LT409_RS00015 NONE LT409_RS00020 4940 .. 4955 + -3.2 -3.4456 TATGGCTTCTAAAAC CCTTCA TACT TGATGG ATTTTGTTGGTATCC 49 86 gyrB 7316 .. 7329 + -9.5 -3.25823 GCGGCGAGGACGAGT CGCGC CCCG GCGCG TTCGTGTCCGAGGAG 61 344 gyrA 10000 .. 10040 + -19.7 -4.56597 GCCTCCAGCGTAACC TTGAACGCCCCGCCTCGCA TCC TGCGAAGCGGGGCGTTCTC TTTTTGGCGCGCCGC 100 47 LT409_RS00035 12376 .. 12392 + -5 -4.14243 GGTCGTGCGTCATCG GCCGCG AGAAC CGCGCC TTTTCCAGTGCGATG 64 386 LT409_RS00050 13840 .. 13881 + -13.9 -3.6053 CACCATTTTTTGCAA TAAACGCTCCACCG-TGAGC CGA GTTAGCCGGTGGAGCGTTTA TTAATTTCTAGACGC 88 36 LT409_RS00055 14027 .. 14054 + -17 -3.48036 CATACGTTATTCATC CGAACCCCCGCC GAGA GGCAGGGGTTCG TTGCTTCTGGTCGTG 100 39 LT409_RS00060 15023 .. 15035 + -9.1 -3.28712 TCGTCCCGATCGCCC GGCAG CGC CTGCC TTGTCGCCCGAAACG 63 74 typA 17017 .. 17036 + -10.7 -3.61398 ATCACTATGTAAGAA TGCGCCC TGATCT GGGCGCA TTCTTACAAGAGGGA 73 44 LT409_RS00070 18531 .. 18567 + -18.8 -3.55761 TGGTTCATCTGAGTT CGACACGGCGGGCGTCC TTCG GGAC-CCCGCCGTTTCG TTTCCAGCGTGGCTG 100 54 LT409_RS00075 NONE LT409_RS00080 19871 .. 19887 + -10.8 -3.73968 CCGCCAGATTACTCC CGCGCC CCCGA GGCGCG TTTCATACGGGGTTT 76 35 LT409_RS00085 20024 .. 20046 + -20.6 -5.45652 CCAGTAAACAGCAAA CCCTCCCGGC TCC GCCGGGAGGG TTTTTTCTTAAGCGT 100 38 LT409_RS00095 NONE LT409_RS00100 NONE LT409_RS00105 27088 .. 27100 + -4.9 -4.70266 ACCTCGAAAGATAAT TATTC AAT GAATA TTTTTGGATAATCTT 73 75 LT409_RS00110 27909 .. 27924 + -6.2 -3.96148 TTCCGTTCCGTCCGA TGTTTC ACGT GAAACA TTTGTGCTGGCGAGC 62 281 LT409_RS00115 29216 .. 29249 + -22.5 -4.07568 TGCGGCGAAAGCGCC GCCCGCTGCAGCTGC GCGT GCAGCTGCAGCGGGG TTTTCCACAACCCGC 100 311 rpsF NONE ssb NONE rpsR NONE rplI 31406 .. 31445 + -19.4 -3.51232 GGTCGCAGCCGTAGC GAGACCCCCTTCGCCC TTTACGGC GCGCGAAGGGGGTCTC TTCGTTTCGCAAGGA 100 84 dnaB NONE LT409_RS00145 NONE LT409_RS00150 36836 .. 36872 + -12.4 -3.59979 AGCCGCTATTGTCGC GCCCGTCGGGATGTTTC ACGT GAAACATCCCGG-GCGC TTTGGGATGCGGGGG 82 174 LT409_RS00160 38266 .. 38276 + -6.8 -3.86897 AAAATATACAAGCTT TCGG TTG CCGA TTTGTAAAGAATGAG 65 70 LT409_RS00165 NONE LT409_RS00170 NONE LT409_RS00175 NONE LT409_RS00180 43474 .. 43488 + -2.1 -4.08692 ATGCCCTGGGCGAGC CCGTGT CGAT AC-CGG TTTTCCGACCGCTTG 57 256 LT409_RS00185 45151 .. 45163 + -9.1 -2.60075 TCGCGTACCGAAGTA TCCCC TAC GGGGA CTTCCTTCGGGGCGC 56 123 purD NONE LT409_RS00195 48037 .. 48059 + -13.4 -4.84527 GCTCGAACACCGAAA CGCCCGCG CATCTGC CGCGGGCG TTTTTCGTGTGTGCC 100 57 LT409_RS00200 NONE LT409_RS00205 NONE LT409_RS00210 NONE LT409_RS00215 NONE tadA NONE LT409_RS00225 NONE LT409_RS00230 57932 .. 57969 + -7.8 -3.85817 ATTGTATGCTGCAAT GTAACCGTTCTGACAC CGTTTC GTGTCACAGCCGTTAC TTTATGCAGAAAAAT 69 22 LT409_RS00235 NONE LT409_RS00240 NONE pilM NONE LT409_RS00250 NONE LT409_RS00255 62036 .. 62052 + -9.3 -3.53444 TGTCCACCACCAGCA CGGCTCC GGC GGTGCCG TTTGACAGCAGCTCC 65 468 LT409_RS00265 65698 .. 65717 + -10.6 -3.42354 CGGGCGCGCAAAAAA GCGCCCCC GAAA GGGAGCGC TTCTGCATTCGAATG 70 187 LT409_RS00285 NONE purE 68273 .. 68308 + -19.8 -3.90291 CTCGAACGGTTGCAA C-GTGCGGCCGGATGCG ACC TGCATCCGGCCGCGCTG TTTCGTTAGAACGCT 100 52 LT409_RS00295 NONE LT409_RS00300 71203 .. 71238 + -21.2 -2.60941 TGGCGGTGCGTCCTT CGCGCCCCTCGCG-GAT GCG ACCGCGCGAGGGGCGCG CTTGTGCGCTATCAT 100 54 LT409_RS00305 73520 .. 73538 + -3 -3.55444 GGTCGGAAGGAGGCT GCCATGCG TAA CGTGTTGC TTTCGGGCGTGGGCG 47 15 LT409_RS00310 74128 .. 74146 + -11.6 -3.33696 GCGATAATCTTCGCG CCCCGCGC CCC GCGCGCGG TTAGTTGGGGAAGGC 72 34 LT409_RS00315 75354 .. 75406 + -33.2 -2.70932 GCCGATGTCGGAGCA TCATCGCCCCAAAAACACGCTTCA CGCGT TGAGGCGTGTTTTTGGGGCGATGA TGCTTCCCGGGGAAC 100 128 LT409_RS00320 76877 .. 76907 + -17.7 -4.56597 GCTTTCTCGTACGTG GAGGGAGGCA-CCC TGAC GGGCTGCCTCCCTC TTTTTGCGCGCGAAC 100 53 LT409_RS00325 79199 .. 79251 + -31.7 -3.12351 GGGACGGCAGAGGGC GCTTCGCTCCAAGAACACGCTTC AGCGAAC GAGGCGTGTTCTTGGAGCGAAGC TTGCATCTCGGAAGC 100 84 LT409_RS00330 81120 .. 81140 + -4.7 -4.08767 CGCGCTCGCGTGCTT CGTCGAT CGAAAAC ATCGGCG TTTTCGCCCCCTCGG 61 204 LT409_RS00335 83003 .. 83033 + -21.1 -5.00616 AGCGAAGCGCAGCGA GCGCCCGGGACGG CCACT CCGCCCCGGGCGC TTTTTTGCGCCCGGA 100 64 LT409_RS00340 85108 .. 85131 + -12.6 -3.22409 CGGCGCCAAGCGCTC CGAATGTTTC ACGT GAAACATTCG TTCGATTGCTGATTC 74 175 LT409_RS00355 89752 .. 89779 + -8.4 -3.54741 CATTATCGGCCCAAA GACACGGAATTC CCGC GAAAACCGTGTC TTTGGGCCGATAATG 62 85 LT409_RS00360 90366 .. 90393 + -14.8 -3.88062 TCTTCCGCGCGTTAC CGGGCTGTGACC GCGA GGCCGCAGCCCG TTTCGTATACTGTAT 93 56 nhaA 92099 .. 92111 + -5.5 -3.16267 AGAAGGGGCATTTCG GGGCA TCC TGCTC TTCGATATGCTTGCC 49 148 LT409_RS00375 93864 .. 93900 + -5.6 -3.13522 AGAGGTTGCGGACGG GGGTGCGCGATGAGGG CCGAT CCTGCGGCGAGCGCCC TGTTCCTGGGCGCGT 50 13 menD 95762 .. 95793 + -5.8 -3.61536 GGCGAATGCGGTAAG CGCCCGTTCG-ACGA CGG TGGTTCGAGCGGGGG TTTCGCGGTTCGGTT 57 88 LT409_RS00385 97315 .. 97354 + -8.4 -3.78934 AACCGCCGAAGCGAT CCGAGAGCCGTGGGGAGT ACAC GCTCCCTGCGGCTCGCCC TTATTATACAAAACG 67 374 LT409_RS00390 100396 .. 100407 + -3 -4.55798 GAAGCGTACCTGATC TTTC CGGA GAAA TTTTGCTTTGAGGTG 66 61 menB 101403 .. 101419 + -3 -2.52464 CCGAAAGGCAGGAAT CCGA-CA GCGA TGATCGG TGCGTTCGAGAGCAC 37 65 menC 104255 .. 104268 + -3.7 -2.75382 GTTGGAAAACGTCCT CGTGG AGCG CCTCG TCATTGCGTGACGTC 41 1 LT409_RS00405 106035 .. 106070 + -11 -3.48276 GGTTTGGGTTTACTT GGAGCGCTCCTTTCCC TTGT GGGACTGGAGCGCGTC TTCTATCACCAGGGC 74 151 LT409_RS00410 NONE LT409_RS00415 108553 .. 108577 + -9.9 -4.49756 GATGCTTCCCGACTA GGCTCCCGAAG CGA TTCCGGGGGCC TTTTGCTGTTTCCGG 89 127 LT409_RS00420 110041 .. 110062 + -13.7 -3.97307 GCTAAACGACTTCAG GCCCCGTCA GCAA TGGCGGGGC TTCTTGTTGCGTGCG 91 36 groL 112890 .. 112917 + -25.6 -2.90723 ACCCGGTTCTGCCAT GCGGGCCCGCGC AATC GCGCGGGCCCGC TGTCGTTCGACATGG 100 54 LT409_RS00440 NONE LT409_RS00445 115171 .. 115181 + -2.4 -3.33696 GGATGTCGAGCAGTC CGAG GCT CGCG TTGATTAAGAGGACG 44 7 LT409_RS00450 115509 .. 115528 + -13.6 -5.28176 GACCAATAATCGCAG GTCAGGGC TTCG GCCCTGAC TTTTTTGTCGGTCAA 100 36 LT409_RS00455 116422 .. 116435 + -2.3 -3.05384 GCCAGCAAAACACAG GAGAG TATG CTCGC TTCCCTCCGCAAACC 41 41 LT409_RS00460 116878 .. 116894 + -3.7 -4.47183 TGGCCGTTCGCTACT TAGAGGG CGA CTCTTTA TTTATTTACCTCGTG 68 99 LT409_RS00470 NONE LT409_RS00475 NONE nrfD 122713 .. 122733 + -7.5 -4.15453 GCAAGGTCTCGGATG CGAGCCTGA ACC TCTGGTTCG TTTTGCCGTGCGTTC 71 322 LT409_RS00485 NONE LT409_RS00490 123924 .. 123937 + -2.3 -2.84383 TGACCGCAGTAGAAG GGCGT GTGC AGGCC TCCGTTTATTTGTTG 40 38 LT409_RS00495 NONE LT409_RS00500 124829 .. 124845 + -4.3 -3.90424 GACGGAAGGGATTGG TGGCGGT TTC ATCGCCC TTCTCTCTTTTGTTT 59 78 LT409_RS00520 NONE LT409_RS00525 NONE LT409_RS00530 NONE LT409_RS00535 131513 .. 131528 + -3.2 -4.14392 CAATGTAAAGGAGCT TACGCT CCGC AGCGAA TTTTACCACTTGAAA 62 144 LT409_RS00540 NONE LT409_RS00545 NONE LT409_RS00550 NONE LT409_RS00555 NONE LT409_RS00560 NONE LT409_RS00565 NONE LT409_RS00570 NONE LT409_RS00575 NONE LT409_RS00580 142774 .. 142801 + -18.5 -3.40522 TTCATCAACTAAATG CAGCGGCTGGG TTCATC CCCAGCCGCTG TTGTCATAAAAAGCT 95 145 LT409_RS00590 144443 .. 144463 + -5.3 -3.71998 TACAGGCAGCAAAGT GTCTTGCCG CCC CGGCGGTAC TTGTATTCGTACGTC 58 483 LT409_RS00625 NONE LT409_RS00630 150295 .. 150316 + -3.5 -3.17075 GGGAGGTCGGCTAGG CGCGGACGC GACT GCGGCTGCA TTAGCTTGGGCGGGG 45 27 LT409_RS00635 150732 .. 150759 + -8.5 -3.35073 TTTAAGCGCTTCTCT CGAACGAGCAA CCGTCC TTGGTCGTTCG TTCGTTGAAAGTGGT 59 60 LT409_RS00640 NONE LT409_RS00645 NONE LT409_RS00650 NONE LT409_RS00655 NONE LT409_RS00660 156528 .. 156542 + -7 -2.70932 CTGCTGCGACGGTTC CCGGCG GGT CGCCAG TGCTTGCGAGCGGGG 50 141 LT409_RS00665 157698 .. 157733 + -16.2 -2.8806 CGAGCTTCCATTCTT CCGTGAAGGCCGTCGA TCCC TCGACGGCCTTCACCA TATCTCACCAGATTT 81 44 LT409_RS00690 NONE LT409_RS00695 NONE LT409_RS00700 NONE LT409_RS00705 166023 .. 166036 + -8.1 -4.55287 GTTCGCTTGGTAAAA GACCC CGGG GGGTC TTTTCTGTCAGTGCG 79 94 LT409_RS00710 166672 .. 166684 + -6.2 -4.38092 GGAGTAGCAAGGGTC GCGG CGGTT CCGC TTGTTTTCGTTCTTC 71 34 LT409_RS00725 NONE LT409_RS00730 172750 .. 172779 + -22.2 -4.55023 CAAGAACGCAACGAA GCCCCGGCTCGC CGTAAA GCGAGCCGGGGC TTTTATCGTGTTACA 100 56 LT409_RS00750 177963 .. 177976 + -2.3 -3.61232 CGCAGAGTGGAACTC CGTCG AGCG CGACA TGTTTCTGTAAACGC 49 1 LT409_RS00755 178850 .. 178867 + -14.1 -3.40403 TGCCGGAAAAGAGAA CGCCCCG GATT CGGGGCG TTCTCGTAGGGGGCG 81 197 LT409_RS00765 182204 .. 182217 + -4.5 -3.53811 GCGTAGGCGTGATCG CTGGA CATG TCCGG TTTCGGCCCGCTGAA 52 35 LT409_RS00770 NONE LT409_RS00775 NONE LT409_RS00780 NONE nrfD 186689 .. 186724 + -16.8 -3.55444 TCGCCCAGCCTGATG TTC-CGCGCGCCGCTCC TCC GGGGCGGCGCGCGTGCG TTTGCGGGCTGCCGA 100 47 LT409_RS00790 NONE LT409_RS00795 188786 .. 188807 + -18.7 -5.37593 GTCTCCGAGCTATCG CGCCCCCGC CCAT GCGGGGGCG TTTTTTCGTTTACAG 100 50 LT409_RS00805 191924 .. 191950 + -20.2 -3.05384 CGGTATTCCTTTCGA TGAGGCCGGGGA GCA TCCCCGGCCTCG TTGCGTCGGGGGGGG 95 292 LT409_RS00810 193022 .. 193034 + -3.3 -4.15222 TGGGCTAGAGGCGCG GTGCA GGA TGCTC TTTCTTGGAGACGCT 62 33 LT409_RS00815 194687 .. 194699 + -4.7 -3.86194 CCGACGCGCTTGCCA CGCGG ATT CCACG TTTCTCGCCGGCGTT 59 416 LT409_RS00845 NONE rlmD NONE LT409_RS00855 NONE tilS 205845 .. 205860 + -4.6 -4.04927 ATGGTGCGCAGGGCT CGATGG CCGG CCAGCG TTGTTTCCTGATTGA 62 381 LT409_RS00875 207506 .. 207526 + -10.3 -2.91582 GCGAACGACTCGACG CTGGGCGGC TGC GCCGCCCGA TCTCTCAGTCGAGTC 62 47 hpt 208380 .. 208390 + -5.4 -3.04144 AAGCCGGAGATTTAC TAGC GAA GCTA TCTTGGCGGTCGACC 49 23 ftsH NONE folP 212089 .. 212110 + -2.9 -4.18018 GCGTGCGGCTGTGAG CAAGGGGCGC TCT GTGCC-CTCG TTTTGCGTCGACGGC 60 27 LT409_RS00895 213160 .. 213192 + -3.3 -3.35798 TCTCTTTGAATCTCC TGCTTGACCCTCGAC ATG GTTCAGGGTCTACCG TTGTCCCTGCGCCCT 47 70 LT409_RS00900 NONE LT409_RS00905 215368 .. 215398 + -14.7 -4.00526 TTTCCCTCCCTTGAA GGGCTTCGTCGCG TTCGC TGCGCCGAAGCCC TTTCCTTATGCACTT 95 52 LT409_RS00915 217923 .. 217947 + -13.6 -4.02108 TCACCCTTGCTTAAA CCCCGCGGTT CACAA AACTGCGGGG TTTGCTTATAGTGCG 95 67 LT409_RS00920 218618 .. 218647 + -23.7 -3.79747 ACATCGATCACCAAA CGAAACGGGCGCC TTCG GGCGCCCGTTTCG TTTGGTGATCGATGG 100 44 LT409_RS00935 222573 .. 222624 + -3 -2.59564 AAAGAGAGGGGAACC CTCTGGCGCCCTAACGATG-GCA CGGATTT TGCATATCGCTATGGCGTTGGGG ATTCTCAGGTAAAAC 38 99 LT409_RS00940 223953 .. 223976 + -21 -3.17075 AACGCGAATCGCACA GCGGGCCGCC CTCG GGCGGCCCGC TTGCGTTGCGGGGGC 100 52 LT409_RS00950 226374 .. 226415 + -9.3 -4.07568 TAAACGAGGAACGGG ACAAAGGGACGGGGATCGA TGTC TTGTCCCCCGTCCCTTCGC TTTTCCGAGCGGCCG 76 38 LT409_RS00955 NONE LT409_RS00960 NONE LT409_RS00965 NONE LT409_RS00970 NONE LT409_RS00975 NONE LT409_RS00980 236018 .. 236041 + -4.6 -3.93583 GTTGATGGATCGCAC G-TCATGAAGG GGT CCTTCCTGAGC TTTCTCCATAGATTA 60 500 rpoN NONE LT409_RS00995 239729 .. 239786 + -9.9 -3.16039 CGCTTGGGCAGGCTG GCACGCTTTTTGCTTTTCGAAGGTGCG GAAC CGCATTCCCGAGAAGCAAAAGGAGTGA TTCATGAACATCGTT 65 65 fixA NONE LT409_RS01005 241821 .. 241831 + -6.8 -3.35798 CTTCGAGGAATGAAG CGAG ATC CTCG TTCTGCATGAGCGAT 55 361 LT409_RS01025 243521 .. 243548 + -17.1 -3.81137 GCGCTCGCTATCAAA TCCGGGATCGC GATCGG GCGATCCCGGA TTTGCGTGTTTGAGG 100 72 LT409_RS01040 246337 .. 246360 + -9.5 -3.37761 CGACGGAGCTTCATG CGTCGCGGC CTATTT GCCGCAACG TTGGCTTTCTTGCGC 63 165 LT409_RS01045 248157 .. 248194 + -30.1 -2.87468 GCCTGTTCTAAGCTT GGAGCGCCCCCGATTTC GGTT GAAATCGGGGGCGCTCC TGTCGTATGCTACGC 100 30 LT409_RS01050 249086 .. 249135 + -22.3 -3.484 GTCCAAGCGGTGGTT GCCGACCGAAGCGTGCGGATTATC TCA GG-ATTCCGCGCGTTTCGGTCGGC TTGTCGTATCATGCA 100 55 LT409_RS01055 NONE LT409_RS01060 250777 .. 250792 + -3.2 -4.25104 GCATCGGCTGTAAGA CGTGCA TGGC TGCGTG TTTTCATCGCCACGA 62 99 LT409_RS01065 NONE fdhF NONE LT409_RS01075 NONE LT409_RS01080 255412 .. 255431 + -10.7 -3.05384 CGCACGCCGAACTCG CCGGGCA GGTAGA TGCCCGG TTCGATGGAGAACAC 63 514 tsaE NONE tsaD 260087 .. 260113 + -11.4 -3.26471 CCTTGATCGCGTAGC GCCCCACCTCGC GCG GGGGGGGGGGGC TTCCTCTGAGCCTCG 69 420 LT409_RS01100 NONE LT409_RS01105 NONE LT409_RS01110 265542 .. 265577 + -11.8 -3.28712 GGGGGCGGGCTCGAT GGACGACGA-CGGGCGC TGA GCGCCCGCTTGAGGTCC TTCTCGCGCGAGAGC 72 7 LT409_RS01115 NONE LT409_RS01120 266878 .. 266914 + -2.7 -4.64334 AGCCCAGATGGGAAC CGAGATCACGGCATCGT AGG GCGCTCCCGGGAGCCCG TTTTCTTCCCACGTT 68 7 kdpA 269526 .. 269562 + -3.1 -2.71144 CGCCGGGCGCAAGGC GTCGATGA--GCGCGTT GGCCA AGCGCGCCGTGATCGAC TCGTTCGCGAAGCTC 41 119 kdpB NONE kdpC 272222 .. 272235 + -3.7 -2.78384 GAAAGTGAACCTGAT GCTCG ACGG CGTGC TATGATGGCGGCACC 41 7 LT409_RS01140 NONE LT409_RS01145 276096 .. 276115 + -4.2 -3.5362 TGAGAACCGGTTCCG CCCCAGAG TAGA CTTTGGTG TATTTGTACAGGTTC 51 369 LT409_RS01155 NONE LT409_RS01160 278952 .. 278967 + -9 -3.16668 CGAGCGCGACAACAA GGCTTG CTTT CAAGCC TTGGTCAGGATCTTC 57 245 LT409_RS01180 282722 .. 282734 + -3.3 -3.79678 CGGGAATGCTATCAT ACGCA TCA TGCGA TTATTCTAAGAGATT 54 123 LT409_RS01185 NONE LT409_RS01190 284333 .. 284379 + -18.2 -3.63627 CTAGCTTCCGCCCGA TGACGAAGGGCGTTCGC-AGCG TCTCC CGCTTGCGGACGCCCTTCG-CG TTTCCCGTGTGAGAA 100 37 LT409_RS01195 NONE tatC 286110 .. 286131 + -17.3 -5.2197 TATTCTGATGGTGAA GGCCCGTCG AGAT CGACGGGCC TTTTTGCTTTTTCTA 100 44 hypA NONE hypB 287264 .. 287282 + -3.8 -3.30124 GCGAACCGCATTCGC GCCGTT TAGTTCC GACGGC TTGTCAGCCGTCGGA 47 17 nadE 288469 .. 288483 + -3.4 -3.53712 GCAAAGGAGGTCGTC CGTCGT GGA GCGTCG TTCGTTCTTCAAACT 49 181 LT409_RS01220 290152 .. 290175 + -7.4 -2.71011 CCCATACCTACTAAA GC-CGCATGCG GCG CGCATCCGTGC TGCTTGAGAGGCCGT 50 169 LT409_RS01225 292021 .. 292037 + -5.8 -3.36327 CGCAGTAGACGTTGG GGATGG GATTG CCGTCC TTGTCCGTCAACTGG 53 202 LT409_RS01235 295216 .. 295226 + -2.4 -2.63913 GTATGGCGCACCTCG GGCG GGT CGCG TAGTATGGGGTCATG 38 75 LT409_RS01240 NONE LT409_RS01245 297292 .. 297311 + -7.2 -3.1829 AGCGCTCAGATTTCT TTGAATGC CCTT GCATTCAG TGTTGATGATGCTAT 54 135 LT409_RS01250 297804 .. 297855 + -9.3 -3.29511 CATAGCCACGAAGGT TCCGGGTGCTTGAGCTAAGCGGCC TTATT GGCCGTGT-GCGAAAGCTCCCGGG TTCTGAGCGGCTAGG 63 93 groL 299596 .. 299620 + -19.3 -3.91196 ACCATAATTCGGAAG GCGGGGCGACC ATC GGTCGTCCCGC TTTGCTGTATATGAG 100 70 LT409_RS01260 301793 .. 301805 + -2.6 -3.02829 GGGTCCCGTCGCGAG GGTC CGCCT GGCC TCTTCGCCCGCTGTC 41 114 LT409_RS01265 NONE rrf 305243 .. 305290 + -14 -3.13073 TCGGCATGCGAAGGC CCCGCCCCCCTCGGGAGGCGGGG CCT TCGCGCGTTCCG-GGGGCGTGGG TCTCTTGGTGACCGT 78 52 LT409_RS01275 NONE LT409_RS01280 306957 .. 306994 + -19.9 -3.53811 CCAGATTCCAAATGC AAACGGAGGCTCCGTCG TGTG CGACGGAGCCTCCGTGG TTTGAAGGGGCTCGG 100 47 LT409_RS01295 309104 .. 309123 + -11.4 -3.82202 ATGCGATTGTTCTTA GCGCGCCGC ATC GCGG-GCGC TTCTGTTTCAGACTG 80 57 LT409_RS01300 309199 .. 309211 + -9.1 -3.60818 CAGGTTCGAATCCTG GTGGC CCA GCCAC TTTGCGCGCTTTTCG 68 13 LT409_RS01310 311806 .. 311820 + -2.7 -3.62591 ATGATGAAGGCGACG GGCCC GACAA GGGCG TTTAGGGCTTCTCCC 49 6 LT409_RS01315 313033 .. 313059 + -15.9 -4.4715 GTATTTGTCCCCAAG CGAGCCGGTTG TTTTC CAGCCGGCTCG TTTTGTCGCTTGACC 100 59 LT409_RS01320 313986 .. 313999 + -3.1 -3.04398 TGCTTAACGACGATA TGCTT GAAG GAGCA CTTTTGACCAAAGAA 43 296 infA NONE rpmJ NONE rpsM NONE rpsK NONE rpsD NONE LT409_RS01350 NONE rplQ 317541 .. 317572 + -14.4 -4.08767 TTTTCAGATTGCTTT TCCGAACGGGGACC TGCG GGTCCCCGTTCTGC TTTTCAGAGGATGAA 95 48 LT409_RS01360 318040 .. 318054 + -2.8 -2.78395 AACGATACCTCTATC TGAAAG GAA CTATCA TGGTTGATCGGGCTT 39 47 LT409_RS01365 318526 .. 318547 + -15.1 -5.08088 CCGGCATCCTCCGAA GCCCGTGGC CAGC GCCGCGGGC TTTTTCTTGCCGGTT 100 132 LT409_RS01370 320352 .. 320374 + -12.6 -3.34043 GCGCGATTGTCACCC CGGCCGGTGC GCG GCGCCGTCCG TTGTGGCATACTGCC 76 45 LT409_RS01375 321259 .. 321270 + -4.4 -2.72839 GTAGTAGTGCTATCA CATC ATTT GATG TCATTCGGCATGCTT 43 37 LT409_RS01380 NONE LT409_RS01385 NONE eno 324238 .. 324257 + -15 -3.71848 TTCGCGAAACGAGAA GGGCTGCC TTTG GGCAGCCC TTCTTCATGAGCGGG 93 70 LT409_RS01400 326448 .. 326486 + -8 -3.61178 TTCGGCGCACCCCGG CCCCTCTCGCTGACTGAC TAC GCCAACCAGTGAGAGAGG TTTGACATGGATCGG 64 164 LT409_RS01405 326976 .. 326990 + -4.2 -3.39844 GGCGGGCATTAGGAA CCGC TTCCCCC GCGG TGTTTGACGTATGCG 49 29 LT409_RS01410 328649 .. 328661 + -4.7 -2.87211 ACGATTCGGGACGCG GCCCG GCT CAGGC TGTATGGAAAAACAT 45 93 LT409_RS01435 NONE alr NONE LT409_RS01445 337462 .. 337499 + -14.9 -4.08767 CCCCTTGCCTCATAC AGCCCCGTTAACGAAAG GTTT CTTTCGATAGCGGGGCC TTTTCGCAGCGTAAC 95 65 LT409_RS01455 NONE gltA 341510 .. 341527 + -6.2 -3.79906 CCCCTCGCTGACTTA CTGCGC CAACCC GCGCGG TTGTTCTCGCGCTGC 60 164 LT409_RS01465 343170 .. 343182 + -4.7 -3.65046 GCGGAACCAGTCCTG AGCGC TCG GCGCC TTCTTGGCGTCCAGC 55 236 LT409_RS01475 346270 .. 346310 + -17.6 -2.7185 AGCGTACCCCCCCCT GAACAAGCGAAGGCCCGCC GATC GGCGGGCCTTCGCG-GTGC TGCTTGCAGGGTCGT 84 53 nhaA NONE glmU 350660 .. 350686 + -18.8 -3.23708 ATAGCGGCAATAAAT GAGAGGGGCGAC ACG GTCGCTCCTCTC TCGTTTTTACAACGA 91 37 LT409_RS01500 NONE pth 352761 .. 352786 + -14.7 -4.55128 AGCGTTCAACTAGCG CGCACCCGTCG AAAG TGGCGGGTGCG TTTTCATTTCACCGT 100 28 LT409_RS01520 356813 .. 356868 + -22.1 -2.53015 AAGCGACCCGTCCAA GGAGGAGTCTCGTGCGCTTTAGCGAT TTTGC ATCGC-GAAGCGCGAGAGGCTCCTCC TGCGTTCGCGCATAT 100 115 LT409_RS01525 358361 .. 358414 + -13.3 -2.63823 GCCGTGCGCGGCCCA TCATCGCCCGAAAAACAC-GTCTCAG GTG CGAAAACCGTGTTTTACGGGCGATGA TGCGTTGTCTCGCTT 72 72 LT409_RS01535 NONE LT409_RS01540 362800 .. 362817 + -4.1 -4.09685 TTGGTTGCAGTCGAT CGATCAT CCGG AAGATCG TTTTCGACCCTGAAG 59 281 LT409_RS01545 363300 .. 363314 + -3.4 -3.82665 ATGCTAGCTTGCCGT GCGGGC GAG GTCGGC TTTCGTCATGTCGTC 54 47 LT409_RS01555 365151 .. 365166 + -3.3 -2.6834 CCGGAACGCGTAGGG GGTTT GCCATG AAACC GTTCATTCTGCTGCT 40 28 LT409_RS01560 366780 .. 366811 + -5 -2.52543 GGAGGACGAATGTGC GAGACGATAATCGC CTGC GCGATCGCCGCCTC TCGGTTGCGCGCGCT 42 57 LT409_RS01565 NONE LT409_RS01570 368966 .. 369007 + -11.4 -2.71712 GCCTCCACGATACGA TGCCATCCTGCGTGAGCG AGCGTG CGCACGCGCAGGTAGGCG ATTTGCAGCGACACG 62 514 LT409_RS01580 373019 .. 373029 + -3.2 -3.91897 CCTGCGCTGCTTGCG TGAG CGC CTCG TTTATGGGTGGGAAG 56 405 LT409_RS01590 374996 .. 375010 + -3.5 -4.15396 GGTCCCTCGGTCAAC TGCCG GTCGG CGGTA TTGTTTGCTTTGAAG 60 354 LT409_RS01605 379058 .. 379082 + -15.9 -2.56095 TAGGACGGTTTTGAA TTTGTGCAGAC GGT GTCTGCACAAA TGGGTTCGCTCTGCA 78 38 LT409_RS01615 380387 .. 380414 + -17.8 -5.41143 GACGGACTCGTTCAG CGCCGCAGGTGA TGAT TCATCTGCGGCG TTTTTTTGCGCCCTC 100 235 LT409_RS01620 381941 .. 381983 + -14.2 -3.15758 GGGCGCGACGCGTTA GTCGGTCCCTCGGCG-TGCT GGCTG GGCGGCGCCGAGGG-CCGGC TTCGTCAGCGCTTGT 78 128 LT409_RS01630 384206 .. 384220 + -10 -4.61482 GTCTTAGCGAACCAT GGTTGC CTG GCAACC TTCTTTTTTACCCAA 89 200 LT409_RS01635 385716 .. 385727 + -4.4 -3.73509 ACAGAATCGCGTCGA TTCC TGCC GGAA TTTCCCGTTTCCTAT 57 190 LT409_RS01650 390108 .. 390131 + -18.2 -4.18018 CGCCCAGCAACTTCC GGGCCGGATC GAAG GATCCGGCCC TTTTGCATGCGGGGA 100 121 LT409_RS01685 397707 .. 397733 + -10.8 -4.07568 TTGGCGCGTCGCTTC GGCTTCGTTGCG AAA CGCGACCAGGCC TTTTGCCGACGGCGC 80 118 recJ NONE LT409_RS01700 NONE LT409_RS01705 406034 .. 406059 + -3.9 -3.40371 AGGCCGCCCATCATG GCCACGA-TGCC GTT GGCAATCCCGGC TTGCTTCGTGAAGTA 49 232 LT409_RS01715 NONE LT409_RS01720 409015 .. 409045 + -4.8 -4.7416 TGTAACCGAAGGAAA GCGTGTCGAA GGGACGGGGGG TTTGACACGC TTTTTCCCGTTTTGC 78 36 LT409_RS01735 412478 .. 412501 + -4.5 -4.09685 CGCGCGGCGCGCGGG TTCGCGCAGC ATGCG GC-GCGCGGG TTTTACGGCCTCCGC 61 43 LT409_RS01740 414762 .. 414772 + -5.4 -3.35813 AGGGCGAACAGACGC GTGA TGG TCAC TTCCTTGAGGTGCGC 51 373 argF 417119 .. 417156 + -11.9 -2.98942 TAAACACGCTTCCCG GTACGCCGTGCGGCTCT GCGC AGGGTCGCACGGCAGGC TCTGTCTGCGAGGAT 68 38 LT409_RS01755 418770 .. 418792 + -17.7 -3.88559 CCCTCCGCGCTGCCC CCGGGGCGC CCCGC GCGCCCCGG TTTCTCAAACTGCTT 100 41 LT409_RS01760 NONE LT409_RS01765 420916 .. 420935 + -7.8 -4.83615 CCTCGGGAATTGTCA TGGGTGCG CTTT CGCGTCCA TTTTTCTCGCGAGTC 91 223 LT409_RS01770 422322 .. 422335 + -5.3 -4.08945 CATGGACAAAAAGCA CTACT TTTC AGTAG TTTTCGACGCGTAAT 65 120 LT409_RS01775 422852 .. 422909 + -27.1 -3.83375 AAGCTGTCTTCGGTT CGGGACGTCGCCCGCATGATCTGCTCG GTTT CGAGCGCATCATGCGGGCGACTGCTCG TTCTCTTCGTTTTCC 100 61 LT409_RS01780 424389 .. 424423 + -6.5 -3.1211 AGTCCTGAGCGTCAG GCG-G-CACCTACTTCT TGA GGAAGGAGGTGACTCGC TTGGATGCTATCGTG 52 108 LT409_RS01785 425787 .. 425812 + -23.3 -2.52543 GCATCGTGCTTGTTC CGGCGGCCGCC TTCG GGCGGCCGCCG TGCGTTGGGAAACGT 100 51 LT409_RS01790 428223 .. 428240 + -3.3 -3.72695 CTCTACGAGATCGTG GGGTAGC GCTC GCGATCC TTTCCTGCGCCAAGT 54 20 LT409_RS01795 NONE LT409_RS01800 429639 .. 429651 + -4.1 -4.39287 TGCCGAAGGCCGGCT TGCTT GCG AAGCG TTTTGATGTCGTTCC 69 215 LT409_RS01815 430456 .. 430479 + -6 -3.14132 CCGCTCGCGCGTGAT GCGCTGA-TGC CAA GCACTAAGCGC TTGGTAAAGGAGACG 50 41 LT409_RS01820 430857 .. 430874 + -14.1 -3.53091 GGAGCGATAGTCAAA GCGGCCC CGCA GGGCCGC TTTCGGAAACGCGCT 86 31 LT409_RS01835 NONE LT409_RS01840 439293 .. 439327 + -17 -3.53343 AACGACGAGCGAGTT GACGCGGGGCGGGCCG GAG CGGCTCGCCCCGTTGC TTTCGGAAGGAGGTT 100 43 LT409_RS01845 439925 .. 439937 + -2.6 -4.04209 TCACGTGAAACAACT CGGC CCTTC GCTG TTTCTAGTGGTTTGA 57 108 LT409_RS01850 441367 .. 441394 + -4.8 -3.50393 CTGCAAATCGCGGCA GCGTGT-CGCCTC GAG GAGGGGTACACTC TTCTCTGGGGTAGCA 52 84 LT409_RS01855 NONE LT409_RS01860 442718 .. 442741 + -13.9 -5.252 ACCCGCGAACCTGGC CGCCGCATC CATAGT GATGCGGCG TTTTTTGTGCGCGTC 100 85 LT409_RS01865 444322 .. 444358 + -5.2 -3.10732 TCGACCGTCTTTCGC TCGAGGTCGACGCCGTGG CCG TC-CGGTTTC-ACCTCGA TATTCAACTTGATCT 47 314 rsmI NONE LT409_RS01910 NONE LT409_RS01915 455291 .. 455308 + -8.4 -3.14211 GCACCGTATGAAAGC CGCAGG TCGTGC CCTGCG TTCGTCCGAGCGCGT 57 188 LT409_RS01920 457580 .. 457625 + -10.3 -3.6215 TCGCCGCTTTGCGGG CCGTAGGCGCCGAAGCCGGCA TGGT TGCCGCCTTCGATCTCCACGG TTTCGGCTCCCTTGG 71 177 LT409_RS01930 460091 .. 460106 + -6.8 -4.56597 GATCAGGGATTCAAA CTTCCG AATT CGGAGG TTTTTCGCCACCGAG 76 199 LT409_RS01935 NONE LT409_RS01940 461121 .. 461132 + -3.6 -3.53722 ACCACGCCCATGTCG GGGC GGCG GCTC TTGTATGCGTCTCGC 49 361 metG NONE LT409_RS01960 NONE LT409_RS01965 NONE LT409_RS01970 NONE LT409_RS01975 467579 .. 467598 + -5.6 -2.95448 CGCCGGCGAGCCCTC G-CGGGACG GCC CGGCCCGGC TATGTCAATATTGGT 48 412 LT409_RS01985 468503 .. 468526 + -16 -4.81249 GTTCCGGCAAACCGA CGGGTGTCGC AAGC GCGGCACCCG TTTTTGCGTTTCCGG 100 54 LT409_RS01990 470102 .. 470123 + -4.3 -3.05816 GGATCGCATCGCGCT CGCGGGC GAACGCCA GGCCGCG TTCGATCCCCAATGC 45 87 LT409_RS02000 473188 .. 473215 + -10.5 -3.36492 GTCTGCGGTCAAGAA GGTCGGCGTCC GTGCAA GGGCGTCGGCC TTCTCCCGTTCGGCG 68 74 LT409_RS02010 475234 .. 475261 + -5.6 -5.38958 ATTGCGTTATTACAA GGCCTCTTTC ATACTTGA GGAAGAGGTC TTTTTGTTTGTGGAT 91 150 LT409_RS02015 475825 .. 475836 + -4.4 -3.82084 CCTTGTAGGTGGGCT CGAT GCCA ATCG TTCTTCATCTTGACG 57 33 LT409_RS02020 476086 .. 476116 + -2.7 -3.55761 TGTAAGCCCCGTTCG TGTGCATTTTGCAGA TCG TCTGCA-ATTGC-CA TTTGACAAATGCCTC 47 36 LT409_RS02025 476264 .. 476292 + -22.5 -4.59773 ACCACGGAAACCTGA TCGGGGCGAGGCC AAC GGCTTCGCCCCGA TTTTTCAAGGTGCGA 100 37 LT409_RS02035 NONE dgt NONE LT409_RS02045 480562 .. 480594 + -6.8 -3.78934 TCAAGGCGTTCCGTT CCGCGCGAAGCGAC GGTTA GGCGTTACGCGAGG TTCTTCTCAAGGCGG 63 6 LT409_RS02050 NONE LT409_RS02055 483108 .. 483143 + -7.6 -3.05596 GATCCGGCTTCGGCA GCGGGCCGTTCGAGCC CCTCCT GGCTTG--CGGCCTGC TTGGGTCGGCGGCTG 56 266 LT409_RS02060 484727 .. 484757 + -20.6 -3.06492 ACGTCTTTAGAGGGG TGGGGAAAGGAAGC CTG GCTTCCTTTCCCCG TCTTAGGGTCCCTCG 95 62 LT409_RS02065 485750 .. 485789 + -15 -4.37886 CCGAATAAGCAAGAG GGAGCCCGCCGAAGCG CCATCGTA CGCTTGGACGGGCTCC TTTTGTCAAAGGTCC 100 79 LT409_RS02070 NONE ccsA NONE LT409_RS02080 NONE LT409_RS02085 490432 .. 490448 + -7.9 -4.19506 CTGCGAGGCGCCCTG GCGCCGA AAC TCGCCGC TTTTGCGCTTGCCCT 75 79 LT409_RS02090 NONE LT409_RS02095 491601 .. 491640 + -2.7 -3.09018 CGGTTCTGGAAGAGG CCGTCGCGGAACTGC AGGCAAAGTA GCAGGATGGCGACGG GTTTTCCCGTCGTGC 41 0 LT409_RS02100 492573 .. 492614 + -14.6 -2.87468 CCGAGCGTAACGGAG CGATTGCGAAGGCCTGCCG TCATC TGGCAGGCCTTCG-AATAG TATAATGTCCTCGAA 79 56 LT409_RS02105 NONE LT409_RS02110 497003 .. 497023 + -3.9 -3.36968 ACGATGATGTTCTGG CCTTTCGCT TGC AGCAAGGGG TTGTCGGGTTGCATG 49 249 LT409_RS02125 NONE LT409_RS02130 502726 .. 502771 + -5.9 -3.78934 CGCGTGGGGCGAGGC CGCTGCGGCCGGCGGGGGC ATCGGTGC GAGCCCGTCGTTCGCGGTG TTCTTCTGGCGAAGC 60 41 LT409_RS02135 NONE nrdG 505966 .. 505982 + -2.1 -3.90112 TAAAGCCCCCATCGT GGTGAGG CGC CGTCTCC TTTCCTTGGCGACGG 54 21 LT409_RS02145 NONE LT409_RS02150 508085 .. 508108 + -9.4 -4.4009 GCGCTCGACGGCGAA GCGCCCCGCC GGTC GACAGGGCGC TTTTCTCGCATGCGC 82 42 LT409_RS02175 NONE pstC NONE pstA NONE pstB 516139 .. 516196 + -10 -3.5556 CAGCGCCGAAGTCGC G-GCC--TGTCATCCTGAGCGGAGGCGGC AAA GCCGCGTTCCCTCAGGATGACAAAGGGGC TTCCTTTCGGCTTTA 70 65 LT409_RS02195 517003 .. 517023 + -4.6 -2.76261 AAACCCTCCTCGTGA GCG-CGCGC ATGA GCCCGACGC ATTTCAAGGTTAAGA 43 26 LT409_RS02200 518462 .. 518476 + -3.4 -3.8062 TTTTTGCGCCCTCTC CGGAGG GCG CTGCCG TTCTTCTGGAGCTTG 54 70 LT409_RS02205 520612 .. 520642 + -5.4 -4.08767 ATCTTCTCTATGCAT TCGAGGCTGGGA TTTCTCT TCCCGCCTTCGA TTTTCGCCAGGTAAG 64 288 LT409_RS02225 523917 .. 523937 + -16.1 -3.01791 CGATCTATACACGGA GGCGGCCGG TTT CCGGTCGCC TCTTGCAAGGAGCGT 83 52 LT409_RS02230 NONE LT409_RS02235 525753 .. 525784 + -15.9 -3.28712 ATGCATATCGTTTCA GGGCCCC-GCTTGG TTTGT CCGAGCCGGGGCCC TTCTCGCGAAAGGAA 89 63 LT409_RS02240 527326 .. 527340 + -7.2 -3.42395 ATTCATCAGGTGAAA CATTTG CTT CAAATG TGTTTCGCTCGTAGG 58 113 LT409_RS02245 529324 .. 529351 + -3.5 -3.05844 GTCGGGGGAGGGACG TGCGATGTGC AGGGAGGGA GC-CATCGCA TGTTCGACTCCCAGA 43 223 LT409_RS02250 530234 .. 530244 + -6.8 -4.26188 AGTATGGCTACGAGG GCAG GAC CTGC TTTTGAGTATATGGG 71 186 LT409_RS02255 531875 .. 531885 + -6.8 -2.67515 GGCCTGTATATCATC CGAG GTG CTCG TGCTATAGTAATAGC 49 84 LT409_RS02260 NONE LT409_RS02265 534036 .. 534049 + -8.1 -2.77899 CTGAGCGCGTGGAGG CGTGC GGGC GCACG TCGTTAGTGGAGCAG 53 56 alaS 536980 .. 537006 + -12.3 -5.1861 GGGCGTCTTTTTCGG CGGCTTCTCCG TGAAT CGGAGAAGCCC TTTTTTCATCCTGGG 100 260 ruvX 537849 .. 537869 + -3.2 -3.14132 GTTTTTGCAGGCGTG GCTTGACG CGCGC CGTGAGGC TTGATGGAAGAAGAG 45 1 mltG 539058 .. 539071 + -2.3 -2.80077 GTTCTCCTAGGCCGT TAGCG ACAA CGCCA TGGCTTTTCTCGAAC 39 31 LT409_RS02285 539614 .. 539628 + -7.1 -2.62184 GAGGATGAGGAACCC GACGC GCAGG GCGTC TGATGTGAACGAGCG 49 8 LT409_RS02290 540682 .. 540728 + -12.2 -2.73364 CGCGGAGTCGAAGGA TCCCGTGAGGCGCCAGCTGAAA GCG TCTCGGTTGGCACCGTGCGGGA TCCTTCGCGTCCCCG 69 101 aroC NONE LT409_RS02300 NONE aroB NONE aroQ NONE LT409_RS02315 545350 .. 545366 + -5.8 -3.85698 TCCTGTAGCCGGTTC TCCGCC CGGGC GGTGGA TTTCTGGGCGCAAAA 62 33 efp 546294 .. 546318 + -22.9 -4.75472 TCGGCTCAATGGAAA CGAGGGCGCCC GAC GGGCGCCCTCG TTTTGTTCGTCTACA 100 59 accB NONE accC NONE LT409_RS02340 NONE nusB NONE LT409_RS02350 551310 .. 551336 + -6.5 -3.03243 CGTCTGCGCAGGAGA CGGG-TGCGCCG GTTT CGGCGTAGCCCC TGTTGAAGGATGCAT 52 3 dxs 553252 .. 553281 + -25.1 -4.94058 CGTTCTTGGCATGAA GGCGCCGGCTGCA ATTG TGCAGCCGGCGCC TTTTCTTTACATTCG 100 48 LT409_RS02360 554525 .. 554547 + -20.6 -3.80114 CCGCCCGGAAATGCT GCGACCCCCG GAT CGGGGGTCGC TTTCATGCGTTAGTC 100 69 LT409_RS02375 NONE LT409_RS02380 557579 .. 557600 + -12.9 -2.59431 CGTGACGGCTCCGTA GGGGCGGCC TGCT GGCCGCCCG TCGCTTCTCGGCGCC 68 75 LT409_RS02385 558325 .. 558349 + -17.2 -2.84812 GGTTCGTTAAAATGA GCACAGCGGC CGGGT GCCGCTGTGC TATACTACTATGGCT 85 86 rpsA 559766 .. 559791 + -19.1 -4.4261 ATAACGCGTATATGA GAAGGCCGGTC GCAA GACCGGCCTTC TTTTGCTATTGGAGC 100 52 mnmA NONE coaE 565297 .. 565323 + -10.8 -4.56133 TCCCTGGTAAAGCTG CGGGCTTCGGTT CTT GGCCGGAGCCTG TTTTGGTTGTTGGGG 89 174 LT409_RS02420 567221 .. 567248 + -9 -3.38812 GCGAAGTTTTACGTT GCGCGGCTCCGA CGCG TCGGTGCTCCGC TGTTGTTCGGAAGGA 63 98 uvrB 569439 .. 569470 + -9.4 -3.59979 GCCCGAGAGGCCGCT CG-TCGCGTGAAGCG CGC CGCTCGACGCGATCG TTTCGGGTGGAAAAG 68 45 LT409_RS02430 570399 .. 570431 + -21.3 -3.74077 CTAACTCGGCGAAAA CGGGGGCTGCTCGAC AGT GTCGGACAGCCCCCG TTTCGATGTCTCGAG 100 65 LT409_RS02450 574584 .. 574594 + -4.6 -2.82623 AGGGGATGTAGTTGA TCGC TTT GCGG TGGTTGTCGGAAAAC 45 249 LT409_RS02475 577895 .. 577913 + -5.3 -3.36492 GGCAAGTTCCGCGCC G-GCAAGC AGGC GCTTGCGC TTCTCGCCTTGGGCG 51 401 LT409_RS02485 579185 .. 579207 + -5.5 -3.11634 CCTCGTCGGGCGCGC CCGCCTC GGTGAACGA GGGGCGG TTGCCTCGTCTGCAG 49 220 LT409_RS02495 580327 .. 580349 + -9.8 -3.09516 CTCATGGCCGGCTGC GGCTCGCTCA GCG TGAGCGGCCC TTGCGTGATGGAGAA 60 219 LT409_RS02515 584703 .. 584732 + -3.5 -3.53563 CGGAGAGAAATTGTG CGAGCGATGTTTC ACGT GAAGCATCGGGTG TTTCAGAACACATGT 49 59 LT409_RS02520 585771 .. 585803 + -6.9 -2.70932 AAAAATTGCACGCGT CTGTTGACCCTCACG TAA CGTGAGGGTGTACGC TGGTTGCACGCAGGA 50 165 LT409_RS02525 586614 .. 586650 + -23.1 -3.08679 TACTGCGCATAGGAA TGTGCGCCCCGCCGCC TTTCGC GGCGGCGGGGCGC-CA TCTTCGCTCGCAAAA 100 29 LT409_RS02545 593218 .. 593237 + -12.8 -2.94199 GGCGAATCCGCTTCG GCGGCGCG CCCT CGCGCTGC TATACTTGATGGCTC 70 109 recN 595005 .. 595015 + -4.6 -5.13741 GCCGGATAGCCCAAG CGGG CGA CTCG TTTTTCTTGCGTTCC 83 32 LT409_RS02565 600709 .. 600737 + -17.6 -4.8622 ACCGCAGGTTTACAA GACCTGTCCTTC GATGA GAAGGACAGGTC TTTTTCATTGCGGGG 100 440 LT409_RS02570 NONE LT409_RS02575 NONE LT409_RS02580 NONE LT409_RS02585 604509 .. 604520 + -5.8 -2.80791 AAGCGCTGGCCTTTC TGCC ACGC GGCA TCGCTTTTCTGGGTC 47 491 LT409_RS02600 606437 .. 606451 + -3.4 -4.07885 CTGTTCGCGTATAGA CGGTAG GTG CGGCCG TTTTCGCGCGCCGTC 60 206 LT409_RS02610 608707 .. 608733 + -10 -2.73483 CTTTGCATTCGCGCT TGCGCCCGTCGC AGC GCGAGCGGCGCG TGCTTCGGATGCGAT 61 68 LT409_RS02660 617918 .. 617958 + -17.7 -3.05715 ACCATCCCCTCTCCT AGC-CGAAGGGCCGCATC GAGCAA GATGCGGCCCTTCGCGCG TTGGATCCGCGACTT 89 55 LT409_RS02670 620341 .. 620361 + -2.3 -4.67641 AAATGCCGGAAAACG CGTGCGAGC AGG GCGCGGTCG TTTTCATTTTCGGGT 68 108 pyrH NONE frr 621809 .. 621838 + -21.5 -2.98387 CCGAATTAAATCTCC GAAGCCGGCGGCC ATGA GGCCGTCGGCTTC TCGTCTTTTGTGAGG 100 51 LT409_RS02685 NONE LT409_RS02690 NONE dxr 625035 .. 625053 + -3 -4.24948 GCGCGCTTGCGCAAG GTAGGTCG GAT CGACGAAC TTTTCGATGTCGTCG 64 169 LT409_RS02710 627332 .. 627359 + -16.4 -3.09635 TTCGGCGTTGCGGTC G-GCGCGCAAGTC CTT GACTTGCGCGCGC TTCCGTCATCGAAAT 83 82 LT409_RS02715 629120 .. 