f91015dc28bb2de4ed5e0e47f3e0 117 Gene3D G3DSA:3.40.30.10 1 117 4.7E-36 T 29-03-2018 CPU03_RS02915 4777f91015dc28bb2de4ed5e0e47f3e0 117 Pfam PF03960 ArsC family 7 115 2.7E-18 T 29-03-2018 IPR006660 Arsenate reductase-like CPU03_RS02915 4777f91015dc28bb2de4ed5e0e47f3e0 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 2.9E-46 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CPU03_RS04465 22005bfb0e1a0907f8043ea306f11529 297 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 41 297 4.8E-95 T 29-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CPU03_RS06905 61d67b62a995a042289441cc12ba9574 296 Gene3D G3DSA:1.10.3720.10 1 283 2.4E-43 T 29-03-2018 CPU03_RS06905 61d67b62a995a042289441cc12ba9574 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 1.3E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS06905 61d67b62a995a042289441cc12ba9574 296 SUPERFAMILY SSF161098 10 296 4.3E-68 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS15450 1391984bd8db32e91eb86bef832f2657 502 Pfam PF14264 Glucosyl transferase GtrII 27 334 3.1E-29 T 29-03-2018 IPR025686 Glucosyl transferase II CPU03_RS16715 f406790d112860c82631746eb731c211 210 Pfam PF13460 NAD(P)H-binding 8 188 9.5E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS16715 f406790d112860c82631746eb731c211 210 Gene3D G3DSA:3.40.50.720 2 198 2.6E-18 T 29-03-2018 CPU03_RS16715 f406790d112860c82631746eb731c211 210 SUPERFAMILY SSF51735 5 200 4.67E-24 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS00165 11feb48a4ba336a2a266848471850a95 119 Gene3D G3DSA:2.40.10.180 1 114 3.6E-25 T 29-03-2018 CPU03_RS00165 11feb48a4ba336a2a266848471850a95 119 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 3 114 4.0E-26 T 29-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 CPU03_RS00165 11feb48a4ba336a2a266848471850a95 119 Pfam PF05354 Phage Head-Tail Attachment 2 113 6.7E-37 T 29-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 CPU03_RS00165 11feb48a4ba336a2a266848471850a95 119 SUPERFAMILY SSF69279 3 113 1.28E-33 T 29-03-2018 CPU03_RS06410 0e8a34efa43a1636f78341d4b925a85c 239 Pfam PF02754 Cysteine-rich domain 133 216 2.3E-13 T 29-03-2018 IPR004017 Cysteine-rich domain CPU03_RS06410 0e8a34efa43a1636f78341d4b925a85c 239 Pfam PF02754 Cysteine-rich domain 3 84 1.7E-12 T 29-03-2018 IPR004017 Cysteine-rich domain CPU03_RS01345 712e7a3c9037bb67ca47d7f3d1669fc6 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 29-03-2018 IPR019897 RidA, conserved site CPU03_RS01345 712e7a3c9037bb67ca47d7f3d1669fc6 114 SUPERFAMILY SSF55298 2 113 6.44E-26 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CPU03_RS01345 712e7a3c9037bb67ca47d7f3d1669fc6 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 5.4E-23 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family CPU03_RS01345 712e7a3c9037bb67ca47d7f3d1669fc6 114 Gene3D G3DSA:3.30.1330.40 2 114 2.7E-20 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CPU03_RS13250 9a1b32f2d6228e8cbd48da3ca25d6fca 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.1 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 CPU03_RS13250 9a1b32f2d6228e8cbd48da3ca25d6fca 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.9E-58 T 29-03-2018 IPR007334 Uncharacterised protein family UPF0208 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.0E-26 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 Gene3D G3DSA:3.30.930.10 7 327 5.2E-90 T 29-03-2018 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.4E-107 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 SUPERFAMILY SSF46589 14 99 5.23E-22 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.8E-117 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 SUPERFAMILY SSF55681 92 327 4.18E-82 T 29-03-2018 CPU03_RS16790 9d4e54f8d417462f27e8f56d9d586aeb 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.912 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CPU03_RS06355 46fcbc068d22bbbd26052f0e9eecbb07 303 Pfam PF02666 Phosphatidylserine decarboxylase 69 289 5.0E-58 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CPU03_RS06355 46fcbc068d22bbbd26052f0e9eecbb07 303 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 292 47.845 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CPU03_RS06355 46fcbc068d22bbbd26052f0e9eecbb07 303 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 56 289 5.0E-84 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 Gene3D G3DSA:3.50.50.60 1 362 4.2E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 6.6E-21 T 29-03-2018 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 6.6E-21 T 29-03-2018 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 6.6E-21 T 29-03-2018 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 6.6E-21 T 29-03-2018 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 2.6E-132 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 SUPERFAMILY SSF51905 265 382 1.21E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 SUPERFAMILY SSF51905 4 174 1.21E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10605 e9266c2a4667c76002951125b2268877 404 Pfam PF01494 FAD binding domain 5 344 5.6E-32 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 CPU03_RS11825 9745506b64fcdfc77d5d52023fb98291 154 Pfam PF07670 Nucleoside recognition 30 115 9.8E-6 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CPU03_RS14500 b479205b05ce179930abc631eb85af5a 699 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 693 1.9E-253 T 29-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH CPU03_RS03595 023d25130ee7dd1562b971b500cdd560 76 Pfam PF07869 Protein of unknown function (DUF1656) 18 67 3.8E-11 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CPU03_RS14005 8232ec99b0b989592d18de9b1fc94879 336 Gene3D G3DSA:3.40.50.720 1 180 1.8E-31 T 29-03-2018 CPU03_RS14005 8232ec99b0b989592d18de9b1fc94879 336 Gene3D G3DSA:3.90.25.10 181 336 2.9E-21 T 29-03-2018 CPU03_RS14005 8232ec99b0b989592d18de9b1fc94879 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 1.4E-29 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CPU03_RS14005 8232ec99b0b989592d18de9b1fc94879 336 SUPERFAMILY SSF51735 1 268 5.2E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS14005 8232ec99b0b989592d18de9b1fc94879 336 SUPERFAMILY SSF51735 296 332 5.2E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS14355 dd922b1a96e9be790c5ac3ac9a04faad 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.4E-63 T 29-03-2018 IPR010275 Protein of unknown function DUF882 CPU03_RS14355 dd922b1a96e9be790c5ac3ac9a04faad 182 Gene3D G3DSA:3.30.1380.10 55 182 1.3E-23 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS14355 dd922b1a96e9be790c5ac3ac9a04faad 182 SUPERFAMILY SSF55166 68 182 7.85E-33 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 Pfam PF00905 Penicillin binding protein transpeptidase domain 254 549 5.1E-74 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 213 1.6E-15 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 Gene3D G3DSA:3.90.1310.10 30 229 2.0E-35 T 29-03-2018 CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 SUPERFAMILY SSF56601 230 561 7.62E-81 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 Gene3D G3DSA:3.40.710.10 230 580 1.1E-72 T 29-03-2018 CPU03_RS01820 42fbc43645fcc80cc7bf54e713db48aa 582 SUPERFAMILY SSF56519 57 217 4.32E-35 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 PIRSF PIRSF036918 1 595 2.8E-219 T 29-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 Gene3D G3DSA:2.60.40.1180 510 594 1.4E-8 T 29-03-2018 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 Gene3D G3DSA:2.60.40.10 5 109 1.7E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 Gene3D G3DSA:3.20.20.80 112 509 5.4E-87 T 29-03-2018 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 Pfam PF00128 Alpha amylase, catalytic domain 163 479 1.4E-74 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 SUPERFAMILY SSF51445 112 516 1.28E-92 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 SMART SM00642 124 507 6.0E-82 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CPU03_RS03500 357a01f85d5fb419e25f1e50cde922d5 596 SUPERFAMILY SSF51011 516 594 3.53E-5 T 29-03-2018 CPU03_RS03955 465666df71bcc5c7bcbf1757a60cd75a 483 PIRSF PIRSF006060 1 482 3.4E-56 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03955 465666df71bcc5c7bcbf1757a60cd75a 483 Pfam PF13520 Amino acid permease 17 455 5.4E-60 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03955 465666df71bcc5c7bcbf1757a60cd75a 483 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 16 481 1.3E-207 T 29-03-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 Gene3D G3DSA:1.10.10.10 1 101 4.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 SUPERFAMILY SSF46785 15 101 7.86E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 SMART SM00418 19 98 1.2E-21 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 Pfam PF01022 Bacterial regulatory protein, arsR family 26 73 1.0E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 1.8E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.8E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS12915 c6e53556862159e9143baac5e789b7e7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.8E-7 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CPU03_RS09580 b0f2545eef1b27a0f587d93ad9ee2bb2 89 Pfam PF07369 Protein of unknown function (DUF1488) 5 87 4.1E-22 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CPU03_RS09580 b0f2545eef1b27a0f587d93ad9ee2bb2 89 Gene3D G3DSA:3.30.160.140 5 86 4.4E-26 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CPU03_RS09580 b0f2545eef1b27a0f587d93ad9ee2bb2 89 SUPERFAMILY SSF160272 1 87 8.24E-25 T 29-03-2018 IPR009962 Protein of unknown function DUF1488 CPU03_RS02900 cd25c9cb2093ef14861a47cf039ca6bb 156 Gene3D G3DSA:3.40.30.10 1 154 1.8E-40 T 29-03-2018 CPU03_RS02900 cd25c9cb2093ef14861a47cf039ca6bb 156 SUPERFAMILY SSF52833 3 154 1.37E-47 T 29-03-2018 IPR012336 Thioredoxin-like fold CPU03_RS02900 cd25c9cb2093ef14861a47cf039ca6bb 156 Pfam PF00578 AhpC/TSA family 7 134 5.0E-37 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 Gene3D G3DSA:3.50.50.60 2 365 2.1E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 SUPERFAMILY SSF54373 181 284 2.12E-23 T 29-03-2018 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.9E-7 T 29-03-2018 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 6.9E-7 T 29-03-2018 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 6.9E-7 T 29-03-2018 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 Pfam PF01134 Glucose inhibited division protein A 7 162 9.7E-9 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 SUPERFAMILY SSF51905 5 179 8.32E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS12105 07ec73a251f4e13bc24f1d7d7d804f1e 430 SUPERFAMILY SSF51905 284 375 8.32E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10870 10e3805f6dd6be1131ddc9b4951ba7b9 312 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 199 212 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10870 10e3805f6dd6be1131ddc9b4951ba7b9 312 Pfam PF00146 NADH dehydrogenase 13 305 7.6E-48 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS03390 9fa9823bedc43ea0e31bd5f67385c2ab 261 Pfam PF10670 Domain of unknown function (DUF4198) 21 238 1.1E-37 T 29-03-2018 IPR019613 Protein of unknown function DUF4198 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 SUPERFAMILY SSF46548 7 157 5.23E-39 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 2.0E-38 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.0E-38 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 2.0E-38 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.0E-38 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.0E-38 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 SUPERFAMILY SSF51971 146 401 4.06E-65 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 26 133 1.8E-37 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Gene3D G3DSA:3.40.50.720 145 242 1.1E-17 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Gene3D G3DSA:1.10.1060.10 2 144 3.7E-41 T 29-03-2018 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 3.6E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.2E-247 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Gene3D G3DSA:3.50.50.60 403 471 1.1E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Gene3D G3DSA:3.50.50.60 315 401 3.1E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS05220 0d9f37813ae44e9410fc25829f072154 472 Gene3D G3DSA:3.50.50.60 243 314 5.8E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 SMART SM00098 74 480 2.2E-192 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 PRINTS PR00113 Alkaline phosphatase signature 130 145 3.3E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 PRINTS PR00113 Alkaline phosphatase signature 230 240 3.3E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 PRINTS PR00113 Alkaline phosphatase signature 328 357 3.3E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 PRINTS PR00113 Alkaline phosphatase signature 73 93 3.3E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 PRINTS PR00113 Alkaline phosphatase signature 167 187 3.3E-49 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 SUPERFAMILY SSF53649 49 479 1.89E-129 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 ProSitePatterns PS00123 Alkaline phosphatase active site. 130 138 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 Gene3D G3DSA:3.40.720.10 31 485 1.6E-124 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 Pfam PF00245 Alkaline phosphatase 73 438 7.6E-119 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS10905 bd975c9ef9c77fd13a197bf4485faf09 485 Pfam PF00245 Alkaline phosphatase 439 478 9.8E-7 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CPU03_RS13510 8c07ee157bedca22a950bc6c9fc58c45 107 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 60 68 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CPU03_RS13510 8c07ee157bedca22a950bc6c9fc58c45 107 Gene3D G3DSA:3.10.20.30 2 106 1.3E-15 T 29-03-2018 IPR012675 Beta-grasp domain CPU03_RS13510 8c07ee157bedca22a950bc6c9fc58c45 107 SUPERFAMILY SSF54292 12 107 8.78E-20 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS13510 8c07ee157bedca22a950bc6c9fc58c45 107 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 99 1.2E-9 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CPU03_RS08950 0372a776a4db55db0ec67b310fa1cca7 320 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 22 319 5.9E-131 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CPU03_RS08950 0372a776a4db55db0ec67b310fa1cca7 320 PIRSF PIRSF003097 19 316 1.2E-95 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CPU03_RS08950 0372a776a4db55db0ec67b310fa1cca7 320 Pfam PF02687 FtsX-like permease family 221 310 1.0E-5 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CPU03_RS00130 57ec0f7f899ca889fca44a7c982ce33b 109 Pfam PF05939 Phage minor tail protein 2 107 1.5E-34 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail CPU03_RS12450 b3e2161ef982055ca0efce7ffa9d9bae 565 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.132 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CPU03_RS12450 b3e2161ef982055ca0efce7ffa9d9bae 565 PIRSF PIRSF001294 1 560 1.3E-235 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CPU03_RS12450 b3e2161ef982055ca0efce7ffa9d9bae 565 Gene3D G3DSA:1.10.287.70 52 508 0.015 T 29-03-2018 CPU03_RS12450 b3e2161ef982055ca0efce7ffa9d9bae 565 Pfam PF03814 Potassium-transporting ATPase A subunit 11 556 4.8E-238 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CPU03_RS12450 b3e2161ef982055ca0efce7ffa9d9bae 565 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 558 3.6E-252 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CPU03_RS01675 48c4258a6bcb5d5cee9e81a0c4194f09 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 1.6E-58 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 Gene3D G3DSA:3.40.1050.10 1 220 8.7E-75 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 SUPERFAMILY SSF53056 1 213 2.75E-76 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 SMART SM00947 30 192 5.4E-68 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS04510 ee9f18d6a6eff8856d14105b9031745f 220 Pfam PF00484 Carbonic anhydrase 38 188 5.2E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 Gene3D G3DSA:3.40.640.10 2 247 2.2E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 PIRSF PIRSF001434 1 380 2.4E-140 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 379 1.6E-142 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 SUPERFAMILY SSF53383 18 380 2.2E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CPU03_RS15520 4c619cfa1780d8d569b2184156b07ce1 380 Gene3D G3DSA:3.90.1150.10 249 380 1.1E-49 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CPU03_RS08415 b458953274258797b9d5ca79a1b46113 289 Gene3D G3DSA:3.40.630.30 125 286 5.3E-11 T 29-03-2018 CPU03_RS08415 b458953274258797b9d5ca79a1b46113 289 SUPERFAMILY SSF55729 134 279 2.42E-10 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS08415 b458953274258797b9d5ca79a1b46113 289 Pfam PF07395 Mig-14 37 284 1.7E-35 T 29-03-2018 IPR009977 Mig-14 CPU03_RS13210 3dbead9dd63ef74cfe54e74994afbb8b 124 SMART SM00905 10 120 5.2E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS13210 3dbead9dd63ef74cfe54e74994afbb8b 124 Pfam PF02152 Dihydroneopterin aldolase 10 118 3.4E-24 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS13210 3dbead9dd63ef74cfe54e74994afbb8b 124 TIGRFAM TIGR00526 folB_dom: FolB domain 9 123 3.5E-34 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CPU03_RS13210 3dbead9dd63ef74cfe54e74994afbb8b 124 Gene3D G3DSA:3.30.1130.10 3 122 3.6E-28 T 29-03-2018 CPU03_RS13210 3dbead9dd63ef74cfe54e74994afbb8b 124 SUPERFAMILY SSF55620 9 122 1.28E-28 T 29-03-2018 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 Gene3D G3DSA:3.40.190.10 142 278 3.3E-31 T 29-03-2018 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 18 331 5.1E-150 T 29-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 23 325 4.5E-135 T 29-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 SUPERFAMILY SSF53850 26 326 3.52E-63 T 29-03-2018 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 Gene3D G3DSA:3.40.190.10 25 141 1.2E-8 T 29-03-2018 CPU03_RS04775 142818eca25b2b198d3d47fc4cac6f1f 331 Pfam PF13416 Bacterial extracellular solute-binding protein 46 301 3.9E-16 T 29-03-2018 CPU03_RS06420 f7fc607bae9772181e24aab5b744f92f 231 Pfam PF02589 LUD domain 67 227 1.1E-24 T 29-03-2018 IPR003741 LUD domain CPU03_RS06420 f7fc607bae9772181e24aab5b744f92f 231 SUPERFAMILY SSF100950 42 229 2.76E-37 T 29-03-2018 CPU03_RS06420 f7fc607bae9772181e24aab5b744f92f 231 Gene3D G3DSA:3.40.50.10420 40 229 2.1E-36 T 29-03-2018 CPU03_RS05940 9c53e5f1772b6863ccbb5b657e3545d3 172 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 28 165 31.793 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 CPU03_RS05940 9c53e5f1772b6863ccbb5b657e3545d3 172 SUPERFAMILY SSF50475 27 163 3.93E-20 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS05940 9c53e5f1772b6863ccbb5b657e3545d3 172 PIRSF PIRSF009554 25 170 2.3E-56 T 29-03-2018 IPR011194 Uncharacterised protein family UPF0306 CPU03_RS05940 9c53e5f1772b6863ccbb5b657e3545d3 172 Gene3D G3DSA:2.30.110.10 3 170 6.2E-18 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CPU03_RS05940 9c53e5f1772b6863ccbb5b657e3545d3 172 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 103 1.0E-4 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CPU03_RS03795 ccc02324f8492c0a694a178d2f02b237 421 SUPERFAMILY SSF103473 