LT478_RS00015 NONE LT478_RS00020 4940 .. 4955 + -3.2 -3.4456 TATGGCTTCTAAAAC CCTTCA TACT TGATGG ATTTTGTTGGTATCC 49 86 gyrB 7205 .. 7218 + -9.5 -3.25823 GCGGCGAGGACGAGT CGCGC CCCG GCGCG TTCGTGTCCGAGGAG 61 233 gyrA 9894 .. 9924 + -21.2 -4.35483 CAGCGTAACCTTGAA TGCCCCGCCTCGCA TCC TGCGAAGCGGGGCA TTTCTTGTCGTGAGA 100 52 LT478_RS00035 12262 .. 12278 + -5 -4.14243 GGTCGTGCGTCATCG GCCGCG AGAAC CGCGCC TTTTCCAGTGCGATG 64 386 LT478_RS00045 12755 .. 12796 + -13.9 -3.6053 CACCATTTTTTGCAA TAAACGCTCCACCG-TGAGC CGA GTTAGCCGGTGGAGCGTTTA TTAATTTCTAGACGC 88 36 LT478_RS00050 12942 .. 12969 + -17 -3.48036 CATACGTTATTCATC CGAACCCCCGCC GAGA GGCAGGGGTTCG TTGCTTCTGGTCGTG 100 39 LT478_RS00055 13938 .. 13950 + -9.1 -3.28712 TCGTCCCGATCGCCC GGCAG CGC CTGCC TTGTCGCCCGAAACG 63 74 typA 15932 .. 15951 + -13.6 -3.61398 ATCACTATGTAAGAA TGCGCCCT GATC AGGGCGCA TTCTTACAAGAGGGA 88 44 LT478_RS00065 17446 .. 17482 + -18.8 -3.89822 TGGTTCATCTGAGTT CGACACGGCGGGCGTCC TTCG GGAC-CCCGCCGTTTCG TTTCTGGCGTGGCTG 100 54 LT478_RS00070 NONE LT478_RS00075 18786 .. 18802 + -10.8 -3.73968 CCGCCAGATTACTCC CGCGCC CCCGA GGCGCG TTTCATACGGGGTTT 76 35 LT478_RS00080 18939 .. 18961 + -20.6 -6.09888 CCAGTAAACAGCAAA CCCTCCCGGC TCC GCCGGGAGGG TTTTTTTTCTTAAGC 100 38 LT478_RS00090 NONE LT478_RS00095 NONE LT478_RS00100 26005 .. 26017 + -4.9 -4.70266 ACCTCGAAAGATAAT TATTC AAT GAATA TTTTTGGATAATCTT 73 75 LT478_RS00105 26826 .. 26841 + -6.2 -3.96148 TTCCGTTCCGTCCGA TGTTTC ACGT GAAACA TTTGTGCTGGCGAGC 62 281 LT478_RS00110 28154 .. 28187 + -22.5 -4.07568 TGCGGCGAAAGCGCC GCCCGCTGCAGCTGC GCGT GCAGCTGCAGCGGGG TTTTCCACAACCCGC 100 332 rpsF NONE ssb NONE rpsR NONE rplI 30344 .. 30383 + -19.4 -3.51232 GGTCGCAGCCGTAGC GAGACCCCCTTCGCCC TTTACGGC GCGCGAAGGGGGTCTC TTCGTTTCGCAAGGA 100 84 dnaB NONE LT478_RS00140 NONE LT478_RS00145 35778 .. 35799 + -8.7 -3.53733 TGAAACATCCCGGAT GCC-GCGGGA TGC TCTCGCAGGC TCTTTCTGCGATGGG 66 208 LT478_RS00150 37518 .. 37530 + -9.1 -2.60075 TCGCGTACCGAAGTA TCCCC TAC GGGGA CTTCCTTCGGGGCGC 56 123 purD NONE LT478_RS00160 40404 .. 40426 + -9.8 -4.84527 GCTCGAACACCGAAA CGCCTGCG CATCTGC CGCGGGCG TTTTTCGTGTGTGCC 100 57 LT478_RS00165 NONE LT478_RS00170 NONE LT478_RS00175 45727 .. 45747 + -3.1 -3.28791 TGCATACTACGAGGA GGGTCGGTA GCA TGACGCCCC TTCTCGACAAAGCGT 47 16 LT478_RS00180 NONE tadA NONE LT478_RS00190 NONE LT478_RS00195 50305 .. 50342 + -7.8 -3.85817 ATTGTATGCTGCAAT GTAACCGTTCTGACAC CGTTTC GTGTCACAGCCGTTAC TTTATGCAGAAAAAT 69 22 LT478_RS00200 NONE LT478_RS00205 NONE pilM NONE LT478_RS00215 NONE LT478_RS00220 54409 .. 54425 + -9.3 -3.53444 TGTCCACCACCAGCA CGGCTCC GGC GGTGCCG TTTGACAGCAGCTCC 65 468 LT478_RS00245 NONE purE 59304 .. 59339 + -19.8 -3.90291 CTCGAACGGTTGCAA C-GTGCGGCCGGATGCG ACC TGCATCCGGCCGCGCTG TTTCGTTAGAACGCT 100 52 LT478_RS00255 NONE LT478_RS00260 62234 .. 62269 + -21.2 -2.60941 TGGCGGTGCGTCCTT CGCGCCCCTCGCG-GAT GCG ACCGCGCGAGGGGCGCG CTTGTGCGCTATCAT 100 54 LT478_RS00265 64614 .. 64632 + -3 -3.55444 GGTCGGAAGGAGGCT GCCATGCG TAA CGTGTTGC TTTCGGGCGTGGGCG 47 15 LT478_RS00270 65236 .. 65254 + -11.6 -3.33696 GCCCCGCGCCCCGCG CCCCGCGC CCC GCGCGCGG TTAGTTGGGGAAGGC 72 48 LT478_RS00275 66462 .. 66514 + -33.2 -2.70932 GCCGATGTCGGAGCA TCATCGCCCCAAAAACACGCTTCA CGCGT TGAGGCGTGTTTTTGGGGCGATGA TGCTTCCCGGCGAAC 100 128 LT478_RS00280 68074 .. 68132 + -13.1 -2.7641 GCATGCGCCCCCGCC CCGCCTCCCATCGCGGTCCGGATGTTTC ACGT GAAACATCCGTTCGGCGGCGG-AGGGGG ATTTGCGAACTTTTT 69 142 LT478_RS00285 70320 .. 70372 + -31.7 -3.12351 GGGACGGCAGAGGGT GCTTCGCTCCAAGAACACGCTTC AGCGAAC GAGGCGTGTTCTTGGAGCGAAGC TTGCATCTCGGAAGC 100 84 LT478_RS00290 72153 .. 72199 + -11.5 -3.18264 CTCGCGGTCGCGCTC GCACCCGCGCCCGACACGCACG GCTC CTTGCGT-TCGTGCTCGCGTGC TTCGTCGATCGAAAA 69 117 LT478_RS00295 74085 .. 74115 + -21.1 -5.40072 AGCGAAGCGCAGCGA GCGCCCGGGACGG CCACC CCGCCCCGGGCGC TTTTTTTGCGCCCGA 100 64 LT478_RS00300 75932 .. 75962 + -16.9 -3.27525 CCGATCTTCCCTCGC GCGCAGGCCGG ACCCCCTCC CCGGCCTGCGC TTGCGTTTGCCCGCC 93 45 LT478_RS00315 79548 .. 79570 + -9.9 -4.07568 CCGTCAAGTAGCGTC GA-CGCAGCC CGGC GGCTGCGCTC TTTTCGCCGCGCCGC 80 30 LT478_RS00335 83532 .. 83544 + -4.7 -2.78384 GAGCGTGCAGGAGTA GCGCG CCT CCCGC TATACTGCGGGAAAG 43 25 LT478_RS00340 84022 .. 84052 + -21.9 -3.96327 GGCGTAAACATCAAA GGGCGGGGACGGC CGAGC GCCGTTCCCGCCC TTTCTCGTGCGGACT 100 34 LT478_RS00360 88355 .. 88369 + -4.2 -5.93252 AGCTCGCGAAAACTG CCGG CTCTTTC CCGG TTTTTTCTTTTTCCG 100 315 LT478_RS00370 89657 .. 89691 + -4 -4.07885 GCCACCTTGAGCTGA GTGCGGGGGTACGGCG GTG CAGCGAACCCCGGTGC TTTTGGCGAAAAGTG 59 100 LT478_RS00385 94175 .. 94206 + -12.2 -4.85782 CACTCTAATGAACAA CGTGCTCCTTTCCC TAGC GGGTGGGGAGCGCG TTTCTTTTTGCGAAA 100 160 LT478_RS00400 NONE LT478_RS00405 NONE ispE 99241 .. 99252 + -5.8 -2.52676 CGAACCGCTGAAATT TCGG CAGC CCGA TGCATTCGCGAAATC 45 30 LT478_RS00415 99919 .. 99964 + -6.2 -4.19704 GGTGCAGTTCTAGCC AAGTT--CAACGAGCGTCGCGT CTCT GCGCGGCGCTCGTCGAAAACTA TTTTGCGTAGGGTTC 68 28 LT478_RS00420 102155 .. 102173 + -3.1 -3.09505 CGTGCATCCCGACCT GGGAAAG GAGCA CTTTCCG TGTTCGCTCGACTGT 43 116 LT478_RS00425 102544 .. 102557 + -8.1 -3.60627 GAAGAAATAGGAAAA CCCTC TTAC GAGGG TTTGAAATGCGGTGG 64 31 LT478_RS00435 104745 .. 104767 + -14.1 -5.252 CCAGGCAGGAACGAA CGCGGCCCC GGCAA GGGGTCGCG TTTTTTGTGCGCGTA 100 42 LT478_RS00440 NONE LT478_RS00445 106442 .. 106482 + -24.1 -2.52516 GTCTCGTCCAAGCAA GAAAACGCCCCGCAGCTCG TTA CAAGCTGCGGGGCGTTGTC GTTGCTGGTCGAAGC 100 140 LT478_RS00485 NONE LT478_RS00490 119744 .. 119765 + -18.7 -3.84246 AAGCAGCGTAAAGAA GCGGCCCCG GTGA CGGGGCCGC TTTCGTCGTTGCAGC 100 30 LT478_RS00505 124123 .. 124160 + -26.5 -2.9155 CGGTTGCGCATACAA GAACGGCTCCTCGGCGA GGGT TTGCCGAGGAGCCGTTC TCTGCTGTTGCGCGC 100 50 LT478_RS00530 NONE LT478_RS00535 NONE LT478_RS00540 NONE LT478_RS00545 135646 .. 135668 + -6.3 -3.92324 GGCGGGAAACAGCGA CCAGGCATT ACGTA AATGCATGG TTTGCTATTCGCCAA 62 90 LT478_RS00550 NONE LT478_RS00555 137496 .. 137509 + -3.8 -3.76373 CCGTCAGATAGCGCA CGAG TCCGAT CTCG TTTCCGTCTTGGCAA 54 30 rlmH 138315 .. 138332 + -2.6 -4.42788 GATCAGCGGGGTCAT CGCCTG GGTTTG CAGGAG TTTTGTCAAGTTGCG 65 288 LT478_RS00570 142712 .. 142725 + -4.5 -3.13164 CTTCACCTGGGGATA TGCAG GATG CTGCG TTCGGTCCTTGGAAA 48 171 folE 143711 .. 143726 + -6.2 -3.34895 AAGGGCCATCGCGAT TGTTTC ACGT GAAACA TTCGTTCGCAATCAG 52 53 LT478_RS00580 144233 .. 144266 + -16.3 -4.26076 CTTCGACGCTACGGA TGTCCTAAAAGGGAA CAGA TTCCTTTTTAGGACA TTTTCGTGGAGGTCA 100 215 LT478_RS00590 147596 .. 147627 + -18.8 -5.0538 TCATCCCCTCCCTGA TGCGGGTGCAGCGC AAGA GTGTTGCACCCGCA TTTTTTCGCGTGCGC 100 54 LT478_RS00600 151300 .. 151321 + -5.9 -3.22448 TCCCGCAGCGCAGAG GAATGCTTC ACGT GAAACATTC TTGCATTGGATTTCC 50 105 LT478_RS00605 152848 .. 152870 + -5.4 -4.07568 TCTTCGCTCCAAAAA CACGCCTCAG CGC CGGGAGCGTG TTTTCCGAGCGAAGA 65 103 LT478_RS00610 154640 .. 154677 + -7.1 -4.86731 AAGCTATTCCGTTGA C-GGTCGCTTCTGC TCATCCCTCTT GCAGAAGCGGCCCG TTTTGTTTCGAGCGA 85 89 LT478_RS00615 155034 .. 155048 + -3.4 -3.12668 GCGTTCCCGACAATT CGGCCG CTT CGATCG TGTTACCCTTTGACG 45 42 LT478_RS00620 156602 .. 156616 + -11.4 -3.61398 CGCCGCCACTCAGCG GCGCAC TGC GTGCGC TTCTTGCGAGCCGGC 77 198 LT478_RS00645 166274 .. 166316 + -25.1 -3.64822 CCGATGAAGGGTTTT CGTCCAAGCGACCCCATGCA TGCG TGCGTGGGGTCGCTTGG-CG TTTCGGTCAACAGAT 100 91 LT478_RS00650 NONE LT478_RS00655 169001 .. 169015 + -5.6 -3.68827 GCTTGCTCCTATCTT TCGGCT TTT GGCCGG TTTCGGTGATCCATG 57 90 LT478_RS00660 169816 .. 169836 + -10.3 -5.26119 ATAACGAACCTCGAA GGGCCGGAG AAT CGTCGGCCC TTTTCTTTTTGGCAC 100 52 LT478_RS00670 173136 .. 173161 + -17.6 -2.52464 GATAGCGTTACACCC CGAGGGCGGC CGTCGA GCCGCCCTCG TAGATTGAAGGCCAC 83 59 LT478_RS00675 NONE LT478_RS00680 NONE hypD 177409 .. 177443 + -23 -3.10901 AACAGGCGCTGCAGC ATCCGAAGGACCCCTC GTC GAGGGGTCCTTCGGAC TATCTTCGAATGTTT 100 47 LT478_RS00690 179140 .. 179172 + -14.1 -4.70319 CTTCGTAAAAAGAAA GGGGATTCGGTTTGC AAG GCATTCCGGATCCCC TTTTCCTTTTCATAA 100 81 LT478_RS00695 180484 .. 180512 + -20.3 -3.59979 TGCAGTAGGTTTGGC GGCGTGCGCCTGG TTC TCGGGCGCACGCC TTTCCGCTGAGAAGC 100 33 LT478_RS00700 181214 .. 181250 + -11.7 -4.07568 TTCACGAGGCATTTT AG-GTGGAGCCCGTTT GCTGCA AAACGGGCTCCACGCC TTTTCGGGGCAGGGC 84 116 LT478_RS00705 182784 .. 182813 + -19.3 -3.09516 GCTGATACAAACGGG CGCCGTCCAGACC TGCT GGTCCGGACGGCG TTCGCTCATGAGACG 90 67 LT478_RS00710 183501 .. 183534 + -26.1 -4.08557 CAGCAACTCACGTTT CGGCGACGGGAGGGT GAAC GCCCTCCCGTCGCCG TTCTTCTTTCCAGCC 100 65 LT478_RS00715 NONE LT478_RS00720 187756 .. 187801 + -16.1 -3.53012 GCAGCACGCGATGCC GGCGGGCGCGTTGGCTGCG-CG GAT TGTCGCGGTCGACGGGCTCGCC TTTCGAGAAGGCCAC 90 429 LT478_RS00730 189258 .. 189289 + -16.7 -3.04144 GCCTGGGGAAAGGAG GCGGTTGCGCG-GA GCGAA TCGCGCGCAACCGC TGTTGGCGATGGAAA 87 87 LT478_RS00740 191882 .. 191913 + -21.7 -3.29829 CACACTGCAGACACA GAAGCGCCCTCCC GGGAAG GGGAGGGCGCTTC TTCTCGAGGCGTCTG 100 83 LT478_RS00750 195597 .. 195613 + -10.8 -3.64685 AGCGCGATCTGAATG CGGCCC TTGGC GGGCCG TTCTTGCCGCGTTTT 73 118 LT478_RS00755 NONE LT478_RS00760 199586 .. 199619 + -21.7 -4.09243 CTTCTATCGAGTGCG TTCGCGTGCCCGCCG GTTT CGGCGGGCACGCGTG TTTTCGAGGGATGTG 100 56 LT478_RS00765 200954 .. 200984 + -9.7 -2.92246 TGAAGGGAGGCCGTC GCGC-ATGCG-GCGG CCT CCGCGCGCTTGGCGC TATCCTTGGCGTTCC 59 70 LT478_RS00770 201887 .. 201903 + -7.9 -3.62046 TGACGGACAGCACGG CGCCTTC GCG GATGGCG TTCTTGACGCGCTCG 63 503 LT478_RS00810 209317 .. 209346 + -14.3 -3.61609 GCGAGAAGAAGCGAA TCGCTCGATCGGT TGGA GCCGGTCGGGCGA TTCTCGTTTCAGTCC 90 84 LT478_RS00820 213327 .. 213362 + -17.7 -3.01924 CCTGTACCGTACCGC CCAAGGCCGCTCG CCTCCCTCCC CGAGCGGCCTTGG TCTTGCGCGGCGCTA 89 133 LT478_RS00830 217732 .. 217743 + -5.8 -3.53811 GCGGCTTCGACGCGC TGCC GGGC GGCA TTTCCCGCGCGTGCC 55 49 LT478_RS00840 219750 .. 219780 + -16.9 -5.79595 GCTTGCCGTGAAGGG CCGGCGACG-CGGC TTCG GCCGTCGTTGCCGG TTTTTTGTTTTGCCG 100 43 LT478_RS00845 221365 .. 221401 + -14.4 -4.4078 GCATTCGTTGATTGA AG-GGACGGCCGCGGCG TATT TGCCGCGGCCGTTCGCG TTTTCGTTCCCCGCA 100 45 LT478_RS00850 222502 .. 222518 + -3.7 -4.18197 TGTCGTACAATTGAA GTTACTT TTG AAGTTAC TTTTCCCTAACGGCT 62 111 LT478_RS00855 226989 .. 227030 + -13.8 -3.53012 GAGATTCGCTAGAAT CGA-AGATGCCGCGGCGCGC TTCA GCGCGCC-CGGCGTGTCTCG TTTCCCCGAAAGGCG 86 123 LT478_RS00860 229195 .. 229237 + -13.3 -3.23393 TGCGGCGGCCGCTGC CGCGTGC-GGCATCCGGCGG CGCG TCGCCGGTCGCCTGTGCGCG TGTTCTGCAATCGGG 78 232 htpG 231425 .. 231457 + -19.2 -4.34402 ATGGCGTAAGTTAGC TGAGGGGCGCTCGT GTTTG GCGAGCGCCCCTCG TTTTGCTGTGCGGGG 100 144 LT478_RS00895 240424 .. 240443 + -10 -3.63515 CGAACACGGTGCAGC GCGCCGCGA TGT TCGCGG-GC TTCTTCGAGGTCAGC 71 510 LT478_RS00915 245185 .. 245209 + -4.3 -5.00616 ATCAGACCCACCGGG TCTTGCAGG ATGCGCG CTTGCGAGA TTTTTTCAGCGGGCA 82 205 LT478_RS00925 247109 .. 247159 + -19.7 -3.55444 GTGATTCGCGGGCGT TTCGTGCGGGTGCGGCGGAGCTT GGACA GGGATCCGCCGCATCCGCACGGC TTTGACGCGTGCGCC 100 118 LT478_RS00945 254474 .. 254495 + -5.8 -3.54424 GGAATATTGGAGGTC GGTTCGCG TCGGTT CGCGAAGC TTTCGCACCGTCCAA 55 366 LT478_RS00950 255564 .. 255615 + -6.9 -2.71712 TCCCGCCGGGGCGAA CCCGCGCAGCTGCCGCCGGGGCG AATTCG CGCCGCAGCTGCCGTGCCGTGGG GTTTACGCGCGCAGC 50 230 hcp 259637 .. 259679 + -15.9 -3.53091 TGAGAATCCGGCGGG TATTCCGAAGTTTTCTCAA TTGGT TTGAGAAAACTTCGGAACG TTTCAAAGCGGAGCT 93 95 mazG 262821 .. 262834 + -8.1 -3.14211 GCAGCGGATTCAACG TGCGC GTGC GCGCA TTGATCGACGCCCAT 57 308 LT478_RS00990 NONE LT478_RS00995 266870 .. 266882 + -2.6 -4.1466 CGCATCTGCGTCCAC GGCC GCTAG GGTC TTTTGCGACTTCCGT 60 17 LT478_RS01000 267926 .. 267953 + -12.7 -4.3078 CAGCATCTTCCGAAA GAGGCAAGCCG ACTTTC CGGCCTGCCTC TTTCTTGCTCTAGTT 100 102 LT478_RS01010 270483 .. 270502 + -7.8 -3.60098 CGTGGGGGCGGTGCG CATCCCGG TCAG CCGGAATG TTTCACGTGAAACAT 64 435 LT478_RS01015 272547 .. 