629138 + -5.9 -4.18018 GATGGCGCGTCGGCG CGTGCGA CTCGT TCGCTCG TTTTCCCTCCCGCGC 68 134 ispG NONE LT409_RS02725 632287 .. 632307 + -5.3 -3.14211 CCCGCGATCTCGGGC GTCAGGGCG CCT CTCGCTGAC TTACTGCGCCAACCT 50 159 LT409_RS02730 633359 .. 633372 + -3.8 -3.84451 GGGCTCCACGTCGTT CGCT CGGAAC AGCG TTTCCATTTCCGACG 58 355 LT409_RS02740 635316 .. 635351 + -16.3 -3.91858 CCCCTGTTCGCATCC TGAA-CGGCGAGCGGA CGGTC TCCGCTCGCCGCTTCG TTTCTGCCGTCTGTG 95 63 LT409_RS02745 635810 .. 635837 + -4.8 -4.33165 TCCTTTGACGGCTTC GCTCA-TGCTCGC GTT GCGAGCATTGCCC TTTTCGTCGATTTGG 68 119 LT409_RS02750 636298 .. 636344 + -4 -4.15748 CGCCGGGCGCCTAGC GCACGGCTGCGAGCTGCCCGTC CAT GCCGGAGAACACGCTGCTGCGC TATTTTTTCAGCTCC 62 27 LT409_RS02755 637982 .. 637992 + -3.2 -4.14392 CAAGCTGTAGCGCCG GGGA GCT TCTC TTTTCCCAGTTCAAA 62 31 LT409_RS02760 639267 .. 639295 + -21.1 -3.72576 TGGACGCGCAGTAAA GAACCGGGTCGCA TCT TGCGGCCCGGTTC TTTACTGCGACGAGG 100 27 nrfD 640313 .. 640326 + -3.8 -3.00774 GAGTCTGCTATCGTT CTGG ATGTAG CCAG TCTGTCATTGCGATA 43 16 LT409_RS02770 NONE LT409_RS02775 641807 .. 641832 + -4 -3.6502 TCGAATCGCGTATGC TGCCTGGGCCG TCGCT TGGTCCAG-CA TTTCCATGGCCGATG 51 78 LT409_RS02780 NONE LT409_RS02785 645395 .. 645434 + -12.2 -3.60627 TCGCCTTCCCTCCCT CTCCGGGC-GGCGGC CTTTTCGGGTC GCCGCCCGCTCGGAG TTTCGAATGCGATCG 82 43 fdhD 646342 .. 646372 + -21.2 -3.17797 TTCGGAAACGAAGAA GCGCCGCGCATCTT GAA ACGATGCGCGGCGC TTACCTATATATAGG 100 54 LT409_RS02800 NONE LT409_RS02805 NONE LT409_RS02810 NONE LT409_RS02815 652111 .. 652129 + -3 -4.56883 GTTTTGGCCTGAATG GCTAGGGC GAA GCCGTATC TTTATTTCGTCTTGC 66 236 loaP 652839 .. 652854 + -2.6 -4.47786 ACACGATGGGCGTGA T-GGAGA CGA TCTCCCA TTTCTTTCCCTGCTT 66 191 LT409_RS02835 655246 .. 655266 + -6.7 -2.79133 TCTTGCACGTTTCCG CCGACGTCG GTG CGTCTTCGG TATAATCAAACCTTG 50 457 LT409_RS02845 655839 .. 655850 + -7.2 -2.82623 GAAGCCGCCCGCAAT GGCG AGGC CGCC TAGTTGTCCCAACCG 50 40 LT409_RS02850 NONE LT409_RS02855 657650 .. 657662 + -5.5 -3.9122 CGTCTCTCCCGCGGG CACCG AGA TGGTG TTGTTTGCGAACGTC 62 500 LT409_RS02865 659035 .. 659060 + -13.9 -3.32498 GCGATACGCTGAAGA TGCGCGCGGGG GCTT CCCCGGGCGCG TTCCTATCTGCCATA 81 90 rlmB 659999 .. 660016 + -6.9 -5.04601 CCCTCCTATTTACAA ACCCCCT GTTC AGGGGGC TTTTTCATTTCTAGG 89 129 LT409_RS02875 660632 .. 660658 + -13.7 -4.87626 ACGTCCGCTGATATC GGCACGGGTCC CTGTC GGGCCTGTGCC TTTTTCGTCTTGCAC 100 30 LT409_RS02880 NONE LT409_RS02885 NONE LT409_RS02890 NONE LT409_RS02895 663944 .. 663970 + -4.2 -3.59979 TATGAGGGCGCACGG CCGCGCGCCCTC CCT GAGGGATTGGGG TTTCCCGTGGAGAAG 54 117 LT409_RS02900 664323 .. 664350 + -2.6 -3.04398 GCGCGGGCTCGCACC GCCGGC-CCCATC GGT GATCGGCGCTAGC ATTTTGCAGAAGGAC 41 9 LT409_RS02905 665471 .. 665484 + -9.5 -3.59979 TGGGGGGGTGCGGAT GCGCC CGCA GGCGC TTTGGCATACACACG 68 46 LT409_RS02910 665904 .. 665936 + -13.4 -3.91488 GCACATAGCCGCACA CGCGCCCATCG-GGC TCCA GCCTCGGTGGGCGCC TTGTTTCCGGCCGTT 91 140 LT409_RS02915 666504 .. 666514 + -3.2 -2.87132 AGCCCGGTCCGCCCC CGAC GAA GTTG TCTATAACCGGGCGG 42 81 LT409_RS02920 NONE LT409_RS02925 668436 .. 668468 + -12.1 -4.65895 GTAGTACCGGGGCGG GCCGCCCGCAC-GTC GCGCA GACCGT-CGGGCGGC TTTTTACATCGAAGG 100 115 LT409_RS02930 669135 .. 669166 + -12.2 -3.28791 AGACGCACAGATGAA TAGGCCGCGACCCC TTAC GAGATCGCGGCCTG TTCTCGGACCGAAGT 76 164 LT409_RS02935 671286 .. 671324 + -13.2 -4.07687 AGCGGTAGCGACAAC GGAAATGGGAAGGCCG AATCTCC CGGCCTCCCCATTTCA TTTTCGCGGGCGGAT 95 33 LT409_RS02960 NONE LT409_RS02965 679760 .. 679781 + -7.3 -2.98356 CCCCGCTCGCACGTC CACGCATAT ATGT ATATGCGCG TCTATGCGTTTACGT 52 45 LT409_RS02970 NONE LT409_RS02975 NONE LT409_RS02980 680977 .. 680998 + -10.1 -4.50976 ACATCATTGAGACAG GGGCTTCGG GCAA CCGGAGCTC TTTTCTAATATGAGC 89 31 LT409_RS03010 684986 .. 685002 + -2.2 -3.28712 CCCCGGACCCTAACC GGCG CCGAACGCA CGCC TTCTGAACCGCCCCG 44 3 LT409_RS03015 685720 .. 685741 + -12.9 -4.7373 CATACTCAAGTGATC GCCCCACCG GAGA CGGCGGGGC TTTTTCATGCCGTAG 100 57 LT409_RS03020 686325 .. 686354 + -10 -3.57263 GCAAGAATAAGTAAA CGCGCATCCGCA CAGGTA TGCAGATGTGCG TTTACGCATCCGCAT 73 53 LT409_RS03025 687070 .. 687114 + -2.8 -4.65895 CAAGGTGGAGGCGAT GCTGT-AATGGCGAGGACC AAGAAGGC GGACTCCGCCATCAACAGC TTTTTCACTGACACC 68 19 LT409_RS03030 NONE LT409_RS03035 NONE LT409_RS03040 688650 .. 688668 + -4.4 -2.73441 CTACGACGTTATGGA GGCCCCGT TCA AGGAGGCC ATTTGAAGGGTGCTG 43 1 LT409_RS03045 690502 .. 690535 + -21.1 -4.56597 GGTTTCAAGTAGCAC AGATCCCCGCCATCG GAAC CGATGGCGGGGATCC TTTTTGCGCAACGCG 100 29 LT409_RS03050 691077 .. 691103 + -20.9 -4.8048 GGTCGCCGGGCGAGA GGCCGCCACCG GAACA CGGTGGCGGCC TTTTTCATGTCGCGA 100 57 LT409_RS03060 NONE LT409_RS03065 NONE LT409_RS03070 695586 .. 695626 + -7.4 -3.54543 GACCGCGACGATGCC CGCGGC-GGCAATGCGCCCG CCG CGGGCGTTCCGCCTGCC-CG TTTGCGGCGATGCCT 58 45 LT409_RS03075 695845 .. 695865 + -9.7 -4.70659 GCAACGCCCATACGA GGCACCC AGGCAAC GGGTGCC TTTTTCGCTATCCGC 85 84 LT409_RS03080 NONE LT409_RS03085 NONE LT409_RS03090 697960 .. 697971 + -5.8 -3.71378 CGATCCCGACGATAT CTCG ATTG CGAG TTTGCGTCTGGAATG 60 342 LT409_RS03115 NONE LT409_RS03120 702995 .. 703036 + -7.3 -3.27475 CGCCGCCCGCGAGCA GCGTGGCGAGGCGGC-AAAC GTC GTTTCGGTGCTTCTTCACGC TCTTCTCGTCGACGG 57 454 LT409_RS03215 728290 .. 728314 + -14.9 -4.015 CTCCGCCCTCGTGGT GCCGGCCCGGG CCT CCCCGGTCGGC TTCTTTACTGCATGC 95 72 LT409_RS03250 733742 .. 733754 + -5.5 -4.22375 ACGCGGGAACGGAGG CTCGA TAA TCGGG TTTATTCACTAATGT 68 393 LT409_RS03270 736664 .. 736713 + -11.4 -2.71447 CTAATTCGCGACGTC AGTGCGCAAGGAGGTCAACGAG AGTCCG CTCGTCGACCTCCTTGCCCGAA TCATATCTCATCGAT 65 37 LT409_RS03370 756506 .. 756520 + -7 -4.08216 CTTCGAGCGCGGCAT CGAGCG CGG CGCCCG TTTTACGCCCCATCG 68 314 LT409_RS03495 787369 .. 787390 + -8.7 -4.59773 GTGCATCTATGCATT TGCGCAGGT ATGC GCCTGCGTA TTTTTGCGGATCAAG 85 104 LT409_RS03515 NONE LT409_RS03520 NONE LT409_RS03525 795584 .. 795603 + -12.8 -3.17763 CAGGGGTAGCGCGAA CGGGGGTG TCGG CGCCCCCG TTCGTCACCTCTCGC 74 32 LT409_RS03540 NONE LT409_RS03545 799543 .. 799599 + -11.6 -3.63266 TTCGGCGCTGCGTTC GGGATGACGAC--GGCATGCTTCGACTC GGT GTGTCGAAGCATGCCAAGCCCTCGCCCC TTTGCCGTCCGTTTT 77 151 nrfD NONE LT409_RS03555 NONE LT409_RS03560 802262 .. 802300 + -14.1 -2.56596 ACAATGCCGGTTTCG TCCAGGCACAGATGTTTC ACGT GAAACATCTGTGCC-GTA TCGCTTGATAAACCC 72 283 LT409_RS03565 NONE LT409_RS03570 NONE nrfD 806981 .. 807010 + -19.4 -3.48593 TGACAGGGACGCTTC GGAAGGAGCGCG GCTTCG CGCGCTCCTTCC TTGTCTGACGAGGTG 100 38 LT409_RS03580 NONE LT409_RS03585 NONE LT409_RS03590 808573 .. 808613 + -22.9 -3.53444 CCATCTTGCCGCGAG CCTCTGACCAGGTAAAATA ATG TATATTACCTGGTCAGAGG TTTGACAAAAAATGA 100 67 nrfD NONE LT409_RS03610 NONE LT409_RS03615 NONE LT409_RS03620 813686 .. 813699 + -3.1 -3.37344 TAGCTCGCTGTGCGA TGTCG ATCT CGATA TTCGTTCCGTCCGAG 47 38 LT409_RS03625 814952 .. 814965 + -5.3 -2.62184 GACTATGACAAGAAG GAATC GGCC GATTC TGATATGAGGGGGGA 46 169 LT409_RS03630 NONE LT409_RS03635 NONE nrfD NONE LT409_RS03645 820033 .. 820084 + -18 -3.57792 ATGTCGATCGGGTTG CGCGCGCCCTTCCGCGA-TGCGTCC GCG GGACGCGTTTGCGGAACTGCGGGCG TTTGGCGCTCGATGC 100 196 LT409_RS03650 NONE LT409_RS03655 NONE LT409_RS03660 822563 .. 822595 + -2.5 -3.83026 GCGCGACTCGGCCTG CGCGGCGAAGCGC ATCACCA GCACGTCGTCGCC TTTCATGTGCCCGCC 55 229 LT409_RS03675 NONE LT409_RS03680 825273 .. 825285 + -2.6 -3.74519 GCTTGACATGCGCTT GGGC GAATA GCTC TTTCGTGCGCCTCTT 52 16 LT409_RS03685 NONE LT409_RS03690 828074 .. 828132 + -21.9 -4.02302 GGTGGTACCGCGAGA GCCTTCTCTCGTCCTTGGACTT-TGGGC GCAT GCCCTCAGGAGCAAGGACGAGAGAAGGC TCTTTTTCATATGCG 100 342 pheS 829320 .. 829342 + -12 -2.53759 CTGCGCTGCGAAACT CGCTTGGTGG ACC TCGCCAAGCG TCCCTTCGCACTGTT 64 90 pheT 831895 .. 831942 + -16.2 -2.64933 GGTAGGTCCGCCCTC CAGGCGCGGCTGGCGCTCGGGTT GCC ATCCCGAGCGCAGGCT-CGCCCG TGCTGTCCCTGCGTC 78 36 LT409_RS03705 NONE LT409_RS03710 832920 .. 832943 + -9.6 -2.57132 CAACGGACGCACACC TG-CGTGCGGC GCC GCCGTACGACA ATTATGCGGACGGCG 56 275 LT409_RS03715 833843 .. 833873 + -3.2 -3.83347 GGAGCGGGCGGGACG GGCAGAGTGGGA TGCGATC TCCCGATCTTCC TTCTCTTTCCGATGT 54 173 LT409_RS03720 834807 .. 834839 + -10.6 -2.72096 CACGGAAGACGGCCA CGAGCTGCTTTCCT GGTAG AGGACAACAGCTCG GTTGTCGTTCCTCGA 61 7 LT409_RS03735 NONE LT409_RS03740 NONE LT409_RS03745 841530 .. 841545 + -11.8 -3.01712 GCGAGAACGGGAACA GGCGCC CGCA GGCGCC TGTTCCCGAACGAAG 68 87 LT409_RS03770 845919 .. 845963 + -8.4 -2.59431 AGGTATCCTGAAGAG GCGCGCCTCGAGGCGCGTTCG GACA TGGACGCGTCGCGTGCC-CGC TGCATTGTCGCCCGA 52 30 LT409_RS03775 NONE LT409_RS03780 846711 .. 846768 + -31.1 -2.87132 CGAGCTCGTCCGCCG CATTATCGGCCGAAAAACACGGTTTTG CGCA TAAATCCGTGTTTTTCGGCCGATAATG TGTATGGGGGAGCCG 100 65 argC NONE argJ NONE argB NONE LT409_RS03800 851606 .. 851624 + -7.4 -2.82516 GAAGCTTGCGGCGCT GTTGTCCT GAA AGGGCAGC TGTCATCCTGAGCGA 50 16 LT409_RS03805 852392 .. 852412 + -7.6 -2.75825 CGCCATCGACCGACT G-CGACGAC GCTA GTCGTCGAC TACATTTCTTGGCGG 53 13 LT409_RS03810 NONE argH 855643 .. 855656 + -3.7 -4.1721 CAACCACGTTTTGAG CTCCC GACC GGGCG TTTTCCCGTGTGACT 62 199 LT409_RS03820 NONE LT409_RS03825 858640 .. 858663 + -17.4 -3.66178 CGCACACTGCTTTGA GCGGCGGCCC TTTC GGGCTGCCGC TTTCGCATTCGACCA 100 53 LT409_RS03830 859459 .. 859475 + -10.1 -3.74693 CGCACGGCATTCCTA CGAGCCT TCC GGGCTCG TTTCGTCGCGTCGGC 76 41 LT409_RS03835 NONE acnA 863331 .. 863359 + -16 -4.03078 GAAGAGGTAACGTCG GCGCCCGATTGC GAAGA GCGGTCGGGCGC TTTGTCGTATACTGG 100 42 LT409_RS03845 865480 .. 865511 + -20.2 -4.67697 AGTTTCGCGCTTTGA CGACCCCTGCTGTC ACGA GACGGCGGGGGTCG TTTCTTGTTTTCAAG 100 169 rplJ 866159 .. 866178 + -7 -2.71791 GAACGTTACACATAC CGGTCGGG GAGA CCCGGCCA CTTTGAAAGGAAACT 50 78 rplL 866621 .. 866641 + -16.9 -3.07962 CATGCTTGTAGAAGA GACCCCCAG ATC CTGGGGGTC TCTTAACGTCTGACG 87 72 LT409_RS03860 867722 .. 867754 + -22.1 -3.53031 GTTGTTGTGCGATTT TGGGCCGTCGAAGCG TTG TGCTTCGACGGCCCG TTCGTTTAAGGTAGA 100 50 LT409_RS03865 869870 .. 869883 + -8.1 -3.2963 TCGGCATTGATGCCG CACGG CGGG CCGTG TTGTGGCAAAATACT 59 31 LT409_RS03870 NONE LT409_RS03875 871845 .. 871871 + -18.7 -5.14563 GGTGACGACAGGGAA GGGCCGCGTCC GAGAG GGGCGCGGCCC TTTTTTCGTGCGCGC 100 103 feoB 875830 .. 875843 + -9.5 -3.02043 AACCACCTGGATGTT CGGCG TTGC CGCCG TCTTGCGGCGGAATT 59 355 ahpC 878631 .. 878656 + -18.3 -4.1466 AGCGGAACCGATCGG CGCCCGATCCC CTGC GGGGTCGGGCG TTTTCGCGCTTACGT 100 69 LT409_RS03925 884263 .. 884277 + -3.4 -3.74178 CATCGGCTTCAAGCT GGCATG ATG CGGGCC TTTACGCTTTCCTTA 54 19 LT409_RS03930 NONE LT409_RS03935 NONE LT409_RS03940 887384 .. 887396 + -4.8 -3.7282 GAAGGGGATGGTCAG CGTG GAGCA CACG TTCTTCGTGGCGTAG 58 385 LT409_RS03955 894029 .. 894048 + -5.6 -3.59247 GTGGTTCAACCTGAC GGGCGTCGC TTC GCT-CGCCC TTTGCGCCATTGTTC 57 319 LT409_RS03960 895152 .. 895181 + -9.2 -3.6869 GTAGGGTGCGAGTCG CTCCCGCTTGCG CACCCT CGTTGGCGGGAG TTTGGGCTTGCTCTC 68 37 LT409_RS03965 896773 .. 896800 + -8.4 -2.97423 ATCCGGGAAGCTCGT TCTGCGCTCTCGC GTT GCGAGGGCTC-GA TCTCCTGTTCTTCCC 55 116 cysK 898018 .. 898075 + -44.7 -4.07687 TTCGTCGTGAGAGCC CGCTGTCGCCCGAAACGGACGGTTTTT CGCG AAAAACCGTCCGTTTCGGGCGACAGCG TTTTGAGGAGGCGGT 100 81 LT409_RS03990 NONE LT409_RS03995 904119 .. 904144 + -3.2 -2.94099 GATGAGCCCGGCGAT GCCGGCGAAT CCCGGA ATTCGACGAC TCTATGATGACAAGG 42 36 LT409_RS04000 905156 .. 905171 + -4 -2.62656 GCGAAACGGGGCGAT C-TCGAG CAC CTCGACG CTTCTCGCTGACTTT 40 132 LT409_RS04005 906460 .. 906505 + -3.2 -2.78384 GGCCGCCCGCGCGTT CAGGCGGCACCAAGTAGTGTG AGAGA TACGCGTCT-GGTGATGCCTG TATAATGAAAGCGGC 41 4 LT409_RS04010 907612 .. 907640 + -14.5 -3.28712 CGCTGTCCAAGCCGT CGACGAGCGCGTC GAT GTCGCCCTCGTCG TTGTAGAACGCCAGC 83 494 LT409_RS04040 913111 .. 913121 + -2.4 -3.05463 CAGCGTATCGGGTTC CACC GAA GGAG TTGCATGAAACGGGT 41 127 crtI NONE LT409_RS04050 NONE LT409_RS04055 917180 .. 917197 + -4.8 -3.68351 GTGGTGAAAATCTCC CGGATG CTTCGT CGTCCG TTTGCCTCCTCGAGA 54 174 LT409_RS04060 918484 .. 918515 + -6.5 -2.78463 CGAATCCGCCTGCGG CTTC-CGTCGCGTC CTGAC GTCGCGACGCGGGG TATACTGAGCGGCAT 50 9 LT409_RS04065 919215 .. 919237 + -9.1 -4.08216 TCTTCGCCCTAAAAA CACGCCACA GCGCG TGAGGCGTG TTTTCGGAGCGATGA 76 61 LT409_RS04070 NONE LT409_RS04075 921081 .. 921115 + -7 -3.61398 AGCCGGCAGCTTTTC GCCTCCGCCTGACG CGCTCTT CGTCAGCCGGCGAC TTCTTCAAGCACGCG 60 14 LT409_RS04100 926153 .. 926175 + -3.3 -3.1637 GCTCGTCGACAAGCC GGCAGCGAA CACCT TGCGCTGCA TTCGTCCAGCTATCT 45 68 LT409_RS04110 928102 .. 928123 + -14.5 -2.52464 CAAAGCATGATCGCA TAACGCCCG TCGG CGGGCGTTA TGCGTTAAAGGGGGA 76 508 LT409_RS04120 930084 .. 930115 + -2.2 -4.45068 GCCTCGCAGATGCGC TTCACCGAC-ATGGC GAT GCCGTAGTAGGTGGC TTTCTTCTTCGCGAT 65 262 LT409_RS04130 932356 .. 932368 + -10.5 -2.57013 CACGTACGATCCGAC GGCGC ACC GCGCC TGCCTTCGGTTGGCA 58 432 LT409_RS04140 NONE fdhF 937287 .. 937315 + -8 -4.08317 AGGCGTAGGCTGTTG GGGGAGGGGCGC CCGTC GCATCCCTCCCG TTTCATTTCCAATTC 71 33 LT409_RS04150 938454 .. 938485 + -22.4 -3.22298 TCGACCCGATGCGTC GAAGGCCTCGCTGC GCCC GCGGCGAGGCCTTC TTCATGCTAGATCAA 100 48 LT409_RS04160 939732 .. 939757 + -6.1 -3.60627 GGGCGAACAGGATCC CGAACGTTGCCG CGA CGGC-GCGTTCC TTTCCGATGAGATCG 57 63 LT409_RS04170 942326 .. 942345 + -6.4 -3.5764 CCTAGCGAATCGAAG CCCATCTG CTCG CAGATGGA TTTCAACATGCACTT 59 139 LT409_RS04185 946429 .. 946454 + -4.5 -3.55622 ACGTGCGGGATGCGG GCGCGGCGCGC GAGG GTGAGGTGCGC TTTGAAGGGCTTGGC 51 179 LT409_RS04210 951046 .. 951068 + -6.2 -3.59252 TGACGAGGTATCGTT CGGCAGGCGG TTC TCGTTTGTCG TGTTGTTTGGTGAAG 57 223 LT409_RS04215 952330 .. 952342 + -4.1 -2.83403 GTACTGGTGGGGGGG GGTAC GCC GTATC GTTTACTCGCACGCA 41 180 LT409_RS04220 NONE LT409_RS04225 NONE LT409_RS04230 NONE LT409_RS04235 958725 .. 958765 + -7 -3.81259 ATATCAACTAATCCC GCTTCCATGGCGTC ATAACCGAAAGGA GATGTCATGGAAGC TTTCATCAATTATCT 63 30 LT409_RS04240 959868 .. 959881 + -3.8 -3.07307 GAATGTCACCATTTT GAGG CCTAAC CCTC TTACATAGCCCTTTG 45 335 LT409_RS04285 971556 .. 971576 + -6.1 -3.73106 GCACCCCCTTCCCAC TCGGACAAA AAG TGTGTCCGG TTATTGACGTTTTCC 60 61 LT409_RS04290 972796 .. 972808 + -4.7 -2.92114 ACTTTTTGTCCTATA GGCCC CTC GAGCC GTTTGGTATACTCTC 45 58 LT409_RS04295 974596 .. 974627 + -13.1 -2.82681 GACCTTGATGTTAAA GCCATCTCTCTCT GGCAAA AGAGGGGGATGGC TGCTCTCTTTAATAT 69 283 LT409_RS04355 NONE LT409_RS04360 NONE LT409_RS04365 NONE LT409_RS04370 993926 .. 993936 + -8.2 -2.60555 GCGAAAGGGACAGGC GCCG GCT CGGC TAGCTTGTGCGCTTC 52 12 LT409_RS04375 994684 .. 994701 + -14.1 -4.14243 CGAATAGGGACAACC GGGGCGC GAAT GCGCCCC TTTTCAACTCGACTG 95 34 LT409_RS04380 NONE LT409_RS04385 NONE LT409_RS04390 NONE LT409_RS04395 NONE LT409_RS04400 NONE LT409_RS04405 NONE LT409_RS04410 NONE LT409_RS04415 NONE LT409_RS04420 NONE LT409_RS04425 NONE LT409_RS04430 1007857 .. 1007888 + -17.4 -3.14468 CGAATATGGCCCTTC GACCCCTTGCCG CTATATCT CGGCAAGGGGTC TTGCATGTGGTGAGA 89 135 LT409_RS04435 NONE LT409_RS04440 1009813 .. 1009834 + -17.3 -3.32844 AGATGCCAAGAAGAA GAGGCGGGC AATT GCCCGCCTC TTCTCACATCACCCA 93 39 LT409_RS04475 1015999 .. 1016019 + -6.7 -3.2963 CGGGCCCGAACGGAA CCACGTCCG CCG CGTACGGGG TTATCGCCGCCTCCT 54 414 LT409_RS04505 1019957 .. 1019982 + -19.1 -3.40052 AGATGTAAAAAGAAA GCCCTCGAACC AGAG GGTTCGAGGGC TGTTATTCCCACTAT 95 451 LT409_RS04520 NONE LT409_RS04525 NONE LT409_RS04530 1025331 .. 1025376 + -23.3 -3.15249 ACAACGCGTCCCGAC GTCCCTGCCCTGCCGTCTCGC GCGC GATAGGCGGCGGGGCAGGGAC TTCATACCGCCTATC 100 150 LT409_RS04540 NONE aroF 1027728 .. 1027766 + -16.1 -4.39002 ATCGTGTAAAGAATC GGG-CGCGTCCGACGG CCTGAAAA CCGTCGGATGCGTCCC TTTTGTAAAAACTTT 100 32 LT409_RS04550 1029605 .. 1029641 + -10.8 -3.57144 GCTGGCCGAGGCGCT CGCGTAGCGGTCCGCGC GCTT GCGCAGATTGC-GCGCG TTTGCCCGTCGCCGG 73 19 LT409_RS04555 1032169 .. 1032205 + -21 -4.19371 GTCAAGATCGGCTAG CG-CGAAGCCCGCATCG GACA CGGTGCGGGCTTCGTCG TTTCTTCGCGGTTTC 100 26 LT409_RS04560 1033538 .. 1033565 + -14.2 -3.0263 TTGCGCGTCAAATGC GGGAGTCAGAAC GAAT GTCCTGACTCCC TATTCGGCGCATGAT 76 358 LT409_RS04570 1037362 .. 1037385 + -14.6 -3.72576 GAACCGAGAGACGAG GAAGCCGTGG AACG CCGCGGCTTC TTTGCTGAGGGGGCC 89 68 LT409_RS04580 1038984 .. 1038997 + -2.3 -3.28712 CGGTGAAGGTGTCGG CCAGC GTGC GCTCG TTGTCGCGGCACACC 44 356 LT409_RS04590 1040631 .. 1040643 + -3.3 -3.53811 TCGGTCCGGAAAGCC CGTTC TCC GATCG TTTCGCCCGCGTGCA 49 123 LT409_RS04615 1046870 .. 1046884 + -3.4 -4.07885 GAAGTGGCGAGAAAT CGCCGG ATA CGGGTG TTTTCGGCCCGCATC 59 171 LT409_RS04620 NONE LT409_RS04625 1048010 .. 1048041 + -2.8 -4.3467 GAGGGGCGATGGTAG AGTTCACCTTCGCG TCTC CGAGGAGGCGAGCG TTTTCGTGTGCGCAT 63 157 rpsL NONE rpsG NONE fusA NONE rpsJ NONE rplC 1052192 .. 1052213 + -4.3 -2.73483 CGGCGGCAAGAACGG CGTCGTTCG CGTC CGCATGGCG TAGTTGAAGTAACCT 43 1 rplD 1052846 .. 1052862 + -4.3 -3.09516 GGCCGACGCCCTGAA GCGCATC GAG GAGGTGC TTGCATAATGAAGGA 46 1 rplW 1053175 .. 1053200 + -19.7 -5.4505 TCCACGTGCTGCCTC GGCGCCCCTGC AATC GCGGGGGCGCC TTTTTTGTTGGAGGA 100 49 LT409_RS04675 1056153 .. 1056181 + -21.8 -3.96327 CCAAGCGAACGCGAA GCCGCCGCAAGC ACGAA GCTTGCGGCGGC TTTCTCATGCGGGGT 100 53 LT409_RS04680 1058420 .. 1058450 + -4.5 -3.05596 TGGATCGACGAGGAG GTGCGTCATGCGG GATAG CAGCCTGCCGCGC TTCGCTGCGCGCATC 46 8 LT409_RS04685 1060577 .. 1060605 + -21.8 -3.96148 GCTGGTGAACGCGAA GCCGCCGCAAGC ACGAA GCTTGCGGCGGC TTTCTCATGCGGGAG 100 97 LT409_RS04695 1063644 .. 1063664 + -4.6 -2.87344 TCGGAGTTGATCGCG CCG-CGCCG CTTC CGTCGTCGG TCTCTGACGAGGGTG 45 31 ruvC NONE ruvA 1065015 .. 1065029 + -10 -3.17714 CTCCAAGCCCTCCTC GCGTAC GAA GTACGC TTCGTCGGGCTTTCA 65 74 ruvB NONE LT409_RS04715 1066860 .. 1066882 + -4 -3.02511 AGCGTATAGTAAGCA TGTGCCCTCG AGG TGAGGGCGAG TGTTGCGGCCATGCA 43 112 LT409_RS04720 1067177 .. 1067199 + -17.8 -5.17353 TATAGAATGCTGAAA TGACCCCGCA AAG TGCGGGGTCA TTTTTTAATGCGTAT 100 52 LT409_RS04725 NONE LT409_RS04730 1069464 .. 1069522 + -12.3 -2.71712 CATGCTCAGCCTTTG AGCTGC-CCTTTGCCCATCCCGGCGCTC CCTC GGGCGCCGGGATGGGCGCATCCGCACCC GTTTACCCAAGGACC 69 62 LT409_RS04735 NONE LT409_RS04740 NONE LT409_RS04745 NONE LT409_RS04750 1077541 .. 1077561 + -3.2 -3.55444 GCGCGGTGACGGCGC CCGCCTCGG GGTT CC-AGGCGC TTTCCAGGCTGCGCA 49 325 LT409_RS04775 1080891 .. 1080902 + -2.2 -2.78813 CCGCGCGATCGGAGG GCTA GCCA TGGC GTTGTTCGACTGCGA 39 21 tgt 1082051 .. 1082081 + -9 -3.14132 ACTACTAGCGCCGTT CGCT-CGTCGCAG GATCGA CTGCGCCGCAGCG TTCGTGAGAGAGCGC 61 33 LT409_RS04800 1086701 .. 1086752 + -12.1 -4.24326 GAAGGCTGAGAACCA TCCCGGCGCCTGCGCGCAACCTG CGTTTC TAATTCGCGCGCAGTCGCCGGGC TTTTCCCTGATCTTT 95 32 secD 1089600 .. 1089621 + -18.7 -4.26188 AGAAGTAAAGCCGAA CGGCCCCGG ATCC CCGGGGCCG TTTTCGATCTCTACC 100 33 LT409_RS04815 1093155 .. 1093178 + -5.2 -3.01712 GCGTTGGCGACGGCT CTCGGAGGGT GTGC GCCCTCTCAG TCTTCGAGCGACGCG 46 111 LT409_RS04820 1093578 .. 1093605 + -18.4 -4.18018 AGCGCCTGGCGCGAG TAGCGGCCCCGG ATCC CCGGGGCCGCTC TTTTGCATGAAGGGC 100 80 LT409_RS04830 1095874 .. 1095896 + -5.7 -4.25104 CTTGTTTTATTGACG GTCTGTAAAC TATA GTTTAC-GAC TTTTCCTCCCGCCGG 68 313 LT409_RS04870 NONE LT409_RS04875 1102597 .. 1102607 + -8.2 -3.24747 TGCGAAAGTACCTCT GCCG AAA CGGC TTCGTCGTGTGCCGG 57 170 LT409_RS04880 1104157 .. 1104186 + -22.9 -3.75153 GCGAGGGTGCGGCGA GGGCCCCGGCATC GAAA GGTGCCGGGGCCC TTTGCGTTCGGGGGC 100 65 LT409_RS04885 NONE LT409_RS04890 1107437 .. 1107451 + -3.6 -4.05788 AGCTTTCGTGGAAAC TATGTT CGA AACATG TTTGATTTGCGCAAG 59 62 LT409_RS04895 NONE LT409_RS04900 1108851 .. 1108892 + -10 -3.09671 AGTACACGCGCAGAC CTGCGGCCGCCGCCCG CATCGCCAAC CCGACGGCGGCCGTGG TCTTGCCCTTGCCGT 63 450 LT409_RS04915 NONE LT409_RS04920 NONE LT409_RS04925 1113242 .. 1113280 + -27.4 -5.16132 TGCGTAGCGAATACG GGCTGCGCGGCCCCCTCG AAT CGCGAGGGCCGCGCAGCC TTTTGTTTTGCTGTC 100 290 LT409_RS04930 NONE LT409_RS04935 1116398 .. 1116417 + -4.8 -2.62184 CGATCTTCCAAACGG TGCACGCC TAGG GGCGCGCC TCGTATGAAGCGCAC 43 142 LT409_RS04940 NONE LT409_RS04945 NONE LT409_RS04950 NONE LT409_RS04955 1120347 .. 1120378 + -5.7 -4.56597 CGCGAATCGGTGGCG CAGGGCGCATTGG AGATTA CCAAACCGCCCCG TTTTTACCGACACGG 74 239 LT409_RS04960 NONE glpK NONE rpiB 1123628 .. 1123640 + -10.5 -2.80113 GCCCGCACGCGCGCA GCGCG GAT CGCGC TGTGCTAGCATGATC 61 40 LT409_RS04975 NONE upp NONE LT409_RS04985 1126381 .. 1126397 + -2.2 -3.41051 TAACCCTGCCGTCAG CCGAAC GTGAA GTTCCG TTATCATACGAGTCG 44 298 LT409_RS04990 NONE atpB 1127581 .. 1127605 + -3.4 -2.99837 TTTCCGAAAGGGGAG GGCGCACGCGC CTGC GCGCG-GCAAC GTTTGGTGTTTGACC 43 56 atpE 1127922 .. 1127951 + -3.5 -3.05816 TCATCGTGTAACTAA GCCTCATTCGG ATACCGTG CCGTATAAGGC TTACATAGGAGGTAA 43 30 atpF NONE atpH NONE atpA NONE atpG NONE atpD NONE atpC 1133592 .. 1133618 + -18.1 -5.04385 TGACGAGCAAGATGT GGAAGAGCCCC CGCAC GGGGCTCTTCC TTTTTTCCGGCTATG 100 106 LT409_RS05035 1136310 .. 1136336 + -16.6 -3.50832 GCCTCTACCGGCGCC CTGCGGGAGTCT GTC GGGCTCCCGCAG TCTTTCGGTTTGGGC 100 356 LT409_RS05040 1137102 .. 1137158 + -5.1 -3.1512 GTCTCGTAAGCGGCG GATCG--AGCGCTGCGAACGCCGCCTGC TGCT GCGGGCGGCGTTCGC-GCAAAAACCATC GTTTGTTCGCTGTTT 48 32 dnaE 1140861 .. 1140897 + -16 -4.01888 AAACAATTTGGCAAG CGGATAGCGCCCCCTCT TCGC AGAGGGGGCG-TGTTCG TTTATGATGTCGGCT 100 169 truA NONE LT409_RS05055 1142592 .. 1142615 + -18.2 -3.51232 CTCGCCTAGCGAACG CGAAGGGCCC CGTA GGGCCCTTCG TTCGTTTACGCCGCC 100 32 LT409_RS05065 1146495 .. 1146518 + -19.6 -4.05788 TACGAGGCATTCGCG CGGAGCGCCC TTCG GGGCGCTCCG TTTCGTTTCGGGCGC 100 53 ychF 1148631 .. 1148658 + -17.1 -4.56597 TGTAAGGAATTCGTT CCGAACCCCCT TTGAAC AGGGGGTTCGG TTTTTAACGGAAACG 100 36 LT409_RS05080 NONE LT409_RS05085 NONE LT409_RS05090 1153735 .. 1153761 + -12.9 -2.71712 GACGCTAAGCGCGAC GCGCCGCTCCG GCGAG CGCGGCGGCGC CTTTGCCCCAACCGA 69 111 LT409_RS05095 1155107 .. 1155127 + -4.7 -3.35015 CAAAAGCATTGACTC TTGTCACGT GAC GCGTTACAA TTCTGCCATGATTAA 49 29 LT409_RS05100 NONE LT409_RS05105 1155768 .. 1155798 + -9.6 -3.55801 CGTGACCCGCGCGCT CCCTCTTGGCGGGC GAG GTCGGCGAGGAGGG TTTCGAAGCCTTGCT 65 55 LT409_RS05125 1161339 .. 1161354 + -6 -2.83409 CAACCGCCACACGTG GCGCGC AGGG GCACGC TATCATCGCTTCATC 46 136 LT409_RS05130 1162112 .. 1162154 + -17.1 -3.53012 GCGTAACGGCTTTGG CATGC-A-GAAGGCCCGCGGC AAC GCCGCGGGCCTTCGTTGCGCG TTTGCGCAGGAGGAA 100 35 gatC NONE gatA NONE gatB 1168726 .. 1168759 + -26.8 -3.47322 AGCTCGGGTAAGCAT GCGCGCCGCCGCCT CGGGAT AGGCGGCGGCGCGC TTCGTTCTCGTAAAG 100 30 LT409_RS05170 NONE LT409_RS05175 1170700 .. 1170740 + -26.4 -4.56597 CGACTCTCTGCGGAA G-AAGGGTCGTCCCGCTCG CAAC CGAGCGGGACGACCCTTGC TTTTTCGGAAGGCGA 100 63 LT409_RS05180 NONE LT409_RS05185 1172165 .. 1172177 + -5.5 -4.65916 TGCGGGGAATCGATA GGATG CAG CGTCC TTTTCTTAGGCTAAA 76 25 hisZ NONE hisD NONE hisC 1176586 .. 1176628 + -9.9 -2.52635 GCGAGGTCGAGGACT CGCGTACCGAA-GTA-TCCCC TAC GGGGACTTCCTTCGGGGCGCG CTTCGTCCTCGCCCT 60 121 hisB NONE hisH NONE hisA 1178999 .. 1179015 + -5 -3.17075 GAAGTACCCGCGCAG CGTCGG CACGT CCGTCG TTGCGTTAGCAACGA 48 157 hisF 1179999 .. 1180012 + -5.9 -3.33885 CTTTTCGCGCATAGA GCCTG GTTG CGGGC TTGCTCCTTTCCGTT 52 216 hisI 1180636 .. 1180646 + -2.4 -3.66556 AGTGCAGCGAGGCCC GAGG ATT CCGC TTATGTTGAGCCGTT 49 63 LT409_RS05230 1183125 .. 1183142 + -10.5 -3.64599 TCATCACGGAATCCA TGCGCGC CGTC GCGCGCG TTTCACCTGTAATAG 73 201 fsa NONE rho 1185551 .. 1185569 + -12.4 -3.12999 GAAACCACCAGGGAA CCGCATCC GTT GGGTGCGG TTCCCTGTCGCATAC 74 97 sppA NONE LT409_RS05250 1188731 .. 1188759 + -21.7 -3.75332 TTTTCGGGATGAAGA GCGCCCGTCCGCG GAA TGCGGGCGGGCGC TTTCGGTTGACAAGT 100 75 LT409_RS05255 1190859 .. 1190885 + -16.5 -4.28774 GACGCAACGTGAAAA CGCCCGCCCGC ATTTC GCGGACGGGCG TTTTCGGTTGGCTCG 100 405 LT409_RS05270 NONE rnhA 1196251 .. 1196266 + -2.5 -3.32727 GATTCCGAAGCTGCA CC-CGG CTCAC CCGAGG TTCGTATGATGTTCC 44 46 LT409_RS05280 1197533 .. 1197558 + -17.7 -3.61356 ATTCCTCAAGCGAAA GAAAACGGCCC TTCG GGGCCGTTTTC TTTCGGGTGCATGCT 100 47 LT409_RS05290 NONE LT409_RS05295 1201259 .. 1201282 + -7.4 -3.14564 CGCGTCGATGACCTG GCGGCCGATGG AGG CGATC-GCCGC TTGGTCGAACGATCG 55 418 LT409_RS05310 NONE LT409_RS05315 1204680 .. 1204715 + -13.2 -4.24002 GAATTCGCCGCATCC GCTCGCGGTTGTGGGC AACC GCGCACAACCGCGCCC TTTTGCGCTTTCCGC 100 97 rpsB NONE tsf 1206868 .. 1206886 + -3.7 -3.5121 TTTCGTTGTGATGAT GGTGGGC GCGCA GCCTCCC TGTTCTTATAATGGT 49 251 murA NONE LT409_RS05335 NONE LT409_RS05340 NONE LT409_RS05345 NONE pdxS 1211492 .. 1211513 + -7.3 -3.05596 GTGCCGAGGTGCCCC GCCTTCGCGC GAT GT-CGAAGGC TTGCGTACCGAAGTA 52 90 pdxT 1212211 .. 1212231 + -4.5 -3.59979 CGGGTCGTGAGGAGC CTCTCCTGC GTT GCCGGGGCG TTTCCAATCGCGGGA 54 31 LT409_RS05360 1212539 .. 1212565 + -22.4 -5.37043 GGGCCTTGAGTAGCG GTTCCGCCGGCA TCG TGCCGGCGGAAC TTTTTTCTATGCGGT 100 28 lgt 1213480 .. 1213518 + -13 -2.62246 TATAAGGGAATCGAA CGCACGGCTCCTCGAGGC TTC GACTCGCTAAGCCGTGCG ATTGGTTACGGTTCG 68 43 LT409_RS05370 1214044 .. 1214070 + -23 -4.56914 GTTTAGCGCATGACG CGCCCGTCCCGC TTC GCGGGGCGGGCG TTTTCGTTTGCGTCG 100 51 pyk NONE rhaD 1217255 .. 1217270 + -4.6 -3.18467 ACCATCTTCCGGTGA ACGAGG CGTT CCTCGC TTAGGTTGGGAATTT 48 6 rpmE 1217869 .. 1217891 + -17 -3.18264 AGCAAGCACAGCGAA CGGCTCGGTC GAT GACCGGGCCG TTCGTGCGTCCAGGG 89 50 LT409_RS05415 1224589 .. 1224599 + -3.2 -3.28785 TCCGAAAAACACGCT TCGT CCT GCGA TTCCGTGTTTTCGGG 47 59 LT409_RS05420 1225515 .. 1225562 + -28.7 -3.61715 ATGCCACCTTTCTGT GTCGGAGCGCGTCCCGAACGGC GATCG GCCGTTCGGGACGCGCTCT-AC TTGTTCCAAGCGATG 100 90 thyX NONE LT409_RS05435 1228680 .. 1228719 + -6.3 -2.57243 CGTAGAGCGCTCGAT CGGGGGTGCGGGCGGAAA AACGC TTGCCCCCCCC-CCCTCG CTGTTATACTCATGC 46 36 LT409_RS05440 NONE LT409_RS05445 1230756 .. 1230767 + -3 -4.07568 AAGAAAGAAGGTTGG TCAT GAAG ATGA TTTTCAAGAACAAGC 57 65 LT409_RS05450 1231738 .. 1231773 + -2.5 -2.79183 GATTCGATAGGAGGC GCGG-ACCGGTTTTGT ATGGA ACGCGACCGATTCCGC TATCGTCAAGCTCCC 39 31 LT409_RS05455 NONE LT409_RS05460 1233461 .. 1233471 + -2.4 -2.75535 GGCGAGGAAGAGGGA GGCG GGG CGCA TGCTTGACATCTTCG 39 8 LT409_RS05465 1235148 .. 1235183 + -3.8 -3.06492 GCCACGACCGACGAC GGGCGGAAGGATCGCT GATG AGCGATATCGCCGCGC TGTTCACCTGGGTCA 43 8 LT409_RS05470 1235923 .. 1235953 + -16.2 -2.87211 GCGTTCCGCCGACCG GGGCCGCCGCATG CGACAA CA-GCGGCGGCCC TATGTGCGGCAAAAT 81 121 LT409_RS05480 1237093 .. 1237107 + -4.2 -4.03234 CTAGCGCGTCCGTTT TCGCCA GCT TGGCAA TTTCTCTCGCGCGGC 61 37 LT409_RS05485 NONE mdh 1240996 .. 1241025 + -17.1 -2.70932 GCGATAGTGCGGATC GGGGGAGCGTCGC TTGG GCGGCGCTCCCCG TCGTTAAGGGAGGGG 84 150 LT409_RS05495 NONE LT409_RS05500 1243280 .. 1243301 + -2.2 -3.1506 GGTGCGGCGGGACGC CGGATGCG GGCGAG CGTATGCG TTCATGGGAAGATTT 43 260 LT409_RS05505 NONE LT409_RS05510 NONE tmk NONE holB NONE LT409_RS05525 NONE LT409_RS05530 1249939 .. 1249952 + -2.3 -2.62396 ATCTGGTTGTGAAGC TGCGG GGCA TCGCG TAGTGTACGAGGGTA 38 9 LT409_RS05535 NONE LT409_RS05540 1251943 .. 1251958 + -2.5 -3.07307 ACATGGAATTCGAAC GCATC GGGAAA GGTGC TTAGATGGAACTTTC 41 64 LT409_RS05545 1253030 .. 1253044 + -5.6 -4.15044 CTCGCGTACCGAAGT ATCCCC TGA GGGGAC TTTCTTGCAGGACGC 68 121 LT409_RS05550 1254197 .. 1254212 + -8.2 -3.53031 ATCGAAGAGGGTTGC GCGTGC GGAG GCGCGC TTGCTTTGGCATCGC 62 124 crcB 1257903 .. 1257948 + -9.1 -3.28001 GACCGGCTCGGCCGC GG-CGTAGGGGGGGCGGGCGCCG CGCA CGGCGC--GCACCCC-TACGTCC TTCGATTTCGCGCTC 63 19 LT409_RS05610 1267798 .. 1267811 + -6.7 -3.90316 CGAAAAACACGTTTT CGGAA GCGA TTCCG TGTTTTTCGAGCGAT 65 104 LT409_RS05615 1268001 .. 1268028 + -9.8 -4.3534 GCTCCACGGAACACC AGGCCACCGG CTCTTTCA CCGGTGGCCC TTTTCGTAGTTAGGG 87 35 LT409_RS05625 1271691 .. 1271706 + -7.5 -3.57144 AGCATGACGCCGACC GCGGC GACGTA GCCGC TTTGCCGGTGGGACG 63 433 LT409_RS05635 NONE LT409_RS05640 1273919 .. 1273930 + -2.2 -3.14132 GACGTGGTTCTCGAA GC-GC GAG GCTGC TTGATGGCCGGGGCG 43 10 LT409_RS05645 NONE LT409_RS05650 NONE LT409_RS05655 1277020 .. 1277048 + -5.1 -3.62046 AGGAGCCGGTCGGGC CGACGGGCTACGC GGA GTAGAGCCCGTCC TTGTTGAAGCGGTAC 54 6 LT409_RS05660 NONE LT409_RS05665 1279501 .. 1279529 + -2.4 -2.64616 TTCGGCGCGAGCTTC GGAGGCG-ACG ATGCATGA CGTTCGCCTGC TGCTGTGGCTGAGAG 38 8 LT409_RS05670 1281112 .. 1281166 + -9.7 -2.57132 TTCGGCCGACGACGA CCCTCCG-AGCCGTTCGCGCGCGCCG AGGT CGTCGAGCGCGATCAGCGGCGGGGCG CTTCTCGCCCAACGC 56 118 LT409_RS05680 1282971 .. 1283024 + -13.8 -3.59698 GCGCGCTCGTCGCTT CCGTGCAACCCTGCGGTTCTGCCG CCTTTC CGGTGCGACCGTAGGGCTGCACGC TTATATATCACCTGA 88 41 LT409_RS05685 1284741 .. 1284751 + -6.8 -4.21194 CGGACGGCGGGAAGG CCGT GCG ACGG TTTTCGGTCGTGAGA 71 260 LT409_RS05690 1285311 .. 1285329 + -3 -3.72893 AGTTCCGCCTTCGCG CGTTTGCC CAG GTCGGACG TTTCATCAGAAAATG 52 162 LT409_RS05695 NONE LT409_RS05700 NONE LT409_RS05705 NONE LT409_RS05710 1289717 .. 1289728 + -2.2 -4.10164 ACATGGTGTAGAAAA G-CGG CTG CCGTC TTTCTATCGTCCTAC 57 30 LT409_RS05715 1290655 .. 1290688 + -16.8 -3.14564 GGTGCATATCTCGGC GCGCGTCTTCGTGT CGGTGA ACACGATGACGCGC TTGCTGCCGCGCTGC 85 515 LT409_RS05745 NONE LT409_RS05750 1299444 .. 1299460 + -8.7 -2.62184 CGAGGCGCGGCGCAG CGACTTC AAC GAGGTCG TGCTGTGAGCGCGCC 56 1 LT409_RS05755 NONE LT409_RS05760 1301164 .. 1301198 + -19.4 -3.55203 TTTTGTAGGGAGGCG ACGGCCTGAAAGGGGA TGG TTCCCTTTCAGGCCGC TTTACGAAGCGTTTT 100 33 LT409_RS05765 1302676 .. 1302686 + -6.8 -3.20382 GGCATCGAGCTCGTC CGCA TTC TGCG TTGATCGCTCTGCAC 54 11 LT409_RS05770 NONE LT409_RS05775 1305147 .. 1305173 + -13 -3.64703 GATCAGGTAAAAAAA GAACCCGATGCG TCA TGCACCGGGTTC TTTACCTGCAGGAAA 82 447 LT409_RS05785 1308198 .. 1308220 + -18.4 -5.00884 AGTCGATATGCGAAA GCGGCGGGCC TCC GGCCCGTCGC TTTTTTGCGCCCGGT 100 53 LT409_RS05795 1310823 .. 1310862 + -15.9 -3.85698 TCCTCCCGAACGTTC GAAAGCCCTGGAACGC-CG ACAC CGTGCG-TCCGGGGCTTTC TTTATGGCGGGGAAG 95 49 larB NONE LT409_RS05805 1312266 .. 1312312 + -18 -3.16935 CCTCCACTTCGTGCA GCGCTACGACGCGTAGCAAC CCGCTCC GCCGCTCCGCGTCGTAGCGC TTCGTCAGAGTGTTT 90 10 LT409_RS05830 1321276 .. 1321313 + -12.8 -3.05384 CGCCCGGTCATGAAA AAGCCTCCCATTTCTC ATGTCC GAGAAATGGGAGGCGG TTCGATCGCGCGGGG 72 60 LT409_RS05860 1329355 .. 1329395 + -15.5 -2.7044 GCGCGCGCCCTGCGG GC-TTCGGGTCCCGCAGC CTATGC GTTGCGGGACCCGGGTGC TACTATGGTTCCATG 79 41 LT409_RS05865 NONE fetB NONE LT409_RS05875 NONE LT409_RS05880 NONE LT409_RS05885 1333245 .. 1333269 + -19.3 -4.65933 ATCATTAGGCAATCG GGCCTGCCGCG TCG TGCGGCAGGCC TTTCTTTTCCGGCTG 100 33 LT409_RS05890 NONE LT409_RS05895 1335289 .. 1335303 + -5.6 -3.14211 ATCTCGGGCACCGCA GCCAGC CTC GCTGAC TTACTACGCCAACCT 50 146 LT409_RS05900 1335677 .. 