6 404 1.31E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS03795 ccc02324f8492c0a694a178d2f02b237 421 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 407 6.2E-181 T 29-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CPU03_RS03795 ccc02324f8492c0a694a178d2f02b237 421 Gene3D G3DSA:1.20.1250.20 2 195 7.7E-15 T 29-03-2018 CPU03_RS03795 ccc02324f8492c0a694a178d2f02b237 421 Gene3D G3DSA:1.20.1250.20 200 411 1.6E-21 T 29-03-2018 CPU03_RS03795 ccc02324f8492c0a694a178d2f02b237 421 Pfam PF03825 Nucleoside H+ symporter 1 404 9.5E-174 T 29-03-2018 CPU03_RS08475 72ce897f6c787cca0f6aff12de6244f1 80 Pfam PF06005 Cell division protein ZapB 1 78 1.4E-27 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CPU03_RS08475 72ce897f6c787cca0f6aff12de6244f1 80 Gene3D G3DSA:1.20.5.370 13 48 8.5E-14 T 29-03-2018 CPU03_RS08475 72ce897f6c787cca0f6aff12de6244f1 80 Gene3D G3DSA:1.20.5.370 49 80 1.6E-11 T 29-03-2018 CPU03_RS08475 72ce897f6c787cca0f6aff12de6244f1 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.833 T 29-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CPU03_RS05705 ff9017e0a4b30ad921949f8c4545c999 590 Gene3D G3DSA:1.10.10.10 1 77 5.1E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS05705 ff9017e0a4b30ad921949f8c4545c999 590 Pfam PF03237 Terminase-like family 169 390 4.8E-52 T 29-03-2018 CPU03_RS05705 ff9017e0a4b30ad921949f8c4545c999 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 65 4.7E-17 T 29-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 CPU03_RS05705 ff9017e0a4b30ad921949f8c4545c999 590 Pfam PF17289 Terminase RNaseH-like domain 417 575 6.6E-30 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like CPU03_RS00225 0baf0a3ee4bc7d63b183ea57b3352536 172 Pfam PF04383 KilA-N domain 10 106 2.5E-10 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding CPU03_RS00225 0baf0a3ee4bc7d63b183ea57b3352536 172 SMART SM01252 9 110 8.0E-19 T 29-03-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 Gene3D G3DSA:3.30.950.10 129 249 2.7E-29 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 255 5.0E-97 T 29-03-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 Gene3D G3DSA:3.40.1010.10 8 128 6.2E-27 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 1.2E-42 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CPU03_RS15050 a6b3a973da528282d42f06a8c06c8566 257 SUPERFAMILY SSF53790 8 255 4.32E-67 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS06195 d6d1fe463d6674a8a5c6c95c6410170a 211 Gene3D G3DSA:3.10.350.10 116 199 7.2E-4 T 29-03-2018 CPU03_RS06195 d6d1fe463d6674a8a5c6c95c6410170a 211 Pfam PF04225 Opacity-associated protein A LysM-like domain 126 209 4.4E-30 T 29-03-2018 IPR007340 Opacity-associated protein A CPU03_RS06195 d6d1fe463d6674a8a5c6c95c6410170a 211 Pfam PF08525 Opacity-associated protein A N-terminal motif 65 91 1.5E-8 T 29-03-2018 IPR013731 Opacity-associated protein A, N-terminal CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 Gene3D G3DSA:3.20.20.70 3 133 2.7E-11 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 6.6E-62 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 SUPERFAMILY SSF102114 14 114 1.57E-7 T 29-03-2018 CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 PIRSF PIRSF000368 1 154 1.6E-58 T 29-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 29-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CPU03_RS05930 405e28cf5456d50a18d95c69dfee1188 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.1E-50 T 29-03-2018 CPU03_RS02090 fafdbc7a5f1c6081a0837e8c6b8ad38d 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-21 T 29-03-2018 IPR007040 Ribosome modulation factor CPU03_RS02090 fafdbc7a5f1c6081a0837e8c6b8ad38d 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.635 T 29-03-2018 IPR007040 Ribosome modulation factor CPU03_RS02090 fafdbc7a5f1c6081a0837e8c6b8ad38d 57 Pfam PF04957 Ribosome modulation factor 1 52 2.0E-29 T 29-03-2018 IPR007040 Ribosome modulation factor CPU03_RS02090 fafdbc7a5f1c6081a0837e8c6b8ad38d 57 Gene3D G3DSA:1.10.10.620 3 53 2.5E-24 T 29-03-2018 CPU03_RS14035 addf48c6ecc6adf2988a276c33efb690 231 SUPERFAMILY SSF49401 34 139 1.99E-7 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS14035 addf48c6ecc6adf2988a276c33efb690 231 Gene3D G3DSA:2.60.40.1090 33 198 2.0E-9 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS02800 784812dcf98ffe90adb8e944fe6fecee 148 PIRSF PIRSF006105 2 148 4.0E-51 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CPU03_RS02800 784812dcf98ffe90adb8e944fe6fecee 148 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 36 141 3.4E-44 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CPU03_RS02800 784812dcf98ffe90adb8e944fe6fecee 148 SUPERFAMILY SSF48695 47 143 3.26E-40 T 29-03-2018 IPR011031 Multihaem cytochrome CPU03_RS02800 784812dcf98ffe90adb8e944fe6fecee 148 Gene3D G3DSA:1.10.1130.10 61 127 4.2E-29 T 29-03-2018 CPU03_RS02515 aa6902073633e050472ae2a5fe5c9433 315 Pfam PF00892 EamA-like transporter family 6 137 1.0E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS02515 aa6902073633e050472ae2a5fe5c9433 315 Pfam PF00892 EamA-like transporter family 149 280 2.7E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS02515 aa6902073633e050472ae2a5fe5c9433 315 TIGRFAM TIGR00688 rarD: protein RarD 6 257 7.7E-52 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CPU03_RS02515 aa6902073633e050472ae2a5fe5c9433 315 SUPERFAMILY SSF103481 205 281 2.09E-9 T 29-03-2018 CPU03_RS02515 aa6902073633e050472ae2a5fe5c9433 315 SUPERFAMILY SSF103481 39 138 5.23E-10 T 29-03-2018 CPU03_RS05890 22775daae50b5f69c880946365ef164c 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.407 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CPU03_RS05890 22775daae50b5f69c880946365ef164c 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 4.1E-25 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CPU03_RS05890 22775daae50b5f69c880946365ef164c 129 TIGRFAM TIGR00494 crcB: protein CrcB 8 123 2.5E-31 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CPU03_RS14165 9fb9959fcb6a1b9346d1737cb43a3768 286 Gene3D G3DSA:1.20.1630.10 3 283 1.3E-39 T 29-03-2018 CPU03_RS14165 9fb9959fcb6a1b9346d1737cb43a3768 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 3.1E-89 T 29-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CPU03_RS06405 c30563c86fa35fae411485f13482c6b8 517 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 511 1.2E-124 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CPU03_RS06405 c30563c86fa35fae411485f13482c6b8 517 Pfam PF02652 L-lactate permease 7 509 4.8E-129 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CPU03_RS17100 72de62cf0f69f73a64fd628311318332 455 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 376 9.8E-115 T 29-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CPU03_RS09330 cc4fe3e9a9f1e3570ac8a07093d8f571 275 Gene3D G3DSA:1.10.287.460 28 135 2.4E-30 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CPU03_RS09330 cc4fe3e9a9f1e3570ac8a07093d8f571 275 SUPERFAMILY SSF54534 44 251 2.16E-65 T 29-03-2018 CPU03_RS09330 cc4fe3e9a9f1e3570ac8a07093d8f571 275 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 248 1.1E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CPU03_RS09330 cc4fe3e9a9f1e3570ac8a07093d8f571 275 Gene3D G3DSA:3.10.50.40 136 252 8.1E-42 T 29-03-2018 CPU03_RS09330 cc4fe3e9a9f1e3570ac8a07093d8f571 275 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 154 2.4E-38 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CPU03_RS03975 c27d44974d998cd2307f88bc1b194448 255 Gene3D G3DSA:3.60.20.10 1 254 1.5E-46 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS03975 c27d44974d998cd2307f88bc1b194448 255 SUPERFAMILY SSF56235 2 252 7.03E-51 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CPU03_RS03975 c27d44974d998cd2307f88bc1b194448 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 2.4E-113 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 5.9E-14 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 5.9E-14 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-14 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 5.9E-14 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.7E-7 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.7E-7 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.7E-7 T 29-03-2018 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 SUPERFAMILY SSF51905 4 349 1.09E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 Gene3D G3DSA:3.50.50.60 167 370 1.2E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 9.6E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CPU03_RS14705 13b6a32334b24f7779ed0541f7d9632c 434 Gene3D G3DSA:3.40.50.720 1 154 1.2E-13 T 29-03-2018 CPU03_RS04330 1b7f5cdc81db25417c5afe502f0a9ee1 93 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 18 93 3.0E-14 T 29-03-2018 IPR022204 Prepilin peptidase dependent protein C CPU03_RS08295 5965565ef4755e681d652e4f3adf6aa0 218 Pfam PF02592 Putative vitamin uptake transporter 43 199 3.4E-36 T 29-03-2018 IPR003744 Queuosine precursor transporter CPU03_RS08295 5965565ef4755e681d652e4f3adf6aa0 218 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 1.0E-61 T 29-03-2018 IPR003744 Queuosine precursor transporter CPU03_RS10775 3f5943bf849fe37cc8c4e0aef9c2880a 294 SUPERFAMILY SSF56935 244 292 6.71E-5 T 29-03-2018 CPU03_RS10775 3f5943bf849fe37cc8c4e0aef9c2880a 294 SUPERFAMILY SSF56935 55 196 6.71E-5 T 29-03-2018 CPU03_RS10775 3f5943bf849fe37cc8c4e0aef9c2880a 294 Gene3D G3DSA:2.40.160.40 19 294 6.6E-31 T 29-03-2018 CPU03_RS10775 3f5943bf849fe37cc8c4e0aef9c2880a 294 Pfam PF16946 OMPG-porin 1 family 125 282 6.6E-9 T 29-03-2018 IPR031605 Putative OMPG-porin 1 family CPU03_RS16260 3054fc08437cad3e0e66d9d0949f35cc 440 Pfam PF13726 Na+-H+ antiporter family 2 88 2.6E-34 T 29-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CPU03_RS16260 3054fc08437cad3e0e66d9d0949f35cc 440 Pfam PF03553 Na+/H+ antiporter family 150 434 1.8E-73 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CPU03_RS10090 c7867fe553340fe2f7876ebd75b8187d 290 Gene3D G3DSA:3.40.1800.10 160 233 4.6E-8 T 29-03-2018 CPU03_RS10090 c7867fe553340fe2f7876ebd75b8187d 290 PIRSF PIRSF030850 1 290 2.3E-109 T 29-03-2018 IPR011396 Uncharacterised conserved protein UCP030850 CPU03_RS10090 c7867fe553340fe2f7876ebd75b8187d 290 Pfam PF13391 HNH endonuclease 182 236 1.6E-5 T 29-03-2018 IPR003615 HNH nuclease CPU03_RS04480 766f571e7ed57db68d26eb5c98588eed 393 Gene3D G3DSA:3.40.50.10490 15 199 2.1E-27 T 29-03-2018 CPU03_RS04480 766f571e7ed57db68d26eb5c98588eed 393 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 18 381 1.1E-159 T 29-03-2018 IPR014180 Sugar isomerase, AgaS GO:0016861 CPU03_RS04480 766f571e7ed57db68d26eb5c98588eed 393 Gene3D G3DSA:3.40.50.10490 216 371 3.3E-20 T 29-03-2018 CPU03_RS04480 766f571e7ed57db68d26eb5c98588eed 393 Pfam PF01380 SIS domain 54 192 3.9E-16 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CPU03_RS04480 766f571e7ed57db68d26eb5c98588eed 393 SUPERFAMILY SSF53697 20 372 7.79E-51 T 29-03-2018 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 Pfam PF01220 Dehydroquinase class II 6 142 8.5E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 Gene3D G3DSA:3.40.50.9100 2 149 2.9E-69 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 SUPERFAMILY SSF52304 3 146 2.62E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 73.736 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 145 3.9E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 7.0E-55 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS09860 ffc91d336887bc28595293e3070b325b 150 PIRSF PIRSF001399 3 149 1.2E-59 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CPU03_RS01280 379ea00d156814ac61629ab51645a468 176 Gene3D G3DSA:1.20.1550.10 1 176 3.4E-54 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CPU03_RS01280 379ea00d156814ac61629ab51645a468 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.58 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB CPU03_RS01280 379ea00d156814ac61629ab51645a468 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.2E-44 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CPU03_RS01280 379ea00d156814ac61629ab51645a468 176 SUPERFAMILY SSF158442 15 161 8.5E-45 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CPU03_RS05005 d7eb10e36de9960d3551301dd0ed6480 238 PIRSF PIRSF004808 1 230 2.6E-60 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS05005 d7eb10e36de9960d3551301dd0ed6480 238 SUPERFAMILY SSF75217 2 156 3.14E-30 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases CPU03_RS05005 d7eb10e36de9960d3551301dd0ed6480 238 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 225 1.4E-65 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CPU03_RS05005 d7eb10e36de9960d3551301dd0ed6480 238 Pfam PF00588 SpoU rRNA Methylase family 3 153 1.3E-32 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CPU03_RS05005 d7eb10e36de9960d3551301dd0ed6480 238 Gene3D G3DSA:3.40.1280.10 1 164 1.6E-32 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CPU03_RS07165 c8890d255bef4c4f8b68abb6ce2f923d 182 Pfam PF12724 Flavodoxin domain 4 151 1.6E-49 T 29-03-2018 IPR026816 Flavodoxin domain CPU03_RS07165 c8890d255bef4c4f8b68abb6ce2f923d 182 SUPERFAMILY SSF52218 1 172 1.49E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS07165 c8890d255bef4c4f8b68abb6ce2f923d 182 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CPU03_RS07165 c8890d255bef4c4f8b68abb6ce2f923d 182 Gene3D G3DSA:3.40.50.360 2 173 3.1E-19 T 29-03-2018 IPR029039 Flavoprotein-like domain CPU03_RS15910 5b5fc5ffd55abb3f0c95b1f6860e4d2b 101 Gene3D G3DSA:3.30.50.20 27 98 1.6E-19 T 29-03-2018 CPU03_RS15910 5b5fc5ffd55abb3f0c95b1f6860e4d2b 101 Pfam PF07102 Protein of unknown function (DUF1364) 11 94 6.9E-35 T 29-03-2018 IPR010774 Protein of unknown function DUF1364 CPU03_RS05375 2fecf354d6351c6192dfcbf2fdf289be 283 PIRSF PIRSF005052 1 283 3.5E-115 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CPU03_RS05375 2fecf354d6351c6192dfcbf2fdf289be 283 Gene3D G3DSA:3.40.50.300 1 152 2.3E-11 T 29-03-2018 CPU03_RS05375 2fecf354d6351c6192dfcbf2fdf289be 283 SUPERFAMILY SSF52540 2 151 1.27E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05375 2fecf354d6351c6192dfcbf2fdf289be 283 Pfam PF03668 P-loop ATPase protein family 1 282 7.9E-143 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CPU03_RS05375 2fecf354d6351c6192dfcbf2fdf289be 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.061 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 21 44 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 295 314 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 93 113 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 48 67 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 329 347 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 350 369 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 195 217 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 234 253 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 PRINTS PR00166 Aromatic amino acid permease signature 157 177 7.8E-98 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 18 397 1.0E-144 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13760 9c56f394e669581866b986ec859f44c8 416 Pfam PF03222 Tryptophan/tyrosine permease family 13 404 2.6E-141 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CPU03_RS08735 f313ef113077d3f65ddcac335c96b906 257 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 32 247 3.6E-80 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CPU03_RS08735 f313ef113077d3f65ddcac335c96b906 257 PIRSF PIRSF001273 6 252 1.7E-73 T 29-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CPU03_RS08735 f313ef113077d3f65ddcac335c96b906 257 Gene3D G3DSA:3.30.428.30 30 247 5.2E-77 T 29-03-2018 CPU03_RS08735 f313ef113077d3f65ddcac335c96b906 257 SUPERFAMILY SSF54197 32 246 1.38E-75 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS08960 e8a334f177292bc42a2925570e484bc7 374 Pfam PF13556 PucR C-terminal helix-turn-helix domain 314 371 2.6E-20 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CPU03_RS08960 e8a334f177292bc42a2925570e484bc7 374 Gene3D G3DSA:1.10.10.60 296 350 1.2E-7 T 29-03-2018 CPU03_RS08960 e8a334f177292bc42a2925570e484bc7 374 Pfam PF05651 Putative sugar diacid recognition 6 139 1.2E-51 T 29-03-2018 IPR008599 Putative sugar diacid recognition CPU03_RS01350 b89f3c2b3844a1e74199a0a61ed1a056 109 SUPERFAMILY SSF103481 12 108 2.88E-17 T 29-03-2018 CPU03_RS01350 b89f3c2b3844a1e74199a0a61ed1a056 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 29.65 T 29-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 CPU03_RS01350 b89f3c2b3844a1e74199a0a61ed1a056 109 Pfam PF00893 Small Multidrug Resistance protein 8 99 8.1E-28 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CPU03_RS15060 ae5908111859944e6cb18ef2718fb7f9 228 SUPERFAMILY SSF53790 2 226 1.06E-50 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15060 ae5908111859944e6cb18ef2718fb7f9 228 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 1 227 9.9E-99 T 29-03-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CPU03_RS15060 ae5908111859944e6cb18ef2718fb7f9 228 Gene3D G3DSA:3.30.950.10 108 225 2.2E-52 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15060 ae5908111859944e6cb18ef2718fb7f9 228 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 195 5.7E-33 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS15060 ae5908111859944e6cb18ef2718fb7f9 228 Gene3D G3DSA:3.40.1010.10 1 107 5.4E-27 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CPU03_RS05740 acbdc429ec30cfa203a1064908cc4064 298 Gene3D G3DSA:3.40.50.150 1 183 6.2E-22 T 29-03-2018 CPU03_RS05740 acbdc429ec30cfa203a1064908cc4064 298 SUPERFAMILY SSF53335 50 181 5.37E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05740 acbdc429ec30cfa203a1064908cc4064 298 SUPERFAMILY SSF53335 234 291 5.37E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS05740 acbdc429ec30cfa203a1064908cc4064 298 Pfam PF00145 C-5 cytosine-specific DNA methylase 74 175 1.3E-11 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS04490 edc2641e185418e5fd32a7000710eea2 144 Gene3D G3DSA:3.40.50.510 1 138 4.4E-21 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS04490 edc2641e185418e5fd32a7000710eea2 144 Pfam PF03610 PTS system fructose IIA component 3 100 1.1E-19 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS04490 edc2641e185418e5fd32a7000710eea2 144 SUPERFAMILY SSF53062 1 108 7.98E-22 T 29-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CPU03_RS02865 f961d84b3b3773445f4a0c96a0f68ddf 68 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 60 3.7E-33 T 29-03-2018 IPR020910 Uncharacterised protein family UPF0370 CPU03_RS08270 f134acfd93694d7dde84c476843c73a6 196 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 181 2.6E-73 T 29-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CPU03_RS08270 f134acfd93694d7dde84c476843c73a6 196 SUPERFAMILY SSF48150 7 185 1.02E-71 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CPU03_RS08270 f134acfd93694d7dde84c476843c73a6 196 Gene3D G3DSA:1.10.340.30 6 183 5.2E-74 T 29-03-2018 CPU03_RS08270 f134acfd93694d7dde84c476843c73a6 196 Pfam PF03352 Methyladenine glycosylase 11 182 4.1E-70 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CPU03_RS03490 7dad23511e2790a001133751cdee966e 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 186 4.5E-29 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CPU03_RS03490 7dad23511e2790a001133751cdee966e 193 PIRSF PIRSF011489 1 193 6.3E-76 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CPU03_RS14040 