272577 + -6.9 -3.55548 ACCTTTCTCGTTCCT GATGCCCCC TTTGCTCAAACTT GGGGGCATC TTTACGCACCTCTTC 58 403 LT478_RS01020 NONE phnC NONE LT478_RS01030 NONE LT478_RS01035 276659 .. 276669 + -6.8 -3.14132 AGTCCTCGCTTCGCT GCGA AAC TCGC TTGGTGGGCACCACC 54 105 phnG NONE phnH NONE LT478_RS01050 NONE LT478_RS01055 NONE LT478_RS01060 281255 .. 281270 + -9 -3.23638 CTCCAAGCCCTCGTC GCGTAC CAAA GTACGC TTCCTCGGTCTTTCA 61 93 LT478_RS01065 NONE LT478_RS01070 283660 .. 283682 + -3.3 -3.34043 CTGGCAAAACGCCTG GTCGTGGAA AACCA TGCCCCGAC TTCTCGCATAGTCCG 47 271 LT478_RS01075 284824 .. 284843 + -10.7 -5.00616 ATCGACTTCGCCGAA CGCCCCT GATCCG AGGGGCG TTTTTTCGCGCGCCC 100 282 LT478_RS01080 NONE LT478_RS01085 287006 .. 287018 + -6.9 -3.07816 AAGTACGACGAACTT GCCGC CAA GTGGC TTCAGTAAATCAACC 52 5 LT478_RS01090 NONE LT478_RS01095 289261 .. 289271 + -8.2 -4.208 GGCAACCCCAAGCGA GCGG CAC CCGC TTTGTCGTTTTGAGC 75 82 LT478_RS01100 NONE cydB 292273 .. 292298 + -20.5 -3.8766 AGAAGCGAACTGCCA GGAGCCGTCGG AAAT CCGACGGCTCC TTTGCTATACTGTCG 100 62 LT478_RS01110 293432 .. 293456 + -20.1 -3.39895 GTCGTCGCAACGAAA GAAGGCGCGCA TCA TGCGCGCCTTC TTGCTTGATGCGGGG 100 97 LT478_RS01120 NONE LT478_RS01125 296638 .. 296664 + -5.8 -3.69395 AGGCGCTCGAAGTAC CGGCTC-CGGC CGCAGT GCCGAGAGCCC TTCTTCGGTCGTGCC 57 74 LT478_RS01130 297517 .. 297549 + -9.7 -3.29461 AAAGCGCCTCTCCGC GCGGCCAAAGCGCAG AGG TTGCGCATCGTCCGC TTGTCGAAGGAGTTG 63 103 LT478_RS01135 NONE LT478_RS01140 300193 .. 300203 + -4.6 -2.9155 TGTCAACCGCTTCGG CGGC TGG GTCG TGTGCTGTTCAACGA 45 266 LT478_RS01145 301055 .. 301075 + -15.4 -3.70007 GATGATCTAAACGTT CCGCCGGC CACGA GCCGGCGG TTCCTTTTCCATCGT 93 31 LT478_RS01150 NONE LT478_RS01155 302672 .. 302716 + -31.9 -4.08216 TAGACAGCGCCAAGC CATAAAGCGAAGTTGTCCGAC CTG GTCGGACAACTTCGCTTTATG TTTTCCAGAGCGTAC 100 60 LT478_RS01160 NONE LT478_RS01165 NONE LT478_RS01170 306076 .. 306132 + -14.5 -2.93616 TTGCGCATGGATTGA GGTGTTGCC-GGTGGACGTTCGGCCT CTTGTT AGGCCGGACGTCCACGAGGCGACAAG TATCGTCTTGGTGCT 79 26 purB 308318 .. 308346 + -21.1 -4.7497 CTTACGTAGAGGCAT CAGGAAGCCCCGT CCT GCGGGGCTTCCTG TTTTTGATGGGTGCG 100 55 LT478_RS01190 NONE LT478_RS01195 312574 .. 312588 + -9.2 -3.53012 AAGGGGAGCGCCGGG TGCCGC AGA GCGGCG TTTCGAGAGAGCAAC 66 66 LT478_RS01200 313480 .. 313507 + -14.2 -3.30124 ACGGGTAGAACTTTC GTTCCGTTTGCC TAAC GGCAACCGGAAC TTCTCGACGCTGCGA 81 11 LT478_RS01205 NONE LT478_RS01210 318058 .. 318085 + -20.6 -3.31157 GCATCAAGTTTTCTC GCGCGGCGCATC TTCG GGTGCGCCGCGC TTGCTATACTGGTTG 100 50 LT478_RS01215 NONE LT478_RS01220 318606 .. 318618 + -2.7 -4.41348 ATGCCAAAGCTGCGG TCATT TGG AATGG TTTCTTTAGGAGGAG 63 4 LT478_RS01225 319835 .. 319863 + -8 -3.61517 TTGGCGGCTTCGTTC GGGCGCGATCGG GCTTG CCGCTCGCGTGC TTCTTCGCCGCCGCT 63 476 LT478_RS01235 321348 .. 321366 + -6.6 -5.4505 TGCAGGCGGAGGAGC CCGCGTTC TAA GAGCGCGC TTTTTTCTTCGGGAC 95 15 LT478_RS01250 326359 .. 326369 + -4.6 -3.59979 GTCGGCCCATAGCGC GCGG CGG CTGC TTTCAAGTGGCCGCC 54 101 LT478_RS01255 327422 .. 327450 + -14.5 -3.45571 GGATGTTATTGTGCG CCCGGTTCGTCCC TCT GGGACGACCGGGG TTCGTCTTTCGACCA 90 137 lysA NONE LT478_RS01295 335998 .. 336028 + -20.5 -4.13767 CACATCGACGCCCCT CGAACGGCCTCGC CTCGT GCGGGGCCGTTCG TTTTACACTACCCCC 100 50 LT478_RS01300 338233 .. 338256 + -5.8 -4.34402 ATGGCGTAAGGACGC GATGCGCCGC GAAT GCGGAGCGCC TTTTCCTGTGGGCGC 71 32 LT478_RS01305 338871 .. 338887 + -2.1 -3.53091 AAGTCGTAAAGGTCC GCCGTGG ATA TCGCAGC TTTCAAGCGCGAGCT 47 32 LT478_RS01310 339328 .. 339339 + -2.2 -3.55622 GAGGATGTTCGGATA CGTGG TGC CC-CG TTTGGAGGGCTTGGA 47 39 LT478_RS01315 NONE LT478_RS01320 NONE dnaK 343199 .. 343223 + -5.5 -4.03078 CATGGGTTGCATTTT GCGCCCACGTC CCG GCGGTCGGCGC TTTCTAGTATCATGG 65 234 pyrE 344023 .. 344058 + -24.2 -3.53012 CCAAGCGAATGCGAA GGCCCGATCGACGC-CA TCA TGCGCGTCGATCGGGCC TTTCAGGAGGGGAGG 100 79 LT478_RS01340 347518 .. 347528 + -8.2 -3.55622 CAAGAAGACGATTCG CCGG GCG CCGG TTTAGCGGCGTTCGG 62 129 LT478_RS01345 348240 .. 348270 + -15.4 -4.64676 TGGAACTAAAAGAGG CGAGGGGTGCTTCG ACT TGAAGCGCCCCCCG TTTTGTTCCCGCTAG 100 32 LT478_RS01370 NONE LT478_RS01375 352226 .. 352251 + -16.1 -4.4267 GCCGCGGACATTCGA GCCCGCTCGCT TCCC AGCGCGCGGGC TTTTCGCTTTTCCAC 100 63 LT478_RS01380 353910 .. 353929 + -2.8 -2.57132 GGGAAGGAGGATTTC GGAA-GGGC ACG GCCGATTCC ATTGTCAAAGGAGGG 38 53 LT478_RS01385 NONE LT478_RS01390 NONE LT478_RS01395 356719 .. 356768 + -10 -3.07113 GTTCACGGCCGCCTA AGGTG--GGGGAGGGGCCG-GGTGC AGA GCGCCCCGGCTCCTCCTCAGCGCCG TTCCGTCCGATACTC 64 25 LT478_RS01405 NONE feoB 360224 .. 360272 + -12.4 -2.80816 TAACGTCCTCCCGCG CCTCCCCGGAGCGCCTAGCGC ATGGCGGC GCGGTAGGCGCTG-GGGGTGG TGTGGTGGGTGCGGG 69 38 LT478_RS01420 362758 .. 362810 + -29.8 -2.78384 GCCGCGCGGGCGTAA CGCGCAGGCGGCCCGGGTCGCGCG GCAGG CGCGCGTCCCGGGCCGTTCGCGTG TCTGCTAGCCGGCCA 100 26 LT478_RS01440 NONE LT478_RS01445 NONE LT478_RS01450 NONE LT478_RS01455 369184 .. 369200 + -9.4 -4.36914 GGAAACGGAAGACGA GGCGGA CGGGA TCCGCC TTTTCTCGAACCAAA 82 51 LT478_RS01460 NONE LT478_RS01465 NONE LT478_RS01470 372179 .. 372198 + -3.4 -3.58533 CGGGAGTCCCTCGAT CCTGTGCC GGCG GGCGCGCG TTTCGGGCATTCTGA 51 63 LT478_RS01475 NONE LT478_RS01480 375926 .. 375936 + -8.2 -4.0162 CTGTTTGGAGCGGAA CGGG CGG CCCG TTTCTGCTATACCGG 71 95 LT478_RS01485 376516 .. 376538 + -16.2 -3.21218 ACATCCGTCCCATCC GCTGCCGCGC CGC GCGCGGCCGC TTCGTGATGGGCGCT 85 162 LT478_RS01490 377391 .. 377406 + -6.2 -3.49618 CGGCCCCTTTCCCGA TGTTTC ACGT GAAACA TTCGTTCTATGCGCA 55 122 LT478_RS01495 NONE LT478_RS01500 NONE LT478_RS01505 NONE LT478_RS01510 NONE LT478_RS01515 NONE LT478_RS01520 382475 .. 382485 + -4 -2.7185 TGTAACTTGCTATTT GTAT GAT ATAC TCATTGCGAAATACT 41 70 LT478_RS01525 383918 .. 383933 + -3.2 -4.28994 GGAGCGTTCGCATTC CCAACT GAGA AGGTGG TTTTGGTGGCTCCTG 65 130 LT478_RS01530 NONE LT478_RS01535 387892 .. 387925 + -7.4 -3.74693 GCTCGCGGTCCTCGG GCGCGACG-G-CGCGT CCCG ACGTGTCCCGGCGCGC TTTCGTGCGCTCGAC 65 381 LT478_RS01545 NONE LT478_RS01550 NONE LT478_RS01555 391604 .. 391625 + -2.8 -3.90574 AGGGTTGCCGAGGGA GCGCGGCG CTTTGC CCCCCCGC TTTCCTGTGCTTCTT 54 45 LT478_RS01590 NONE LT478_RS01595 NONE LT478_RS01600 406112 .. 406147 + -7.5 -3.14132 TAGCGCACGGTGCGC CCGCG-GGCC-AGCAGC ACGA GCACCTCGGCCTCGCGG TTCGTCAGGCGGCAC 55 192 LT478_RS01610 409324 .. 409354 + -12.6 -4.56597 TGCAACCCTCCCCGA GCCCTGCGCC ACCTCCCTCCC GGCGCAGGGC TTTTTCGCGCCCGCC 100 70 rplM NONE rpsI 411546 .. 411567 + -13.7 -4.99035 CACGTTTTCTGCAAA GCCCGTCTC TTCG GAGGCGGGC TTTTTCTATGGATCC 100 67 LT478_RS01635 NONE LT478_RS01640 NONE LT478_RS01645 NONE LT478_RS01650 415837 .. 415851 + -5 -2.78935 CGTGCAGATAGCGCG CGTTGT GGG ATAACG TGTACTACGACGTCT 43 13 LT478_RS01655 416137 .. 416152 + -4.7 -2.88708 CGGGCGACGGTCGAC GGATC ACGGGG GATCC TCTGGTATCGTATGT 45 54 LT478_RS01660 417001 .. 417036 + -2.6 -4.63218 AGCCGGAGAGCGCGT TTTCGCT-TAACCGGCA TCT TGTCGGTTATAGTGCGG TTTTCTTGCCGACGG 68 288 LT478_RS01665 417694 .. 417704 + -2.4 -3.86935 TTCGCATTATGCCGA CCGC CTT GCTG TTCTTGTCCTCGTTC 54 79 LT478_RS01670 418737 .. 418760 + -2.2 -4.56597 GCCATCAGACCCATT GCGAGCGACG CGGT CGTCTCGGGC TTTTTCGGGAGAGGA 66 183 LT478_RS01675 419703 .. 419713 + -3.2 -3.08173 GGAAGGCGGAGGTGC CTGA TCG TCGG TTGCCTCGGGTTCCT 43 44 LT478_RS01680 420090 .. 420117 + -20.6 -4.72272 TCCGATTAGCGAGAA GGGCGCGGGAGG CGAC CCTCCCGTGCCC TTTTTAGTCGGGGCG 100 32 LT478_RS01685 421533 .. 421552 + -7.8 -3.1637 GGGTGGATTGCTGTA GCGGCGAT TGCG ATCGCCCC TTCATGGAAATGTAT 57 25 LT478_RS01690 NONE LT478_RS01695 NONE LT478_RS01700 426893 .. 426906 + -4.5 -3.5764 GGGTTTCGCACGAGA CGGAC CGCT GTTCG TTTCGGAATGCAATT 54 154 LT478_RS01705 428230 .. 428245 + -9 -3.61398 CCAATAAGTGAGTTG CGCACT TTCA AGTGCG TTGTTGAAGGCGCCC 68 71 LT478_RS01710 429020 .. 429052 + -15.7 -4.56597 AACTAGACGAAGTTC GGACTGCATCGCG AACTCGG CGTGATGCAGTCC TTTTTGGAAGGGGAG 100 35 LT478_RS01715 NONE LT478_RS01720 NONE LT478_RS01725 NONE LT478_RS01730 NONE LT478_RS01735 432906 .. 432939 + -24.7 -4.56597 ATAATGCGAGACGGA CCGACAGCCCGCTTC CTCG GAGGCGGGCTGTCGG TTTTTGAAGCGAAGC 100 45 LT478_RS01745 436758 .. 436768 + -3.2 -2.58544 CGTCGAAGGGAGGCG CGAT GGA GTCG GTTATGACCGTGCGG 40 94 LT478_RS01750 437161 .. 437182 + -5.9 -3.17229 CTTCTTGAAACATTT CGCCGTTAGT TTG ATTA-CGGCG TATTGATCATGCGGT 50 67 LT478_RS01755 439402 .. 439426 + -24.3 -3.1855 AGCGAAACGCTTCCA GCGGCCCCGGC TAT GCCGGGGCCGC TTGCATGTTCGCCCG 100 40 LT478_RS01760 440992 .. 441014 + -12 -3.24747 CGGCTCCGGTATCGC CTTCCTGCTG CGA CAGCAGGACG TTGGTGCTGTACGGC 71 300 LT478_RS01780 NONE LT478_RS01785 446208 .. 446225 + -10.5 -3.16564 ATCTGGGGCGGGGGT CGGCTGC TGGG GCGGCCG TTGATGGGGTGGGGG 65 253 LT478_RS01800 451441 .. 451487 + -16.6 -4.56597 ATAGGTTGGTATGTC GCGAAGCCC-CC-ACCGTCCGC TGCTT GCGGCCGGCCGGAGGGCTTCGC TTTTTGAGCGAAGGA 100 44 cimA NONE LT478_RS01810 453657 .. 453691 + -15 -4.14541 GCGAGCAGAAAAGAG CCCCAGGCGGCGGAAG GAT TTTCTGTCACCTGGGG TTTCTCTAGTTGCTC 100 284 LT478_RS01820 NONE LT478_RS01825 456827 .. 456849 + -9.1 -3.01745 CAGCGCGTGGAGATC GCGTGACCG TTACC CGGTCGTGC TATAGTTGTTGCGAA 60 99 LT478_RS01830 NONE LT478_RS01835 458633 .. 458662 + -9.9 -4.13767 GGCAAAACCTATGCA GGGGGACCGACGG TTTC TCGTCGGTCCCGA TTTTCGCATCCCGAG 80 49 LT478_RS01840 459963 .. 459975 + -6.2 -2.50492 AAAACGAGGGGAGAA GCGC ATGAA GCGC CTGTTGATCGTAGTG 45 18 LT478_RS01845 460499 .. 460541 + -17.7 -4.05788 AAGTGACCAACCGCT AACCGA-GGCTGCGGCGGCC GTCG GGCCGCCGCAGCTGTCGGAC TTTCGTTTACGCCAA 100 24 LT478_RS01855 464369 .. 464379 + -8.2 -3.80573 GGCTTCGAGGCTCTT GCGC GAC GCGC TTTCGTACTCGTACG 67 514 LT478_RS01865 466040 .. 466054 + -5.6 -3.75153 TCAAGGAAGGTGTCA GGTGCG TTT TGCGCC TTTCGCTTCCGGAAA 60 229 LT478_RS01870 467830 .. 467866 + -16.7 -2.78384 AAATAGATTCTTGGG ATGGTGGCCAAGCGA TGTTGTT TCGCTTGGCCACCAC TATGGTCGGGACAAA 84 35 LT478_RS01875 468933 .. 468943 + -3.2 -4.96028 TCCTGAAAGGCTTAT GATC GGA GGTC TTGTTTTTTTTGGGG 77 24 LT478_RS01895 NONE LT478_RS01900 475363 .. 475395 + -14.2 -3.85165 TGGCTATGCTGCTAA GGACTGGTTCCGGA ATTCC TCCGGGGTCAGTCC TTTCAGTTTAACCTG 91 105 LT478_RS01915 477474 .. 477489 + -6 -3.53224 AAGGCCTCGTTTTCA GGCGCG ATTC CGCGGC TTTCGGGCGACAATG 55 79 LT478_RS01925 NONE LT478_RS01930 481907 .. 481936 + -18.6 -3.34398 ATCTAACGGCATCAA GCTGGGCGGCCG CTTCGT CGGCCGTCCAGC TGTTTCGGAGGGGAA 95 35 LT478_RS01935 482679 .. 482693 + -4.2 -2.79796 AAGTAGCTAGGCATC GGGC GGTCGAA GCCC TATCATGAACTGAGC 43 35 nrfD NONE LT478_RS01945 NONE LT478_RS01950 485089 .. 485146 + -25.9 -3.54424 GCGTTGTTGCAGAGG CATTATCGGCCCAAAGACACGGTTTTC GCGC GAATTCCTTGTCTTTGGGCCGATAATG TTTGCGGGAATACGC 100 52 LT478_RS01970 491554 .. 491595 + -20.3 -3.96327 TCCCCTGTCGCAGTG CAAAAGAAAGCGCTCCTGC ATAA GCAGGAGCGCTTTCTTCGG TTTGTGCTGCGCAGT 100 80 LT478_RS01980 496744 .. 496778 + -30.1 -3.05384 CATCAGAATCGCGAA CGGGGGCGGGGACGC ATCGA GCGTCCCCGCCCCCG TTCCGTCCGCGCACC 100 63 LT478_RS02000 501716 .. 501726 + -3.2 -3.9534 ACCATGTCGCCACGG TGCT CGA GGCA TTTGTAGGTATCCAT 58 491 LT478_RS02010 505314 .. 505324 + -6.8 -3.47349 GGTCGTTTCCTTCGT CGCA GTA TGCG TTGTACGTTTCGAGC 57 409 LT478_RS02025 509206 .. 509217 + -5.8 -3.14132 GGGGATACGCTTGCT GTGG GGAT CCAC TTGCTCGGGGCAGGC 49 136 LT478_RS02060 516654 .. 516664 + -2.4 -3.41602 ACATGATGGATGATG CGGC GGA GACG TTGTGCTAGGATAGC 44 6 LT478_RS02065 518622 .. 518634 + -9.1 -3.53091 TCCCCCGCATCCCGC GAGCG TCC CGCTC TTTCCCCGCGCGCAT 66 359 LT478_RS02070 520347 .. 520370 + -16.7 -5.81412 AACACGCACTGGAAA CGCCGCCCG GACGAA CGGGCGGCG TTTTTTTTGCGTGCC 100 55 LT478_RS02080 NONE LT478_RS02085 524067 .. 524078 + -7.2 -4.07568 GCGCTTGTCCTAAAA GGGG ACAG CCCC TTTTAGGACAAGCGC 68 267 LT478_RS02095 NONE LT478_RS02100 527402 .. 527420 + -3 -3.56821 GGTCCCAAGCAAGGG CCGGCG CGCAGAA CGGCGG TTTCGACGCTATCGT 49 82 LT478_RS02105 529021 .. 529055 + -10.7 -4.25104 CACGCGCCTCGCTGG GAC-GCATTGGCCGGG GCAT CTCGGCCGTTGCCGTC TTTTCGTGCGACAGC 86 293 LT478_RS02115 NONE porA NONE LT478_RS02125 534159 .. 