1335704 + -25.6 -4.11394 GCGATTGGCGGTTGA GCGGCGGCCCCG AAGA CGGGGCCGCCGC TTTTCCGGATCGGCT 100 40 infC NONE rpmI NONE rplT 1337873 .. 1337901 + -21 -3.90112 GTCTATGCAAAAACA GCGCCCCGTCGG ATAAG CCGGCGGGGCGC TTTCGTTAGGGGAGG 100 48 LT409_RS05930 NONE LT409_RS05935 1341670 .. 1341686 + -5 -3.35679 TATGCTGATCGAACG CGACCC CCGTC GGGCCG TTGTCGATGGGAAAG 49 33 LT409_RS05940 1342247 .. 1342265 + -8 -3.9243 GCGGTTCGGCGGGGC GCCCTTCG ACG CGGCGGGC TTCTTTGAGGGCTTG 67 289 LT409_RS05965 NONE LT409_RS05970 1353171 .. 1353184 + -5.2 -3.55622 TATTGTCAACACCCG CGCC CCTCGA GGCG TTTCCGGGGCTTACG 52 267 LT409_RS05980 NONE LT409_RS05985 1357413 .. 1357439 + -15.9 -3.11281 ACCGACAATAAAAAA CGAGGCCGGGA ACGGA TTCCGGCCTCG TGTCGTTTTACCTGG 83 397 rlmD NONE dcd 1359593 .. 1359623 + -16.8 -2.52516 CGCTCGTCTTATCGC GGCTGCGCGTAGCG CTT CGCCACTCGCAGCC CTTCCTCATGCAGCG 83 80 LT409_RS06010 NONE LT409_RS06015 NONE LT409_RS06020 NONE LT409_RS06025 NONE LT409_RS06030 NONE LT409_RS06035 1369577 .. 1369594 + -11.3 -3.01712 GGTAGAAAGAGGGCT CGCATCC TCGT GGATGCG TGTTCAAAAAAGAGG 68 36 LT409_RS06040 NONE LT409_RS06045 1371779 .. 1371790 + -7.2 -4.93296 CAGAACTGACAAAAG CGGC ATAC GCCG TTTTTGTCATCCTGA 88 32 ndk 1372379 .. 1372419 + -15.5 -5.93252 AAAGCACGTTCCGAG CGCGCCGCCGCGTACGAGC CTTTC GCTCG-A-GCGACGGCGCG TTTTTTGTTTTTCGG 100 39 LT409_RS06055 NONE LT409_RS06060 NONE LT409_RS06065 NONE LT409_RS06070 1376580 .. 1376606 + -16.6 -5.58454 CCCTTATGATGGAAA GGCTGGGATCCG TTA CGGGTTCCAGCC TTTTTTTGGTCTGAG 100 73 LT409_RS06075 1377849 .. 1377868 + -7.8 -3.44229 TTTCCAACAGAGAAG CTCGGTGT TTCT GCGCCGAG TTCTGCTCGTCGCAT 62 70 mreC NONE mreD 1379209 .. 1379231 + -4.8 -3.62096 ACCGCGGACCGCGCA CGCCCC GGCTGCGATAG GGGGCG TTTGCCGTGATCGCC 54 9 mrdA NONE rodA NONE LT409_RS06100 1383817 .. 1383828 + -2.2 -2.87683 AAGAAGGGAAACGAG TTCG ATGA CGGA TCTCTGGCCGCGTCT 40 62 LT409_RS06105 NONE LT409_RS06110 1386552 .. 1386569 + -14.1 -4.21142 TCGAGCAAGAAAAAA GCCCGCC GATC GGCGGGC TTTCTGTATTCAGAT 100 71 LT409_RS06125 1387523 .. 1387541 + -3 -3.15999 CCGCGCGGAAGGAGA TGAGGCGC CGT GCGCATAA TTCGCTATCTGAAGA 43 7 LT409_RS06130 NONE LT409_RS06135 NONE LT409_RS06140 1392323 .. 1392358 + -4.7 -3.45404 AAGGGCTGGGAGATC CTCGACTGGTA-GAGC CTTGC GCTCATACCCTTCGGG TTGCTTACGTTTTGG 52 14 LT409_RS06145 NONE LT409_RS06150 NONE LT409_RS06155 1395472 .. 1395488 + -2.2 -3.94634 CCTGACGGGGCCCGC TGCGGC GGGAG GTTGCA TTCTTTGCCCTCCTC 54 36 LT409_RS06160 1396742 .. 1396756 + -4.2 -4.36729 CTAGAAGCCGGACGA GACGTA GAC TCCGTC TTTTACCTTCTTCGT 68 37 LT409_RS06170 NONE LT409_RS06175 NONE LT409_RS06180 1401721 .. 1401740 + -15 -3.60098 TCGGCACTGACGAAA GGACCCGG GAAA CCGGGTCC TTTCACGTCCGGAGT 90 51 LT409_RS06190 NONE LT409_RS06195 1403703 .. 1403716 + -2.3 -2.77899 ACGCGCGGTTGAACG CTTCC CGGT GGATG TCCTTGATGAACAGG 38 261 LT409_RS06205 1406079 .. 1406114 + -9.1 -4.36914 ACATCCCTTGAAAAA CTAGCGATCGTTAGT TAATAT ACTAGCAGTCGCTAG TTTTGTAGAGGAGAG 82 261 LT409_RS06210 NONE LT409_RS06215 1407319 .. 1407367 + -9.7 -3.02263 GGTGCCGGCGGGAAG CGCGGAT--CGCGCATGAACGCGG CGCG CCGCAT-CGTGCGCGCCATCTGCG TGTTCAACGGGGTGT 60 10 LT409_RS06220 1407748 .. 1407770 + -18.4 -3.14931 GCGGCGGTGATGCGT CCCGCGCGCT AGC GGCGCGCGGG TTCGTGCCGCATGAG 90 14 LT409_RS06250 1414255 .. 1414296 + -3.5 -4.18018 TCTGGAGCGTAGCGC CCAGGAAGCGCGATTGTTC TGCT GAGCGCTGGCGTCGCCTGG TTTTGGCTGCGAGCC 62 1 LT409_RS06255 1415930 .. 1415952 + -3.3 -3.01791 TTCCGTGACGCGCCC TGATCGCAG AACTC CCGCGATCC TCTTCGAAAGCGCGT 43 133 LT409_RS06260 1417655 .. 1417669 + -2.7 -3.78775 CGAAAACCCGGCCGC AGCGG CAAAA CCGCA TTTCGTGCTCAAACC 52 123 LT409_RS06280 1421017 .. 1421039 + -7.6 -3.34043 TCTCCTTCATGGTGC GCTGTCGGGC GTC GCGCGAGAGC TTATCGGATGGTAGA 59 462 mfd NONE LT409_RS06290 1425898 .. 1425924 + -11.4 -3.04322 GCCGCAGATGACGAA GGCGATGCCCGC GAC GAGGGCGGCGCC TCTTCCCACGTTGAG 65 286 LT409_RS06305 1428166 .. 1428212 + -10.1 -2.73483 GCCGAAGTCGAAGGA TCCCGTGCGGCGATAGCTG-GA AGTC TCACGGTTGGCGCCGCGCGCGA TCCTTCGACTGCGCT 61 74 LT409_RS06310 NONE LT409_RS06315 1430337 .. 1430355 + -12.4 -3.04248 GAAGCTGATGGAAGA GTCCACCG ACA CGGTGGGC TCTTCGCCGATGTTG 68 230 metK 1442617 .. 1442655 + -23.3 -2.73771 CTGCAGAGGCATGTG GCG-AACCGCCCGTTGCG ATCG CGCAGCGGGCGGTTTCGC GTTTGCGGCGTGTGG 100 48 priA 1446153 .. 1446187 + -9.3 -2.7035 GTCGGTGTTCTCCAG C-G-CCAGCGTCACGGG CGC CCCGTCGCGCTGGACCG TGATGTCTGCCTGCG 56 365 LT409_RS06380 1449986 .. 1450000 + -3.5 -2.96216 ATTTGGCTGTATCTT TGCGC CTGGT GCGTA TGTATACTCATGCCC 42 131 rpoD 1451451 .. 1451469 + -7.4 -2.91264 GCCAACCTGCGGCAT GCGAAGAT TGG ATCTGCGC TGTATGGATAACGAA 51 200 rlmKL 1454001 .. 1454024 + -11.7 -4.30809 TTTTCGTCATTTTCA GCCCGATGC GCTGCA GCGTCGGGC TTTTGCTCGGTCTTA 93 247 LT409_RS06395 NONE LT409_RS06400 NONE LT409_RS06405 NONE LT409_RS06410 1455961 .. 1455988 + -15.6 -3.94846 CCGCCGCATAAAAAA CCGGTTGCGCGA GTCG TAGCGCAACCGG TTTCGATTTTCCTGG 95 60 LT409_RS06420 1456322 .. 1456339 + -11.3 -4.82667 ACCATGAATTCAAAA GCCTTCC TTTC GGAAGGC TTTTTCATATCCTCA 100 37 trpS 1458152 .. 1458163 + -4.4 -4.25615 ATGAGGTAAGAGAAG CCAT GAAC ATGG TTTATTAGACTTTTT 65 6 LT409_RS06435 1458383 .. 1458407 + -12.2 -5.8187 GCCAGAATTTAACGG CAGGCCAGAC GAACA GTCTGGTCTG TTTTTTTATTCCGTC 100 37 LT409_RS06440 1458876 .. 1458893 + -14.1 -5.81412 CATGAACGAGCAAAA GCGGCCC TTAG GGGCCGC TTTTTTTTGCATGCA 100 52 LT409_RS06450 1459990 .. 1460001 + -7.2 -3.67112 TGGAGAAGCTGTTTC GCCG CAGG CGGC TTCTTCCGGTATCAT 60 89 LT409_RS06455 1462146 .. 1462158 + -3.3 -2.74792 GAGGCAGGCGGAGCA GCTGT GAC GCGGC CTTTGAACATCGTGC 41 19 LT409_RS06460 1462689 .. 1462699 + -4.6 -3.00298 AAAGCGCGCGGAGGA CGTG GAA CGCG TGTATACTTGACCGC 46 95 serC 1463854 .. 1463882 + -26.1 -2.71364 CCGCCTGCGATCGAC GAAGCGCCCGGCC GTC GGCCGGGCGCTTC TCATTGGGGCGATGG 100 51 LT409_RS06475 NONE LT409_RS06480 NONE scpB 1467393 .. 1467418 + -12.5 -3.56987 CGCTTGGTGGGCACC GCCGC-CGGCGC CGA GCGCCGTGCGTC TTGTGTCGTCGTCTC 82 108 LT409_RS06490 NONE LT409_RS06495 NONE aroA NONE cmk 1471565 .. 1471579 + -3.4 -3.14602 CTCGCCCGCGAGAAG GGCGCG CGA TGAGCC TGTTCCTCCCGTACG 45 14 LT409_RS06510 NONE ispH NONE LT409_RS06520 NONE der NONE plsY NONE LT409_RS06535 1478023 .. 1478055 + -14.9 -5.00884 TGTGCGCACTGCATA GCCTCCCTCGGGT CCCCCCA ACCCAAGGGAGGC TTTTTTACGCCCGCT 100 273 rpe NONE LT409_RS06555 NONE LT409_RS06560 NONE LT409_RS06565 1484520 .. 1484537 + -10.5 -2.52464 GTATAATGCTAAGGA GCGTCGC AGCG GCGGCGC TCCGTTCGAACAAAG 60 35 LT409_RS06570 1485328 .. 1485343 + -11.8 -4.23758 AGAGAACGACAAAAA GCCCGC GCGA GCGGGC TTTTCAATGTCGGCT 89 74 LT409_RS06580 NONE LT409_RS06585 NONE LT409_RS06590 NONE rsmD NONE coaD 1491189 .. 1491205 + -2.2 -3.59979 ACGCGTAGAAACTGC CCGTTA GCAGG TCACGG TTTCGCGTCGGCGCG 49 33 LT409_RS06605 1491826 .. 1491877 + -4.2 -3.05384 GAACGCCAATTCTTT GGCCTCGGGGCGCTAAATGGACGCG CTC CGCATCCAGGT-GCCCCACGAGCTC TTCGCTCCGGCGGAG 46 10 LT409_RS06610 1492412 .. 1492439 + -18.5 -6.72663 TAGCTTCGCACGACC GAACGCCCGCC CTTCAC GGCGGGCGTTC TTTTTTTTTTTCTCT 100 38 LT409_RS06615 NONE LT409_RS06620 NONE LT409_RS06625 1494510 .. 1494532 + -9.8 -4.56597 TCTTCGCTCCGAAAA CACGCTCCAG ATG CTGAGGCGTG TTTTTCGGGCGAAGA 89 70 LT409_RS06630 1496036 .. 1496047 + -7.2 -3.53012 AGAACGAGCGGCAAC CGCG GCGC CGCG TTTACGCGAAGCCCG 58 50 LT409_RS06635 1498076 .. 1498088 + -3.3 -3.63251 TGCGGGTGATCGGGG CTTGC GGC GCGGG TTCTCGTTTGGTACT 51 63 rpmF 1498402 .. 1498444 + -17.7 -4.72029 GCCGCGCATTGACAA GCCTCCTCGCACATCGCGC TTCGC GTGCGATGCGCCGGGAGGC TTTTCTTGCATTCCG 100 69 plsX NONE rnc NONE smc 1504230 .. 1504242 + -10.5 -3.62096 TGAGCTCGCACGAAA CGCCC GCT GGGCG TTTCGGCTCGTGCGG 73 94 LT409_RS06665 NONE LT409_RS06670 1505743 .. 1505762 + -6.3 -3.38224 GCAGGAGGAGGATCC GCGCCGC TGACGC GCGGCCC TATTTGGGATACACT 52 16 ftsY NONE LT409_RS06680 1507720 .. 1507742 + -4.8 -3.53811 GTATTTCTAAAGGGC GGCGTATC CGAGCGC GAGACGCC TTTCGGCGCCGTACG 52 31 LT409_RS06685 1509023 .. 1509056 + -18.5 -4.07678 TGGTTTGCTCGATGG CAATAAAGTATTCCG AATG CGGAATACTTTATTG TTTCCTGTTTTGAAA 100 95 ffh NONE LT409_RS06695 1511230 .. 1511250 + -8.1 -2.58544 CAGCTGAGGCTAGCC ACGCGCCCG GTC CGAGCGCGC CTTGTAGCCATAGCG 52 34 rpsP NONE LT409_RS06705 NONE LT409_RS06710 NONE trmD NONE lepB 1513964 .. 1513980 + -10.1 -3.54741 GGGATAGCCTCCCGC CTCTCGC GTC GCGAGGG TTTCGCCCGGTGATC 70 34 lepB NONE LT409_RS06730 NONE glyS NONE LT409_RS06740 NONE ppdK 1521496 .. 1521522 + -23.8 -3.66356 CCTCGCATGATCGAA GGGCCCGCAGCA CCG TGCTGCGGGCCC TTTCGCGTTCGGCGT 100 54 LT409_RS06775 NONE LT409_RS06780 1528670 .. 1528711 + -14.7 -5.48054 AGACGCACAGACGCA GAGCCGATAATATGCAGTTT GAA ATACTGC-TGTTATCGGCTC TTTTTTGATTTTAAT 100 57 LT409_RS06805 NONE LT409_RS06810 NONE LT409_RS06815 NONE LT409_RS06820 1539429 .. 1539466 + -17.8 -4.17762 GTAGCATGGAATCCC GGTCGCGCTTCTCCTT TCGGAC AGGGGGAAGCGCGGCC TTCTTTTAGGAAATA 100 37 mtnA NONE LT409_RS06845 1546897 .. 1546907 + -2.4 -3.19048 TTACTAGGTTCCCTC GGCC TAA GGAC ATTTCTTCGTTGCGC 43 34 LT409_RS06850 NONE LT409_RS06855 1548075 .. 1548093 + -5.3 -2.63913 GGTTTTTCCTTGCAG TACCGTT CCGTT GACGGTA TACTATCCAATCGTG 46 128 rplS 1548538 .. 1548573 + -27 -5.00616 CGCTTCAGATTTGCA GGAACCCCCGTCGTCC TTCC GGACGGCGGGGGTTCC TTTTTTACAGGGGCG 100 51 LT409_RS06865 1549496 .. 1549531 + -8.3 -4.2349 TTTCCACGCTTGCGA GCCGTTCGGC--GCGCC TTCG GGTGCAAGCTGGACGGC TTTTCCATCTGCGGC 75 78 LT409_RS06870 NONE LT409_RS06875 NONE dprA NONE LT409_RS06885 NONE LT409_RS06890 1553248 .. 1553264 + -3.6 -3.05384 TCCGGAGGCCCTGTT CGCGAT GAGCG AGCGCG TTCGGTAAGAAACGC 43 1 trmFO NONE LT409_RS06900 1555781 .. 1555796 + -3.2 -3.15544 GGTTCCCGGCCGGTT GCGG AGCTGTGA CCGC TTCCTGACGGTCGCC 45 103 LT409_RS06905 1556498 .. 1556527 + -19.3 -3.64703 CCTATAATGTTCAGA TGCCCGCG-CGCGG CCT CCGCGTCGCGGGCG TTTGGATACAAGGCG 100 117 LT409_RS06910 NONE LT409_RS06915 1557844 .. 1557872 + -10.1 -3.87075 CCCCGACGACTCCGG GGGTGCCGTGCGC GAT GAGCCCGGCAGCC TTTCTCAGGGATCGT 78 49 LT409_RS06920 1558986 .. 1559018 + -5.5 -3.39521 TGCGGCCTCCGATCA GGATG-ACGGCCTG CGGGTT CAGGCCGTGCTGCC TTGCATTTTCGTAAG 52 125 LT409_RS06925 NONE LT409_RS06930 1562195 .. 1562252 + -39.7 -3.34715 CCGCCTCCGCATGCT CGTTGTCGCCCGAAAGCCGC-GTTTTCA GCG TGAAAACAGCGGCTTTCGGGCGACAACG TGTTTCGGGGGGGTG 100 82 LT409_RS06940 1563760 .. 1563771 + -7.2 -4.75174 CAGAATCCAACCGAA CGCG CACG CGCG TTTTTCCCTTGAGTC 85 452 uvrA 1566963 .. 1566985 + -3.4 -3.53012 CCCTTTACCGCGTCG GCGGGACGT GCGACA ATG-CCCGC TTTGCAGACGGCGGA 49 104 LT409_RS06955 1568599 .. 1568631 + -2.1 -3.02263 ACCCCTTGACATGGT GTTTTGCTCGCCTGT CCAAA ACTGG-G-GCAAAAC TCTTGCAAAACATCT 41 55 LT409_RS06960 NONE LT409_RS06965 1570987 .. 1571026 + -6.3 -3.26947 CCGGAAAGGGGCGTC GTTG-TCGGGAACGCGCC GTTCG GGCGCGGTGCCGTTCAGC TTCCTGTCGAAATTC 50 71 LT409_RS06970 NONE LT409_RS06975 1573398 .. 1573410 + -6.2 -3.02144 GGGGTCGTAATCGAG GCGC TTGTC GCGC TGTTCGGCGGCCTGC 48 487 LT409_RS06985 1575410 .. 1575428 + -2.4 -3.49475 TCCCGTACGCCGTTT GCATGA CACGGAT TCGTGC TTCTATGCGCATAAA 47 55 LT409_RS06990 1575875 .. 1575916 + -20.1 -4.07568 CTCCCTCCCTCGCGC CCAGCAACCGCCCGCGGCA TCCG TGCCGCGGGCGGTTGCGCA TTTTGAGGAGGGCGG 100 75 LT409_RS06995 1577865 .. 1577876 + -2.2 -3.53012 CTCATGCAGGCGATG CG-GC ACA GCTCG TTTGAGGGCACGGCA 47 390 LT409_RS07005 NONE LT409_RS07010 NONE LT409_RS07015 1581904 .. 1581931 + -17.8 -3.90048 GACGAGGCGCCGAAC GAACGGCTCCCT TTCG GGGGAGCCGTTC TCTTTTTCGGCGGCA 100 59 LT409_RS07020 1583859 .. 1583873 + -3.4 -2.75183 CGCATCGGAAAGGAG GGCGGC TAT GCTGCG TGATTCCCTGGGCCT 41 8 LT409_RS07025 1585604 .. 1585616 + -3.3 -3.90588 GGTCGCTGGCTTCCT GACGC CTC GCTTC TTTCCTTCGGCGATG 56 24 murB 1586719 .. 1586734 + -6.2 -4.15044 CGACAAAGGAACAAA TGTTTC ACGT GAAACA TTTGTTCGCGCACGA 68 60 cydD NONE cydC 1590689 .. 1590745 + -7.7 -4.1711 GTTCGCCCAGGCTAG GCGGTTCGCGGCCAGCGCGAAGGCTTC GTC GACCGCTTCGCCCTTCTCGCGCGCCGC TTTCTTGAGGGTGCT 71 271 LT409_RS07055 1592661 .. 1592673 + -4.7 -3.12351 CCCATCCTGCGACCT GCCGC CGC GCCGC TTCCCTGTGGGCGCG 46 52 ettA 1594911 .. 1594938 + -9.2 -3.14132 GTCGTCCCACACAAG CGAAT-CGGCATC GAC GATGCCGAATACG TTCATGAACGAGCAG 60 520 thrH 1597583 .. 1597605 + -10.4 -4.08216 TGGCTTAACTGCGTT CGCCGTCGCC TGC GGCATCGGCG TTTTCGCGCAGGTGC 80 33 LT409_RS07090 1599814 .. 1599835 + -15.1 -4.26881 TGGCGTTGCACGTGG GGGGCGGGC TTCG GCTCGCCCC TTTCCTTTTGTCGCG 100 55 LT409_RS07095 NONE brnQ 1602296 .. 1602318 + -4.1 -3.43042 CGCGACGGGCGTGAG CGCC-CGACT CCGG ATTCGTGGCG GTTTTTCCTACAACC 49 27 LT409_RS07115 1606918 .. 1606958 + -27.8 -3.02511 TTTCCCTGCAGGGCT C-CGGAACGGGCCCGGAAC GGTT GTTCCGGGCCCGTTCCGCG TCTTGGAGCGGTCGG 100 75 LT409_RS07120 NONE LT409_RS07125 NONE LT409_RS07130 NONE LT409_RS07135 1609870 .. 1609885 + -8.2 -2.57132 GCTCGTGTTCTAGTT CGCCGT TGCG GCGGCG CTTCTGGCCGCGGCC 52 28 LT409_RS07140 1610861 .. 1610871 + -5.4 -3.39618 TAGTGCTGCTGCGGC GAAG AGG CTTC CTTTTTGGCGTTGCG 52 43 LT409_RS07145 1612236 .. 1612262 + -25.2 -3.36823 ACAAGGTCTCTTCCT GCGGCCCCGACG ACA CGTCGGGGCCGC TTCCGTTTTCGGACG 100 67 LT409_RS07155 NONE LT409_RS07160 1619178 .. 1619211 + -18.1 -3.81 GCCTGCGGCTTCCTT GTCAAGCCCCGGCGG TGCG CCCCCGGGGCTTGCC TTCTTGTGGCATAAT 100 42 LT409_RS07165 1621077 .. 1621113 + -5.6 -3.18383 GGGGCGTCCTTGCGC GGGCCG-CCGCGCGCCG TGCG CTTCGCGCGGTCAACCC TTCGTCAATGAGCGT 50 53 LT409_RS07170 NONE LT409_RS07175 NONE LT409_RS07180 1624706 .. 1624731 + -4.5 -3.61398 CCAACCCCAGCTCGT GCAGCGTGTCC AGAC GGGCGCGCGCC TTCTTCAAGCCGGAC 53 470 LT409_RS07190 1628744 .. 1628776 + -8.4 -3.57144 TCTTGAGCCGCTACC GGCAAGCGTGAGGGC GCGC GCCTACGC-CTTGCC TTTCACCATGGACAG 64 15 LT409_RS07200 1631429 .. 1631444 + -6 -2.63596 CTTCACGGCATTCGA GCCCGC TCGG GCGGGA TAGTATAGAATGAGC 46 113 LT409_RS07205 1633504 .. 1633525 + -2.3 -3.14126 ACGGCTCAAGGTTTC GA-GAAGACA GGT TGGCTTCATC TGTTAAAATTTCTCA 43 83 LT409_RS07210 NONE LT409_RS07215 NONE LT409_RS07220 1636481 .. 1636495 + -3.4 -4.2717 CCATGTCCACGAAAC CCGCGC GGC GCATGG TTTTCATCGGCTGCT 64 173 LT409_RS07230 NONE LT409_RS07235 1640159 .. 1640179 + -4.7 -3.69323 GCCACGGCGACTCCT GCGCA-CG ATGCAA CGATGCGC TTTGCCTCGTCGTCG 58 265 LT409_RS07255 1644352 .. 1644364 + -5.5 -3.74928 GCCCTTTCAGCCGCT GGTGC GAA GCATC TTGTTCGATTGATGT 60 95 LT409_RS07260 NONE LT409_RS07265 1645195 .. 1645217 + -3.4 -3.96148 CCACTGCTACAGGGC TGATGGGGAT GTG ATCCGCATAA TTTCTGCTAGAAAGG 56 127 LT409_RS07270 1645515 .. 1645545 + -19.7 -4.27617 AAGACACCGATGTTT AGCAGCGGGCCCC TAAGC GGGGCCCGCTGCG TTTTCGTCGCATATC 100 65 LT409_RS07275 1647312 .. 1647359 + -22.2 -3.86481 CTCTCAGTAGAGATC GGATGCGGAGCACTCTTTGAGA TCAA TCTCAGAGGGTGCCCCGTATCC TTATTCTCACTTGTT 100 55 LT409_RS07300 NONE LT409_RS07305 1651743 .. 1651777 + -20 -2.50935 GCGACCGTCCTGTCG GCCCGCACGCCCCT CGCGGAA AGGGGCGCGCGGGC GTTGCTAGATCGCGT 95 42 LT409_RS07370 1663221 .. 1663235 + -7 -3.66095 GAGCGAAGCCGCGAT CCCCCC GGA GGGGCG TTTGCGTGAAGGTTT 60 42 LT409_RS07375 NONE LT409_RS07380 1665646 .. 1665672 + -13.6 -3.54424 TGCCGAGGGATGTCG GCTCCGTCGCCG CTC CGGCGTCGAAGC TTTCGCCGGCTCAAC 86 372 LT409_RS07390 1667134 .. 1667152 + -4.5 -3.60098 AAAGACAAGGCCGTT CGTCCGT TTGTC GCGGATG TTTCACGTGAAACAT 54 50 LT409_RS07400 1669872 .. 1669926 + -4.4 -2.78384 ATCTCGCGCAGAGCC GCCACCAGCTTCT-CGTTGTCCTCGCG CGTG CGC-ACGGCAACGCAGAAG-TAGCGGC TGTCCTCGAGCGCGG 42 109 dinB 1672524 .. 1672554 + -9.6 -3.34398 CGCACGAGCCGAAGC GTCCTGTGAACGCT TCG AGCGAGCTCAGGAC TGTTTGAGCACGGCA 63 140 ileS NONE lspA NONE LT409_RS07430 1678519 .. 1678532 + -3.7 -3.14132 TCCTGGCATCCACGT GCGAG AACA CCCGC TTGATGAACGGCAGG 45 248 hemH NONE coaBC 1681460 .. 1681488 + -17.5 -3.01791 TGGCGTAGGAACGGA TGCAGGGCGCC TTGGACC GGCGCCCTGCA TCTTGCGGCGGCCCT 87 33 LT409_RS07455 NONE LT409_RS07460 1685405 .. 1685433 + -14.6 -5.31275 GACCAGCAACTTAGA GCAGGTCATCGG AGAAA CCGGTGGCCTGC TTTTTTATGCTCAGC 100 36 LT409_RS07465 1687078 .. 1687099 + -14.5 -5.47218 TCGGATGAACGAAAA GGCTGGAGA TCGA TCTCCAGCC TTTTTTTGCGTCGAG 100 53 LT409_RS07470 1687671 .. 1687710 + -17.8 -4.57569 GCGGTCCTCTTTCGG GACGAAGCGGCCGGGATC GAAC GTTCCCGGCCGCTTCGCG TTTTTCACGGCATCG 100 73 LT409_RS07490 1692153 .. 1692166 + -8.1 -2.71144 GTATACTGGCAAGGA TCGGG ATGA CCCGA TCCTTGCCAGGCGTC 53 71 LT409_RS07495 1694021 .. 1694038 + -10.5 -4.90079 TGGTAGAGTGGCCTG GCGGGCG ATAT CGCTCGC TTTTATTGTTCAAGT 100 240 LT409_RS07500 NONE LT409_RS07505 NONE nuoB NONE LT409_RS07515 NONE LT409_RS07520 NONE LT409_RS07525 1699558 .. 1699592 + -24.5 -4.05788 CTCCGTCGGAACTGC GAAGACCCGGGAACC CTGAC GGTTCCCGGGTCTTC TTTCGTTTCCGGCCC 100 47 LT409_RS07530 NONE LT409_RS07535 1702861 .. 1702871 + -3.2 -2.62184 CAATTGAGAGGTGAG CATC CAA GGTG TACTATCAGCCAGAC 40 34 LT409_RS07540 NONE LT409_RS07545 NONE LT409_RS07550 NONE LT409_RS07555 1706528 .. 1706545 + -2.5 -4.17089 CAACATGCGCAAAAC GCGCGCC GTTC GGCTCGG TTTTGGACGTTTGAC 60 90 LT409_RS07560 NONE LT409_RS07565 NONE LT409_RS07570 NONE LT409_RS07575 NONE gluQRS 1711780 .. 1711809 + -3.4 -4.65078 CCGCAGCGACTCCGT TGCCGTGGGCGC AAAACG GCACCCATGACG TTTTCTTGAGGCTAT 70 60 LT409_RS07585 NONE LT409_RS07590 NONE LT409_RS07595 NONE LT409_RS07600 NONE LT409_RS07605 1717757 .. 1717770 + -5.9 -3.53012 GGGAAGCGCGCGGTT CGGGC TGTC GTCCG TTTCGGGAGGGGGAG 55 49 LT409_RS07610 1719548 .. 1719559 + -7.2 -2.78762 AGGTTTGCGCGAACG CCGG CACG CCGG TCATCTTGCTCATCT 49 220 LT409_RS07630 NONE LT409_RS07635 NONE LT409_RS07640 1724079 .. 1724094 + -7.5 -4.15044 GCCTCTAGGCCGACG CCCGC TTGCGC GCGGG TTTCTTCGCCGGAGC 71 73 nrfB 1727394 .. 1727418 + -7 -3.21099 CGTCGCGCAGCACGA GCACGGGCAC GTCGA GGGCCGGTGC TTCCTCCTGCACGCC 54 234 LT409_RS07670 1731209 .. 1731240 + -13.8 -3.95219 GAAGCAAAAAGCAAA GCGCTGCGGGTT CCGTGCAT AACCTGCAGCGC TTTATGCGGTTTCGA 91 128 lexA 1736493 .. 1736528 + -29.8 -3.19246 CTACCCTGCGACGAA GCGAGCCGCCCCGGGT CGAT GCCCGGGGCGGCTCGC TTACCTTAGAGTTAC 100 207 LT409_RS07810 1763076 .. 1763090 + -9.2 -2.60615 TCTCTCCTCCTCTTC GCGGGT CCC GCCCGC ATCTTTCAGAACAAT 56 280 LT409_RS07970 1793450 .. 1793477 + -19.2 -4.28488 AGAATTCTGATCGAG CGAGGGCGCGTC AGCC GATGCGCCCTCG TTTCTATGTTTCAGT 100 44 selD 1815144 .. 1815171 + -4.7 -3.59979 ACCCGTTGTCGCACA GGC-CGCCCGTC AGGAA GTAGGGCGCGCC TTTGCCCTGCGCCAC 55 463 selA NONE selB 1824385 .. 1824413 + -11 -3.86015 TTCTATCCGGGAATA CGAAAAGCGCCCC GATC GGGGCGCTTG-CG TTTCTGGCGGAGATG 82 55 LT409_RS08235 1849993 .. 1850005 + -3.4 -3.78022 GCTTCGTTAATGCAC GCTT TTGTC AAGC TTTCGTACGTATGAA 54 68 LT409_RS08240 NONE yfcE 1852311 .. 1852325 + -7 -2.71144 GATCAAACCGCTCAA CGCCGC CTT GCGGCA TGCTTCGGCCAGCTC 48 345 LT409_RS08265 1858999 .. 1859025 + -6.4 -3.72576 CTGATCGAGGAGCTT GACGAAGCGACC CGT GTTCGCCACGTC TTTGCTCGAGAACCG 62 243 pta 1863592 .. 1863629 + -27.9 -3.61764 CGCCTGCTTGCCAAA CGACGAGGCCCCCGC-GT TGA ACTGCGGGGGCCTCGTCG TTTACAGCTTCGTGC 100 50 LT409_RS08320 1870161 .. 1870176 + -8.2 -3.53091 CAAACCGAACGGAAA GGGGCC TGCA GGTCCC TTTCCGACAAGCGCT 62 90 LT409_RS08330 1872488 .. 1872520 + -22.1 -4.55697 CGCATTCGAGCATTC GCGCCCCGCATCG CTTTCGA CGATGCGGGGCGC TTTGTTTCTCCACCT 100 58 LT409_RS08335 NONE napA NONE LT409_RS08345 1876400 .. 1876417 + -2.7 -2.9856 GATAAGAAGAACGAA CGTGA-GG AAC CCATCATG GTTATTTCGAGTTTG 41 132 LT409_RS08350 NONE LT409_RS08355 1877569 .. 1877620 + -40.5 -3.53012 GGCGAGGAATGACCC GGTGCGGCCTCTGGTGCATCGCG CGGCTT CGCGATGCACCAGAGGCCGCACC TTTCGCGCGCGCCGC 100 29 LT409_RS08395 1883936 .. 1883958 + -13.5 -3.68244 CGGAGCAACAAAAAA GAGCCTTCG CAGAT CGAAGGCTC TTTCGAATTCATGGT 88 357 LT409_RS08405 1884295 .. 1884325 + -7.5 -4.26344 CCATCGTCGCTAACA GGCCGGTCATTAT CAAAA GTTTTGACCGGCC TTTTCATGACGGTGT 71 38 LT409_RS08410 1884421 .. 1884448 + -6.9 -3.60792 ATCCGGGCGTCGCCT CCATTCGCTCC CCTTGC GGGGCGGACGG TTTGAGAATTGAAAA 60 22 LT409_RS08415 1884562 .. 1884583 + -17.3 -5.1675 TCCATGATCGTACAA GCCCGTCGG CAAA CCGACGGGC TTTTTTCATGCCTCG 100 37 LT409_RS08460 1892587 .. 1892606 + -9.2 -3.36327 GCAGCTTGATGAAGT CCTGCAGC GCCG GCGGCAGG TTCTCCATGCCGTGC 64 208 LT409_RS08530 1909801 .. 1909814 + -3.7 -4.09739 CGCTGTCGCCGTTCA GCACG AACT CGCGC TTTTGCAGCGCTTCA 62 485 gdhA 1915943 .. 1915975 + -16.3 -4.62336 AAGCATCGCGCGCGG AAACGGGTCTCGTCC TCA GGACGGGGCCCGTTC TTTTTGCCATGCAAT 100 56 LT409_RS08580 1923780 .. 1923821 + -8 -3.85698 GCAGGTGGCGGTGGC GCGGTCGGCGAACGT-GGCG GCCA CGCCCACGTTCAC-GGCGGC TTTGTAGCGCACGCC 67 201 LT409_RS08630 1935659 .. 1935678 + -4.9 -4.08692 GCTTGGCGTTCGATC CGCCGGT CCCTTC ACCGGAG TTTTCGCCCGGATTC 64 216 LT409_RS08680 1950191 .. 1950212 + -17.3 -4.4267 TTTTCGCCCTTGAAA CCCCCGGAC TCGC GTCCGGGGG TTTTGCCTTTTCCAG 100 52 LT409_RS08690 1953022 .. 1953048 + -8.6 -3.05384 GCGAAACGGAGAAGT CGCGACCAGGGG TTT CGCCTGATTGCG TTCGCTCCGACGGCG 56 153 LT409_RS08730 1964558 .. 1964588 + -15.5 -3.24188 CTAGAAGGCTCTGCA TGCAGAAGCGCCCC GATC GGGGCGCTTC-GCG TTCGTCATGCTCTCC 85 37 LT409_RS08745 NONE LT409_RS08750 NONE LT409_RS08755 NONE LT409_RS08760 NONE LT409_RS08765 NONE LT409_RS08770 NONE LT409_RS08775 1974554 .. 1974564 + -4.6 -3.65812 GCGCACGCCCTCGAG CGGC ACC GTCG TTATGTTCGAGAACA 55 192 LT409_RS08795 1979851 .. 1979875 + -16.5 -5.75342 CTCCGACCGCCAAAA GAACCGCAGCG GAT TGCTGCGGTTC TTTTTTTTGCGCCGG 100 43 LT409_RS08815 1983750 .. 1983771 + -18.7 -3.32844 CAGACGATAGAAGAA GGCCGGGGC AAGC GCCCCGGCC TTCTCGCATACAGGG 95 57 LT409_RS08850 1991781 .. 1991808 + -17 -4.39877 TCGGGACGACACGCA AAACGCCCCGGC CGAA GCCGGGGCGTTC TTTCTTGCTTGTTGC 100 82 LT409_RS08865 1996289 .. 1996335 + -23.1 -2.73364 ATTCGCACCCTGCCA TCCCGTGCGGCGCTAGC-GGGA AGAC TCGCGGCTAGCGCCGCACGGGC TCCTTCGGCTCCGCA 100 44 LT409_RS08930 2009637 .. 2009662 + -20.5 -3.85817 TTCCCGCACGTGAAA GAAGGGGCCCG ACGT CGGGCCCCTTC TTTGTGCGAAGCCGT 100 56 LT409_RS09045 2035503 .. 2035524 + -2.1 -3.33399 ATCCATGCCACCCTG CCGACAGGGC AGA GCACGG-CGG TTCCCTTTCGTTCCG 44 119 LT409_RS09050 2037303 .. 2037334 + -24.5 -2.71144 GCTGTCATCAAGCAG CCGAGGGGGCGGC CACTGT GCCGCCCCCTCGG TCGTTCAAAGCCCTC 100 299 LT409_RS09055 2039052 .. 2039068 + -2.9 -3.53761 CGCCCTGGCCAGGCT CCTTGTT CGG AACGTGG TTTCGAAGCGAATTG 47 225 LT409_RS09060 2040636 .. 2040665 + -8.5 -3.35996 GCGCAGGCCAAGCGT CGCGAGGG-CCTCC CGG GGAAGTCCCTCACG TTGTACGTCACGATC 59 409 LT409_RS09130 NONE LT409_RS09135 NONE LT409_RS09140 2054199 .. 2054212 + -3.7 -2.80935 CTGGACCAACACGAC GGTGC TCCT GCTCC TCTCGTAGGTGAGCT 41 4 LT409_RS09145 NONE LT409_RS09150 NONE LT409_RS09155 2056062 .. 2056102 + -6.8 -3.01712 GCCGGAGAGGGGGAG GCGCAGGGCGAGGACCGCGG ACG CCGTG-TCCTACCTC-GCGC TCTTCCGCGACGGAG 52 68 LT409_RS09160 NONE LT409_RS09175 NONE LT409_RS09180 NONE LT409_RS09185 NONE LT409_RS09190 NONE LT409_RS09195 2067243 .. 2067255 + -9.1 -3.35996 GGTGGGGTAGATGGC CAGCG CCG CGCTG TTCTGCATCGGCATG 63 31 LT409_RS09205 2070765 .. 2070781 + -2.9 -4.45117 GAACAAGCACAGCGG TATTGCG ACG CGCGCTA TTTCTTTCCAATATC 66 389 LT409_RS09280 2088795 .. 2088834 + -4.9 -3.07522 TCACGCGAACGAACC CG-AGAACCGCTTCCCGC CGAGC GCGAGGAGCGGTTCGACC TATCTTCACCCCTCT 46 198 LT409_RS09285 2089799 .. 2089817 + -17.4 -5.18371 TCTCCCCGCCATTCA GCGCGCCC GAT GGGCGCGC TTTTCTTTTATGGAA 100 51 LT409_RS09290 NONE LT409_RS09295 2090813 .. 2090825 + -6.9 -3.37487 CCGCTTCACCGGATA CGGGT AGG GCCCG TCTTTGAGCATCTGC 55 310 LT409_RS09305 2092827 .. 2092850 + -5.2 -3.02511 CGATGCCCGTGATCA GGCGCGAG AAATCGCC CTCGCGCG TCTTCGCCACGTCCA 46 147 msrA 2101094 .. 2101140 + -32.4 -2.73364 GGCGAAGCCGAGGGA TCCCGTGCGGCGCCAGCCGTGA GAT TCCCCGCTGGCGCCGCACGGGA TCCTTCGCGTCCCCG 100 87 LT409_RS09350 2103587 .. 2103609 + -10.5 -4.07885 TGGGCTGCACGCCCA CGGCCTGGT TCTTC ACCTGGCCG TTTTCGAACACCATG 79 152 LT409_RS09360 2105429 .. 2105440 + -2.2 -3.38046 TGAAACAATCTGGTG CTTG AGAA CAGG TGTTTCACGTGAAAC 44 389 LT409_RS09375 2109412 .. 2109434 + -3.2 -3.38786 AGAAAAACGCCGTCT CAAGGCCGCC GAA GGCGAACATG TTGATCTTCCATATG 47 318 LT409_RS09395 2112639 .. 2112685 + -23.9 -2.73364 CGGGGACGCGAAGGA TCCCATGCGGCGACAGCCGTGG CGCT TC-CTGCTGTCGCCGCATGGGA TCCTTCGACTCCGCG 100 91 LT409_RS09425 NONE LT409_RS09480 2129487 .. 2129542 + -6.9 -3.35679 TGGTGATGTAGCGCC GCAGCGTCTCC-ACCTGCATGACGTCG ATGC TGCCGTTCTCCAGGTCGGAGATGC-GC TTCTGGCTGACGCCC 55 337 LT409_RS09525 NONE LT409_RS09530 2139490 .. 2139522 + -4.2 -3.14132 TGACAAAAGCGTGCA TG-GGGAA-CGGATGC GCA GCCTTCGCTTCCCGCA TTGGTCGAAGCGCGC 48 126 sstT 2141046 .. 2141094 + -23.4 -3.39449 TAAGGGGAACGGTTC CTC-TGCAAGAAGAAGGGCGGCT CCAG GGCCGCCCTTCTTCTTGCACGCG TTGCTATTGGTCGAC 100 38 LT409_RS09555 NONE LT409_RS09560 2144152 .. 2144172 + -11.9 -5.0925 CATTTGAATTCTAAA GGTCAGACA TCA TGTCTGGCC TTTTTCATTTTCCCC 100 39 LT409_RS09565 NONE LT409_RS09570 2146749 .. 2146781 + -24.9 -3.05384 CCGCCGCTTCATCGC GGAGCCCCCGCAGAC TCG GCCTGCGGGGGCTCC TTCGCTCCCCCCCCC 100 46 LT409_RS09585 NONE LT409_RS09590 2152195 .. 2152217 + -13.4 -3.90112 AGGCGTCCACGTTGT GCACGCGCTG CTC CAGCTCGTGC TTTACTTCGGCCGCC 86 133 LT409_RS09600 2153648 .. 2153678 + -5.3 -2.83403 GAGCATCGCCGTAGC GGGCGGGCGGC CCAAATAAC GCCTTCCGCTC ATTTCGTGCGCAAAG 46 7 LT409_RS09605 2156205 .. 2156243 + -6.7 -3.14344 GATATGAGCACTTTG GCGGCGTCGAAGTCGATG CGCT CGTTCACTGCGA-GCCGC TTGATCAGGGCGATG 51 457 LT409_RS09630 2160187 .. 2160240 + -6.6 -3.35371 CCCCCCGTCTCATTC CCGCACGCG-AAAAAGGATCCCCCGC CGAA GCAGGGGATCCTCGAAACGCGT-CGG TTCATTGCGGCTATG 56 117 LT409_RS09655 2166202 .. 2166215 + -3.7 -3.30159 AGCTCTGTTTTCGGA CGCAG GATG CGGCG TTGTCAACCGATTGG 47 172 LT409_RS09660 2166615 .. 2166637 + -12.7 -5.14563 CACCTGCGCCATCGA CCGTCCGCA CTCGC TGCGGGCGG TTTTTTCATGCCGAG 100 55 ligD 2169515 .. 2169560 + -7.3 -3.65351 ACGCGGTTGAAGCGG CGGTCGCAGAACAGCGCGCCGC CCA GCG-CGCGCACCTCGGCGGGCG TTTCGATCCAGCTCG 63 118 LT409_RS09680 2170701 .. 2170728 + -7.8 -3.50447 TTGGAGAAAGCGCCC GAACCTGCTATCG CTT CGATAG-AGGCTC TTCTGTACGGCTTCA 60 375 LT409_RS09690 2171783 .. 2171802 + -2.7 -3.84406 GCTCGCGCAGGGCGT TGCCGCG ATGGGA CACGGCG TTCTTCTCCTCGGGC 55 171 LT409_RS09705 NONE ybaK 2174560 .. 2174582 + -17.7 -3.06796 ATTCGCGACGAAAAA CGGGCCCGC TCGAT GCGGGCCCG TTGCGTAGGATCGGA 89 66 ssrA 2176949 .. 2176981 + -24.2 -3.87149 CCACCACTGACGACA GGAGCCCCGTCGGC GCGCA GCCGGCGGGGCTCC TTTGCGTTTCCTAGG 100 35 LT409_RS09745 2182753 .. 2182801 + -6.1 -3.84406 ATCGCGCACCACGAC GAT-GGTCTGCGACG-GCAGCGCCT CGT AGGCGC-GCTCGTCG-AGCCCGAGC TTCTTCTCGTACCAG 62 259 ade 2186241 .. 2186262 + -5 -3.28712 TTCAACCCGCACTCC CATGCGGG GAGTGA CCCGCGCG TTCTCGAGCACGGAG 49 358 LT409_RS09805 2199786 .. 2199814 + -2.9 -3.21924 GATCGACCCGATGCA CGGCCCCGTGG CTCCCGT CCCCGCGCCCG TCTTCTCGAAGATGC 45 361 LT409_RS09820 2205240 .. 2205268 + -15.9 -2.55606 GGCCGAGCGCGAACC GTGCGCTCGGCCG GCC CGGCCAGGCGCGC CTTCATCCTATGTGC 78 41 LT409_RS09935 NONE LT409_RS09940 2234441 .. 2234458 + -5.5 -3.47751 CGCATCCTCGATCTC GTCGACG ATGG CCTCGAC TTGTCGGTTGTTGGA 55 342 LT409_RS10000 2246500 .. 2246557 + -17.8 -2.96152 AAGTAGCGGAAGGAA GCTGTCGCGGTCCCGACGGCTCGCGC CTGTTTTC GCGCGAGCCGTCGGG--CACGAAGGC TCTATAAGTTGGTAT 86 35 LT409_RS10005 2247938 .. 2247966 + -8.8 -3.55444 GCTTGCATACGCCGA TTGCGTGCGATC ACGCA GGTCGCACGCCG TTTACAGGGTACCAA 66 90 LT409_RS10010 2249200 .. 2249214 + -7.1 -2.65112 CTGGACGGACTCGAG GCGGA AGGCG TCCGC TGATGTACGTGAGTT 49 8 LT409_RS10015 NONE LT409_RS10020 2250327 .. 2250350 + -6.6 -3.28712 GCTAGCAGGCATCGA GGCAGAGGCG CCTA CGCTTTCGCC TTCTCACGGCCGAAC 56 36 LT409_RS10080 NONE LT409_RS10085 2268530 .. 2268555 + -17.7 -3.10164 AGGCGGGAAATAAAG GAAGACCCCGA GCAT TCGGGGTCTTC TTGCATACTAAATGG 89 28 LT409_RS10110 2274802 .. 2274827 + -9.7 -3.14564 CCCATTGCCGGTAGA GCTCCTTGACC CTCA GGTAGAGGAGC TTCATCACCGCGTCC 61 177 LT409_RS10145 2282866 .. 2282884 + -4.4 -2.63991 GACGAATATATAATA CCCTTGCT GGG AGCTTGGG ATTCGTTCGATTAAA 43 128 LT409_RS10150 NONE LT409_RS10155 NONE LT409_RS10160 2290573 .. 2290584 + -5.8 -2.98823 TTCAAACCAGGCGAT CGAC GGTA GTCG TCTATGTCCGGAACG 48 217 LT409_RS10220 NONE LT409_RS10225 NONE LT409_RS10230 2306797 .. 2306811 + -4.2 -3.41527 CCCTCTTCGCGCCCA CGAGAT ACG AACTCG TTGTGGTACAGCTTC 49 194 LT409_RS10275 2319502 .. 2319513 + -2.2 -3.34089 AGCGAGTCTAGAAAG CGGA GGGT TTCG TGTTCGTTCTTCAAA 44 30 LT409_RS10280 NONE LT409_RS10285 2321131 .. 2321159 + -18.9 -2.63079 AAGCCGCTTGAAAAC ACGTGGAGGGTCC TCT GGACCCTCCACGA TCCGTTCTATGACAG 88 53 LT409_RS10310 2330569 .. 2330590 + -11.5 -3.36096 CCGGTGACGGCTTCC CGCATGCCG ATCG CGGCACGCG TTCGCTTTCTATACT 72 56 LT409_RS10315 2331413 .. 2331424 + -5.8 -2.62396 TAAACGCCGGGAAAT CGCA CGCT TGCG TCCTGTCCGACCATC 46 49 LT409_RS10320 NONE LT409_RS10325 2331756 .. 2331781 + -12.6 -5.48213 TACCAAGAAATTGCA GGCCAGGAGC GCACAA GCTTCTGGCC TTTTTCTTTTCGATC 100 36 LT409_RS10330 NONE LT409_RS10335 2334915 .. 2334955 + -9.6 -3.67597 AGGTTGAGGCCGGCG GC-GAGGGCGCCGCGAACG TAGT CCTTTGCGGCGCGCACCGC TTCTTCCATCGGAAG 68 287 rnpB NONE LT409_RS10415 NONE LT409_RS10420 2351278 .. 2351332 + -8.5 -4.40358 GGTATTGCACGGGCA CATAAGGC-CTGGTCGCAGATTCCGC ATAC GAGGAATCTGCGACCAATGCCCCGCG TTTTCTGCCATAGGT 77 134 LT409_RS10480 NONE LT409_RS10485 NONE LT409_RS10490 NONE LT409_RS10495 NONE LT409_RS10500 2367977 .. 2367989 + -9.1 -3.65046 GGTGGACTCGGTCTC GGTGG CCG CCACC TTCTTCACCTGCCCC 68 474 LT409_RS10585 2390075 .. 2390088 + -9.5 -2.8511 AGCTGATGGTTTGAC GCGGG TTCG CCCGC TATCGTGGTATGCTG 59 76 LT409_RS10590 NONE LT409_RS10595 2392256 .. 2392278 + -5.5 -4.56597 TCTTCGCCCGAAAAA CACGCTCCA ACGTC TGAGGCGTG TTTTTCGGGCGAAGA 74 70 LT409_RS10620 2396964 .. 2397016 + -28.7 -2.53263 CCGGGCCGCAACCCA TCATCGCCCGAAAAACACGCCTCAG CGG CTGGAGCGCGTTTTTCGGGCGATGA TGGGTTGCGACTGCC 100 52 LT409_RS10630 NONE LT409_RS10635 2401489 .. 2401513 + -4.8 -3.61398 GAGCAGCAGCATATC GGCCAGCTCC TCGAT GGTGTCGGCC TTCTTCACGGCGCCG 55 451 LT409_RS10645 2405738 .. 2405769 + -3.1 -4.8543 AGCGGGCAAGAAGAA GCG-CGAGCGTTC ACAACATC GAACG-TCGACGC TTTTTGTGCAAATTC 74 243 LT409_RS10655 NONE LT409_RS10660 2410046 .. 2410072 + -8 -3.22475 CGGTGGTCAGGATCA CGG-GGCCGTC CTCGGT GATGGCCACCG TCTTCTCGAAGTGCG 57 71 LT409_RS10670 2412314 .. 2412346 + -25 -3.27022 CTGCCCGAACGAACG GAAGCGCCCGCGGA ATCAC TCCGCGGGCGCTTC TTCGTCTCCCGTGAG 100 56 LT409_RS10760 2424444 .. 2424465 + -17.3 -4.89477 TGCGATCGTTCGGAA GGAGCCGCC CTCG GGCGGCTCC TTTTCTTGTTCGGGG 100 56 LT409_RS10790 2437031 .. 2437056 + -18.3 -3.66908 GCAAGGCAACCCCCA GGGCTCGCTCC GCAA GGAGCGGGCCC TTGCTTTTGAGAAAG 100 63 LT409_RS10795 2438074 .. 