17b92b21cf29f9a04bfaac2de55c22bd 226 SUPERFAMILY SSF49401 54 112 4.72E-6 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS14040 17b92b21cf29f9a04bfaac2de55c22bd 226 Gene3D G3DSA:2.60.40.1090 53 225 2.9E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12670 e2ae364cc60c7c66f1b391d2ec6d4934 271 Pfam PF02517 CAAX protease self-immunity 169 258 1.9E-18 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CPU03_RS00330 531cce6cd86ef7f23df071d88fef8db7 181 Pfam PF11188 Protein of unknown function (DUF2975) 60 180 1.4E-13 T 29-03-2018 IPR021354 Protein of unknown function DUF2975 CPU03_RS01525 8cfeefd85721662c5a630d30e784d43d 187 Pfam PF07273 Protein of unknown function (DUF1439) 28 179 1.2E-54 T 29-03-2018 IPR010835 Protein of unknown function DUF1439 CPU03_RS10355 ba2508ef39498e4bde008f3b44cfb2d4 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 64 149 3.0E-29 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal CPU03_RS10355 ba2508ef39498e4bde008f3b44cfb2d4 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 164 280 8.0E-52 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal CPU03_RS10355 ba2508ef39498e4bde008f3b44cfb2d4 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 69 139 2.0E-6 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal CPU03_RS10355 ba2508ef39498e4bde008f3b44cfb2d4 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 164 279 2.5E-33 T 29-03-2018 IPR006894 HupH hydrogenase expression protein, C-terminal CPU03_RS12270 6d40f1a3e14849cc2f266c3e01750691 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 237 2.7E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS12270 6d40f1a3e14849cc2f266c3e01750691 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 5.5E-14 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CPU03_RS12270 6d40f1a3e14849cc2f266c3e01750691 246 SUPERFAMILY SSF161098 24 223 1.57E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS12270 6d40f1a3e14849cc2f266c3e01750691 246 Gene3D G3DSA:1.10.3720.10 18 237 1.2E-36 T 29-03-2018 CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 Gene3D G3DSA:1.10.101.10 209 287 4.8E-21 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 Gene3D G3DSA:2.40.440.10 307 487 1.4E-22 T 29-03-2018 CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 Pfam PF03734 L,D-transpeptidase catalytic domain 310 476 2.8E-28 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 Pfam PF01471 Putative peptidoglycan binding domain 228 281 1.4E-9 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 SUPERFAMILY SSF47090 208 289 8.63E-17 T 29-03-2018 IPR002477 Peptidoglycan binding-like CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 SUPERFAMILY SSF141523 418 468 2.35E-19 T 29-03-2018 CPU03_RS14350 40d88f5e589824305b617cbc29e43935 550 SUPERFAMILY SSF141523 308 361 2.35E-19 T 29-03-2018 CPU03_RS11990 dea39c3e49b232a9b230c0c628811b98 626 Pfam PF02705 K+ potassium transporter 20 547 3.6E-202 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CPU03_RS11990 dea39c3e49b232a9b230c0c628811b98 626 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 11 626 30.842 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CPU03_RS09795 4b5ba2a81d24eed8df7035bb9d65a707 143 Pfam PF03788 LrgA family 31 122 8.9E-25 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 CPU03_RS00150 08c4c0f1a215854b59f44df2057e754b 256 Gene3D G3DSA:2.60.40.1080 123 256 7.7E-4 T 29-03-2018 CPU03_RS00150 08c4c0f1a215854b59f44df2057e754b 256 Pfam PF16461 Lambda phage tail tube protein, TTP 8 153 3.2E-43 T 29-03-2018 IPR032494 Lambda phage tail tube protein CPU03_RS07660 93895e760e365c5cc6e32ee8a63eed62 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.239 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS07660 93895e760e365c5cc6e32ee8a63eed62 78 Gene3D G3DSA:2.30.170.40 2 75 3.9E-28 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07660 93895e760e365c5cc6e32ee8a63eed62 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-28 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS07660 93895e760e365c5cc6e32ee8a63eed62 78 SUPERFAMILY SSF143800 1 77 6.47E-30 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07660 93895e760e365c5cc6e32ee8a63eed62 78 Pfam PF00830 Ribosomal L28 family 3 62 3.2E-25 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS02380 8148e92500505751154d8de27f7600ed 341 Pfam PF14897 EpsG family 18 335 1.7E-54 T 29-03-2018 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 SMART SM00357 5 69 4.4E-4 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-8 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 PRINTS PR00050 Cold shock protein signature 6 21 4.3E-8 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-8 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 6.8E-12 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 PIRSF PIRSF002599 1 69 1.3E-10 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 SUPERFAMILY SSF50249 3 67 1.25E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS14290 86adb5a235135301f6c51b4c372c111c 69 Gene3D G3DSA:2.40.50.140 4 69 1.0E-14 T 29-03-2018 CPU03_RS00200 4c31e998a76e9a8dfb8f28b3117c009b 639 Pfam PF05876 Phage terminase large subunit (GpA) 40 601 8.2E-149 T 29-03-2018 IPR008866 Bacteriophage lambda, GpA CPU03_RS12045 2f6aa46af8521637a12039830a1529d2 849 Pfam PF00577 Outer membrane usher protein 213 763 1.2E-168 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CPU03_RS12045 2f6aa46af8521637a12039830a1529d2 849 SUPERFAMILY SSF141729 27 170 4.05E-22 T 29-03-2018 CPU03_RS12045 2f6aa46af8521637a12039830a1529d2 849 Pfam PF13954 PapC N-terminal domain 28 195 5.4E-31 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CPU03_RS12045 2f6aa46af8521637a12039830a1529d2 849 Pfam PF13953 PapC C-terminal domain 774 830 7.1E-13 T 29-03-2018 IPR025949 PapC-like, C-terminal domain CPU03_RS12685 ad17c389657f1e05b93ed9aaf9e6625b 258 Pfam PF02698 DUF218 domain 35 172 2.1E-13 T 29-03-2018 IPR003848 Domain of unknown function DUF218 CPU03_RS12685 ad17c389657f1e05b93ed9aaf9e6625b 258 Gene3D G3DSA:1.10.3620.10 146 249 9.3E-39 T 29-03-2018 CPU03_RS09865 b8998aca7735ad87532d3576248907eb 199 Pfam PF01794 Ferric reductase like transmembrane component 49 160 1.2E-12 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CPU03_RS09865 b8998aca7735ad87532d3576248907eb 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 4 196 21.16 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CPU03_RS00485 f425ae6fac2801c213a085346bf896e2 323 SUPERFAMILY SSF50182 159 225 1.57E-16 T 29-03-2018 IPR010920 LSM domain CPU03_RS00485 f425ae6fac2801c213a085346bf896e2 323 Pfam PF00924 Mechanosensitive ion channel 118 308 1.7E-39 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS00485 f425ae6fac2801c213a085346bf896e2 323 Gene3D G3DSA:2.30.30.60 175 225 1.2E-14 T 29-03-2018 CPU03_RS00485 f425ae6fac2801c213a085346bf896e2 323 SUPERFAMILY SSF82861 75 157 1.44E-8 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CPU03_RS00975 f54ff75077375c2327f58dc3989e6610 586 Gene3D G3DSA:3.30.750.24 441 565 7.7E-16 T 29-03-2018 IPR002645 STAS domain CPU03_RS00975 f54ff75077375c2327f58dc3989e6610 586 Pfam PF01740 STAS domain 445 530 1.7E-12 T 29-03-2018 IPR002645 STAS domain CPU03_RS00975 f54ff75077375c2327f58dc3989e6610 586 SUPERFAMILY SSF52091 445 532 9.61E-9 T 29-03-2018 IPR002645 STAS domain CPU03_RS00975 f54ff75077375c2327f58dc3989e6610 586 Pfam PF00916 Sulfate permease family 26 385 9.6E-82 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CPU03_RS01370 2d3721f8809fbfa866009ba968408665 231 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 222 1.7E-55 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CPU03_RS01370 2d3721f8809fbfa866009ba968408665 231 SUPERFAMILY SSF100950 3 225 3.18E-55 T 29-03-2018 CPU03_RS01370 2d3721f8809fbfa866009ba968408665 231 Gene3D G3DSA:3.40.50.1360 2 230 5.9E-53 T 29-03-2018 CPU03_RS01370 2d3721f8809fbfa866009ba968408665 231 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 223 1.3E-57 T 29-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CPU03_RS16675 0239f05b8aaea37d9bdef4a111bb52c0 140 SUPERFAMILY SSF54637 11 137 7.47E-31 T 29-03-2018 IPR029069 HotDog domain CPU03_RS16675 0239f05b8aaea37d9bdef4a111bb52c0 140 Gene3D G3DSA:3.10.129.10 1 140 7.3E-30 T 29-03-2018 CPU03_RS16675 0239f05b8aaea37d9bdef4a111bb52c0 140 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 43.321 T 29-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 CPU03_RS16675 0239f05b8aaea37d9bdef4a111bb52c0 140 Pfam PF03061 Thioesterase superfamily 50 127 2.9E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CPU03_RS16675 0239f05b8aaea37d9bdef4a111bb52c0 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 1.5E-43 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CPU03_RS09000 a0c506b6837dfa6571ec972c417847c3 248 SUPERFAMILY SSF51695 5 240 5.76E-61 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CPU03_RS09000 a0c506b6837dfa6571ec972c417847c3 248 Gene3D G3DSA:3.20.20.190 4 243 1.4E-57 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CPU03_RS09000 a0c506b6837dfa6571ec972c417847c3 248 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 239 2.4E-35 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CPU03_RS02175 a3f34d799f585da573fc425df3943fa1 282 Gene3D G3DSA:3.40.50.850 35 281 3.0E-32 T 29-03-2018 CPU03_RS02175 a3f34d799f585da573fc425df3943fa1 282 Pfam PF00857 Isochorismatase family 74 268 5.0E-27 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS02175 a3f34d799f585da573fc425df3943fa1 282 SUPERFAMILY SSF52499 67 278 5.36E-31 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS16935 cc7d1aa4320a6679c3ad1e11dc724e79 76 Gene3D G3DSA:2.10.260.10 4 42 4.6E-10 T 29-03-2018 CPU03_RS16935 cc7d1aa4320a6679c3ad1e11dc724e79 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 44 5.3E-10 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CPU03_RS16935 cc7d1aa4320a6679c3ad1e11dc724e79 76 SUPERFAMILY SSF89447 3 68 4.97E-11 T 29-03-2018 CPU03_RS16935 cc7d1aa4320a6679c3ad1e11dc724e79 76 SMART SM00966 7 48 3.0E-5 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CPU03_RS15935 b94d4003e67efe2b2668e5578d428bdb 430 Gene3D G3DSA:1.20.5.50 167 285 2.0E-4 T 29-03-2018 CPU03_RS06245 b8d1ad74f8ea0513c856acae958253df 91 Gene3D G3DSA:3.30.1660.10 20 91 8.3E-18 T 29-03-2018 IPR025543 Dodecin-like CPU03_RS06245 b8d1ad74f8ea0513c856acae958253df 91 SUPERFAMILY SSF159871 8 91 4.45E-18 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS06245 b8d1ad74f8ea0513c856acae958253df 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 91 1.0E-14 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS05675 61e646c0091ceb050e3c672d8a29738c 246 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 136 6.5E-11 T 29-03-2018 IPR006522 Phage virion morphogensis protein CPU03_RS05675 61e646c0091ceb050e3c672d8a29738c 246 Pfam PF05069 Phage virion morphogenesis family 13 122 8.6E-6 T 29-03-2018 IPR006522 Phage virion morphogensis protein CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 Gene3D G3DSA:3.10.105.10 314 514 3.3E-55 T 29-03-2018 CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 465 2.8E-94 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 PIRSF PIRSF002741 2 544 1.5E-116 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 Gene3D G3DSA:3.40.190.10 178 313 3.5E-39 T 29-03-2018 CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 Gene3D G3DSA:3.90.76.10 65 177 1.8E-35 T 29-03-2018 CPU03_RS01040 0ad58fcd9f0fe53f6640974e8ede71bb 545 SUPERFAMILY SSF53850 37 527 1.43E-147 T 29-03-2018 CPU03_RS12255 1dcbf965578ced47f34e8d232fa28c08 319 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 301 8.8E-94 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS12255 1dcbf965578ced47f34e8d232fa28c08 319 SUPERFAMILY SSF53590 4 307 1.02E-103 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS12255 1dcbf965578ced47f34e8d232fa28c08 319 Gene3D G3DSA:3.90.245.10 2 311 1.1E-114 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CPU03_RS12255 1dcbf965578ced47f34e8d232fa28c08 319 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CPU03_RS12255 1dcbf965578ced47f34e8d232fa28c08 319 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 63.366 T 29-03-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 CPU03_RS16280 cf835d9d1f20fbd4e10957b635d7b5e9 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.3E-9 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CPU03_RS11500 f6f41f88c765cabaa07f0fde2c98e545 203 Pfam PF03458 UPF0126 domain 92 162 1.6E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CPU03_RS11500 f6f41f88c765cabaa07f0fde2c98e545 203 Pfam PF03458 UPF0126 domain 4 78 3.4E-23 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CPU03_RS03875 e1d0a4af2f868f9763b69ebf6bcc738d 191 Pfam PF07455 Phage polarity suppression protein (Psu) 6 185 9.1E-42 T 29-03-2018 IPR010006 Bacteriophage P4, Psu, polarity suppression protein CPU03_RS03875 e1d0a4af2f868f9763b69ebf6bcc738d 191 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 67 189 0.009 T 29-03-2018 CPU03_RS03875 e1d0a4af2f868f9763b69ebf6bcc738d 191 Gene3D G3DSA:3.40.630.30 2 177 0.019 T 29-03-2018 CPU03_RS16815 9a30680db8e7045ef2dcfaa5fa40aa00 664 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 502 1.7E-191 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CPU03_RS16815 9a30680db8e7045ef2dcfaa5fa40aa00 664 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CPU03_RS16815 9a30680db8e7045ef2dcfaa5fa40aa00 664 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 504 2.9E-161 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 29-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 386 1.1E-134 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.8E-90 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CPU03_RS13460 25ca45d06754424a413ea5e8e2015a59 405 Pfam PF03222 Tryptophan/tyrosine permease family 3 392 2.4E-130 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CPU03_RS07290 9b579bec80b3f03139188f4228f665e9 338 Gene3D G3DSA:2.40.160.20 78 335 8.0E-7 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS17175 9ed1c3c3c1520548e1d7f40bc00fc3e9 188 Pfam PF05309 TraE protein 1 182 7.7E-58 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CPU03_RS17175 9ed1c3c3c1520548e1d7f40bc00fc3e9 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 4.5E-57 T 29-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CPU03_RS01150 5124593b3f216e5e1ec6520105824151 211 Gene3D G3DSA:3.40.50.850 1 208 1.0E-62 T 29-03-2018 CPU03_RS01150 5124593b3f216e5e1ec6520105824151 211 Pfam PF00857 Isochorismatase family 4 204 7.6E-36 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS01150 5124593b3f216e5e1ec6520105824151 211 SUPERFAMILY SSF52499 2 207 1.44E-54 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CPU03_RS10700 9a7335bf08276e6138696ccc3e9ca16c 646 Gene3D G3DSA:1.10.443.10 394 620 1.7E-17 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS10700 9a7335bf08276e6138696ccc3e9ca16c 646 SUPERFAMILY SSF56349 261 317 3.83E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS10700 9a7335bf08276e6138696ccc3e9ca16c 646 SUPERFAMILY SSF56349 347 604 3.83E-33 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CPU03_RS10700 9a7335bf08276e6138696ccc3e9ca16c 646 Gene3D G3DSA:1.10.150.130 254 392 8.4E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal CPU03_RS10700 9a7335bf08276e6138696ccc3e9ca16c 646 Pfam PF00589 Phage integrase family 439 603 4.7E-8 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CPU03_RS16760 666865a3507e63b1f071fa9753316ab1 162 Pfam PF00877 NlpC/P60 family 55 161 4.9E-28 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CPU03_RS16760 666865a3507e63b1f071fa9753316ab1 162 Gene3D G3DSA:3.90.1720.10 42 162 9.0E-34 T 29-03-2018 CPU03_RS16760 666865a3507e63b1f071fa9753316ab1 162 SUPERFAMILY SSF54001 42 162 5.23E-38 T 29-03-2018 CPU03_RS05050 fa4d38df8a9a4a5e649f9ca082fc4170 553 Pfam PF00924 Mechanosensitive ion channel 304 505 1.2E-29 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CPU03_RS05050 fa4d38df8a9a4a5e649f9ca082fc4170 553 Gene3D G3DSA:2.30.30.60 364 413 2.0E-12 T 29-03-2018 CPU03_RS05050 fa4d38df8a9a4a5e649f9ca082fc4170 553 SUPERFAMILY SSF82689 420 512 1.83E-9 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CPU03_RS05050 fa4d38df8a9a4a5e649f9ca082fc4170 553 SUPERFAMILY SSF50182 347 412 6.87E-13 T 29-03-2018 IPR010920 LSM domain CPU03_RS05050 fa4d38df8a9a4a5e649f9ca082fc4170 553 Gene3D G3DSA:3.30.70.100 415 510 8.1E-9 T 29-03-2018 CPU03_RS01070 b963204c69daecf75a7ba85361f653db 303 Gene3D G3DSA:3.90.550.10 1 303 2.5E-58 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS01070 b963204c69daecf75a7ba85361f653db 303 SUPERFAMILY SSF53448 9 294 1.87E-63 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS01070 b963204c69daecf75a7ba85361f653db 303 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 5.2E-117 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CPU03_RS01070 b963204c69daecf75a7ba85361f653db 303 Pfam PF00483 Nucleotidyl transferase 10 278 2.8E-25 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS14810 9a6edc63740685ca98d24745dfc4923c 109 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 107 2.0E-16 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC CPU03_RS14810 9a6edc63740685ca98d24745dfc4923c 109 Pfam PF06942 GlpM protein 5 109 1.1E-44 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC CPU03_RS05280 fb24a69da2c8e8fcb6debcc6630ad773 130 Pfam PF06295 Protein of unknown function (DUF1043) 6 125 3.2E-49 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CPU03_RS05280 fb24a69da2c8e8fcb6debcc6630ad773 130 PIRSF PIRSF006318 1 130 1.5E-51 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 CPU03_RS10185 e97432574cdcbc6a2bf1d680a05569da 372 SUPERFAMILY SSF46894 288 345 1.6E-5 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CPU03_RS10185 e97432574cdcbc6a2bf1d680a05569da 372 Gene3D G3DSA:1.10.10.10 289 358 2.2E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS04630 acd8e62fe9778b748af256a6047d2f19 163 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 159 3.0E-23 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CPU03_RS04630 acd8e62fe9778b748af256a6047d2f19 163 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 159 2.5E-31 T 29-03-2018 IPR009502 Secretion monitor GO:0045182 CPU03_RS13375 7cf9fb64669a0e87662b7d1c6ea12690 178 Pfam PF01292 Prokaryotic cytochrome b561 3 173 3.8E-19 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CPU03_RS13375 7cf9fb64669a0e87662b7d1c6ea12690 178 SUPERFAMILY SSF81342 2 174 1.1E-28 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CPU03_RS13375 7cf9fb64669a0e87662b7d1c6ea12690 178 Gene3D G3DSA:1.20.950.20 1 178 1.1E-24 T 29-03-2018 CPU03_RS06425 c5a5693fa9e0967415ff83d973653821 119 Pfam PF13698 Domain of unknown function (DUF4156) 27 117 4.1E-31 T 29-03-2018 IPR025294 Protein of unknown function DUF4156 CPU03_RS04515 ddf0c299534c12614292ca70d3d218e1 178 Gene3D G3DSA:3.40.50.2020 2 177 1.2E-42 T 29-03-2018 CPU03_RS04515 ddf0c299534c12614292ca70d3d218e1 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 6.2E-25 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CPU03_RS04515 ddf0c299534c12614292ca70d3d218e1 178 SUPERFAMILY SSF53271 3 173 3.2E-53 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like CPU03_RS04515 ddf0c299534c12614292ca70d3d218e1 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 3.2E-71 T 29-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CPU03_RS15940 f246350a3555aee5d594ad650986bae5 272 SUPERFAMILY SSF57938 180 217 4.97E-6 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CPU03_RS15940 f246350a3555aee5d594ad650986bae5 272 TIGRFAM TIGR02642 phage_xxxx: uncharacterized phage protein 1 268 7.8E-55 T 29-03-2018 IPR013464 Conserved hypothetical protein CHP02642 CPU03_RS15940 f246350a3555aee5d594ad650986bae5 272 Gene3D G3DSA:2.10.230.10 182 230 8.5E-4 T 29-03-2018 CPU03_RS11020 4954da2c198d6b5bf7aec851a3be332f 163 SUPERFAMILY SSF142433 3 159 1.57E-56 T 29-03-2018 IPR008136 CinA, C-terminal CPU03_RS11020 4954da2c198d6b5bf7aec851a3be332f 163 Pfam PF02464 Competence-damaged protein 6 157 2.6E-59 T 29-03-2018 IPR008136 CinA, C-terminal CPU03_RS11020 4954da2c198d6b5bf7aec851a3be332f 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 158 1.1E-55 T 29-03-2018 IPR008136 CinA, C-terminal CPU03_RS11020 4954da2c198d6b5bf7aec851a3be332f 163 Gene3D G3DSA:3.90.950.20 1 163 2.5E-60 T 29-03-2018 CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 SUPERFAMILY SSF53383 75 346 6.2E-47 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 243.586 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 1.7E-182 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 3.2E-168 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 Gene3D G3DSA:3.40.640.10 102 347 7.1E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CPU03_RS09975 388a7c01345ade3b66dc535f517e6097 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 7.0E-9 T 29-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 TIGRFAM TIGR01321 TrpR: trp operon repressor 14 103 4.5E-36 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 99 8.0E-31 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 Pfam PF01371 Trp repressor protein 17 102 3.2E-29 T 29-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 SUPERFAMILY SSF48295 13 103 1.26E-28 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 Gene3D G3DSA:1.10.1270.10 7 107 4.3E-21 T 29-03-2018 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 Hamap MF_00475 Trp operon repressor [trpR]. 