534189 + -18.4 -5.1764 TCGGCACGAGCAAGA TGAAGGGCGTCGTT TGC AGCGGCGCCCTTCA TTTTTATATTCTATC 100 53 LT478_RS02130 NONE LT478_RS02135 535856 .. 535866 + -2.4 -3.35775 CCTGGTAAACAGGCT CGCC ATC GGCA TGTTTGCGAGCTGGT 45 276 LT478_RS02145 539823 .. 539838 + -2.6 -3.04609 GGCCTAGGGGGTAGA CCATGAC TCA GT-ATGG ATTTCATTTCGATGG 41 34 dmsB NONE LT478_RS02155 NONE dmsD NONE LT478_RS02165 543167 .. 543180 + -2.3 -3.4072 TCATGATCGCCGAAG TGCTG GGGA CGGCG TTGTGGTACGGCATG 44 464 LT478_RS02175 NONE LT478_RS02180 545477 .. 545495 + -4.5 -2.62933 GTGCGGATGATCATC GCGGTAG GCGTG CTGCTGC TGATGTGCGCGATTA 43 43 LT478_RS02185 NONE yaaA 547331 .. 547360 + -7.9 -2.73124 GAGCTTTCGAATCCC GGCGGTTTTCG GGTGGATG TGAAAGCCGCC ATTTCGCGCATCGGA 53 198 leuS 550069 .. 550098 + -17.9 -4.07885 AAGGCTGGGACATTG AGGAACGGCTCGG GTTT CCGAGCCGTTCCG TTTTGGAGGGGGCTA 100 51 LT478_RS02205 553588 .. 553616 + -8.7 -3.53012 GCTGTACGAATTGCT CGGCATCGCCGAG TAG CGCTGCGATGCGG TTTGAAGGAGGCGCG 66 10 LT478_RS02210 555106 .. 555116 + -8.2 -3.1634 GTGCTGCCGTCGAGC GCGC CGA GCGC TTCGATGCTTTGCAC 57 432 LT478_RS02220 558219 .. 558241 + -3.3 -3.54475 CGCTTCGCGCGCATG GGCGGCGAG CAAAC CTCGTTCCC TTGTCTCCTCGAACC 49 93 LT478_RS02225 559183 .. 559206 + -6 -3.61398 CGAAAACCCCGTGCA GGCG-AGCG CGATGAC CGCTGCGCC TTCTTCGCGCAGGCG 57 177 LT478_RS02240 NONE LT478_RS02245 NONE LT478_RS02250 NONE nrfD 566061 .. 566108 + -31.6 -3.86015 CAAAGGTGTGACAAA GGGACGGGTGATTCGACACCCT TTAC AGTGTGTCGAATCACCCGTCCC TTTGTCACGCGGCTA 100 265 LT478_RS02265 NONE LT478_RS02270 NONE LT478_RS02275 NONE nrfD 572345 .. 572379 + -13.6 -3.09273 GCTTTTCCTCTTTCA TGGGCGCTGCGC ACTCCCCCTCC GCGCAGCGCCCG TCTGTATTCCGACGA 76 114 LT478_RS02285 NONE nrfD NONE LT478_RS02295 577822 .. 577847 + -6.8 -4.02534 ATGAGGGAGGGCGCG GCAGC-CGCGC GCTGG GCGCGAGCTGG TTTGTGAATTTCGCT 68 190 LT478_RS02300 NONE LT478_RS02305 NONE dapB 581190 .. 581230 + -3.8 -3.65351 GGCGATCGTGCAGGC GA-ACAGGGCGCCGGCCAGC ACG GC-GGCCACCGCCCAGCCTC TTTGGATGCGGGTCA 53 158 LT478_RS02320 582427 .. 582456 + -20.7 -6.23317 CTCGAAGACCTTCAA GCCGCCGACGCCC GAAA GGCCGTCGGCGGC TTTTTTTGTTTTTGT 100 52 LT478_RS02335 NONE LT478_RS02340 592676 .. 592706 + -18.4 -4.62069 GAGGCGCACGTCTTG GCGGGGTACGCT AAAATAC AGCGTACCCCGC TTTTTGGGATAGGGG 100 110 LT478_RS02345 NONE dmsD NONE LT478_RS02355 595410 .. 595423 + -8.1 -3.60792 CAAGGCGTTGGCCAT GCGCA TCGA TGCGC TTTGGCGGTTCAGCA 63 478 LT478_RS02385 NONE LT478_RS02390 NONE LT478_RS02395 608148 .. 608158 + -8.2 -2.71364 GACGCTGCGACTTCG CGGG GCG CCCG TCCTTGGCACGATCC 53 59 LT478_RS02400 NONE LT478_RS02405 NONE LT478_RS02410 NONE LT478_RS02415 610918 .. 610947 + -14.3 -3.14132 GGGCGGTGGTTGCGG GGAGGGGCCGGCTC GTA GGGCC-GCCCTTCC TTCATCACCGCCAGC 76 201 LT478_RS02425 NONE LT478_RS02430 NONE LT478_RS02435 615479 .. 615496 + -4.9 -3.57263 GTGCAGATGCCGTTC GC-CGAAA CGC TTTCGCGC TTTAAGCGTGGGACT 54 277 LT478_RS02445 617932 .. 617947 + -11.8 -4.15044 TCTCAAGCTGAGAAA GGCCCC TATC GGGGCC TTTCTTGAGGGAGGG 89 114 LT478_RS02455 621483 .. 621502 + -12.2 -2.73159 CCAGGCCTTTTGCGC GCGCTTCT AGCG AGAAGCGC ATTTCGAGCACTTGA 69 241 LT478_RS02460 623683 .. 623705 + -9.1 -3.07113 GCTTTGCGCTTCGGA CGGGTTCGC CTTGT GCGAACGCG TTCCATCGGCTAGTA 60 88 LT478_RS02465 625227 .. 625251 + -7.8 -4.12188 ATCCTCGCTCGAAAA ACACGCCTCG TTCGC TGAGGCGTGC TTTTCGAGATCGTCA 71 54 LT478_RS02495 632465 .. 632478 + -2.3 -5.53288 TTTTCTCTGCAAGGT CTTCC ATAT GGATG TTTTTTTGACTTGCA 100 425 LT478_RS02505 NONE LT478_RS02510 NONE LT478_RS02515 637935 .. 637954 + -10 -3.29511 CAAACGACGGATCGC CCTCGAAG AGGG CTTCGGGG TTCTGCGAGCGTCGC 68 249 LT478_RS02535 NONE LT478_RS02540 NONE LT478_RS02545 645535 .. 645559 + -6.6 -4.17048 GAACCCTCCTCCGGG CGAATTGTTTC ACGT GAAACA-TTCG TTCTTTTACCGCAGG 71 156 LT478_RS02550 NONE LT478_RS02555 647740 .. 647756 + -7.9 -4.1822 TAGCTTGTCACAGCG CGCCCGA GCT TGGGGCG TTTCTTCGGCTCGAA 71 297 LT478_RS02565 NONE LT478_RS02570 NONE LT478_RS02575 653187 .. 653244 + -3.3 -3.86346 TGGCTCCGCCGCGCC GC-CG-GTCCGGGCGGCGCGTCCTCCGG CCCGC CCGCGGGA-GCGCTGCTTGGCCGCATGC TTTCTGCAGACGTCG 56 43 LT478_RS02585 NONE LT478_RS02590 NONE LT478_RS02595 660236 .. 660269 + -10.1 -3.63515 CCCGGCGCCCTCCGC GGGGTCCGGAGGGGG AGAA CCCCCTCCGGGCGAA TTGTTCCACGTGAAA 73 107 LT478_RS02605 664282 .. 664308 + -15.1 -4.6902 GCATCCCCTGAAGCC GCCGCCCCTCC CTCCC GGAGCGGCGGC TTTTTCGCGTTCTGA 100 78 LT478_RS02610 665983 .. 665994 + -3.6 -3.86194 GCGCACGTCGGCGCC GGGC TTGA GCTC TTTGTAGGGGCGGTT 56 286 LT478_RS02620 667397 .. 667420 + -19.6 -3.16492 AGCGGGTTCCCGCCG GGCGAGGGCG GCGT CGCCCTCGCC TATTCGTACGTCTCA 91 39 LT478_RS02630 671043 .. 671060 + -2.6 -2.55544 GGGTCTCGAGCCTTG GGACGC CAAGTA GCATCC TCCCTTCGCTGATCG 38 13 LT478_RS02635 671939 .. 671964 + -13.3 -3.66654 TTCGGGGTCATCGAA GACCCGGCC CCTCCCTC GGCCGGGTC TTTCGCGTTGGGATC 88 96 LT478_RS02640 672918 .. 672942 + -22.9 -3.06162 CAGCAATGAAAAAGA GGCCCGCCGGA GCA TCCGGCGGGCC TCTTCGCATCCCGTG 100 130 cpaB NONE LT478_RS02655 NONE LT478_RS02660 NONE LT478_RS02665 NONE LT478_RS02670 NONE LT478_RS02675 678748 .. 678766 + -4.5 -3.61715 GGGAACGGTCGAGTT CGCG-CTG GTTA CGGCCGCG TTCTTGGCAGCAGTC 54 93 LT478_RS02680 NONE LT478_RS02685 NONE LT478_RS02690 NONE LT478_RS02695 NONE LT478_RS02700 NONE LT478_RS02705 NONE LT478_RS02710 NONE LT478_RS02715 NONE LT478_RS02720 684395 .. 684453 + -8.7 -3.04792 GCGTAAAGGACGCTC GGAACGGG-GCGGCAGCGTCGTGGCGTT CGTC ATCGCGCTGCCCCTGCTGCTCCTGTTCC TGTTCGCAGTGGTCG 60 35 LT478_RS02725 NONE LT478_RS02730 NONE LT478_RS02735 NONE cpaB NONE tadA NONE LT478_RS02750 NONE LT478_RS02755 NONE LT478_RS02760 NONE LT478_RS02765 NONE LT478_RS02770 692826 .. 692838 + -3.4 -2.82681 CGAGAGAGGACGAAC CATG CGTTA CATG TATCCTGCGATTTTC 41 55 LT478_RS02775 693700 .. 693710 + -4.6 -3.15758 CCATGCCCAGGATGT TGCC CAA GGCG TTGCTGGCGAATTCT 47 434 LT478_RS02795 NONE LT478_RS02800 699102 .. 699112 + -3.2 -4.11412 GCAAGGTCGCTCATG GGAT TCC GTCC TTTGCTTGTTGCTTG 59 405 LT478_RS02815 NONE LT478_RS02820 703468 .. 703509 + -7.4 -3.59979 TCCGCAAGCCACGCA CGAGCACGAACGGATGTTTC ACGT GAAGCATCTGC-CGTGC-CG TTTGGCGTGCGCGCA 60 45 LT478_RS02825 703844 .. 703861 + -9.1 -5.03314 CAGGTGACGAGGATA GAGGCGC CGCG GCGCTTC TTTTTTGGGACTGAG 100 60 LT478_RS02830 706499 .. 706543 + -9.8 -3.01712 AGCGTCGCGTAGGCG AAGCGGCTTCGGGCCCGAGGG AACC CCCTCGGGCCTGT-GCCCCGA TGTTCCGAGAAAGGA 64 29 LT478_RS02835 706834 .. 706857 + -14 -3.8901 AACGCGATCAACGAA CGGATGTTTC ACGT GAAACATCCG TTTCGTCATTTGGGG 91 64 LT478_RS02840 707689 .. 707735 + -16.6 -2.7314 TCAACAAGTTCTTAA CGACG-CGCCCGCCC-GCC-CCG CCCT CGGTGGCAGGGCGGGCGTCGGTG TGGTATGCTTTCCCC 84 91 LT478_RS02845 NONE LT478_RS02850 NONE LT478_RS02855 710460 .. 710487 + -2.6 -5.02323 CCGGAAAAATAAGCC GCTGGCGC AGCGCACGGAAA GCGCCCGC TTTTCTTTGTGATAC 78 505 LT478_RS02865 711628 .. 711647 + -11.4 -5.00616 GATGCACCTCATCAG GGCCCGGA TTCG TCCGGGTC TTTTTTAGCGCGCCA 100 58 LT478_RS02875 714950 .. 714976 + -10.9 -2.62184 GGCGGCCAAGAACCT GCGGGCGAT-CC GGAA GGTATCGCTCGC TCATCTGCCAAGGAG 64 97 LT478_RS02880 715615 .. 715648 + -11 -3.1984 GCGGACGTCCGAGAA GGGGGCATGCGT-GC AACAA GCTGCGCATACCCCC TCTGTTCCTCTTGTG 69 53 LT478_RS02885 716788 .. 716803 + -4.6 -3.44848 TCTCCTCGATCGGAA GCTCGA ACGC TCGCGC TCTTTGATCGAAACC 52 200 LT478_RS02890 717460 .. 717483 + -16.8 -4.21194 AAATCGCTTCACATT GGAAGAGCCC AGCG GGGCTCTTCC TTTTGCGTGCTAAAG 100 59 leuC NONE LT478_RS02900 NONE leuB 720499 .. 720521 + -14.9 -5.24531 TTGCAAAGTAAAAAA GAAGCGCCC TGAAC GGGCGCTTC TTTTTTGTCAGCGGT 100 49 LT478_RS02915 725537 .. 725562 + -6.7 -3.20858 GCTCATCTCGATGGC GGGCGCGCCGT TCGC ACGGCTCCTCC TTGCTCCCTATGGTA 54 168 tyrS 726856 .. 726879 + -16 -3.9941 ATCGTGTAATAATCG GCAGGCGGCT TTCG GGCCGCCTGC TTTGCTTCTGGAAAA 95 54 LT478_RS02925 NONE LT478_RS02930 NONE LT478_RS02935 728854 .. 728878 + -10 -4.17316 TAATCAACCGGTATG TGTGGCACTC GTGGA GGGTGCCACG TTGTTTTGCCGGCGT 84 38 LT478_RS02940 730932 .. 730944 + -2.6 -3.02829 GGGTCCCGTCGCGAG GGTC CGCCT GGCC TCTTCGCCCGCTGTC 41 117 LT478_RS02945 NONE rrf 734348 .. 734364 + -7.9 -3.57144 GGGAGGATAGGGCGT CGCGCTC GCG GAGGGCG TTTCGGCATGCGGAG 64 18 LT478_RS02955 NONE LT478_RS02960 735552 .. 735585 + -24.1 -3.95071 TTGACGAGGTCGTTC GAACACCCTCGAAGC TTGG GCTTCGAGGGTGTTC TTCTTTGCGCGTTTG 100 49 LT478_RS02965 738340 .. 738350 + -2.4 -2.62613 TTGGGCGAGTGATGG CGGC TTC GCGG GTGTTTGCGCTACAA 38 29 hisS 739819 .. 739836 + -14.1 -3.17075 GAGCAAGACGACGAA GGCGGCC GAGA GGCCGCC TTCGCTTGGGAGAGG 78 68 LT478_RS02980 743360 .. 743387 + -14.8 -3.01712 GGGATTGATATGAGG CG-CGCCCGCGCC GCC GGGGCGGGCGGCG TGTTCGCGAGGGGCG 80 28 LT478_RS02985 NONE LT478_RS02990 744368 .. 744378 + -2.4 -3.53012 GCATTTTGCATGAAA CCGG ATA CCTG TTTCGACCCGCGCGC 47 55 aspS 746295 .. 746324 + -17.9 -3.49475 GCGAAAGAACGCATC GAGGGGCCCGTTG ATCT CAACGGGCCCCTG TTCTATCCGAATGCG 100 49 ffs 748212 .. 748227 + -2.4 -3.05536 CCATAAGGGACCGCT GGCGAG CGCC CCTGCC TATTCGAGATACTTT 41 1 LT478_RS03010 NONE dnaX 751356 .. 751371 + -10.4 -3.61398 CGCGACAGCTAGTTC GCCGCA CGTA TGCGGC TTGTTCGAAACGACC 73 41 LT478_RS03020 751755 .. 751770 + -2.6 -2.63596 CTTATGTAACCTGGT TCG-GAT AGA ATCGCGA TCATGTACGCTGCGC 38 32 recR 752397 .. 752408 + -5.8 -3.92324 GGGGAGTTTACTCCT CTCG CTTG CGAG TTTAATCTTGCCGCG 62 53 LT478_RS03030 754059 .. 754084 + -11.1 -4.0492 CGATCTCGCCTCCCC TCGATGGCCGC CTCT GCGGCCATTGC TTTGTCTAAGGGTTG 84 49 LT478_RS03035 756970 .. 756981 + -5.8 -3.07043 CTGAATTCAGCGAAT CCAC TGAG GTGG TGTTCAAATAATGGC 49 3 LT478_RS03040 NONE LT478_RS03045 NONE LT478_RS03050 759106 .. 759160 + -17 -2.72344 GGAAGGGAAGCGGCG CGTGAGGGCGTCGACGTTGCGCGTGC TGA GCGCGCTCGGCGTCGCGGCTCTCGTG TGCTTGGGGCTGGCG 84 45 LT478_RS03055 NONE LT478_RS03060 NONE LT478_RS03065 761369 .. 761381 + -3.4 -3.84451 GGCAGGTCAAACCCT CGAT AAACC ATCG TTTAAATTTCGGAGG 54 73 LT478_RS03070 763061 .. 763075 + -7.8 -2.58544 GGCGAGGATTTCCTG CTCGCG CGC CGTGAG GTTGTGCGCGTCCGC 50 470 LT478_RS03080 766456 .. 766496 + -19 -3.64822 CCTGCCATACCCTCC CTCCCTCGGAAGCCGCGCC TTTT GGCGCGGCTTCCG-GCGTG TTTGCGTGCGGGGGT 100 49 LT478_RS03090 NONE LT478_RS03095 NONE LT478_RS03100 772907 .. 772947 + -20.4 -3.9941 TTCGCGTTTTCCTCC CTCCCTCGGAGGCCGCGCC TTTT GGCGCGGCCTCCG-GCGTG TTTCGTTATGCAGCG 100 45 mobB NONE LT478_RS03110 775691 .. 775718 + -10.6 -2.72344 CCAAAGACACGGAAT TCGGCTCGGAAG TGTG TTTTCGGGCCGA TGATTCGCCCTCGCC 61 65 LT478_RS03115 NONE LT478_RS03120 777820 .. 777848 + -10.3 -3.28712 GGGCGCGGGTAGGAT GCTGCGCGC GGGAGGGGAGG GCGCGCAGC TTATGAGGGGAACGC 68 191 LT478_RS03130 781561 .. 781574 + -5.3 -3.18264 ACCGCCCAATCGAGG TGTTG TCGG CAACA TTGCTCGATAAGCGC 50 159 LT478_RS03135 NONE LT478_RS03140 NONE LT478_RS03145 NONE LT478_RS03150 NONE LT478_RS03155 786292 .. 786302 + -2.4 -3.90112 TTCGGACCCATGCGG AGCC AAG GGCC TTTCCTTGCGCGCGC 54 76 LT478_RS03160 NONE LT478_RS03165 NONE LT478_RS03170 NONE LT478_RS03175 NONE LT478_RS03180 NONE LT478_RS03185 NONE LT478_RS03190 NONE LT478_RS03195 NONE LT478_RS03200 NONE LT478_RS03205 796488 .. 796502 + -2.8 -2.57132 CTTCATTGACAAATG GCTTGT TGA ATGAGC GTTGTGGCCGAAAAG 38 13 LT478_RS03210 NONE LT478_RS03215 798486 .. 798508 + -5.4 -4.18506 GGAGCGTACGGGAAA GCGGATAGCG TAT CGCCTTTCGC TTGTTTTGAACATCG 68 66 LT478_RS03220 799438 .. 799462 + -4.9 -3.49482 CGCGTTCGGTATGCT GGCGGCTATGA GCC TCGTATGCGCC TCTTTGATCATGTCC 53 328 LT478_RS03235 803449 .. 803463 + -3.5 -4.2558 GCTGCACGTTGGCTT G-CCGG CGTT CCGGGC TTTTCGTGCAAGCTG 62 405 LT478_RS03240 NONE LT478_RS03245 NONE LT478_RS03250 807737 .. 807763 + -20.9 -4.18506 ATCGCGCCTTGCCGA GCGCGGCCGTC AACGC GACGGCCGCGC TTCTTTTCCCAGTCG 100 57 LT478_RS03255 NONE LT478_RS03260 809205 .. 809228 + -19.6 -3.63627 ATCCGTTTGCCTGAA GGGGCTCCGC CGTC GCGGAGCCCC TTTCGCGTGTGCGAG 100 55 LT478_RS03265 NONE LT478_RS03270 812209 .. 