2438103 + -3.5 -3.91897 GTTGTCTACGCCTTA CCGC-GCCTGCG CGCGCGA TGCAGGCAGCAG TTTGTCAGTGCAAGC 56 136 LT409_RS10800 NONE LT409_RS10805 NONE LT409_RS10810 2442018 .. 2442042 + -19.3 -4.96848 TACGACGTTTCCCCT GCGCCCTCGGT TGA ACCGGGGGCGC TTTTTATGTGGCGAC 100 44 LT409_RS10815 NONE LT409_RS10820 NONE LT409_RS10825 2444789 .. 2444816 + -19.2 -5.14965 AACCCGATGCGCGAA GCCCTGGAGGGG ATCA TCCCTCCAGGGC TTTTTTCATGCCCGT 100 50 LT409_RS10960 NONE LT409_RS10965 2467544 .. 2467558 + -3.5 -4.08279 GCTTGGCGTTTCGGT GCATG TCGAT CGTGC TTGTTTATGCGGTCT 59 82 LT409_RS10970 2469119 .. 2469139 + -6.9 -3.08298 GCCTAAGCAAAGGAT GGCTTTTCA TAG TGAAAAGCG TATGTCCTTTGCTTG 52 75 LT409_RS10975 2470050 .. 2470061 + -2.2 -3.13403 GTGTACCAGAGAGGC GTTC AATT GGAC TATTGGTAAACCCAA 43 5 LT409_RS10980 NONE LT409_RS10985 NONE LT409_RS10990 NONE LT409_RS10995 NONE LT409_RS11000 2475964 .. 2475976 + -4.8 -4.36914 TGCGCGAAGCCCTAT CGTG GAGCG CACG TTTTCTCAGAAGGGC 68 218 LT409_RS11010 2478042 .. 2478052 + -6.8 -3.62224 CAGATCCTTTCCCTC GCAC GAC GTGC TTCTTGCGCGGGTCT 60 113 LT409_RS11015 2481375 .. 2481395 + -4.6 -4.15044 GAAAGCGCGTTCCCA GAGGCCGG ACTTG CCGCCTTC TTTCTTGAGCAGGCG 65 509 LT409_RS11080 2497519 .. 2497531 + -10.5 -3.2614 CTGGTATTCCGGCTC GCCCG TCT CGGGC TTCATCTGGCCGATC 65 314 LT409_RS11130 2509302 .. 2509340 + -13.7 -4.08692 CCACAATCCTCATGA CAACGGGCGGCATCCGC GCAAG GCGGGTGCCGCCCGCAC TTTTGAAACGCGTTG 95 89 LT409_RS11135 NONE LT409_RS11140 2510506 .. 2510525 + -2.8 -3.7282 CCGCAGCGCGCGCAG CCTGGTAGG CTT CC-ACCAGC TTCTTCGTCACGTCG 52 150 LT409_RS11150 2513255 .. 2513287 + -23.6 -3.51232 GGCCGCAGCAGAAAC GAAGCGGGCCCATC ATCGC GATGGGCCCGCTTC TTCATTTCGGAACAG 100 44 LT409_RS11170 2517314 .. 2517329 + -3.2 -3.08133 GATGCGCTTCGTGCG GGCC TCGACCTC GGCC TTCGCTCGCTCGATG 43 175 LT409_RS11180 2519613 .. 2519636 + -18.2 -4.56597 CGCCCGCAGTTGAAA GCCTCTCCGG AACC CCGGAGAGGC TTTTTCACGCCGGGA 100 71 LT409_RS11195 2523551 .. 2523605 + -17.1 -4.62783 GCGGCCACGCGGTTG CCGGAACGAGAAACGGGGGCGGCCGT TCAC GCGGCCGCCCCCGTCG-TCGTTACGC TTTTTCAGATGCGTA 100 40 LT409_RS11260 2540297 .. 2540309 + -3.4 -3.84451 GGCAGGTCAAACCCT CGAT AAACC ATCG TTTAAATTTCGGAGG 54 289 LT409_RS11265 2541683 .. 2541714 + -19.6 -3.136 GGAGATATATGAACA GGGCAAGACCGAGA GAAA TCTTGGTCTTGCCC TCTATTGCCTCTTGA 91 164 LT409_RS11290 2547086 .. 2547096 + -3.2 -3.5594 ACGACAAGGGAATAC GGGA TCT TCTC TTTCCCAAGTGACTT 51 392 LT409_RS11305 NONE LT409_RS11310 NONE LT409_RS11315 2556106 .. 2556134 + -18.9 -3.61398 ATTCCTAAACGCGAA CGGTCCTGCAGCA TGC TGCGGCAGGACCG TTCTTGCGAGGCGCG 100 67 LT409_RS11340 NONE LT409_RS11345 2561883 .. 2561902 + -4.2 -4.74132 GTTAACGAGGCCGCA TCGTCGCGG CCT CCGTG-CGG TTTTTCGTCAAGTAT 78 473 LT409_RS11425 NONE ppk1 2586855 .. 2586890 + -17.6 -3.62096 ACTTCCTCTCGCATG AAAACGCCCTCGGCTC TTCG GAGCCGAGGGCGTTGC TTTCGGATGATGCGG 100 47 LT409_RS11435 2587469 .. 2587498 + -7.7 -4.07568 GTCGGGAACTTGCCC GCACGCAGGGGGG GGGG CAACCCTGCTTGC TTTTCGCCCCGAAGC 71 138 LT409_RS11460 2600290 .. 2600308 + -6.6 -3.78934 CTTTTCCATGAGGGC GCAGGGCT GGT AGCTCAGC TTGTTCTCGCGCAGG 62 311 LT409_RS11470 2601981 .. 2602016 + -12.4 -2.83164 GTAAACGCGCCCGTC GCGGAGGCGGTCTCGC GTGC GCGGGACCGCCGCACC TGTCATACTGGCTCG 69 37 LT409_RS11475 NONE LT409_RS11480 2603862 .. 2603884 + -2.6 -2.72991 CCGAGAACCCGCCAA TCGCG-GGC ATAGTC GCCGCGCGC TCGTTGACCCTGTAA 39 63 LT409_RS11485 NONE acs 2606629 .. 2606661 + -29.3 -3.59979 CTCGCGCACGAAGGA CCGCCCGCGATCCGT CGA ACGGATCGCGGGCGG TTTCGCGTCGGGCGG 100 49 LT409_RS11505 NONE LT409_RS11510 NONE rsxC NONE LT409_RS11530 NONE LT409_RS11535 NONE LT409_RS11540 NONE LT409_RS11545 NONE LT409_RS11550 NONE LT409_RS11555 NONE LT409_RS11560 NONE LT409_RS11565 2617746 .. 2617758 + -6.2 -3.18264 CATGCGACGGCCGAC CGCG GAAAG CGCG TTCGTGCCTGACCGC 50 2 LT409_RS11590 2622250 .. 2622305 + -4.7 -2.57916 CGCACCCGATCGCAA CGACG-G-A-ATGCAACCGGCCGTCGGC CTA GCTGTCGGCCGGTTGCAGATGCACGTAA ATACTTTCTTTTTGA 43 44 LT409_RS11595 2623019 .. 2623047 + -6.8 -3.29263 GGGATAGAGCGAGAT C-CCGGATGTTTC ACGT GAAACATCGGGCG TTCTAGCACAAATGT 56 160 LT409_RS11620 2630102 .. 2630116 + -7.1 -5.08601 CGACGAAAACCAGGG TCCGC ACGTC GCGGA TTTTTGTTCCGCTGC 89 319 LT409_RS11625 2632013 .. 2632044 + -15.8 -3.57561 CTTCACGATGGAGAA GCGCGTGGCCCG-CG CGT CGACGGGCCGCACGC TTTCGGCGCTTACGC 93 349 LT409_RS11660 NONE LT409_RS11665 2639999 .. 2640017 + -4.4 -4.85267 TCACAAGACGCTTGA CCCCGACG CAG CGTCGTAG TTTTTACTCCTTTCT 78 26 LT409_RS11670 2641427 .. 2641439 + -4.8 -2.71712 TTTCAGCCCGATTGC GTGC AAGTC GCAC CTTTCCAACGGCCGC 43 56 LT409_RS11675 2642585 .. 2642622 + -17.7 -3.54459 GCTGGTAGTTCCTTT CAGAAGCGGTCGGGGCG GGCT TGCTCCGGCCGCTTCCG TTTCACGGCCGTTGC 100 33 LT409_RS11760 2659364 .. 2659385 + -5.9 -5.27938 TGGTCGATCACATTA TGCAATATG CATG CAAATTGCA TTTTTATTTGCAGAT 90 46 LT409_RS11865 2686756 .. 2686791 + -14 -3.53444 CCCGCGCGCAGCATC CTAC-CCGCGCCCCG ACCTCCC CGGGGCGCGGCGTCG TTTCGACCGCCATCA 86 74 LT409_RS11905 2698467 .. 2698501 + -7 -3.62224 GCTCGACGCTGGCCT TGGCGTTCTCGAGCGC CTC GCCTTCGAGACCGGCG TTCTTCAGCGCGTCT 59 455 LT409_RS11915 2701848 .. 2701865 + -11.3 -5.64274 CCCTTTGTCTTTCTT TGGGACG TTCG CGTCCCA TTTTTTTATGCCTGC 100 226 LT409_RS11985 2716879 .. 2716911 + -14.2 -2.71815 ACGCATTCGGATAGA AC-AGGGGCCCGTTG AGAT CAACGGGCCCCTCGA TGCGTTCTTTCGCTC 73 57 LT409_RS12010 2723364 .. 2723389 + -20.5 -2.77999 CCTCCCTCTCCCAAG CGAAGGCGGCC TCTC GGCCGCCTTCG TCGTCTTGCTCGCTA 95 55 LT409_RS12075 2742678 .. 2742700 + -14.9 -5.37593 ACCGCTGACAAAAAA GAAGCGCCC GTTCA GGGCGCTTC TTTTTTACTTTGCAA 100 46 thrC NONE LT409_RS12170 2761869 .. 2761914 + -4 -3.65046 TGTCTCATTCCCCTG TCTCATTCAGC-GGTCG-CGGT AGTA GCGGACGACCAGCTGGGTGCGA TTCTTCAGATCGAGC 51 53 LT409_RS12185 NONE LT409_RS12190 NONE LT409_RS12195 2767358 .. 2767372 + -7 -3.62046 CTCTTGCGCGGGCGG CCCGGC TTC GGCGGG TTGTTCAGACGCTCC 59 184 LT409_RS12330 2787642 .. 2787670 + -23.3 -4.90266 ACCACGGGATACGAA GAGACCCGTCGGA TGA TCCGACGGGTCTC TTTTTCATTGCTGAC 100 37 LT409_RS12350 2793336 .. 2793366 + -3.9 -4.26903 ATCGCCTCGGCCAGC GCCTCCTCGTCGG CGCCT TCGATGACGATGC TTTTGATCGCGTCGC 66 195 LT409_RS12360 NONE LT409_RS12375 2799825 .. 2799847 + -12.7 -3.89614 TTTCTCCCGCACGTG GC-CGCCGGC TTCC GCCGGCGCGC TTTCTCGCGCTTGCG 86 172 LT409_RS12395 2806628 .. 2806638 + -8.2 -3.01791 CCCGTGCGCCTGCGG GGCG GCT CGCC TGTTAGGCGGCGCCT 56 210 LT409_RS12415 2812383 .. 2812428 + -9.7 -3.01712 CCGGGCCCTCCGGGA GAGCGGTTCGCCGTTTGCA AGGGGGTG TGGGGATGGCGAACCGCGC TCTTGGAGGGCCGGG 60 43 LT409_RS12435 2819050 .. 2819068 + -3.1 -3.40403 CCGCTCGGCAGCCGC GCGCA CGCCCGAGA TGCGC TTCTCCTCGCGCGCG 47 225 LT409_RS12465 2827250 .. 2827260 + -2.4 -4.04318 CTGCGTACCGTTCGG GCGC TTA GCAC TTTGTACTATATGCG 57 80 LT409_RS12490 2836216 .. 2836274 + -4.4 -2.80796 AGAAGTCTTAGATGC GTCGCCTTGGCG-CAGTCGGAAGGAAGC TGCGC GCTCCCCTTCG-CGGACGCCGAGGCGCG CTTTCCCTACTACGC 43 154 LT409_RS12495 2836869 .. 2836911 + -3.2 -3.66018 CCGCTCCTCCACACC CAATGCGTCCTTGACGGC GTAGTCA GCCGTCACCGCCGCAACG TTCTTAGCCTCGTCC 51 502 LT409_RS12505 NONE LT409_RS12510 NONE LT409_RS12515 NONE LT409_RS12520 2841276 .. 2841310 + -3.5 -4.56597 CGACCCCGGGCAAAA GGCGGCTTGGC AAGGGCTTTGGGG GACGAGCCGCC TTTTTCCCGGGAGCG 68 109 LT409_RS12525 2843301 .. 2843323 + -10.6 -4.56597 GACGATCTCGAAAAG CACGCCTC AGCGAAC GAGGCGTG TTTTTCGAGCGAGGA 89 77 LT409_RS12545 2850578 .. 2850593 + -8.2 -3.92522 CCCTCCCTCAAGAAA GGCCCC GATA GGGGTC TTTCTCAGCTTGAGA 69 61 LT409_RS12555 2853337 .. 2853366 + -4.1 -3.05384 AGGGCGGCATCGAGC CCGACGGCGAGCCG GAT CGG-TCGGGGGCGG TTGCGTCGACACAGG 43 446 LT409_RS12605 NONE LT409_RS12610 NONE LT409_RS12615 2868048 .. 2868094 + -17.5 -3.01924 CCTTCCCGGAACCGA TCGAGGCAAGCGGGG-CG ATCCCCCTCCCC CGGCCCCGCTTGCCTCGA TCTTGCGCCGCCGTC 87 109 LT409_RS12620 2872153 .. 2872169 + -2.1 -3.28712 TGCTTCTTCGAGGCG GACAAGG ACT CCTAGAC TTATACGCCCAGACC 44 11 LT409_RS12650 2879631 .. 2879654 + -5.2 -3.83205 TAACTCCCCACGGCT CTCGGATCGC TTCG GCGGTTTGGG TTTACTGTGAGCGCT 57 174 LT409_RS12655 2883815 .. 2883834 + -5 -3.01712 CTGTCTGTTGCGTCC CGATCGTT GCGC AACGATCC TCTTGGCGGAGCACG 46 469 LT409_RS12665 2886378 .. 2886393 + -6.8 -3.31792 GATGACGGCGGTGCC GCTGGG CGCG TCCAGC TTATCGCGGTCGTGC 55 350 LT409_RS12720 2901056 .. 2901083 + -6.9 -3.53224 CGCCGTCGCTCGAAA CGGTCGGTTTC CGCGAC GATTCCGACCG TTTCGAGCGACAATC 58 76 LT409_RS12750 2908362 .. 2908375 + -4.5 -3.21924 CACCTGCACCTCGTT GTACG ACAC CGTGC TGTTGTCACCGCTCA 47 435 LT409_RS12770 2913870 .. 2913904 + -10.7 -3.16881 AGGCGGCGCGCTGCT CG-GGCGAGCGCTTGC GCAG GTAGTCGCTCGCCGCG TTCGTCAGCTCCATG 63 481 LT409_RS12830 2927940 .. 2927952 + -3.3 -3.53444 CCCGAACCAGGAAGC TAGCC GAG GGCTC TTGCTTGTTCGAGGC 49 23 LT409_RS12860 2934654 .. 2934679 + -3.9 -2.71791 GCTCGACGAGGACGA CGACCCGTTAC TTCA GTAGCCTGTCG GTTTCAAGCAGGAAT 41 7 LT409_RS12880 2939534 .. 2939557 + -14 -3.20348 CGAGAGCGCAACCCG CGGATGTTTC ACGT GAAACATCCG TTCGCTGTTGCTCGA 78 129 LT409_RS12895 2943174 .. 2943197 + -16.7 -3.61922 GGCACGCAAAAAAAA CGCCGCCCG TTCGTC CGGGCGGCG TTTCCAGTGCGTGTT 100 211 LT409_RS12915 NONE LT409_RS12920 2951313 .. 2951331 + -6 -2.83343 ACCGGAGGAGGTGCC GCATAATG TCG CATTACGC TATCGTCGTCGATCT 46 20 LT409_RS12925 NONE LT409_RS12930 2952745 .. 2952799 + -25.9 -2.53213 CGAGCCGGGGAGACG GCCGATGCCGAAGCGCTGTCCCG ATCCCCCTC CCCGACAGCGCTTCGGCATCGGC TCGGTTGACCGCTTG 100 62 LT409_RS12935 NONE LT409_RS12940 2954565 .. 2954585 + -5.4 -3.01712 CGGAGATGACCAGCT CGCTC-TGC ACGC GCGCGAGCG TGTTGCCCCGCCCCA 46 165 LT409_RS12950 NONE LT409_RS12955 2958574 .. 2958604 + -16.9 -4.61873 CGTCACCCTCCCCGT GCGCCCCGGCT CCCTCCCTC AGCCGGGGCGC TTTTCGTTTCTAGCG 100 52 LT409_RS12965 2962491 .. 2962509 + -2.3 -2.77895 ACAGCAGGAACACCA GAGC-GCC CAGC GGCAGCAC GTTGTTCGACATGAG 38 294 LT409_RS12975 NONE LT409_RS12980 NONE LT409_RS12985 2966759 .. 2966804 + -28.4 -3.48342 GCGGCGGGTGCGCGG ACG-GAACGGGGGCGGGGCGC TCGAT GCGCCCCGCCCCCGTTCGCGA TTCTGATGCTTCGTT 100 61 LT409_RS12995 2971967 .. 2971995 + -15.3 -4.25104 CCCGAGCAAACCGAA GAGGCGCTCCTGT TTT GCAAGAGCGCCTC TTTTCCTCGCCAAGA 100 61 LT409_RS13000 2972836 .. 2972855 + -12.8 -3.59262 TCCATCTGCCAGAAA CGGTCGCC CTCG GGCGGCCG TTTCCACGTCTGCGA 82 59 LT409_RS13005 2973633 .. 2973643 + -8.2 -4.08767 CTTCGGCCTTCGCTA CCCC TTC GGGG TTTTCAGGGAGTCGG 71 116 LT409_RS13040 2981110 .. 2981141 + -2 -3.78022 CCCTGAACGGGCGCC CCTGCCGGGCGCCC GTTC GCATCCCCGGCAGC TTTCCTCGATGTCCC 52 66 LT409_RS13060 NONE LT409_RS13065 2987245 .. 2987271 + -16.6 -4.17048 AAACGCAAGCGCACT GGAAGGCGGCCA CCG TGACCGCCTTCC TTGTTTTCACCCAAA 100 50 LT409_RS13070 2988484 .. 2988494 + -6.8 -4.3586 CGGCAGAGGAGAATT TCGC CCT GCGA TTTTCATATGCGTAA 75 343 LT409_RS13090 2993441 .. 2993461 + -3.9 -3.04263 GGACGTCCAGCTTGC CGTACAGGT TGC GCATGTGCG TCTTCACCGTGGACT 44 99 LT409_RS13100 2996710 .. 2996739 + -17.1 -2.53911 AAACGAAAGTCCGAC AGCTGTGGCGGCC CGAC GGCCGCCGCAGCC TCGGTTAGCGGTTGG 83 39 LT409_RS13135 3003550 .. 3003590 + -6 -4.46212 GCAGAGCAACTAGAG AAACCCCAGGTGACAGAA AATCC TTCCGCCGCCTGGGGCTC TTTTCTGCTCGCAAA 74 181 LT409_RS13155 3008577 .. 3008589 + -9.1 -3.23216 GGCATCTTCGACGGC GGCGA TAA TCGCC TTGCTGGTGGTGGCC 61 177 LT409_RS13175 NONE LT409_RS13180 NONE LT409_RS13185 3016979 .. 3017000 + -2.2 -3.81287 CCCGAGTCTTCTATA GTGCGCTT CATGGC GAGCGCAA TTTCGTAATCCTCTA 53 485 LT409_RS13210 3023959 .. 3023995 + -12.4 -4.52857 CGCGCGTCCCCTCCC CG-CGAAGGCTCCGC CACCAACA GCGGAGTCTTCGTCG TTTTCTCTCCGCGCT 100 54 LT409_RS13295 NONE LT409_RS13300 NONE LT409_RS13305 3042893 .. 3042912 + -11.4 -3.17212 AGGTGATGCAGCGGC CGTGGCTG TTGC CGGCCACG TTGATGGGATAGTCC 66 437 LT409_RS13315 3046521 .. 3046546 + -10.3 -3.27923 CCACGATCACGCGGT CGCCCGCCACG TGGC CGTAGCGGTCG TTCGTCGTCTTGAAG 65 382 LT409_RS13335 3053905 .. 3053937 + -9.7 -2.71712 CAGTCCGCTCGAACA CCCGCGCACGACGGG CCT TCCTTCGTGCGCCCG ATTTCCACCAGCCCG 57 84 LT409_RS13340 NONE LT409_RS13345 NONE LT409_RS13350 NONE LT409_RS13355 NONE LT409_RS13360 3060776 .. 3060815 + -10.1 -2.82623 GTCGAACACGAGGAG GCGCTT-GCCGGTGGCG ATGCAGGC CGCCAC-GGCGAGGCGC TGCTTCTGGCCGCCC 60 322 LT409_RS13380 3064856 .. 3064866 + -3.2 -3.31144 CGATGGCCTGCTGGA TGAG CTG CTCG TTCTCCGGGTCGACG 47 321 LT409_RS13485 3087935 .. 3087947 + -6.2 -4.62783 GCTGCCGCATACGTT GCGC GTCTG GCGC TTTTTCGGATCCGTG 76 193 LT409_RS13490 3088781 .. 3088799 + -10.2 -3.02144 GAGCGGACGGCACGT GAGACGCG GGA CGCGGCTC TGTTGAGCGAGGTGC 64 46 LT409_RS13495 NONE LT409_RS13505 NONE LT409_RS13520 3095781 .. 3095796 + -4 -3.53811 GCGGGCGCGACGTCC TCGGTGG ACA CCAC-GA TTTCCACGACGTCGC 51 440 metA NONE LT409_RS13560 3103137 .. 3103149 + -2.7 -3.08977 ACTTCCTCTTTCATT TGATC CTC GATTA TGCTCTTTTTTCAGC 41 45 LT409_RS13565 NONE LT409_RS13570 3103852 .. 3103890 + -5.1 -4.4078 AGATCTAGCGGGAAC AAAACGGGGGGCGCTTC AAGTC GAAGCACCCCTCGCCTC TTTTAGTTCCAACCG 68 33 LT409_RS13585 3108063 .. 3108109 + -19.7 -3.17075 AATCCCCTCCCCTCC TG-AAAGGCCCGATCGACGCGCA TGA TG-GCGTCGATCGGGCCTTCGCA TTCGCTTGGACGGGA 91 52 LT409_RS13635 3120046 .. 3120078 + -20 -5.37345 CGGCGGCGCTCACAG GCGGCGAAGCGGCGA GAAA TC-CCGCTTCGCCGC TTTTTTCTCATTCCG 100 136 LT409_RS13640 NONE LT409_RS13645 3121275 .. 3121285 + -4 -3.75665 CCGATGATTCGTGAA TTGT TCC ACAA TTTCATCGGCTCTGC 54 196 LT409_RS13665 3124936 .. 3124958 + -11.3 -2.57132 CCACTCTATCCGGCA GCGCACCGCC ATCG GGCG-TGCGC ATTCTAGAAGAAAGG 64 165 amaP NONE LT409_RS13675 NONE LT409_RS13680 3126739 .. 3126765 + -18.7 -4.56597 CACCCCGTGTTGCAA GCCCGTCGCGC CTCCC GCGCGGCGGGC TTTTTAACGAGCGGG 100 92 LT409_RS13695 NONE LT409_RS13700 3133945 .. 3133959 + -8.5 -3.53224 CTTCGCACGTGCGCG GCGCC CATCA GGCGC TTTGCCGCAGCCATA 62 71 LT409_RS13710 3135855 .. 3135867 + -4.8 -2.94561 ACACCGTGAGTTGTC GCGT CTGCA ACGC TCCTATTTCTTGAGG 45 90 LT409_RS13755 3147062 .. 3147081 + -7.8 -4.11692 CGGCGCTGAGATTCG CCTCGGGG TCGG CTTCGAGG TTTTCGCGATAGGTG 71 246 LT409_RS13765 3149530 .. 3149545 + -6.1 -3.29144 GAGCACTTCGTTGTC GGCCA CGACGA TGGCC TTGTCGCCGGGATAC 51 310 LT409_RS13810 3158640 .. 3158664 + -20.1 -3.90112 CCCCGCATCAAGCAA GAAGGCGCGCA TGA TGCGCGCCTTC TTTCGTTGCGACGAC 100 49 LT409_RS13930 3187168 .. 3187195 + -15.6 -3.54741 AACTAGAGCAAGAAA GAGGCAGGCCGG AAAG TCGGCTTGCCTC TTTCGGAAGATGCTG 93 35 LT409_RS13955 3194170 .. 3194182 + -4.8 -2.91264 CGCGCCCCTCAGGAG GGCA CGGCA TGCC TGTATCCATGAAGGG 45 97 LT409_RS13960 3195326 .. 3195358 + -20.7 -3.16191 GCGTGGATATCTAAG TGGCGCGAAAAGGGA CAG TCCCCTTTCGCGCCA TTCGTGAGCGTATCG 95 27 LT409_RS13970 NONE LT409_RS13975 NONE LT409_RS13980 3199933 .. 3199943 + -2.4 -3.04144 CGGCTTCCGCATGAA CGCC GCC GTCG TATTCGACATCAAGC 41 465 LT409_RS13995 3204805 .. 3204821 + -12.3 -4.11216 GCCTCCACCCTCCAC CCCTCCA CTA TGGAGGG TTTTCCCAATCCACC 89 259 LT409_RS14000 3206619 .. 3206646 + -17 -3.64703 GCCTTCCCTCCCCTC ACGCCCTCTGGC TCTC GCCAGAGGGCGC TTTGCATACAAACGG 100 93 LT409_RS14010 3209625 .. 3209638 + -3.1 -3.16742 CGATCAGCTTGACGA TCTCGG TGG CCG-GA TTCGTGCCGGTTAGC 43 511 LT409_RS14020 3211622 .. 3211636 + -5.6 -3.57144 GAAGCCCGCATAGGC GGGTGC CTT GCGTCC TTTGAGGCTGACGAG 57 114 LT409_RS14030 NONE LT409_RS14035 3215586 .. 3215618 + -13.5 -3.21276 TTGCCGTGAAAGCGC GATGTCGAACAAGCC AGT GGCTTGTTCGAAAAC TGTTATCGCGCCCGA 78 102 LT409_RS14040 3216810 .. 3216825 + -6 -3.01712 GGACGCGAGCCAGGC CGCGGC GGCA GCCACG TCTTCGGGGGCGCCC 48 136 LT409_RS14050 3218389 .. 3218420 + -2.8 -3.55622 GCCACCGGCACGACG GCCTGGTCG-ACGGG CAG TCCGAGCGACGTGGC TTTCAGCAGCTTCAC 49 166 LT409_RS14070 3223005 .. 3223039 + -18.6 -2.53263 GCCCCGCACAGCAAA ACGAGGGGCGCTCG CCAAACA CGAGCGCCCCTCGC TAACTTACGCATCAG 85 327 LT409_RS14105 3236536 .. 3236569 + -17.6 -4.65895 GCCCCCTGCGACCGT C-ACGAAGCCCTCCG ACACC CGGAGGGCTTCGTCG TTTTTGGATGAGGCA 100 47 LT409_RS14115 3240675 .. 3240714 + -19.3 -3.21276 GGCGAGCTGGAAAAC GAGAACCGCCCGACCGG CTCCAA CCGATCGGGCGGTTCCC TCTTCTCGCAGGAAA 91 84 LT409_RS14120 3241579 .. 3241625 + -23.6 -2.80511 CCGGGCGGCAACGCC GCCCGGCACCCTGCGGCGCGCG CGA TGCGCGCCGCAGGGCTTCGCGC TACTTGCCTTCTGCC 100 178 LT409_RS14130 3245490 .. 3245529 + -17.9 -3.78934 TCGGCGGGCTAAAAC GAGAATCGCCCGACCGG CTTCAA CCGATCGGGCGATTCGC TTCTTCTCGCAGAAA 100 81 pxpB NONE LT409_RS14150 NONE accB 3249359 .. 3249373 + -2.7 -3.02144 CGGCGAAACGCACTA GGGCG GCGCG CGCCA TGTTCGACAAGATAC 41 25 accC 3250785 .. 3250799 + -11.4 -3.68351 CCTGGCTCGCACAAA CAGCCC ACT GGGCTG TTTGGCTCGTGCGGA 77 88 LT409_RS14165 3252279 .. 3252316 + -16.3 -3.6215 GTGAAACACTCGCAC CCAACGCCCCGCGCT CTTCACCT GGCGCGGGGCGTTGC TTTACAATAGGTTGA 93 71 LT409_RS14170 3253453 .. 3253466 + -9.5 -2.70932 GATTGCGGCGGCATC GCGCC GCCT GGCGC TACTTGGCGGCCAGC 57 357 LT409_RS14180 3257236 .. 3257255 + -7.8 -2.81464 GTCCACCTGCTTCTG CGCGCC GGCTTCGA GGCGCG TGTCCTCGGTCGTGG 52 452 LT409_RS14205 3263561 .. 3263592 + -23.1 -3.18264 CGCCTCCGACACGAA GGGCCCCTCTCGC CAAGCT GCGAGAGGGGCCC TTCCTCGGTACGCCA 100 80 LT409_RS14225 NONE LT409_RS14230 3269763 .. 3269804 + -11.4 -2.86539 AGCCCCCGCCAGCCC GCCTGCCCCCC-GCCCCGC CCGTC GTGGGGCAGGGGGGGCCGC TCCTTCTAGCTTGCG 66 51 LT409_RS14245 3274774 .. 3274788 + -3.5 -2.60508 CGGATAAGCTCCTGA CGGTT CGCCT GACCG GATTTTTGCAGGATG 39 105 LT409_RS14255 NONE LT409_RS14260 3278555 .. 3278576 + -18.7 -3.05935 TCGACTAAGCACGAA GCGCGCGCC GCTC GGCGCGCGC TTCGCTACGACGTCT 89 33 arcA 3281119 .. 3281152 + -13.2 -2.90496 TTTTCCATCGCCAAC AGCGGTTGCGCGCGA TTCGC TC-CGCGCAACCGCC TCCTTTCCCCAGGCG 75 43 LT409_RS14280 3283003 .. 3283039 + -21.7 -4.36914 AGGCGCCTGAACTAT GCAGGTAAGGGGCCCGA AGT TCAGGCTCCTTACCTGC TTTTCTACCACCAGC 100 280 LT409_RS14340 3300088 .. 3300114 + -17.3 -4.21936 ATTTCTCTGTCGGAA GCGCCCGAGGG TTCGT CTCTCGGGCGC TTTTCGCATTCTCGC 100 54 LT409_RS14365 3308162 .. 3308205 + -4.3 -3.64866 TTTGAAGTATTTGCA GCAGCCGCGCTCCGTCCGGA ATACC TCCCG-CGGCGAACGGCGGC TTTACGCTGTGGTAT 54 67 LT409_RS14370 3310948 .. 3310972 + -4.9 -3.85698 CGGCACTCCTCAGAA GCGGCCATAGC CGT GCTATACTCGC TTTCTCGCACGCCCG 59 56 LT409_RS14375 3313154 .. 3313174 + -5.3 -3.06831 TCGAGCCATCTCGAA CCCGCAG CCGAGCT CGGCGGG TTCGATCGAGCTTGA 49 57 LT409_RS14380 3313379 .. 3313411 + -16.4 -4.18018 CACTTCGCAGATGAA CGAGCTCCAGAAAC CTTGC GTTTCAGGAGCTCG TTTTGCATCGCGACC 100 39 LT409_RS14410 3322688 .. 3322725 + -21.3 -3.76968 ACCCCTCCTCCCGAA GCGCGTCGACCGGATCC CGCT GGATCGGGCCGACGCGC TTTGCTGCGTGCGTT 100 50 LT409_RS14420 3326595 .. 3326642 + -9.1 -2.70932 TCGTCGATGTTCGCG CCGCACTCGGCA-AG-CGCGGTGG CAA CCTCCGCGACGATGCCGC-TGCGG TCCTTGCCCAGAACG 56 451 LT409_RS14445 3334262 .. 3334315 + -5.1 -4.43911 TCGCGCACCTCGGTC TTACCGTACGGCTGCATGCGCTTCAG GTA CTCG-GCGCACGCAGCCGTCCAGAAC TTTTCCTTCAGCTTT 70 470 LT409_RS14485 3343047 .. 3343069 + -3.3 -3.54543 GAGGTCGACGGAGTG CCCGGCG CGGCAGGGT CGACGGG TTTCGCCGGATCAGT 49 203 LT409_RS14500 3348089 .. 3348126 + -24.3 -3.05384 GCGCGCAACAGCAGA GAACGGCTCCTCGGCAA ACCC TCGCCGAGGAGCCGTTC TTGCATGCGCAACCG 100 58 LT409_RS14510 3351706 .. 3351732 + -18 -5.0538 GGTCCTTCCCTCCCT GGCCGCGCCC TCTCTCC GGGCGCGGCC TTTTTTCAGGTACAA 100 76 LT409_RS14515 3352485 .. 3352506 + -18.7 -3.95036 GCTGCAACGACGAAA GCGGCCCCG TCAC CGGGGCCGC TTCTTTACGCTGCTT 100 107 LT409_RS14530 NONE LT409_RS14535 NONE LT409_RS14540 NONE LT409_RS14545 NONE LT409_RS14550 NONE LT409_RS14555 NONE LT409_RS14560 3363443 .. 3363483 + -26.3 -3.33696 GCTTCGGCCAGCAAC GACAACGCCCCGCAGCTTG TAA CGAGCTGCGGGGCGTTTTC TTGCTTGGACGAGAC 100 52 LT409_RS14580 3367368 .. 3367381 + -8.1 -4.55446 CCACCGCATTTCAAA CCCTC GTAA GAGGG TTTTCCTATTTCTTC 79 38 LT409_RS14615 3375068 .. 3375078 + -6.8 -3.08642 GCGGTCAATTTCTTG TCGC ATT GCGA TTGACTGCATGATAT 52 121 LT409_RS14620 3375225 .. 3375252 + -22.8 -5.10665 CGCCAGAAACGCAGC GCGCCCGGAACC AGCT GGTTCCGGGCGC TTTTCTTTGTTCGGT 100 36 LT409_RS14630 NONE LT409_RS14635 3380559 .. 3380574 + -6 -3.28791 TCCTCGTATCCCACG GGCAGC CCGA GCCGCC TTCTCAGGCGCAGCT 52 443 LT409_RS14645 NONE LT409_RS14650 NONE LT409_RS14655 3384421 .. 3384451 + -24.1 -4.00532 ATTCCGCACGAGAAA GGGCGGGAACGGC GCTCG GCCGTTCCCGCCC TTTGATGTTTACGCC 100 44 LT409_RS14670 3386322 .. 3386351 + -3.6 -5.5112 ATTTCAGCTTCTAAT TCCGCAACG-ACTG GCAG CAGCACGT-GCGGA TTTTTTATTGGTCAG 88 40 LT409_RS14675 NONE LT409_RS14680 3389273 .. 3389321 + -15.4 -4.25056 CGGCGAAAGGGCGCA GCCGCCGGGCTGCATCGACGCT ACTTGAC GGCGTCGA-GCAGGC-GGCGGC TTTCTTCCTGCAGTC 100 58 LT409_RS14690 3391007 .. 3391017 + -2.4 -3.08812 GCAGCGGGTGCGAAA ACGC CTG GCGC GTTTCTTCCGCAGCC 41 137 LT409_RS14695 3392517 .. 3392570 + -24.1 -2.83164 GCTTCGGCGGGTGCA TTATCGGCCCAAAGACACGGTTTTC GCGG GAATTCCGTGCCTTTGGGCCGATAA TGTGCTCCTCCGTCC 100 119 LT409_RS14750 3405078 .. 3405107 + -13.5 -3.6422 CTGCTTTCGAGTCTC GACGCGCGCAGCT TTTC AGCTGCGCGCTCC TGTTTTCAAGCCGTC 88 120 LT409_RS14755 3406098 .. 3406134 + -23.1 -2.57683 CAGCGATTCAGAATC TCGAAGGTCCGGCGAGC GTC GTTCGCCGGACCTTCGC ATTGTCGCCGGATCT 100 47 LT409_RS14765 3409953 .. 3409965 + -9.1 -3.33815 GGATGGCCCCGCCCT GGCAC CGG GTGCC TTGCTTCAGGGCGCT 63 106 LT409_RS14805 3419789 .. 3419818 + -4.2 -5.28176 GATGCCGTTGCCGTT GCGCACCGCCACG CTGCC CGTG-CGCTTCGC TTTTTTCTGCGTGCC 93 345 LT409_RS14820 3425135 .. 3425152 + -6.9 -3.53091 TCTTCGGGATCGTTC GCCGCGA GACG TCGCGCC TTTGGCGACAAACAT 58 84 LT409_RS14825 NONE LT409_RS14830 3426726 .. 3426783 + -21.5 -5.27335 GAATCCGCTCGTTGG CTCCAGAAAAAATGCAGGTCAGGCGAT GAGA GTTGCCTGACCTGCTTTGTTTCCGGAG TTTTTCTTTCAGCGC 100 21 LT409_RS14835 3427704 .. 3427718 + -5.6 -3.27525 GCCAGAGCAATCTGC CGACCG CTG CGTTCG TTGCGTTTGAACGGG 52 81 LT409_RS14840 3428166 .. 3428181 + -3.2 -4.05788 ACCGATGGGACTCTT CGAAAG AGGT CGTTCG TTTCGTTTGAAGGGG 59 112 LT409_RS14845 3429152 .. 3429183 + -10.9 -4.72272 TTGAGCGACTTTGAA T-CCGCGCGAAGCC CCAAC GGCTTCGCGCGCTA TTTTTACTCGCGAAA 95 37 LT409_RS14850 3430210 .. 3430224 + -2.7 -2.79878 CCCAACTTCGGCGTA GGGAC CGGAC GCCCC CTTTGCGTGCCTCGC 39 25 LT409_RS14855 3430818 .. 3430842 + -9.2 -2.53674 GTAGGACGAGCTGTC ATCCCGAGCG AGCGG CGCTCGGGGG CTGTTGATGGTTTCT 56 37 LT409_RS14860 NONE LT409_RS14865 NONE LT409_RS14870 3434128 .. 3434164 + -8.7 -3.64703 AGCGCCACTCCGTCA CGGGATCGTGCTCCGG CGGTGA CCTGGGCGC-ATCCCG TTTCGATCCGCACGC 68 51 uvsE 3435609 .. 3435620 + -7.2 -3.09933 TCGCAGCGAAAAAGG GCGC TTGA GCGC TTCGCTCGCTTGGGC 52 143 LT409_RS14880 3436194 .. 3436242 + -12.7 -2.57132 CGCAACCGACTTCCA GCGCGCAGC-CG-CCGAATGTTTC ACGT GAAACATTCGTACGTGCTGC-CGC CTTCTCAAGAAAGGA 68 41 LT409_RS14885 3437109 .. 3437132 + -15.3 -4.7254 ACCCGCACCGCACAA GGAGCCGGC AATCGC GCCGGCTCC TTTTTCATGCAAGAT 100 57 LT409_RS14910 3443870 .. 3443927 + -21.5 -3.53224 GCCGCTCTGCGAGCC CATCTTCGCCCGAAAAACACGCCACAG AGGG CTAATACGTGTTTTTCGGGCGAAGATG TTTCCCGGCGAGGTC 100 45 LT409_RS14915 3444979 .. 3445004 + -9.1 -3.54459 CCTGCCGAGCTCTGT TCCGTTGTTTC ACGT GAAACAACGCA TTTCGAGAAGCTTCG 66 68 LT409_RS14920 3447573 .. 3447584 + -5.8 -2.62735 TGTCTGATCCCCGCA TGCG AAGG CGCA TGGTGTCCACCATCT 45 476 LT409_RS14955 NONE LT409_RS14960 3458965 .. 3459004 + -21.4 -2.52635 GCACGGGTTGAACTA GCCGCCATCGCGCCGCCGC CCA GCGGCGGCGCGAAG-CTGC CTTCGTACTGGCGCT 100 25 LT409_RS14980 3462637 .. 3462653 + -3.7 -5.0916 GCGCCCTTCCGAACA TCATCCT CAG AGGATTA TTTTTCTATTACCCC 80 178 LT409_RS14985 3464940 .. 3464950 + -5.4 -3.72363 CGAAAAACTTACAAA TACG GGT CGTA TTTCCGCTTTGGGTA 60 475 LT409_RS14990 NONE LT409_RS14995 NONE LT409_RS15000 NONE LT409_RS15005 NONE pknB 3473141 .. 3473164 + -18.2 -5.28778 GAACTAGGAATCTCC GCGATGCGCC TTCG GGCGCATCGC TTTTTTATGCGTCCT 100 34 LT409_RS15015 3473327 .. 3473345 + -13.8 -4.44667 CATCTGATCGCAAAA CGGCGCCT CTC GGGCGCCG TTTCTTCTTGCAAGC 100 39 LT409_RS15090 3491129 .. 3491166 + -27.3 -3.53712 CCTGATCAACAATGC GAAGCCCCCGATGTTTC ACGT GAAACATCGGGGGCTTC TTCGTTATTCCAGAT 100 127 LT409_RS15120 NONE LT409_RS15125 3499323 .. 3499338 + -6.2 -3.794 CGGCGAAGGCACGAA TGTTTC ACGT GAAACA TTTCATGACTTGAAA 60 92 LT409_RS15130 3500421 .. 3500454 + -26.9 -3.04322 ATCGGCGCCGCAACA CGTAAACGGCCCGGC AAAT GCCGGGCCGTTTACG TGTTGCGACCTTGCG 100 130 LT409_RS15180 3510792 .. 3510820 + -7.3 -2.71144 GATCCACATCCACCA CCCGCTTGCCG CAGATCT CGGCGGGCGCG TAGTTCGGCACGATC 51 274 galE 3514145 .. 3514155 + -2.4 -3.85864 AGACCGAATCCTCGA CGCG GCC CTCG TTCTTCTCGTCGTAC 54 39 LT409_RS15205 3518393 .. 3518425 + -5.5 -4.56597 CCGTCGCTGCGGTGC GACACGCGCGCTTTT ACT AAGAGCGGGCATCTC TTTTTCGCAGCACCG 74 6 LT409_RS15225 NONE LT409_RS15230 3521800 .. 3521849 + -11.9 -3.0644 AGCGCCTGGTCGAAG GGAGGCGAGCTTCCG-CGACCGCG CGC CGCGGGCGGCGAAGGCGCGCGGCC TCTTCCGAATTCGAT 68 184 LT409_RS15260 3530322 .. 3530348 + -9.4 -3.17527 CCGAGCCTAGCGGGC CGGC-GCGGCG CCCTCT TGCCGCTGCCG TCTTGCTCGTGCATC 61 31 LT409_RS15275 3534465 .. 3534513 + -4.4 -4.27617 GATCGTTGCCAAAAG TATACGAACACCAGCCGATCTC AGCAA GAGTTCGGCAAGCGGTCGCATA TTTTCCTCCGATCTC 65 199 LT409_RS15280 3536041 .. 3536054 + -9.5 -3.53012 AGGCGTAAATCAGAC GCGCC ACCC GGCGC TTTGCGCAGAACACG 66 33 LT409_RS15285 NONE LT409_RS15290 NONE LT409_RS15295 NONE LT409_RS15300 NONE LT409_RS15305 NONE LT409_RS15310 NONE LT409_RS15315 3543876 .. 3543926 + -8.9 -3.66921 GGCGCGAAGTAGAAG GATCCCGTGCGGCGCCAGCCG CAGCACTCC CTGTTAACGCAGCACGGGATC TTTCGACTTCGGCTT 68 155 LT409_RS15320 NONE LT409_RS15325 3545933 .. 3545955 + -16.2 -3.61356 ATGCCCTGGAGAGAG GCGGCCCCCC TTC GGGTGGCCGC TTTCGCCTCCGTGAT 93 271 LT409_RS15330 NONE LT409_RS15335 NONE LT409_RS15340 3548435 .. 3548452 + -12.7 -4.3129 AATGCAAAAAAAAAA GGACGGC TAAA GCCGTCC TTTTCGTCATCAGTG 100 355 LT409_RS15365 3557169 .. 3557210 + -13.9 -4.20516 GCGTTCTAGTCTTTC TTCAGGAGTGGAATGTTTC ACGT GAAACATTCCACTCCTCCG TTTATTAACTGAGGG 100 32 rlmN 3559333 .. 3559372 + -26.8 -4.10453 CGTATACAAAAATAA GAAAGCCCGGAATGTTTC ACGT GAAACATTCCGGGCTTTC TTTTGGGAACCTTTC 100 99 LT409_RS15390 3562197 .. 3562251 + -19.7 -4.56597 TCCGCGTAAGGTTAG CGCTAGATTCTAATGCAGAATGTTTC ACGT GAAACATTCTGCATTAGAG-CGGGCG TTTTTGCGCGAAACC 100 160 LT409_RS15425 NONE rpmH NONE rnpA NONE yidD NONE LT409_RS15405 NONE LT409_RS15400 3563258 .. 3563289 - -11.6 -4.93696 GTGAAACACTAAAAA CAAAAACCCGCACC TTTC GATGCGGGTTTGCG GCTAAACCGAGACTT 100 47 rsmG 3562214 .. 3562235 - -10.3 -2.54523 CTAGATTCTAATGCA GAATGTTTC ACGT GAAACATTC TGCATTAGAGCGGGC 60 30 LT409_RS15385 NONE LT409_RS15380 3559330 .. 3559375 - -25.1 -4.99638 ATACGTATACAAAAA TAAGAAAGCCCGGAATGTTTC ACGT GAAACATTCCGGGCTTTCTTT TGGGAACCTTTCGAC 100 43 LT409_RS15370 3556880 .. 3556890 - -2.4 -2.63382 TTTCATAGCTACAAC GGCG CAG CGTC TTTCCGATGGCGTGC 38 350 LT409_RS15360 NONE LT409_RS15355 NONE LT409_RS15350 3548748 .. 3548762 - -4.9 -4.60041 AGGCAGGCTGAAAAA CGCCC GCCGA GGACG GATAGGGGCACCTAT 73 37 LT409_RS15345 3548435 .. 3548452 - -12.7 -6.40073 AATGCAAAAAAAAAA GGACGGC TAAA GCCGTCC TTTTCGTCATCAGTG 100 50 LT409_RS15270 3532286 .. 3532304 - -3.8 -3.71527 TGGGAAGGAGGTAAA CCGTCGG AGCCCG CCG-CGG TCCTAGGGCACGATC 54 28 LT409_RS15265 3530296 .. 3530336 - -13.3 -3.09516 CGCGTGACCATGGAA GAGGAAGCCGC-CCGAGCC TAGCG GGC-CGGCGCGGCGCCCTC TTGCCGCTGCCGTCT 76 172 LT409_RS15255 NONE LT409_RS15250 3525022 .. 3525044 - -9.8 -3.05384 TGTTCCGGCACCGAA CGCGCCGGAT CGA ATCCGAAGCG CTACTGCTCGCTGGC 64 26 LT409_RS15245 3524318 .. 3524333 - -3.2 -2.63596 CTCCACGTCAGATCA CCCCTG CCTT CAGGAA GTGCTTCCTCATCAG 40 2 LT409_RS15240 NONE LT409_RS15235 3521967 .. 3522000 - -12.4 -4.4648 ATCCTTACGAGAAAA CGGAACGCCCGGACG GGCGG CACCCGGGCGC-CCG GATGTTTCACGTGAA 100 70 LT409_RS15220 3519583 .. 3519600 - -9.9 -4.98531 TCGCTAAATGAAAAA TCCAAGC CGAA GCTTGGA TCGTAGGTTCATGGA 100 37 LT409_RS15215 NONE LT409_RS15210 3518189 .. 3518199 - -8.2 -4.35461 GCAACATCACGAAAA CGCG CCT CGCG CTCATGGTGAGCATA 80 235 LT409_RS15200 3516107 .. 3516132 - -12.6 -4.7373 GGAGCCGATTAAAAA GCGGCATCGA TCGAAG CCGATGCCGC TTGCGCAGTTCGAGG 100 59 LT409_RS15195 3513972 .. 3513995 - -13.8 -3.29471 GCCCTACCAGATCAA GCCGCGTCGC GCGG GCGACGTGGC CGTGAACTACGCGGC 78 158 LT409_RS15185 3510548 .. 3510575 - -9.1 -3.97088 TCGGAGAATAGGAAA CGCCCCGAAAGC TCGAT GCCC-CGGGGCG TTCTGCGTACAAATG 73 72 LT409_RS15175 3509697 .. 3509719 - -5.6 -2.61383 ATGGCCACCGAGAAG CGCATGAG ATCGTTG CTCATACG TGCGGCGCCTACACG 46 34 nikR 3509219 .. 3509236 - -4.1 -4.29326 GGGAAAGCGAACAAA TGGCG AGACCGGG CGCCA CGGGAAGCCGCAGCG 65 83 hypE 3507822 .. 3507838 - -6.5 -3.53012 TCCTTCTCGTCTAAA GCATTCC GAC GGGATGC GTCGGGTCACTTCCC 58 232 LT409_RS15160 3507544 .. 3507575 - -14.5 -3.75153 TTTCCCGAACGCAAA GAACCCCCGCCTC ATGAAA GAGACAGGGGTTC TCGTTGCGCTTGTCG 93 61 dnaK NONE LT409_RS15150 3504560 .. 3504585 - -7.6 -4.58773 TCGAGTAAACCAAAA GCGGGC-A-GCC TCTT GGCCTTGCCCGC TCTGGTCGTTTGCTT 81 41 LT409_RS15145 NONE LT409_RS15140 NONE clpB 3500421 .. 3500454 - -26.9 -3.01791 ATCGGCGCCGCAACA CGTAAACGGCCCGGC AAAT GCCGGGCCGTTTACG TGTTGCGACCTTGCG 100 70 LT409_RS15115 NONE LT409_RS15110 3493577 .. 3493608 - -10 -3.79419 TTTGGTGATAAAAGA GGCGCTCCTAACCC ATCG GGGAAAGGAGCGCA AACACTAAACCCAAA 76 152 LT409_RS15105 3492271 .. 3492314 - -16.8 -3.14211 ATCCCTGTTCAGCAA TGCGAAGCCCCCGATGTTTC ACGT GAAACATCGGGGGCTTCTTG CTTTGCGGCGACGTC 89 73 LT409_RS15100 3491523 .. 3491538 - -3.2 -3.03338 ATAATCTCCTGAAGA CGGGAT AGTC ATCGCG CTTCGCGTTCATAAA 43 18 LT409_RS15095 3491126 .. 3491169 - -16.8 -3.71848 GCCCCTGATCAACAA TGCGAAGCCCCCGATGTTTC ACGT GAAACATCGGGGGCTTCTTC GTTATTCCAGATCAA 100 27 LT409_RS15085 NONE LT409_RS15080 NONE LT409_RS15075 3487090 .. 3487106 - -5.1 -3.18264 CCTTCGAGTCACGAA CAGCG CGCCTAC CGCTG CCGTTCCCTCAGCCA 48 17 rsgA 3486057 .. 3486067 - -3.2 -3.34398 CTCGTTGCTCAAAGA GAGA AAA CCTC AGCGCTTCTTGCGCG 47 24 LT409_RS15065 NONE LT409_RS15060 3483339 .. 3483360 - -3.6 -3.75153 CTGGCGTAATGCAAA GGCGGCTCG TCCAG CG-GCAGCC GGGAGTCGCATTTTG 54 170 LT409_RS15055 NONE LT409_RS15050 3479711 .. 3479733 - -9.1 -4.56597 TCTTCGCCCCAAAAA CACGCCACA GCGCG TGAGGCGTG TTTTTGGGGCGAAGA 84 98 LT409_RS15045 NONE LT409_RS15040 3478131 .. 3478173 - -17.9 -3.7941 GACGTTCGACAACAA GAAGGCCTGAAAAC-GCGCC CAAG GGTGCAGCTTTCAGGCCTTC GATTATGCACGATGC 100 146 LT409_RS15035 3477230 .. 3477267 - -19.9 -4.39166 GGTCATATATTAAAA GAAAGCAGGCGCGGCTC ACGC GTTCCGCGCCTGCTTTC CCGCTAGCGGGCTAC 100 29 LT409_RS15030 3475710 .. 3475720 - -2.4 -3.03124 CCCGATCTCTCAACA CGCG AGC CGCT CAACTGCACGCCATC 41 102 LT409_RS15025 NONE LT409_RS15020 3473327 .. 