14 107 24.421 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CPU03_RS05130 4f76a075c7c09a0c312c147c811c8e92 110 PIRSF PIRSF003196 4 108 5.3E-40 T 29-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CPU03_RS00355 64b9512e6085044c677443b7542ce112 73 Pfam PF07825 Excisionase-like protein 5 64 1.2E-7 T 29-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CPU03_RS00355 64b9512e6085044c677443b7542ce112 73 Gene3D G3DSA:1.10.1660.20 5 67 1.6E-13 T 29-03-2018 CPU03_RS00355 64b9512e6085044c677443b7542ce112 73 SUPERFAMILY SSF46955 4 58 2.01E-9 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS04930 1466d6a705ca4258f55be952bdf84e13 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 389 23.755 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CPU03_RS04930 1466d6a705ca4258f55be952bdf84e13 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 381 2.3E-177 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CPU03_RS04930 1466d6a705ca4258f55be952bdf84e13 392 Gene3D G3DSA:1.20.1530.10 3 386 3.7E-152 T 29-03-2018 IPR023171 Na/H antiporter domain CPU03_RS04930 1466d6a705ca4258f55be952bdf84e13 392 Pfam PF06965 Na+/H+ antiporter 1 7 381 2.2E-148 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CPU03_RS08240 fd8b3fb1c7b2e36c182909587a9cc565 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 3.4E-19 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CPU03_RS08240 fd8b3fb1c7b2e36c182909587a9cc565 137 SUPERFAMILY SSF49764 31 137 1.74E-19 T 29-03-2018 IPR008978 HSP20-like chaperone CPU03_RS08240 fd8b3fb1c7b2e36c182909587a9cc565 137 Gene3D G3DSA:2.60.40.790 6 137 7.9E-20 T 29-03-2018 IPR008978 HSP20-like chaperone CPU03_RS04345 4297e97906da0662e9136d9439940209 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.8E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CPU03_RS04345 4297e97906da0662e9136d9439940209 160 SUPERFAMILY SSF54523 9 90 1.65E-9 T 29-03-2018 CPU03_RS04345 4297e97906da0662e9136d9439940209 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.7E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site CPU03_RS03770 a39b5d5123760f2d6b665d23ef01d64e 104 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 2 79 9.3E-16 T 29-03-2018 IPR014299 Pentapeptide MXKDX repeat protein CPU03_RS00465 0c88eb657f191e69235fdf4e0f8b0322 321 Gene3D G3DSA:1.10.3720.10 4 303 4.5E-42 T 29-03-2018 CPU03_RS00465 0c88eb657f191e69235fdf4e0f8b0322 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 9.7E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00465 0c88eb657f191e69235fdf4e0f8b0322 321 SUPERFAMILY SSF161098 178 300 1.44E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00465 0c88eb657f191e69235fdf4e0f8b0322 321 SUPERFAMILY SSF161098 71 138 1.44E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS09270 03317f1aedd8cba0df4ec991687f6c34 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 2.9E-71 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CPU03_RS10280 3d822adb1b31b5ca268077bdfe1db2d6 249 Gene3D G3DSA:3.40.50.300 2 246 9.6E-53 T 29-03-2018 CPU03_RS10280 3d822adb1b31b5ca268077bdfe1db2d6 249 Pfam PF00005 ABC transporter 21 175 1.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CPU03_RS10280 3d822adb1b31b5ca268077bdfe1db2d6 249 SUPERFAMILY SSF52540 4 234 4.26E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS10280 3d822adb1b31b5ca268077bdfe1db2d6 249 SMART SM00382 30 224 1.3E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain CPU03_RS12440 dda4b51fd47477a4db075a284a0eea95 201 Pfam PF02669 K+-transporting ATPase, c chain 7 191 2.3E-68 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CPU03_RS12440 dda4b51fd47477a4db075a284a0eea95 201 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 6 192 6.6E-70 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CPU03_RS12440 dda4b51fd47477a4db075a284a0eea95 201 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 3 192 33.717 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CPU03_RS12440 dda4b51fd47477a4db075a284a0eea95 201 PIRSF PIRSF001296 2 196 3.8E-72 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.099 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.9E-24 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 Gene3D G3DSA:2.30.30.30 2 93 8.0E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 SMART SM00739 4 31 9.8E-4 T 29-03-2018 IPR005824 KOW CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 SUPERFAMILY SSF50104 4 101 1.03E-33 T 29-03-2018 IPR008991 Translation protein SH3-like domain CPU03_RS09435 88edeae6047a4ff12ef948af1e3caa6e 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.0E-40 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS15690 3158ec8daa84e05cca781d43f68859c5 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 71 7.1E-12 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CPU03_RS15690 3158ec8daa84e05cca781d43f68859c5 98 Gene3D G3DSA:3.30.70.100 1 97 2.4E-17 T 29-03-2018 CPU03_RS15690 3158ec8daa84e05cca781d43f68859c5 98 SUPERFAMILY SSF54909 1 95 4.54E-24 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS03065 82a47c1ff14006a6ed80bef0d9ccb12c 275 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 271 2.6E-98 T 29-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CPU03_RS03065 82a47c1ff14006a6ed80bef0d9ccb12c 275 Pfam PF08543 Phosphomethylpyrimidine kinase 21 269 1.2E-88 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CPU03_RS03065 82a47c1ff14006a6ed80bef0d9ccb12c 275 SUPERFAMILY SSF53613 14 275 4.21E-74 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS03065 82a47c1ff14006a6ed80bef0d9ccb12c 275 Gene3D G3DSA:3.40.1190.20 6 275 3.5E-55 T 29-03-2018 IPR029056 Ribokinase-like CPU03_RS04705 7838426f6f7961600b01857efde8e4ae 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 17.366 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CPU03_RS04705 7838426f6f7961600b01857efde8e4ae 106 Pfam PF04999 Cell division protein FtsL 10 104 2.9E-35 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CPU03_RS04705 7838426f6f7961600b01857efde8e4ae 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 103 4.7E-29 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 PRINTS PR01438 Universal stress protein signature 5 23 9.7E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 PRINTS PR01438 Universal stress protein signature 124 146 9.7E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 PRINTS PR01438 Universal stress protein signature 107 119 9.7E-12 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 Gene3D G3DSA:3.40.50.620 2 146 9.1E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 SUPERFAMILY SSF52402 5 146 9.21E-31 T 29-03-2018 CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 Pfam PF00582 Universal stress protein family 5 146 1.8E-28 T 29-03-2018 IPR006016 UspA GO:0006950 CPU03_RS02475 3635874d1ac52dcd81ad09859382ff79 146 PIRSF PIRSF006276 1 146 2.4E-18 T 29-03-2018 IPR006015 Universal stress protein A CPU03_RS13100 8fd03f53ced7ef39ef12b83a750657f9 90 Gene3D G3DSA:1.10.357.10 3 89 4.6E-4 T 29-03-2018 CPU03_RS13100 8fd03f53ced7ef39ef12b83a750657f9 90 Pfam PF08891 YfcL protein 4 87 7.7E-34 T 29-03-2018 IPR014987 Uncharacterised protein family YfcL CPU03_RS03685 fb727b10ee92d78dab8d04a71ac43fcf 338 Pfam PF03595 Voltage-dependent anion channel 26 325 5.6E-45 T 29-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CPU03_RS08320 07dc8351dd112c8990c851abfb918e78 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.4E-195 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CPU03_RS08320 07dc8351dd112c8990c851abfb918e78 404 Pfam PF03616 Sodium/glutamate symporter 2 366 2.5E-164 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CPU03_RS08320 07dc8351dd112c8990c851abfb918e78 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 25.026 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CPU03_RS07280 5b55cf1e11637a012839daead119c6dc 377 Pfam PF13265 Protein of unknown function (DUF4056) 45 309 1.5E-125 T 29-03-2018 IPR025130 Protein of unknown function DUF4056 CPU03_RS08920 4e93eeda4ba70725f85764574062de52 106 Pfam PF08850 Domain of unknown function (DUF1820) 6 98 2.9E-40 T 29-03-2018 IPR014949 Protein of unknown function DUF1820 CPU03_RS08920 4e93eeda4ba70725f85764574062de52 106 PIRSF PIRSF028538 1 105 1.7E-43 T 29-03-2018 IPR014949 Protein of unknown function DUF1820 CPU03_RS14110 c174841a6e3a30eb4ecd3e463d64e628 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 95.994 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CPU03_RS14110 c174841a6e3a30eb4ecd3e463d64e628 242 SUPERFAMILY SSF55729 2 228 1.8E-92 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS14110 c174841a6e3a30eb4ecd3e463d64e628 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 213 4.8E-76 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CPU03_RS14110 c174841a6e3a30eb4ecd3e463d64e628 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 7.3E-72 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 186 209 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 29 51 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 56 80 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 119 139 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 154 179 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 244 263 5.9E-79 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 Gene3D G3DSA:2.40.230.20 27 293 2.1E-67 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 33 293 2.3E-77 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CPU03_RS10635 86b97ca771737acf29e3916fcd5229e3 293 SUPERFAMILY SSF111364 33 293 7.19E-81 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CPU03_RS01300 48683a585104ca9e25f14ec83c46d8ae 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.105 T 29-03-2018 IPR027354 YcgL domain CPU03_RS01300 48683a585104ca9e25f14ec83c46d8ae 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 3.0E-32 T 29-03-2018 IPR027354 YcgL domain CPU03_RS01300 48683a585104ca9e25f14ec83c46d8ae 92 SUPERFAMILY SSF160191 1 87 5.36E-38 T 29-03-2018 CPU03_RS01300 48683a585104ca9e25f14ec83c46d8ae 92 Pfam PF05166 YcgL domain 3 75 2.3E-32 T 29-03-2018 IPR027354 YcgL domain CPU03_RS15080 59f1ebeea20f076a60421034854f9f5f 134 Gene3D G3DSA:2.60.120.380 23 133 4.3E-13 T 29-03-2018 CPU03_RS09560 db342e371a5439c61cf1b1aed104f4ba 156 Hamap MF_00598 Protein Smg [smg]. 1 156 31.351 T 29-03-2018 IPR007456 Smg CPU03_RS09560 db342e371a5439c61cf1b1aed104f4ba 156 Pfam PF04361 Protein of unknown function (DUF494) 1 156 6.8E-59 T 29-03-2018 IPR007456 Smg CPU03_RS00540 fdbffa4fd03cc6507ae81688dbbfc16b 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 250 8.6E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00540 fdbffa4fd03cc6507ae81688dbbfc16b 258 SUPERFAMILY SSF161098 3 255 9.03E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS00540 fdbffa4fd03cc6507ae81688dbbfc16b 258 Gene3D G3DSA:1.10.3720.10 5 258 2.5E-38 T 29-03-2018 CPU03_RS06775 01b62113a8428f6673545cbbfc953455 128 SUPERFAMILY SSF101756 26 127 5.1E-25 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS06775 01b62113a8428f6673545cbbfc953455 128 Pfam PF04076 Bacterial OB fold (BOF) protein 28 125 2.9E-20 T 29-03-2018 IPR005220 Bacterial OB-fold CPU03_RS06775 01b62113a8428f6673545cbbfc953455 128 Gene3D G3DSA:2.40.50.200 17 128 1.6E-23 T 29-03-2018 CPU03_RS04210 b54c70b36c54df3d8595f5436dac4b31 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 31.636 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CPU03_RS04210 b54c70b36c54df3d8595f5436dac4b31 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 5.0E-58 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CPU03_RS04210 b54c70b36c54df3d8595f5436dac4b31 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 6.0E-54 T 29-03-2018 IPR020911 Uncharacterised protein family UPF0325 CPU03_RS08160 d989b6466cafcaf7474f167909236bb2 445 PIRSF PIRSF005353 5 444 5.3E-175 T 29-03-2018 IPR026033 Purine permease PbuG-like CPU03_RS08160 d989b6466cafcaf7474f167909236bb2 445 Pfam PF00860 Permease family 31 404 5.0E-42 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 SUPERFAMILY SSF53720 2 480 6.02E-163 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 1.6E-217 T 29-03-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 Gene3D G3DSA:3.40.309.10 260 460 1.0E-72 T 29-03-2018 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 Gene3D G3DSA:3.40.605.10 1 259 9.1E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS15360 879d23d7c35cec108220755fcdc40fd9 488 Pfam PF00171 Aldehyde dehydrogenase family 17 474 9.9E-169 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CPU03_RS14655 9a26b9e7b3f67a8e3bfb151f810bf275 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 24 72 2.0E-4 T 29-03-2018 CPU03_RS14655 9a26b9e7b3f67a8e3bfb151f810bf275 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 1.4E-6 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CPU03_RS02410 3df50632e2ffb83a221362f94cc4ac6f 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 1.1E-161 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CPU03_RS02410 3df50632e2ffb83a221362f94cc4ac6f 293 Pfam PF00483 Nucleotidyl transferase 6 242 1.3E-71 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CPU03_RS02410 3df50632e2ffb83a221362f94cc4ac6f 293 SUPERFAMILY SSF53448 5 290 1.19E-95 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS02410 3df50632e2ffb83a221362f94cc4ac6f 293 Gene3D G3DSA:3.90.550.10 6 293 3.0E-73 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS07555 8e595b807f8592c9d22c1eb3aeca478b 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 7.3E-17 T 29-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 CPU03_RS04450 f50290acf9f68d3221c34e70354711c2 443 Gene3D G3DSA:3.20.20.370 185 433 3.3E-39 T 29-03-2018 CPU03_RS04450 f50290acf9f68d3221c34e70354711c2 443 Pfam PF01522 Polysaccharide deacetylase 239 378 3.4E-20 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CPU03_RS04450 f50290acf9f68d3221c34e70354711c2 443 SUPERFAMILY SSF88713 202 400 4.17E-32 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CPU03_RS17185 6882fbae22e7d0877971d1edaa394673 115 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 20 115 1.3E-31 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CPU03_RS17185 6882fbae22e7d0877971d1edaa394673 115 Pfam PF05513 TraA 1 113 2.2E-42 T 29-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CPU03_RS05345 7af04e55237695565007b7e0a2feac53 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 184 5.1E-58 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CPU03_RS05345 7af04e55237695565007b7e0a2feac53 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.741 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CPU03_RS05345 7af04e55237695565007b7e0a2feac53 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 1.5E-57 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CPU03_RS05345 7af04e55237695565007b7e0a2feac53 190 PIRSF PIRSF028513 1 187 3.8E-41 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CPU03_RS05345 7af04e55237695565007b7e0a2feac53 190 Gene3D G3DSA:2.60.450.10 88 187 6.4E-7 T 29-03-2018 CPU03_RS14765 c7c96bacae6b20e982fa57e108763cbd 350 Gene3D G3DSA:1.10.4080.10 16 347 9.9E-65 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CPU03_RS14765 c7c96bacae6b20e982fa57e108763cbd 350 Pfam PF03747 ADP-ribosylglycohydrolase 24 317 1.2E-56 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CPU03_RS14765 c7c96bacae6b20e982fa57e108763cbd 350 SUPERFAMILY SSF101478 20 343 1.44E-62 T 29-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CPU03_RS05395 6f6d551e38864e9f8b815e7e538856fb 128 Pfam PF07361 Cytochrome b562 24 128 5.7E-34 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CPU03_RS05395 6f6d551e38864e9f8b815e7e538856fb 128 SUPERFAMILY SSF47175 23 128 9.65E-33 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CPU03_RS05395 6f6d551e38864e9f8b815e7e538856fb 128 PIRSF PIRSF000029 1 128 1.3E-44 T 29-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CPU03_RS05395 6f6d551e38864e9f8b815e7e538856fb 128 Gene3D G3DSA:1.20.120.10 24 128 2.7E-18 T 29-03-2018 CPU03_RS09240 9edf86a45b97db462af41bf766ad8760 345 Hamap MF_02021 Cell division protein DamX [damX]. 