812220 + -2.2 -3.38046 CGTCGTCACTTCGAT CTTG AAAG CGAG TGTTTGAAATGGGAG 44 44 LT478_RS03275 NONE nrfD 813917 .. 813949 + -22.7 -4.11216 TCGCCGTCTTTCGCA AGCGGGCCGGCAGCC CTT GGCTGCCGGCCCGTG TTTTCGAGGTCGCCC 100 60 LT478_RS03285 NONE LT478_RS03290 815117 .. 815144 + -9.8 -3.35679 CTCGCTGAGCGCGGG CCGTTGCGGGGCG CCG CGC-TCGCACCGG TTCTGCATGAAGCAG 68 33 LT478_RS03295 816513 .. 816571 + -9.5 -3.01712 TTCGCGCACCGAATC TTCGCGCGATCCCGGAAGC-TCGCGTAC CGCA GTACGCTTCGCCTCCGCGATCCCCCGAA TCTTCGGCACGGGAA 60 89 LT478_RS03300 NONE LT478_RS03305 818463 .. 818504 + -8.6 -3.14564 CTCGCGGCGACGTGC GG-GCCCGCCCCGAGGAGCG ACCT CG-TCGACGGGGCGAGCGCC TTCGTGAGCGCGTCG 57 412 LT478_RS03315 820007 .. 820049 + -2.7 -2.62463 GTTGACGTCTGCAAG GTCGTCT-GATGGAGGCGGGG GAG CGCCGT-TCCGGCGAGATGAC GTTCTACGTCGTGCG 38 17 LT478_RS03320 820715 .. 820742 + -18.4 -3.28924 GGCCGTGAAGCGGAA GCGGCCGGAGCA AGCC TGCCCCGGCCGC TTCTGAAAGGAGCTA 95 33 ptcA NONE LT478_RS03350 827594 .. 827608 + -2.7 -2.85351 GGACCTGCTCATCGG CCGCG AGCCG CGCGA TCTGGTGTAACGCGA 40 1 aguA NONE arcC 829883 .. 829914 + -15.8 -3.37796 GCGTAAGCGCCGAAA GCGTGCGGCCCGTCG ATG CG-CGGGCCACGCGC TTCTCCATCGTGAAC 89 35 ptcA 838600 .. 838621 + -2.1 -3.05384 CACTGATCGAACGCT CCAC-CGGGC CGG GCCCGCGACG TTAGCTGACGCGGCC 41 89 LT478_RS03395 NONE aguA 841686 .. 841718 + -13.4 -4.7373 GGAGGTCGGCGGGCC ACGGAGCGGTCCTT TCGCC AGGGGCCGCTCCGC TTTTTCCTCACCTCC 100 214 arcC 842751 .. 842792 + -21.6 -4.09685 AGCGCCTCCGAAGCC CGAAAGGGCCCGCTGCCG CATGTT CGGCAGCGGGCCCTTCCC TTTTGCGCGGTCGCC 100 41 LT478_RS03420 846498 .. 846547 + -9.3 -2.57564 ATAACCTTGAAGGTT CTGAGGGTTTGAGCTAAGCGGCCT GAT GGGCCGTGT-GCGAAAACTCTCAG CTTCTGAAAGGCTAA 56 174 LT478_RS03425 NONE LT478_RS03430 NONE LT478_RS03435 849232 .. 849244 + -10.5 -3.17901 GGCGCCCCGGCGACA CCGGC TCA GCCGG TTCGCTTGAAGCTGT 65 52 LT478_RS03445 851904 .. 851928 + -11.4 -4.08945 CGGGTTTCGAGAAAA GGGCGCCC ACCCCCTCC GGGCGCCC TTTTCGCGCCATCGT 84 83 LT478_RS03450 853750 .. 853776 + -8.1 -2.78816 CGACCTCTTACGCCG GCCTGATCA CCAGCTCCC TGATCAGGC TGTCGTCGAGGCTGC 53 180 LT478_RS03510 NONE LT478_RS03515 863474 .. 863517 + -2.9 -3.92746 GAGCTACCGGCGGTT CTGCTCGCGGTAGCG-CGCG AGCGC CGCGTCGTAGCTGCCGGCCG TCTTTTTGAAGTAGA 54 62 LT478_RS03530 865178 .. 865194 + -4.4 -3.13853 GAGGTCATGCGAAGG GACGCGC GCTG GCG-GTC GTTTTGCGTCCTTAC 48 107 LT478_RS03535 866144 .. 866182 + -23.2 -3.14132 AAGCCGCCCGACGCG AAACCGCCCGCGATCCGT TCG ACGGATCGCGGGCGGTCC TTCGTGCGCGAGCGG 100 39 LT478_RS03565 872931 .. 872947 + -2.2 -3.87104 GCTTCGAGGTTTTTG CGGC TGTTTCGTT GCCG TTCTTCTCGTCTCCG 55 403 LT478_RS03575 NONE LT478_RS03580 882913 .. 882933 + -19.7 -4.45068 ATAAGTTCGACCTGG GGGGCGCGC TTG GCGCGCCCC TTTCTTGTTGCGGCT 100 37 LT478_RS03585 883732 .. 883746 + -4.2 -4.1711 GTTTTCCGCCGCTTC GAAAGC CCC GCTTAC TTTGTTGAACCTGCT 65 52 glmM 885219 .. 885273 + -15.9 -3.69702 AAGCGGGGACGCGAA GGATCCCG--TGCGGCGTCAGCAGGAA GTC TTTCTGCCGGTGCCGTATTCGGGATCC TTCTATTGCGTAGTG 93 134 LT478_RS03610 891860 .. 891878 + -16 -4.7458 TTTTTGCGAACATCG CGCCCCCA TCA TGGGGGCG TTTGTTTATTATGGT 100 277 srtB NONE purF NONE purM NONE purN NONE LT478_RS03635 NONE LT478_RS03640 897997 .. 898023 + -6.5 -2.56343 CGCTGACCTTTTCGT CGTGCGCGTTT GCGGG ATATGCGCGCG CTTCCTCGTTGACCT 49 35 purH 899724 .. 899751 + -21.4 -4.56597 CATACCATGTTGCAA GCGGCAGCTTCG GAAA CGAAGCTGCCGC TTTTTGCGGGCGCCC 100 50 LT478_RS03650 NONE LT478_RS03655 NONE LT478_RS03660 NONE LT478_RS03665 904994 .. 905018 + -2.8 -3.727 TCCAGCCTTCCTCCG CGGCCTCAAT GGTAA ATTGACGACG TTTCGGTGTGCTCCA 52 69 LT478_RS03670 906601 .. 906647 + -7.3 -3.36803 CCGGACAGAAGCGCA CGGCTAGACGGCGAGGAGTGACG TTT CGA-GCTC-TCGTCGTTTTGCCG TTCTGCGTCGCGTTG 56 56 LT478_RS03675 909712 .. 909729 + -10.5 -2.70932 GAAAAACCGCACGGA GGCCGCG ACGA TGCGGCC TCGTTAACGAAGGAG 61 102 LT478_RS03680 910433 .. 910453 + -9 -3.54475 CGCACTGTTTCGGTC CCGATGCGC GCGT GCGCA-CGG TTATCTCGTCGCCGG 62 285 LT478_RS03695 NONE LT478_RS03700 NONE LT478_RS03705 NONE LT478_RS03710 915465 .. 915505 + -18.3 -3.60792 AGTCGCCGCGCCTCG CAAGAACGGTCCTGCCGCA GCA TGCTGCAGGACCGTTCGCG TTTAGGAATTCGAAC 100 64 LT478_RS03730 NONE LT478_RS03735 924867 .. 924904 + -7.8 -3.09273 GCCCTCCCTCGTTCT CGATCCGGCG--GGCG-AG GTT CTACGCAAGCGCCGGATCG TCTCTGTTGCGCAGC 56 267 LT478_RS03745 NONE LT478_RS03750 927753 .. 927765 + -4.8 -3.14881 TATGCCGAAACAGCA CCTC CGCAA GAGG TTGGTGGCGCCGTTG 48 109 LT478_RS03755 929665 .. 929697 + -3.6 -3.21705 CGGTGAAGAAGGCGT GGAAAAAGAAAT ATTGTCGCA ATTTCTTTTACC TTCGGTTACATTGTG 45 480 LT478_RS03760 929832 .. 929853 + -11.6 -4.8048 CGACCAGAAATTGCA GGTCAGCC CTTCGC GGCTGACC TTTTTAATATGAGCA 100 35 LT478_RS03775 934401 .. 934417 + -8 -5.08824 ATTTGGTTGCTAAAG GGGATG GGGAA CATCCC TTTTTTGCATAGGCA 93 300 tatA 934785 .. 934822 + -19.3 -5.21709 ACATTCGTCTGGTTC GCGGTATGTGCAG-TCGC TCG GCGCTCTGCACATACCGC TTTTTTCATATCAGG 100 45 greA 935357 .. 935368 + -2.2 -2.53213 ATGACCATTCTCAAG CTGG AACA CTAG TGAGTTGCGCCGTTC 37 14 lysS 937527 .. 937557 + -19.8 -3.57561 TAATCGCTTCCGAAA GGCCGCTTGCGC ATATGCC GCGCAAGCGGCC TTTCCGCGGTTCGGA 100 53 LT478_RS03795 940431 .. 940473 + -22.3 -4.49353 TTCGCCTCTTAAGCG CCCCTGCTCCTC-GGCTT-GA AAT TCGAAGCCCGAGGAGCAGGGG TTTCTTGTGTTCTGC 100 43 LT478_RS03800 941544 .. 941559 + -3.2 -3.05384 GTGCGCCAGCCGGGC GAGCGT GACT AGGCTC TTCGATCGGCAAGCG 43 14 ispD 942511 .. 942558 + -17 -2.56596 CCAGTCGCTCAGACA GTCCTGCTCGCG-CGAAACGCCC GCT GGGCGTTTCGGCTCGTGCGGAAC TCGCTTGGTGGGCAC 83 69 ispF 943191 .. 943204 + -8.1 -2.53701 TCCAAGCCCTCCTCA CGTGC ATGA GCACG CTTCGTCGGTCTTTC 52 79 cysS 944900 .. 944920 + -16.1 -3.23216 TGGAACATTCTCGAA GGGCGGCCG CGT TGGCCGCCC TTCGTCGTCGTGCAC 85 59 LT478_RS03820 NONE LT478_RS03825 NONE LT478_RS03830 948013 .. 948042 + -23.6 -4.05446 AAAGCGTAACGACGA CGGGGGCGGCCG CGTGAA CGGCCGCCCCCG TTTCTCGTTCCGGCA 100 32 LT478_RS03840 951396 .. 951418 + -17.8 -5.88565 CCACCATATTTGCTA CGACGGATGC GAT GCATCCGTCG TTTTTTTATTGTGCA 100 35 LT478_RS03845 951970 .. 951993 + -18.2 -3.59979 TCCCGGCGTGAAAAA GCCTCTCCGG GGTT CCGGAGAGGC TTTCAACTGCGGGCG 100 45 LT478_RS03855 954450 .. 954481 + -15.2 -2.54325 CGGATGTTTATTTTG GTCCCGGTTCGTCCT TTT GGGACG-ACCGGGGC GTATCTTTCAGCCGC 76 153 modD 955876 .. 955920 + -6.5 -2.73007 CTTGCGCCGTGGATG TGCGGTCTTTGGGCTCGGCGG ATGCG CTGTC-ACCCCAAAG-CCGCG GTTTCGGGCAATATT 50 44 LT478_RS03870 NONE LT478_RS03875 958318 .. 958352 + -20.8 -3.96148 GCTGTTCCGAAATGA AGAAGCGGGCCCATCG CGA TGATGGGCCCGCTTCG TTTCTGCTGCGGCCG 100 41 LT478_RS03885 961159 .. 961193 + -18.6 -3.55563 TCGAGGGTTTGAGAG TGGAGGAGGGAGCCGC GGT GCGGCTCCCTTCTCGG TTTCGGGGGTGGGGT 100 61 LT478_RS03905 NONE LT478_RS03910 966555 .. 966567 + -2.6 -2.91144 GGACTTGCATCCGGT GCTG CAGCT CGGC TAGTTTCCGACCTGC 40 10 LT478_RS03915 967332 .. 967355 + -15.4 -5.26875 ATAAGCGGTTCGGAA TTCGGCATCG TTCG CGATGCCGAA TTTTTTGGTTACCCC 100 54 LT478_RS03920 968184 .. 968194 + -2.4 -2.77182 GGGGCTTTGCTGCAG GCCG ATT CGGA TGATTACCTGTAGGG 39 2 LT478_RS03925 968562 .. 968576 + -8.5 -3.84406 GTAAGGGTTCCGTTC GCCGG AAGTG CCGGC TTCTTATCATCAAAC 67 37 LT478_RS03930 NONE glmS 971295 .. 971305 + -4.6 -3.14132 AGTCCTCGCTGCGCT GCGG AAC TCGC TTGGTGGACGCCGCC 48 94 acpS 972001 .. 972033 + -13.4 -2.52896 GATCGTCCCGCGCGA GGCGCGCCGTTTCGA GAGT TCGCG-CGGCGCGCC TGCATTCGCGGGTCG 72 39 LT478_RS03945 974141 .. 974188 + -23.7 -3.55801 CCTGACCGTGCCAAA TCCCCCGTCCCTTTGACAC ACTCAGGACC GTGTCGAAGGGACGGGGGA TTTGGCACGCTTCCT 100 69 LT478_RS03955 975954 .. 975974 + -14 -3.65314 AAGAAAACAGGCGAA GGCCCCGA TCGTT TCGGGGCC TTCTTCCCGATTGCA 88 120 ligA 978150 .. 978173 + -8.8 -2.50113 CGCCCGGGCTCCGTC GCGCCCCGATG TTT CA-CGGGGAGC ATTGCTCGGATGCTC 56 43 LT478_RS03965 980414 .. 980467 + -9.7 -3.72051 GCTTGGTGGGCACCG CGGCGCCC-CTCCCGCTGAC-CGTAA CGAGC TTGCGCGTTGG-GGGACTGGGCGCCG TTTGCGCTTGTTGGA 71 116 LT478_RS03970 981600 .. 981612 + -10.5 -3.61178 CTGGCTCGCACGAAA CGCCC ACA GGGCG TTTCGGCTCGATGGG 73 112 LT478_RS03975 NONE LT478_RS03980 983681 .. 983691 + -2.4 -2.70932 GGCGGGTCGACGGAA GGGG GTT CCCA TGCTTGAGGCGCGCG 39 8 LT478_RS03985 984388 .. 984409 + -4.3 -3.15579 GAAGCCCGGGAGCGA TG-CGGCCCT CGC GGGGCCGGCC TTCGTCGCCGGTTCG 48 120 LT478_RS03990 985419 .. 985442 + -5.3 -3.64703 ATAGTGACAAGGAAA GGATGGG ATCGTACACG CCCATCC TTTCCGTGCGACAAG 57 59 modB 986974 .. 986993 + -7 -3.34517 GGAGTCGAGGGATCC CGCGCGGC GCAA GCCGAGTG TCTTTGGGAAGGAAT 56 75 LT478_RS04000 988259 .. 988275 + -2.9 -4.25074 CGCAAGAACTGCGAG CGCGT CTCGTCT GCGCG TTTTGCGGTTTCGTC 60 156 moaA 989679 .. 989694 + -9 -3.21416 CGATTCCGAGGAATC GCGTAC CGAA GTACGC TTCATCCTCGGAATC 61 111 moaC 990448 .. 990468 + -4.6 -4.65895 TTTATAGGTTTTCGC CGACCAGG CGTTT TCGGGTCG TTTTTACCTGAGAAG 73 167 aguA 992882 .. 992912 + -10.3 -2.78384 GAACCGTTTGCATCC ATGTGCGGGCCGC CCCGA GCGACCCGCACGC TCTCATGAAGGAGGA 61 51 ptcA NONE LT478_RS04030 995796 .. 995835 + -3.4 -3.73068 GGCGACGCCGACGAC GATGCCACCGAT-GGCGAC GGG GTCGCCCGTCCGGGCCAGC TTCTTCGCTTGCGGC 54 268 LT478_RS04045 1000683 .. 1000729 + -12.4 -2.94144 GCATCGCTATGAACC GCCTCCCGTTTCTTGGAC AAGGAAGCAAA GTTCGAGAGGCGGGAGGC TCCTTTACGTCGCCG 70 87 LT478_RS04095 NONE LT478_RS04100 NONE LT478_RS04105 1015801 .. 1015834 + -19 -4.76041 TCCTTCGTAATCGTT TGCGAGCGACAAGG CTTTGT CCTTGTCGCTCGCG TTTTTCGTCGCTCTC 100 88 rplB NONE rpsS NONE rplV NONE rpsC NONE rplP NONE rpmC NONE rpsQ NONE rplN NONE rplX 1019977 .. 1020004 + -14 -3.55444 GACTAGCACATGAAG GCGGCGCGGCGC TTCG GCGGCGCGCCCC TTTGAGCAATGACCC 86 35 rplE NONE LT478_RS04160 NONE rpsH NONE rplF NONE rplR NONE rpsE NONE rpmD 1023173 .. 1023203 + -21.2 -2.64274 GTAGGATATAATGAT TCGTCGGCGTGCCG CAA CGGCACGCCGATGG TCGATTTACGGAAGT 100 60 rplO NONE secY 1025026 .. 1025051 + -13.4 -5.7946 TCTGTCGAAGTAAAA GCCCTGATCA AGCGAC TGATCAGGGC TTTTTTTATTGCCCC 100 46 LT478_RS04200 1026496 .. 1026512 + -10.1 -4.20368 TGCGATCGAGTCGTT GACGGGC TCT GCCTGTC TTTCTGTTGAAATGC 84 76 LT478_RS04205 1027257 .. 1027287 + -13.2 -5.24989 GCACGCAATCTTGAA GGCGGACGGGGC TTGAGCT GCCTCGCCCGCC TTTTTTCATCTATAA 100 61 LT478_RS04210 NONE nagB NONE nagA 1031393 .. 1031406 + -4.5 -3.98826 GATCCTGCGAGGCGA GCTGC TGGG GTAGC TTTCTGCGTTCATCG 59 13 LT478_RS04225 1033285 .. 1033329 + -7.7 -4.36914 CGGGCACGTCGCCCG CTG-CGGCGACGGCCTCGCG CAGGAA CTCGAGGTCGGGGCCGGCGG TTTTCTCGCGGCCGC 78 244 LT478_RS04270 1043435 .. 1043450 + -6.1 -3.5882 CGCCCATCGTATTCG TCGCG CCGCAA CGCGA TTTCGGGCTGGTATC 57 188 nifJ 1047143 .. 1047170 + -19.9 -4.65895 ACACGATGAACGAAA GCCCCCGACGC GAACGA GCGTCGGGGGC TTTTTGCGTCCGAGA 100 55 LT478_RS04280 1047534 .. 1047567 + -3.8 -3.01924 AGCGCCTGCGTTCGA GGGGCATGATGTGA TATGGC TCGCATGAAGCTCC TGTTGGACACCAATG 43 12 LT478_RS04285 1048198 .. 1048210 + -3.3 -3.53012 GCTCATGCGCTACCA TGGGG GCA CCCGA TTTCAGAAGGAGCCG 49 210 LT478_RS04290 1053435 .. 1053450 + -11.8 -2.71144 CGAACAAGAAAAGGA GCCGCC CGAG GGCGGC TCCTTCCGAACGATC 65 99 LT478_RS04300 1055170 .. 1055204 + -4.7 -3.16742 ATCCTGCATGAGGCG GGGCGGCGGGGGGCG ATGAC CTGCCTCCGCCGCAA TTAGTCGCGCTTCGA 48 61 LT478_RS04305 1056895 .. 1056927 + -19.3 -4.15565 GTTGCACAACATCTA GAGGAGGCCACCA CAACACT TGGTGGCCTCCTC TTTTCCCGTCATGCC 100 55 LT478_RS04310 1058327 .. 1058346 + -15 -3.9093 TCATACGATCACTAA GGGAGGGC TTCG GCCCTCCC TTCTTCTATACTACG 93 45 LT478_RS04315 NONE LT478_RS04320 1059562 .. 1059605 + -9 -2.50816 TCCTAGCGTATTATT CT-CCTGCTCGCGC-GTTCGG GTTCA CCGAAAAGCGCG-GCAGGCAG CTTGATAAATACACA 56 144 LT478_RS04325 NONE LT478_RS04330 1059814 .. 1059831 + -2.7 -2.60244 CAGGCTCCATTTTTT GCTAC-CT GGC GGTGTAGC TCAGTTGGTTAGAGC 38 32 LT478_RS04335 1059903 .. 1059936 + -3 -5.22258 ACCGCTACCATTGTA TTATTTCGCGTCCG CTTTGT CGGACGCGTCGTTA TTTTGTTTTCGTTTC 83 31 tuf 1061197 .. 1061239 + -9.1 -3.35197 AACACCGTTTTAGCG TGATC-CG-GCGGGGCCCGCT CCA AGCGGGCCCCGCTCATGAAAA TTCATGTGTATGAGA 63 39 rpmG NONE LT478_RS04350 1061584 .. 1061603 + -10 -3.98804 AGGTTGCTTGGATGA GCAGCTTG TGAT CAGGCTGC TTGTTTGGCGTTTAC 78 67 secE NONE nusG 1062666 .. 