3473345 - -13.1 -4.14243 CATCTGATCGCAAAA CGGCGCC TCTCG GGCGCCG TTTCTTCTTGCAAGC 89 64 LT409_RS14975 NONE LT409_RS14970 3460255 .. 3460285 - -19 -3.51232 GGGGCCCGAAAGGAA CCCGGGCCCGCAGA TCG TCTGCAGGCCCGGC GGGAGGGAGGCAATA 100 62 LT409_RS14965 3458965 .. 3459004 - -23.6 -2.71364 GCACGGGTTGAACTA GCCGCCATCGCGCCGCCGC CCA GCGGCGGCGCGA-AGCTGC CTTCGTACTGGCGCT 100 71 LT409_RS14950 NONE LT409_RS14945 NONE nrfD 3450553 .. 3450607 - -20.1 -2.85351 GGGTGCCACAGCAGA CCGCAGCGTCGGCCGTTCCGTCGTTC GTCA GAACGACGGAAC-GCCGATGACGGGG CTTCCCTGCCTTGCG 95 180 LT409_RS14935 NONE LT409_RS14930 NONE LT409_RS14925 3447465 .. 3447503 - -18.9 -3.54146 CTCCGCAACGAAACA GCCCCGCCAACCGGA GGAGGGGGT TCCGGTAGGCGGGGC TTGGGCACAGCGCTC 100 66 LT409_RS14905 3440390 .. 3440410 - -12.5 -3.55548 GAAGACGGGCGGAAA CGCACGCCG CCC CGGCCTGCG CAGACCGGGGCGGTT 79 157 LT409_RS14900 3438219 .. 3438265 - -8.1 -3.64703 CGGTGGCGATCGAAA GCTCG-CG-AGGCA-CGGCGAG GAATAG CTCGCCGGTGCCCACGTCGATC CCGGTGCGAAACGAC 64 295 LT409_RS14815 3421086 .. 3421096 - -8.2 -4.30576 GGTTTACTAGGAAAA GCCC ACA GGGC AGCGCAGCGGAAGCG 77 91 LT409_RS14810 3419084 .. 3419114 - -4.6 -3.70417 ACGACACTATGGAAA GCCGCGGCGG ATTCTGGCTTG CTGCCGCAGC ACTGGTAACGGCCAG 58 448 LT409_RS14800 3417770 .. 3417786 - -2.2 -4.30719 CGCCCGCACAACAAA GGCTTC TTATC GAAGCG AGTGAACATGATACC 63 69 LT409_RS14795 NONE LT409_RS14790 3416930 .. 3416945 - -6.8 -2.87647 AGCGAGCACATCATA GCGCAA GCAA CTGCGC CTCGCTCCGCCCCAA 51 53 LT409_RS14785 3414636 .. 3414651 - -3.2 -3.41961 ACGACGAGCAATCAA GCGG GGGGCCAA CCGC TTTCGCGAGTTTACG 49 36 LT409_RS14780 3413512 .. 3413539 - -21.4 -2.52896 CGAGCCCCGAACGCA TCGTAGCGCGCC CGAA GGCGCGCTACGA AAGGAAGCACCGCAA 100 113 LT409_RS14775 NONE LT409_RS14770 3409884 .. 3409910 - -18.7 -3.85909 CTAGGGAAACTCAAA GCCCGCGCGCC GGGGA AGCGCGCGGGC CACAGGAGAATCGGG 100 96 LT409_RS14760 3406096 .. 3406136 - -16.1 -3.36878 CGCAGCGATTCAGAA TCTCGAAGGTCCGGCGAGC GTC GTTCGCCGGACCTTCGCAT TGTCGCCGGATCTAG 89 144 LT409_RS14745 NONE serS NONE LT409_RS14735 NONE LT409_RS14730 3398921 .. 3398945 - -3.5 -2.58822 CCGTCCACACAAGAG CGGCTA-GCG TACCAT CGCATCGCCG AGGAAGGCAATCGCA 40 4 LT409_RS14725 3397839 .. 3397854 - -8.2 -3.08679 GTTGCCGACCGAACA GACGCG AAGA CGCGCC GCCGGCCTACGGCCC 56 74 LT409_RS14720 3397121 .. 3397166 - -4.7 -3.20382 TCGGACAGTCAGGAA GCGGCGAG-AGG--GGCG-GGGC TTGC GCCCACGTCGACCAACTCGCCGC TTCATGATAGATGCG 48 45 LT409_RS14715 NONE LT409_RS14710 3395231 .. 3395241 - -6.8 -2.52623 GTTTCGTCACAATAC CGTC AAC GACG TTCAGCATTTCTTAA 48 76 LT409_RS14705 3393948 .. 3393975 - -12.8 -3.41878 TGCGCGAAGCGAGAA CCCGGATGTTTC ACGT GAAACATCCGGT CGCGCGAAGCGCGAA 79 269 LT409_RS14700 3392731 .. 3392758 - -22 -3.64703 GCGCCTTCATGCAAA GCGGGGCCGCCC TTTC GGACGGCCCCGC CGAGGTGCGCGATTG 100 66 LT409_RS14685 3388779 .. 3388812 - -8 -3.1355 GGGATCGAGATCGAA TCGGCCGCCGACGCG GCGCG CGCGCTGGCG-CCGT TCGCCGGGCACTACG 55 506 LT409_RS14665 3384929 .. 3384941 - -4.7 -2.78384 CTTTCCCGCAGTATA GCGGG GGG CGCGC TACTCCTGCACGCTC 43 25 LT409_RS14660 3384421 .. 3384451 - -24.1 -3.96327 ATTCCGCACGAGAAA GGGCGGGAACGGC GCTCG GCCGTTCCCGCCC TTTGATGTTTACGCC 100 34 LT409_RS14640 3380358 .. 3380374 - -5.7 -4.21676 ACAAGGTACTGAAAA CGCCGCG CTT CGCAGCC TTCGATCAATCCGTT 68 185 LT409_RS14625 3375734 .. 3375764 - -15.4 -4.85782 CTTCGCAAAAAGAAA CGCGCTCCTCGCCC GTT GGGAAAGGAGCACG TTGTTCATTGGAGTG 100 160 LT409_RS14610 NONE LT409_RS14605 NONE ispE 3370673 .. 3370684 - -5.8 -2.52676 GATTTCGCGAATGCA TCGG GCTG CCGA AATTTCAGCGGTTCG 45 30 LT409_RS14595 3369961 .. 3370006 - -6.2 -4.19704 GAACCCTACGCAAAA TAGTTTTCGACGAGCGCCGCGC AGAG ACGCGACGCTCGTTG--AACTT GGCTAGAACTGCACC 68 28 LT409_RS14590 3367752 .. 3367770 - -3.1 -3.09505 ACAGTCGAGCGAACA CGGAAAG TGCTC CTTTCCC AGGTCGGGATGCACG 43 116 LT409_RS14585 3367368 .. 3367381 - -8.1 -3.60627 CCACCGCATTTCAAA CCCTC GTAA GAGGG TTTTCCTATTTCTTC 64 31 LT409_RS14575 3365158 .. 3365180 - -14.1 -5.252 TACGCGCACAAAAAA CGCGACCCC TTGCC GGGGCCGCG TTCGTTCCTGCCTGG 100 42 LT409_RS14570 NONE LT409_RS14565 3363448 .. 3363478 - -22.6 -3.54029 GGCCAGCAACGACAA CGCCCCGCAGCTTG TAA CGAGCTGCGGGGCG TTTTCTTGCTTGGAC 100 145 LT409_RS14525 NONE LT409_RS14520 3352485 .. 3352506 - -18.7 -3.84246 GCTGCAACGACGAAA GCGGCCCCG TCAC CGGGGCCGC TTCTTTACGCTGCTT 100 30 LT409_RS14505 3348084 .. 3348130 - -26.9 -3.04322 GTCAAGCGCGCAACA GCAGAGAACGGCTCCTCGGCAA ACCC TCGCCGAGGAGCCGTTCT-TGC ATGCGCAACCGGTTC 100 46 LT409_RS14480 NONE LT409_RS14475 NONE LT409_RS14470 NONE LT409_RS14465 3336265 .. 3336296 - -3.1 -3.01791 ACCTTTTGGCGAATA GCAAACCATGCATT TACAT AATGCCT-GTTCGC CGTTTCCCACTTGCC 43 86 LT409_RS14460 NONE LT409_RS14455 3334429 .. 3334442 - -3.8 -3.77831 TTACCAAGACGGAAA CGAG ATCGGA CTCG TGCGCTATCTGACGG 54 30 rlmH 3333605 .. 3333624 - -4.9 -3.9279 ACGCAACTTGACAAA GCGCCTG CAAACC CAGGCGA TGACCCCGCTGATCC 60 287 LT409_RS14440 3329320 .. 3329371 - -12.2 -3.29461 CAACTTTCGGGACAA GGGCAACCGCAGCTCGAACGCCCC AGAC GGAGCATTCGAGCTGCAAGCGATC CTACAGCTCCAGCTC 76 26 folE 3326722 .. 3326737 - -6.2 -3.34895 CTGATTGCGAACGAA TGTTTC ACGT GAAACA ATCGCGATGGCCCTT 52 53 LT409_RS14425 3326182 .. 3326215 - -16.3 -4.26076 TGACCTCCACGAAAA TGTCCTAAAAAGGAA TCTG TTCCCTTTTAGGACA TCCGTAGCGTCGAAG 100 215 LT409_RS14415 3322821 .. 3322852 - -18.8 -5.0538 GCGCACGCGAAAAAA TGCGGGTGCAACAC TCTT GCGCTGCACCCGCA TCAGGGAGGGGATGA 100 54 LT409_RS14405 3319127 .. 3319148 - -5.9 -3.22448 GGAAATCCAATGCAA GAATGTTTC ACGT GAAGCATTC CTCTGCGCTGCGGGA 50 105 LT409_RS14400 3317578 .. 3317600 - -5.4 -4.07568 TCTTCGCTCGGAAAA CACGCTCCCG GCG CTGAGGCGTG TTTTTGGAGCGAAGA 65 103 LT409_RS14395 3315771 .. 3315808 - -7.1 -4.86731 TCGCTCGAAACAAAA CGGGCCGCTTCTGC AAGAGGGATGA GCAGAAGCGACC-G TCAACGGAATAGCTT 85 89 LT409_RS14390 3315400 .. 3315414 - -3.4 -3.12668 CGTCAAAGGGTAACA CGATCG AAG CGGCCG AATTGTCGGGAACGC 45 42 LT409_RS14385 3313832 .. 3313846 - -11.4 -3.61398 GCCGGCTCGCAAGAA GCGCAC GCA GTGCGC CGCTGAGTGGCGGCG 77 198 LT409_RS14360 3304096 .. 3304138 - -25.1 -3.64822 ATCTGTTGACCGAAA CG-CCAAGCGACCCCACGCA CGCA TGCATGGGGTCGCTTGGACG AAAACCCTTCATCGG 100 91 LT409_RS14355 NONE LT409_RS14350 3301396 .. 3301410 - -5.6 -3.68827 CATGGATCACCGAAA CCGGCC AAA AGCCGA AAGATAGGAGCAAGC 57 90 LT409_RS14345 3300575 .. 3300595 - -10.3 -5.26119 GTGCCAAAAAGAAAA GGGCCGACG ATT CTCCGGCCC TTCGAGGTTCGTTAT 100 52 LT409_RS14335 3297248 .. 3297273 - -17.6 -2.52464 GTGGCCTTCAATCTA CGAGGGCGGC TCGACG GCCGCCCTCG GGGTGTAACGCTATC 83 59 LT409_RS14330 NONE LT409_RS14325 NONE hypD 3292966 .. 3293000 - -23 -3.10901 AAACATTCGAAGATA GTCCGAAGGACCCCTC GAC GAGGGGTCCTTCGGAT GCTGCAGCGCCTGTT 100 47 LT409_RS14315 3291237 .. 3291269 - -14.1 -4.70319 TTATGAAAAGGAAAA GGGGATCCGGAATGC CTT GCAAACCGAATCCCC TTTCTTTTTACGAAG 100 81 LT409_RS14310 3289897 .. 3289925 - -20.3 -3.59979 GCTTCTCAGCGGAAA GGCGTGCGCCCGA GAA CCAGGCGCACGCC GCCAAACCTACTGCA 100 33 LT409_RS14305 3289159 .. 3289195 - -11.7 -4.07568 GCCCTGCCCCGAAAA GGCGTGGAGCCCGTTT TGCAGC AAACGGGCTCCAC-CT AAAATGCCTCGTGAA 84 116 LT409_RS14300 3287596 .. 3287625 - -19.3 -3.09516 CGTCTCATGAGCGAA CGCCGTCCGGACC AGCA GGTCTGGACGGCG CCCGTTTGTATCAGC 90 67 LT409_RS14295 3286875 .. 3286908 - -26.1 -4.08557 GGCTGGAAAGAAGAA CGGCGACGGGAGGGC GTTC ACCCTCCCGTCGCCG AAACGTGAGTTGCTG 100 65 LT409_RS14290 NONE LT409_RS14285 3282608 .. 3282653 - -16.1 -3.53012 GTGGCCTTCTCGAAA GGCGAGCCCGTCGACCGCGACA ATC CG-CGCAGCCAACGCGCCCGCC GGCATCGCGTGCTGC 90 429 LT409_RS14275 3281120 .. 3281151 - -16.7 -3.04144 TTTCCATCGCCAACA GCGGTTGCGCGCGA TTCGC TC-CGCGCAACCGC CTCCTTTCCCCAGGC 87 87 LT409_RS14265 3278548 .. 3278584 - -21 -3.15544 CGCCAGTTCGACTAA GCA-CGAAGCGCGCGCC GCTC GGCGCGCGCTTCGCTAC GACGTCTTCCAGAAG 100 22 LT409_RS14250 3274570 .. 3274583 - -8.1 -4.12188 TCAGCATGCTGAAAA GCTGG CTGG CCAGC GACCGCCGCGAGTCC 71 179 LT409_RS14240 3271385 .. 3271398 - -4.5 -3.65812 GCCCTCGTAATAGAA CGGCT GATC AGCCA ACGTGCTCACCTGCA 54 316 LT409_RS14220 3264958 .. 3264984 - -2.3 -2.70932 GCTGGGTGTCAATCA CCATG-CCGTAA CGTT TTTCGGTCATGA TCTCCTCCTTTACGC 39 35 LT409_RS14215 NONE LT409_RS14210 3263561 .. 3263592 - -23.1 -3.25823 CGCCTCCGACACGAA GGGCCCCTCTCGC CAAGCT GCGAGAGGGGCCC TTCCTCGGTACGCCA 100 47 LT409_RS14200 3259920 .. 3259939 - -4.8 -3.20808 TTTAGCAGAATAAAG GTCCCGCG TATA CGCTGGGC TTATAGAGCGGCCAA 48 70 LT409_RS14195 3258517 .. 3258550 - -21.7 -3.53761 CAACCTCCCTCGAAA CACGTGCGCCCGCCG AAAC CGGCGGGCGCACGAA CGCTCATAACCTCAT 100 58 LT409_RS14190 NONE LT409_RS14185 3256822 .. 3256859 - -11.3 -2.71144 TAGCGCCCGGAAGCA TGCGAGCGCCCGTATTC GGGC GAATACGGGCGCTATGA CGGGCCGGCTAGCGC 65 45 LT409_RS14175 3253354 .. 3253391 - -17.1 -4.09685 CTCGATTGCGCAAAA CGGCCCCGCGCAA GAGAGGGAAGGG TTGCGCGGGGCCG GGCGAATGAGGGGCC 100 100 LT409_RS14140 3246083 .. 3246094 - -3.6 -2.73483 ATTGTACCCCAAGCA GCAC CTCC GCGC GCCGCCGAACGCTAC 41 37 LT409_RS14135 3245489 .. 3245530 - -17.3 -4.07568 TTCGGCGGGCTAAAA CGAGAATCGCCCGACCGGC TTCA ACCGATCGGGCGATTCGCT TCTTCTCGCAGAAAA 100 89 LT409_RS14125 3241482 .. 3241517 - -17.7 -3.01924 TAGCGCCGTGCAAGA CCAAGGCCGCTCG GGGAGGGAGG CGAGCGGCCTTGG GCGGTACGGTACAGG 89 133 LT409_RS14110 3236893 .. 3236904 - -2.2 -5.31275 TGGCATTATAAAAAA CGCCG TTC CGG-G CTTGCGGAATTTGGG 85 212 LT409_RS14100 3234655 .. 3234687 - -19.2 -5.45802 TCGGCAAAACAAAAA GCCGGCAACGACGGC CGAA GCCG-CGTCGCCGGC CCTTCACGGCAAGCC 100 42 LT409_RS14095 3233035 .. 3233071 - -14.4 -4.4078 TGCGGGGAACGAAAA CGCGAACGGCCGCGGCA AATA CGCCGCGGCCGTCC-CT TCAATCAACGAATGC 100 45 LT409_RS14090 3231918 .. 3231934 - -3.7 -4.18197 AGCCGTTAGGGAAAA GTAACTT CAA AAGTAAC TTCAATTGTACGACA 62 111 LT409_RS14085 3227413 .. 3227441 - -10.2 -3.05769 CGGGGAAACGAGACA CGCC-GGGCGCGC TGGA GCGCGCCGTGGCA TCTTCGATTCTAGCG 64 129 LT409_RS14080 3225298 .. 3225335 - -10.6 -3.40403 CGGCGCCTATGACAA TTTCGAGGGCGCATTG TGTATG CTATGCGCCCTCAAGA AACGGAAACCCCAGG 68 138 htpG 3223006 .. 3223038 - -22.8 -4.34402 CCCCGCACAGCAAAA CGAGGGGCGCTCGC CAAAC ACGAGCGCCCCTCG CTAACTTACGCATCA 100 142 LT409_RS14065 3219823 .. 3219836 - -2.3 -2.58663 ACGTACGTGTACAAC GTCGT TCAT ACGTC CTCCTATCTTTCGGT 38 94 LT409_RS14060 NONE LT409_RS14055 3218253 .. 3218263 - -5.4 -3.72576 TGGTGGGGTAGGAAA CATC GGG GATG GCGATGGGATTCTAT 60 72 LT409_RS14045 3216204 .. 3216223 - -10 -3.63515 GCTGACCTCGAAGAA GC-CCGCGA ACA TCGCGGCGC GCTGCACCGTGTTCG 71 510 LT409_RS14025 3211292 .. 3211316 - -4.3 -5.00616 TGCCCGCTGAAAAAA TCTCGCAAG CGCGCAT CCTGCAAGA CCCGGTGGGTCTGAT 82 205 LT409_RS14015 3209342 .. 3209392 - -23.3 -3.55444 GGCGCACGCGTCAAA GCCGTGCGGGTGCGGCGGATCCC TGTCC AAGCTCCGCCGCACCCGCACGAA ACGCCCGCGAATCAC 100 118 LT409_RS14005 3206542 .. 3206558 - -15.1 -2.73875 GGCTCTGGAATACTA CGGCGCG TAA CGCGCCG AACGCCCGGGAGCCG 77 218 LT409_RS13990 3200570 .. 3200591 - -5.8 -3.54424 TTGGACGGTGCGAAA GCTTCGCG AACCGA CGCGAACC GACCTCCAATATTCC 55 406 LT409_RS13985 3199196 .. 3199217 - -7.1 -3.03124 GCGCATCGGCGAAGA GGCCGGCGC GGGC GCGACGGGC ACGGGCGGCTGGGCT 50 514 hcp 3195430 .. 3195472 - -15.9 -3.53091 AGCTCCGCTTTGAAA CGTTCCGTAGTTTTCTCAA ACCAA TTGAGAAAACTACGGAATA CCCGCCGGATTCTCA 93 95 mazG 3192287 .. 3192300 - -8.1 -3.14211 ATGGGCGTCGATCAA TGCGC GCAC GCGCA CGTTGAATCCGCTGC 57 306 LT409_RS13945 NONE LT409_RS13940 3188239 .. 3188251 - -2.6 -4.1466 ACGGAAGTCGCAAAA GACC CTAGC GGCC GTGGACGCAGATGCG 60 17 LT409_RS13935 3187168 .. 3187195 - -12.7 -4.3078 AACTAGAGCAAGAAA GAGGCAGGCCG GAAAGT CGGCTTGCCTC TTTCGGAAGATGCTG 100 102 LT409_RS13925 3184719 .. 3184738 - -7.8 -3.60098 ATGTTTCACGTGAAA CATTCCGG CCGA CCGGGATG CGCGCCGCCCCACGA 64 335 LT409_RS13920 3182992 .. 3183041 - -10.3 -2.71011 ACGGGCTGCGAACCA GGGCTCGCGGCTCGCGGGCCGCG CGCT CGCGGACCTCGGGCTGCGGGCTT TGCCCGAGCGGGGCG 61 45 LT409_RS13915 NONE phnC NONE LT409_RS13905 NONE LT409_RS13900 3178574 .. 3178584 - -6.8 -3.14132 GGTGGTGCCCACCAA GCGA GTT TCGC AGCGAAGCGAGGACT 54 105 phnG NONE phnH NONE LT409_RS13885 NONE LT409_RS13880 NONE LT409_RS13875 3173676 .. 3173691 - -9 -3.23638 TGAAAGACCGAGGAA GCGTAC TTTG GTACGC GACGAGGGCTTGGAG 61 93 LT409_RS13870 NONE LT409_RS13865 3171351 .. 3171404 - -4.3 -3.32993 GGATTGATACACCAA CTTTCGGGACGCTACCACGTTGCGC GACC GCGCAAGGCGCCGCCGCCACGAAGG TCGTCGCCGCAAGGG 49 147 LT409_RS13860 3169751 .. 3169773 - -3.3 -3.34043 TGGACTATGCGAGAA GTCGGGGCA TGGTT TTCCACGAC CAGGCGTTTTGCCAG 47 190 LT409_RS13855 3168590 .. 3168609 - -10.7 -5.00616 GGGCGCGCGAAAAAA CGCCCCT CGGATC AGGGGCG TTCGGAGAAGTCGAT 100 282 LT409_RS13850 NONE LT409_RS13845 3166415 .. 3166427 - -6.9 -3.07816 GGTTGATTTACTGAA GCCAC TTG GCGGC AAGTTCGTCGTACTT 52 5 LT409_RS13840 NONE LT409_RS13835 3164102 .. 3164147 - -13.9 -3.33361 TAGCAAGGAGACTAA CGGCTGACACCGTGCGGGATC CTTC GATTCCGCACGGTGCGCTCCG TTCAGGATGACAAAG 81 107 LT409_RS13830 NONE LT409_RS13825 NONE cydB 3159798 .. 3159823 - -20.5 -3.8766 CGACAGTATAGCAAA GGAGCCGTCGG ATTT CCGACGGCTCC TGGCAGTTCGCTTCT 100 62 LT409_RS13815 3158640 .. 3158664 - -20.1 -3.39895 CCCCGCATCAAGCAA GAAGGCGCGCA TGA TGCGCGCCTTC TTTCGTTGCGACGAC 100 97 LT409_RS13805 NONE LT409_RS13800 3155455 .. 3155481 - -5.8 -3.69395 GGCACGACCGAAGAA GGGCTCTCGGC ACTGCG GCCG-GAGCCG GTACTTCGAGCGCCT 57 74 LT409_RS13795 3154570 .. 3154602 - -9.7 -3.29461 CAACTCCTTCGACAA GCGGACGATGCGCAA CCT CTGCGCTTTGGCCGC GCGGAGAGGCGCTTT 63 103 LT409_RS13790 NONE LT409_RS13785 3151916 .. 3151926 - -8.2 -2.9155 TCGTTGAACAGCACA CGGC CCA GCCG CCGAAGCGGTTGACA 55 266 LT409_RS13780 3151044 .. 3151064 - -11.8 -3.70007 ACGATGGAAAAGGAA CCGCCGGC TCGTG GCCGACGG AACGTTTAGATCATC 77 31 LT409_RS13775 NONE LT409_RS13770 3149276 .. 3149314 - -10.3 -3.05384 GCGGGGCGGAGCGAA GCGACCCGCCCATGCGCCC GCA GGGCGCATAT-CGGA-CGC GCCGGTTGGCGTAGT 64 193 purB 3146903 .. 3146931 - -15.3 -4.76041 CACACCCATCAAAAA CAGGAAGCCCCGC AGG ACGGGGCTTCCTC ATGCTTCTACGTAAG 100 55 LT409_RS13750 NONE LT409_RS13745 3142665 .. 3142679 - -9.2 -3.53012 GTTGCTCTCTCGAAA CGCCGC TCT GCGGCA CCCGGCGCTCCCCTT 66 66 LT409_RS13740 3141746 .. 3141773 - -9.8 -3.30124 TCGCAGCGTCGAGAA GTTCCGGATGCC GTTA GGCAAACGGAAC GAAAGTTCTACCCGT 68 11 LT409_RS13735 NONE LT409_RS13730 3137168 .. 3137195 - -20.6 -3.31157 CAACCAGTATAGCAA GCGCGGCGCACC CGAA GATGCGCCGCGC GAGAAAACTTGATGC 100 50 LT409_RS13725 NONE LT409_RS13720 3136636 .. 3136648 - -2.7 -4.41348 CTCCTCCTAAAGAAA CCATT CCA AATGA CCGCAGCTTTGGCAT 63 4 LT409_RS13715 3135391 .. 3135419 - -8 -3.61517 AGCGGCGGCGAAGAA GCACGCGAGCGG CAAGC CCGATCGCGCCC GAACGAAGCCGCCAA 63 476 LT409_RS13705 3133888 .. 3133906 - -6.6 -5.4505 GTCCCGAAGAAAAAA GCGCGCTC TTA GAACGCGG GCTCCTCCGCCTGCA 95 15 LT409_RS13690 3128885 .. 3128895 - -4.6 -3.59979 GGCGGCCACTTGAAA GCAG CCG CCGC GCGCTATGGGCCGAC 54 101 LT409_RS13685 3127804 .. 3127832 - -14.5 -3.45571 TGGTCGAAAGACGAA CCCCGGTCGTCCC AGA GGGACGAACCGGG CGCACAATAACATCC 90 137 LT409_RS13660 3123781 .. 3123803 - -9.1 -5.05228 ACTAAAGCAGAAAAA GCGGCAGGA TTTCC CCCTGCCAC TAATCATCTGTTTAT 100 37 tet(O) 3121480 .. 3121490 - -4 -3.41602 CGCATTTCATCATAA TTAG TCT CTAA TCCTTTCAAATCTCA 47 64 LT409_RS13650 3121257 .. 3121297 - -10.6 -5.37171 AATACGAAACAAAAA GAGCCGATG-ATTCGTGAA TTGT TCCACAATTTCATCGGCTC TGCGTCTTAAGCGTC 100 32 lysA NONE LT409_RS13625 3116098 .. 3116128 - -20.5 -4.13767 GGGGGTAGTGTAAAA CGAACGGCCCCGC ACGAG GCGAGGCCGTTCG AGGGGCGTCGATGTG 100 50 LT409_RS13620 3113870 .. 3113893 - -5.8 -4.34402 GCGCCCACAGGAAAA GGCGCTCCGC ATTC GCGGCGCATC GCGTCCTTACGCCAT 71 32 LT409_RS13615 3113239 .. 3113255 - -2.1 -3.53091 AGCTCGCGCTTGAAA GCTGCGA TAT CCACGGC GGACCTTTACGACTT 47 32 LT409_RS13610 3112787 .. 3112798 - -2.2 -3.55622 TCCAAGCCCTCCAAA CG-GG GCA CCACG TATCCGAACATCCTC 47 39 LT409_RS13605 NONE LT409_RS13600 NONE dnaK 3108903 .. 3108927 - -5.5 -4.03078 CCATGATACTAGAAA GCGCCGACCGC CGG GACGTGGGCGC AAAATGCAACCCATG 65 234 pyrE 3108068 .. 3108103 - -24.2 -3.53012 CCTCCCCTCCTGAAA GGCCCGATCGACGCGCA TGA TG-GCGTCGATCGGGCC TTCGCATTCGCTTGG 100 79 LT409_RS13580 3104598 .. 3104608 - -8.2 -3.55622 CCGAACGCCGCTAAA CCGG CGC CCGG CGAATCGTCTTCTTG 62 129 LT409_RS13575 3103856 .. 3103886 - -15.4 -4.64676 CTAGCGGGAACAAAA CGGGGGGCGCTTCA AGT CGAAGCACCCCTCG CCTCTTTTAGTTCCA 100 32 LT409_RS13550 NONE LT409_RS13545 3099875 .. 3099900 - -16.1 -4.4267 GTGGAAAAGCGAAAA GCCCGCGCGCT GGGA AGCGAGCGGGC TCGAATATCCGCGGC 100 63 LT409_RS13540 3098197 .. 3098216 - -2.8 -2.57132 CCCTCCTTTGACAAT GGAATCGGC CGT GCCC-TTCC GAAATCCTCCTTCCC 38 53 LT409_RS13535 NONE LT409_RS13530 NONE LT409_RS13525 3095358 .. 3095407 - -10 -3.07113 GAGTATCGGACGGAA CGGCGCTGAGGAGGAGCCGGGGCGC TCT GCACC-CGGCCCCTCCCC--CACCT TAGGCGGCCGTGAAC 64 25 LT409_RS13515 NONE feoB 3091854 .. 3091902 - -12.4 -2.80816 CCCGCACCCACCACA CCACCCC-CAGCGCCTACCGC GCCGCCAT GCGCTAGGCGCTCCGGGGAGG CGCGGGAGGACGTTA 69 38 LT409_RS13500 3089316 .. 3089368 - -29.8 -2.78384 TGGCCGGCTAGCAGA CACGCGAACGGCCCGGGACGCGCG CCTGC CGCGCGACCCGGGCCGCCTGCGCG TTACGCCCGCGCGGC 100 26 LT409_RS13480 NONE LT409_RS13475 NONE LT409_RS13470 NONE LT409_RS13465 3082922 .. 3082938 - -9.4 -4.36914 TTTGGTTCGAGAAAA GGCGGA TCCCG TCCGCC TCGTCTTCCGTTTCC 82 51 LT409_RS13460 NONE LT409_RS13455 NONE LT409_RS13450 3079924 .. 3079943 - -3.4 -3.58533 TCAGAATGCCCGAAA CGCGCGCC CGCC GGCACAGG ATCGAGGGACTCCCG 51 63 LT409_RS13445 NONE LT409_RS13440 3076186 .. 3076196 - -8.2 -4.0162 CCGGTATAGCAGAAA CGGG CCG CCCG TTCCGCTCCAAACAG 71 95 LT409_RS13435 3075584 .. 3075606 - -16.2 -3.21218 AGCGCCCATCACGAA GCGGCCGCGC GCG GCGCGGCAGC GGATGGGACGGATGT 85 162 LT409_RS13430 3074717 .. 3074732 - -6.2 -3.49618 TGCGCATAGAACGAA TGTTTC ACGT GAAACA TCGGGAAAGGGGCCG 55 121 LT409_RS13425 NONE LT409_RS13420 NONE LT409_RS13415 NONE LT409_RS13410 NONE LT409_RS13405 NONE LT409_RS13400 3069638 .. 3069648 - -4 -2.7185 AGTATTTCGCAATGA GTAT ATC ATAC AAATAGCAAGTTACA 41 70 LT409_RS13395 3068190 .. 3068205 - -3.2 -4.28994 CAGGAGCCACCAAAA CCACCT TCTC AGTTGG GAATGCGAACGCTCC 65 130 LT409_RS13390 NONE LT409_RS13385 3064198 .. 3064231 - -7.4 -3.74693 GTCGAGCGCACGAAA GCGCGCCGGGACACGT CGGG ACGCG-C-CGTCGCGC CCGAGGACCGCGAGC 65 381 LT409_RS13375 NONE LT409_RS13370 NONE LT409_RS13365 3060493 .. 3060525 - -4.5 -3.90574 AAGAAGCACAGGAAA GCGGGGGGGGGGGGC AAA GCGCCGCGCTCCCTC GGCAACCCTCGTATC 59 39 LT409_RS13330 NONE LT409_RS13325 NONE LT409_RS13320 3045972 .. 3046007 - -7.5 -3.14132 GTGCCGCCTGACGAA CCGCGAGGCCGAGGTGC TCGT GCTGCT-GGCC-CGCGG GCGCACCGTGCGCTA 55 192 LT409_RS13310 3042765 .. 3042795 - -12.6 -4.56597 GGCGGGCGCGAAAAA GCCCTGCGCC GGGAGGGAGGT GGCGCAGGGC TCGGGGAGGGTTGCA 100 70 rplM NONE rpsI 3040480 .. 3040506 - -20.2 -4.65895 CTCCTTATGCAAAAA GAGCCCGCCTCC AAA GGAAGCGGGCTC TGCAGAAAACGTGCT 100 57 LT409_RS13280 3039819 .. 3039838 - -11.4 -4.8048 CTCGCATACGAAAAA CCCGCCTC CGAG GAGACGGG CTCAGAAGAACCGCG 100 56 LT409_RS13275 3038871 .. 3038886 - -3.2 -3.62224 ATACTGGCGCAATAA TGCACT TATA AGTGCG CTTCTTACCTGAAAG 51 141 LT409_RS13270 3038017 .. 3038067 - -14.7 -3.28712 CCCCTCCCCGGACAA CGTGCGCGCCGGGGATTCCGGG TTGCAGCT CTCGAAACCCCCGGCGCGG-CG GCCTACGCCATCGCG 86 28 LT409_RS13265 3036447 .. 3036460 - -3.1 -2.87344 CACGTTCGCCATATA GCTTA TGCC CAAGC AAAAGGTGATCACGC 42 148 LT409_RS13260 3034949 .. 3034965 - -9.3 -3.13403 TCGCCTGCATGAACA TCGCCGC ATC GCGGCGG CTGCCGCGCCGGGGC 61 190 LT409_RS13255 NONE LT409_RS13250 NONE LT409_RS13245 3029771 .. 3029784 - -4.5 -3.5764 AATTGCATTCCGAAA CGAAC AGCG GTCCG TCTCGTGCGAAACCC 54 154 LT409_RS13240 3028432 .. 3028447 - -9 -3.61398 GGGCGCCTTCAACAA CGCACT TGAA AGTGCG CAACTCACTTATTGG 68 71 LT409_RS13235 3027625 .. 3027657 - -15.7 -4.56597 CTCCCCTTCCAAAAA GGACTGCATCACG CCGAGTT CGCGATGCAGTCC GAACTTCGTCTAGTT 100 35 LT409_RS13230 NONE LT409_RS13225 NONE LT409_RS13220 NONE LT409_RS13215 3024250 .. 3024283 - -16.7 -4.56597 GCTTCGCTTCAAAAA CTGACAGCCCGCCTC CGAG GAAGCGGGCCGTCGG TCCGTCTCGCAGAAT 100 45 LT409_RS13205 3020422 .. 3020432 - -3.2 -2.58544 CCGCACGGTCATAAC CGAC TCC ATCG CGCCTCCCTTCGACG 40 94 LT409_RS13200 3020008 .. 3020029 - -5.9 -3.17229 ACCGCATGATCAATA CGCCG-TAAT CAA ACTAACGGCG AAATGTTTCAAGAAG 50 67 LT409_RS13195 3017751 .. 3017803 - -15.6 -4.37092 ATTGCTGGCAGAAAA GGCG-AACA-TGCAAGCGGCCCCGGC ATA GCCGGGGCCGCTGGAAGCGTTTCGCT TACACGTAGAACAGG 100 25 LT409_RS13190 3016243 .. 3016265 - -12 -3.24747 GCCGTACAGCACCAA CGTCCTGCTG TCG CAGCAGGAAG GCGATACCGGAGCCG 71 300 LT409_RS13170 NONE LT409_RS13165 3011102 .. 3011126 - -3.6 -3.95022 GCTACCAACACGAAA GAAAGCGCAAC CGCG GCCGC-CTTTC GACCAGGCGCGTGGG 56 179 LT409_RS13150 3005757 .. 3005803 - -16.6 -4.56597 TCCTTCGCTCAAAAA GCGAAGCCCTCCGGCCGGCCGC AAGCA GCGGACGGT-GG-GGGCTTCGC GACATACCAAACTAT 100 44 cimA NONE LT409_RS13140 3003553 .. 3003587 - -15 -4.14541 GAGCAACTAGAGAAA CCCCAGGTGACAGAAA ATC CTTCCGCCGCCTGGGG CTCTTTTCTGCTCGC 100 284 LT409_RS13130 NONE LT409_RS13125 3000395 .. 3000417 - -9.1 -3.01745 TTCGCAACAACTATA GCACGACCG GGTAA CGGTCACGC GATCTCCACGCGCTG 60 99 LT409_RS13120 NONE LT409_RS13115 2998582 .. 2998611 - -9.9 -4.13767 CTCGGGATGCGAAAA TCGGGACCGACGA GAAA CCGTCGGTCCCCC TGCATAGGTTTTGCC 80 49 LT409_RS13110 2997269 .. 2997281 - -6.2 -2.50492 CACTACGATCAACAG GCGC TTCAT GCGC TTCTCCCCTCGTTTT 45 18 LT409_RS13105 2996703 .. 2996745 - -11.9 -4.05788 TTGGCGTAAACGAAA GTCCGACAGCTGTGGCGGCC CGAC GGCCGCCGCAGCC-TCGGTT AGCGGTTGGTCACTT 84 24 LT409_RS13095 2992865 .. 2992875 - -8.2 -3.80573 CGTACGAGTACGAAA GCGC GTC GCGC AAGAGCCTCGAAGCC 67 514 LT409_RS13085 2991190 .. 2991204 - -5.6 -3.75153 TTTCCGGAAGCGAAA GGCGCA AAA CGCACC TGACACCTTCCTTGA 60 229 LT409_RS13080 2989378 .. 2989414 - -16.7 -2.78384 TTTGTCCCGACCATA GTGGTGGCCAAGCGA AACAACA TCGCTTGGCCACCAT CCCAAGAATCTATTT 84 35 LT409_RS13075 2988301 .. 2988311 - -3.2 -4.80853 ACCCCAAAAAAACAA GACC TCC GATC ATAAGCCTTTCAGGA 74 24 LT409_RS13055 NONE LT409_RS13050 2981923 .. 2981949 - -16.6 -4.58395 CGGACGCCCGAAAAA GAGGGCGCGC CCGGATT GCGCGCCCTC CGATAAGCCCTCTTA 100 38 LT409_RS13045 2981215 .. 2981230 - -6 -3.53224 CATTGTCGCCCGAAA GCCGCG GAAT CGCGCC TGAAAACGAGGCTTT 55 78 LT409_RS13035 NONE LT409_RS13030 2976759 .. 2976788 - -18.6 -3.34398 TTCCCCTCCGAAACA GCTGGACGGCCG ACGAAG CGGCCGCCCAGC CTGATGCCGTTAGAT 95 35 LT409_RS13025 2976002 .. 2976016 - -4.2 -2.79796 GCTCAGTTCATGATA GGGC TTCGACC GCCC GATGCCTAGCTACTT 43 35 nrfD NONE LT409_RS13015 NONE LT409_RS13010 2973287 .. 2973299 - -5.5 -3.25823 CGTGGCGCACACGAA CTGCG GCG CACAG CACATGAGCGGCAAG 51 356 LT409_RS12990 2966765 .. 2966797 - -29.2 -3.05384 GGTGCGCGGACGGAA CGGGGGCGGGGCGC TCGAT GCGCCCCGCCCCCG TTCGCGATTCTGATG 100 63 LT409_RS12970 2961818 .. 2961828 - -3.2 -3.9534 ATGGATACCTACAAA TGCC TCG AGCA CCGCGGCGACATGGT 58 491 LT409_RS12960 2958220 .. 2958230 - -6.8 -3.47349 GCTCGAAACGTACAA CGCA TAC TGCG ACGAAGGAAACGACC 57 409 LT409_RS12945 2954327 .. 2954338 - -5.8 -3.14132 GCCTGCCCCGAGCAA GTGG ATCC CCAC AGCAAGCGTATCCCC 49 136 LT409_RS12910 2946880 .. 2946890 - -2.4 -3.41602 GCTATCCTAGCACAA CGTC TCC GCCG CATCATCCATCATGT 44 6 LT409_RS12905 2944910 .. 2944922 - -9.1 -3.53091 ATGCGCGCGGGGAAA GAGCG GGA CGCTC GCGGGATGCGGGGGA 66 359 LT409_RS12900 2943174 .. 2943197 - -16.7 -5.81412 GGCACGCAAAAAAAA CGCCGCCCG TTCGTC CGGGCGGCG TTTCCAGTGCGTGTT 100 55 LT409_RS12890 NONE LT409_RS12885 2939466 .. 2939477 - -7.2 -4.07568 GCGCTTGTCCTAAAA GGGG CTGT CCCC TTTTAGGACAAGCGC 68 267 LT409_RS12875 NONE LT409_RS12870 2936125 .. 2936183 - -6.3 -2.73771 CGATAGCGTCGAAAC CGCTGTTCTGCGCGCCG-G-CCCT-TGC TTGGGACC GCACAGGGACACGGCGCGCAAAAC-G-G CTTCGGCATGCGCTT 46 41 LT409_RS12865 2934489 .. 2934523 - -10.7 -4.25104 GCTGTCGCACGAAAA GACGGCAACGGCCGAG ATGC CCCGGCCAATGC-GTC CCAGCGAGGCGCGTG 86 293 LT409_RS12855 NONE porA NONE LT409_RS12845 2929355 .. 2929385 - -18.4 -5.1764 GATAGAATATAAAAA TGAAGGGCGCCGCT GCA AACGACGCCCTTCA TCTTGCTCGTGCCGA 100 53 LT409_RS12840 NONE LT409_RS12835 2927678 .. 2927688 - -2.4 -3.35775 ACCAGCTCGCAAACA TGCC GAT GGCG AGCCTGTTTACCAGG 45 276 LT409_RS12825 2923706 .. 2923721 - -2.6 -3.04609 CCATCGAAATGAAAT CCAT-AC TGA GTCATGG TCTACCCCCTAGGCC 41 34 dmsB NONE LT409_RS12815 NONE dmsD NONE LT409_RS12805 2920364 .. 2920377 - -2.3 -3.4072 CATGCCGTACCACAA CGCCG TCCC CAGCA CTTCGGCGATCATGA 44 464 LT409_RS12800 NONE LT409_RS12795 NONE LT409_RS12790 2918049 .. 2918067 - -4.5 -2.62933 TAATCGCGCACATCA GCAGCAG CACGC CTACCGC GATGATCATCCGCAC 43 43 LT409_RS12785 NONE yaaA 2916184 .. 2916213 - -7.9 -2.73124 TCCGATGCGCGAAAT GGCGGCTTTCA CATCCACC CGAAAACCGCC GGGATTCGAAAGCTC 53 198 leuS 2913447 .. 2913476 - -12.1 -4.07885 TAGCCCCCTCCAAAA CGGAACGGCTCGG AAAC CCCAGCCGTTCCT CAATGTCCCAGCCTT 89 51 LT409_RS12765 2909929 .. 2909957 - -8.7 -3.53012 CGCGCCTCCTTCAAA CCGCATCGCAGCG TTA CTCGGCGATGCCG AGCAATTCGTACAGC 66 10 LT409_RS12760 2908789 .. 2908840 - -25.4 -3.56959 AGACAAGGGAGACAA GGGAACGAGGTTTACGACTCGTCG CGGG CTATGAGTCGTAAACCCCGTTCCC TTGTCTCATTCCAAG 100 31 LT409_RS12755 2907815 .. 2907838 - -6 -3.61398 CGCCTGCGCGAAGAA GGCGCAGCG GTCATCG CGCT-CGCC TGCACGGGGTTTTCG 57 177 LT409_RS12740 NONE LT409_RS12735 NONE LT409_RS12730 NONE nrfD 2901127 .. 2901158 - -18.8 -3.90048 CCGCGCGCAAAAAGA GACAGGCGCCGC GGAGGGGT GCGGCGCCTGTC AGGCAATGCTATGTC 100 67 LT409_RS12715 NONE LT409_RS12710 NONE LT409_RS12705 NONE nrfD 2894747 .. 2894781 - -13.6 -3.09273 TCGTCGGAATACAGA CGGGCGCTGCGC GGAGGGGGAGT GCGCAGCGCCCA TGAAAGAGGAAAAGC 76 114 LT409_RS12695 NONE nrfD NONE LT409_RS12685 2889279 .. 2889304 - -6.8 -4.02534 AGCGAAATTCACAAA CCAGCTCGCGC CCAGC GCGCG-GCTGC CGCGCCCTCCCTCAT 68 190 LT409_RS12680 NONE LT409_RS12675 NONE dapB 2885896 .. 2885936 - -3.8 -3.65351 TGACCCGCATCCAAA GAGGCTGGGCGGTGGCC-GC CGT GCTGGCCGGCGCCCTGT-TC GCCTGCACGATCGCC 53 158 LT409_RS12660 2884670 .. 2884699 - -20.7 -6.23317 ACAAAAACAAAAAAA GCCGCCGACGGCC TTTC GGGCGTCGGCGGC TTGAAGGTCTTCGAG 100 52 LT409_RS12645 NONE LT409_RS12640 2874421 .. 2874451 - -18.4 -4.62069 CCCCTATCCCAAAAA GCGGGGTACGCT GTATTTT AGCGTACCCCGC CAAGACGTGCTCCTC 100 110 dmsB NONE dmsD 2873050 .. 2873061 - -2.2 -3.01269 AATCCTGAAATCATA CAGG CTAT CCTA GCGGTAGAACCTCGG 41 23 LT409_RS12625 2871663 .. 2871688 - -7.5 -3.41051 CGATCTGGAGGACAA GGCCGAGCA-CG ACG CGCTGACCGGCC TGCTGAACCGCCAAA 58 507 LT409_RS12600 NONE LT409_RS12595 2860829 .. 2860868 - -5 -3.62046 TCAGTTCCTCAAGAA GATTGTTC-GCCGCGTC TTCGACG GACGCAGCAGTACAAGC ACACATATTCGGTCT 54 141 LT409_RS12590 2858918 .. 2858930 - -9.1 -2.60075 GCGCCCCGAAGGAAG TCCCC GCA GGGGA TACTTCGGTACGCGA 56 107 LT409_RS12585 NONE LT409_RS12580 NONE LT409_RS12575 NONE LT409_RS12570 NONE LT409_RS12565 NONE LT409_RS12560 2853203 .. 2853244 - -12.2 -4.13767 GGCGTTATGGGAAAA CGCCGCACATGCCGAGGGC AGCAG GCCCTCGCCGCGC-CGGCG GAAACGCATCATATG 89 218 LT409_RS12550 2850578 .. 2850593 - -6 -4.15044 CCCTCCCTCAAGAAA GGCCCC GATA GGGGTC TTTCTCAGCTTGAGA 68 88 LT409_RS12540 2847044 .. 2847065 - -4.4 -3.55622 CTCAAGCGCTCGAAA CGCGCTTC TCGCTG GAAGCACA CGCAAAAGGCCTGGT 52 240 LT409_RS12535 2844846 .. 2844868 - -9.1 -3.07113 TACTAGCCGATGGAA CGCGTTCGC ACAAG GCGAACCCG TCCGAAGCGCAAAGC 60 88 LT409_RS12530 2843300 .. 2843324 - -7.8 -4.12188 TGACGATCTCGAAAA GCACGCCTCA GCGAA CGAGGCGTGT TTTTCGAGCGAGGAT 71 54 LT409_RS12500 2835912 .. 2835922 - -3.2 -4.07618 TGTCGAAGAAGGAAA CAGA AGT CCTG TTCCTGCTGGCGAAA 60 492 LT409_RS12485 NONE LT409_RS12480 2830250 .. 2830265 - -2.4 -3.01712 CCTGCGTCCCGAACA GCCCCG CCGA CCAGGC AACCAGGGTGGTAAA 41 71 LT409_RS12475 2829150 .. 2829160 - -4.6 -3.64703 GCCTGGGGACGGAAA GGCC GCC AGCC CTCTTCGAGAGCGAT 54 267 LT409_RS12470 2827219 .. 2827252 - -3.8 -5.37593 CCTCAAATGAAAAAA CGCCCG-A-GGGAGGC AACT GCGTACCGTTCGGGCG CTTAGCACTTTGTAC 85 199 LT409_RS12460 NONE LT409_RS12455 NONE LT409_RS12450 2820640 .. 2820654 - -7.8 -3.6003 GAAAGCATTGGCAAA GCCCTC CTC GAGAGC GATCCGTCGTTTGCA 64 153 LT409_RS12445 NONE LT409_RS12440 2818844 .. 2818865 - -5.1 -3.85864 CGACGAGCAGAAGAA GGCATGAGCA TGC TGCACA-GCC ATTACCCTTGCAACC 59 27 LT409_RS12430 NONE LT409_RS12425 NONE LT409_RS12420 2812099 .. 2812115 - -4.3 -5.47218 TTCGAGCCAAAAAAA CGTCCCA AAC TAGGGCG TGCCGTGACAAGCTA 93 479 LT409_RS12410 NONE LT409_RS12405 NONE LT409_RS12400 2806572 .. 2806599 - -11.2 -3.86015 CATTCGTTCGAGAAA CCCTCCCCCG TGCGGCGG CGGGGGGGGG GATGCGCCCCGACCC 82 104 LT409_RS12390 NONE LT409_RS12385 NONE LT409_RS12380 2799918 .. 2799975 - -4 -4.67904 CACGAAGTCGAAAAA GTCGCAGAAGAGGCGCCGGAACC-CGCT CGGG AGCCCGGCCCCGGC-CCTCCTCGAGGGC GATCCGTCGTTTGCA 70 254 LT409_RS12370 2796038 .. 2796068 - -10.4 -4.60487 CAGGACGCTGAAAAA GCCGCCGCCC AGGGAGGGAGG GGGCGACGGC TTCGGGGATGCAGGC 89 74 LT409_RS12365 2794592 .. 2794603 - -3.6 -3.86194 AACCGCCCCTACAAA GAGC TCAA GCCC GGCGCCGACGTGCGC 56 286 LT409_RS12355 2793166 .. 2793189 - -19.6 -3.16492 TGAGACGTACGAATA GGCGAGGGCG ACGC CGCCCTCGCC CGGCGGGAACCCGCT 91 39 LT409_RS12345 2789526 .. 2789543 - -2.6 -2.55544 CGATCAGCGAAGGGA GGATGC TACTTG GCGTCC CAAGGCTCGAGACCC 38 13 LT409_RS12340 2788622 .. 2788647 - -13.3 -3.66654 GATCCCAACGCGAAA GACCCGGCC GAGGGAGG GGCCGGGTC TTCGATGACCCCGAA 88 96 LT409_RS12335 2787642 .. 2787670 - -23.3 -3.272 ACCACGGGATACGAA GAGACCCGTCGGA TGA TCCGACGGGTCTC TTTTTCATTGCTGAC 100 128 cpaB NONE LT409_RS12320 NONE LT409_RS12315 NONE LT409_RS12310 NONE LT409_RS12305 NONE LT409_RS12300 2781820 .. 2781838 - -4.5 -3.61715 GACTGCTGCCAAGAA CGCGGCCG TAAC CAG-CGCG AACTCGACCGTTCCC 54 93 LT409_RS12295 NONE LT409_RS12290 NONE LT409_RS12285 NONE LT409_RS12280 NONE LT409_RS12275 NONE LT409_RS12270 NONE LT409_RS12265 NONE LT409_RS12260 NONE LT409_RS12255 2776145 .. 2776203 - -8.7 -3.04792 CGACCACTGCGAACA GGAACAGGAGCAGCAGGGGCAGCGCGAT GACG AACGCCACGACGCTGCCGC-CCCGTTCC GAGCGTCCTTTACGC 60 35 LT409_RS12250 NONE LT409_RS12245 NONE LT409_RS12240 NONE cpaB NONE tadA NONE LT409_RS12225 NONE LT409_RS12220 NONE LT409_RS12215 NONE LT409_RS12210 NONE LT409_RS12205 2767759 .. 2767771 - -3.4 -2.82681 GAAAATCGCAGGATA CATG TAACG CATG GTTCGTCCTCTCTCG 41 55 LT409_RS12200 2766887 .. 2766897 - -4.6 -3.15758 AGAATTCGCCAGCAA CGCC TTG GGCA ACATCCTGGGCATGG 47 434 LT409_RS12180 NONE LT409_RS12175 2761485 .. 2761495 - -3.2 -4.11412 CAAGCAACAAGCAAA GGAC GGA ATCC CATGAGCGACCTTGC 59 405 LT409_RS12160 2758756 .. 2758774 - -2.3 -3.14132 GGGCTCCTCCATGAA CCGCACG GTCTA CACGCGA CCATCCCGTCCCCAT 43 42 LT409_RS12155 NONE LT409_RS12150 2755863 .. 