3 345 24.529 T 29-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 CPU03_RS09240 9edf86a45b97db462af41bf766ad8760 345 Pfam PF05036 Sporulation related domain 262 335 1.7E-9 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS09240 9edf86a45b97db462af41bf766ad8760 345 Gene3D G3DSA:3.30.70.1070 264 329 0.0015 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 CPU03_RS14305 8b8b2300a63c7d069f356b2dc0406f2f 297 SUPERFAMILY SSF56112 19 268 1.35E-18 T 29-03-2018 IPR011009 Protein kinase-like domain CPU03_RS14305 8b8b2300a63c7d069f356b2dc0406f2f 297 Gene3D G3DSA:3.90.1200.10 2 287 1.9E-5 T 29-03-2018 CPU03_RS14305 8b8b2300a63c7d069f356b2dc0406f2f 297 Pfam PF01636 Phosphotransferase enzyme family 53 248 4.8E-7 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase CPU03_RS03240 3210bca149eee099459a3d7fd38befd3 117 SUPERFAMILY SSF75169 1 117 3.14E-32 T 29-03-2018 IPR027396 DsrEFH-like CPU03_RS03240 3210bca149eee099459a3d7fd38befd3 117 Gene3D G3DSA:3.40.1260.10 1 117 1.4E-28 T 29-03-2018 CPU03_RS03240 3210bca149eee099459a3d7fd38befd3 117 Pfam PF02635 DsrE/DsrF-like family 2 117 2.3E-21 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CPU03_RS12040 44dba9fdfbc1301cbf66c8ae0cbd362f 195 Gene3D G3DSA:2.60.40.1090 58 195 9.8E-17 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS12040 44dba9fdfbc1301cbf66c8ae0cbd362f 195 SUPERFAMILY SSF49401 48 195 3.83E-29 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS13045 fc79f93dbc2b96cf30894139c5e9b1ce 404 Gene3D G3DSA:1.25.40.10 153 294 5.3E-16 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS13045 fc79f93dbc2b96cf30894139c5e9b1ce 404 Pfam PF14559 Tetratricopeptide repeat 176 243 4.7E-9 T 29-03-2018 CPU03_RS13045 fc79f93dbc2b96cf30894139c5e9b1ce 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 114 1.5E-25 T 29-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI CPU03_RS13045 fc79f93dbc2b96cf30894139c5e9b1ce 404 SUPERFAMILY SSF48452 162 268 5.96E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS13095 f7345d30701cb57385830e9127d1c222 182 Pfam PF04315 Elongation factor P hydroxylase 13 172 2.5E-79 T 29-03-2018 IPR007411 Elongation factor P hydroxylase CPU03_RS02225 42eda962407a0c5464282db97b561856 232 Pfam PF13860 FlgD Ig-like domain 121 189 3.7E-24 T 29-03-2018 IPR025965 FlgD Ig-like domain CPU03_RS02225 42eda962407a0c5464282db97b561856 232 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 81 1.6E-21 T 29-03-2018 IPR005648 Flagellar hook capping protein CPU03_RS02225 42eda962407a0c5464282db97b561856 232 Gene3D G3DSA:2.60.40.10 127 211 5.7E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold CPU03_RS02225 42eda962407a0c5464282db97b561856 232 Pfam PF13861 FlgD Tudor-like domain 89 229 2.3E-17 T 29-03-2018 IPR025963 FlgD Tudor-like domain CPU03_RS10380 92a8810941c346f5c01d04639c244799 256 Pfam PF06912 Protein of unknown function (DUF1275) 18 237 1.8E-20 T 29-03-2018 IPR010699 Protein of unknown function DUF1275 CPU03_RS12950 a268bbe531870cb7ab7cd91081cecca2 198 Pfam PF07077 Protein of unknown function (DUF1345) 16 189 4.0E-54 T 29-03-2018 IPR009781 Protein of unknown function DUF1345 CPU03_RS00170 f46077810c9b32f5bdac050dda1a1295 127 Pfam PF14000 DNA packaging protein FI 7 121 4.6E-18 T 29-03-2018 IPR025147 DNA packaging protein FI CPU03_RS11740 e328b87de93da3ad28f1fd3bd2875abe 317 Pfam PF17188 MucB/RseB C-terminal domain 220 314 5.7E-28 T 29-03-2018 IPR033436 MucB/RseB, C-terminal CPU03_RS11740 e328b87de93da3ad28f1fd3bd2875abe 317 Gene3D G3DSA:2.50.20.10 31 239 3.9E-18 T 29-03-2018 CPU03_RS11740 e328b87de93da3ad28f1fd3bd2875abe 317 Pfam PF03888 MucB/RseB N-terminal domain 31 198 5.5E-61 T 29-03-2018 IPR033434 MucB/RseB, N-terminal CPU03_RS11740 e328b87de93da3ad28f1fd3bd2875abe 317 PIRSF PIRSF005427 1 317 5.9E-91 T 29-03-2018 IPR005588 MucB/RseB CPU03_RS02725 7379400803809f7620eec70cbe58ce70 299 SUPERFAMILY SSF54909 1 296 5.72E-87 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel CPU03_RS02725 7379400803809f7620eec70cbe58ce70 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 1.9E-82 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CPU03_RS02725 7379400803809f7620eec70cbe58ce70 299 Pfam PF04261 Dyp-type peroxidase family 5 295 7.7E-89 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CPU03_RS08310 04f59ba62341c9760917e6cf92ca8c32 556 Pfam PF05170 AsmA family 217 516 1.0E-11 T 29-03-2018 IPR007844 AsmA CPU03_RS05450 ad3708a83f9c5c00a10ae4aae9a7c174 148 SUPERFAMILY SSF55729 1 147 5.06E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS05450 ad3708a83f9c5c00a10ae4aae9a7c174 148 Pfam PF00583 Acetyltransferase (GNAT) family 36 121 1.3E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS05450 ad3708a83f9c5c00a10ae4aae9a7c174 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 1.7E-38 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CPU03_RS05450 ad3708a83f9c5c00a10ae4aae9a7c174 148 Gene3D G3DSA:3.40.630.30 3 148 1.7E-29 T 29-03-2018 CPU03_RS06865 6bd7ba980955dff520a78332b95de180 558 SUPERFAMILY SSF103473 33 500 3.92E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS06865 6bd7ba980955dff520a78332b95de180 558 Gene3D G3DSA:1.20.1250.20 35 258 1.5E-18 T 29-03-2018 CPU03_RS06865 6bd7ba980955dff520a78332b95de180 558 Pfam PF07690 Major Facilitator Superfamily 80 448 8.5E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS06865 6bd7ba980955dff520a78332b95de180 558 Gene3D G3DSA:1.20.1250.20 276 505 4.8E-22 T 29-03-2018 CPU03_RS15105 3a054a62c35eb47dfdd823d8628630a9 337 Gene3D G3DSA:2.70.98.10 21 336 3.0E-19 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CPU03_RS15105 3a054a62c35eb47dfdd823d8628630a9 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 334 6.0E-16 T 29-03-2018 IPR027839 Protein of unknown function DUF4432 CPU03_RS15105 3a054a62c35eb47dfdd823d8628630a9 337 SUPERFAMILY SSF74650 34 198 9.0E-7 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CPU03_RS10740 98a68614796c2858b31e17e7f807baed 477 Gene3D G3DSA:3.40.1350.10 310 461 7.6E-5 T 29-03-2018 CPU03_RS08570 db5d2afbdf9276b40dacb8aa6764453e 131 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 55 113 4.3E-11 T 29-03-2018 IPR009241 Toxin HigB-like CPU03_RS06615 6365f829c5ed7fbe3a725d093c72549f 184 Pfam PF02325 YGGT family 108 171 7.3E-19 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CPU03_RS06615 6365f829c5ed7fbe3a725d093c72549f 184 Pfam PF02325 YGGT family 10 76 6.9E-21 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 CPU03_RS13195 6191d57ed8cb0d898909da89d8786c6c 197 Pfam PF02441 Flavoprotein 2 165 4.5E-25 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS13195 6191d57ed8cb0d898909da89d8786c6c 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.443 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CPU03_RS13195 6191d57ed8cb0d898909da89d8786c6c 197 Gene3D G3DSA:3.40.50.1950 2 197 1.3E-55 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS13195 6191d57ed8cb0d898909da89d8786c6c 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 8.4E-69 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CPU03_RS13195 6191d57ed8cb0d898909da89d8786c6c 197 SUPERFAMILY SSF52507 2 188 2.09E-60 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CPU03_RS13715 385ab6bbf90bfdcf9a24ecbfb536e68e 198 SUPERFAMILY SSF54001 68 186 9.48E-40 T 29-03-2018 CPU03_RS13715 385ab6bbf90bfdcf9a24ecbfb536e68e 198 Gene3D G3DSA:3.90.1720.10 64 197 2.4E-38 T 29-03-2018 CPU03_RS13715 385ab6bbf90bfdcf9a24ecbfb536e68e 198 Pfam PF00877 NlpC/P60 family 80 184 3.0E-32 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CPU03_RS00645 fe401644e4b2c30b746dba19c8b53de9 60 Pfam PF10753 Toxin GhoT_OrtT 6 60 3.2E-25 T 29-03-2018 IPR019689 Toxin GhoT/OrtT CPU03_RS13590 7c078c31933663809beea25b20d6bb6a 296 SMART SM01131 178 295 1.5E-15 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CPU03_RS13590 7c078c31933663809beea25b20d6bb6a 296 SUPERFAMILY SSF64182 1 267 1.31E-48 T 29-03-2018 CPU03_RS13590 7c078c31933663809beea25b20d6bb6a 296 Pfam PF02833 DHHA2 domain 182 290 2.8E-10 T 29-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CPU03_RS13590 7c078c31933663809beea25b20d6bb6a 296 Gene3D G3DSA:3.90.1640.10 1 185 2.5E-42 T 29-03-2018 CPU03_RS13590 7c078c31933663809beea25b20d6bb6a 296 Pfam PF01368 DHH family 2 142 3.2E-14 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CPU03_RS14510 3427164d5feca94d61ef353b5dbf8903 214 Gene3D G3DSA:2.40.360.10 19 214 9.9E-61 T 29-03-2018 IPR023373 YmcC-like domain CPU03_RS14510 3427164d5feca94d61ef353b5dbf8903 214 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 15 209 8.2E-57 T 29-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB CPU03_RS14510 3427164d5feca94d61ef353b5dbf8903 214 SUPERFAMILY SSF159270 23 213 5.75E-53 T 29-03-2018 IPR023373 YmcC-like domain CPU03_RS15890 0062e78b035a2d941832ab90862f69d5 312 Gene3D G3DSA:1.10.10.10 13 88 1.1E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS15890 0062e78b035a2d941832ab90862f69d5 312 Pfam PF13730 Helix-turn-helix domain 19 67 5.5E-11 T 29-03-2018 CPU03_RS08650 3d53b7e57bd9f946623d5d208e6f120b 307 SUPERFAMILY SSF161098 100 287 3.79E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08650 3d53b7e57bd9f946623d5d208e6f120b 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 306 6.0E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS08650 3d53b7e57bd9f946623d5d208e6f120b 307 Gene3D G3DSA:1.10.3720.10 26 294 8.0E-46 T 29-03-2018 CPU03_RS08650 3d53b7e57bd9f946623d5d208e6f120b 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 4.2E-12 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CPU03_RS04945 a66a439a643125431b3fdd89556a6338 189 Pfam PF01184 GPR1/FUN34/yaaH family 3 176 2.9E-41 T 29-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CPU03_RS05630 9a264a29c73dea57e7ffca36fda9e037 111 Pfam PF10761 Protein of unknown function (DUF2590) 7 104 1.3E-42 T 29-03-2018 IPR019697 Bacteriophage HP1, Orf28 CPU03_RS02995 d4db88e49cc613ffe6bfa529ef9fb6bc 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 40.896 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CPU03_RS02995 d4db88e49cc613ffe6bfa529ef9fb6bc 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.4E-126 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CPU03_RS11015 5fe60193804549f0ff1cc2ddf4bc21ff 214 Pfam PF01914 MarC family integral membrane protein 8 204 3.7E-21 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CPU03_RS02145 440619a9b26fe7625566460ecf9fed6a 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CPU03_RS02145 440619a9b26fe7625566460ecf9fed6a 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 121 6.9E-11 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CPU03_RS02145 440619a9b26fe7625566460ecf9fed6a 127 SUPERFAMILY SSF54593 3 121 3.09E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS02145 440619a9b26fe7625566460ecf9fed6a 127 Gene3D G3DSA:3.10.180.10 7 127 2.1E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS12900 482fe910a2b5f27a897cb13fd579fb34 704 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 1.2E-34 T 29-03-2018 IPR025299 CstA, C-terminal domain CPU03_RS12900 482fe910a2b5f27a897cb13fd579fb34 704 Pfam PF02554 Carbon starvation protein CstA 32 400 6.0E-167 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 Gene3D G3DSA:3.30.470.10 1 111 1.8E-24 T 29-03-2018 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 Pfam PF01063 Amino-transferase class IV 24 246 1.4E-41 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 8.0E-104 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 SUPERFAMILY SSF56752 1 253 1.7E-62 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CPU03_RS14600 ad92448c1a4347970a750a090f75204b 270 Gene3D G3DSA:3.20.10.10 113 259 9.1E-32 T 29-03-2018 CPU03_RS00140 61491da7ce29147012a277c218a95dee 107 Pfam PF06223 Minor tail protein T 7 106 2.4E-23 T 29-03-2018 IPR009350 Minor tail T CPU03_RS00140 61491da7ce29147012a277c218a95dee 107 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 2 106 1.1E-26 T 29-03-2018 IPR009350 Minor tail T CPU03_RS14815 cbef912c64681c552ac1d297ecf26cb8 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 2.2E-37 T 29-03-2018 CPU03_RS14815 cbef912c64681c552ac1d297ecf26cb8 74 Gene3D G3DSA:1.10.287.310 13 74 4.4E-5 T 29-03-2018 CPU03_RS06105 1f9776c69d615f4c7fcb7aae0843cd54 103 SUPERFAMILY SSF141091 1 102 2.49E-37 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06105 1f9776c69d615f4c7fcb7aae0843cd54 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.014 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06105 1f9776c69d615f4c7fcb7aae0843cd54 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS06105 1f9776c69d615f4c7fcb7aae0843cd54 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-45 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS06105 1f9776c69d615f4c7fcb7aae0843cd54 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-38 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 Gene3D G3DSA:1.20.1250.20 255 461 7.9E-23 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 Gene3D G3DSA:1.20.1250.20 11 195 1.7E-27 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 SUPERFAMILY SSF103473 13 194 5.36E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 SUPERFAMILY SSF103473 244 451 5.36E-59 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 Pfam PF07690 Major Facilitator Superfamily 16 405 8.0E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.1E-8 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.1E-8 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.1E-8 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.1E-8 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.1E-8 T 29-03-2018 CPU03_RS07990 d25ce150f4513d942761c6fd6c60100e 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 420 1.0E-73 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CPU03_RS15640 fa5608dbaf3d5ab776fc259e068ee878 365 Pfam PF03773 Predicted permease 21 361 6.7E-53 T 29-03-2018 IPR005524 Predicted permease DUF318 CPU03_RS15905 b66de4e2386ea2ca19cf386fc3d1c967 214 Pfam PF07105 Protein of unknown function (DUF1367) 26 214 1.0E-52 T 29-03-2018 IPR009797 Protein of unknown function DUF1367 CPU03_RS02925 f1824eacc2c86ac12ebd9b5d785191a9 425 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS02925 f1824eacc2c86ac12ebd9b5d785191a9 425 Pfam PF00860 Permease family 16 383 2.6E-104 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS02925 f1824eacc2c86ac12ebd9b5d785191a9 425 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 2.4E-128 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CPU03_RS09890 04d3997eedd8ce72b275a5cedf6bbfd1 358 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 271 2.3E-115 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CPU03_RS09890 04d3997eedd8ce72b275a5cedf6bbfd1 358 Pfam PF04085 rod shape-determining protein MreC 123 269 2.3E-36 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CPU03_RS11695 b9fdcbe4e7a7188aa50183170f1bc22c 292 Gene3D G3DSA:2.60.200.30 142 264 6.0E-41 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CPU03_RS11695 b9fdcbe4e7a7188aa50183170f1bc22c 292 SUPERFAMILY SSF111331 7 289 7.85E-92 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CPU03_RS11695 b9fdcbe4e7a7188aa50183170f1bc22c 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 32.83 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CPU03_RS11695 b9fdcbe4e7a7188aa50183170f1bc22c 292 Pfam PF01513 ATP-NAD kinase 8 271 1.0E-74 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CPU03_RS11695 b9fdcbe4e7a7188aa50183170f1bc22c 292 Gene3D G3DSA:3.40.50.10330 1 141 2.2E-38 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CPU03_RS00445 51426a6a451cd5c343049ab41b2c4697 75 Pfam PF06667 Phage shock protein B 4 74 1.9E-32 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CPU03_RS00445 51426a6a451cd5c343049ab41b2c4697 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.5E-30 T 29-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CPU03_RS14070 e8530ab60a818bd607a24659a8b3e51f 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 284 9.0E-56 T 29-03-2018 IPR005642 Lysine exporter LysO CPU03_RS14070 e8530ab60a818bd607a24659a8b3e51f 299 Pfam PF03956 Lysine exporter LysO 113 297 4.4E-54 T 29-03-2018 IPR005642 Lysine exporter LysO CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 SUPERFAMILY SSF48576 4 280 3.29E-85 T 29-03-2018 IPR008949 Isoprenoid synthase domain CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 Gene3D G3DSA:1.10.600.10 1 267 4.4E-78 T 29-03-2018 IPR008949 Isoprenoid synthase domain CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 Gene3D G3DSA:1.10.600.10 268 301 0.005 T 29-03-2018 IPR008949 Isoprenoid synthase domain CPU03_RS03425 0c6915994108a5519e5e928d27f59258 301 Pfam PF00348 Polyprenyl synthetase 36 273 1.7E-55 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CPU03_RS04850 f6239f45efa5a6a1c56b89a4b0b18013 266 Pfam PF06738 Putative threonine/serine exporter 21 260 1.5E-65 T 29-03-2018 IPR010619 Putative threonine/serine exporter CPU03_RS01460 9fc26463bdd05e890098b71c6139c90f 131 SUPERFAMILY SSF161084 4 125 2.35E-29 T 29-03-2018 CPU03_RS01460 9fc26463bdd05e890098b71c6139c90f 131 Pfam PF01124 MAPEG family 3 120 5.1E-25 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CPU03_RS01460 9fc26463bdd05e890098b71c6139c90f 131 Gene3D G3DSA:1.20.120.550 1 124 2.3E-23 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CPU03_RS06440 e65809cf190c112f754a8cba01bb8078 157 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 4.6E-33 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 Pfam PF02107 Flagellar L-ring protein 43 227 5.9E-61 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 226 28.24 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 PRINTS PR01008 Flagellar L-ring protein signature 168 184 9.8E-35 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 PRINTS PR01008 Flagellar L-ring protein signature 142 157 9.8E-35 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 PRINTS PR01008 Flagellar L-ring protein signature 189 203 9.8E-35 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 PRINTS PR01008 Flagellar L-ring protein signature 205 219 9.8E-35 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS02205 5ed72ff62be0ec4d4252c247f9c089f7 228 PRINTS PR01008 Flagellar L-ring protein signature 69 81 9.8E-35 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 SUPERFAMILY SSF50249 3 68 2.06E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 PIRSF PIRSF002599 1 70 9.0E-13 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 SMART SM00357 6 71 2.5E-4 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 PRINTS PR00050 Cold shock protein signature 43 61 5.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 PRINTS PR00050 Cold shock protein signature 28 37 5.