1062683 + -4.8 -3.51329 CAAGCGGCGTCGCGT GCCCGCG TGGAC CG-GGGC TTCTCATTCGACCTA 52 52 rplK 1063285 .. 1063305 + -15.4 -3.67597 GACGTAGGGAATGAC CGGCCGCC GGAAA GGCGGCCG TTGTTCGATAGAACG 93 54 rplA 1064104 .. 1064129 + -16.3 -4.18018 ACGAGCGCGAACCAT GAAAAGGAGCC GAGA GGCTCCTTTTC TTTTGCATCAAGAAC 100 45 LT478_RS04375 1065309 .. 1065341 + -28.5 -3.05596 CCAGTAGGAAGGAAC GCTGCGGCGCGGCGC CAC GCGCCGTGCCGCAGC TTCGGTGGCAAGCTA 100 34 LT478_RS04380 1065550 .. 1065584 + -22.2 -2.60075 ACGCACGGGAGACGA AGAAGCGCCCGCGGAG TGA TTCCGCGGGCGCTTCC GTTCGTTCGGGCAGG 100 7 map 1068009 .. 1068028 + -5.6 -4.00532 GAACACGAGCAGGAC GCGTC-CGC TGT GCGCGTCGC TTTGATATTTCGCGG 64 142 asnB 1071851 .. 1071887 + -19.5 -3.64703 GACTGCGCGGGAATA TGCGAGCGCGCCCGGC CGACCA GCCGGGCGCG-TCGCG TTTCGGTGCGCGAAC 100 44 LT478_RS04410 NONE LT478_RS04415 1075642 .. 1075678 + -24.6 -2.83634 CCCGCTCCCTCCCTC CGC-AAAGCGGCCCGGC GATC GCCGGGCCGCTTTCGCG TGCTTCCTATCCTTT 100 56 LT478_RS04425 1079262 .. 1079290 + -16.7 -3.46602 GCCCAGTAAAAACGT GGGCGCGTCGGAG CGG TTCCGGCGTGCCC TTCTGCTGTCAGCGC 100 32 LT478_RS04440 1083346 .. 1083398 + -30.9 -2.52464 GGCAGTCGCAACCCA TCATCGCCCGAAAAACGCGCTCCAG CCG CTGAGGCGTGTTTTTCGGGCGATGA TGGGTTGCGGCCCGG 100 61 LT478_RS04450 1085105 .. 1085118 + -5.3 -4.49756 TCGCCCGTGGCGTAT CTTAG CTAA CTAAG TTTTCGTGTTTACGA 74 168 LT478_RS04455 NONE LT478_RS04460 NONE LT478_RS04465 1088527 .. 1088565 + -12.4 -3.81951 GACGAGGTTGCCGCC TTGCGCGAGCCCGATGC GAACCA GC-TCGGGCTCGCGCCC TTTGATGATGTCGCG 81 500 LT478_RS04485 1093967 .. 1094016 + -25.1 -2.89668 ACCCCTCCCTCTCCG GTGCAAGGGCCGGGC-ACGCGC TCTCGAT GCGCGGCGCCCGGCCCTTGCGC TGTCTGCGCCTCTTG 100 89 LT478_RS04490 1095933 .. 1095970 + -9.1 -4.07568 AGAGGGTTCGGCAGA CGGGGCGCGGATGTTTC ACGT GAAACATCCGTTCGACG TTTTGCGGCGGCGCG 76 122 LT478_RS04495 1096892 .. 1096917 + -7.6 -3.56092 CCATCCCCGCGCGAA GTAGGGAGGCG CTCTT CGTCTCCC-AC TTTGCCCCCTGCTGA 62 22 LT478_RS04500 NONE rsmH NONE LT478_RS04510 NONE LT478_RS04515 NONE LT478_RS04520 NONE LT478_RS04525 NONE mraY NONE murD NONE LT478_RS04540 1108002 .. 1108016 + -4.2 -3.90744 AGGGGCAGGAGGTAG CGAACA TGC TGATCG TTCTTTCCGGCGGCG 59 26 murG NONE murC NONE murB NONE LT478_RS04560 1112858 .. 1112903 + -31.4 -4.09685 TCGAAGGATCTCGTG C-GGCGGTTCGGGGGTTCCCG GCAGG CGGGAACCCCCGAACCGCCTG TTTTACAGCATGCGC 100 326 ftsZ NONE LT478_RS04595 NONE LT478_RS04600 NONE LT478_RS04605 1122684 .. 1122710 + -11.5 -3.30124 CCGTATTCGATTCTT CGCCGGCGCGGC TGCC GCCGC-CCGACG TTCTAAGGAGTAGAA 72 43 LT478_RS04610 1122967 .. 1122980 + -3.9 -4.26327 TACAATTTGGAGTAC GTTTA CTGA TAAAC TTGTTTTAATGCGTA 62 3 LT478_RS04615 1123878 .. 1123899 + -17.3 -6.34424 GCATGGACGACGAAA CGCGCTCCC GCCC GGGAGCGCG TTTTTTTTTTCGCCG 100 65 LT478_RS04620 NONE nirJ2 NONE LT478_RS04630 NONE LT478_RS04635 1128300 .. 1128321 + -6.5 -4.13767 CGGCAAGGAACCGTT CATCGGGGG GCTT TCCGCGATG TTTTCGCATGGGGCG 68 260 LT478_RS04640 1129106 .. 1129150 + -20.2 -3.48276 TGGCAGAAAACGCGG GGCATTGGTCGCAGATTCCTC GTAT GCGGAATCTGCGACCAG-GCC TTATGTGCCCGCGCA 100 114 LT478_RS04660 NONE LT478_RS04665 NONE hemA NONE hemC NONE cobA NONE ahbC NONE hemB NONE LT478_RS04695 NONE hemL 1141602 .. 1141619 + -3.3 -3.35542 CCCGGAAGGTCGCCC GCCGCGT GCGG ATCCGGC CTTTTTCGCGATACG 47 45 LT478_RS04705 1141720 .. 1141742 + -14.1 -3.60098 CACCAGCCTCGCACC GTCCCGGGC AACGC GCCCGGGGC TTTCGCATGCGCACT 88 36 thiC NONE thiM NONE thiE NONE thiD 1145808 .. 1145828 + -7.6 -3.2699 CGCACGTCCCGCCCA TGAAGGTG GCCAG CACCTTCG TCTTCTGGATGTCGT 57 258 LT478_RS04760 1153350 .. 1153361 + -3.6 -3.01924 TGGCCCCGTTGCGAG GGTC GCCT GGCC TCTTCGCCCCCGCTG 43 114 LT478_RS04765 1156481 .. 1156493 + -3.3 -3.34043 TTCTTCCAGTACATG CACGA CCC TCGGG TTGTGCGATCGTGAA 47 33 rrf 1156695 .. 1156711 + -7.9 -3.57144 GGGAGGATAGGGCGT CGCGCTC GCG GAGGGCG TTTCGGCATGCGGAG 64 18 LT478_RS04775 1159191 .. 1159229 + -17.6 -2.53263 GCCTGCATAACGAGA CAGGGCTTCC-GCACGT ATGAAA GCGTGCTGGAAGCCCTG TGGGTTGCGCATACA 83 50 LT478_RS04805 NONE LT478_RS04810 NONE LT478_RS04815 1165902 .. 1165921 + -4.2 -4.32201 TCGCGCCGATCGTTT CTGCTAGC GACA GTTGGCGG TTTTGCCTTGCTTGC 68 291 LT478_RS04820 NONE LT478_RS04825 NONE LT478_RS04830 NONE LT478_RS04835 1170351 .. 1170364 + -3.1 -3.15364 TGTACATTCTTGATG CTCTGC AAT GC-GAG TGGTTTTGCTCGTCT 45 145 LT478_RS04840 1172035 .. 1172046 + -2.2 -3.61075 GAGCGGCTCGGGCTC GACG GTTT TGTC TTGGTTTGCTGTATT 49 50 LT478_RS04845 1174518 .. 1174533 + -4.6 -3.54516 CAGGCGTTATTCTTG CGCGAT AGGG AGCGCG TCTTTCATGCTTTTC 52 48 rfbA NONE rfbD NONE rfbB NONE rfbC 1178369 .. 1178402 + -7.3 -3.6959 TGCGTTGCTTTGCGT GGCACGGACGAGCGG TCGG TCGATCGTTTGCGCC TTTCGCTGGTCATGT 60 362 LT478_RS04870 1180656 .. 1180672 + -2.2 -4.79223 GGTCGTAGGTGCGCG GGTCGA AGAAC TCGGTC TTTTTCATCGTGTCG 74 231 LT478_RS04890 NONE LT478_RS04895 NONE LT478_RS04900 1188645 .. 1188657 + -4.7 -4.09685 TGACGATCCGCTTTG CGGCG TTT CGCCC TTTTCGGGACTGCAA 61 57 LT478_RS04905 NONE LT478_RS04910 1190921 .. 1190933 + -3.4 -4.42851 TCCCACTCGTAGAGG CGAT GGCGA ATCG TTTTAGATTTGTTGC 65 29 LT478_RS04915 NONE LT478_RS04920 NONE LT478_RS04925 NONE tagD NONE LT478_RS04935 1195940 .. 1195957 + -3.3 -3.17794 AAAAACCTCGTCGGA GGGATCG GTAT CGGTGCC TGTTAATGCTGGCTT 45 362 LT478_RS04950 1203698 .. 1203738 + -7.7 -3.35679 AAAACGAACGACTGC TAGAACCCTTCGAGTCGT CATCAA GCGA-TCGGGGGGTTCTG TTGTGGATCGGGCAC 59 81 LT478_RS04955 NONE LT478_RS04960 1206297 .. 1206313 + -4.4 -2.71144 GCCCTGCCTTGTCGA CTCAAG GAGCG CTTGGG TCGTTAGGCGCACTG 43 2 LT478_RS04965 1207342 .. 1207369 + -14.2 -4.42464 GCCATTTAGTATGCA AGAAGACCCCGA ATGC TCGGGGTCTTCC TTTATTTCCCGCCTT 100 41 LT478_RS04980 1213923 .. 1213948 + -18.3 -4.68124 ATCGCAGTATCAAGG CGCGCTCTCCG AGAA CGGGGAGCGCG TTTTCTATGTGTTCA 100 62 LT478_RS04985 NONE LT478_RS04990 1217323 .. 1217368 + -15.6 -2.62184 GAGGGGCGTGCGCGT CGGGTCGGCAGGGGTCACGTT AGCCG AACGTTACTTCT-CCGACCCG TCCTCTACGAAGACG 78 514 LT478_RS05020 1222671 .. 1222684 + -5.2 -2.63596 GCAGTGGGAGCGCGA CCGC TATCTC GCGG TGCTGTGACGTGCGA 43 4 LT478_RS05025 1223618 .. 1223632 + -11.4 -3.53012 ACCCATCGAGCCAAA CAGCCC AGT GGGCTG TTTGCGCGAGCAGGA 74 258 polA NONE rplU NONE rpmA 1227365 .. 1227387 + -14.9 -4.80882 TTATCTGTTTTCGCA TGCCCCCTG CTCGT CAGGGGGCA TTTTTCATATACAAT 100 69 obgE NONE proB 1229992 .. 1230005 + -3.8 -3.05844 GCCGCTCGTCCATCG CGAC GAGTTG GTCG TCTTCGAATAGGGGG 43 1 LT478_RS05055 NONE nadD NONE yqeK NONE rsfS 1233057 .. 1233079 + -17.7 -5.99154 CTTTGATGCGTCCTG CGCCGCCGC CTTCC GCGGCGGCG TTTTTTTGTTTCGTC 100 57 LT478_RS05085 1238165 .. 1238179 + -2.2 -2.63326 AGATTGCGAAAAAGG TATATT ATG GATATA ATTACTATATCTTTA 38 67 LT478_RS05090 NONE LT478_RS05095 1238762 .. 1238784 + -10.4 -3.07443 TTGCGTTCCCGATCC GCCGCTGCGC CTC GCGCCGCGCC TTGCGTGCCCTGTGA 64 79 secA NONE prfB 1242933 .. 1242949 + -2.2 -3.8579 AGGCAACCTGCACCA CCACAG CCAAC CTGTTG TTTACATTGTTGAGT 54 149 LT478_RS05110 NONE LT478_RS05115 1244906 .. 1244925 + -4.2 -3.92869 CCACGCGGCGCCCGC GCGGCAGAC CAC GTC-GCAGC TTTCTGCGTCGCTGC 59 152 ftsE NONE ftsX NONE LT478_RS05130 NONE LT478_RS05135 NONE LT478_RS05140 1250780 .. 1250793 + -3.1 -2.91912 GCACCGCCCGACGAT GTCGA AACT TTGAC TATCTAACTACATAC 42 5 LT478_RS05145 1251524 .. 1251536 + -4.7 -3.05963 GCAGAAATCGTGGAG GGCGC ATG GCGGC TCTTGCAATCGGAGT 46 224 LT478_RS05150 1251859 .. 1251905 + -17.9 -2.52464 TAACGCGCGTTGATC GGGCCCCGTACGGGGCCCG CTTGTATGA CGGGGCCCGAACGGGGCCG TGGGTTCGAGGAAGA 85 38 LT478_RS05155 NONE fabD NONE fabG NONE fabF NONE fabZ NONE LT478_RS05180 1259121 .. 1259171 + -17.8 -4.17491 GCAGAGCCGTTCATT TCGTTCGAGCGCC---CGGGGACGC GCAT GCGTTCCCGTATGGCGCTCGAACGG TTTTCAACGTTTCCT 100 63 LT478_RS05185 1262105 .. 1262130 + -13.3 -3.03771 CGGCGAGGTCGGTCT TCGCATCCTGC AAAT GCAGGATGCGC TCTTCGACGGTGTCC 71 169 LT478_RS05195 1266657 .. 1266685 + -2.1 -3.8647 TTCTAGTGTTCGCGC GCACGCGCTAACG CAG CGGAGTCGCGGGC TTTGCTATACTGGGT 54 15 LT478_RS05200 1267898 .. 1267912 + -7.1 -3.41527 TCGTCGAGGTCCATC CAGCG CACGC CGCTG TTCTCGTCGGGCTTG 55 134 LT478_RS05210 NONE cas3 1270801 .. 1270858 + -20.7 -3.53174 CGAAGAAGGAAAGGG GATATTCCTGTAACGGCACAGGGGCGCT TGG AGCGCCCCTGTGCCGTTACCGCT-TAAC TGTTTATGAGAATGT 100 13 LT478_RS05220 1271424 .. 1271440 + -4.3 -2.52464 AGATCGTCGTCAAGG TGCTCGT GTA GCGCGCA TGGATTCCCGGGCAG 42 15 LT478_RS05225 NONE LT478_RS05230 1272545 .. 1272578 + -7.4 -3.28712 CAAGAAGCCGTAGGC GGGGT-CGCGGAACCA GCGG TGGG-CCGCGTGCCCC TTGTCGACGCCGCGC 57 208 LT478_RS05240 1275208 .. 1275229 + -7.1 -2.53715 CTGGTAGGCCCGCAA CGCCCGCCG TCGG CGCCGGACG CTTCATGGTACTCCG 48 34 LT478_RS05245 NONE smpB NONE LT478_RS05255 1277897 .. 1277928 + -19.5 -3.25896 CCTAGGAAACGCAAA GGAGCCCCG-CGGC TGCGC GCCGACGGGGCTCC TGTTGTCAGTGGTGG 100 51 LT478_RS05325 1291339 .. 1291361 + -14.1 -4.7254 TCCGATCCTACGCAA CGGGCTCGC ATCGA GCGGGCCCG TTTTTCGTCGCGAAT 100 49 murI NONE rdgB 1294190 .. 1294217 + -3.4 -4.07568 GCGAGCGGTGAGGCT GCGT-CGGCAATG TTA CGTTGATGCACGC TTTTGACAAGCGAAA 59 30 LT478_RS05350 1295492 .. 1295504 + -3.3 -4.38154 GTTGCGTGAATTGCT GCTTG ATG CACGC TTTTGTCAACCATCT 65 64 LT478_RS05360 1296717 .. 1296736 + -10 -2.54634 ATGAACACCTTGCCG GTGCGCTT CGCC AGGCGCAC GTTGCTCGTGTAGCG 58 256 LT478_RS05370 1299123 .. 1299147 + -17.2 -4.86731 CTCCACGAATTTGCA GGCCGTGCAC CCAGT GTGCACGGCC TTTTCTTTGCCGGCC 100 35 arcA 1301825 .. 1301838 + -2.3 -5.31091 GGAAACTTGGCTCTA TCCGC CGGT GCGTA TTTTGTTTTGTTCTG 85 154 argF NONE arcC 1303883 .. 1303914 + -2.8 -3.54424 GAGCGGAAGGCTTCC CCCA-GCTTCCGCAC GAT GGGCGGTGGCATGCG TTTCGGCGCATGCCA 47 56 LT478_RS05400 1305692 .. 1305717 + -16.9 -4.62069 ACCGACGCGTTTCGA GGATCCCCTGC TTCG GCGGGGGATCC TTTTTCGCGTGCGGG 100 70 argS 1308230 .. 1308248 + -17.4 -5.3236 TTTCGTTCGAAGGAA GGCCGCCC GAT GGGCGGCC TTTTTTATACGTTGT 100 42 LT478_RS05425 1312226 .. 1312279 + -8 -2.78384 TCGTGCATCCCTGCT CGTTGTGCAGCCGCGCGTTGGAGA TGGCGT TCTCCACCGCGCGCGTGAGCAGCC TCTCGTCCCCCAGCA 51 325 LT478_RS05440 NONE LT478_RS05445 NONE LT478_RS05450 1317556 .. 1317583 + -6.9 -4.14392 GGCGAAATCGTAGAG CACGGGCGTCC AAACGG GGACGGCCGTA TTTTCAAGGTTGCGC 68 351 LT478_RS05475 1322250 .. 1322266 + -3.6 -3.36289 CATCCCGGCTCGTGA CGGTCG GGCAA CAACCG TTCGTTGAAGTCGTG 47 259 LT478_RS05480 1322941 .. 1322966 + -16.2 -3.61398 CAACGCGTGCAAGAA GAAGGGCGGC CCTGGA GCCGCCCTTC TTCTTGCAGAGGAAC 93 41 LT478_RS05490 1324950 .. 1324963 + -5.2 -3.18507 TCGTAGTCCAGCAAG CGCG CCAGCT CGCG TTCCTGCAATATGTT 49 505 tig NONE LT478_RS05510 NONE clpX 1329763 .. 1329794 + -10.7 -4.35524 GGATACGGTAAACGA GCGGGCGGATCGC GGACGA GCGGCGCGCCCGC TTTTCGGTTTGAGAG 87 51 LT478_RS05520 NONE LT478_RS05525 1333425 .. 1333447 + -2.5 -3.68366 GAGCGCTAGGGCGTG CGGAGCGCC GTCGA GGTGCGCGG TTGATTTTGCGATCC 49 32 LT478_RS05530 1333749 .. 1333763 + -4.2 -3.21199 GATTTGTCGGTGAAC CGCG TGTAATC CGCG TTGGATTCGTAGGTG 48 17 LT478_RS05535 NONE LT478_RS05540 1335163 .. 1335175 + -6.2 -5.27938 GTTAAGGGAGGGAAG GGCG CTCGT CGCC TTTTTCTTTCGCCGT 90 517 loaP 1335959 .. 1335973 + -3.5 -2.84687 CGGGGGGGGGGGTGC TGACC GCAAG GGTCG TGTGCTGGTGGTTGA 42 56 LT478_RS05555 NONE LT478_RS05560 NONE LT478_RS05565 NONE LT478_RS05570 NONE LT478_RS05575 NONE LT478_RS05580 NONE LT478_RS05585 1344647 .. 1344660 + -3.1 -2.64794 AAGAGTAAAGAGGAT CGTTT TGGG AGACG TACTATGAACTTAGA 40 4 LT478_RS05590 NONE LT478_RS05595 1346719 .. 1346740 + -2.1 -3.81287 AATAGTGCTTTTAAT CCTCGGCTT TTCG ACGCTGCGG TTTGCTGGTAGTCTG 52 465 LT478_RS05600 1347329 .. 1347350 + -4.3 -3.80625 GGCGCTTCTCCGGCA CCGCGCG TCCGCCTC CGCACGG TTTCGCTTGTCGAGG 57 364 LT478_RS05605 1348354 .. 1348393 + -16.6 -4.36914 AACCACTTCGCAATG CAATCGAAGCCGCCTCG CGAACAA CGGGGCGGCTTCG-TTG TTTTGTCGCAAAGGC 100 39 thrS 1350421 .. 1350455 + -20.8 -4.62471 CCCCATCCTCCGCGT GACAGCGACCTCGGCA GCG TGCCGGGGTCGCTTTC TTTTTCACGGTTGCG 100 50 LT478_RS05615 NONE LT478_RS05620 1351443 .. 