2755881 - -8 -2.78715 AAGCCGTTGACGAGA CGTCGCAC GGA GCGCGGCG GCAAGCGCCGAACGA 53 110 LT409_RS12145 2755415 .. 2755438 - -12.6 -3.44051 TCTGCACTATCAGAA CGAATGTTTC ACGT GAAACATTCG CGGGCGCCCGATGCC 79 40 LT409_RS12140 2754887 .. 2754902 - -2.4 -5.03314 CTTAGTCCCAAAAAA GAAGCG CTCT CGCGCC AAAACTGCCGCCGGT 78 184 LT409_RS12135 2752385 .. 2752406 - -9.4 -3.60792 TGCGGAAGGCTCAAA GCTCGAGG CGGTTT CCCCGAGC CCTTGAGCCGTATCG 68 42 LT409_RS12130 2751987 .. 2752020 - -20.5 -2.70932 CTCGCCTGCGAACGA CGAAACGGATGCCTC GCGT GAAGCATCCGTTTCG TGAATGTCCTATAGC 95 59 LT409_RS12125 2751164 .. 2751199 - -14.7 -3.04537 AGCATAGCATACAGA CACCCGCCCTGCCACT GAGAG AGAGGC-GGGCGGGCG CATCGTCAAGAACTT 80 97 LT409_RS12120 NONE LT409_RS12115 2749036 .. 2749046 - -2.4 -2.74144 TGGCCAGCCCGAAAC GGGC AGA GCCT ATGGTAGCAAACTTT 39 49 LT409_RS12110 2748738 .. 2748755 - -5.6 -3.97388 ACATGGTATCACAAA GGAAAG CGGGCT CTTTCC CTGCACTGCGCCAGC 62 198 LT409_RS12105 2747506 .. 2747537 - -18 -3.65224 ATGGTACCGCAAGAA CGAAGCGCCGCCCC AGAA GGGACGGCGCTTCC ACCAAAGCAACAGAG 100 123 LT409_RS12100 2746396 .. 2746411 - -4.6 -3.44848 GGTTTCGATCAAAGA GCGCGA GCGT TCGAGC TTCCGATCGAGGAGA 52 201 LT409_RS12095 2745716 .. 2745739 - -16.8 -4.21194 CTTTAGCACGCAAAA GGAAGAGCCC CGCT GGGCTCTTCC AATGTGAAGCGATTT 100 59 leuC NONE LT409_RS12085 NONE leuB 2742678 .. 2742700 - -14.9 -5.24531 ACCGCTGACAAAAAA GAAGCGCCC GTTCA GGGCGCTTC TTTTTTACTTTGCAA 100 49 LT409_RS12070 2737637 .. 2737662 - -6.7 -3.20858 TACCATAGGGAGCAA GGAGGAGCCGT GCGA ACGGCGCGCCC GCCATCGAGATGAGC 54 168 tyrS 2736320 .. 2736343 - -16 -3.9941 TTTTCCAGAAGCAAA GCAGGCGGCC CGAA AGCCGCCTGC CGATTATTACACGAT 95 54 LT409_RS12060 NONE LT409_RS12055 NONE LT409_RS12050 2734321 .. 2734345 - -10 -4.17316 ACGCCGGTAAAACAA CGTGGCACCC TCCAC GAGTGCCACA CATACCGGTTGATTA 84 38 LT409_RS12045 2732260 .. 2732272 - -2.6 -3.02829 GACAGCGGGCGAAGA GGCC AGGCG GACC CTCGCGACGGGACCC 41 114 LT409_RS12040 NONE rrf 2728840 .. 2728856 - -7.9 -3.57144 CTTCGCATGCCGAAA CGCCCTC CGC GAGCGCG ACGCCCTATCCTCCC 64 18 LT409_RS12030 NONE LT409_RS12025 2727619 .. 2727652 - -24.1 -3.95071 CAAACGCGCAAAGAA GAACACCCTCGAAGC CCAA GCTTCGAGGGTGTTC GAACGACCTCGTCAA 100 49 LT409_RS12020 2724854 .. 2724864 - -2.4 -2.62613 TTGTAGCGCAAACAC CCGC GAA GCCG CCATCACTCGCCCAA 38 29 hisS 2723368 .. 2723385 - -14.1 -3.17075 CCTCTCCCAAGCGAA GGCGGCC TCTC GGCCGCC TTCGTCGTCTTGCTC 78 68 LT409_RS12005 2719817 .. 2719844 - -14.8 -3.01712 CGCCCCTCGCGAACA CGCCGCCCGCCCC GGC GGCGCGGGCG-CG CCTCATATCAATCCC 80 28 LT409_RS12000 NONE LT409_RS11995 2718826 .. 2718836 - -2.4 -3.53012 GCGCGCGGGTCGAAA CAGG TAT CCGG TTTCATGCAAAATGC 47 55 aspS 2716880 .. 2716909 - -17.9 -3.49475 CGCATTCGGATAGAA CAGGGGCCCGTTG AGAT CAACGGGCCCCTC GATGCGTTCTTTCGC 100 49 ffs 2714977 .. 2714992 - -2.4 -3.05536 AAAGTATCTCGAATA GGCAGG GGCG CTCGCC AGCGGTCCCTTATGG 41 1 LT409_RS11975 NONE dnaX 2711833 .. 2711848 - -10.4 -3.61398 GGTCGTTTCGAACAA GCCGCA TACG TGCGGC GAACTAGCTGTCGCG 73 41 LT409_RS11965 2711434 .. 2711449 - -2.6 -2.64243 GCACAGCGTACATGA TCGCGAT TCT ATC-CGA ACCAGGTTACATAAG 38 32 recR 2710796 .. 2710807 - -5.8 -3.92324 CGCGGCAAGATTAAA CTCG CAAG CGAG AGGAGTAAACTCCCC 62 53 LT409_RS11955 2709123 .. 2709148 - -11.1 -4.0492 CAACCCTTAGACAAA GCAATGGCCGC AGAG GCGGCCATCGA GGGGAGGCGAGATCG 84 49 LT409_RS11950 2706226 .. 2706237 - -5.8 -3.07043 GCCATTATTTGAACA CCAC CTCA GTGG ATTCGCTGAATTCAG 49 3 LT409_RS11945 NONE LT409_RS11940 NONE LT409_RS11935 2704047 .. 2704101 - -17 -2.72344 CGCCAGCCCCAAGCA CACGAGAGCCGCGACGCCGAGCGCGC TCA GCACGCGCAACGTCGACGCCCTCACG CGCCGCTTCCCTTCC 84 45 LT409_RS11930 NONE LT409_RS11925 NONE LT409_RS11920 2701390 .. 2701411 - -7.9 -3.21416 GATGCGCACGACGAA CAGCGCGCC GCCG AGCACGCCG AGGACGAGGCGACGC 57 503 LT409_RS11910 2698053 .. 2698093 - -19 -3.64822 ACCCCCGCACGCAAA CACGC-CGGAAGCCGCGCC AAAA GGCGCGGCTTCCGAGGGAG GGAGGGTATGGCAGG 100 49 LT409_RS11900 NONE LT409_RS11895 NONE LT409_RS11890 2691604 .. 2691639 - -19 -3.5891 TTGCATAACGAAACA CGCCGGAAGCCGCGCC AAAA GGCGCGGCTTCCAAGG GAGGGAGGGAAACGC 100 48 mobB NONE LT409_RS11880 2688854 .. 2688901 - -10.6 -2.72344 GGCGAGGGCGAATCA TCGGCCCGAAAACAC-GCTTCCG AGC CGAATTCCGTGTCTTTGGGCCGA TGATGAGCCCTTCCG 61 45 LT409_RS11875 NONE LT409_RS11870 2686724 .. 2686752 - -10.3 -3.28712 GCGTTCCCCTCATAA GCTGCGCGC CCTCCCCTCCC GCGCGCAGC ATCCTACCCGCGCCC 68 191 LT409_RS11860 2683033 .. 2683080 - -6.4 -3.05384 CGGGCGGTTAGCTAA CCTCTTGATT-CTTACGGGGTCA CCA TGACCCCGTAAACAACGTACAGG CTTCTTCGCGACGGC 52 89 LT409_RS11855 NONE LT409_RS11850 NONE LT409_RS11845 NONE wecB 2678492 .. 2678519 - -3.2 -3.64703 CGGTGTCGAGGTAAA GCCGCGCTTTCG CTAG CGAGGGCACGTC GGCTCCCTCCCGCTC 51 10 LT409_RS11835 NONE LT409_RS11830 NONE LT409_RS11825 NONE LT409_RS11820 NONE LT409_RS11815 NONE LT409_RS11810 NONE LT409_RS11805 2668891 .. 2668904 - -2.4 -4.42653 AGCGCACTCATAAAA CAGT TCCTCG ACTG CGATCAGTAACAATA 63 4 LT409_RS11800 NONE LT409_RS11795 NONE wecB NONE LT409_RS11785 2664048 .. 2664064 - -2.2 -2.63073 CTTTGTGAAGAACAC GCTCCG CATCT CAGAAC TCCCCTTCCATGTCC 38 19 LT409_RS11780 NONE LT409_RS11775 NONE LT409_RS11770 NONE LT409_RS11765 2659846 .. 2659856 - -4.6 -3.75024 CCTCACTACGAAGAA CCCG TAT CGAG AGGACCAGACAATCA 57 75 LT409_RS11755 NONE LT409_RS11750 NONE LT409_RS11745 2654326 .. 2654352 - -20.9 -4.18506 CGACTGGGAAAAGAA GCGCGGCCGTC GCGTT GACGGCCGCGC TCGGCAAGGCGCGAT 100 57 LT409_RS11740 NONE LT409_RS11735 2652861 .. 2652884 - -19.6 -3.63627 CTCGCACACGCGAAA GGGGCTCCGC GACG GCGGAGCCCC TTCAGGCAAACGGAT 100 55 LT409_RS11730 NONE LT409_RS11725 2649869 .. 2649880 - -2.2 -3.38046 CTCCCATTTCAAACA CTCG CTTT CAAG ATCGAAGTGACGACG 44 44 LT409_RS11720 NONE nrfD 2648141 .. 2648173 - -22.7 -4.11216 GGGCGACCTCGAAAA CACGGGCCGGCAGCC AAG GGCTGCCGGCCCGCT TGCGAAAGACGGCGA 100 59 LT409_RS11710 NONE LT409_RS11705 2646928 .. 2646955 - -9.8 -3.35679 CTGCTTCATGCAGAA CCGGTGCGA-GCG CGG CGCCCCGCAACGG CCCGCGCTCAGCGAG 68 33 LT409_RS11700 2645501 .. 2645559 - -9.5 -3.01712 TTCCCGTGCCGAAGA TTCGGGGGATCGCGGAGGCGAAGCGTAC TGCG GTACGCGA-GCTTCCGGGATCGCGCGAA GATTCGGTGCGCGAA 60 89 LT409_RS11695 NONE LT409_RS11690 2643849 .. 2643859 - -4.6 -2.8352 CCCGAATCGAAGAAG CCGA CGA CCGG ATACCGCGATCCCAG 43 84 LT409_RS11685 2643283 .. 2643325 - -4.9 -2.62463 CGCACGACGTAGAAC GTCATCTCGCCGGAA-CGGCG CTC CCCCGCTTCCATC-AGACGAC CTTGCACACGTCGAC 43 17 LT409_RS11680 2642590 .. 2642617 - -9.7 -3.28924 TAGTTCCTTTCAGAA GCGGTCGGGGC GGGCTT GCTCCGGCCGC TTCCGTTTCACGGCC 63 33 ptcA NONE LT409_RS11650 2635607 .. 2635619 - -4.7 -3.06302 ACGAGCCTGAGCTAA GGCAC CGA GGGCC TGGACGACAACGGGT 46 128 LT409_RS11645 2634259 .. 2634305 - -13.6 -2.73364 CGCGCAGTCGAAGGA TCCCGTTTGGCGGCAGCAGGAA GGT TTACGGCTGGCGCCGCACGGGA TCCTTCGACTCCGGC 73 115 aguA NONE arcC 2632013 .. 2632044 - -15.8 -3.37796 CTTCACGATGGAGAA GCGCGTGGCCCG-CG CGT CGACGGGCCGCACGC TTTCGGCGCTTACGC 89 35 LT409_RS11630 NONE ptcA 2627437 .. 2627458 - -2.1 -3.05384 GGCCGCGTCAGCTAA CGTCGCGGGC CCG GCCCG-GTGG AGCGTTCGATCAGTG 41 89 LT409_RS11610 NONE aguA 2624323 .. 2624355 - -13.4 -4.7373 GGAGGTGAGGAAAAA GCGGAGCGGCCCCT GGCGA AAGGACCGCTCCGT GGCCCGCCGCCCTCC 100 214 arcC 2623256 .. 2623287 - -20.1 -4.85782 TCGCGCAAAAAGAAA GGGCCCGCGGCCG GACATG CGGCAGCGGGCCC TTCGGGCAACGGATC 100 45 LT409_RS11585 2620654 .. 2620680 - -3.6 -3.59979 GCCTCTTAGCTCAAA CCCTCAGAACCT TCA AGGTTATGCGGC TCGCTGCAGCAAGCC 51 154 LT409_RS11580 NONE LT409_RS11575 NONE LT409_RS11570 2617915 .. 2617927 - -10.5 -3.17901 ACAGCTTCAAGCGAA CCGGC TGA GCCGG TGTCGCCGGGATGCC 65 52 LT409_RS11520 NONE LT409_RS11515 2609291 .. 2609334 - -2.9 -3.92746 TCTACTTCAAAAAGA CGGCCGGCAGCTACGACGCG GCGCT CGCG-CGCTACCGCGAGCAG AACCGCCGGTAGCTC 54 62 LT409_RS11500 2607614 .. 2607630 - -4.4 -3.13853 GTAAGGACGCAAAAC GAC-CGC CAGC GCGCGTC CCTTCGCATGACCTC 48 107 LT409_RS11495 2606626 .. 2606664 - -23.2 -3.14132 CCGCTCGCGCACGAA GGACCGCCCGCGATCCGT CGA ACGGATCGCGGGCGGTTT CGCGTCGGGCGGCTT 100 39 LT409_RS11465 2599860 .. 2599876 - -2.2 -3.87104 CGGAGACGAGAAGAA CGGC AACGAAACA GCCG CAAAAACCTCGAAGC 55 403 LT409_RS11455 NONE LT409_RS11450 2589873 .. 2589893 - -19.7 -4.45068 AGCCGCAACAAGAAA GGGGCGCGC CGA GCGCGCCCC TCAGGTCGAACTTAT 100 37 LT409_RS11445 2589059 .. 2589073 - -4.2 -4.1711 AGCAGGTTCAACAAA GTAAGC GGG GCTTTC GAAGCGGCGGAAAAC 65 52 glmM 2587532 .. 2587586 - -15.9 -3.69702 CACTACGCAATAGAA GGATCCCGAATACGGCACCGGCAGAAA GAC TTCCTGCTGACGCCGCA--CGGGATCC TTCGCGTCCCCGCTT 93 134 LT409_RS11420 2580927 .. 2580945 - -16 -4.7458 ACCATAATAAACAAA CGCCCCCA TGA TGGGGGCG CGATGTTCGCAAAAA 100 277 srtB NONE purF NONE purM NONE purN 2576425 .. 2576458 - -6.5 -2.52676 TACGCGCGGAACGGA CGGTTGACCTGCGGG TTTC CCCGCGGGTTCATCG GGCGGGGGCGATATG 48 20 LT409_RS11395 2575333 .. 2575364 - -2.8 -4.30576 CGCGCACGACGAAAA GGTCAGCGAGCCCCG CCG CAAGGCGCAC-GCCC TCAGCGGCCCAGGCT 63 26 purH 2573572 .. 2573597 - -19.1 -5.40072 GCGCCCGCAAAAAAA CGGCAGCTTCG TTTC CGAAGCTGCCG CTTGCAACATGGTAT 100 51 LT409_RS11385 2571633 .. 2571651 - -4.4 -4.08692 GAAGTTGGGCGAAAA CGGTTCCC AGG GGGCACGG ACGTTTTTCTGGACT 61 42 LT409_RS11380 NONE LT409_RS11375 NONE LT409_RS11370 NONE LT409_RS11365 2566587 .. 2566611 - -2.8 -3.727 TGGAGCACACCGAAA CGTCGTCAAT TTACC ATTGAGGCCG CGGAGGAAGGCTGAA 52 69 LT409_RS11360 2564958 .. 2565004 - -7.3 -3.36803 CAACGCGACGCAGAA CGGCAAAACGACGA-GAGC-TCG AAA CGTCACTCCTCGCCGTCTAGCCG TGCGCTTCTGTCCGG 56 56 LT409_RS11355 2561876 .. 2561893 - -10.5 -2.70932 CTCCTTCGTTAACGA GGCCGCA TCGT CGCGGCC TCCGTGCGGTTTTTC 61 102 LT409_RS11350 2561152 .. 2561172 - -9 -3.54475 CCGGCGACGAGATAA CCG-TGCGC ACGC GCGCATCGG GACCGAAACAGTGCG 62 285 LT409_RS11335 NONE LT409_RS11330 NONE LT409_RS11325 NONE LT409_RS11320 2556100 .. 2556140 - -18.3 -3.60792 GTTCGAATTCCTAAA CGCGAACGGTCCTGCAGCA TGC TGCGGCAGGACCGTTCTTG CGAGGCGCGGCGACT 100 64 LT409_RS11300 NONE LT409_RS11295 2546701 .. 2546738 - -7.8 -3.09273 GCTGCGCAACAGAGA CGATCCGGCGCTTGCGTAG AAC CT-CGCC--CGCCGGATCG AGAACGAGGGAGGGC 56 267 LT409_RS11285 NONE LT409_RS11280 2543840 .. 2543852 - -4.8 -3.14881 CAACGGCGCCACCAA CCTC TTGCG GAGG TGCTGTTTCGGCATA 48 109 LT409_RS11275 2541909 .. 2541941 - -3.6 -3.21705 CACAATGTAACCGAA GGTAAAAGAAAT TGCGACAAT ATTTCTTTTTCC ACGCCTTCTTCACCG 45 479 LT409_RS11270 2541753 .. 2541774 - -11.6 -4.8048 TGCTCATATTAAAAA GGTCAGCC GCGAAG GGCTGACC TGCAATTTCTGGTCG 100 35 LT409_RS11255 2537189 .. 2537205 - -8 -5.08824 TGCCTATGCAAAAAA GGGATG TTCCC CATCCC CTTTAGCAACCAAAT 93 300 tatA 2536784 .. 2536821 - -19.3 -5.21709 CCTGATATGAAAAAA GCGGTATGTGCAGAGCGC CGA GCGA-CTGCACATACCGC GAACCAGACGAATGT 100 45 greA 2536238 .. 2536249 - -2.2 -2.53213 GAACGGCGCAACTCA CTAG TGTT CCAG CTTGAGAATGGTCAT 37 14 lysS 2534049 .. 2534079 - -19.8 -3.57561 TCCGAACCGCGGAAA GGCCGCTTGCGC GGCATAT GCGCAAGCGGCC TTTCGGAAGCGATTA 100 53 LT409_RS11235 2531133 .. 2531175 - -22.3 -4.49353 GCAGAACACAAGAAA CCCCTGCTCCTCGGGCTTCGA ATT TC-AAGCC-GAGGAGCAGGGG CGCTTAAGAGGCGAA 100 43 LT409_RS11230 2530047 .. 2530062 - -3.2 -3.05384 CGCTTGCCGATCGAA GAGCCT AGTC ACGCTC GCCCGGCTGGCGCAC 43 14 ispD 2529048 .. 2529095 - -17 -2.56596 GTGCCCACCAAGCGA GTTCCGCACGAGCCGAAACGCCC AGC GGGCGTTTCG-CGCGAGCAGGAC TGTCTGAGCGACTGG 83 69 ispF 2528402 .. 2528415 - -8.1 -2.53701 GAAAGACCGACGAAG CGTGC TCAT GCACG TGAGGAGGGCTTGGA 52 79 cysS 2526686 .. 2526706 - -16.1 -3.23216 GTGCACGACGACGAA GGGCGGCCA ACG CGGCCGCCC TTCGAGAATGTTCCA 85 59 LT409_RS11210 NONE LT409_RS11205 NONE LT409_RS11200 2523564 .. 2523593 - -23.6 -4.05446 TGCCGGAACGAGAAA CGGGGGCGGCCG TTCACG CGGCCGCCCCCG TCGTCGTTACGCTTT 100 32 LT409_RS11190 2520188 .. 2520210 - -17.8 -5.88565 TGCACAATAAAAAAA CGACGGATGC ATC GCATCCGTCG TAGCAAATATGGTGG 100 35 LT409_RS11185 2519613 .. 2519636 - -18.2 -3.59979 CGCCCGCAGTTGAAA GCCTCTCCGG AACC CCGGAGAGGC TTTTTCACGCCGGGA 100 45 LT409_RS11175 2517125 .. 2517156 - -15.2 -2.54325 GCGGCTGAAAGATAC GCCCCGGT-CGTCCC AAA AGGACGAACCGGGAC CAAAATAAACATCCG 76 153 modD 2515686 .. 2515730 - -6.5 -2.73007 AATATTGCCCGAAAC CGCGG-CTTTGGGGT-GACAG CGCAT CCGCCGAGCCCAAAGACCGCA CATCCACGGCGCAAG 50 44 LT409_RS11160 NONE LT409_RS11155 2513254 .. 2513288 - -20.8 -3.96148 CGGCCGCAGCAGAAA CGAAGCGGGCCCATCA TCG CGATGGGCCCGCTTCT TCATTTCGGAACAGC 100 41 LT409_RS11145 2510413 .. 2510447 - -22.2 -3.55563 ACCCCACCCCCGAAA CCGAGGAGGGAGCCGC ACC GCGGCTCCCTCCTCCA CTCTCAAACCCTCGA 100 61 LT409_RS11125 NONE LT409_RS11120 2504827 .. 2504839 - -2.6 -2.91144 GCAGGTCGGAAACTA GCCG AGCTG CAGC ACCGGATGCAAGTCC 40 10 LT409_RS11115 2504039 .. 2504062 - -11.8 -5.46657 CAGGGCAACAAAAAA TTCGACATCG CGAA CGATGCCGAA TTCCGAACCGCTTAC 100 54 LT409_RS11110 2503212 .. 2503222 - -2.4 -2.77182 CCCTACAGGTAATCA TCCG AAT CGGC CTGCAGCAAAGCCCC 39 2 LT409_RS11105 2502830 .. 2502844 - -8.5 -3.84406 GTTTGATGATAAGAA GCCGG CACTT CCGGC GAACGGAACCCTTAC 67 37 LT409_RS11100 NONE glmS 2500101 .. 2500111 - -4.6 -3.14132 GGCGGCGTCCACCAA GCGA GTT CCGC AGCGCAGCGAGGACT 48 94 acpS 2499373 .. 2499405 - -13.4 -2.52896 CGACCCGCGAATGCA GGCGCGCCG-CGCGA ACTC TCGAAACGGCGCGCC TCGCGCGGGACGATC 72 39 LT409_RS11085 2496983 .. 2497001 - -10.2 -2.79183 CCGACGGCGAGCAGA CGGTGCGC ATG GCGCACGG CACGCCGGCGTTGGC 60 333 LT409_RS11075 2495466 .. 2495486 - -14 -3.65314 TGCAATCGGGAAGAA GGCCCCGA AACGA TCGGGGCC TTCGCCTGTTTTCTT 88 120 ligA 2493267 .. 2493290 - -8.8 -2.50113 GAGCATCCGAGCAAT GCTCCCCG-TG AAA CATCGGGGCGC GACGGAGCCCGGGCG 56 43 LT409_RS11065 2490973 .. 2491026 - -9.7 -3.72051 TCCAACAAGCGCAAA CGGCGCCCAGTCCC-CCAACGCGCAA GCTCG TTACG-GTCAGCGGGAG-GGGCGCCG CGGTGCCCACCAAGC 71 116 LT409_RS11060 2489828 .. 2489840 - -10.5 -3.61178 CCCATCGAGCCGAAA CGCCC TGT GGGCG TTTCGTGCGAGCCAG 73 112 LT409_RS11055 NONE LT409_RS11050 2487749 .. 2487759 - -2.4 -2.70932 CGCGCGCCTCAAGCA TGGG AGC CCCC TTCCGTCGACCCGCC 39 8 LT409_RS11045 NONE LT409_RS11040 2485989 .. 2486012 - -5.3 -3.64703 CTTGTCGCACGGAAA GGATGGG CGTGTACGAT CCCATCC TTTCCTTGTCACTAT 57 59 modB 2484404 .. 2484451 - -10.5 -3.24232 TCCTTCCCAAAGACA CTCGGCTTGCGCAGCGCGGGATC CTTC GACTCCGCGCTGCGC--GCTGCG CTCAGGATGACAAGG 65 81 LT409_RS11030 2483196 .. 2483208 - -4.7 -3.06696 CGCGCGCTGAATACA CGGGC GAA GCGCG TTAGAGCGTGGGTCA 46 84 moaA NONE moaC 2481193 .. 2481213 - -4.6 -4.70659 CTTCACAGGTAAAAA CGACCCGA AAACG CCTGGTCG GCGAAAACCTGCAAA 73 169 LT409_RS11005 2475874 .. 2475920 - -12.4 -3.96216 CGGCGACGTAAAGAA GCCTCCCGCCTCTCGAAC TTTGCTTCCTT GTCCAAGAAACGGGAGGC GGTTCATAGCGATGC 86 87 LT409_RS10955 NONE LT409_RS10950 2462192 .. 2462205 - -3.8 -3.57144 GTTTCGATCGTCAAA CGCT CATTGT AGCG CATTACTCGTTCGAC 51 28 LT409_RS10945 2460767 .. 2460800 - -19 -4.76041 GAGAGCGACGAAAAA CGCGAGCGACAAGG ACAAAG CCTTGTCGCTCGCA AACGATTACGAAGGA 100 88 rplB NONE rpsS NONE rplV NONE rpsC NONE rplP NONE rpmC NONE rpsQ NONE rplN NONE rplX 2456597 .. 2456624 - -14 -3.55444 GGGTCATTGCTCAAA GGGGCGCGCCGC CGAA GCGCCGCGCCGC CTTCATGTGCTAGTC 86 35 rplE NONE LT409_RS10890 NONE rpsH NONE rplF NONE rplR NONE rpsE NONE rpmD 2453398 .. 2453428 - -21.2 -2.64274 ACTTCCGTAAATCGA CCATCGGCGTGCCG TTG CGGCACGCCGACGA ATCATTATATCCTAC 100 60 rplO NONE secY 2451551 .. 2451576 - -15.5 -5.60993 TGGCGCATAAAAAAA GCCCTGACCAG TTAT CTGATCAGGGC TTTTACATTTACCGC 100 45 LT409_RS10850 2450610 .. 2450640 - -13.2 -5.24989 TTATAGATGAAAAAA GGCGGGCGAGGC AGCTCAA GCCCCGTCCGCC TTCAAGATTGCGTGC 100 61 LT409_RS10845 NONE nagB NONE nagA 2446491 .. 2446504 - -4.5 -3.98826 CGATGAACGCAGAAA GCTAC CCCA GCAGC TCGCCTCGCAGGATC 59 13 LT409_RS10830 2444568 .. 2444612 - -7.7 -4.36914 GCGGCCGCGAGAAAA CCGCCGGCCCCGACCTCGAG TTCCTG CGCGAGGCCGTCGCCG-CAG CGGGCGACGTGCCCG 78 244 LT409_RS10785 2434447 .. 2434462 - -6.1 -3.5882 GATACCAGCCCGAAA TCGCG TTGCGG CGCGA CGAATACGATGGGCG 57 188 nifJ 2430727 .. 2430754 - -19.9 -4.65895 TCTCGGACGCAAAAA GCCCCCGACGC TCGTTC GCGTCGGGGGC TTTCGTTCATCGTGT 100 55 LT409_RS10775 NONE LT409_RS10770 2429736 .. 2429752 - -7.9 -3.01712 CCGTCTTGCGCAACA GGCGGCT GAA ACCCGCC CGTTCGCACGACGGC 56 157 LT409_RS10765 2424447 .. 2424462 - -11.8 -2.71144 GATCGTTCGGAAGGA GCCGCC CTCG GGCGGC TCCTTTTCTTGTTCG 65 99 LT409_RS10755 2422694 .. 2422727 - -3.6 -3.16742 TCGAAGCGCGACTAA TTGCGGCGGAGGCA GGTCAT CGTCCCCGCCGCCC CGCCTCATGCAGGAT 45 61 LT409_RS10750 2420971 .. 2421003 - -19.3 -4.63527 GCATGACGGGAAAAA GAGGAGGCCACCA AGTGTTG TGGTGGCCTCCTC TAGATGTTGTGCAAC 100 55 LT409_RS10745 2419551 .. 2419570 - -15 -3.9093 CGTAGTATAGAAGAA GGGAGGGC CGAA GCCCTCCC TTAGTGATCGTATGA 93 45 LT409_RS10740 NONE LT409_RS10735 2418292 .. 2418335 - -9 -2.50816 TGTGTATTTATCAAG CTGCCTGC-CGCGCTTTTCGG TGAAC CCGAAC-GCGCGAGCAGG-AG AATAATACGCTAGGA 56 144 LT409_RS10730 NONE LT409_RS10725 2418066 .. 2418083 - -2.7 -2.60244 GCTCTAACCAACTGA GCTACACC GCC AG-GTAGC AAAAAATGGAGCCTG 38 32 LT409_RS10720 2417961 .. 2417994 - -3 -5.22258 GAAACGAAAACAAAA TAACGACGCGTCCG ACAAAG CGGACGCGAAATAA TACAATGGTAGCGGT 83 31 tuf 2416658 .. 2416700 - -9.1 -3.35197 TCTCATACACATGAA TTTTCATGAGCGGGGCCCGCT TGG AGCGGGCCCCGC-CG-GATCA CGCTAAAACGGTGTT 63 39 rpmG NONE LT409_RS10705 2416294 .. 2416313 - -10 -3.98804 GTAAACGCCAAACAA GCAGCCTG ATCA CAAGCTGC TCATCCAAGCAACCT 78 67 secE NONE nusG 2415214 .. 2415231 - -4.8 -3.51329 TAGGTCGAATGAGAA GCCC-CG GTCCA CGCGGGC ACGCGACGCCGCTTG 52 52 rplK 2414592 .. 2414612 - -15.4 -3.67597 CGTTCTATCGAACAA CGGCCGCC TTTCC GGCGGCCG GTCATTCCCTACGTC 93 54 rplA 2413768 .. 2413793 - -16.3 -4.21194 GTTCATGATGCAAAA GAAAAGGAGCC TCTC GGCTCCTTTTC ATAGTTCGCGCTCGT 100 45 LT409_RS10680 2412556 .. 2412588 - -24.9 -3.06133 TAACTTGCCACCGAA GCTGCGGCACAGCGC GTG GCGCCGCGCCGCAGC GTTCCTTCCTACTGG 100 34 LT409_RS10675 2412313 .. 2412347 - -22.2 -2.60075 CCTGCCCGAACGAAC GGAAGCGCCCGCGGAA TCA CTCCGCGGGCGCTTCT TCGTCTCCCGTGAGT 100 7 map 2409626 .. 2409636 - -8.2 -3.59315 CGAATCACGCGGAAA GGCG GCG CGCC GATGAAGATGAAAGC 64 394 asnB 2406058 .. 2406083 - -19 -3.27525 TCCCCCGAAACGCAA CGCGCCCGGC TGGTCG GCCGGGCGCG CACACTCCAACACAG 95 46 LT409_RS10640 2400596 .. 2400616 - -4.7 -3.14463 AACGCCCTGGAGGAA GAAGCCA TCGACCT CGGCTTC GTGCACGGAACCTAC 47 514 LT409_RS10625 2396964 .. 2397016 - -30.9 -2.52464 CCGGGCCGCAACCCA TCATCGCCCGAAAAACACGCCTCAG CGG CTGGAGCGCGTTTTTCGGGCGATGA TGGGTTGCGACTGCC 100 61 LT409_RS10615 2395244 .. 2395257 - -5.3 -4.49756 TCGTAAACACGAAAA CTTAG TTAG CTAAG ATACGCCACGGGCGA 74 168 LT409_RS10610 2394449 .. 2394460 - -3.6 -3.28791 ATCCTCTTCGCAGAA GGCC CCTT AGCC TTCGACGTTCAAAAC 47 20 LT409_RS10605 NONE LT409_RS10600 2392256 .. 2392278 - -6.2 -4.56597 TCTTCGCCCGAAAAA CACGCTCCAA CGT CTGAGGCGTG TTTTTCGGGCGAAGA 74 55 LT409_RS10580 2386344 .. 2386393 - -25.1 -2.89668 CAAGAGGCGCAGACA GCGCAAGGGCCGGGCGCCGCGC ATCGAGA GCGCGT-GCCCGGCCCTTGCAC CGGAGAGGGAGGGGT 100 89 LT409_RS10575 2384390 .. 2384427 - -9.1 -4.07568 CGCGCCGCCGCAAAA CGTCGAACGGATGTTTC ACGT GAAACATCCGCGCCCCG TCTGCCGAACCCTCT 76 122 LT409_RS10570 2383443 .. 2383468 - -7.6 -3.56092 TCAGCAGGGGGCAAA GT-GGGAGACG AAGAG CGCCTCCCTAC TTCGCGCGGGGATGG 62 22 LT409_RS10565 NONE rsmH NONE LT409_RS10555 NONE LT409_RS10550 NONE LT409_RS10545 NONE LT409_RS10540 NONE mraY NONE murD 2373590 .. 2373603 - -3.7 -2.78816 CGAGGTCCCATGATA TGCGC AGGC GCGCC TCGCTTGTCACGTTG 41 57 LT409_RS10525 2372344 .. 2372358 - -4.2 -3.90744 CGCCGCCGGAAAGAA CGATCA GCA TGTTCG CTACCTCCTGCCCCT 59 26 murG NONE murC NONE murB NONE LT409_RS10505 2367531 .. 2367576 - -22.8 -3.54424 GCGCATGCTGTGAAA CAGACGGTTCGGGCTTTGCCG ACAAG CGGGAAAGCCCGAACCG-CTG CCCCCACGCTGACGC 100 252 ftsZ NONE LT409_RS10470 NONE LT409_RS10465 NONE LT409_RS10460 2357724 .. 2357750 - -11.5 -3.30124 TTCTACTCCTTAGAA CGTCGG-GCGGC GGCA GCCGCGCCGGCG AAGAATCGAATACGG 72 43 LT409_RS10455 2357454 .. 2357467 - -3.9 -4.26327 TACGCATTAAAACAA GTTTA TCAG TAAAC GTACTCCAAATTGTA 62 3 LT409_RS10450 2356535 .. 2356556 - -17.3 -6.34424 CGGCGAAAAAAAAAA CGCGCTCCC GGGC GGGAGCGCG TTTCGTCGTCCATGC 100 65 LT409_RS10445 NONE nirJ2 NONE LT409_RS10435 NONE LT409_RS10430 2352290 .. 2352300 - -8.2 -3.07043 GCGACGAGCCGAACA GCCC AGC GGGC TGTTCGTGCGAGCAG 56 94 LT409_RS10425 2351283 .. 2351327 - -20.2 -3.49475 TGCACGGGCACATAA GGC-CTGGTCGCAGATTCCGC ATAC GAGGAATCTGCGACCAATGCC CCGCGTTTTCTGCCA 100 115 LT409_RS10405 NONE LT409_RS10400 NONE hemA NONE hemC NONE cobA NONE ahbC NONE hemB NONE LT409_RS10370 NONE hemL 2338813 .. 2338830 - -3.3 -3.35542 CGTATCGCGAAAAAG GCCGGAT CCGC ACGCGGC GGGCGACCTTCCGGG 47 45 LT409_RS10360 2338690 .. 2338712 - -14.1 -3.60098 AGTGCGCATGCGAAA GCCCCGGGC GCGTT GCCCGGGAC GGTGCGAGGCTGGTG 88 36 thiC NONE thiM NONE thiE NONE thiD 2334604 .. 2334624 - -7.6 -3.2699 ACGACATCCAGAAGA CGAAGGTG CTGGC CACCTTCA TGGGCGGGACGTGCG 57 258 LT409_RS10305 2327030 .. 2327042 - -2.6 -3.02829 GACAGCGGGCGAAGA GGCC AGGCG GACC CTCGCGACGGGACCC 41 113 LT409_RS10300 NONE rrf 2323574 .. 2323616 - -27 -3.29511 CGGAGCCCCCCAGAA CGCGCGAAGGCCCCGCCTCC CGA GGGGGCGGGGCCTTCGCATG CCGAAACGCCCTCCG 100 41 LT409_RS10290 2321130 .. 2321160 - -15.4 -4.0896 AAAGCCGCTTGAAAA CACGTGGAGGGTCC TCT GGACCCTCCACGAT CCGTTCTATGACAGA 100 31 LT409_RS10270 2316709 .. 2316735 - -2.2 -3.19482 GCAGACGAGCAAAAC CACTCGTATTGC AGA GCATCAAGAATG TACAAGTGTAAGGCA 43 164 LT409_RS10265 2315036 .. 2315060 - -3.5 -4.76274 CAAACCAAGACAAAA CCGTCGAGC CCGAGCC GCTCAACCG GTCGCTACACCCCCA 74 30 LT409_RS10260 2312542 .. 2312557 - -4.6 -3.54516 GAAAAGCATGAAAGA CGCGCT CCCT ATCGCG CAAGAACAACGCCTG 52 48 rfbA NONE rfbD NONE rfbB NONE rfbC 2308782 .. 2308792 - -8.2 -3.05384 CTTCCCGGCAGGCAA GCGC ATC GCGC ACAAGGGTTCATCCC 56 276 LT409_RS10235 2306241 .. 2306263 - -7.7 -3.31792 GCAGCACCTTGAGAA CG-CCG-GGCG CTT CGCCGCGGTCG AGCGGGGCTTCAAGA 58 387 LT409_RS10215 NONE LT409_RS10210 NONE LT409_RS10205 2298435 .. 2298450 - -4.6 -3.5936 GCGAAACGTCGCAAA GCGGAT CGTC AACCGC AAACCGCACTCTCAC 54 37 LT409_RS10200 NONE LT409_RS10195 2296142 .. 2296154 - -3.4 -4.42851 GCAACAAATCTAAAA CGAT TCGCC ATCG CCTCTACGAGTGGGA 65 29 LT409_RS10190 NONE LT409_RS10185 NONE LT409_RS10180 NONE LT409_RS10175 NONE LT409_RS10170 NONE LT409_RS10165 2289841 .. 2289854 - -2.3 -4.57569 TGATCCGGCTAAAAA CAGCT TCCA AGCAG ATGCTTCATTCTCGG 67 521 LT409_RS10140 2280993 .. 2281009 - -3 -2.75074 CCTACCGGAACAGCA CTCTTC TTATC GAAAAG GCTATTCATCAAACA 39 34 LT409_RS10135 NONE LT409_RS10130 NONE LT409_RS10125 2277355 .. 2277373 - -4.4 -2.95841 AACGAGAATATCATA GCGAGCCA TAT TGGCACTC TCCTTATTTCAGCGA 45 77 glf 2276162 .. 2276178 - -4.4 -2.71593 ATAGCCATAAATGCA TCGAAG CCGCT CCTCGA CACCGTGATAGAGAT 43 116 LT409_RS10105 2272249 .. 2272272 - -7.4 -4.18018 TCTCCCTATCGAAAA CGACCAAGGG AGAC CCCTTATTCG TCGCTGCGCCATAAA 71 19 LT409_RS10100 NONE LT409_RS10095 2269604 .. 2269614 - -6.8 -2.72511 CCTAGCGGCCGAAAC GCTC TTT GAGC CGACAAGGCAGAGCC 50 1 LT409_RS10090 2268529 .. 2268556 - -14.2 -4.42464 AAGGCGGGAAATAAA GGAAGACCCCGA GCAT TCGGGGTCTTCT TGCATACTAAATGGC 100 41 LT409_RS10075 2264427 .. 2264441 - -2.8 -2.69151 CGGCTTCATAGACGA TACGCC TCG AACGTA TGGATCTCCCGATCA 39 1 LT409_RS10070 NONE LT409_RS10065 NONE LT409_RS10060 2261123 .. 2261146 - -2.3 -3.65991 ACTTTTTGAACATAA GCTTATCGG GAGCTT CCGATCCGC AGCGCCTAATCGCTT 49 31 LT409_RS10055 NONE LT409_RS10050 NONE LT409_RS10045 NONE LT409_RS10040 2256607 .. 2256619 - -2.6 -3.82665 GAGTATATCAGTAAA CGAG CCCCT CCCG AAGACCTCTCGACAG 52 105 LT409_RS10035 2253224 .. 2253249 - -18.3 -4.68124 TGAACACATAGAAAA CGCGCTCCCCG TTCT CGGAGAGCGCG CCGAATTAATGCAGG 100 61 LT409_RS10030 NONE LT409_RS10025 2249804 .. 2249849 - -15.6 -2.62184 CGTCTTCGTAGAGGA CGGGTCGG-AGAAGTAACGTT CGGCT AACGTGACCCCTGCCGACCCG ACGCGCACGCCCCTC 78 514 LT409_RS09995 2244488 .. 2244501 - -5.2 -2.63596 TCGCACGTCACAGCA CCGC GAGATA GCGG TCGCGCTCCCACTGC 43 4 LT409_RS09990 2243583 .. 2243597 - -11.4 -3.53012 TCCTGCTCGCGCAAA CAGCCC ACT GGGCTG TTTGGCTCGTGCGGA 74 215 polA NONE rplU NONE rpmA 2239829 .. 2239851 - -14.9 -4.80882 ATTGTATATGAAAAA TGCCCCCTG ACGAG CAGGGGGCA TGCGAAAACAGATAA 100 69 obgE NONE proB 2237211 .. 2237224 - -3.8 -3.05844 CCCCCTATTCGAAGA CGAC CAACTC GTCG CGATGGACGAGCGGC 43 1 LT409_RS09960 NONE nadD NONE yqeK NONE rsfS 2234138 .. 2234160 - -17.7 -5.99154 GACGAAACAAAAAAA CGCCGCCGC GGAAG GCGGCGGCG CAGGACGCATCGAAG 100 57 LT409_RS09930 2229038 .. 2229052 - -2.2 -2.63326 TAAAGATATAGTAAT TATATC CAT AATATA CCTTTTTCGCAATCT 38 67 LT409_RS09925 NONE LT409_RS09920 2228433 .. 2228455 - -10.4 -3.07443 TCACAGGGCACGCAA GGCGCTGCGC GAG GCGCGGCGGC GGATCGGGAACGCAA 64 79 secA NONE prfB 2224289 .. 2224305 - -2.2 -3.8579 ACTCAACAATGTAAA CAACAG GTTGG CTGTGG TGGTGCAGGTTGCCT 54 149 LT409_RS09905 NONE LT409_RS09900 2222313 .. 2222332 - -4.2 -3.92869 GCAGCGACGCAGAAA GCTGC-GAC GTG GTCTGCCGC GCGGGCGCCGCGTGG 59 152 ftsE NONE ftsX NONE LT409_RS09885 NONE LT409_RS09880 NONE LT409_RS09875 NONE LT409_RS09870 2216446 .. 2216459 - -3.1 -2.91912 GTATGTAGTTAGATA GTCAA AGTT TCGAC ATCGTCGGGCGGTGC 42 5 LT409_RS09865 2215910 .. 2215934 - -3.6 -3.55444 CCCGCAGGTCGCAAA CTCCTC-ACGC CTGC GCGTCGAAGAA GCCCTTCACCTTCTT 49 5 LT409_RS09860 2215334 .. 2215380 - -17.9 -2.52464 TCTTCCTCGAACCCA CGGCCCCGTTCGGGCCCCG TCATACAAG CGGGCCCCGTACGGGGCCC GATCAACGCGCGTTA 85 38 LT409_RS09855 NONE fabD NONE fabG NONE fabF NONE fabZ NONE LT409_RS09830 2208066 .. 2208116 - -17.8 -4.17491 AGGAAACGTTGAAAA CCGTTCGAGCGCCATACGGGAACGC ATGC GCGTCCCCG---GGCGCTCGAACGA AATGAACGGCTCTGC 100 63 LT409_RS09825 2205107 .. 2205132 - -13.3 -3.03771 GGACACCGTCGAAGA GCGCATCCTGC ATTT GCAGGATGCGA AGACCGACCTCGCCG 71 169 LT409_RS09815 2200552 .. 2200570 - -2.3 -3.8647 ACCCAGTATAGCAAA GC-CCGCG ACTC CGCTGCGC TAGCGCGTGCGCGCG 54 25 LT409_RS09810 2199324 .. 2199338 - -7.1 -3.41527 CAAGCCCGACGAGAA CAGCG GCGTG CGCTG GATGGACCTCGACGA 55 134 LT409_RS09800 2196365 .. 2196375 - -4 -3.28791 ACTGTTCTGGTACAA CTTT GAA AAAG CTCGGCTTTTCGGCC 47 42 cas5c NONE cas8c NONE cas7c NONE cas4 NONE cas1c NONE cas2 2190790 .. 2190804 - -4.9 -2.7487 TAGACAAACAAGGTA CACGC AACAA GCGCG TCAGGCATCTTTATG 43 103 LT409_RS09760 NONE LT409_RS09755 2183029 .. 2183081 - -7.6 -3.63515 TTCGAGCTCCAACAA GCGCG-CGATCC-GGGAAACGACGTC GTC GCCGGCGCTTCGCAGGCTCATCGCGC CTCCCCTCCGACATC 64 17 LT409_RS09750 2182462 .. 2182479 - -6.2 -3.61398 CTTCGCGCTCAAGAA CAGCGC CGAGAT GCGCCG GCTGCTGGAAGCGAT 57 62 LT409_RS09740 2179649 .. 2179670 - -7.1 -2.53715 CGGAGTACCATGAAG CGTCCGGCG CCGA CGGCGGGCG TTGCGGGCCTACCAG 48 34 LT409_RS09735 NONE smpB NONE LT409_RS09725 2176949 .. 2176981 - -22 -2.81464 CCACCACTGACGACA GGAGCCCCGTCGGC GCGCA GCCGGCGGGGCTCC TTTGCGTTTCCTAGG 100 51 LT409_RS09715 2174560 .. 2174582 - -17.7 -4.7254 ATTCGCGACGAAAAA CGGGCCCGC TCGAT GCGGGCCCG TTGCGTAGGATCGGA 100 49 murI NONE rdgB 2171360 .. 2171385 - -8.9 -3.84451 CCGCCGAAATGCAAA GGCGC-CCCGCC GAG GACCGGCGCGCC CTCAAGAGCGGCTGC 69 376 LT409_RS09685 2170416 .. 2170428 - -3.3 -4.38154 AGATGGTTGACAAAA GCGTG CAT CAAGC AGCAATTCACGCAAC 65 64 LT409_RS09675 2168964 .. 2169003 - -6.2 -3.87815 CTCGACCCCGACAAA GGCCTCG-ACCTCGAGCAG GTG CGGCGCGGGGTGCGCGACC TGAAGGGCATTCTCG 62 452 LT409_RS09665 2166769 .. 2166793 - -13.6 -4.86731 GGCCGGCAAAGAAAA GGCCGTGCAC ACTGG ATGCACGGCC TGCGAATTCGTGGAG 100 35 arcA 2164080 .. 2164093 - -2.3 -5.31091 CAGAACAAAACAAAA TACGC ACCG GCGGA TAGAGCCAAGTTTCC 85 154 argF NONE arcC 2162004 .. 2162035 - -2.8 -3.54424 TGGCATGCGCCGAAA CGCATGCCACCGCCC ATC GTGCGGAAGC-TGGG GGAAGCCTTCCGCTC 47 56 LT409_RS09635 2160201 .. 2160226 - -16.9 -4.62069 CCCGCACGCGAAAAA GGATCCCCCGC CGAA GCAGGGGATCC TCGAAACGCGTCGGT 100 70 argS 2157671 .. 2157689 - -17.4 -5.3236 ACAACGTATAAAAAA GGCCGCCC ATC GGGCGGCC TTCCTTCGAACGAAA 100 42 LT409_RS09620 2156774 .. 2156822 - -15.4 -4.15044 GCTGCCGCCAAGAAA GGC-CGAATGAGCCGACACCGGA AGAT TCCGATGCCAGCCCATTCGCGTC GTCTAGATTAGGTTA 100 91 LT409_RS09615 NONE LT409_RS09610 2155735 .. 2155755 - -11.1 -2.57132 CGCCTGCGCGAGAAT GTCGCCCTG ATG CAGGTCGAC CTGGAGGACAACGTA 64 86 LT409_RS09595 2151747 .. 2151800 - -8 -2.78384 TGCTGGGGGACGAGA GGCTGCTCACGCGCGCGGTGGAGA ACGCCA TCTCCAACGCGCGGCTGCACAACG AGCAGGGATGCACGA 51 325 LT409_RS09580 NONE LT409_RS09575 2146442 .. 2146465 - -9.5 -3.08867 GCAACCTTGAAGATA CGGCCGTCC CCGTTT GGACGCCCG TGCTCTACGATTTCG 60 356 LT409_RS09550 2141757 .. 2141773 - -3.6 -3.36289 CACGACTTCAACGAA CGGTTG TTGCC CGACCG TCACGAGCCGGGATG 47 259 LT409_RS09545 2141057 .. 2141082 - -16.2 -3.61398 GTTCCTCTGCAAGAA GAAGGGCGGC TCCAGG GCCGCCCTTC TTCTTGCACGCGTTG 93 41 LT409_RS09535 2139060 .. 2139073 - -5.2 -3.18507 AACATATTGCAGGAA CGCG AGCTGG CGCG CTTGCTGGACTACGA 49 505 tig NONE LT409_RS09515 NONE clpX 2134230 .. 2134260 - -11.7 -4.35524 CTCTCAAACCGAAAA GCGGGCGCGCCGC TCGTC GCGATCCGCCCGC TCGTTTACCGTATCC 93 51 LT409_RS09505 NONE LT409_RS09500 2130577 .. 2130599 - -2.5 -3.68366 GGATCGCAAAATCAA CCGCGCACC TCGAC GGCGCTCCG CACGCCCTAGCGCTC 49 32 LT409_RS09495 2130261 .. 2130275 - -4.2 -3.21199 CACTTACGAATCCAA CGCG GATTACA CGCG GTTCACCGACAAATC 48 17 LT409_RS09490 NONE LT409_RS09485 2128849 .. 2128861 - -6.2 -5.27938 ACGGCGAAAGAAAAA GGCG ACGAG CGCC CTTCCCTCCCTTAAC 90 517 loaP 2128052 .. 2128066 - -3.5 -2.84687 TCAACCACCAGCACA CGACC CTTGC GGTCA GCACCCCCCCCCCGT 42 55 LT409_RS09470 2127197 .. 2127207 - -2.4 -4.4727 TGAAGATGGACAAAA CGGG GAA CCGG AAATCAGCCATAGAA 66 131 LT409_RS09465 NONE LT409_RS09460 NONE LT409_RS09455 2123533 .. 2123553 - -8.3 -3.54459 TCAAGTCTTCGCAAA TGGCTTCGA TCA TCGAAGCAA CCTCTCACATGCGTC 62 14 LT409_RS09450 NONE LT409_RS09445 NONE LT409_RS09440 2119890 .. 2119906 - -2.1 -4.72846 CGAGAGAGCGAAAAA GCACGGA TCT CCCTCGC GCCTTGAAACACGGC 72 209 LT409_RS09435 NONE LT409_RS09430 2117518 .. 2117551 - -5.3 -3.54459 CCAAGCGCTCGCAAA CAGCGGCATGCACG AACCCGA CGC-CATGCGGCTG ACCTCCTGTTTGCTG 53 120 LT409_RS09420 2116884 .. 2116907 - -5.8 -4.60487 CACGACCTGGAAAAA CGCCGGGCGA AATA CCGCGCGGTG CCGAACAAGACAATA 76 159 LT409_RS09415 2115748 .. 2115787 - -16.6 -4.36914 GCCTTTGCGACAAAA CAA-CGAAGCCGCCCCG TTGTTCG CGAGGCGGCTTCGATTG CATTGCGAAGTGGTT 100 39 thrS 2113690 .. 2113716 - -20.2 -7.14698 AAAAAAAAAAAAAAA GCGACCCCGGCA CGC TGCCGAGGTCGC TGTCACGCGGAGGAT 100 54 LT409_RS09405 NONE LT409_RS09400 2112639 .. 2112685 - -23.9 -2.73364 CGGGGACGCGAAGGA TCCCATGCGGCGACAGCCG TGGCGCTTC CTGCTGTCGCCGCATGGGA TCCTTCGACTCCGCG 100 81 LT409_RS09390 2110977 .. 