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 PRINTS PR00050 Cold shock protein signature 7 22 5.7E-5 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 Gene3D G3DSA:2.40.50.140 1 71 4.4E-15 T 29-03-2018 CPU03_RS01930 d9367d030bdd101eed5de553fbfca132 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 9.7E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CPU03_RS12835 c6a8f8ed7025d1afefba48d0a9b6b78b 193 Pfam PF01965 DJ-1/PfpI family 3 165 6.8E-31 T 29-03-2018 IPR002818 DJ-1/PfpI CPU03_RS12835 c6a8f8ed7025d1afefba48d0a9b6b78b 193 SUPERFAMILY SSF52317 3 184 1.31E-38 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS12835 c6a8f8ed7025d1afefba48d0a9b6b78b 193 Gene3D G3DSA:3.40.50.880 1 189 1.8E-36 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like CPU03_RS12580 817cd0f64945478eeb8a64997a6908ca 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 139 4.8E-23 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CPU03_RS12580 817cd0f64945478eeb8a64997a6908ca 140 TIGRFAM TIGR02801 tolR: protein TolR 11 138 6.0E-38 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CPU03_RS16905 69ad2c54c464bbf5d0aabcacdfc68ca9 209 Pfam PF11140 Protein of unknown function (DUF2913) 14 170 8.6E-24 T 29-03-2018 IPR021316 Protein of unknown function DUF2913 CPU03_RS02980 5492bb7f0fdd696f2843adc836d9c0d4 115 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 2.2E-23 T 29-03-2018 IPR010718 Protein of unknown function DUF1294 CPU03_RS02980 5492bb7f0fdd696f2843adc836d9c0d4 115 PIRSF PIRSF002599 22 115 4.5E-14 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 CPU03_RS10900 fae14bcc209d319743fa51cd837eee76 396 Pfam PF07690 Major Facilitator Superfamily 20 357 3.1E-21 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CPU03_RS10900 fae14bcc209d319743fa51cd837eee76 396 Gene3D G3DSA:1.20.1250.20 204 396 2.1E-7 T 29-03-2018 CPU03_RS10900 fae14bcc209d319743fa51cd837eee76 396 SUPERFAMILY SSF103473 18 395 1.57E-27 T 29-03-2018 IPR020846 Major facilitator superfamily domain CPU03_RS10900 fae14bcc209d319743fa51cd837eee76 396 Gene3D G3DSA:1.20.1250.20 14 195 7.9E-17 T 29-03-2018 CPU03_RS03960 b51a1da2d67607d52ade42ebb2660630 484 PIRSF PIRSF006060 2 479 3.2E-55 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03960 b51a1da2d67607d52ade42ebb2660630 484 Pfam PF13520 Amino acid permease 20 454 3.6E-59 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS03960 b51a1da2d67607d52ade42ebb2660630 484 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 15 473 8.1E-185 T 29-03-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter CPU03_RS17125 c3c19b64dfda828b9f08feff3b2185cf 190 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 72 185 2.4E-35 T 29-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CPU03_RS17125 c3c19b64dfda828b9f08feff3b2185cf 190 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 73 149 5.0E-21 T 29-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CPU03_RS00900 2acb496725fd556c6afa8fa688166e8b 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-22 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ CPU03_RS00900 2acb496725fd556c6afa8fa688166e8b 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 76 6.3E-42 T 29-03-2018 IPR020262 Uncharacterised protein family YecJ CPU03_RS00375 c4bb4723f90f2fa0ae1991ac1fcf2de3 183 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 181 1.5E-59 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS00375 c4bb4723f90f2fa0ae1991ac1fcf2de3 183 Gene3D G3DSA:3.40.50.300 2 182 8.3E-61 T 29-03-2018 CPU03_RS00375 c4bb4723f90f2fa0ae1991ac1fcf2de3 183 SUPERFAMILY SSF52540 3 182 1.61E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS00375 c4bb4723f90f2fa0ae1991ac1fcf2de3 183 PIRSF PIRSF006135 1 183 4.4E-56 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CPU03_RS10935 c4609da3b53a6ac78add7a2e86eb34f1 114 Pfam PF04977 Septum formation initiator 11 89 1.2E-31 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CPU03_RS10935 c4609da3b53a6ac78add7a2e86eb34f1 114 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.666 T 29-03-2018 IPR023081 Cell division protein FtsB CPU03_RS17165 b7cae17913d16147e3c50bd57509f596 466 Pfam PF03743 Bacterial conjugation TrbI-like protein 209 405 1.2E-29 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CPU03_RS17165 b7cae17913d16147e3c50bd57509f596 466 Gene3D G3DSA:1.20.5.340 67 426 4.5E-4 T 29-03-2018 CPU03_RS15230 b62187ddfc77f572d8c7279d13d22db5 130 Gene3D G3DSA:3.10.490.10 1 129 7.4E-25 T 29-03-2018 CPU03_RS10475 333e241f6be7acf94cf8bf678b544871 92 Gene3D G3DSA:3.30.370.10 1 89 1.4E-21 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CPU03_RS10475 333e241f6be7acf94cf8bf678b544871 92 SUPERFAMILY SSF52038 1 87 3.79E-26 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CPU03_RS10475 333e241f6be7acf94cf8bf678b544871 92 Pfam PF01337 Barstar (barnase inhibitor) 6 79 1.2E-10 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) CPU03_RS11510 470a41ae71d487f44bfe308fa3da110b 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.8E-114 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11510 470a41ae71d487f44bfe308fa3da110b 232 Gene3D G3DSA:3.40.50.1580 1 231 2.7E-52 T 29-03-2018 CPU03_RS11510 470a41ae71d487f44bfe308fa3da110b 232 SUPERFAMILY SSF53167 1 229 3.14E-71 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS11510 470a41ae71d487f44bfe308fa3da110b 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.434 T 29-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CPU03_RS11510 470a41ae71d487f44bfe308fa3da110b 232 Pfam PF01048 Phosphorylase superfamily 2 226 2.2E-44 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CPU03_RS08170 e14b97647c471dc0994859a3c08e0a3a 206 Pfam PF09335 SNARE associated Golgi protein 37 154 2.3E-19 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS14010 e74a22451b76c24f912b9727dcefb86f 509 Pfam PF11066 Protein of unknown function (DUF2867) 332 463 8.5E-16 T 29-03-2018 IPR021295 Protein of unknown function DUF2867 CPU03_RS14010 e74a22451b76c24f912b9727dcefb86f 509 Gene3D G3DSA:3.40.50.720 1 302 1.5E-27 T 29-03-2018 CPU03_RS14010 e74a22451b76c24f912b9727dcefb86f 509 Gene3D G3DSA:3.30.530.20 309 487 0.0016 T 29-03-2018 IPR023393 START-like domain CPU03_RS14010 e74a22451b76c24f912b9727dcefb86f 509 SUPERFAMILY SSF51735 1 294 6.21E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS14010 e74a22451b76c24f912b9727dcefb86f 509 Pfam PF13460 NAD(P)H-binding 10 149 2.2E-14 T 29-03-2018 IPR016040 NAD(P)-binding domain CPU03_RS08635 08cecd0d91f88781aa621cf8b65dc5b4 165 SUPERFAMILY SSF55826 5 153 2.22E-35 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS08635 08cecd0d91f88781aa621cf8b65dc5b4 165 Pfam PF04073 Aminoacyl-tRNA editing domain 25 149 2.4E-24 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS08635 08cecd0d91f88781aa621cf8b65dc5b4 165 Gene3D G3DSA:3.90.960.10 1 162 2.4E-38 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CPU03_RS16775 87ab0a5e6358b6bdf731a5f103f03cf0 67 Pfam PF10781 Dextransucrase DSRB 1 60 6.7E-36 T 29-03-2018 IPR019717 Dextransucrase DSRB CPU03_RS05310 733b63d681f13fbdda08ebea6f25d149 216 Pfam PF05494 MlaC protein 38 202 2.9E-51 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CPU03_RS05310 733b63d681f13fbdda08ebea6f25d149 216 Gene3D G3DSA:3.10.450.50 82 177 3.6E-18 T 29-03-2018 CPU03_RS05310 733b63d681f13fbdda08ebea6f25d149 216 Gene3D G3DSA:3.10.450.50 31 81 1.7E-5 T 29-03-2018 CPU03_RS05310 733b63d681f13fbdda08ebea6f25d149 216 PIRSF PIRSF004649 1 216 1.4E-57 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CPU03_RS11600 96e3d0db570173d283fabac40bc1b490 473 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 426 6.8E-72 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 CPU03_RS04105 b4e329e97ed2b79bd07bc61c8a98cd40 128 SUPERFAMILY SSF54593 3 127 1.07E-27 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS04105 b4e329e97ed2b79bd07bc61c8a98cd40 128 Gene3D G3DSA:3.10.180.10 1 128 2.9E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CPU03_RS04105 b4e329e97ed2b79bd07bc61c8a98cd40 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 7.2E-17 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CPU03_RS08200 943dc17e9e2f2af60c0fdd5093679162 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.0E-27 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS08200 943dc17e9e2f2af60c0fdd5093679162 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 8.0E-11 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS08200 943dc17e9e2f2af60c0fdd5093679162 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.276 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS08200 943dc17e9e2f2af60c0fdd5093679162 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CPU03_RS08200 943dc17e9e2f2af60c0fdd5093679162 46 Pfam PF00468 Ribosomal protein L34 1 44 6.9E-25 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CPU03_RS03115 07712ddda817c89faf429c4ed29fd952 160 Gene3D G3DSA:2.40.50.140 80 160 3.4E-14 T 29-03-2018 CPU03_RS03115 07712ddda817c89faf429c4ed29fd952 160 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 146 1.2E-25 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain CPU03_RS16045 97d15097a9538d01bb8fea9f0471c189 518 Pfam PF09327 Domain of unknown function (DUF1983) 220 287 9.2E-10 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 CPU03_RS16045 97d15097a9538d01bb8fea9f0471c189 518 Pfam PF12421 Fibronectin type III protein 349 427 2.4E-12 T 29-03-2018 IPR021034 Domain of unknown function, DUF3672 CPU03_RS12940 33b67fab2fa7cbf4381242fb50881935 224 Pfam PF11769 Protein of unknown function (DUF3313) 19 216 7.2E-47 T 29-03-2018 IPR021747 Protein of unknown function DUF3313 CPU03_RS13960 318ff320b4d423ebf94575d6c954d8dc 238 SUPERFAMILY SSF161098 7 216 6.93E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13960 318ff320b4d423ebf94575d6c954d8dc 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 9.3E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CPU03_RS13960 318ff320b4d423ebf94575d6c954d8dc 238 Gene3D G3DSA:1.10.3720.10 1 236 3.0E-37 T 29-03-2018 CPU03_RS03530 6af30e484129f1e16eac49de125755fb 66 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 5 64 6.0E-9 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 CPU03_RS03530 6af30e484129f1e16eac49de125755fb 66 Pfam PF11119 Protein of unknown function (DUF2633) 6 46 6.0E-24 T 29-03-2018 IPR022576 Protein of unknown function DUF2633 CPU03_RS09585 05f19fe1e5b39b499d3362f28cf3995e 185 Gene3D G3DSA:2.160.10.10 2 184 3.6E-41 T 29-03-2018 CPU03_RS09585 05f19fe1e5b39b499d3362f28cf3995e 185 SUPERFAMILY SSF51161 4 175 7.07E-46 T 29-03-2018 IPR011004 Trimeric LpxA-like CPU03_RS09585 05f19fe1e5b39b499d3362f28cf3995e 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 9.1E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS09585 05f19fe1e5b39b499d3362f28cf3995e 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 2.0E-7 T 29-03-2018 IPR001451 Hexapeptide repeat CPU03_RS16615 4eaba09755c16d9ac3b90780ccd8de3f 868 Pfam PF11739 Dicarboxylate transport 654 855 1.1E-59 T 29-03-2018 IPR021730 Dicarboxylate transport CPU03_RS06655 f62a9123c13056b6927370d64f0799d0 238 SUPERFAMILY SSF53335 16 236 2.05E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CPU03_RS06655 f62a9123c13056b6927370d64f0799d0 238 Pfam PF02390 Putative methyltransferase 62 232 1.4E-61 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CPU03_RS06655 f62a9123c13056b6927370d64f0799d0 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 237 30.828 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CPU03_RS06655 f62a9123c13056b6927370d64f0799d0 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 51 237 1.7E-69 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CPU03_RS06655 f62a9123c13056b6927370d64f0799d0 238 Gene3D G3DSA:3.40.50.150 29 238 9.1E-33 T 29-03-2018 CPU03_RS02635 2a8f8cda665db21ec9ca03157ca6e4b7 114 Pfam PF02316 Mu DNA-binding domain 10 74 4.2E-14 T 29-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CPU03_RS02635 2a8f8cda665db21ec9ca03157ca6e4b7 114 Gene3D G3DSA:1.10.10.10 3 69 7.3E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CPU03_RS02635 2a8f8cda665db21ec9ca03157ca6e4b7 114 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 22 113 0.001 T 29-03-2018 IPR010749 Protein of unknown function DUF1323 CPU03_RS02635 2a8f8cda665db21ec9ca03157ca6e4b7 114 SUPERFAMILY SSF46955 3 69 3.39E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain CPU03_RS15700 4400c681537dbb5913eebb3e686d4179 93 Pfam PF13467 Ribbon-helix-helix domain 17 83 9.0E-21 T 29-03-2018 IPR027373 Ribbon-helix-helix domain CPU03_RS15700 4400c681537dbb5913eebb3e686d4179 93 Gene3D G3DSA:1.10.3990.20 11 93 9.7E-25 T 29-03-2018 CPU03_RS01290 d1791d01215835ed009247fcf74c3f52 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.136 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CPU03_RS01290 d1791d01215835ed009247fcf74c3f52 153 PIRSF PIRSF006173 1 145 7.8E-66 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CPU03_RS01290 d1791d01215835ed009247fcf74c3f52 153 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.8E-7 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CPU03_RS14780 e0db76009dcc1d6a4d4f51bff0d6f85e 208 Gene3D G3DSA:1.10.3890.10 4 206 3.6E-77 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CPU03_RS14780 e0db76009dcc1d6a4d4f51bff0d6f85e 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 5.0E-70 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CPU03_RS14780 e0db76009dcc1d6a4d4f51bff0d6f85e 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 35.964 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CPU03_RS14780 e0db76009dcc1d6a4d4f51bff0d6f85e 208 SUPERFAMILY SSF101322 2 207 3.14E-79 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CPU03_RS14780 e0db76009dcc1d6a4d4f51bff0d6f85e 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 2.5E-75 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 CPU03_RS08855 53855888a3484ceb5f6d6f23803d65ab 498 Pfam PF01384 Phosphate transporter family 30 486 4.6E-89 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CPU03_RS05605 f953f3637ce7212acedcb13dd81351a9 148 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 7 148 1.4E-28 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CPU03_RS16945 de4947b0fa753728812e08ab5da4344e 143 Pfam PF00563 EAL domain 9 134 2.4E-22 T 29-03-2018 IPR001633 EAL domain CPU03_RS16945 de4947b0fa753728812e08ab5da4344e 143 Gene3D G3DSA:3.20.20.450 5 142 1.1E-25 T 29-03-2018 IPR001633 EAL domain CPU03_RS16945 de4947b0fa753728812e08ab5da4344e 143 SMART SM00052 3 143 3.0E-4 T 29-03-2018 IPR001633 EAL domain CPU03_RS16945 de4947b0fa753728812e08ab5da4344e 143 SUPERFAMILY SSF141868 9 135 1.57E-23 T 29-03-2018 IPR001633 EAL domain CPU03_RS01195 7826ea763ce5e747266ab865719401c1 223 SUPERFAMILY SSF49401 35 223 4.97E-16 T 29-03-2018 IPR008966 Adhesion domain CPU03_RS01195 7826ea763ce5e747266ab865719401c1 223 Gene3D G3DSA:2.60.40.1090 33 223 6.4E-22 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CPU03_RS01195 7826ea763ce5e747266ab865719401c1 223 Pfam PF16970 Type-1 fimbrial protein, A 77 223 2.4E-10 T 29-03-2018 CPU03_RS06580 667514fb59725533f64e5609024804b0 175 Hamap MF_00746 Protein SprT [sprT]. 16 169 38.056 T 29-03-2018 IPR023483 Uncharacterised protein family SprT CPU03_RS06580 667514fb59725533f64e5609024804b0 175 Pfam PF10263 SprT-like family 41 123 8.8E-15 T 29-03-2018 IPR006640 SprT-like CPU03_RS06580 667514fb59725533f64e5609024804b0 175 SMART SM00731 20 169 6.9E-47 T 29-03-2018 IPR006640 SprT-like CPU03_RS06580 667514fb59725533f64e5609024804b0 175 Gene3D G3DSA:3.30.40.10 16 174 1.2E-5 T 29-03-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type CPU03_RS13295 1094019e38e1411faeed025395f6e185 224 Pfam PF09335 SNARE associated Golgi protein 73 190 1.8E-29 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS15085 32e459e76ec26e8b8696e5f6dc8fd4df 312 Pfam PF14305 TupA-like ATPgrasp 50 300 4.4E-55 T 29-03-2018 IPR029465 TupA-like ATPgrasp protein CPU03_RS11145 5ef7c15530d306fc80ce84a0aa4b45fc 300 SMART SM00342 212 295 5.8E-6 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11145 5ef7c15530d306fc80ce84a0aa4b45fc 300 Pfam PF12833 Helix-turn-helix domain 218 296 7.7E-10 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CPU03_RS11145 5ef7c15530d306fc80ce84a0aa4b45fc 300 Gene3D G3DSA:1.10.10.60 185 243 0.042 T 29-03-2018 CPU03_RS11145 5ef7c15530d306fc80ce84a0aa4b45fc 300 Gene3D G3DSA:1.10.10.60 244 300 2.3E-6 T 29-03-2018 CPU03_RS16585 9466bc2225cb58401487c86fb0d91d34 412 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 304 320 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CPU03_RS16585 9466bc2225cb58401487c86fb0d91d34 412 SUPERFAMILY SSF53254 25 408 1.01E-75 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS16585 9466bc2225cb58401487c86fb0d91d34 412 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 30 44 - T 29-03-2018 IPR033379 Histidine acid phosphatase active site CPU03_RS16585 9466bc2225cb58401487c86fb0d91d34 412 Gene3D G3DSA:3.40.50.1240 14 412 1.4E-51 T 29-03-2018 IPR029033 Histidine phosphatase superfamily CPU03_RS16585 9466bc2225cb58401487c86fb0d91d34 412 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 30 362 2.6E-16 T 29-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CPU03_RS00575 3777971da4b278e6fa014447db3a4321 130 Pfam PF07233 Protein of unknown function (DUF1425) 36 129 7.0E-22 T 29-03-2018 IPR010824 Protein of unknown function DUF1425 CPU03_RS06465 b53fa7f4c623398349eeb568d5aa3aba 191 Gene3D G3DSA:1.10.10.60 1 50 2.6E-5 T 29-03-2018 CPU03_RS06465 b53fa7f4c623398349eeb568d5aa3aba 191 Gene3D G3DSA:1.10.357.10 51 180 1.6E-9 T 29-03-2018 CPU03_RS06465 b53fa7f4c623398349eeb568d5aa3aba 191 SUPERFAMILY SSF46689 3 66 7.7E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 CPU03_RS06465 b53fa7f4c623398349eeb568d5aa3aba 191 SUPERFAMILY SSF48498 78 179 6.52E-5 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CPU03_RS10455 3aea2b1e4a5c43a4a264245e8d44dfc6 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 8.2E-141 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CPU03_RS10455 3aea2b1e4a5c43a4a264245e8d44dfc6 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.2E-114 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CPU03_RS10455 3aea2b1e4a5c43a4a264245e8d44dfc6 433 PIRSF PIRSF006066 4 433 8.8E-164 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CPU03_RS07250 8f30c645686d1fd17168f58a9fd45159 175 Pfam PF09335 SNARE associated Golgi protein 40 156 1.6E-16 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS09785 9fa2c7c8a19e5af32cc73839bf16ddfa 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 5.5E-195 T 29-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CPU03_RS09785 9fa2c7c8a19e5af32cc73839bf16ddfa 548 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 3.5E-75 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CPU03_RS11225 27b5b35adc0416009bc0a6f2b4891ce4 261 SUPERFAMILY SSF56219 43 259 4.45E-24 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS11225 27b5b35adc0416009bc0a6f2b4891ce4 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 48 251 3.4E-8 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS11225 27b5b35adc0416009bc0a6f2b4891ce4 261 Gene3D G3DSA:3.60.10.10 30 259 5.9E-16 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CPU03_RS00015 088a04f88601b091efcbd5e44527eee6 102 Gene3D G3DSA:1.10.10.710 22 83 1.8E-24 T 29-03-2018 CPU03_RS00015 088a04f88601b091efcbd5e44527eee6 102 Pfam PF07130 YebG protein 1 74 6.5E-34 T 29-03-2018 IPR009813 Uncharacterised protein family YebG CPU03_RS05620 6f53e56a21b2a5acf41fd0ba7b2a7bc8 201 Pfam PF09684 Phage tail protein (Tail_P2_I) 35 131 2.5E-4 T 29-03-2018 IPR006521 Tail protein I CPU03_RS16550 5ff4ef7b9a8bdfbb864849d62bbfbb4f 463 Pfam PF13520 Amino acid permease 5 407 6.5E-70 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS16550 5ff4ef7b9a8bdfbb864849d62bbfbb4f 463 PIRSF PIRSF006060 1 462 4.8E-48 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS16550 5ff4ef7b9a8bdfbb864849d62bbfbb4f 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 461 3.9E-166 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CPU03_RS13185 695cbb653705eb7d323108233e4ef9a9 169 Pfam PF02674 Colicin V production protein 4 141 4.4E-38 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CPU03_RS07330 43edf04657c2d470d15652f0d7adab88 296 SUPERFAMILY SSF103481 46 145 8.76E-15 T 29-03-2018 CPU03_RS07330 43edf04657c2d470d15652f0d7adab88 296 TIGRFAM TIGR00688 rarD: protein RarD 8 260 8.6E-101 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CPU03_RS07330 43edf04657c2d470d15652f0d7adab88 296 SUPERFAMILY SSF103481 203 285 1.7E-8 T 29-03-2018 CPU03_RS07330 43edf04657c2d470d15652f0d7adab88 296 Pfam PF00892 EamA-like transporter family 9 142 1.2E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CPU03_RS15955 6745fb122f187dcf7a55cfc0110978d0 112 Pfam PF05106 Phage holin family (Lysis protein S) 2 103 3.4E-30 T 29-03-2018 IPR006481 Bacteriophage lambda, GpS, holin CPU03_RS15955 6745fb122f187dcf7a55cfc0110978d0 112 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 105 3.1E-26 T 29-03-2018 IPR006481 Bacteriophage lambda, GpS, holin CPU03_RS15510 c36243de334a59466b14c2c48d8a3985 339 Gene3D G3DSA:1.10.3470.10 2 335 4.7E-72 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CPU03_RS15510 c36243de334a59466b14c2c48d8a3985 339 Pfam PF01032 FecCD transport family 19 327 1.1E-84 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CPU03_RS15510 c36243de334a59466b14c2c48d8a3985 339 SUPERFAMILY SSF81345 4 328 2.22E-75 T 29-03-2018 IPR029022 ABC