1351489 + -19.5 -2.73364 CGCGGAGTCGAAGGA TCCCATGCGGCGACAGCGG AAAGCGCCA CGGCTGGCGCCGCATGGGA TCCTTCGCGTCCCCG 88 81 LT478_RS05630 1353188 .. 1353204 + -7.2 -3.27022 AGCCCCAACTGGGGC GCGCGG GACGG CTGCGC TTGGTGTACCATACG 54 39 LT478_RS05635 NONE panF 1355371 .. 1355391 + -8.9 -3.21099 GCGCTTGCGGGCCGA GCGACGTTG CAG CAGCGCCGC TTGCTCCTCCCAGGA 59 331 LT478_RS05650 NONE LT478_RS05655 1358432 .. 1358445 + -3.7 -4.16016 ACGCTATGCACGATT CGCCG CCAT CGCCG TTTCTTCCGACCTGG 62 324 trxA 1360709 .. 1360730 + -13.7 -5.00616 GCCTGAGGCGGCGAA GCCCTCTCC GCTC GGAGGGGGC TTTTTTGCGCCCGCA 100 52 LT478_RS05675 1363116 .. 1363128 + -9.1 -3.16564 GTAGGGCACGAAGCG CAGCG CTG CGCTG TTGATGCAGTAGCGC 60 117 trxB 1365481 .. 1365508 + -16.3 -3.61398 CAGTTACAGCATAGG CGCCCGCTCCG CATGCT TGGAGCGGGCG TTCTTGGCGCGCGGG 93 80 prfA 1366707 .. 1366728 + -9.5 -4.84642 TCGCATTCTCTAAAA CCTGTAACA TTTT TGTTGCAGG TTTTATTGATTTGCA 100 92 LT478_RS05695 NONE LT478_RS05700 NONE LT478_RS05705 1370345 .. 1370390 + -11.7 -2.78384 GAACCCGCCGAGATC GCTG-CTGCGAGCGTCCGTCCG TCC CGGACGCTCGCGCGTGGACGGC TATAATAGGACGAAA 65 406 LT478_RS05710 1371562 .. 1371578 + -5.7 -2.6063 CCGCACGTTCCCATG CCCGATG CCA CGGCGGG TCCGTTCTGGCTCAG 45 328 LT478_RS05720 1373605 .. 1373619 + -7.1 -2.66316 CGGCGATGATCGTGA GCACG CCGGC CGTGC TGATCTGCTCGAAGG 48 150 LT478_RS05745 1377794 .. 1377804 + -2.4 -2.77182 CGGATAGGCGCCGAC GGCG AAA CCCC TCCTTCGATCTCCCC 39 85 loaP NONE LT478_RS05755 1379310 .. 1379340 + -4.1 -3.53563 TTCGGGGCGGTGTGC GCATAGTGGCCAGGA AGG TTTTGGCC-CTA-GC TTTCAGGAACGCTAT 49 20 LT478_RS05760 1380198 .. 1380213 + -3.2 -2.73701 GGAGGGGCAAGTAAT GCAACC TTCC GCTTGC GTTCGTTTGATCGAA 41 27 LT478_RS05765 NONE LT478_RS05770 1382846 .. 1382856 + -4 -2.60194 GACGGTGAGAACGTC TACA AGC TGTA ATTCATTAAAGAGAT 40 14 wecB NONE LT478_RS05780 NONE LT478_RS05785 NONE LT478_RS05790 NONE LT478_RS05795 1388994 .. 1389005 + -5.8 -2.87931 TTGGCATAAACTCAA GCCT TTCG AGGC TATATGAGACGTAGA 48 90 LT478_RS05800 NONE LT478_RS05805 NONE LT478_RS05810 NONE LT478_RS05815 1394994 .. 1395004 + -5.4 -3.42338 CTAAAAGCCATCTGG GCAA TAG TTGC TGTTTGGAATTCGTT 55 45 LT478_RS05820 1396041 .. 1396067 + -18.1 -4.36433 TCTAGTGTTTACTTG CCCCGCAACTC AAGCC GAGTTGCGGGG TTTCTTGGTCTTTGG 100 237 LT478_RS05825 NONE LT478_RS05830 1397156 .. 1397195 + -6.3 -4.25104 CGAGGGCATCCTCAG AGCCTCCTGGCGCACGT ACAAGC ACGTGCAAAAGGAGGCC TTTTCATGCCCAAAA 68 196 LT478_RS05835 NONE LT478_RS05840 NONE LT478_RS05845 NONE LT478_RS05850 1403393 .. 1403407 + -12.8 -3.17212 AAGTTCTCGGCGAGG GCGCGC ACG GCGCGC TTCGTGGACTCCTCA 72 435 LT478_RS05865 1405429 .. 1405440 + -5.8 -3.04144 TTTCGCGGGGGCGAT CCGT CGTG ACGG TGTTCCGCGTCGAGA 49 17 LT478_RS05870 NONE LT478_RS05875 NONE LT478_RS05880 1407439 .. 1407453 + -2.7 -3.01712 CAGGGAGAGGGCCCA GGGCC GATGA GGCGC TATTCGAAAGAAGGC 41 16 LT478_RS05885 1409295 .. 1409309 + -2.7 -3.21099 CCTGCAGGAGAGGAG GCGGC GGGAG GCGGC TTCCTCCTAGAACCG 43 1 LT478_RS05890 1409579 .. 1409614 + -5.4 -3.51924 TCGGCCAGCTGGACA CCT-CGTGGATGCCC AACTAGG GGGCGCCCATGCAGG TTGTCTACGTGCACA 55 6 LT478_RS05895 NONE LT478_RS05900 1412838 .. 1412861 + -5.1 -3.14344 GGGTTCGCCGGCAGG GCCGGGAGC ATCATC GCGGCCGGC TTCGTCGGGGAGCTC 48 225 LT478_RS05915 1415077 .. 1415129 + -9.3 -3.28924 TTGAGAGAATCGGAC GGGCG-GC-GCCTGCGCAGCG-GAG GTTCCTG CTCTCGCT-CGCGGGCAGCGCGCTC TTCTGCGCGGCGATG 63 54 LT478_RS05920 1416113 .. 1416138 + -21.9 -5.00616 ACACAGAGAAGCCAA GGGCGGCACGG ACTC CCGTGCCGCCC TTTTTTCGGCGCGCC 100 73 LT478_RS05925 NONE LT478_RS05930 1419937 .. 1419953 + -15.1 -3.35371 GCCCGAAAGCAGGAA GGCGGCC TCG GGCCGCC TTCCTTGCGGATATG 86 52 LT478_RS05935 NONE LT478_RS05940 1422301 .. 1422333 + -7 -3.14132 GCGACGGCCTTGGCG TTGGTGC-CGGCGCCC ATG GGGC-CCGAGTACCAC TTCATGCACGCCAGC 51 332 LT478_RS05980 NONE LT478_RS05985 NONE istA 1433463 .. 1433495 + -17.9 -4.55118 CGCTGATGCGAAGAA TCGTCCCATTGGG AATCTGC CCCAATGGGACGA TTTTCTATCCGATTC 100 189 LT478_RS05995 1434327 .. 1434353 + -5.1 -5.60993 CCCTTCCTTCTGAGG TCCTGGTGCAG CTTGC TTGCAGCGGGA TTTTTTTATGCCACG 95 278 ilvD NONE ilvB NONE ilvN NONE ilvC 1439580 .. 1439605 + -20.5 -3.59979 ACGGCTTCGCACAAA GAAGGGGCCCG ACGT CGGGCCCCTTC TTTCACGTGCGGGAA 100 103 serA 1441950 .. 1441970 + -5.3 -2.67055 GCTGTAGCGGCGGCG CGATGTTCG GCC CGCTCATCG TCATCTACCTGTTCT 46 34 nrfD 1442925 .. 1442938 + -4.5 -3.28924 GTCGTCGTTTCGTGC TTGCG AATG CGCGA TTCTCGCCGGCGATG 49 135 LT478_RS06035 NONE LT478_RS06040 1444794 .. 1444840 + -18.7 -4.08692 AAGGCGTTGCTCCCG CAAGGCGAAGGTCGCAAGGGC ATCCC GCTCTCGCGACCTTCGCCGCG TTTTCCGCACCGTTC 100 450 LT478_RS06045 NONE nrfD 1449293 .. 1449325 + -20.7 -4.62069 ACGCTGCGGCATCAC GGCTCGGCAAGCG ATCCCCG CGCTTGCCGAGCC TTTTTCGGGTCAGGC 100 64 LT478_RS06060 1451009 .. 1451042 + -21.7 -4.07568 CGCGAAGCGAACCGG CAGCGGCGGCCCGTC TTCG GACGGGCCGCCGTCG TTTTCGGGAGGGGGC 100 43 LT478_RS06065 1451755 .. 1451774 + -7 -3.04144 GGAGCCGAAGGAGCT CGTGCGGC GCTA GCCGCGAG TCTTCCCGCTAGCGC 52 85 LT478_RS06075 1455025 .. 1455036 + -5.8 -3.63627 GCATAAGGGTTCAAA CACG CTTG CGTG TTTCGAATATAGGGA 57 132 LT478_RS06080 1456282 .. 1456303 + -18.7 -4.24948 ACAAGCAAGAAAGAA CGCCCCGGC TTCG GCCGGGGCG TTTTGCGTGTCGTCC 100 53 LT478_RS06090 NONE LT478_RS06095 NONE LT478_RS06100 NONE LT478_RS06105 NONE LT478_RS06110 NONE LT478_RS06115 1464351 .. 1464372 + -18.7 -3.66286 CTCTGCATGCGAGAA GGCCGGGGC GCTT GCCCCGGCC TTCTTCGGATCGTCT 100 113 LT478_RS06125 1467505 .. 1467522 + -8.3 -4.07568 CTGTAAGGTGCACGG CGCGCGC ACGC GCCCGCG TTTTGGCGCCCCCGG 71 35 LT478_RS06130 1468250 .. 1468274 + -15.8 -4.11216 CCCGGCGCAAAAAAA GAACCGCAGC AATCC GCTGCGGTTC TTTTGGCGGTCGGAG 100 74 LT478_RS06140 1471132 .. 1471168 + -18.1 -5.07107 CGCAAGCGAGGTTTG CAGGGATGCCTGCCG CATACGT CGGCAGGCATCCCTC TTTTTTCGCGGTTTG 100 58 LT478_RS06145 1472722 .. 1472762 + -15.4 -3.38991 CTAGAACAGCTCTTC GGCTTGATCGGGGGCCCGC TGCG GCGAGCCCCCGA-CGAGCG TCTTCTTCAACCGGT 89 54 LT478_RS06150 1473726 .. 1473783 + -11.1 -2.79004 GGCCTGATCGGGCGG AGGGGACGTCGCTTAGCGCGTG-ACGGC CTC GCGGTGCACGCTCTGCGCGACGAGCCCG ATCTTTTCGACGTAG 65 3 LT478_RS06190 1481703 .. 1481727 + -16.4 -3.66178 CTTCTTGACGACGAA CGGCTCCGGC CTCCT GCCGGGGCCG TTTCGGCTTCGCCCG 93 72 LT478_RS06195 1483543 .. 1483560 + -14.1 -3.35679 CATGACGAACGCGAA GCGCCCC GATC GGGGCGC TTCTGCATGCAGAGC 81 73 LT478_RS06205 1486666 .. 1486721 + -11.1 -3.61715 CAAGGCGTAACGCGC CGCCAGCGAG-CGCGGGGGCGC-GC CGCTGCAA GCAGCGTCCCCGCGTCTCGATCCCG TTGTTCCACCGGATC 77 31 aes NONE caiA 1489101 .. 1489116 + -5.4 -3.29511 GGCCTATCGGCCGTG TCCGAA TGAC TTCGGG TTCTGAACCGCTAGC 52 126 caiB 1490388 .. 1490412 + -4.2 -3.53012 TGAAGATCGGCTAAC GCGGTACCTCG CGCC CG-GGAATCGC TTTCCGGGCGCCACG 52 27 caiC NONE LT478_RS06230 NONE LT478_RS06235 1495068 .. 1495112 + -10.5 -3.69836 GCGGTTGGACGCCGT CGGAGCGAACGCAACCAGGCG AAA CCCCTGGTCGCGACTTCTCCG TTTCGCATTCCTTGT 73 412 LT478_RS06245 1497884 .. 1497905 + -17.3 -3.53012 TGGAAAAAGCGAAAA CCCCCGGAC GCGA GTCCGGGGG TTTCAAGGACGAAAG 100 137 fixA NONE LT478_RS06260 1501161 .. 1501173 + -3.3 -3.23853 AACCGCGGGATGCTC CGAAC CGG GATCG TGTTCGTTCGGGGCG 45 275 LT478_RS06265 NONE LT478_RS06270 1502876 .. 1502907 + -21 -4.25283 TTTGCAAGGTATTCG CGACCCCGATGATC GAAA GATCGTCGGGGTCG TTTTCATGCCGCCGT 100 65 LT478_RS06275 1503608 .. 1503644 + -18.2 -3.06796 CCGGGTCGGTCCAGA GGCCCTTCCATCCTGTG AGAG CG-AGGATGGAAGGGCC TTCGGTCGCATGCGG 89 66 LT478_RS06280 NONE LT478_RS06285 1506294 .. 1506312 + -3.1 -3.01924 GTATGTTATTATTCT CGT-CGCA TATT TGCGGGCG TGTTCCCGCAACCTA 43 227 LT478_RS06290 NONE LT478_RS06295 1512834 .. 1512859 + -15.4 -4.67982 CATCGCTTTCCCCTG CGCGCCCGGC TTGCTC GTCGGGCGCG TTTTCTTGCGTCCCG 100 240 LT478_RS06305 1515890 .. 1515913 + -8.9 -4.55295 ACTTTCGACACACGA GAAAGTGGG CTTGTT CCCGCTTTC TTTGTTTGTAAGGGC 84 272 LT478_RS06310 NONE nusA NONE LT478_RS06320 NONE infB 1520919 .. 1520966 + -22.8 -4.08216 TTAGTGGGCACCACC CCGCAACGCCGCTATGGCAACC TTGT GGTTACCGTGGCGGCGTTGCGC TTTTCGGGGAAATCG 100 145 rbfA NONE LT478_RS06335 NONE truB 1523548 .. 1523561 + -2.4 -2.89564 TTTCAAACGGGGGTG TCTC GTGGCA GAGA TATATAAGGTCGACG 40 5 ribF 1524827 .. 1524846 + -5.6 -2.79183 TGTAGCGCTCCTGCA CGGCCTCG AGCC CCAGGTCG TCTGCTGCAGCTCCG 47 377 LT478_RS06355 1528964 .. 1529002 + -16.7 -3.51161 CTTGCACGATGCGCA TGATTCGGAGGCCCCGGC GATC GCCGGGGCCTCCGTG-CG TTGTGTGCCGATTTG 100 49 LT478_RS06360 NONE LT478_RS06365 1532112 .. 1532138 + -13.6 -3.53224 GCATGGCAAAAAGAA CGGGCCCCGTCC TGA GGACGAGACCCG TTTCCGCGCGCGATG 86 72 LT478_RS06375 1535300 .. 1535348 + -7.8 -4.25104 ACGCGCGGCCGTAAT TCGTC-TATATCGTGAAAATATG CTAG TATATTTTCACGATATAAGGAGG TTTTCATGGCGACAC 75 27 LT478_RS06380 NONE LT478_RS06385 NONE LT478_RS06390 NONE LT478_RS06395 1539154 .. 1539184 + -19.8 -3.61398 CGCAAGGTTCTGCGT CGCGTTGCCCGC AACGACC GCGGGCAACGCG TTCTTGCGCGCGACG 100 426 dltA NONE dltB NONE dltC NONE dltD NONE LT478_RS06425 NONE LT478_RS06430 NONE LT478_RS06435 1546643 .. 1546674 + -3.6 -4.15222 GTAGGGAGCGGCGGT TTTTTCGTGCGCCG AATG CTTCGCGCGAAACA TTTGTTCGGGAACAT 62 37 LT478_RS06440 1549196 .. 1549247 + -7.6 -4.08692 CCTGCCGCGGGCTGT CC-GCGCCGGCTGTCCGCGCCCCGC GCG GCTGCGAGCGCTCCGCCAGCGCTGG TTTTCGGGCCGGTTC 71 302 LT478_RS06445 1550053 .. 1550074 + -9.5 -2.58999 TAGTAGCACTGCCGA GGATGTTTC ATGT GAAGCATCC ATTCGTGTGTGCGGC 56 38 uvrC NONE rapZ NONE LT478_RS06460 NONE whiA 1555879 .. 1555912 + -8.1 -3.56092 ACGGCCACGTTGCTC TCGCCGTAGGCGT ACGTCGCC ATGCCGGCGGCGA TTTCCAGCATGGTGG 63 261 gap 1557402 .. 1557423 + -15.9 -4.13654 CAGCATTCCCCGAAA CGAGCCTGC CTTG GCAGGCTCG TTTCTCGTTTAGACA 100 41 LT478_RS06480 1558646 .. 1558679 + -16.7 -3.64703 TAGCAAGCAGGCGAT TGCCCCGAACGGGAG ACGG TTCCCGTCCGGGGCG TTTCGATGGAAAGGA 100 38 tpiA 1559505 .. 1559516 + -3.6 -3.40403 CGGGCGAGCGAAGCG GGTC GAAG GGCC TTCTCGTCAACGGAG 47 55 gpmI 1561239 .. 1561259 + -10.3 -2.79183 ATGAGGCGAGGGGGA CGGGGCTGG CGT CCCGCTCCG TCTCGTCCCGCTACG 61 58 secG NONE LT478_RS06500 1561794 .. 1561811 + -11.3 -4.79352 ACCAGAGAGAATGGA GAGAGCC TTAG GGCTCTC TTTTCTTATACCTCC 100 37 LT478_RS06505 NONE LT478_RS06510 1563508 .. 1563529 + -17.3 -3.34043 CGAGGCATGAAAAAA GCCCGTCGG TTTG CCGACGGGC TTGTACGATCATGGA 93 57 LT478_RS06530 1564133 .. 1564155 + -13.5 -5.5112 ACCATGAATTCGAAA GAGCCTTCG ATCTG CGAAGGCTC TTTTTTGTTGCTCCG 100 37 thiS NONE thiF NONE LT478_RS06550 NONE thiH NONE LT478_RS06560 NONE LT478_RS06565 NONE LT478_RS06570 1570468 .. 1570525 + -30 -2.78395 AAGGCGGCGCGCGCG AAAGGTGCGGCCTCTGGTGCATCGCG AAGCCG CGCGATGCACCAGAGGCCGCACCGGA TCATTCCTCGCCATT 100 46 LT478_RS06605 1577909 .. 1577936 + -21.4 -3.27704 GGAAGTAGCGCTTGT CGGAAAGGGGCC TGCA GGCCCCTTTCCG TTCGGTTTGACGCCT 100 33 rnd 1580119 .. 1580150 + -10.8 -2.53759 CTGCGCGTGGAGCAT CGGAGTTGAG-CGCC TCC GGCGTCTCGGCGCCG TCAGTTACGAATCTT 60 17 LT478_RS06620 NONE xseA NONE xseB 1582663 .. 1582677 + -2.7 -3.53012 CACCAGCTTGTCCTA GCGGG GAAAA CCGGC TTTCGAGAAGGAGAA 47 25 LT478_RS06635 1583073 .. 1583117 + -13.7 -4.21812 ACCTGCGAATACGCT TCGATCGAGGTCGTCTTGCCG TTGTC CGGCA-GACGGCCTCGA-CGC TTGTTTTCGGTGAGC 100 48 LT478_RS06640 1584462 .. 1584499 + -27.9 -3.53012 GCACGAAGCTGTAAA CGACGAGGCCCCCGCAGT TCA AC-GCGGGGGCCTCGTCG TTTGGCAAGCAGGCG 100 43 glf NONE LT478_RS06655 1588280 .. 1588291 + -5.8 -3.57792 CAGCTTGCACACGGC GTCG TAGG CGAC TTTGGCCATGGCTCC 57 322 LT478_RS06665 NONE LT478_RS06670 NONE cydC 1595034 .. 1595046 + -9.1 -3.06671 AACAGCACGCCGTCG CGCTC GTC GAGCG TCTTCGCATGGGTAT 60 184 LT478_RS06695 NONE dnaG 1600404 .. 1600435 + -15.8 -2.66316 GCGTTCCTGATCGGT TCCCCCGCCTCGCG CATG CGGAAGGCGGGGGA TGGTATACTCGACGC 78 31 LT478_RS06705 NONE LT478_RS06710 1601927 .. 1601962 + -5.9 -2.70932 ATACGAATCCGACGA TAACCCGCGCCGCCC TGAAAC GGGCGGCGCGTCCCA TAATTCAGAAGGACG 46 109 def 1602510 .. 1602540 + -5.4 -3.13403 GGGGGAGACCTCGCT CGAAGCGCG-GGT GCGCTA ACCATGCGCGTCG TGTTCATGGGCACGC 50 7 fmt NONE LT478_RS06725 1604925 .. 