2110993 - -7.2 -3.27022 CGTATGGTACACCAA GCGCAG CCGTC CCGCGC GCCCCAGTTGGGGCT 54 39 LT409_RS09385 NONE panF 2108790 .. 2108810 - -8.9 -3.21099 TCCTGGGAGGAGCAA GCGGCGCTG CTG CAACGTCGC TCGGCCCGCAAGCGC 59 331 LT409_RS09370 NONE LT409_RS09365 2105982 .. 2106014 - -2.5 -4.56597 CCGCGTGCCGAAAAA TCGCACGCGGACG GACCAGG CGCGCGGGTGCGG AGCGCCAGAGGGCCT 66 59 trxA 2103495 .. 2103516 - -13.7 -5.00616 TGCGGGCGCAAAAAA GCCCCCTCC GAGC GGAGAGGGC TTCGCTGCCTCAGGC 100 52 LT409_RS09345 2100930 .. 2100942 - -9.1 -3.16564 GCGCTACTGCATCAA CAGCG CAG CGCTG CGCTTCGTGCCCTAC 60 284 trxB 2098550 .. 2098577 - -16.3 -3.61398 CCCGCGCGCCAAGAA CGCCCGCTCCA AGCATG CGGAGCGGGCG CCTATGCTGTAACTG 93 80 prfA 2097330 .. 2097351 - -9.5 -4.84642 TGCAAATCAATAAAA CCTGCAACA AAAA TGTTACAGG TTTTAGAGAATGCGA 100 92 LT409_RS09325 NONE LT409_RS09320 NONE LT409_RS09315 2094011 .. 2094035 - -7.8 -3.32963 ACCGGCAGCGCATAA GCCTGTCCCGC CCGC GCGGGAC-GCC GCGTCCTGCCGGAAG 59 84 LT409_RS09310 2092708 .. 2092752 - -21.4 -3.04144 GCTGGAGGCGTAAGA CGCCAGCGCGGAGCGCCGGCG CTTG CGCAGCCGCTC-GCGCCGGCG CTCCCCCTTCGCAAC 100 71 LT409_RS09300 2090358 .. 2090371 - -3.7 -3.67976 GCCATCAACGGGAAA GCGGG ACTG CGCGC CTTCGAGGCGTTCTC 53 230 LT409_RS09275 2086251 .. 2086261 - -2.4 -2.77182 GGGGAGATCGAAGGA GGGG TTT CGCC GTCGGCGCCTATCCG 39 85 loaP NONE LT409_RS09265 NONE LT409_RS09260 NONE LT409_RS09255 NONE LT409_RS09250 2081803 .. 2081815 - -3.4 -3.28791 ACCCCGTGCCGATAA CACA TCTCT TGTG GATGACGATCCCGCA 47 210 LT409_RS09245 NONE wecB NONE LT409_RS09235 NONE LT409_RS09230 NONE LT409_RS09225 2075413 .. 2075425 - -3.3 -2.86164 GCCGCAATCATTACA TCGTC TCC GACGG TTATGCGACCGACTA 42 413 LT409_RS09220 NONE LT409_RS09215 2072124 .. 2072134 - -2.4 -2.98942 AGCTTCGGACATATA GTGG ACA CCTC ATAACTCAACGATTA 41 104 LT409_RS09210 2070466 .. 2070482 - -5.9 -5.07652 GGCCCGAAAACAAAA CTAATCC CTT GGATTAA TTACGGCAACTATCT 85 113 LT409_RS09200 2067362 .. 2067407 - -27.6 -3.90112 GCGGGCGGAACGAAA GCGAGGGGCGGGGCCGCGCA CCGGAT TGCGCGGCCCCGCCCCTTCC GGTCCCCGGGCAGCC 100 40 LT409_RS09125 2051297 .. 2051317 - -3.2 -3.68256 TTGGCATGAAAAAAT CG-GCCCTC CTCT GACGGCGCG CGACCAGGCGCGCCC 51 122 LT409_RS09120 NONE LT409_RS09115 NONE LT409_RS09110 NONE LT409_RS09105 2045856 .. 2045868 - -10.5 -3.06183 GCCATCCGCATCCAA CGCGC GAG GCGCG TTTGTGGGGATGTCG 64 185 LT409_RS09100 NONE LT409_RS09095 NONE LT409_RS09090 2043660 .. 2043693 - -23.9 -3.02511 GGCAGCTTGCTAAGA CCGGCGCGGGCGCAT GGTT ACGCGCCCGCGCCAG GTGGCCGCTACGACG 100 33 LT409_RS09085 NONE LT409_RS09080 NONE LT409_RS09075 2041281 .. 2041291 - -4.6 -3.16881 CAGCCACGCGAGGAA CGCG ACG CACG CCGCCAGGGCCGCCT 48 57 LT409_RS09070 2040793 .. 2040809 - -8.7 -3.06915 AGGCACCTCAGGTAA TCCGACA CCG CGTCGGA GTTGCCGTAGAGGCC 60 182 LT409_RS09065 2040123 .. 2040147 - -10 -4.07133 GAGCCTCAGAAACAA GCTCCAGTGC TTCAG GCACTCGAGC AAGGAGTCGCTGGAA 78 305 LT409_RS09040 2034347 .. 2034361 - -4.2 -3.06183 GCTACCGGCACGGAA GCCTCC GCG GAAGAC GGGCGAAAGGGCTGT 46 59 LT409_RS09035 NONE LT409_RS09030 NONE LT409_RS09025 NONE LT409_RS09020 NONE LT409_RS09015 NONE LT409_RS09010 NONE LT409_RS09005 NONE LT409_RS09000 2025454 .. 2025469 - -2.4 -2.52464 CGCGTCTGGAAGTTA GCATGG GAGT CCGCGC CCCTTCATCTCGGCT 37 7 LT409_RS08995 NONE LT409_RS08990 NONE LT409_RS08985 NONE LT409_RS08980 2020429 .. 2020439 - -2.4 -4.25283 AGGCTCCGATCAAAA GCCG CTG CGGG ACGCGTCCAATGGCC 60 52 LT409_RS08975 NONE LT409_RS08970 2018113 .. 2018124 - -2.2 -4.33105 CAAGTATGACGAAAA CTCG GATG CAAG GTATCGAATCCCATC 63 71 LT409_RS08965 NONE LT409_RS08960 NONE LT409_RS08955 2015386 .. 2015400 - -7 -3.53091 AGCGGTTGGGCGAAA CGTCGC GGA GCGCCG GAAACCCCTCCTCGC 58 468 ilvD NONE ilvB NONE ilvN NONE ilvC 2009637 .. 2009662 - -20.5 -3.59979 TTCCCGCACGTGAAA GAAGGGGCCCG ACGT CGGGCCCCTTC TTTGTGCGAAGCCGT 100 103 serA 2007272 .. 2007292 - -5.3 -2.67055 AGAACAGGTAGATGA CGATGAGCG GGC CGAACATCG CGCCGCCGCTACAGC 46 34 nrfD 2006304 .. 2006317 - -4.5 -3.28924 CATCGCCGGCGAGAA TCGCG CATT CGCAA GCACGAAACGACGAC 49 135 LT409_RS08915 NONE LT409_RS08910 2004402 .. 2004448 - -18.7 -4.08692 GAACGGTGCGGAAAA CGCGGCGAAGGTCGCGAGAGC GGGAT GCCCTTGCGACCTTCGCCTTG CGAAAACGACGCCTT 100 450 LT409_RS08905 NONE LT409_RS08900 NONE LT409_RS08895 NONE nrfD 1999915 .. 1999947 - -20.7 -4.62069 GCCTGACCCGAAAAA GGCTCGGCAAGCG CGGGGAT CGCTTGCCGAGCC GTGATGCCGCAGCGT 100 64 LT409_RS08885 1998198 .. 1998231 - -21.7 -3.53012 GCCCTCTCCCGGAAA CGACGGCGGCCCGTC CGAA GACGGGCCGCCGCTG CCGGTTCGCTTCGCG 100 43 LT409_RS08880 NONE LT409_RS08875 1996969 .. 1997006 - -7.5 -3.59738 GACGACACGGGCAAA CCCCGCCGTTCGGGTCG TTGC CGAACGCATCGACGGGG CGAAGCAGAGGCCTG 60 61 LT409_RS08870 1996313 .. 1996332 - -7 -3.04144 GCGCTAGCGGGAAGA CTCGCGGC TAGC GCCGCACG GGCTCCTTCGGCTCC 52 85 LT409_RS08860 1993051 .. 1993062 - -5.8 -3.63627 TCCCTATATTCGAAA CACG CAAG CGTG TTTGAACCCTTATGC 57 132 LT409_RS08855 1991784 .. 1991805 - -18.7 -4.24948 GGACGACACGCAAAA CGCCCCGGC CGAA GCCGGGGCG TTCTTTCTTGCTTGT 100 53 LT409_RS08845 NONE LT409_RS08840 NONE LT409_RS08835 NONE LT409_RS08830 1985507 .. 1985560 - -2.1 -2.64616 TGCGCATGCATACCA TCCAGCTCGGTTCGCCCCTTCCGCGC GAC GCGCGGAAGGGGTTTTCCTCA-TGGT ATCACCGCGACAGGG 38 27 LT409_RS08825 NONE LT409_RS08820 1983747 .. 1983774 - -22.8 -3.57651 CCGCAGACGATAGAA GAAGGCCGGGGC AAGC GCCCCGGCCTTC TCGCATACAGGGGCT 100 75 LT409_RS08805 1980603 .. 1980627 - -9.2 -4.07568 CCGGGGGCGCCAAAA CGC-GGGCGCG TGCG CGCGCCGTGCG CCTTACAGGTTGTGG 76 28 LT409_RS08800 1979851 .. 1979875 - -15.8 -4.11216 CTCCGACCGCCAAAA GAACCGCAGC GGATT GCTGCGGTTC TTTTTTTTGCGCCGG 100 74 LT409_RS08790 1976957 .. 1976993 - -18.1 -5.07107 CAAACCGCGAAAAAA GAGGGATGCCTGCCG ACGTATG CGGCAGGCATCCCTG CAAACCTCGCTTGCG 100 58 LT409_RS08785 1975363 .. 1975403 - -15.4 -3.38991 ACCGGTTGAAGAAGA CGCTCG-TCGGGGGCTCGC CGCA GCGGGCCCCCGATCAAGCC GAAGAGCTGTTCTAG 89 54 LT409_RS08780 1974342 .. 1974399 - -11.1 -2.79004 CTACGTCGAAAAGAT CGGGCTCGTCGCGCAGAGCGTGCACCGC GAG GCCGT-CACGCGCTAAGCGACGCCCCCT CCGCCCGATCAGGCC 65 3 LT409_RS08740 1966398 .. 1966422 - -16.4 -3.66178 CGGGCGAAGCCGAAA CGGCCCCGGC AGGAG GCCGGAGCCG TTCGTCGTCAAGGAG 93 72 LT409_RS08735 1964565 .. 1964582 - -14.1 -3.35679 GCTCTGCATGCAGAA GCGCCCC GATC GGGGCGC TTCGCGTTCGTCATG 81 73 LT409_RS08725 1961404 .. 1961459 - -11.1 -3.61715 GATCCGGTGGAACAA CGGGATCGAGACGCGGGGACGCTGC TTGCAGCG GC-GCGCCCCCGCG-CTCGCTGGCG GCGCGTTACGCCTTG 77 31 aes NONE caiA 1959009 .. 1959024 - -5.4 -3.29511 GCTAGCGGTTCAGAA CCCGAA GTCA TTCGGA CACGGCCGATAGGCC 52 126 caiB NONE caiC NONE LT409_RS08700 NONE LT409_RS08695 1953013 .. 1953057 - -6.9 -3.69836 ATAAGGAATGCGAAA CGGAGAAGTCGCGACCAGGGG TTT CGCCTGATTGCGTTCGCTCCG ACGGCGTCCAACCGC 60 412 LT409_RS08685 1950191 .. 1950212 - -17.3 -3.53012 TTTTCGCCCTTGAAA CCCCCGGAC TCGC GTCCGGGGG TTTTGCCTTTTCCAG 100 166 fixA NONE LT409_RS08670 1946923 .. 1946935 - -7.7 -3.23853 CGCCCCGAACGAACA CGATC CCG GATCG GAGCATCCCGCGGTT 57 275 LT409_RS08665 NONE LT409_RS08660 1945189 .. 1945220 - -17.4 -4.25283 ACGGCGGCATGAAAA CGACCCCGACGATC TTTC GATCATCAGGGTCG CGAATATCTTGCAAA 100 65 LT409_RS08655 1944452 .. 1944488 - -18.2 -3.06796 CCGCATGCGACCGAA GGCCCTTCCATCCT-CG CTCT CACAGGATGGAAGGGCC TCTGGACCGACCCGG 89 66 LT409_RS08650 NONE LT409_RS08645 1941784 .. 1941802 - -3.1 -3.01924 TAGGTTGCGGGAACA CGCCCGCA AATA TGCG-ACG AGAATAATAACATAC 43 227 LT409_RS08640 NONE LT409_RS08635 1935225 .. 1935250 - -15.4 -4.67982 CGGGACGCAAGAAAA CGCGCCCGAC GAGCAA GCCGGGCGCG CAGGGGAAAGCGATG 100 240 LT409_RS08625 1932402 .. 1932429 - -17.2 -3.78962 CGAAAGACACGGAAA TCGGCCGAAAAA CGTG TTTTTCGGCCGA CGATGCGTCGCTCAG 100 37 LT409_RS08620 NONE nusA NONE LT409_RS08610 NONE infB 1927118 .. 1927165 - -22.8 -4.08216 CGATTTTCCCGAAAA GCGCAACGCCGCCACGGTAACC ACAA GGTTGCCATAGCGGCGTTGCGG GGTGGTGCCCACTAA 100 145 rbfA NONE LT409_RS08595 NONE truB 1924523 .. 1924536 - -2.4 -2.89564 CGTCGACCTTATATA TCTC TGCCAC GAGA CACCCCCGTTTGAAA 40 5 ribF 1923238 .. 1923257 - -5.6 -2.79183 CGGAGCTGCAGCAGA CGACCTGG GGCT CGAGGCCG TGCAGGAGCGCTACA 47 377 LT409_RS08575 1919082 .. 1919120 - -16.7 -3.63054 CAAATCGACACACAA CG-CACGGAGGCCCCGGC GATC GCCGGGGCCTCCGAATCA TGCGCATCGTGGAAG 100 49 LT409_RS08570 NONE LT409_RS08565 1915946 .. 1915972 - -13.6 -3.53224 CATCGCGCGCGGAAA CGGGTCTCGTCC TCA GGACGGGGCCCG TTCTTTTTGCCATGC 86 72 LT409_RS08555 1912736 .. 1912784 - -7.8 -4.25104 GTGTCGCCATGAAAA CCTCCTTATATCGTGAAAATATA CTAG CATATTTTCACGATATA-GACGA ATTACGGCCGCGCGT 75 27 LT409_RS08550 NONE LT409_RS08545 NONE LT409_RS08540 NONE LT409_RS08535 1908900 .. 1908930 - -19.8 -3.61398 CGTTGCGCGCAAGAA CGCGTTGCCCGC GGTCGTT GCGGGCAACGCG ACGCAGAACCTTGCT 100 426 dltA NONE dltB NONE dltC 1905578 .. 1905597 - -2.7 -2.78463 ACGCCGCGCAGCAGA CGCACGC CGGTTC GCGCCCG TTTGGACGCGGGCGC 39 75 dltD NONE LT409_RS08505 NONE LT409_RS08500 NONE LT409_RS08495 1901407 .. 1901438 - -3.6 -4.15222 ATGTTCCCGAACAAA TGTTTCGCGCGAAG CATT CGGCGCACGAAAAA ACCGCCGCTCCCTAC 62 37 LT409_RS08490 1898846 .. 1898878 - -6.8 -4.08692 GAACCGGCCCGAAAA CCAGCGCTGGCGGAG CGCT CGCAGCC-GCGCGGG GCGCGGACAGCCCGC 68 309 LT409_RS08485 1897959 .. 1897979 - -4.6 -4.08064 AATCCGGTCGGAAAA CGGCAGGG CGTTC CCCTATCG GCAATCCGGATGCGG 61 96 uvrC NONE rapZ NONE LT409_RS08470 NONE whiA 1892178 .. 1892211 - -8.1 -3.56092 CCACCATGCTGGAAA TCGCCGCCGGCAT GGCGACGT ACGCCTACGGCGA GAGCAACGTGGCCGT 63 261 gap 1890667 .. 1890688 - -15.9 -4.13654 TGTCTAAACGAGAAA CGAGCCTGC CAAG GCAGGCTCG TTTCGGGGAATGCTG 100 41 LT409_RS08450 1889412 .. 1889444 - -23.5 -3.64703 TCCTTTCCATCGAAA CGCCCCGGACGGGAA CCG TCCCCGTCCGGGGCA ATCGCCTGCTTGCTA 100 38 tpiA 1888575 .. 1888586 - -3.6 -3.40403 CTCCGTTGACGAGAA GGCC CTTC GACC CGCTTCGCTCGCCCG 47 55 gpmI 1886832 .. 1886852 - -10.3 -2.79183 CGTAGCGGGACGAGA CGGAGCGGG ACG CCAGCCCCG TCCCCCTCGCCTCAT 61 58 secG NONE LT409_RS08430 1886280 .. 1886297 - -11.3 -4.79352 GGAGGTATAAGAAAA GAGAGCC CTAA GGCTCTC TCCATTCTCTCTGGT 100 37 LT409_RS08425 NONE LT409_RS08420 1884562 .. 1884583 - -17.3 -3.34043 TCCATGATCGTACAA GCCCGTCGG CAAA CCGACGGGC TTTTTTCATGCCTCG 93 57 LT409_RS08400 1883936 .. 1883958 - -13.5 -5.5112 CGGAGCAACAAAAAA GAGCCTTCG CAGAT CGAAGGCTC TTTCGAATTCATGGT 100 37 thiS NONE thiF NONE LT409_RS08380 NONE thiH NONE LT409_RS08370 NONE LT409_RS08365 NONE LT409_RS08360 1877566 .. 1877623 - -30 -2.78395 AACGGCGAGGAATGA CCCGGTGCGGCCTCTGGTGCATCGCG CGGCTT CGCGATGCACCAGAGGCCGCACCTTT CGCGCGCGCCGCCTT 100 46 LT409_RS08325 1870155 .. 1870182 - -15.6 -3.30969 AGGCATCAAACCGAA CGGAAAGGGGCC TGCA GGTCCCTTTCCG ACAAGCGCTACTTCC 89 33 rnd 1867941 .. 1867972 - -10.8 -2.53759 AAGATTCGTAACTGA CGGCGCCGAGACGCC GGA GGCG-CTCAACTCCG ATGCTCCACGCGCAG 60 17 LT409_RS08310 NONE xseA NONE xseB 1865414 .. 1865428 - -2.7 -3.53012 TTCTCCTTCTCGAAA GCCGG TTTTC CCCGC TAGGACAAGCTGGTG 47 25 LT409_RS08295 1864974 .. 1865018 - -13.7 -4.21812 GCTCACCGAAAACAA GCG-TCGAGGCCGTC-TGCCG GACAA CGGCAAGACGACCTCGATCGA AGCGTATTCGCAGGT 100 48 LT409_RS08290 1863592 .. 1863629 - -27.9 -3.53012 CGCCTGCTTGCCAAA CGACGAGGCCCCCGC-GT TGA ACTGCGGGGGCCTCGTCG TTTACAGCTTCGTGC 100 43 glf NONE LT409_RS08275 1860020 .. 1860073 - -19.7 -3.25073 TTCGCAAGACGAACA CTGTCGCCCGAAACGGACGGTTT GAGCGGCG ATTCTGTCCGTTTCGGGCGACAG CTTCCGCTAACGGAC 91 60 LT409_RS08270 1858783 .. 1858803 - -6.8 -3.59979 GCCTGGGAGCGTAAA CGCGGC GTGATCGCG GCCGCG TCGCCCGAAACGGAC 60 86 LT409_RS08260 NONE LT409_RS08255 NONE cydC 1851840 .. 1851852 - -9.1 -3.06671 ATACCCATGCGAAGA CGCTC GAC GAGCG CGACAGCATGCTGTT 60 184 LT409_RS08230 NONE dnaG 1846451 .. 1846482 - -3 -2.66316 GCGTCGAGTATACCA TCCCTCGTCTTCG GCGTGCG CGAGG-CGAGGAA ACCGATCAAGAACGC 38 31 LT409_RS08220 NONE LT409_RS08215 1844924 .. 1844959 - -5.9 -2.70932 CGTCCTTCTGAATTA TGGGACGCGCCGCCC GTTTCA GGGCGGCGCGGGTTA TCGTCGGATTCGTAT 46 109 def 1844346 .. 1844376 - -5.4 -3.13403 GCGTGCCCATGAACA CGACGCGCATGGT TAGCGC ACC-CGCGCTTCG AGCGAGGTCTCCCCC 50 7 fmt NONE LT409_RS08200 1841935 .. 1841961 - -18 -5.42975 GTACATAAAGAAAAA CGGGCCCGGG CGCATGC CCCGGGCCCG CAGCGTCGCAAGGAC 100 49 LT409_RS08195 1840355 .. 1840370 - -6 -5.63517 TTTGGAAACAAAAAA GCGGCC CGAT GGCGGC GGCGACCCAAGTTGT 95 170 LT409_RS08190 1839580 .. 1839595 - -6.8 -2.73681 GATGCAGCGGAAGGA TCCGCC GCGA GACGGA TGGGATCATCGGATG 50 99 LT409_RS08185 NONE LT409_RS08180 1837001 .. 1837025 - -9.3 -3.97368 GTCCGAATGCATAAA CG-GCCGGAC TGGAGC GTCCGGCGCG CAGCTCTCTTGTCTA 73 38 LT409_RS08175 NONE LT409_RS08170 NONE LT409_RS08165 1834818 .. 1834834 - -2.1 -3.06302 ACCATGTTGACGGAA CGGCTCA TCG TGCGCCT CCTTCCACCTGCGGG 41 13 LT409_RS08160 1834160 .. 1834176 - -12.3 -3.17714 CGAAAGCCCGAGGAA GCGTACC TTG GGTACGC GACGAGGGCTTGGAG 74 138 LT409_RS08155 NONE LT409_RS08150 1831792 .. 1831829 - -19.1 -3.68351 GGGCGATGATGCAAA GTCGACCTGCCGACCGC CGGC GCCGCCGGCAGGTCGGC CCCTTAATCCTCGAT 100 29 LT409_RS08140 1830139 .. 1830164 - -19.1 -4.58283 CAAGCTCCGCAAAAA GGAAAGCCCGC TTTC GCGGGCTTTCC GAGCAGGTTTAGAAG 100 34 LT409_RS08135 1828516 .. 1828544 - -2.2 -2.58249 TATATTGTCCAGAAC CGGTTACGACGC GAAAA GCGCCGTTTTCG CAGCTGGGATAACGT 38 52 LT409_RS08130 1827273 .. 1827283 - -4.6 -4.20696 TGATCAACTTCAAAA GCCG CGG CAGC AGAAGCTTGATCCAC 65 467 amrA NONE amrS 1824523 .. 1824539 - -13.7 -3.95324 CATCTCCAATAAGAA GGTGCCG TTT CGGCACC GTAGATATGATAGCG 91 87 LT409_RS08110 1824391 .. 1824408 - -14.1 -4.4261 CCGGGAATACGAAAA GCGCCCC GATC GGGGCGC TTGCGTTTCTGGCGG 100 35 LT409_RS08095 1819760 .. 1819781 - -2.3 -3.29511 GGCACCCGCGCAGAA TCGT-GCC AATGCGA GGCGACGA GGTAATGATACCGTA 44 101 LT409_RS08090 NONE LT409_RS08085 1817961 .. 1817982 - -2.9 -3.78775 GCGCTCAGGATGAAA GCATGCACGG CCT CCGCAC-CGC CTGCAGGACGACAGC 52 60 yedF 1817192 .. 1817209 - -2.7 -3.61398 CGCGTTGTCGAAGAA GATCATA GCTC CACGATC CTTACGTCTCGGCCC 49 45 LT409_RS08075 NONE LT409_RS08070 NONE LT409_RS08065 1814706 .. 1814739 - -23.9 -2.80492 GATCAGCATGAAGTA GGGCCGCATCGCCCC GAAG GGGGCGATGCGGCCG GCGGACGTTGCACGG 100 293 LT409_RS08055 1812526 .. 1812545 - -7.8 -3.03124 CTGCATGTCGCAATA GTGGTTCG TCAT CGAACCGC GACCGAATGTTGCTG 56 66 LT409_RS08050 NONE LT409_RS08045 NONE LT409_RS08040 1808180 .. 1808227 - -11.3 -2.73364 GCCGGAGTCGAAGGA TCACGCGCGGCG-ATAGCCG CGGCGCTTC CAGCTTGGCGCCGCGCGTGA TCCTTCGACTCCGCG 65 146 LT409_RS08035 NONE fdhD 1806398 .. 1806413 - -6 -3.57263 AGGCGCACGGCGAAA CCGGGC GCGT GCACGG CGAAACCGGATGGAT 57 62 LT409_RS08025 1805492 .. 1805510 - -5.8 -3.53012 CCGCCTGTTGCGAAA GCGGGGGC GCA GCTCACGC AGCAGGCTTCTCGCC 55 20 LT409_RS08020 1804387 .. 1804407 - -3.2 -5.15634 GAGGGCATGAAAAAA GCCTCCGC GACAG ACAAAGGC TTCGACTCGTCGCGC 80 264 pyrR NONE LT409_RS08010 NONE LT409_RS08005 1801383 .. 1801414 - -23.1 -3.30124 GGGCATCGCGCAGAA CGGCCCCGCATCG TTCGCT CGATGCGGGGCCG CGTGGTTCGAAGATC 100 56 LT409_RS08000 1799554 .. 1799579 - -10.3 -5.24129 CGCCCCTACAAAAAA GCGCCTCCATC TGAT GTGGGAGGCGC ACGGATGCAGGGTGT 100 438 carA NONE carB 1794733 .. 1794759 - -6.5 -3.36273 TTGGGGCAAGATGAA GCGGACAGG TTTCCGGGT CCCGCCCGC CGTTCATCTCGACAA 56 46 LT409_RS07985 1794016 .. 1794039 - -6.6 -3.58343 TCGATCAGCTTGAAA CCGCG-GCGCC CAG GGCGCTCGCTA GCGCAACTCCAACAT 60 23 LT409_RS07975 1793110 .. 1793132 - -6.3 -4.4078 GGCTTGGAACGAAAA CGGCTCGACG TACT CGTCGAAC-G ACAACGCCACGTACT 73 406 LT409_RS07965 1791992 .. 1792002 - -6.8 -3.01712 GCCGTCGCGGCAAGA CACG ATC CGTG TCATCGCCCTTCCTT 52 26 LT409_RS07960 1791242 .. 1791282 - -3.9 -3.73224 CGAGCCTCCATGAAA CGACGCG-CGCCTCCCGGC GGCAA GCCACGATGCGTCGCA-CG GGCGACACGGTGCGT 54 63 LT409_RS07955 1790524 .. 1790541 - -4 -3.1364 GACGGAAGGAGCGAA CGGCGG GGCCTA CCGCCT GCGTCGCACGGGAGC 45 17 LT409_RS07950 1789448 .. 1789502 - -12.1 -3.14564 GGATCCCTCCACCAA GCGAGTTCCGCACGAGCCGGACAGCCC GGC GGGCTGTCC-GTGCGAGCAGGACT-GC CGAGCGACTGGAGGG 74 88 LT409_RS07945 NONE pyrF 1787617 .. 1787643 - -8 -4.07568 CCTTCTGTTCCAAAA CGATTCCGTGAT ACT ATCACGCATTCG CCCACTTCACCTTGT 71 166 LT409_RS07935 NONE gmk NONE LT409_RS07925 1786242 .. 1786256 - -11.4 -3.0094 TTCGATGCAGAGAGA TCGCGC GTA GCGCGA AACGAACACGCAGGT 68 203 thiI 1784939 .. 1784972 - -21 -4.19177 ACGGGGCAAGAGAAA GCGGCGCCCCCGAG GTATCT CCCGGGGACGCCGC TTTTGCGAGCTTCTG 100 54 LT409_RS07915 NONE LT409_RS07910 NONE holA 1780279 .. 1780316 - -21.3 -3.25823 CCGTCCGCATATCAA GAGCGAAGGAGCCCCGG AAAT CCGGGGCTCCTTCGCGT TAGAGGGCTGTTATC 100 120 LT409_RS07895 1778809 .. 1778837 - -6.6 -2.90496 CTGTCTTTCAAATGA CG-CGCGCTCGCA CGCA TGCGGGCGCTTCG GGAAAACGGAGCCTA 51 79 lepA NONE LT409_RS07885 NONE dusB NONE hemW 1774635 .. 1774646 - -5.8 -2.63382 CGGGAGACGCACAAG GAGC GGGC GCTC GTCAGTCGGCCAGAT 46 27 hrcA 1773462 .. 1773478 - -11.5 -2.87211 ACCTTTCCTCATAGA CGGCGCA GGA CGCGCCG CCTCCCATGTCGTTT 66 39 dnaJ NONE LT409_RS07860 NONE LT409_RS07855 1769857 .. 1769876 - -5.8 -3.6692 GCCTATCGGAAAACA GAGGC-ATT TCG AATCGCCTC ATTCAAGAAAGGGCC 57 330 LT409_RS07850 1768530 .. 1768583 - -7.4 -3.16683 AGTGCAGGTGATCAA GAT-C-TGCCGGGAACGGCGAGGC GGTTCGAG GCCGCGCCGCTCCCGCCTCGCATC TTCGCCCCGAAAACA 54 106 LT409_RS07845 NONE ybeY NONE LT409_RS07835 1766535 .. 1766548 - -9.5 -3.19602 TGCGTTAGACGAACA GCGCC GCAA GGCGC GGGACGAACACGGCG 61 1 era 1765429 .. 1765446 - -4.7 -4.14243 GATTGTAGCCGAAAA CGGGCCG AGCG CAGCCGG ACAACGCCCCGTTTG 61 152 LT409_RS07825 NONE recO NONE LT409_RS07815 1762319 .. 1762332 - -3.1 -4.1196 AATCGACGCCGAAAA GCGCCT GGA AGGC-C GGCGAGGTGCCCGCG 60 499 LT409_RS07805 NONE LT409_RS07800 1759829 .. 1759846 - -3.3 -3.86015 CAGGTTCCGCACAAA GCGCCGA CGCT TCGAAGC CGCGCCCCCATCAGG 56 68 rpsO 1759294 .. 1759309 - -11.8 -4.18018 CGCCTCTATGTAAAA GCCCGC CAAG GCGGGC TTTCATACGCTAGAT 89 35 LT409_RS07790 1756898 .. 1756923 - -20.5 -2.70932 GCCCTCCCGCAACGA CGAAGGGGCCG CGTT CGGCCCCTTCG CTCGAATCAAAACCG 95 42 dapB 1756010 .. 1756024 - -2.1 -2.80113 TATTATCCCACGAGA TGAGCC CTCA GGC-CA TGAAGTTCTCCAAAC 39 18 dapA 1754856 .. 1754876 - -13.9 -2.62184 GTCGCGGTTATATCA TGCGCCGCG ATG CGCGGCGCT TCGGTCCTTCTTCAT 72 175 LT409_RS07775 NONE LT409_RS07770 NONE LT409_RS07765 1749008 .. 1749032 - -7.8 -2.52516 CGCTCCATGACGAAC GGGTTCTCCG ACCGG CGGAAACCCC TAAGCGGCGGATGTT 52 25 LT409_RS07760 NONE rimO NONE pgsA 1745580 .. 1745592 - -3.3 -3.57144 GCCGCGAGCGCCAAA GACGC TGA GCGTT TGCCGCTTACCATTA 51 209 recA NONE LT409_RS07740 1743602 .. 1743618 - -5 -5.29782 CATAGGCATAAAAAA TCCCGG AAAAA CCGGGC ATGAACGAACGCACG 89 216 rny NONE LT409_RS07730 NONE LT409_RS07725 1740408 .. 1740421 - -2.3 -3.05384 CTCGTTTTCAGCGAA TCTCG GGGA CGGGA CGGTGGGCATCGTCG 41 4 miaB NONE miaA 1737883 .. 1737902 - -15 -2.7035 TCGATGCAGAGACGA GCACGCCG GCAT CGGCGTGC GAAGACAGTCGGGAG 77 172 hflX 1736493 .. 1736528 - -29.1 -3.14564 CTACCCTGCGACGAA GCGAGCCGCCCCGGG TCGATG CCCGGGGCGGCTCGC TTACCTTAGAGTTAC 100 42 LT409_RS07700 1735230 .. 1735242 - -9.1 -3.87994 ACGCAGCCGCAGAAA CGCAG CAT CTGCG GGTTATGGAACGGCC 73 65 LT409_RS07695 1733364 .. 1733389 - -3.1 -3.41795 AAACCTGCACGAGAA GCGCTCCTTCC TATC GGACAACGCGC ACGTGAGTATCGCCC 49 10 nrdR 1732814 .. 1732830 - -2.2 -3.83214 GCAAAGGAATCGAAA CGCGCT CTATC AACGCA ATCCCTCCAATGCGG 52 18 dut NONE LT409_RS07680 1731809 .. 1731821 - -9.1 -2.90496 GGGTTTTGCAAACGA GGCTC TGA GAGCC GTTCTAAGGCCCTAT 59 118 LT409_RS07675 1731204 .. 1731245 - -9.5 -4.86621 ATTCGGAAGCAAAAA GCAAAGCGCTGCGGGTT CCGTGCAT AACCTGCAGCGCTTTAT GCGGTTTCGACAGCG 100 48 LT409_RS07665 1729249 .. 1729290 - -21.1 -2.59564 CGGCGACGGCATAAT GCGA-GCGACCGTCTTAGAG TTG CTCTAAGACGGTCGCATCGA CCGCTGCAGAAGGAG 100 48 LT409_RS07660 1728342 .. 1728361 - -16.4 -3.2218 TCCAAGACGGAGGAA GGGCCGGC ATAT GCCGGCCC TTCTCGTTCGTATCC 85 249 wecB 1726880 .. 1726911 - -5.8 -4.70659 GTCGAGAGCGAAAAA GGATGGATCGTCGCC GTG GACGACGA-CCTTTC GTGCGCGGAGCGAGA 79 296 LT409_RS07645 1724034 .. 1724079 - -2.4 -3.70902 GTCGTCAGACTGAAA GCGTTGCCGAAGAGGCCTCTC CCGTC GCGAG-CCTCTAGGCCGACGC CCGCTTGCGCGCGGG 52 14 LT409_RS07625 NONE LT409_RS07620 1720277 .. 1720309 - -3.2 -3.97689 CACAAGCGGAAAGAA GCGGCTTGCCCTCG CGATC CGAGAAATCGCCGC AGTCCCGTCGAGGGA 56 133 LT409_RS07615 1719107 .. 1719119 - -3.4 -3.7732 CGCGCATACGAACAA GAAG GGGCG CTTC GGGCTGGCCATCGAT 54 260 LT409_RS07485 NONE LT409_RS07480 NONE LT409_RS07475 1687175 .. 1687227 - -33.9 -2.62184 CTTGCCTGGACATCA TCATCGCTCCGAAAACACGCCTC GTGCGCT GAGGCGTGTTTTCGGAGCGATGA TGATGTCCGTCGGCG 100 513 LT409_RS07450 1681460 .. 1681488 - -17.5 -2.56596 TGGCGTAGGAACGGA TGCAGGGCGCC TTGGACC GGCGCCCTGCA TCTTGCGGCGGCCCT 83 44 LT409_RS07435 1677861 .. 1677882 - -6.5 -2.82623 GCGCGCCGAGAAGGA GCGCACGCGC ATG GC-CGTCCGC GACACGCCGTCGGCT 49 441 LT409_RS07415 1672297 .. 1672321 - -10.7 -3.08133 GACTCATCGAGGCAA CCGACCTCGTC AAG GACAAGTTCGG CGAATCCGCGGTCCG 63 323 LT409_RS07405 1669680 .. 1669693 - -5.9 -3.02144 GGAGGGCGTGGAAGA GGCCG TCGT CGACC TCGATGCCGGCACCG 48 173 LT409_RS07385 1665591 .. 1665626 - -19.2 -4.27316 TCGTCGAATGGAAAA CACGCACGGATGTTTC ACGT GAAACATCCGTGCGTC GCGATGCCGAGGGAT 100 82 LT409_RS07365 NONE LT409_RS07360 NONE cadA 1659436 .. 1659459 - -3.1 -4.57569 TCATCGCCCGAAAAA CACGCAAAA CGGCCT TCTAGCGTG TTTTTCAGGCGATGA 68 124 LT409_RS07350 NONE LT409_RS07345 1658386 .. 1658418 - -16.4 -4.0896 AAATCCTCGCGAAAA CGGGAAACGCCGCCC GTTC GGACGGCGTTTC-CG CATGCGGGCCGCCTT 100 39 LT409_RS07340 1658006 .. 1658020 - -8.6 -3.24532 AAAATGATATGAATA TGACGT TTT ACGTCA AAACATGCAGCCGGT 57 45 LT409_RS07335 NONE LT409_RS07330 NONE LT409_RS07325 NONE LT409_RS07320 1655397 .. 1655434 - -5.6 -3.06133 TAACGGTCTACGGAA CAGTGTGCCAT-CCCGCG CTTG CGCGGGCATGA-ACGCCG CATGACGGAATTGTC 49 78 LT409_RS07315 NONE LT409_RS07310 1651728 .. 1651748 - -2.5 -3.59979 TGCGCGCACGGTAAA GC-GACCG TCCTGT CGGCCCGC ACGCCCCTCGCGGAA 49 59 LT409_RS07295 NONE guaA 1648648 .. 1648678 - -10.5 -3.62597 GTCATTTCGCAATAA GAATGCCCGTCAA AACAG TAGACAGGCATTC TAACAGGTATTATGA 73 61 LT409_RS07285 NONE LT409_RS07280 1647310 .. 1647361 - -10.8 -2.94099 GGCTCTCAGTAGAGA TCGGATGCGGAGCACTCTTTGAGA TCAA TCTCAGAGGGTGCCCCGTATCCTT ATTCTCACTTGTTGT 62 75 LT409_RS07250 NONE LT409_RS07245 1641057 .. 1641069 - -4.8 -2.87344 TATCCTCCTTAGAGA GCGA TGAGG TCGC GAATGCTTTTGAATA 45 6 LT409_RS07240 1639878 .. 1639916 - -5.3 -2.77344 GGAGTCGGCAAGAAG CTCGGCG-CCG-AATACGA GAT TCGCGTTACGGACGCCCAG TAGCGTTCGATGGGC 46 135 LT409_RS07225 1635926 .. 1635941 - -3.9 -4.1711 ACCATCCTGAAGAAA CGCGA GGCGTA CCGCG AAGCGTTCGACGGCT 62 458 LT409_RS07195 1628310 .. 1628325 - -6 -3.48276 GCTTTCGGGAGACAA GGCGCG GGCG CGCGAC TACATCCTGGGCGTC 55 465 LT409_RS07185 1623864 .. 1623877 - -3.7 -3.61398 GCGCTTCGGGAAGAA CGCGC TTCT GCGTG GCACCAGCCTGAAGG 53 486 LT409_RS07150 1612251 .. 1612288 - -8.9 -2.78384 GCGGCCCCGACGACA CGTCGGGGCCGCTTCCG TTTT CGGACGCGACGCCGGTG CAAGGGGGTTCGCCG 57 310 LT409_RS07110 1603510 .. 1603552 - -3.3 -2.94747 GCATGCGATTATACA CGGCGACG-AGGCGAAGGCT TCGG AGGACTCGCCCGCATCGCGG GCTTCGCGCGCCGGC 42 45 LT409_RS07105 NONE LT409_RS07085 1597536 .. 1597552 - -5.8 -3.13403 CGCGTTCGAGGAATA CGACGA CCTGC TCGCCG CCGTCAAGCAGGCTA 50 45 LT409_RS07075 1596316 .. 1596357 - -11 -3.53091 AGGCGCGTTCGGAAA GGCA-GA-TGCCGCGTTC-GC TTC GCAGAACGCGGCGTTCGTGCC GCTACCAGCGTTTGA 74 27 LT409_RS07070 NONE LT409_RS07065 1594056 .. 1594080 - -8.4 -3.44229 ACCCGACCAGCAGAA GCCGGCCGGC GTGCT GTCGGGCGGC GAGCGCAACCGCCTG 62 421 LT409_RS07050 NONE LT409_RS07045 1589993 .. 1590030 - -10.6 -3.28924 GACGCTGCGCGACAA CCTGCG-CATCGGGCGCG AGGA CGCGACCGACGACG-AGG TATGGGACGCGCTGG 65 435 LT409_RS07000 1577525 .. 1577539 - -5.6 -3.59979 CGGCGTGATGGGAAA GCGCGT GAA ACGTGC AGGGTACCCGATGCC 57 92 LT409_RS06980 1572893 .. 1572919 - -14.4 -2.50622 ATACAGTGGAGGAAT GCGCCTCGGCCA AGC TGCCCGAAGCGC CGCCTCGCCTGTTCT 76 57 LT409_RS06945 1563325 .. 1563342 - -2.6 -3.87815 GCCTACGGGGACAAA GCGGAG TAGGGT CTCGGC ATGCGGGTCGAAGGC 54 45 LT409_RS06935 1562210 .. 1562237 - -13.6 -3.53012 CGTTGTCGCCCGAAA GCCGC-GTTTTCA GCG TGAAAACAGCGGC TTTCGGGCGACAACG 86 78 LT409_RS06835 1541607 .. 1541656 - -3.6 -4.07568 GCGGTTCGGGGAAAA CCCATCAGAGCGCCACTTCGCCGTC GCC GAAGGCAAAGCAGCGA-C-GA-GGG ACGAACGCGCATGCG 59 200 LT409_RS06830 1540486 .. 1540502 - -2.1 -4.85782 GGCGGTAAAAAGAAA GTGCGAG CGT CTTGCTC GTCTTTTTTCCGGTG 72 103 LT409_RS06825 NONE LT409_RS06800 NONE LT409_RS06795 1533187 .. 1533210 - -18.2 -4.72272 TCGGCGGACGAAAAA GAAGCGGCCC TTGC GGGCCGCTTC CCAAACATGGATCGG 100 52 LT409_RS06790 1530550 .. 1530596 - -8.4 -4.87037 AACATACATCAAAAA GAGGTAAGATAAC-AC-CCTCT GCAAA AAAGGTATCGTTATCTTACCTC AACAAAGTCGAAGCC 93 196 LT409_RS06770 1526646 .. 1526673 - -7.8 -5.45802 TCCGCAAAAGAAAAA CGCTGCAATCTC AAAA AAGATTACAACG CTCTCTAAATCCTGT 100 62 LT409_RS06765 1525750 .. 1525774 - -6.4 -4.77157 CCAACGCAGGAAAAA CCAACATTGG AAAAA CCTACGTTGG AAAATCCAACGCAAT 85 359 LT409_RS06755 1523771 .. 1523788 - -2.6 -3.85698 CTCCGGTTTTAGAAA TCCGTC ATCGAA GACGGC TCGTTCTCGTTTTCT 54 1 LT409_RS06750 1521496 .. 1521522 - -23.8 -3.09516 CCTCGCATGATCGAA GGGCCCGCAGCA CCG TGCTGCGGGCCC TTTCGCGTTCGGCGT 100 197 LT409_RS06660 1504230 .. 1504242 - -10.5 -3.73224 TGAGCTCGCACGAAA CGCCC GCT GGGCG TTTCGGCTCGTGCGG 76 185 rpmB 1485328 .. 1485343 - -11.8 -5.02439 AGAGAACGACAAAAA GCCCGC GCGA GCGGGC TTTTCAATGTCGGCT 100 72 LT409_RS06545 NONE LT409_RS06540 1477885 .. 1477914 - -3.5 -3.75153 CCTTGCCAACCGAAA GGGCGGCTTTGACA ATC TATCCGAGC-GCCC GTCGTCTCGTCTCTC 54 171 LT409_RS06470 1463857 .. 1463879 - -22 -3.18264 CCTGCGATCGACGAA GCGCCCGGCC GTC GGCCGGGCGC TTCTCATTGGGGCGA 100 57 LT409_RS06445 1458876 .. 1458893 - -14.1 -4.36411 CATGAACGAGCAAAA GCGGCCC TTAG GGGCCGC TTTTTTTTGCATGCA 100 58 LT409_RS06425 1456322 .. 1456339 - -11.3 -4.30416 ACCATGAATTCAAAA GCCTTCC TTTC GGAAGGC TTTTTCATATCCTCA 93 38 LT409_RS06415 1455961 .. 1455988 - -15.6 -5.24129 CCGCCGCATAAAAAA CCGGTTGCGCGA GTCG TAGCGCAACCGG TTTCGATTTTCCTGG 100 38 LT409_RS06375 1445546 .. 1445558 - -4.7 -3.14132 GCTGGTGTGGAGCAA GGACG AGC CGGCC GTGCGCCGCGTGGCG 47 314 LT409_RS06360 NONE LT409_RS06355 1438413 .. 1438432 - -9.4 -2.66326 TTAATTGCAAATGTA TATGCACA TATT TGTGCATA GATTGCAGAGGTGCA 56 208 LT409_RS06350 NONE LT409_RS06345 NONE LT409_RS06340 1434665 .. 1434679 - -2.7 -4.07568 TCTGCTTTGGGAAAA CGCCC CTTGT GGGAG GTGGTGCGATCTTTC 57 262 gltX NONE LT409_RS06330 NONE LT409_RS06325 NONE LT409_RS06320 1430115 .. 1430134 - -5 -3.54424 GTGTACCTGCGCAAA CCCTAC GGCTACGT GTAGGG TTCGCCTGTCCGTCC 52 72 LT409_RS06300 NONE LT409_RS06295 1425577 .. 1425590 - -5.9 -3.34962 GGTGACAGGGGAGAA GCCGA ACGT CCGGC AAGACGGCGCGCAGG 53 54 LT409_RS06275 NONE LT409_RS06270 1418213 .. 1418233 - -4.5 -2.72144 TGACGCTTTCGAAAC CCGCGGCGC TTA GCGCGTCGA CCGCCTCGTTCCAGT 43 14 LT409_RS06265 1417683 .. 1417697 - -3.4 -3.53224 CATTTCGTGCTCAAA CCGCCG AAT CTGCGA GGCGCCCTAAAGGAT 49 32 LT409_RS06245 NONE nth NONE LT409_RS06235 1409206 .. 1409225 - -4.2 -4.07885 GATTCTGCGGGAAAA GC-GTCCGC TTC GGGGACAGC GCGCTCCCGCGGGCC 61 75 LT409_RS06230 1408461 .. 1408478 - -3.3 -3.29144 GGAGGCGGCGGACAA GC-CCGTC AGC GCCGGAGC GCCTCGGCTCGCTTC 47 13 LT409_RS06225 1407336 .. 1407349 - -5.9 -3.14931 CGGATCGCGCATGAA CGCGG CGCG CCGCA TCGTGCGCGCCATCT 49 432 LT409_RS06200 1403244 .. 1403254 - -6.8 -3.14931 GCCATTCGGGAGCAA CAGC GTC GCTG CACGATCTCAAGCTG 51 268 LT409_RS06185 1401721 .. 1401740 - -15 -3.76224 TCGGCACTGACGAAA GGACCCGG GAAA CCGGGTCC TTTCACGTCCGGAGT 93 161 pheA 1396646 .. 1396664 - -4.4 -3.40403 CGCCCGCTACGAGAA GCCCGCCA CCG TCGCCGGC GGCATCGTCCTCATC 49 258 LT409_RS06120 1386742 .. 1386761 - -13.6 -4.34402 TCCCCGATACGAAAA GAACCCGC CGAA GCGGGTTC TTAGCATTCAGATGG 100 38 LT409_RS06115 1386552 .. 1386569 - -14.1 -5.5112 TCGAGCAAGAAAAAA GCCCGCC GATC GGCGGGC TTTCTGTATTCAGAT 100 40 LT409_RS06005 1359168 .. 1359182 - -6.4 -2.82516 GGCTGGAGGACGAGA TCGCCT ACA AGACGA TCCGCGCCGACCGCT 49 429 LT409_RS05990 1357413 .. 1357439 - -13.7 -5.56673 ACCGACAATAAAAAA CGAGGCCGGGA ACGGA TTCCGGCCTCG TGTCGTTTTACCTGG 100 38 LT409_RS05975 1352700 .. 1352726 - -9.3 -3.27475 TGGTGGACTATAAGA CCGGCGGTTCG GACGG CGAGGCGCCGG AAGCGCTGTGCTCCA 62 494 LT409_RS05960 NONE LT409_RS05955 1345382 .. 1345406 - -17.2 -5.30616 GCAGGCAAAGAAAAA GGCCGGAAGC GATGA GCTTCCGGCC TGGCATTTCGTGGTG 100 36 LT409_RS05950 1343694 .. 1343739 - -12.7 -2.76696 CGGGCGCCGAACAAC CAGTATACGCTCATCGG-TCGA CCT CCGGTCCGATGAGCGCATAATG CACAAACCTGGTACC 69 69 LT409_RS05945 1342009 .. 1342040 - -21.6 -3.34398 CTCGTCCTTGAAAGA TGCCGAAGGGGGCC GTGC GGCCCCCTTCGGCG GTGTGGGCTTACTTG 100 34 LT409_RS05925 1337871 .. 1337903 - -16.2 -4.65895 GCGTCTATGCAAAAA CAGCGCCCCGTCGG ATAAG CCGGCGGGGCGCTT TCGTTAGGGGAGGAT 100 60 LT409_RS05905 1335662 .. 1335718 - -10.6 -3.00003 CGAGGACAAGAACTA GCGATTGGCGGTTGAGCGGCGGCCCCG AAGA CGGGGCCGCCGCTTTTCCGG-ATCGGC TTGACGGCGAAACCC 64 234 LT409_RS05855 1325698 .. 1325723 - -21.9 -5.20154 ATAGAACCCAAAAAA GGGGCCGCTCG ACGC CGAGCGGCCCC GTCCGCGCGAAGCGA 100 46 LT409_RS05850 NONE LT409_RS05845 NONE LT409_RS05840 NONE LT409_RS05835 1321278 .. 1321311 - -20.5 -4.72272 CCCGGTCATGAAAAA GCCTCCCATTTCTCA TGTC CGAGAAATGGGAGGC GGTTCGATCGCGCGG 100 61 LT409_RS05825 NONE LT409_RS05820 1314873 .. 1314895 - -3.3 -3.53012 CGGTTGCGTGCGAAA GGGGCTG GGCGCGAGG CGGCCCC GGCGTCTGCGTCGGG 49 75 LT409_RS05815 1313501 .. 1313511 - -6.8 -3.29837 GGGGAAAGATCAACA GCCA TGA TGGC CTCCTTCTGGTTCAG 56 123 LT409_RS05810 1312357 .. 1312372 - -6.2 -4.49556 GTTCGAGCAAACAAA TGTTTC ACGT GAAACA TCCGCGCGGCATTTG 74 229 LT409_RS05790 1308198 .. 1308220 - -16.2 -3.63805 AGTCGATATGCGAAA GCGGCGGGCC TCC GGCCCGTCGC TTTTTTGCGCCCGGT 93 152 ahcY 1305147 .. 1305173 - -14.5 -5.48825 GATCAGGTAAAAAAA GAACCCGATGC GTCAT GCACCGGGTTC TTTACCTGCAGGAAA 100 61 LT409_RS05740 1294914 .. 1294965 - -5.1 -3.88232 GGTGGGAGAGAAGAA GCTTTCGCCGCGTCCTCGCAGGCCG CTGC CGGGCTTCG-GGAAACGCCGAAA-C AGTTGCGTACGGTCT 59 39 LT409_RS05735 1294178 .. 1294208 - -9 -3.7108 ATGCTTATATCGAAA GGTTCACCATGCTT GGG AGGCATGAAGAACC TCAAGCAGCCCTTGA 71 64 LT409_RS05730 1293637 .. 1293659 - -12 -3.54424 CCTGACGCGTTGAAA GGAGCGCC GGGAAGG GGCGCTCC TTTCGCGTTGGGAGG 74 63 LT409_RS05725 1291813 .. 1291833 - -2.3 -3.53012 TTTGCCGGCGGGAAA GGGCCCTGG CTA CCTCGGCTC GCGGGCGGTTGCCGC 47 14 LT409_RS05720 1289717 .. 1289727 - -2.4 -4.38154 ACATGGTGTAGAAAA GCGG CTG CCGT CTTTCTATCGTCCTA 63 473 LT409_RS05675 NONE LT409_RS05630 1270930 .. 