transporter, BtuC-like CPU03_RS03830 368984e9ff81f499768cad4662e0caae 135 Pfam PF06519 TolA C-terminal 51 133 2.2E-7 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CPU03_RS02755 115e8afc334bad0b4e3988e734bd91e3 272 PIRSF PIRSF020419 1 271 4.4E-67 T 29-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted CPU03_RS02755 115e8afc334bad0b4e3988e734bd91e3 272 SUPERFAMILY SSF159501 21 267 1.57E-46 T 29-03-2018 CPU03_RS02755 115e8afc334bad0b4e3988e734bd91e3 272 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 40 235 5.1E-25 T 29-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN CPU03_RS01485 2cd8bc76d40d672385df07a1bcbf0684 265 SUPERFAMILY SSF110395 3 242 2.75E-73 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CPU03_RS01485 2cd8bc76d40d672385df07a1bcbf0684 265 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 242 38.249 T 29-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CPU03_RS01485 2cd8bc76d40d672385df07a1bcbf0684 265 Gene3D G3DSA:3.20.20.380 1 255 8.0E-90 T 29-03-2018 CPU03_RS01485 2cd8bc76d40d672385df07a1bcbf0684 265 Pfam PF03932 CutC family 3 200 8.4E-73 T 29-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CPU03_RS09800 1de826fe4ab50a09bafda41deefa95ab 229 Pfam PF04172 LrgB-like family 14 224 5.6E-70 T 29-03-2018 IPR007300 CidB/LrgB family CPU03_RS00655 973688279195f6588952b1a90d7db308 121 Pfam PF05656 Protein of unknown function (DUF805) 11 117 1.6E-37 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CPU03_RS01530 60834176df8eaf710d94af23b032e74d 191 Gene3D G3DSA:1.10.3480.10 1 187 8.3E-29 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS01530 60834176df8eaf710d94af23b032e74d 191 SUPERFAMILY SSF89155 2 180 9.42E-37 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS01530 60834176df8eaf710d94af23b032e74d 191 Pfam PF02613 Nitrate reductase delta subunit 36 147 5.7E-7 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CPU03_RS01530 60834176df8eaf710d94af23b032e74d 191 PIRSF PIRSF004690 1 186 1.2E-51 T 29-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CPU03_RS14395 c7d2c98b626478699b35cbd2f4a427fd 159 Pfam PF03748 Flagellar basal body-associated protein FliL 57 157 1.6E-21 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Pfam PF13247 4Fe-4S dicluster domain 57 150 4.8E-24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Gene3D G3DSA:3.30.70.20 114 188 1.1E-15 T 29-03-2018 CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Gene3D G3DSA:3.30.70.20 77 113 2.4E-21 T 29-03-2018 CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Pfam PF12800 4Fe-4S binding domain 15 28 0.016 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Gene3D G3DSA:3.30.70.20 22 76 1.7E-15 T 29-03-2018 CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 SUPERFAMILY SSF54862 7 152 1.15E-58 T 29-03-2018 CPU03_RS00060 3a03f592dacd159f1ea85d083b7054b2 190 Gene3D G3DSA:3.30.70.20 2 21 0.0044 T 29-03-2018 CPU03_RS08975 a31728c660d71e36a52d048898cbb184 130 Hamap MF_02018 PanD maturation factor [panM]. 1 130 32.717 T 29-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 CPU03_RS08975 a31728c660d71e36a52d048898cbb184 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 1.5E-52 T 29-03-2018 IPR000182 GNAT domain GO:0008080 CPU03_RS08975 a31728c660d71e36a52d048898cbb184 130 Gene3D G3DSA:3.40.630.30 1 130 4.2E-13 T 29-03-2018 CPU03_RS08975 a31728c660d71e36a52d048898cbb184 130 SUPERFAMILY SSF55729 10 122 7.97E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase CPU03_RS15495 e6eefa333b9967de7ff698258061e30f 407 Pfam PF10129 OpgC protein 29 398 1.2E-59 T 29-03-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC CPU03_RS11620 40ef10c837feec6d7281666fca172292 183 Pfam PF10554 Ash protein family 22 131 7.5E-31 T 29-03-2018 IPR018880 Bacteriophage P4, Ash protein CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 495 2.4E-176 T 29-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 3.4E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 3.4E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 3.4E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 3.4E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 3.4E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS13360 bf7ae83bd441c38b22889e9dda655c6d 507 Pfam PF00361 Proton-conducting membrane transporter 134 431 1.2E-70 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS06315 c2110e37503fa401c0b683d490e640a2 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.4E-49 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CPU03_RS06315 c2110e37503fa401c0b683d490e640a2 154 Gene3D G3DSA:3.40.50.300 1 153 1.2E-50 T 29-03-2018 CPU03_RS06315 c2110e37503fa401c0b683d490e640a2 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 7.6E-40 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CPU03_RS06315 c2110e37503fa401c0b683d490e640a2 154 SUPERFAMILY SSF52540 27 139 8.67E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CPU03_RS05240 72492e8c89cd28c5996568a6381bf828 233 Pfam PF02600 Disulfide bond formation protein DsbB 24 208 2.3E-39 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CPU03_RS05240 72492e8c89cd28c5996568a6381bf828 233 Gene3D G3DSA:1.20.1550.10 14 225 1.8E-45 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CPU03_RS05240 72492e8c89cd28c5996568a6381bf828 233 SUPERFAMILY SSF158442 27 154 5.89E-29 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CPU03_RS05240 72492e8c89cd28c5996568a6381bf828 233 SUPERFAMILY SSF158442 184 209 5.89E-29 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CPU03_RS02245 70ce4ec1e9e14de02a14d36fb308a141 98 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.1E-17 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CPU03_RS02245 70ce4ec1e9e14de02a14d36fb308a141 98 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 89 3.1E-10 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CPU03_RS02245 70ce4ec1e9e14de02a14d36fb308a141 98 Gene3D G3DSA:1.10.287.1160 61 89 2.8E-10 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CPU03_RS02245 70ce4ec1e9e14de02a14d36fb308a141 98 SUPERFAMILY SSF101498 1 89 9.29E-13 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CPU03_RS05730 df9422bd2dff7dcebbfd871411a34813 96 Pfam PF17399 Domain of unknown function (DUF5405) 33 89 2.0E-6 T 29-03-2018 IPR035404 Domain of unknown function DUF5405 CPU03_RS00610 e6d6400132e840f1ae4dd0d39c566877 83 SUPERFAMILY SSF141099 1 82 3.27E-10 T 29-03-2018 IPR015073 Atu1913-like CPU03_RS00610 e6d6400132e840f1ae4dd0d39c566877 83 Gene3D G3DSA:4.10.1210.10 1 83 9.1E-17 T 29-03-2018 IPR015073 Atu1913-like CPU03_RS10650 6008ae6483a1460d3f813e5a22e757d5 88 Gene3D G3DSA:1.10.150.250 1 85 6.1E-26 T 29-03-2018 CPU03_RS10650 6008ae6483a1460d3f813e5a22e757d5 88 SUPERFAMILY SSF109910 1 78 1.01E-26 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CPU03_RS10650 6008ae6483a1460d3f813e5a22e757d5 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.3E-26 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase CPU03_RS11975 afb0f1ad812b694c062189ced20987de 112 Pfam PF01740 STAS domain 3 104 1.3E-12 T 29-03-2018 IPR002645 STAS domain CPU03_RS11975 afb0f1ad812b694c062189ced20987de 112 SUPERFAMILY SSF52091 1 108 6.28E-24 T 29-03-2018 IPR002645 STAS domain CPU03_RS11975 afb0f1ad812b694c062189ced20987de 112 Gene3D G3DSA:3.30.750.24 1 111 1.9E-18 T 29-03-2018 IPR002645 STAS domain CPU03_RS11975 afb0f1ad812b694c062189ced20987de 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 101 3.9E-17 T 29-03-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 CPU03_RS13280 2ccffc448566243753c939d32cfff1e1 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 128 2.9E-11 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CPU03_RS13280 2ccffc448566243753c939d32cfff1e1 194 Gene3D G3DSA:1.20.1290.10 17 185 9.2E-32 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS13280 2ccffc448566243753c939d32cfff1e1 194 SUPERFAMILY SSF69118 12 182 9.12E-44 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CPU03_RS05915 f9c4aace7cb6159e140c719eaae0aaf9 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 18 128 3.1E-20 T 29-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CPU03_RS07770 da9196dd78b3c749938658e6ee8139c3 131 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 2 112 1.0E-24 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CPU03_RS07770 da9196dd78b3c749938658e6ee8139c3 131 Pfam PF07226 Protein of unknown function (DUF1422) 4 113 5.3E-49 T 29-03-2018 IPR009867 Protein of unknown function DUF1422 CPU03_RS16355 097690e41dbce81fa649290b456e7daf 143 Pfam PF10754 Protein of unknown function (DUF2569) 4 141 2.1E-38 T 29-03-2018 IPR019690 Protein of unknown function DUF2569 CPU03_RS14230 897d87fbed22c45af3f7909a8cdfef29 586 Gene3D G3DSA:1.10.4050.10 413 548 0.0068 T 29-03-2018 CPU03_RS14230 897d87fbed22c45af3f7909a8cdfef29 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 2.8E-79 T 29-03-2018 IPR003776 YcaO-like domain CPU03_RS14230 897d87fbed22c45af3f7909a8cdfef29 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 1.1E-149 T 29-03-2018 IPR003776 YcaO-like domain CPU03_RS01705 16542f8a19dcedef76fa83f1dd6a1313 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 275 1.9E-55 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS01705 16542f8a19dcedef76fa83f1dd6a1313 280 SUPERFAMILY SSF56529 63 276 4.32E-68 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS01705 16542f8a19dcedef76fa83f1dd6a1313 280 Gene3D G3DSA:3.90.850.10 40 279 1.3E-65 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS07025 e9ebe3027f069858704eb11d4bc09098 221 Pfam PF07356 Protein of unknown function (DUF1481) 32 217 7.7E-57 T 29-03-2018 IPR010858 Protein of unknown function DUF1481 CPU03_RS12875 0c4195709c55422f7799c09011da792b 213 PIRSF PIRSF006324 5 213 4.0E-53 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS12875 0c4195709c55422f7799c09011da792b 213 Pfam PF01810 LysE type translocator 19 210 3.0E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS08775 00ec21c9ed1b0a25c170db930170bdc4 156 Pfam PF01230 HIT domain 10 78 2.2E-8 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS08775 00ec21c9ed1b0a25c170db930170bdc4 156 Gene3D G3DSA:3.30.428.10 1 155 2.3E-27 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS08775 00ec21c9ed1b0a25c170db930170bdc4 156 PRINTS PR00332 Histidine triad family signature 4 20 2.5E-7 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS08775 00ec21c9ed1b0a25c170db930170bdc4 156 PRINTS PR00332 Histidine triad family signature 25 43 2.5E-7 T 29-03-2018 IPR001310 Histidine triad (HIT) protein CPU03_RS08775 00ec21c9ed1b0a25c170db930170bdc4 156 SUPERFAMILY SSF54197 1 105 1.7E-27 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 CPU03_RS05725 ae5f3561ba6fa1265f37e27e33aaa7d3 683 Gene3D G3DSA:3.20.20.150 112 423 0.0077 T 29-03-2018 CPU03_RS05725 ae5f3561ba6fa1265f37e27e33aaa7d3 683 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 134 457 4.2E-104 T 29-03-2018 IPR008766 Replication gene A protein GO:0006260 CPU03_RS05095 8d3b30ad6ad94267e7a8f4d9a3b0a702 140 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 137 32.346 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CPU03_RS05095 8d3b30ad6ad94267e7a8f4d9a3b0a702 140 Pfam PF16358 RcsF lipoprotein 38 136 3.1E-39 T 29-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CPU03_RS03230 ce86d86ae24e68a2bd2da7c880061da7 52 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.4E-22 T 29-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related CPU03_RS09940 dbc52ee656e97594dab1a9bbde3a9441 644 Pfam PF04632 Fusaric acid resistance protein family 7 641 8.1E-116 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CPU03_RS17130 ae5c57c4cbc5fa9a2201989ef8cd1a68 336 Pfam PF06834 TraU protein 33 335 4.2E-115 T 29-03-2018 IPR009649 TraU CPU03_RS15630 19c689f3d0fea3882ec041363e4924dc 347 Pfam PF03773 Predicted permease 51 344 7.9E-77 T 29-03-2018 IPR005524 Predicted permease DUF318 CPU03_RS05900 24227db74d6d906fbd1786b309b01977 226 Pfam PF09335 SNARE associated Golgi protein 48 173 4.3E-22 T 29-03-2018 IPR032816 SNARE associated Golgi protein CPU03_RS10150 b1748b573661f606f369f9b05d15e90f 299 Gene3D G3DSA:3.20.20.70 14 268 8.1E-10 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CPU03_RS10150 b1748b573661f606f369f9b05d15e90f 299 SUPERFAMILY SSF51366 53 259 3.53E-6 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CPU03_RS01635 60c06eeed118641d0ffcb914723aa28d 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 6.0E-47 T 29-03-2018 IPR019698 Protein of unknown function DUF2583 CPU03_RS06200 b04a87c56d9e5573fd4473e91f635834 122 Pfam PF04343 Protein of unknown function, DUF488 8 114 8.0E-22 T 29-03-2018 IPR007438 Protein of unknown function DUF488 CPU03_RS15455 8a66521fce8aab5f1bad791043491ef7 308 Gene3D G3DSA:3.90.550.10 1 219 4.3E-28 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS15455 8a66521fce8aab5f1bad791043491ef7 308 Pfam PF00535 Glycosyl transferase family 2 4 166 1.2E-25 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CPU03_RS15455 8a66521fce8aab5f1bad791043491ef7 308 SUPERFAMILY SSF53448 1 249 6.75E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CPU03_RS10770 052c6bfe7edcb15a63a236359ac129c1 696 SMART SM00869 416 686 5.3E-32 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS10770 052c6bfe7edcb15a63a236359ac129c1 696 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 363 680 1.2E-15 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CPU03_RS10770 052c6bfe7edcb15a63a236359ac129c1 696 Gene3D G3DSA:2.40.128.130 363 696 1.5E-37 T 29-03-2018 CPU03_RS10770 052c6bfe7edcb15a63a236359ac129c1 696 SUPERFAMILY SSF103515 386 696 5.75E-39 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS10770 052c6bfe7edcb15a63a236359ac129c1 696 Pfam PF03797 Autotransporter beta-domain 419 675 2.2E-44 T 29-03-2018 IPR005546 Autotransporter beta-domain CPU03_RS04395 a6b8b7b689bfda2a2d70f9a2a149198f 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 56.258 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CPU03_RS04395 a6b8b7b689bfda2a2d70f9a2a149198f 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 3 223 1.2E-77 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CPU03_RS04395 a6b8b7b689bfda2a2d70f9a2a149198f 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.5E-75 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein CPU03_RS15770 726ee7bf1710e8973a6f3061c9934828 332 Gene3D G3DSA:3.30.870.10 24 168 1.2E-5 T 29-03-2018 CPU03_RS01895 6d29c7059d3dd8dfe0f2da23b798e398 331 Pfam PF14342 Domain of unknown function (DUF4396) 187 328 1.2E-39 T 29-03-2018 IPR025509 Domain of unknown function DUF4396 CPU03_RS00795 3ffae07709fb72ba52be2b135defb4ec 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 1.2E-74 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CPU03_RS00795 3ffae07709fb72ba52be2b135defb4ec 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 2.6E-123 T 29-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CPU03_RS04230 6aa813e928589be7b1a2fb149c184a94 184 Pfam PF07348 Syd protein (SUKH-2) 7 178 5.2E-61 T 29-03-2018 IPR009948 Syd GO:0009898 CPU03_RS04230 6aa813e928589be7b1a2fb149c184a94 184 Hamap MF_01104 Protein Syd [syd]. 3 180 33.096 T 29-03-2018 IPR009948 Syd GO:0009898 CPU03_RS15535 95cb2a93c4977c18cce60a68e44ded00 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 8.9E-21 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CPU03_RS10745 ad00c41475db69de44faa31bc5ba8570 200 ProDom PD095266 MEMBRANE YFGI EXPORTED 93 200 7.0E-6 T 29-03-2018 IPR020231 Uncharacterised protein family, YfgI CPU03_RS10745 ad00c41475db69de44faa31bc5ba8570 200 Pfam PF17358 Family of unknown function (DUF5384) 32 199 6.5E-6 T 29-03-2018 IPR020231 Uncharacterised protein family, YfgI CPU03_RS00820 1ca19a27d7a83d3f872e4824e52f725f 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 37 4.6E-22 T 29-03-2018 IPR019672 Protein of unknown function DUF2627 CPU03_RS11010 bcd709d83ae48196dde56c30d862b567 431 PIRSF PIRSF006060 1 423 8.1E-49 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS11010 bcd709d83ae48196dde56c30d862b567 431 Pfam PF13520 Amino acid permease 10 368 2.0E-30 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CPU03_RS15600 73977d52907955142b1fba34fb1e0658 186 Pfam PF13689 Domain of unknown function (DUF4154) 50 183 8.6E-28 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 CPU03_RS10855 9ab74c18c4d4a7dfcf6c497f34106393 274 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 58 166 3.8E-24 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10855 9ab74c18c4d4a7dfcf6c497f34106393 274 SUPERFAMILY SSF56770 46 181 1.15E-50 T 29-03-2018 CPU03_RS10855 9ab74c18c4d4a7dfcf6c497f34106393 274 Gene3D G3DSA:3.40.50.700 32 194 2.2E-29 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS10855 9ab74c18c4d4a7dfcf6c497f34106393 274 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 141 157 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CPU03_RS01045 c7228983a96097ca1c870d90f8217566 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 1.4E-76 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CPU03_RS01045 c7228983a96097ca1c870d90f8217566 214 Pfam PF01914 MarC family integral membrane protein 10 210 1.7E-70 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CPU03_RS13350 c07fe9a9b8049f2fd4eda5d6d090558b 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.573 T 29-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CPU03_RS13350 c07fe9a9b8049f2fd4eda5d6d090558b 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.6E-20 T 29-03-2018 CPU03_RS06780 bf0ddebc4fb173c4b15645c8d79e2e08 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 65 5.9E-16 T 29-03-2018 IPR014318 Phage shock protein, PspG CPU03_RS06780 bf0ddebc4fb173c4b15645c8d79e2e08 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 2.5E-17 T 29-03-2018 IPR014318 Phage shock protein, PspG CPU03_RS02885 34f469e57c03bbc7ba559073fc809bb4 346 PIRSF PIRSF026343 9 345 3.0E-111 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC CPU03_RS02885 34f469e57c03bbc7ba559073fc809bb4 346 Pfam PF06804 NlpB/DapX lipoprotein 41 343 1.3E-108 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein CPU03_RS02885 34f469e57c03bbc7ba559073fc809bb4 346 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 37.81 T 29-03-2018 IPR014524 Outer membrane protein assembly factor BamC CPU03_RS05970 219289f00c554bc2f2f6aaaabc6e3455 292 Pfam PF01136 Peptidase family U32 93 237 2.6E-14 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CPU03_RS03625 6550fdc3404ebbb74bc09bdee4e52db8 212 Pfam PF06912 Protein of unknown function (DUF1275) 8 200 5.8E-30 T 29-03-2018 IPR010699 Protein of unknown function DUF1275 CPU03_RS16840 c992ab84b8448e5516f191620f55d1d5 80 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 1.1E-39 T 29-03-2018 IPR025135 Protein of unknown function DUF4060 CPU03_RS03140 111efe91f516a765c2ad760b8d626215 447 PIRSF PIRSF002746 1 447 8.0E-145 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS03140 111efe91f516a765c2ad760b8d626215 447 Pfam PF02447 GntP family permease 5 446 1.5E-165 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS03140 111efe91f516a765c2ad760b8d626215 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 446 3.4E-179 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CPU03_RS01720 80789531f6331964860a119e7fdf8d67 425 Pfam PF03606 C4-dicarboxylate anaerobic carrier 66 421 1.9E-19 T 29-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CPU03_RS01720 80789531f6331964860a119e7fdf8d67 425 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 