1604951 + -18 -5.42975 GTCCTTGCGACGCTG CGGGCCCGGG GCATGCG CCCGGGCCCG TTTTTCTTTATGTAC 100 49 LT478_RS06730 1606406 .. 1606458 + -20.5 -3.17075 TAGGCCGTAATCGAA GGATTCCGTGCGGCATCGGCCGGGG CGC TTCCGGCTACCGCCGCACGGGATCC TTCGATTACGCAGCG 95 60 LT478_RS06735 1607284 .. 1607299 + -6.8 -2.73681 CATCCGATGATCCCA TCCGTC TCGC GGCGGA TCCTTCCGCTGCATC 50 99 LT478_RS06740 NONE LT478_RS06745 1609854 .. 1609878 + -9.3 -3.97368 TAGACAAGAGAGCTG CGCGCCGGAC GCTCCA GTCCGGC-CG TTTATGCATTCGGAC 73 38 LT478_RS06750 NONE LT478_RS06755 NONE LT478_RS06760 1612045 .. 1612061 + -2.1 -3.06302 CCCGCAGGTGGAAGG AGGCGCA CGA TGAGCCG TTCCGTCAACATGGT 41 13 LT478_RS06765 1612703 .. 1612719 + -12.3 -3.17714 CTCCAAGCCCTCGTC GCGTACC CAA GGTACGC TTCCTCGGGCTTTCA 74 138 LT478_RS06770 NONE LT478_RS06775 1615093 .. 1615150 + -21 -2.52543 GGCAGATTGACTTTG CATCATCGCCCGAAAAACAC-G-CTTGC AGGA GCGATTCCGTGTTTTTCGGGCGATGATG TGCGTTCGCGGGCGT 100 72 LT478_RS06785 1616716 .. 1616741 + -19.1 -4.58283 CTTCTAAACCTGCTC GGAAAGCCCGC GAAA GCGGGCTTTCC TTTTTGCGGAGCTTG 100 34 LT478_RS06790 1618336 .. 1618364 + -2.2 -2.58249 ACGTTATCCCAACTG CGAAAACGGCGC TTTTC GCGTCGTAACCG GTTCTGGACAATATA 38 52 LT478_RS06795 1619597 .. 1619607 + -4.6 -4.20696 GTGGATCAAGCTTCT GCTG CCG CGGC TTTTGAAGTTGATCA 65 467 amrA NONE amrS 1622341 .. 1622357 + -13.7 -3.95324 CGCTATCATATCTGC GGTGCCG AAA CGGCACC TTCTTATTGGAGATG 91 87 LT478_RS06815 1622472 .. 1622489 + -14.1 -4.4261 CCGCCAGAAACGCCA GCGCCCC GATC GGGGCGC TTTTCGTATTCCCGG 100 35 LT478_RS06830 1627099 .. 1627120 + -2.3 -3.29511 TACGGTATCATTACC TCGTCGCC TCGCATT GGC-ACGA TTCTGCGCGGGTGCC 44 101 LT478_RS06835 NONE LT478_RS06840 1628898 .. 1628919 + -2.9 -3.78775 GCTGTCGTCCTGCAG GCG-GTGCGG AGG CCGTGCATGC TTTCATCCTGAGCGC 52 60 yedF 1629671 .. 1629688 + -2.7 -2.70932 GGGCCGAGACGTAAG GATCGTG GAAC TATGATC TACTTCGACAACGCG 39 45 LT478_RS06850 NONE LT478_RS06855 NONE LT478_RS06860 1632141 .. 1632174 + -23.9 -2.80492 CCGTGCAACGTCCGC CGGCCGCATCGCCCC CTTC GGGGCGATGCGGCCC TACTTCATGCTGATC 100 293 LT478_RS06870 1634335 .. 1634354 + -7.8 -3.03124 CAGCAACATTCGGTC GCGGTTCG ATGA CGAACCAC TATTGCGACATGCAG 56 66 LT478_RS06875 NONE LT478_RS06880 NONE LT478_RS06885 1638653 .. 1638699 + -18.7 -2.73364 GCCGGAGTCGAAGGA TCCCGCGCGGCGCCAGCTG GAAGCGCCG CGGCTATCGCCGCGCGGGA TCCTTCGACTCCGGC 86 146 LT478_RS06890 NONE fdhD 1640473 .. 1640488 + -6 -3.57263 ATCCATCCGGTTTCG CCGTGC ACGC GCCCGG TTTCGCCGTGCGCCT 57 62 LT478_RS06900 1641376 .. 1641394 + -5.8 -3.57144 GGCGAGAAGCCTGCT GCGTGAGC TGC GCCCCCGC TTTCGCAATAGGCGG 57 20 LT478_RS06905 1642479 .. 1642499 + -3.2 -5.15634 GCGCGACGAGTCGAA GCCTTTGT CTGTC GCGGAGGC TTTTTTCATGCCCTC 80 264 pyrR NONE LT478_RS06915 NONE LT478_RS06920 1645472 .. 1645503 + -23.1 -3.30124 GATCTTCGAACCACG CGGCCCCGCATCG AGCGAA CGATGCGGGGCCG TTCTGCGCGATGCCC 100 56 LT478_RS06925 1647307 .. 1647332 + -10.3 -5.24129 ACACCCTGCATCCGT GCGCCTCCCAC ATCA GATGGAGGCGC TTTTTTGTAGGGGCG 100 438 carA NONE carB 1652127 .. 1652153 + -6.5 -3.36273 TTGTCGAGATGAACG GCGGGCGGG ACCCGGAAA CCTGTCCGC TTCATCTTGCCCCAA 56 46 LT478_RS06940 1652847 .. 1652870 + -6.6 -3.58343 ATGTTGGAGTTGCGC TAGCGAGCGCC CTG GGCGC-CGCGG TTTCAAGCTGATCGA 60 23 LT478_RS06950 1653754 .. 1653776 + -6.3 -4.4078 AGTACGTGGCGTTGT C-GTTCGACG AGTA CGTCGAGCCG TTTTCGTTCCAAGCC 73 406 LT478_RS06960 1654884 .. 1654894 + -6.8 -3.01712 AAGGAAGGGCGATGA CACG GAT CGTG TCTTGCCGCGACGGC 52 26 LT478_RS06965 1655728 .. 1655753 + -11.9 -3.05596 CAACCCTGATGGCCG CGTGGCTGAACG ACG CGTTC-GCCGCG TTCGATGCGACGATC 68 187 LT478_RS06970 1656346 .. 1656363 + -4 -3.1364 GCTCCCGTGCGACGC AGGCGG TAGGTC CCGCCG TTCGCTCCTTCCGTC 45 17 LT478_RS06975 1657407 .. 1657431 + -17.3 -3.05596 ACAGTCCTCGCTCGG TCGAACAGTCC GCA GGACTGTTCGA TTCGCTGCGGAACTC 87 110 LT478_RS06980 NONE pyrF 1659253 .. 1659279 + -8 -4.07568 ACAAGGTGAAGTGGG CGAATGCGTGAT AGT ATCACGGAATCG TTTTGGAACAGAAGG 71 166 LT478_RS06990 NONE gmk NONE LT478_RS07000 1660640 .. 1660654 + -11.4 -3.0094 ACCTGCGTGTTCGTT TCGCGC TAC GCGCGA TCTCTCTGCATCGAA 68 203 thiI 1661924 .. 1661957 + -21 -4.19177 CAGAAGCTCGCAAAA GCGGCGTCCCCGGG AGATAC CTCGGGGGCGCCGC TTTCTCTTGCCCCGT 100 54 LT478_RS07010 NONE LT478_RS07015 NONE holA 1666580 .. 1666617 + -21.3 -3.25823 GATAACAGCCCTCTA ACGCGAAGGAGCCCCGG ATTT CCGGGGCTCCTTCGCTC TTGATATGCGGACGG 100 120 LT478_RS07030 1668080 .. 1668108 + -6.6 -2.90496 TAGGCTCCGTTTTCC CGAAGCGCCCGCA TGCG TGCGAGCGCG-CG TCATTTGAAAGACAG 51 79 lepA NONE LT478_RS07040 NONE dusB NONE hemW 1672268 .. 1672282 + -2.1 -2.63382 TCGATCTGGCCGACT GACGCG CGCC CGC-TC CTTGTGCGTCTCCCG 38 24 hrcA 1673439 .. 1673455 + -11.5 -2.87211 AAACGACATGGGAGA CGGCGCG TCC TGCGCCG TCTATGAGGAAAGGT 66 39 dnaJ NONE LT478_RS07065 NONE LT478_RS07070 1677041 .. 1677060 + -5.8 -3.6692 GGCCCTTTCTTGAAT GAGGCGATT CGA AAT-GCCTC TGTTTTCCGATAGGC 57 330 LT478_RS07075 1678369 .. 1678385 + -4.4 -3.14602 CGACCTCGAACCGCC TC-GCCG TTCC CGGCAGA TCTTGATCACCTGCA 48 141 LT478_RS07080 NONE ybeY NONE LT478_RS07090 1680369 .. 1680382 + -9.5 -3.19602 CGCCGTGTTCGTCCC GCGCC TTGC GGCGC TGTTCGTCTAACGCA 61 1 era 1681471 .. 1681488 + -4.7 -4.14243 CAAACGGGGCGTTGT CCGGCTG CGCT CGGCCCG TTTTCGGCTACAATC 61 152 LT478_RS07100 NONE recO NONE LT478_RS07110 1684585 .. 1684598 + -3.1 -4.1196 CGCGGGCACCTCGCC G-GCCT TCC AGGCGC TTTTCGGCGTCGATT 60 499 LT478_RS07135 NONE LT478_RS07140 1689763 .. 1689780 + -3.3 -3.86015 CCTGATGGGGGCGCG GCTTCGA AGCG TCGGCGC TTTGTGCGGAACCTG 56 68 rpsO 1690300 .. 1690315 + -11.8 -4.18018 ATCTAGCGTATGAAA GCCCGC CTTG GCGGGC TTTTACATAGAGGCG 89 35 LT478_RS07150 1692686 .. 1692711 + -20.5 -2.70932 CGGTTTTGATTCGAG CGAAGGGGCCG AACG CGGCCCCTTCG TCGTTGCGGGAGGGC 95 42 dapB 1693586 .. 1693600 + -2.1 -2.80113 GTTTGGAGAACTTCA TG-GCC TGAG GGCTCA TCTCGTGGGATAATA 39 18 dapA 1694735 .. 1694753 + -17.4 -3.25823 TGAAGAAGGACCGAA GCGCCGCG CAT CGCGGCGC TTGATATAACCGCGA 89 176 LT478_RS07165 NONE LT478_RS07170 NONE LT478_RS07175 1700580 .. 1700604 + -7.8 -2.52516 AACATCCGCCGCTTA GGGGTTTCCG CCGGT CGGAGAACCC GTTCGTCATGGAGCG 52 25 LT478_RS07180 NONE rimO NONE pgsA 1704020 .. 1704032 + -3.3 -3.57144 TAATGGTAAGCGGCA AACGC TCA GCGTC TTTGGCGCTCGCGGC 51 209 recA NONE LT478_RS07200 1705994 .. 1706010 + -5 -5.29782 CGTGCGTTCGTTCAT GCCCGG TTTTT CCGGGA TTTTTTATGCCTATG 89 216 rny NONE LT478_RS07210 NONE LT478_RS07215 NONE miaB NONE miaA 1711710 .. 1711729 + -15 -2.7035 CTCCCGACTGTCTTC GCACGCCG ATGC CGGCGTGC TCGTCTCTGCATCGA 77 172 hflX 1713084 .. 1713119 + -29.1 -3.86346 GTAACTCTAAGGTAA GCGAGCCGCCCCGGG CATCGA CCCGGGGCGGCTCGC TTTGTCGCAGGGTAG 100 42 LT478_RS07240 1714370 .. 1714382 + -9.1 -3.87994 GGCCGTTCCATAACC CGCAG ATG CTGCG TTTCTGCGGCTGCGT 73 65 LT478_RS07245 1716223 .. 1716248 + -3.1 -3.41795 GGGCGATACCCACGT GCGCGTTGTCC GATA GGAAGGAGCGC TTCTCGTGCAGGTTT 49 10 nrdR 1716782 .. 1716798 + -2.2 -3.83214 CCGCATTGGAGGGAT TGCGTT GATAG AGCGCG TTTCGATTCCTTTGC 52 18 dut NONE LT478_RS07260 1717791 .. 1717803 + -9.1 -2.90496 ATAGGGCCTTAGAAC GGCTC TCA GAGCC TCGTTTGCAAAACCC 59 118 LT478_RS07265 1718367 .. 1718408 + -9.5 -4.86621 CGCTGTCGAAACCGC ATAAAGCGCTGCAGGTT ATGCACGG AACCCGCAGCGCTTTGC TTTTTGCTTCCGAAT 100 48 LT478_RS07275 1720322 .. 1720363 + -21.1 -2.59564 CTCCTTCTGCAGCGG TCGATGCGACCGTCTTAGAG CAA CTCTAAGACGGTCGC-TCGC ATTATGCCGTCGCCG 100 48 LT478_RS07280 1721251 .. 1721270 + -16.4 -3.2218 GGATACGAACGAGAA GGGCCGGC ATAT GCCGGCCC TTCCTCCGTCTTGGA 85 249 wecB 1722701 .. 1722732 + -5.8 -4.70659 TCTCGCTCCGCGCAC GAAAGG-TCGTCGTC CAC GGCGACGATCCATCC TTTTTCGCTCTCGAC 79 296 LT478_RS07295 1725533 .. 1725578 + -2.4 -3.70902 CCCGCGCGCAAGCGG GCGTCGGCCTAGAGG-CTCGC GACGG GAGAGGCCTCTTCGGCAACGC TTTCAGTCTGACGAC 52 14 LT478_RS07315 NONE LT478_RS07320 1729320 .. 1729336 + -4.3 -3.55071 CGCACGACGCACCGT GCGAGAG ACC CTTCCGC TTTCGGGACATCTCG 52 150 LT478_RS07325 1730168 .. 1730180 + -3.4 -3.7732 ATCGATGGCCAGCCC GAAG CGCCC CTTC TTGTTCGTATGCGCG 54 260 LT478_RS07455 NONE LT478_RS07460 NONE LT478_RS07465 1762080 .. 1762132 + -33.9 -2.62184 CGCCGACGGACATCA TCATCGCTCCGAAAACACGCCTC AGCGCAC GAGGCGTGTTTTCGGAGCGATGA TGATGTCCAGGCAAG 100 513 LT478_RS07490 1767819 .. 1767847 + -17.5 -2.56596 AGGGCCGCCGCAAGA TGCAGGGCGCC GGTCCAA GGCGCCCTGCA TCCGTTCCTACGCCA 83 44 LT478_RS07505 1771425 .. 1771446 + -6.5 -2.82623 AGCCGACGGCGTGTC GCGGACG-GC CAT GCGCGTGCGC TCCTTCTCGGCGCGC 49 441 LT478_RS07525 1776751 .. 1776770 + -3.4 -3.86822 CATGCCGCGCGCAGT TCCGACCT CCTC AGGCCGGC TTTCTCGAAGGGTTC 56 88 LT478_RS07535 1779891 .. 1779904 + -5.3 -2.6155 TTGTACACGAGCGCC CAGAA CAGG TTCTG CTTGATGTTGCGCAG 46 520 LT478_RS07555 1783611 .. 1783646 + -17.8 -4.27316 ATCCCTCGGCATCGC GACGCACAGATGTTTC ACGT GAAACATCTGTGCGTG TTTTCCATTCGACGA 100 82 LT478_RS07580 NONE LT478_RS07585 NONE cadA 1790269 .. 1790292 + -3.1 -4.57569 TCATCGCCTGAAAAA CACGCTAGA AGGCCG TTTTGCGTG TTTTTCGGGCGATGA 68 124 LT478_RS07595 NONE LT478_RS07600 1791332 .. 1791354 + -9.1 -4.56597 TCTTCGCTCCAAAAA CACGCCTCG TCCGC TGGGGCGTG TTTTTGGAGCGAAGA 84 62 LT478_RS07605 1791744 .. 1791758 + -8.6 -3.24532 ACCGGCTGCATGTTT TGACGT AAA ACGTCA TATTCATATCATTTT 57 45 LT478_RS07610 NONE LT478_RS07615 NONE LT478_RS07620 NONE LT478_RS07625 1794334 .. 1794367 + -4.6 -3.08798 CAATTCCGTCATGCG GCGT-TCATGCCCGCG CAAG CGCGGG-ATGGCACAC TATTCCGTAGACCGT 46 80 LT478_RS07630 NONE LT478_RS07635 1798043 .. 1798056 + -2.3 -3.04263 AGGACGGCCGCCTTA CCGTG CACG CACCG TCTTCACGATGGAGT 41 84 LT478_RS07650 NONE guaA 1801163 .. 1801196 + -16.8 -4.10925 AGATGCTTTTCCATA GGAGCCCCTGAATC AAGCGA GATCCAGGGGCTCC TTTTCCGCCATATAT 100 135 LT478_RS07665 1803983 .. 1804003 + -2.4 -3.78042 TCGCCACCGACTCTT CGAGCTCG CCAAC CGAACGCG CTTTTTTGTCCTCGA 52 227 LT478_RS07680 1807825 .. 1807840 + -3.9 -4.1711 AGCCGTCGAGCGCTT CGCGG TACGCC TCGCG TTTCTTCAGGATGGT 62 458 LT478_RS07710 1815441 .. 1815456 + -6 -3.48276 GACGCCCAGGATGTA GTCGCG CGCC CGCGCC TTGTCTCCCGAAAGC 55 465 LT478_RS07720 1819889 .. 1819902 + -9.5 -3.61398 CTTTCAAGCTGGTGC CGCGC AGAA GCGCG TTCTTGCCGAAGCGC 68 486 LT478_RS07755 1831287 .. 1831302 + -6.8 -4.07568 ACAGGGATCCGATGA TGGGAG CGCT CTCCCG TTTTCCCAGGACGAC 68 116 LT478_RS07795 1840215 .. 1840257 + -3.3 -2.94747 GTCGGCGCGCGAAGC CCGCGATGCGGGCGAGTCCT CCGA AGCCTTCGCCT-CGTCGCCG TGTATAATCGCATGC 42 45 LT478_RS07800 NONE LT478_RS07830 1847883 .. 1847899 + -5.8 -3.13403 TAGCCTGCTTGACGG CGGCGA GCAGA TCGTCG TATTCCTCGAACGCG 50 38 LT478_RS07840 1849079 .. 1849120 + -11 -3.53091 TCAAACGCTGGTAGC GGCACGAACGCCGCGTTCTGC GAA GC-GAACGCGGCA-TC-TGCC TTTCCGAACGCGCCT 74 27 LT478_RS07845 1850336 .. 1850363 + -2.5 -2.68823 CGATTCTGAAGCGGC CGGCTAGGACG ACCCAG CGTCCATGCCC ATTCTCTCCAAAGAA 38 19 LT478_RS07850 1851356 .. 1851380 + -8.4 -3.44051 CAGGCGGTTGCGCTC GCCGCCCGAC AGCAC GCCGGCCGGC TTCTGCTGGTCGGGC 62 421 LT478_RS07865 1854798 .. 1854835 + -10.6 -3.28924 CCAGCGCGTCCCATA CCT-CGTCGTCGGTCGCG TCCT CGCGCCCGATG-CGCAGG TTGTCGCGCAGCGTC 65 435 LT478_RS07910 1867289 .. 1867303 + -5.6 -3.59979 GGCATCGGGTACCCT GCACGT TTC ACGCGC TTTCCCATCACGCCG 57 92 LT478_RS07930 1871909 .. 1871935 + -14.4 -2.50622 AGAACAGGCGAGGCG GCGCTTCGGGCA GCT TGGCCGAGGCGC ATTCCTCCACTGTAT 76 57 LT478_RS07965 1881485 .. 1881502 + -2.6 -3.87815 CGCCTTCGACCGCAT GCCGAG ACCCTA CTCCGC TTTGTCCCCGTAGGC 54 44 LT478_RS07975 1882592 .. 1882619 + -13.6 -3.53012 CGTTGTCGCCCGAAA GCCGCTGTTTTCA CGC TGAAAAC-GCGGC TTTCGGGCGACAACG 86 80 LT478_RS08075 1903173 .. 1903222 + -3.6 -4.07568 CGCATGCGCGTTCGT CCC-TC-G-TCGCTGCTTTGCCTTC GGC GACGGCGAAGTGGCGCTCTGATGGG TTTTCCCCGAACCGC 59 200 LT478_RS08080 1904327 .. 1904343 + -2.1 -4.85782 CACCGGAAAAAAGAC GAGCAAG ACG CTCGCAC TTTCTTTTTACCGCC 72 103 LT478_RS08085 1905487 .. 1905508 + -2.1 -3.14931 CACGTCGGCGGCGAA CCACGC-GCC CAC GGCCGCCAGG TTGATCGACGCTGCA 42 155 LT478_RS08110 NONE LT478_RS08115 1911228 .. 