1270951 - -5.1 -3.62275 ATCGACGACTTCAAA GGCGTGAACG ATA CGTTCG-GCC ATCTGGCCGGCGACG 55 329 LT409_RS05620 1268002 .. 1268027 - -14 -2.75992 CTCCACGGAACACCA GGCCACCGGC TCTTTC ACCGGTGGCC CTTTTCGTAGTTAGG 73 185 LT409_RS05605 1265614 .. 1265645 - -21.6 -3.14881 GAACTTCGGGATGAA CCGGGGCTCGCTGC AAGG GGAGCGAGCCCCGG TATGGGCTACGCGAC 100 40 LT409_RS05600 NONE LT409_RS05595 1263665 .. 1263684 - -12.8 -2.75481 CTCGAATCGGAAGGA GCCCGCCA TGCG CGGCGGGC TCCGATGTCGTCAGC 69 48 LT409_RS05590 NONE LT409_RS05585 NONE LT409_RS05580 1259545 .. 1259560 - -8.2 -3.75169 CATGACCGCAGGAAA CCACGC CGAA GCGCGG CGCGCCAGGGGCCGC 67 167 LT409_RS05575 1259246 .. 1259258 - -4.7 -3.08706 AAGTATAGCCGAAGA GCGGG CGC CTCGC GCGGCGACTACGACG 46 33 LT409_RS05570 1257716 .. 1257731 - -6 -4.07568 TGTTGTTCCTCAAAA CCGGCG TGTG CGGCGG CTTCACCACGTTTTC 66 273 LT409_RS05560 NONE LT409_RS05555 1254423 .. 1254438 - -6.2 -4.1552 GATGGTTGGAACAAA TGTTTC ACGT GAAACA ATCTGGCGAAGACCT 68 336 LT409_RS05475 1235991 .. 1236001 - -3.2 -3.68351 TTGGCAGCACGGAAA CGAG CTT CTCA CGGAGGCGGTCGGGC 51 220 LT409_RS05425 1225233 .. 1225279 - -9.4 -3.03159 TCAAGGGCGGCAAGA CGCCGC--CGAAGGCATCGAGC TACCT GCCCGACGCGCCCGATGCGGCG CCGGCAGCCGCGGCA 59 305 LT409_RS05410 1222689 .. 1222704 - -6.2 -2.87211 ACGCTCTCGTACAGA TGTTTC ACGT GAAACA TCTGTACGGTTTGCG 48 58 LT409_RS05405 NONE LT409_RS05400 NONE LT409_RS05395 1219257 .. 1219284 - -21.4 -2.66316 TCGTTGATCATAGCA GGAAAGCCCGGC GCGC GCCGGGCTTTCC GTGGACGTGCGATCG 100 51 LT409_RS05390 1217862 .. 1217897 - -18.4 -2.77899 CTTCTGCAGCAAGCA CAGCGAACGGCTCGGTC GAT GACCGGGCCGTTCG-TG CGTCCAGGGACGATC 86 133 LT409_RS05305 NONE LT409_RS05300 1200749 .. 1200769 - -3.8 -3.14132 GGTCGTCGCCATCAA CTCGGCGC TGCTG GCGGCGGG CATCGGCGGTCTCGT 45 119 yihA 1197533 .. 1197558 - -17.7 -3.75332 ATTCCTCAAGCGAAA GAAAACGGCCC TTCG GGGCCGTTTTC TTTCGGGTGCATGCT 100 51 LT409_RS05265 NONE LT409_RS05260 1190859 .. 1190885 - -19.4 -4.19953 GACGCAACGTGAAAA CGCCCGCCCGCA TTT CGCGGACGGGCG TTTTCGGTTGGCTCG 100 62 LT409_RS05150 NONE LT409_RS05145 1163526 .. 1163564 - -3.1 -3.05343 GGTAGATGGCCAACA CCATGCAGGCGAACGCCA GCGC CAGCGT-CACCCAGATGG GGAGAGGATGGCAAG 43 14 LT409_RS05140 NONE LT409_RS05135 1162121 .. 1162143 - -22 -3.35679 CTTTGGCATGCAGAA GGCCCGCGGC AAC GCCGCGGGCC TTCGTTGCGCGTTTG 100 58 LT409_RS05120 NONE LT409_RS05115 NONE LT409_RS05110 1155269 .. 1155285 - -3.5 -3.01712 GCTCGCGCTTGAAGA CTTGCGG GTT CCGCCCG GTAACAGGCTGCATG 42 480 LT409_RS05075 1148625 .. 1148635 - -5.4 -3.35867 TCAACGTGTAAGGAA TTCG TTC CGAA CCCCCTTTGAACAGG 52 65 asnB 1142590 .. 1142617 - -11.2 -3.05463 AGCTCGCCTAGCGAA CGCGAAGGGCCC CGTA GGGCCCTTCGTT CGTTTACGCCGCCGG 68 29 LT409_RS04910 NONE LT409_RS04905 1108156 .. 1108170 - -7.8 -3.65046 CGGGCACGGCAAGAA CGAACC AGA GGCTCG CGTTTTAGCGACACT 63 278 LT409_RS04865 NONE LT409_RS04860 NONE LT409_RS04855 NONE LT409_RS04850 NONE LT409_RS04845 1096099 .. 1096114 - -4.6 -2.53015 ACATGCTCGAACGCA TCGCGG GAGG CCTCGA CACTACGTCGGTCGG 42 63 LT409_RS04835 1095418 .. 1095439 - -15.9 -3.06696 CTTCCCGGTAACAGA GGACGAGCC CGTG GGCTCGTCC GGAGAAGTGGTGCTG 82 186 LT409_RS04825 1093373 .. 1093385 - -6.2 -3.33261 GTTCAACCCCCACAA GGCG CACCT CGCC GCCGGCGATTGCATC 53 261 LT409_RS04810 1089589 .. 1089635 - -11.8 -3.78934 GCGCCCCGACAAGAA GTAAAG-CCGAA--CGGCCCCGG ATCC CCGGGGCCGTTTTCGATCTCTAC CGTTCAAACAGGTCG 80 22 LT409_RS04795 NONE LT409_RS04790 NONE LT409_RS04785 1082163 .. 1082178 - -4 -4.09805 CCAGGAAGAAGGAAA GTGC-TC GTC GATGCAC CGTTCGATCGAGTTG 59 172 LT409_RS04770 1079163 .. 1079178 - -4.8 -3.53224 GACGTGCGCGGCAAA TATACT TGTA AGTATA CTTGCTAGATGCGCT 52 116 LT409_RS04765 NONE LT409_RS04760 NONE queA 1077141 .. 1077186 - -8.8 -4.26076 CGACGCTCACCAAAA CCGGCGACTTCC-CCTACGCC CTTGC GGCGTTGGCGGCGGCCGTCGG CGCGGCCGCCGTGCT 77 153 LT409_RS04690 NONE bfr 1054553 .. 1054602 - -5.1 -2.71011 ACCCGTTGTCAACCA CCGTTCAGCGGGTTCGCGCTTTA TCTCGG TAAAGTGCGAACCCGCTT--CGT CCTCGCGTCGCCGTT 43 46 LT409_RS04665 1053227 .. 1053262 - -2.6 -4.08945 AGGAGGGTGCGAAAA GCGA-ACCGCGACGCC TTCTTT GACGT-GCCGTATCGC CTTGGAGTCGTTACT 57 36 LT409_RS04610 1044224 .. 1044241 - -4.7 -4.46112 CGGTACCGAAAGAAA GCGGCCG CGCC CGATCGC CGCTCCGAATGAGGG 70 72 LT409_RS04605 NONE LT409_RS04600 NONE LT409_RS04595 1040125 .. 1040149 - -5.5 -3.14132 CGGCGGCGCGACGAA CGTCGTGCCGG ACG CCTGCACGCTG GCGGGGGAGTGCCGC 49 439 LT409_RS04585 1038435 .. 1038445 - -2.4 -2.77242 TACAAGAATTACAAG GCGG GCA CGGC GGCCGGATCCAGCTG 38 271 LT409_RS04575 1037085 .. 1037107 - -11.2 -3.14132 GCCCGCCGTCATGAA GCGCGAGGAC GAG ATCCGCGCGC ACATGCGTCGCCTTC 66 226 sdaAA 1033535 .. 1033567 - -7.8 -3.53444 GGATTGCGCGTCAAA TGCGGGAGTCAGAAC GAAT GTCCTGACTCCCT-A TTCGGCGCATGATGC 62 509 LT409_RS04535 1025279 .. 1025294 - -11.8 -3.53012 CGTTGTCGCCCGAAA GCCGCG TTTT CGCGGC CGAAACCGAGGCTTT 74 134 LT409_RS04515 1021893 .. 1021933 - -15 -2.6342 GGGCAAAGCAACTCA TG-GCTCAATGCAGCCATCT TGA AGATGGCTGCATCG-GCGCA CAGCTATTCTTCTTG 76 55 guaA 1019957 .. 1019982 - -19.1 -4.89966 AGATGTAAAAAGAAA GCCCTCGAACC AGAG GGTTCGAGGGC TGTTATTCCCACTAT 100 131 LT409_RS04500 NONE LT409_RS04495 NONE LT409_RS04490 NONE LT409_RS04485 NONE LT409_RS04480 1015389 .. 1015401 - -9.1 -2.96711 TCGATAAGCGAGAGA TGCGC CGA GCGCA TCGAGGACGCCGCGC 59 192 LT409_RS04470 1014268 .. 1014293 - -23.3 -3.54424 CCGGATTCGGGGAAA CCCGGCCCCGG GAGC CCGGGGCCGGG CGCGCCGCCTAGGAG 100 34 LT409_RS04465 NONE LT409_RS04460 1012322 .. 1012341 - -7 -2.78384 GCCCGCGGCATGACA GGTCCGAG GCCG CCCGGTCC CCAAGTGCTATGGAC 50 68 LT409_RS04455 NONE LT409_RS04450 NONE LT409_RS04445 1009810 .. 1009837 - -21.4 -3.67112 ATTAGATGCCAAGAA GAAGAGGCGGGC AATT GCCCGCCTCTTC TCACATCACCCACTT 100 105 LT409_RS04350 NONE LT409_RS04345 NONE LT409_RS04340 NONE LT409_RS04335 983920 .. 983932 - -4.8 -3.78934 TTTGTCGGACAATAA GTGG CTTAT CCAC TGGGGATAAGTTCGG 57 75 LT409_RS04330 NONE LT409_RS04325 NONE LT409_RS04320 NONE LT409_RS04315 978855 .. 978891 - -20.3 -4.20868 CCTGCAAAAGAAGAA GCCCACGCTCAAGGT AATATAG ACCCTGAGCGTGGGC ATTGCCGCGGCAAGA 100 52 LT409_RS04310 976781 .. 976817 - -3.6 -4.74103 GGCTTAATGGAAAAA CCAGCAGCCGTTGTAGC CGCA GCTACGCCAGCCAC-GG CGGCTCCTTTGAACA 74 376 LT409_RS04305 974596 .. 974627 - -8.7 -3.60296 GACCTTGATGTTAAA GCCATCTCTCTCT GGCAAA AGAGGGGGATGGC TGCTCTCTTTAATAT 68 501 LT409_RS04300 974336 .. 974347 - -2.2 -3.8917 TCCGAACTACAAGAA TGAC CTTT GCCA TCGGTCCGTACGGGC 54 40 LT409_RS04280 NONE LT409_RS04275 968553 .. 968592 - -16.4 -4.89852 CGATATGCATAAAAA TCACCCCCCCCCGAAACA TCAA CATTTCGGGGGGGGGGGG GGTGATTCGCAACTG 100 386 LT409_RS04270 967320 .. 967342 - -6.2 -3.07994 CGCAATCTCATGTAA TCCTGCGCAG CGC CTCCGCACGA GCGCCTGATCGCGTC 49 73 LT409_RS04265 NONE LT409_RS04260 NONE LT409_RS04255 NONE LT409_RS04250 961229 .. 961252 - -5.2 -5.35224 GGTACAAAAAGAAAA GTGTCTCTTG ATGC CACGAGGCAC TACTGATAAGTAATA 90 351 LT409_RS04245 959501 .. 959536 - -12.5 -3.09289 GACGACGCGAATATA TCTGCGACGCACCGC AGAGGA GCAGCGCGCCGCAGT CGATAAAGCTATTGA 72 34 LT409_RS04205 NONE LT409_RS04200 947630 .. 947648 - -5.9 -3.08464 TGACGATGCATTCAA GCGCTCG TCAAT CGAGGGC GGTTCTAATTCAGGT 49 30 LT409_RS04195 946873 .. 946901 - -8.7 -3.53012 CGCGGGCGCGGGAAA GCGGCGATCGAGC AGC GCGAGATCGTCGC TTCTATACTGCGTGC 66 199 thpR 946184 .. 946213 - -4.8 -2.73875 TTGTGGCGAAGACCA TGTGGGCGCTCG GCCAGA CGAGCGACCCCG ACGAGATCCGCGACC 44 84 LT409_RS04180 943732 .. 943753 - -5.7 -3.33696 GCCGGTCCGAAGGAA CGCTGAGCG GCCA CGATCCGCG TTTTCTGCACGAGTT 52 74 LT409_RS04175 941765 .. 941816 - -2.8 -4.63527 GGAGCACGCGAAAAA CCCGCCGCGCCCGTTCGAGCC CTCCATGCTGC AGCGCGA-CGCGCTCGGCGCG CTGTTCGAGCTGTCC 72 435 LT409_RS04165 939234 .. 939274 - -3.4 -3.72576 TGGCGCTTGAGGAAA TGCAAGTGCCCTTGAGCGAG CGG CTCG-TCAAGAGGA-TTGCG CAGGCTATCAACAAG 54 436 LT409_RS04155 938230 .. 938264 - -6.5 -4.09685 CGTGACCGGCGAAAA CG-GCGAGCACACCCAC GTG GTGGA-GTACTCGCTCA AGCTGGACTCCAACC 68 253 LT409_RS04135 931637 .. 931665 - -9.5 -4.56597 GCCCGCGCTCAAAAA CGAGCGCATCG CCACGTT CGACGCGCGCG AGCTGGAAAGCCGCG 86 347 LT409_RS04125 929415 .. 929445 - -5.9 -3.33361 GACGAACTACACGAA CATCGGCGCCGTG TTCCG CTCGGCGGCGGCG CTGGGCATCGACGCG 53 435 LT409_RS04115 928094 .. 928131 - -17.1 -2.90615 ACCGCGCGCAAAGCA TGATCGCATAACGCCCG TCGG CGGGCGTTATGCGTTAA AGGGGGAGTCAGAAT 85 222 LT409_RS04105 926077 .. 926087 - -3.2 -3.79906 CGACGTGCACAACAA GCAA GAG CTGC TCGACTTGGTGCGCG 54 127 LT409_RS04095 922711 .. 922748 - -11.1 -5.06585 CAAAGCACAGAAAAA GAACGCGCGCGGGCCTC CGAA GAGGCCCGCGCATGCGG AGGGAGGGAAGGAAG 100 68 LT409_RS04085 NONE LT409_RS04080 920936 .. 920955 - -5.6 -2.64155 GCTGCTGGAAACCGA CGCCCCGTC CCA GGCGGG-CG AGCGCTACGATGCGC 45 174 sufC NONE sufB NONE LT409_RS04025 NONE LT409_RS04020 NONE LT409_RS04015 NONE LT409_RS03985 901566 .. 901591 - -11.1 -5.06414 TGTTTTCAAGAAAAA GGCCGGAGCTCC GAG GG-GCTTCGGCC TTCGCGAACCGGTTG 100 62 LT409_RS03980 NONE proC 898033 .. 898060 - -17.2 -3.53012 CGCTGTCGCCCGAAA CGGACGGTTTTT CGCG AAAAACCGTCCG TTTCGGGCGACAGCG 100 80 LT409_RS03950 888954 .. 888972 - -4.4 -3.01924 CAGGGTGCGGGAAGA CGCGCGGC CGC ACAACGCG CAAATGACCTTATTT 46 66 LT409_RS03945 887067 .. 887099 - -22.8 -3.53012 CGGCGGGCCGCGAAA CGACCGCGGCCGCCC CGGA GGGCGGCCGCG-TCG AGAAGAAGGCGGAAG 100 79 LT409_RS03920 NONE LT409_RS03915 881747 .. 881761 - -11.4 -3.25072 CGTAGCATAAGCGAA CCCTGC CGA GCAGGG CGTTACGCAAGGCTC 69 84 LT409_RS03910 NONE LT409_RS03905 NONE LT409_RS03900 878627 .. 878637 - -6.8 -2.53876 CTCGAGCGGAACCGA TCGG CGC CCGA TCCCCTGCGGGGTCG 48 62 LT409_RS03890 NONE LT409_RS03885 875460 .. 875474 - -3.4 -2.52464 GTGCCTTCGAAGGCA CGCCGG AAC CCGAGG AGCCTTCGAAGGCGA 39 48 LT409_RS03765 NONE LT409_RS03760 842084 .. 842094 - -5.4 -3.53012 GTTCGCGGCGCGAAA CTTG CTC CAAG TCGCCACAAGTCCGT 55 143 LT409_RS03750 841522 .. 841553 - -26 -3.36803 GAAGCGGAGCGAGAA CGGGAACAGGCGCC CGCA GGCGCCTGTTCCCG AACGAAGCCGATGCC 100 50 LT409_RS03730 836684 .. 836733 - -4.3 -3.09516 GGCGCGACCATCGAA GCCG-T-TCGCAGGAGAGCCG GGGAGGGGGT CGGCTCTCCCGCGTGACCTGC TACTTCTCGGCCACC 46 25 LT409_RS03725 834801 .. 834846 - -7.6 -3.10796 CGCCATCACGGAAGA CGGCCA-CGAGCTGCTTTCCT GGTAG AGGACAACAGCTCGGTTGTCG TTCCTCGAGGCGCAT 56 188 LT409_RS03670 NONE LT409_RS03665 822086 .. 822096 - -6.8 -3.16564 CCCCGAGGGCACCAA CGAG CCC CTCG ACCACGTCGCCACCG 51 246 LT409_RS03600 NONE LT409_RS03595 808852 .. 808869 - -5.5 -3.53444 GCACGTGCGTTGAAA GCGCGAA GTAT TTGGCGC GTTTCGGTCGTCCGT 55 62 LT409_RS03535 796840 .. 796851 - -5.8 -3.53012 GTGCTTCGGGCGAAA CTCG GAAA CGAG GCGGGCGCGTCGGCG 55 98 LT409_RS03530 795271 .. 795314 - -13.6 -2.70932 GTCCGGCGCGAACCA GCTTGCCGGCGGCGCGGGCC AGCT GGCCGGCGGGGCGGGCGAGC TCAGCAGCGGCATGA 71 319 LT409_RS03510 NONE LT409_RS03505 788328 .. 788355 - -17 -2.91912 TCATTTACGCATATA TGCGCAGACGCG GGCA CGCGACTGCGCA TCTGCCCGCGCCACG 85 43 LT409_RS03500 787179 .. 787191 - -4.7 -3.71848 GGGCGGCAGGAAGAA GGACG AGT CGGCC CTGCGCTGGCGCAAG 58 235 LT409_RS03490 NONE LT409_RS03485 NONE LT409_RS03480 NONE LT409_RS03475 784323 .. 784342 - -3.4 -2.79096 ATGAGATAAAGGAAT CCCTTGAG GGTG CGCATGGG CTACTCCTCCTCCGC 41 26 LT409_RS03470 782318 .. 782329 - -2.2 -3.7732 CTCCTACATGAAGAA CTCG GGGT CGAA GAACGAACGGGCCTC 52 2 LT409_RS03465 NONE LT409_RS03460 NONE LT409_RS03455 NONE LT409_RS03450 NONE LT409_RS03445 NONE LT409_RS03440 NONE LT409_RS03435 NONE LT409_RS03430 NONE LT409_RS03425 765912 .. 765941 - -17.8 -3.18274 GGGATGTCAAGCGAA GGGGCCCGGCGC GGATAT GCGTCGGGCCCC GGTCGAGGGCTATCT 90 54 LT409_RS03420 NONE LT409_RS03415 NONE LT409_RS03410 NONE LT409_RS03405 NONE LT409_RS03400 761753 .. 761770 - -3.3 -2.71144 GATTTTTGGGAATTA CAGATGG AGCC CCGTCCG CTTCGCCGCCTCTGT 41 5 LT409_RS03395 NONE LT409_RS03390 759362 .. 759391 - -19.3 -3.59979 TTTGGGTATGCGAAA GCCCCCGTTTCCC GAAC GGGAAGCGGGGGC TGACGGAAAGGAGAT 100 42 LT409_RS03385 758307 .. 758321 - -2.7 -2.73994 AGGTCTTGAACATTA TGGCC TCCCG GGCCG TTGTCTCGTCTGAAA 39 44 LT409_RS03380 NONE LT409_RS03375 755766 .. 755787 - -15.9 -4.54047 CGAGCCGATAGAAAA GCGCTTCCC GGAC GGGAAGCGC TGAAATAGCCGGGCC 100 472 LT409_RS03365 NONE LT409_RS03360 753718 .. 753755 - -19.9 -2.56838 CACATCCAAAGACAG GGAAGGGCGCCCGCG GTACGGTG CGCGGGCGCCCTTCT GGTACGGGTTGTGGA 95 56 LT409_RS03355 NONE LT409_RS03350 751670 .. 751686 - -3 -3.53012 GCGGGGCGGTCGAAA CTCGGAT GGCG ATCCG-G ATTTTGCCGCCTTCT 47 168 LT409_RS03345 NONE LT409_RS03340 NONE LT409_RS03335 747624 .. 747649 - -16.9 -4.20868 CGGCGAAAAGAAGAA CCCCGCTCCCA AAAG TGGGAACGGGG CATCGAAAAGGCAGA 100 308 LT409_RS03330 NONE LT409_RS03325 744509 .. 744539 - -16 -3.0894 GAATTATGGAGCGAA GGGCCCGTCGTCCC TAT GAGGCGGCGGGCCC GGTGCGGCTCCCGTA 83 82 LT409_RS03320 743997 .. 744015 - -13.1 -3.57144 GTGGTTATCTGGAAA GCGCGCC CTGTC GGCGCGC GGGAAGGTTCGGGAT 82 89 LT409_RS03315 NONE LT409_RS03310 NONE LT409_RS03305 NONE LT409_RS03300 NONE cpaB NONE LT409_RS03290 NONE LT409_RS03285 NONE LT409_RS03280 NONE LT409_RS03275 736676 .. 736701 - -11.2 -2.71731 GTCAGTGCGCAAGGA GGTCAACGAG AGTCCG CTCGTCGACC TCCTTGCCCGAATCA 65 193 LT409_RS03265 735598 .. 735634 - -21.7 -3.64703 GCTTCCTTACGCAAA GACAGCACCCATGACGC AGT GCTCCATGGGTGCTGTC TGGGCTGTCATGCAC 100 211 LT409_RS03260 NONE LT409_RS03255 733715 .. 733742 - -14.9 -5.11112 AAAGGCGAAGAAAAA GCCTCCGTCCC AACGCG GGAACGGAGGC TCGATAATCGGGTTT 100 438 LT409_RS03245 732425 .. 732439 - -4.2 -4.24002 TGCTAAACCCCAAAA GCCG AAGCACG CGGC GTCGCCCGTTTCGCT 65 72 LT409_RS03240 NONE LT409_RS03235 731358 .. 731384 - -21.6 -3.72588 GAACGCATACTGAAA GAGCCGCCGCCC GAT GGGCGACGGCTC CAAGGCCTCCCGTAT 100 81 LT409_RS03230 NONE LT409_RS03225 NONE LT409_RS03220 727841 .. 727862 - -7.2 -4.03978 AACCGCGCAGATAAA GACCGGCG AGGGCG CGCCGTTC TTCGCCGTCGGCTGG 67 516 LT409_RS03210 NONE LT409_RS03205 NONE LT409_RS03200 719004 .. 719025 - -8.6 -2.64274 AGCTCCTTAAAGGGA TCCGCCGC GGAAAA GCGGCGGC GATGTGGATATTGCC 52 102 LT409_RS03195 718002 .. 718030 - -16 -5.72207 CCCAAACGAAAAAAA CGCCGCGGCAGG AACCG CCTGCCACGGCA AAGTGAACTCAGCGC 100 34 LT409_RS03190 NONE LT409_RS03185 NONE LT409_RS03180 NONE LT409_RS03175 713941 .. 713973 - -17.6 -3.01765 ATACCCGAAATCATA GGGCCGCCGTCCCG CAATT CGGTCCGGCGGCCC ATGGGGTTCCCGAAC 87 52 LT409_RS03170 712121 .. 712149 - -15.2 -4.27316 GTCTTGAACGCAAAA GGCCCCGGACCC GAAAA GGGCCCCGGGCC AAATATCACGCCGAC 100 54 LT409_RS03165 NONE LT409_RS03160 709543 .. 709568 - -13.3 -3.56325 GTCCGACAACGAGAA CGACCCTTCCC GAAT GGGAAAGGCCG CCATCAATCGACAAT 88 55 LT409_RS03155 708522 .. 708547 - -20.5 -3.54029 GCCCATCAACGAGAA CGGCCCTTCCC GAAC GGGAAGGGCCG CCATCTGACCGCGGC 100 56 LT409_RS03150 NONE LT409_RS03145 NONE LT409_RS03140 NONE LT409_RS03135 705022 .. 705054 - -24.9 -4.41348 GCCGCGGCAAAGAAA TCGGCGGCCGCCGGC ATA GCCGACAGCCGCCGA GACGATCCCGCAAAG 100 71 LT409_RS03130 NONE LT409_RS03125 702762 .. 702776 - -4.9 -3.72893 TAGTCGGCGATGAAA GACGC GGGGT GCGCC TTGCGGCCCGTCCTA 57 77 LT409_RS03110 NONE LT409_RS03105 699632 .. 699656 - -22.9 -3.77264 CAAAAGACGCAAGAA GGCGCCCTCGG AAA CCGAGGGCGCC TTACCGACCGCATCG 100 42 LT409_RS03100 NONE LT409_RS03095 697628 .. 697646 - -3.1 -4.05788 TTGCGGCAAAGGAAA CCGCTAC ATGGA ATAGCGA TCGATAACAACCGTC 59 279 LT409_RS03055 691156 .. 691173 - -12.7 -3.72984 GGACAACGATGGAAA GCGAGCG GAAA CGCTCGC GGCGGACACGGGCGG 85 160 LT409_RS03005 NONE LT409_RS03000 683212 .. 683236 - -6.4 -3.2794 GTCTACGGAGACGAA CCTGGACGGAC CTCT ACCCGTCC-GG CTTCACGGAGAACCA 56 14 LT409_RS02995 682239 .. 682265 - -10.1 -4.07568 CCGGGTTCGGGAAAA GGAC-GGGGCCG AAAA CGGCCCCTGTCT TGAAATCTGGATATG 80 151 LT409_RS02990 NONE LT409_RS02985 681009 .. 681037 - -14.6 -3.01791 AGCTCTTTTCTAATA TGAGCCGGCACC TCCAC GGTACCGGCCCA ATAACGACTGCCTAC 80 37 LT409_RS02955 NONE LT409_RS02950 NONE LT409_RS02945 NONE LT409_RS02940 671291 .. 671319 - -15.3 -3.81339 TAGCGACAACGGAAA TGGGAAGGCCGAA TCT CCCGGCCTCCCCA TTTCATTTTCGCGGG 93 48 LT409_RS02860 657161 .. 657171 - -2.4 -4.1711 AGCATGCCGAAGAAA GGCG TGG CGCT GTAGCCGTCCGCCGC 60 69 LT409_RS02840 654411 .. 654436 - -8.1 -3.76224 TCGTGACCGAGGAAA CGGGGCAGTCG GTGT CGCCCGCCACG GTCAAGCGCGCTATC 65 366 LT409_RS02830 653202 .. 653215 - -5.2 -2.94232 CTTTCTCGAAAGAAT GCGC CTACCC GCGC CAAATGTCGGCAACG 45 16 LT409_RS02825 652633 .. 652645 - -4.7 -4.07568 TTGGTCGTGTGAAAA CCGTC AAA GTCGG ATTAGAGATTGTTCG 64 202 LT409_RS02795 646342 .. 646372 - -21.2 -3.89354 TTCGGAAACGAAGAA GCGCCGCGCATCTT GAA ACGATGCGCGGCGC TTACCTATATATAGG 100 77 LT409_RS02735 633033 .. 633067 - -9.3 -3.14132 CTTGGCTGCTAGCAA GTTGCCATCCTGATC TGGCT GCTCAGGATGACAGC CTGCCGCCTTCGCTC 61 56 LT409_RS02705 NONE LT409_RS02700 624847 .. 624865 - -6.7 -3.63991 GACCAGCTGGAAGAA CTCGACGC CTGG GCG-CGAG CGGAAGCGCGCAGGA 59 48 LT409_RS02665 617816 .. 617846 - -3.2 -3.4252 GTCGACCCAGCAGAA CAGCGCGCAGGAG TCTATG CTCGAGCGC-CTG TTCGGCGGCGGCTCC 47 490 LT409_RS02655 NONE LT409_RS02650 NONE LT409_RS02645 612906 .. 612947 - -17.4 -3.6608 AGGAGCGTACGGAAA TCGCAACCGGCTACGC-CG TGCGT CGCGCATAGCCGGTTGCGT GGGGCGCGTTTAGCG 100 35 LT409_RS02640 NONE panB NONE panC NONE LT409_RS02625 609382 .. 609403 - -7.5 -4.25104 TGCCTCCTAGCAAAA TTTGTTATA TATT TATAACAAA TTTTATATCTAATTT 71 453 LT409_RS02620 NONE LT409_RS02615 608412 .. 608424 - -3.3 -3.65314 GCCAACGCTGAACAA CGGCA TGA TGCCC ACGGTTGCCGCGTTT 51 349 LT409_RS02605 606228 .. 606248 - -4.5 -3.07895 GCTACGCCGAAGAGA TCGCCGCGC TGC GCAGGGCGC ATGAATAGGCGAGCG 46 54 LT409_RS02595 NONE LT409_RS02590 603890 .. 603909 - -4.8 -3.36273 GGTGCGCAAGACCAA CAGCGCCG CCAT CGCCGCGG AGGTGCGCGGCTTCA 51 179 LT409_RS02560 597409 .. 597432 - -18.2 -5.00616 TGCGCTGCGAAAAAA GACGGCAGCC AAGC GGCTGCCGTC TCAGGGGAGCGAAAA 100 53 LT409_RS02555 595160 .. 595195 - -13.3 -4.39002 AAAGGCGCGACAAAA CGAAAGCGCGCTCCC TTGTTG GGAAGCGCGCTTCCT TGACCTGCTGTTTTC 100 189 LT409_RS02540 NONE LT409_RS02535 587750 .. 587774 - -10 -2.71144 GATCTGTTCCAAGGA CAGCCTCCTT TCGAG AAGGCGGCTG TCCTTTACGGGAAAG 61 103 LT409_RS02530 586614 .. 586650 - -23.1 -3.2614 TACTGCGCATAGGAA TGTGCGCCCCGCCGCC TTTCGC GGCGGCGGGGCGC-CA TCTTCGCTCGCAAAA 100 102 hdcA 582874 .. 582916 - -19.9 -3.53224 CAGTCCTTGTCTAAA CGTGATCGAGCCGCCCGGG GGTTG CCTGGACGGCTCGATCAGG GGGATACCGTCGGTT 100 39 LT409_RS02505 581301 .. 581326 - -17.5 -5.2112 AAGACGACCAAAAAA GCCCGGGGCCG AAAG CGGCCTCGGGC TTCGCGGTGATCGCA 100 53 LT409_RS02500 580006 .. 580028 - -5.4 -3.57144 CCCGCTACGCGCAAA CCGCCGAGGC CAA GCCCGAGCAG GCTGCGCGCATGCAT 55 209 dtd 578779 .. 578790 - -7.2 -4.13767 CTTGGCATGCGAAAA GCGG GTTG CCGC TGCGCCGTTTCTTCA 68 262 LT409_RS02480 577357 .. 577368 - -4.4 -3.30039 CATCGACAACGAAGA GCTT CCGA AAGC TTTCCCCTCGCTTGA 47 186 LT409_RS02470 NONE LT409_RS02465 NONE LT409_RS02460 NONE LT409_RS02455 574237 .. 574260 - -15.3 -3.02511 GTCATGCCTCGAAGA CGGCGCGGA GGCGTG TCCGCGCCG CGATCGGTGCGTGGC 79 122 LT409_RS02445 572910 .. 572921 - -2.2 -3.56541 ACGACGACTACAGAA CCTG CATG CAAG GCGTGCACCGCTCTG 49 80 LT409_RS02440 571866 .. 571881 - -6 -3.70773 TTCTAGATGGAAGAA GGCCGC CGAA GCGGCA ACTATGCGTTGCGCG 60 184 LT409_RS02435 570399 .. 570431 - -21.3 -4.09739 CTAACTCGGCGAAAA CGGGGGCTGCTCGAC AGT GTCGGACAGCCCCCG TTTCGATGTCTCGAG 100 54 LT409_RS02415 565206 .. 565253 - -13.4 -2.94912 TCTGCAACTCAGACA GTCCTGCTCGCA-CGAACAGCCC GCT GGGCTGTTCGGCTCGTGCGGAAC TCGTATCAGACCCCT 75 181 LT409_RS02400 561274 .. 561290 - -2.9 -3.36671 ACGGGAAGGGTATAA GCGCCTT TCG AAGATGC TTCAGGCTGGCGGCG 44 45 LT409_RS02395 559769 .. 559788 - -15 -3.4678 ACGCGTATATGAGAA GGCCGGTC GCAA GACCGGCC TTCTTTTGCTATTGG 90 85 LT409_RS02370 NONE LT409_RS02365 554521 .. 554552 - -10.8 -3.53444 TTAGCCGCCCGGAAA TG-CTGCGACCCCCG GAT CGGGGGTCGCTTTCA TGCGTTAGTCCTCTT 70 30 LT409_RS02325 546294 .. 546318 - -22.9 -3.75153 TCGGCTCAATGGAAA CGAGGGCGCCC GAC GGGCGCCCTCG TTTTGTTCGTCTACA 100 36 LT409_RS02220 520955 .. 520965 - -2.4 -2.52516 GGCTTCATGACGAAT GGCG CAC CTCC GCTGTCGGCTGCGCA 37 223 LT409_RS02215 NONE LT409_RS02210 519911 .. 519951 - -8.3 -3.40403 CCGTTTCTACCAGAA CAGGAGCACGTCG-GACG TAGCGC CTTCTCGACGTGCTCGCG GCGATCGCTTCGACG 60 402 LT409_RS02170 510037 .. 510064 - -3.2 -3.68222 TGCCAACCCGAACAA GGCCACCTGCAC TCCG GCGAGAGCGGCC GCGCCTACGAAGGTT 51 249 LT409_RS02160 NONE LT409_RS02155 507809 .. 507823 - -7 -3.21924 GCATCCCCGAGAAGA CGGGCG GCG CGCACG CGAAGAAGACGGCCG 54 394 LT409_RS02120 499165 .. 499204 - -2.6 -4.07568 CCCGCTCCGCGAAAA CTCGCCGGCGGCTCGGAAG CCC CCTTCG-GCCATCGGCCGG ACGCTCGTCTCGCCT 57 160 LT409_RS02115 496641 .. 496657 - -6.5 -3.27704 ATCGCTCAAAGTGAA CGGCG TTGAAGT CGCCG ACGAAGACGTATTCA 56 244 LT409_RS02030 476260 .. 476296 - -10.7 -2.80796 CTCCACCACGGAAAC CTGATCGGGGCGAGGCC AAC GGCTTCGCCCCGATTTT TCAAGGTGCGACCAT 61 59 LT409_RS02005 472771 .. 472788 - -9.9 -3.06796 GCCGACGGCATCGAA GATCTGG CGAA CCAGATC GGCGTGCCGGCCGAT 60 468 LT409_RS01995 469920 .. 469930 - -3.2 -3.04398 GGGCCGCTCGAAAAG CTAC ATT GCAG AAAGCCTGTTCATCA 43 132 LT409_RS01980 467552 .. 467595 - -4.6 -3.03124 GCCGACGGCCGAAGA GGGCTTCCGAGCCG-CCGGCGA GCCC TCGCGGGACGGCCCGG---CCC GGCTATGTCAATATT 46 121 LT409_RS01950 NONE LT409_RS01945 460448 .. 460462 - -4.2 -4.37092 AGTTTCGTTACAAAA CCGC GTTGGGT GCGG GCGTTTTGGTGACGG 69 392 LT409_RS01925 457121 .. 457133 - -4.8 -3.29511 CCGAGTGGGCGATAA CCGT GTTGT ACGG CGTGCGCACGGTGGG 49 348 LT409_RS01900 NONE LT409_RS01895 NONE LT409_RS01890 NONE LT409_RS01885 NONE LT409_RS01880 NONE LT409_RS01875 NONE LT409_RS01870 443790 .. 443815 - -8.3 -2.8499 AGCGAAGACGAACTA CGGCGAG-GATG GTA CATTGCTCGCCG CCAACTCCGACGAGG 55 144 LT409_RS01830 432415 .. 432430 - -6.2 -4.258 CCATGCATGAACAAA TGTTTC ACGT GAAACA CGGAGAGGGCGGCGC 68 40 LT409_RS01825 430857 .. 430874 - -14.1 -3.71873 GGAGCGATAGTCAAA GCGGCCC CGCA GGGCCGC TTTCGGAAACGCGCT 91 55 LT409_RS01810 NONE LT409_RS01805 429399 .. 429411 - -3.3 -3.57561 CTGCAATGCTTCAAA CAGGC GAA GCTTG CCTTGCTGCCCTTCG 51 69 LT409_RS01745 414447 .. 414458 - -3.6 -2.78798 ACGCCTCATTCAAAC GGCG AGGG CACC TTCTGCTTGCTGAGA 41 4 LT409_RS01730 NONE LT409_RS01725 409015 .. 409045 - -2.6 -3.95986 TGTAACCGAAGGAAA GCGTGTCGAA GGGACGGGGGG TTTGACACGC TTTTTCCCGTTTTGC 54 110 LT409_RS01710 405455 .. 405474 - -2.8 -3.78934 TTCGGGCGAGAAGAA GC-TGCCGC GCG ACGACATGC GCTTCACGCCGTGCC 54 425 LT409_RS01690 397581 .. 397591 - -6.8 -3.83568 CGACATCCACAAGAA GCAG GAG CTGC TGGTCCTGATCGACC 63 217 LT409_RS01680 NONE LT409_RS01675 394853 .. 394889 - -16.6 -3.60006 AAGGAGATCCGGAAA TGCAGCAAGGCCGCGT GCAGG ACGCGGCCTTGCTGGT GCGAGCGTTGCTCGC 100 58 LT409_RS01670 NONE LT409_RS01665 392230 .. 392269 - -7.2 -3.9377 AGAACGGGAAGGAAA GAGAGCTCCGCGCAG GGGAGGGGTGG CTGCGCGGCGCT-TC TTCCTAGGGAAGGGT 65 29 LT409_RS01660 NONE LT409_RS01655 390486 .. 390498 - -4.7 -3.61001 GGTTATAAAAAGATA CTGCG GCG CGCGG GTTCCAACGCGGCGT 54 41 LT409_RS01645 NONE LT409_RS01640 385704 .. 385718 - -8.6 -2.78384 GCTTTCTCGATGACA GAATCG CGT CGATTC CTGCCGGAATTTCCC 53 172 LT409_RS01625 381854 .. 381912 - -30.8 -3.66178 GGGGGTAACTCGAAA CCGTTGTCGCCCGAAACGTGCGCTTTT GAGCGA AAAAACGCACGTTTCGGGCGACAACG- GCAATCGGGAGCAGG 100 101 LT409_RS01610 378927 .. 378945 - -12.4 -2.71364 GCATGGCGGGAACGA GCGTCGCC ATG GGCAACGC TCGGTCGGCCATCAA 65 247 LT409_RS01600 376756 .. 376771 - -3.2 -3.5511 TGCTAGGCACAAAGA GTACAC GCTG GTGTCC AAAAGGTACTTTCCT 49 39 LT409_RS01595 374682 .. 374716 - -14.3 -2.85364 ATATCAGCAAAAGAT CGCCCTGACCGCAGA AGGAA TATACGGCCAGGGCG TAAGGAAGGTGCGTC 79 55 LT409_RS01585 372404 .. 372427 - -10.3 -3.54919 AAGCATCGCCCGAAA GCTC-CCGCC TCTCC GGCGGCGAGC AGCGTACCCTGCGCA 69 238 LT409_RS01575 368264 .. 368289 - -5.5 -3.61398 GCGCGTGTTCAAGAA CATGCAGAC-AT CCG ATCGGCTGCATG TGGACGACGACCGTT 57 314 LT409_RS01550 363019 .. 363038 - -2.7 -3.92324 CGTTCGAAGAGCAAA GCGCGAG CTCGAC CCCGCCC TCACTTCTTCTTGGT 54 275 LT409_RS01530 358395 .. 358407 - -4.8 -4.09685 TCTCAGGTGCGAAAA CCGT GTTTT ACGG GCGATGATGCGTTGT 61 168 LT409_RS01515 NONE LT409_RS01510 352659 .. 352693 - -14.3 -2.94759 GAAGCCGAAGAAGGA CGCGGCCGACGACTT CGTTC AAGCCACCGACCGCG GCGCGCAGGCAGCGT 75 122 raiA NONE LT409_RS01480 346276 .. 346305 - -25.1 -3.61398 CCCCCCCCTGAACAA GCGAAGGCCCGCC GATC GGCGGGCCTTCGC GGTGCTGCTTGCAGG 100 48 LT409_RS01470 342747 .. 342781 - -7.7 -2.59564 GTGGCACCCGACAAT CCGCGCGCGCTGCCCG CCAG CAAGCTG-GCGCGCGC CATCCGTTGGACCGG 50 207 LT409_RS01450 337463 .. 337498 - -16.2 -2.87132 CCCTTGCCTCATACA GCCCCGTTAACGAAAG GTTT CTTTCGATAGCGGGGC CTTTTCGCAGCGTAA 81 352 LT409_RS01430 NONE LT409_RS01425 330436 .. 330467 - -16.7 -3.01712 GCCTTCGTTCGAAGA TGCGAAGGGGCGCC CCTGC GGCGCCCCTTCG-A GTAGCGGATGGCGGT 87 40 LT409_RS01420 NONE LT409_RS01415 328338 .. 328350 - -6.9 -3.26947 CAACCGCGAGATCAA GCGCA GGA CGCGC GTCGTGCAGGGGTTC 54 499 LT409_RS01395 324238 .. 324257 - -15 -3.60151 TTCGCGAAACGAGAA GGGCTGCC TTTG GGCAGCCC TTCTTCATGAGCGGG 90 54 LT409_RS01305 309023 .. 309039 - -2.9 -2.62616 TCAGCTGGTAGAGCA GGGGACT TTT AATCCCA AGGTCGCGGGTTCGA 39 231 LT409_RS01290 308306 .. 308318 - -3.4 -2.95073 TTCCGAATACGAAAT CTCT CGTCC AGAG CTTTTCTCGTGCAAT 42 51 LT409_RS01285 306960 .. 306991 - -26 -3.85165 GATTCCAAATGCAAA CGGAGGCTCCGTCG TGTG CGACGGAGCCTCCG TGGTTTGAAGGGGCT 100 111 LT409_RS01230 291849 .. 291887 - -24.6 -3.49951 TAGATCGGTAGAGAA TGCGCCGGAAGGCTCCCG GAG CGGGAGCCTTCCGGCGTT GAGGGAGGGGGCAGG 100 46 LT409_RS01175 NONE LT409_RS01170 NONE LT409_RS01165 278267 .. 278277 - -2.4 -4.07618 GGTCGAAGAAGGAAA CCGC AGT GCGC CTTATCGACATCGAT 58 506 LT409_RS01150 275674 .. 275687 - -6.7 -3.61715 CACGCTTCGCAAGAA GATCG AGCC CGATC CTGCGAACCCTCGCT 59 168 LT409_RS01085 255249 .. 255278 - -14.3 -2.61199 CAACCTGCAAGCAAC TCGCGGGCGTTTC ATGC GAAACGCCCGCAT TCGCGTCGGAGAAAC 76 62 LT409_RS01035 244488 .. 244512 - -15.8 -4.81685 AGCAAGCAGCAAAAA CGCCTTCGAC GGAGT GTCGAAGGCG AGGAAGCAAATCAGA 100 108 LT409_RS01030 243521 .. 243548 - -17.1 -3.72576 GCGCTCGCTATCAAA TCCGGGATCGC GATCGG GCGATCCCGGA TTTGCGTGTTTGAGG 100 44 LT409_RS01020 NONE LT409_RS01015 NONE LT409_RS01010 241182 .. 241198 - -4.3 -3.63276 CCAGAACAAGCAGAA CCTAGGC AAG GCGCAGG AGTACGCGGCGCGCA 53 394 LT409_RS00985 235557 .. 235593 - -23.8 -4.07687 AGGTCGTTCGCAAAA CCGTCCTGAGGGGGGG CGACC CCCCCCCTCAGGACGC TCAGCGGTAGATCAT 100 26 LT409_RS00945 224163 .. 224192 - -17.3 -4.6902 TCACAATTGGAAAAA CGTCCTGGAATGGG ATT CCC-TTCCAGGACG TTCTCGCATGCCCGA 100 61 LT409_RS00930 219930 .. 219940 - -3.2 -3.27525 GTGTGCGAAACCCAA GCGA CCT TCAC AAAGGGCGGGCGATG 47 274 LT409_RS00925 218604 .. 218661 - -44.7 -3.74747 CCAAGCGGTAGGAAA CATCGATCACCAAACGAAACGGGCGCC TTCG GGCGCCCGTTTCGTTTGGTGATCGATG GCAGAGGGACGTGGT 100 77 LT409_RS00910 215177 .. 215191 - -7.1 -3.18264 GGCGGTAGCTACGAA GCGCT TGCCG AGCGC ACTGCTGACCTGGGT 54 247 LT409_RS00870 NONE LT409_RS00865 205126 .. 205142 - -8.7 -3.21099 CGGCCGCACGATGAA CCTCATC GCC GACGAGG ACGATATGCTGGAGG 59 379 LT409_RS00840 198396 .. 198426 - -18.3 -3.27525 GCGTCGGAAATGCAA CGGCGCGCCG-GGC AAGT GCCGCAGCGCGCCG TATGCGGCGATGTAA 95 221 LT409_RS00835 196761 .. 196812 - -11.3 -3.4052 CCGTAACCCAACGAA CGGCGCCGACCCGCGCGTATGCGC CGCCT GCGCGAGCGAGCAGG-CGGCGCAG TGGGAGCTACAGCAC 72 32 LT409_RS00830 196245 .. 196272 - -14.8 -4.56702 CTCGAACCAAAGAAA GCGGCACTGCCG AAAC CGACGGTGCCGC TTGCAGGTGGTTGCG 100 50 LT409_RS00825 NONE LT409_RS00820 194455 .. 194468 - -4.5 -5.00884 ATTGCGGTCAAAAAA CCCAG CAAG CTGGA AGCGAACTCAAGGAT 81 425 LT409_RS00800 188593 .. 188618 - -6.9 -3.21747 CTACCGCACCATGAA GTTCCTCGACTG GTT CA-TCGAGGAGC AGCAGGAGGAAGAGG 54 224 LT409_RS00760 178845 .. 178872 - -21.4 -4.07568 GTTCCTGCCGGAAAA GAGAACGCCCCG GATT CGGGGCGTTCTC GTAGGGGGCGAGAGC 100 74 LT409_RS00745 NONE LT409_RS00740 NONE LT409_RS00735 172750 .. 172779 - -22.9 -3.43049 CAAGAACGCAACGAA GCCCCGGCTCGCC GTAA AGCGAGCCGGGGC TTTTATCGTGTTACA 100 36 LT409_RS00720 168560 .. 168575 - -6 -3.63968 CGGGAAACTGCGAAA CCCCCC TTGA GGTGGG GTGCTCGACCTGGGG 57 86 LT409_RS00715 166838 .. 166875 - -23.5 -3.85698 CTTTCGGGCGACAAA CGATGCGGCGTGCGAGC GGGG GCCGGCACGCCGCATCG CGCAGATGCTAGGCG 100 34 LT409_RS00685 NONE LT409_RS00680 161794 .. 161807 - -3.1 -2.70932 CTCTTTTGGCAACTA CG-GCA ACA TGCTCG GAAACCTGTGCAGGG 41 60 LT409_RS00675 NONE LT409_RS00670 157244 .. 157256 - -4.7 -3.35679 CTCGGGCAGCCAGAA GGCGC TGC GCGTC ATCTCCATCGTGCTG 51 507 LT409_RS00620 147967 .. 147985 - -2.5 -4.36914 CCCGCTGTTATAAAA CACT-TGA ATGT TCACAGTG CAAACTCCTATCTGC 63 33 LT409_RS00615 NONE LT409_RS00610 NONE LT409_RS00605 NONE LT409_RS00600 NONE LT409_RS00595 144148 .. 144178 - -4.6 -3.89572 ACCTAATGACAACAA TTGCAGTAGGACGT AAA ACATCCAACAGCAT AAGGGTTTCTTTTGC 59 52 LT409_RS00585 142772 .. 142803 - -11.5 -3.96298 GATTCATCAACTAAA TGCAGCGGCTGGG TTCATC CCCAGCCGCTGTT GTCATAAAAAGCTAA 82 68 LT409_RS00510 126261 .. 126271 - -2.4 -3.41051 TGATGCCTACGATAA CGCC TTA GCCG AGACAATCAACGGAC 44 226 LT409_RS00465 117271 .. 117286 - -6.8 -4.1711 ACCAGGGCCAAGAAA TCGCCG TGTT CGACGA GCGGTTCGACGTGGT 71 80 LT409_RS00435 112877 .. 112927 - -8.19999 -2.71712 CGTCCTCGTCGAAAC CCGGTTCTGCCATGCGGGCCCGCGC AATC GCGCGGGCCCGC-TGTC-GTTC-GA CATGGAGTGCGCTCG 53 69 LT409_RS00425 109636 .. 109654 - -3.8 -4.28762 AGAAGCGCACGAAAA TCGCCG TGGTCAT CGACGA GCATGGCGGCACGGC 66 449 mscL 91881 .. 91897 - -2.1 -3.57263 ATCGCCATGGCGAAA GCGGCTA TCC TGGCGGC ATCGCTGATCGCCGG 50 111 LT409_RS00350 86800 .. 86823 - -12.6 -3.20164 GGACATCGAAGCGAA CGAATGTTTC ACGT GAAACATTCG GGTCCTTCGCTGTTT 74 41 LT409_RS00345 84786 .. 84810 - -3.6 -4.07568 TGGGCGGCGTGAAAA CCGA-CGCATCG TGC CAA-GCGCTCGG CGAAAACGGCAGCGT 60 424 LT409_RS00280 66661 .. 66711 - -25.6 -4.8048 TCGCCATACGAAAAA GCCCCGGTCTCCTCAAGCGGTT TGCGATG AACTGCGTGAGGAGACCGGGGC GAGGCGTGGGCCGAG 100 46 LT409_RS00275 65816 .. 65829 - -8.1 -2.53715 CCGACCACGATCAAC CGTCC ATGG GGACG TGGGACGATATTCTA 52 177 LT409_RS00270 65698 .. 65717 - -12.8 -5.00616 CGGGCGCGCAAAAAA GCGCCCCC GAAA GGGAGCGC TTCTGCATTCGAATG 100 39 LT409_RS00260 61551 .. 61570 - -7 -3.32769 CTTGGAAACCACGAA CGGCGCCG CAAC CACCGCCG GCCTCGTTGAAAAAG 56 90 LT409_RS00155 36861 .. 36881 - -4 -3.60098 ATGTTTCACGTGAAA CATCCC GGGCGCTTT GGGATG CGGGGGGGGGGTCGG 51 143 LT409_RS00090 20024 .. 20046 - -20.6 -4.02719 CCAGTAAACAGCAAA CCCTCCCGGC TCC GCCGGGAGGG TTTTTTCTTAAGCGT 100 146 LT409_RS00045 NONE LT409_RS00040 11905 .. 11915 - -2.4 -3.90744 GGCCGTCCGAAAGAA CCGG GCG CCGT CAGCCTGTCGGCGAT 55 157