57 418 5.3E-59 T 29-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CPU03_RS08280 5ac763cf7f283ff8a1637bdc81df273f 174 Pfam PF01169 Uncharacterized protein family UPF0016 93 168 1.8E-19 T 29-03-2018 IPR001727 Gdt1 family CPU03_RS08280 5ac763cf7f283ff8a1637bdc81df273f 174 Pfam PF01169 Uncharacterized protein family UPF0016 2 73 7.1E-17 T 29-03-2018 IPR001727 Gdt1 family CPU03_RS00695 a098d57d003a0511e22b7f37abc1128e 109 Pfam PF11080 Endoribonuclease GhoS 1 92 1.6E-26 T 29-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 CPU03_RS00365 94758bc65c77d0031d698cabe12aade8 220 Pfam PF01235 Sodium:alanine symporter family 6 211 3.9E-56 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00365 94758bc65c77d0031d698cabe12aade8 220 PRINTS PR00175 Sodium/alanine symporter signature 67 85 1.1E-22 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00365 94758bc65c77d0031d698cabe12aade8 220 PRINTS PR00175 Sodium/alanine symporter signature 126 148 1.1E-22 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS00365 94758bc65c77d0031d698cabe12aade8 220 PRINTS PR00175 Sodium/alanine symporter signature 186 206 1.1E-22 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CPU03_RS11365 267af630eacc0fce66c5c6f8bec7c859 206 PIRSF PIRSF006170 1 206 2.6E-56 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 CPU03_RS11365 267af630eacc0fce66c5c6f8bec7c859 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.7E-56 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CPU03_RS11365 267af630eacc0fce66c5c6f8bec7c859 206 Gene3D G3DSA:1.25.40.10 85 204 3.1E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CPU03_RS05830 44deb62d768f26653516ebd10f53b369 167 Pfam PF01863 Protein of unknown function DUF45 32 149 1.8E-13 T 29-03-2018 IPR002725 Protein of unknown function DUF45 CPU03_RS17270 82ce9a2046e794e7f3e5ea3fe66710bb 142 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 44 142 1.0E-46 T 29-03-2018 IPR004914 Antirestriction protein CPU03_RS17270 82ce9a2046e794e7f3e5ea3fe66710bb 142 Pfam PF03230 Antirestriction protein 46 142 2.9E-29 T 29-03-2018 IPR004914 Antirestriction protein CPU03_RS06880 9550db671fddbe729cdadbc4c14a9b58 308 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 75 206 6.2E-51 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CPU03_RS09075 5c64731d86712be92e3bfb48a7a3c7e4 204 Pfam PF01810 LysE type translocator 16 185 7.6E-16 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CPU03_RS06515 9e533470e0d889a307ec1780c57ce6b5 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 1.3E-64 T 29-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CPU03_RS08915 07a5cf9c94e4da8b9d02a472170181d7 208 Pfam PF07947 YhhN family 26 206 2.2E-36 T 29-03-2018 IPR012506 YhhN-like GO:0016021 CPU03_RS01295 cfa33cfb39ed5d15eca42224b43458e5 218 SUPERFAMILY SSF56529 11 210 3.4E-68 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS01295 cfa33cfb39ed5d15eca42224b43458e5 218 Gene3D G3DSA:3.90.850.10 10 217 4.3E-71 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS01295 cfa33cfb39ed5d15eca42224b43458e5 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 201 2.1E-54 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CPU03_RS01730 0ad005a824cda00641a38449a582d9fb 101 Pfam PF07119 Protein of unknown function (DUF1375) 15 81 8.4E-17 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 CPU03_RS16085 2805169fd7b951cd68006bc1a265c577 154 Pfam PF05666 Fels-1 Prophage Protein-like 34 70 2.9E-13 T 29-03-2018 IPR008617 Uncharacterised protein family, YcgJ CPU03_RS16085 2805169fd7b951cd68006bc1a265c577 154 Pfam PF05666 Fels-1 Prophage Protein-like 78 128 1.4E-17 T 29-03-2018 IPR008617 Uncharacterised protein family, YcgJ CPU03_RS06270 ec48e5e398c8d65fccc3116ba44c318d 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 7.3E-22 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 CPU03_RS10055 35255d052bbbb3e0294fc086ea98a281 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.9E-77 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CPU03_RS10055 35255d052bbbb3e0294fc086ea98a281 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 2.1E-120 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CPU03_RS04595 cab7bf42eb596c6af49421893717c7fc 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CPU03_RS04595 cab7bf42eb596c6af49421893717c7fc 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 6.3E-23 T 29-03-2018 IPR018076 Type II secretion system F domain CPU03_RS04595 cab7bf42eb596c6af49421893717c7fc 399 Pfam PF00482 Type II secretion system (T2SS), protein F 63 186 1.6E-22 T 29-03-2018 IPR018076 Type II secretion system F domain CPU03_RS06565 53cce55cc46c6e90a692836acf966d34 386 SUPERFAMILY SSF52440 174 279 1.18E-41 T 29-03-2018 IPR016185 Pre-ATP-grasp domain CPU03_RS06565 53cce55cc46c6e90a692836acf966d34 386 SUPERFAMILY SSF56059 1 168 1.14E-93 T 29-03-2018 CPU03_RS06565 53cce55cc46c6e90a692836acf966d34 386 SUPERFAMILY SSF56059 266 383 1.14E-93 T 29-03-2018 CPU03_RS06565 53cce55cc46c6e90a692836acf966d34 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.0E-164 T 29-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CPU03_RS05530 f95c78d013cb59f55cccaeb065cc23d9 421 Pfam PF01384 Phosphate transporter family 26 409 4.4E-113 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CPU03_RS08930 e0bf110ee8dec6e8ececae3ec42ae3c3 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 57 1.0E-24 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 CPU03_RS09315 d958418d91ff03105a8bfaa6aa895fed 62 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 40 9.8E-15 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CPU03_RS09315 d958418d91ff03105a8bfaa6aa895fed 62 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 42 8.3E-18 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CPU03_RS09315 d958418d91ff03105a8bfaa6aa895fed 62 Gene3D G3DSA:2.20.25.10 1 42 6.9E-4 T 29-03-2018 CPU03_RS08925 af23b943a03a440cff95f85a976327a8 117 Pfam PF10694 Protein of unknown function (DUF2500) 5 113 3.6E-25 T 29-03-2018 IPR019635 Protein of unknown function DUF2500 CPU03_RS00090 0cc9c0f06cd4753c5af2c83721f7cbd1 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 43 175 8.1E-33 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CPU03_RS11815 910d6942c294d074f820d20e2637589c 73 Pfam PF04325 Protein of unknown function (DUF465) 19 66 7.7E-18 T 29-03-2018 IPR007420 Protein of unknown function DUF465 CPU03_RS14205 2f813d0c8abffde49cefd9227fa54d83 153 Pfam PF04224 Protein of unknown function, DUF417 11 142 5.9E-30 T 29-03-2018 IPR007339 Protein of unknown function DUF417 CPU03_RS14205 2f813d0c8abffde49cefd9227fa54d83 153 PIRSF PIRSF028065 2 146 2.9E-51 T 29-03-2018 IPR016865 Inner membrane protein RclC CPU03_RS08065 56811bb7dda3d830dadd12a241bff566 125 Pfam PF03899 ATP synthase I chain 14 109 2.1E-16 T 29-03-2018 IPR005598 ATP synthase protein I CPU03_RS10265 6760ffe1ef14269501e4cc2d22c28573 233 Gene3D G3DSA:3.90.1140.10 23 232 1.4E-19 T 29-03-2018 CPU03_RS10265 6760ffe1ef14269501e4cc2d22c28573 233 Pfam PF13563 2'-5' RNA ligase superfamily 62 192 3.4E-13 T 29-03-2018 CPU03_RS10265 6760ffe1ef14269501e4cc2d22c28573 233 SUPERFAMILY SSF55144 160 222 1.26E-13 T 29-03-2018 IPR009097 Cyclic phosphodiesterase CPU03_RS10265 6760ffe1ef14269501e4cc2d22c28573 233 SUPERFAMILY SSF55144 26 131 1.26E-13 T 29-03-2018 IPR009097 Cyclic phosphodiesterase CPU03_RS12460 c7165227cd4c6b68f77ad9a6b037e9ab 67 Pfam PF10725 Protein of unknown function (DUF2517) 3 62 1.6E-35 T 29-03-2018 IPR019663 Uncharacterised protein YbfA CPU03_RS05950 473898aaa0ee10f60df3e0ea8ba49eba 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CPU03_RS05950 473898aaa0ee10f60df3e0ea8ba49eba 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 489 5.6E-221 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CPU03_RS05950 473898aaa0ee10f60df3e0ea8ba49eba 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 1.1E-115 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS05950 473898aaa0ee10f60df3e0ea8ba49eba 494 Pfam PF00474 Sodium:solute symporter family 35 437 7.7E-132 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CPU03_RS02505 6aa2c931f6bc64f066a19e27943c5cde 351 Pfam PF13515 Fusaric acid resistance protein-like 33 158 2.9E-15 T 29-03-2018 CPU03_RS15970 2f7df344ee60914eb3a274493cae4bcd 180 Pfam PF10721 Protein of unknown function (DUF2514) 6 175 3.3E-31 T 29-03-2018 IPR019659 Protein of unknown function DUF2514 CPU03_RS00265 01ee6d39280fbc157c474120d4547df1 228 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 14 92 2.7E-19 T 29-03-2018 IPR014054 Bacteriophage regulatory protein, Rha family CPU03_RS15190 54f5d69b5b029eb274a1bb8079996f13 150 SUPERFAMILY SSF51182 49 147 2.41E-13 T 29-03-2018 IPR011051 RmlC-like cupin domain CPU03_RS15190 54f5d69b5b029eb274a1bb8079996f13 150 Pfam PF05899 Protein of unknown function (DUF861) 73 146 1.2E-11 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CPU03_RS15190 54f5d69b5b029eb274a1bb8079996f13 150 Gene3D G3DSA:2.60.120.10 29 147 7.4E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold CPU03_RS14630 cb8a4c47bb69bd19a3ad96e7a1a0f683 196 SUPERFAMILY SSF142695 3 173 4.05E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CPU03_RS14630 cb8a4c47bb69bd19a3ad96e7a1a0f683 196 Pfam PF00925 GTP cyclohydrolase II 5 170 6.3E-68 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CPU03_RS14630 cb8a4c47bb69bd19a3ad96e7a1a0f683 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.936 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CPU03_RS14630 cb8a4c47bb69bd19a3ad96e7a1a0f683 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 1.7E-92 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CPU03_RS10715 3070cb0ffab9880ae786972b69106492 155 PIRSF PIRSF032209 1 155 1.1E-66 T 29-03-2018 IPR016992 Uncharacterised conserved protein UCP032209 CPU03_RS10715 3070cb0ffab9880ae786972b69106492 155 Pfam PF07799 Protein of unknown function (DUF1643) 14 143 1.8E-37 T 29-03-2018 IPR012441 Protein of unknown function DUF1643 CPU03_RS15985 33094ce2f3c6c4bb0efad820d9481975 704 Gene3D G3DSA:1.20.1000.10 178 693 2.0E-6 T 29-03-2018 CPU03_RS05000 68d799bbae4f3f7caae8c7d52d106a6f 23 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 23 5.7E-7 T 29-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CPU03_RS07370 528995f6946379e1e19b1d57cefc93de 69 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 6.3E-8 T 29-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site CPU03_RS01230 be349f2d894f6bfdcabed1c7c8f6f1be 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 421 39.816 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CPU03_RS01230 be349f2d894f6bfdcabed1c7c8f6f1be 423 Pfam PF04285 Protein of unknown function (DUF444) 4 419 1.3E-180 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 CPU03_RS15485 2068045974dfaaa017f60c9e39f6ca36 451 Pfam PF11329 Protein of unknown function (DUF3131) 67 427 2.8E-66 T 29-03-2018 IPR021478 Protein of unknown function DUF3131 CPU03_RS00085 1b3fe53104e669221a7a4edb29a369cc 193 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 74 193 3.3E-26 T 29-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CPU03_RS00270 28eb7c6c4bab3bff1fdf95de1456e4c1 281 Pfam PF01925 Sulfite exporter TauE/SafE 12 262 1.6E-23 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CPU03_RS05625 30fb436e1e4b28b2ce91c94268948927 395 Pfam PF04865 Baseplate J-like protein 83 326 3.4E-32 T 29-03-2018 IPR006949 Baseplate protein J-like CPU03_RS12905 6938212368b37c13b1ede4a67ebe14c3 63 Gene3D G3DSA:3.30.160.160 9 52 1.0E-4 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 CPU03_RS03215 131966e8ddb1e98dfee001575c9ff86c 126 Pfam PF04304 Protein of unknown function (DUF454) 3 116 3.9E-37 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CPU03_RS03215 131966e8ddb1e98dfee001575c9ff86c 126 PIRSF PIRSF016789 2 123 4.9E-42 T 29-03-2018 IPR007401 Protein of unknown function DUF454 CPU03_RS12070 01b4e16e7dda7bbb675620b9f746dc1c 102 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 24 99 7.0E-22 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS12070 01b4e16e7dda7bbb675620b9f746dc1c 102 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 36 51 5.0E-8 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS12070 01b4e16e7dda7bbb675620b9f746dc1c 102 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 74 89 5.0E-8 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS12070 01b4e16e7dda7bbb675620b9f746dc1c 102 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 56 72 5.0E-8 T 29-03-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 CPU03_RS12750 4dff173199d07197369d21614fff38a2 323 Pfam PF01758 Sodium Bile acid symporter family 42 218 1.5E-13 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CPU03_RS06275 4d27bf08494469dd231ca20d64e81f9c 370 Pfam PF01757 Acyltransferase family 6 336 1.3E-16 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CPU03_RS04635 76dc5e950cfb9ef3ec3b232f77461a6e 181 Pfam PF05258 Protein of unknown function (DUF721) 23 90 6.0E-15 T 29-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CPU03_RS16685 d5f12dbdde4e26369ecc3818be3253c1 365 Pfam PF01594 AI-2E family transporter 18 343 9.7E-49 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like CPU03_RS07430 d5655376a9cff3797daa2c251adf5485 459 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 450 38.544 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CPU03_RS07430 d5655376a9cff3797daa2c251adf5485 459 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 443 5.1E-256 T 29-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CPU03_RS16920 166967aa447ff0e2c2fb2f2c77e133f2 304 Pfam PF07751 Abi-like protein 15 201 3.5E-8 T 29-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like CPU03_RS01915 68afc552c59f62764aca6a6ae14d5fd0 95 SUPERFAMILY SSF159871 3 94 3.14E-7 T 29-03-2018 IPR010854 Domain of unknown function DUF1471 CPU03_RS05910 bcda212be399f3f042b7821c191f9f0b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 9.8E-32 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CPU03_RS05910 bcda212be399f3f042b7821c191f9f0b 101 Gene3D G3DSA:1.20.5.1230 4 88 6.2E-5 T 29-03-2018 CPU03_RS16130 4a8e848bee6830f1a2a858cb73d0f3fe 879 Pfam PF02470 MlaD protein 283 351 1.0E-5 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS16130 4a8e848bee6830f1a2a858cb73d0f3fe 879 Pfam PF02470 MlaD protein 397 458 2.6E-8 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS16130 4a8e848bee6830f1a2a858cb73d0f3fe 879 Pfam PF02470 MlaD protein 49 140 5.0E-16 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS16130 4a8e848bee6830f1a2a858cb73d0f3fe 879 Pfam PF02470 MlaD protein 637 725 4.1E-9 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS16130 4a8e848bee6830f1a2a858cb73d0f3fe 879 Pfam PF02470 MlaD protein 747 808 1.2E-10 T 29-03-2018 IPR003399 Mce/MlaD CPU03_RS08745 d192ce54ca6e78ee6de34b71584a2ea7 195 Gene3D G3DSA:3.40.50.2300 1 194 4.5E-5 T 29-03-2018 CPU03_RS17095 57303a2eb959c7b7b8ece311d1cf211b 950 Pfam PF07916 TraG-like protein, N-terminal region 3 444 5.5E-115 T 29-03-2018 IPR012931 TraG-like, N-terminal CPU03_RS00345 9deeee747471a585d95433326247c9b9 67 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 3 65 8.3E-5 T 29-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CPU03_RS04335 c2f5eba45d9203a725179e0887f702b7 148 Pfam PF10713 Protein of unknown function (DUF2509) 11 128 2.2E-17 T 29-03-2018 IPR019652 Protein of unknown function DUF2509 CPU03_RS01220 38a92cd74156fb691a7e4bf99c6aaca7 247 Gene3D G3DSA:2.40.160.20 7 247 1.5E-12 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CPU03_RS01220 38a92cd74156fb691a7e4bf99c6aaca7 247 Pfam PF06629 MltA-interacting protein MipA 27 247 7.5E-53 T 29-03-2018 IPR010583 MltA-interacting MipA CPU03_RS05690 266570db099e0d96fe3706316cc27949 232 Pfam PF05944 Phage small terminase subunit 34 163 9.1E-39 T 29-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 CPU03_RS13935 92d04795ea8d59b46804884faa0c2871 159 Pfam PF10767 Protein of unknown function (DUF2593) 17 157 2.3E-50 T 29-03-2018 IPR019703 Protein of unknown function DUF2593 CPU03_RS06470 95b8b532c09c3f5ad39ed031697ed785 213 Pfam PF10938 YfdX protein 57 207 6.3E-47 T 29-03-2018 IPR021236 Uncharacterised protein family YfdX CPU03_RS13000 436bb7114cad951059153ebcb8384178 69 Pfam PF07869 Protein of unknown function (DUF1656) 6 61 1.8E-10 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 CPU03_RS07600 30bfcbf80b3dc65bee852b82615032f0 417 Pfam PF04932 O-Antigen ligase 199 351 5.3E-12 T 29-03-2018 IPR007016 O-antigen ligase-related CPU03_RS04445 3dbecc4f929aceb1d07b46bbe347f634 497 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 81 220 3.5E-13 T 29-03-2018 CPU03_RS15925 5a74a0f8619c71ba67e8afa9a738485f 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 103 7.3E-25 T 29-03-2018 IPR009241 Toxin HigB-like CPU03_RS15830 c7cac905e3becdcb4a47bc3977c7fee6 825 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 7 99 9.3E-13 T 29-03-2018 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 CPU03_RS00255 329622c819ad526efc9e55d6a2e7e4a8 347 Pfam PF06147 Protein of unknown function (DUF968) 136 342 4.9E-64 T 29-03-2018 IPR010373 Protein of unknown function DUF968 CPU03_RS00255 329622c819ad526efc9e55d6a2e7e4a8 347 Gene3D G3DSA:3.30.50.20 269 338 5.2E-17 T 29-03-2018 CPU03_RS15595 a0d01af5217b5bdf4b30f9c1fe1bf977 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 2 95 6.0E-38 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CPU03_RS15595 a0d01af5217b5bdf4b30f9c1fe1bf977 114 Pfam PF11756 Nitrous oxide-stimulated promoter 3 103 2.7E-39 T 29-03-2018 IPR020483 Uncharacterised protein family YgbA CPU03_RS10800 5e1e15e7c9b56543a5295095bf2db435 156 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 143 1.6E-62 T 29-03-2018 IPR021285 Transcription regulator, HycA CPU03_RS16980 e2e04fbd596c9da9e171a3f5a21f24d7 279 Pfam PF02432 Fimbrial, major and minor subunit 29 278 2.0E-13 T 29-03-2018 IPR003467 Fimbrial, major/minor subunit GO:0007155|GO:0009289 CPU03_RS07245 f138085648d5a49def3cf0612d84dff0 508 Pfam PF02646 RmuC family 136 432 3.4E-108 T 29-03-2018 IPR003798 DNA recombination RmuC CPU03_RS07245 f138085648d5a49def3cf0612d84dff0 508 Gene3D G3DSA:1.20.5.340 147 298 9.5E-21 T 29-03-2018 CPU03_RS02590 c6cfcb4d6ca5b19defff54f2773712b1 121 Pfam PF13984 MsyB protein 3 120 2.3E-52 T 29-03-2018 IPR025729 MsyB protein CPU03_RS13090 0e522b30e78e38d1c7373ebe435b0913 266 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 7.3E-41 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CPU03_RS15480 a3eae204c97824d3d6e33b8df5256f7a 524 Pfam PF11329 Protein of unknown function (DUF3131) 58 435 2.6E-141 T 29-03-2018 IPR021478 Protein of unknown function DUF3131 CPU03_RS17110 3342014f9bd46b52e5ed2d6192ae3e90 77 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 2 73 4.3E-23 T 29-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CPU03_RS08350 16435aa335dc807e00c0576a93ae39f0 206 Pfam PF03458 UPF0126 domain 5 77 3.8E-18 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CPU03_RS08350 16435aa335dc807e00c0576a93ae39f0 206 Pfam PF03458 UPF0126 domain 91 163 2.8E-21 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 CPU03_RS00835 c9fb87352e9037bfbc5624aca208b36d 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 4.6E-44 T 29-03-2018 IPR019633 Protein of unknown function DUF2498 CPU03_RS09780 9dc9ac962a5ef1a75c128d041f80da93 455 Pfam PF00860 Permease family 32 415 3.3E-79 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085