1911251 + -18.2 -4.72272 CCGATCCATGTTTGG GAAGCGGCCC GCAA GGGCCGCTTC TTTTTCGTCCGCCGA 100 52 LT478_RS08120 1913920 .. 1913936 + -7.9 -3.30124 ACACTACCTTCACGC CCACGGG CAG CCCGTCG TTGTCCACGGTGCCC 58 238 LT478_RS08270 1944630 .. 1944642 + -10.5 -3.73224 CCGCACGAGCCGAAA CGCCC AGC GGGCG TTTCGTGCGAGCTCA 76 185 rpmB 1963539 .. 1963554 + -11.8 -5.02439 AGCCGACATTGAAAA GCCCGC TCGC GCGGGC TTTTTGTCGTTCTCT 100 72 LT478_RS08385 NONE LT478_RS08390 1971034 .. 1971055 + -5.1 -3.05384 TACCCGCGCTGCGGC CGTGCGA CAATACGC TCGCGCG TTCGGTGAACCCCCG 46 238 LT478_RS08460 1985166 .. 1985188 + -16.2 -3.18264 TCGCCCCAATGAGAA GCGCCCGGCC GTC GACCGGGCGC TTCGTCGATCGCAGG 85 57 LT478_RS08490 1990943 .. 1990960 + -14.1 -4.36411 TTGCATGCAAAAAAA GCGGCCC CTAA GGGCCGC TTTTGCTCGTTCATG 100 57 LT478_RS08510 1993473 .. 1993490 + -11.3 -4.30416 TGAGGATATGAAAAA GCCTTCC GAAA GGAAGGC TTTTGAATTCATGGT 93 38 LT478_RS08520 1993824 .. 1993851 + -15.6 -5.24129 CCAGGAAAATCGAAA CCGGTTGCGCTA CGAC TCGCGCAACCGG TTTTTTATGCGGCGG 100 38 LT478_RS08560 2004253 .. 2004265 + -4.7 -3.14132 CGCCACGCGGCGCAC GGCCG GCT CGTCC TTGCTCCACACCAGC 47 313 LT478_RS08575 NONE LT478_RS08580 NONE LT478_RS08585 2012736 .. 2012794 + -2.3 -4.26076 GCCCGACACGACCGA GGCCCGACGCGCC-CGCATTGAAGCGCG CGCCAA TGCGCCGCGA-GCGCGGCG-GTCGAGCA TTTTGATGAGGATGC 60 401 gltX NONE LT478_RS08595 NONE LT478_RS08600 NONE LT478_RS08605 2017253 .. 2017272 + -9.3 -3.54424 GGACGGACAGGCAAA CCCTACG CGTAGC CGTAGGG TTTGCGCAGGTACAC 66 72 LT478_RS08625 NONE LT478_RS08630 2021858 .. 2021871 + -5.9 -3.34962 CCTGCGCGCCGTCTT GCCGG ACGT TCGGC TTCTCCCCTGTCACC 53 54 LT478_RS08650 NONE nth NONE LT478_RS08660 2031464 .. 2031488 + -8.6 -3.54424 CGCATGGAGAAGGCG GCC-GCGCTGT TCGC ATAGCGCAGGC TTTGCCGCACTCCCG 62 8 LT478_RS08665 2032277 .. 2032294 + -3.3 -3.29144 GAAGCGAGCCGAGGC GCTCCGGC GCT GACGG-GC TTGTCCGCCGCCTCC 47 13 LT478_RS08670 2033406 .. 2033419 + -5.9 -3.14931 AGATGACGCGCACGA TGCGG CGCG CCGCG TTCATGCGCGCTCCG 49 432 LT478_RS08695 2037501 .. 2037511 + -6.8 -3.14931 CAGCTTGAGATCGTG CAGC GAC GCTG TTGCTCCCGAATGGC 51 268 LT478_RS08710 2039015 .. 2039034 + -15 -3.76224 ACTCCGGACGTGAAA GGACCCGG TTTC CCGGGTCC TTTCGTCAGTGCCGA 93 161 pheA 2044091 .. 2044109 + -4.4 -3.40403 GATGAGGACGATGCC GCCGGCGA CGG TGGCGGGC TTCTCGTAGCGGGCG 49 258 LT478_RS08775 2053994 .. 2054013 + -13.6 -4.34402 CCATCTGAATGCTAA GAACCCGC TTCG GCGGGTTC TTTTCGTATCGGGGA 100 38 LT478_RS08780 2054186 .. 2054203 + -14.1 -5.84381 ATCTGAATACAGAAA GCCCGCC GATC GGCGGGC TTTTTTTCTTGCTCG 100 40 LT478_RS08875 2074568 .. 2074594 + -13.7 -5.55769 ACCAGGTAAACGATA CGAGGCCGGAA TCCGT TCCCGGCCTCG TTTTTTATTGTCGGC 100 37 LT478_RS08890 2079282 .. 2079308 + -9.3 -3.27475 TGGAGCGCAGCGCTT CCGGCGCCTCG CCGTC CGAACCGCCGG TCTTGTAGTCCACCA 62 494 LT478_RS08905 NONE LT478_RS08910 2086602 .. 2086626 + -17.2 -5.30616 CACCACGAAATGCCA GGCCGGAAGC TCATC GCTTCCGGCC TTTTTCTTTGCCTGC 100 36 LT478_RS08915 2088269 .. 2088314 + -12.7 -2.76696 GGTACCAGGTTTGTG CATTATGCGCTCATCGGACCGG AGG TCGA-CCGATGAGCGTATACTG GTTGTTCGGCGCCCG 69 69 LT478_RS08920 2090314 .. 2090330 + -4.4 -4.06611 ACCCGCGCGCGGCAA CCTCTT AGCCC AAGGGG TTCTTGTTCTGGTTG 61 380 LT478_RS08940 2094398 .. 2094430 + -16.2 -4.65895 ATCCTCTCCTAACGA AAGCGCCCCGCCGG CTTAT CCGACGGGGCGCTG TTTTTGCATAGACGC 100 60 LT478_RS08960 2096454 .. 2096485 + -4.4 -4.09685 AGGATCCGGCCGCGG CGT-TTCGGGTCTGC CGA GCGTGCTCGAAGACG TTTTCCCAGGTCGCA 61 105 LT478_RS09000 2105214 .. 2105239 + -21.9 -5.08169 TCGCTTCGCGCGGAC GGGGCCGCTCG GCGT CGAGCGGCCCC TTTTTTGGGCTCTAT 100 46 LT478_RS09005 NONE LT478_RS09010 NONE LT478_RS09015 NONE LT478_RS09020 2109626 .. 2109659 + -20.5 -4.72272 CCGCGCGATCGAACC GCCTCCCATTTCTCG GACA TGAGAAATGGGAGGC TTTTTCATGACCGGG 100 61 LT478_RS09030 NONE LT478_RS09035 2116042 .. 2116064 + -3.3 -3.53012 CCCGACGCAGACGCC GGGGCCG CCTCGCGCC CAGCCCC TTTCGCACGCAACCG 49 75 LT478_RS09040 2117347 .. 2117370 + -12.6 -3.27525 GCCCACGCCGCGCTG CGAATGTTTC ACGT GAAACATTCG TTCGCTTTCACGCAC 76 44 LT478_RS09045 2118566 .. 2118581 + -6.2 -4.49556 CAAATGCCGCGCGGA TGTTTC ACGT GAAACA TTTGTTTGCTCGAAC 74 229 LT478_RS09065 2122727 .. 2122750 + -15.2 -3.63805 ACCGGGCGCAAAAAA GCGACGGGCC CGGA GGCCCGCCGC TTTCGCATATCGACT 90 155 ahcY 2125775 .. 2125801 + -14.5 -5.48825 TTTCCTGCAGGTAAA GAACCCGGTGC ATGAC GCATCGGGTTC TTTTTTTACCTGATC 100 61 LT478_RS09115 NONE LT478_RS09120 2136740 .. 2136770 + -9 -3.7108 TCAAGGGCTGCTTGA GGTTCTTCATGCCT CCC AAGCATGGTGAACC TTTCAATATAAGCAT 71 64 LT478_RS09125 2137289 .. 2137311 + -12 -3.54424 CCTCCCAACGCGAAA GGAGCGCC CCTTCCC GGCGCTCC TTTCAACGCGTCAGG 74 63 LT478_RS09130 2139101 .. 2139121 + -2.3 -3.53012 GCGGCAACCGCCCGC GAGCCGAGG TAG CCAGGGCCC TTTCCCGCCGGCAAA 47 14 LT478_RS09135 2140853 .. 2140864 + -7.2 -4.16842 GGGCACCGGCGATTT CGCG AAAT CGCG TTTGTTGCGCGTGAC 68 120 LT478_RS09185 NONE LT478_RS09230 2159976 .. 2159997 + -5.1 -3.62275 CGTCGCCGGCCAGAT GGC-CGAACG TAT CGTTCACGCC TTTGAAGTCGTCGAT 55 329 LT478_RS09250 2163940 .. 2163971 + -21.6 -3.14881 GTCGCGTAGCCCATA CCGGGGCTCGCTTC CCTT GCAGCGAGCCCCGG TTCATCCCGAAGTTC 100 40 LT478_RS09255 NONE LT478_RS09260 2165901 .. 2165920 + -12.8 -2.75481 GCTGACGACATCGGA GCCCGCCG CGCA TGGCGGGC TCCTTCCGATTCGAG 69 48 LT478_RS09265 NONE LT478_RS09270 NONE LT478_RS09275 2170025 .. 2170040 + -8.2 -3.75169 GCGGCCCCTGGCGCG CCGCGC TTCG GCGTGG TTTCCTGCGGTCATG 67 167 LT478_RS09280 2170327 .. 2170339 + -4.7 -3.08706 CGTCGTAGTCGCCGC GCGAG GCG CCCGC TCTTCGGCTATACTT 46 33 LT478_RS09285 2171853 .. 2171868 + -6 -3.01712 GAAAACGTGGTGAAG CCGCCG CACA CGCCGG TCTTGAGGAACAACA 48 272 LT478_RS09295 NONE LT478_RS09305 2173355 .. 2173397 + -15.7 -4.2558 ATTCGCCCCGCCCTC GACGAAGGCCCGACGCGC ATCGAACC GCGCATCGGGCCTTC-TC TTTTAATGCGCCCTG 100 46 LT478_RS09355 2190329 .. 2190339 + -6.8 -3.36694 GCGCGTTGGCACCCT GAGC CTC GCTC TCTTTGCAACTCGAT 55 138 LT478_RS09365 NONE LT478_RS09370 2194409 .. 2194424 + -6.2 -4.1552 AGGTCTTCGCCAGAT TGTTTC ACGT GAAACA TTTGTTCCAACCATC 68 337 LT478_RS09450 2212739 .. 2212749 + -3.2 -3.68351 GCCCGACCGCCTCCG TGAG AAG CTCG TTTCCGTGCTGCCAA 51 220 LT478_RS09500 2223197 .. 2223227 + -22.7 -3.59979 GGAACAAGTAGAGCG CGTCCCGAACGGC CGATC GCCGTTCGGGACG TTTCCAATCGCAGGC 100 30 LT478_RS09515 2225988 .. 2226003 + -6.2 -2.87211 CGCAAACCGTACAGA TGTTTC ACGT GAAACA TCTGTACGAGAGCGT 48 58 LT478_RS09520 NONE LT478_RS09525 NONE LT478_RS09530 2229408 .. 2229433 + -19.1 -2.66316 CGATCGCACGTCCAC GGAAAGCCCGG CGCG CCGGGCTTTCC TGCTATGATCAACGA 88 51 LT478_RS09535 2230790 .. 2230831 + -21.7 -3.14132 GCGGATCGTACCTGG ACGCA-CGAACGGCCCGGTC ATC GACCGGGCCGTTCGCTGTGC TTGCTGCAGAAGCGC 100 130 LT478_RS09610 2245400 .. 2245436 + -6.4 -3.33261 AGGAAACGCGCACGC GGCATCGCGCCGCGCCG TCAA CGCCGCG-TGCGAGGGC TTCTCCCGCTTGAAG 56 39 LT478_RS09620 NONE LT478_RS09625 2248384 .. 2248404 + -3.8 -3.15544 ATGAGGCCGCCGATG CCCGCCGC CAGCA GCGCCGAG TTGATGGCGATGACC 45 125 yihA 2251596 .. 2251621 + -17.7 -3.75332 AGCATGCACCCGAAA GAAAACGGCCC CGAA GGGCCGTTTTC TTTCGCTTGAGGAAT 100 51 LT478_RS09665 NONE LT478_RS09670 2258245 .. 2258283 + -21.8 -3.08679 CAACCTCGAGCCAAC CGAAAACGCCCGTCCGCG AAA TGCGGGCGGGCGTTTTCA TGTTGCGTCCCACAC 100 56 LT478_RS09740 2276337 .. 2276363 + -10.9 -3.63895 CAGCAGGCGCTCGAT GCCGCGCGTCTC CGAC GAGATGC-CGGC TTTCACGTGCTTCGG 74 508 LT478_RS09775 NONE LT478_RS09780 NONE LT478_RS09785 2285353 .. 2285375 + -22 -3.35679 CAAACGCGCAACGAA GGCCCGCGGC GTT GCCGCGGGCC TTCTGCATGCCAAAG 100 59 LT478_RS09800 NONE LT478_RS09805 NONE LT478_RS09810 2292127 .. 2292145 + -3 -4.58395 CGGCCGTTCACCTTC TGCACCTC GGT GGAGTGCG TTTTTGCAGGGTCGA 69 440 asnB 2304238 .. 2304251 + -9.5 -3.74747 CTCGAAGACGCACAG GCCGC CGTC GCGGC TTTCGTACAGGTTGC 71 124 LT478_RS10005 NONE LT478_RS10010 2340205 .. 2340227 + -4.1 -3.57263 GAGAAAAGAATACTC GCTTCGTCG AATCG CGATCAAGC TTTCGACGTAACGCT 53 193 LT478_RS10050 NONE LT478_RS10055 NONE LT478_RS10060 2351190 .. 2351200 + -3.2 -2.63102 GTGGGCGTTCGGAGC GTCA TCA TGGC TGATATCGCCGTCAT 40 12 LT478_RS10065 NONE LT478_RS10070 2352466 .. 2352487 + -4.4 -2.62396 CTAGGGGTTCACAGC CCGTCG AAGAGCCGAC CGACGG TAGTGTCGAGGCCTC 43 37 LT478_RS10080 2353168 .. 2353189 + -15.9 -3.06696 CAGCACCACTTCTCC GGACGAGCC CACG GGCTCGTCC TCTGTTACCGGGAAG 82 186 LT478_RS10090 2353956 .. 2353982 + -2.8 -3.53224 GGCGATCGGGACGAT TCGACGCGCTGC TCG GCGGGCCTTCGA TTTCCAAACGGCATC 47 90 LT478_RS10095 2355189 .. 2355207 + -12.4 -3.61398 GGCGGACGCAGCCGC GGCCGTGG CCT TCACGGCC TTCTTGCCGGAAAGC 77 198 LT478_RS10110 2360942 .. 2360959 + -3.3 -3.53012 CGTATGAACCGAACC CGCAACGG CCG CCGC-GCG TTTCCCGAAGGCGGC 49 34 LT478_RS10115 NONE LT478_RS10120 2362552 .. 2362562 + -8.2 -3.85817 CAGCGGCTTGCGATC GCGC TGA GCGC TTTCTCGCGAACGCT 69 19 LT478_RS10135 2365427 .. 2365442 + -2.6 -3.53224 GATGAGCAATACAAG TATACT TACA AGTATG TTTGCAACACGCATC 47 69 LT478_RS10140 NONE LT478_RS10145 NONE queA 2367349 .. 2367407 + -26.4 -3.28791 CCCGCTCCGGAAATC AAATCTTCGCTCCTAAAACACGCCTC AGCGCGC GAGGCGTGTTTTAGGAGCGAAGATCG TTCTGGACAGGACCT 100 83 bfr 2376900 .. 2376949 + -5.1 -2.71011 AACGGCGACGCGAGG ACG--AAGCGGGTTCGCACTTTA CCGAGA TAAAGCGCGAACCCGCTGAACGG TGGTTGACAACGGGT 43 46 LT478_RS10200 2378240 .. 2378275 + -2.6 -4.08945 AGTAACGACTCCAAG GCGATACGGC-ACGTC AAAGAA GGCGTCGCGGT-TCGC TTTTCGCACCCTCCT 57 36 LT478_RS10245 2386088 .. 2386101 + -3.7 -3.73122 TGCCAGCTGGAGCCA GCCGC CGTT GCCGC TTTGAAATTCTTGTA 56 267 LT478_RS10255 2387424 .. 2387442 + -3.8 -3.72576 GACGGCGCATATGCT CGCGGA TCTCCTC TTCGCG TTTCATGACGGCGGG 56 229 sdaAA 2390514 .. 2390550 + -15.2 -3.15544 GAACGGGCATCTGCA CCGAGGGGCCCG CATCCCCGCATCC CGGGCCCCTCGG TTAATCCAAATCGAG 82 74 LT478_RS10295 2398493 .. 2398508 + -11.8 -3.53012 AAAGCCTCGGTTTCG GCCGCG AAAA CGCGGC TTTCGGGCGACAACG 74 134 LT478_RS10315 2401848 .. 2401872 + -11.5 -3.10641 ATAGCTGTGCGCCGA TGCAACCATCT TCA AGATGGCTGCA TTGGGTCATGAGTTG 68 63 guaA 2403805 .. 2403840 + -17.1 -3.54424 AATCAGACAGAAACT C-ACAAGGCTCCTCGA GAAAA TCGAGGAGCCTTGTCG TTTCCGCAGGTAAAC 100 145 LT478_RS10335 NONE LT478_RS10340 NONE LT478_RS10345 2407774 .. 2407811 + -6.1 -4.287 GGGCATCAAAGGCTC GCACAGCCGCCCGATGCG CTC CGCAA-GGGCCGCGATGC TTTTCCGATTTCTTT 68 157 LT478_RS10350 2408402 .. 2408427 + -16.1 -3.53811 CGGGCCCGCTTGGGC AGGCCCCCTCC GGAC GGAGGGGGCCG TTTGCAGGCGCTCGC 93 47 LT478_RS10355 NONE LT478_RS10360 2410263 .. 2410294 + -12.2 -3.53811 AGGGCAGATAGAGCC CAG-GCAGGTGCCCC GCC GGGGCTCCTGCGCCG TTTCCAGCAAGTAGC 79 30 LT478_RS10365 NONE LT478_RS10370 NONE LT478_RS10375 2412920 .. 2412932 + -4.7 -3.34398 GCAATATGCACCTTC GCCCC TCG GGGCC TATTTCCAGCCGAAC 49 181 LT478_RS10380 2414059 .. 2414090 + -7.2 -5.40072 AAACCTTCGGGTTTG CGGGGCAGTATCGT GAAA GCGATTCTGCCCTA TTTTTTTGCCCGAAC 95 140 LT478_RS10515 2443192 .. 2443208 + -5.1 -3.99678 GCAGAGGGTTCCGAC CGCTC TCTGGAT GAGCG TTTCGTTCTCCGGGT 62 334 LT478_RS10540 2450909 .. 2450919 + -3.2 -4.05446 CGAGGAGGCTCCATT CGCA GAC TGTG TTTCTGCTTACAAGC 59 266 LT478_RS10545 NONE LT478_RS10550 2454512 .. 2454531 + -4.9 -3.85698 ATATCGATACCAGCT CTCCCCG AAGGCA CTGGGAG TTTATGCGAGAACAA 59 409 LT478_RS10555 2455610 .. 2455624 + -10 -3.01712 AATTCGGAAATCAAC GCTAGC TTC GCTAGC TGTTCAAGAACAAGG 62 210 LT478_RS10570 NONE LT478_RS10575 2459695 .. 2459711 + -3 -3.12351 AAGAGCCTTGAGGCT TTGTTC GGAAG GAACGA TTAACTATGCGCGAG 41 5 LT478_RS10580 NONE LT478_RS10585 NONE LT478_RS10590 2464492 .. 2464544 + -11.9 -2.74514 ATCAGCCAACGAAGC TATAGAGCGCCACCTCTCCTCTACG AAT CCCAGAGGAGAGGTGGCGCAAGACA TCCTTGCACATTTAC 65 85 LT478_RS10595 2467328 .. 2467338 + -6.8 -4.0162 CGCGGCGGCCCTGCC GTCG CTC CGAC TTTCTCCTCTGAACA 68 185 LT478_RS10600 2467832 .. 2467845 + -9.5 -3.70902 TCGCGGTTTGCGTAT CGGCG CTCA CGCCG TTTCCGTATCGCCGG 71 53 LT478_RS10640 NONE LT478_RS10645 2474775 .. 2474793 + -5.9 -3.08464 ACCTGAATTAGAACC GCCCTCG ATTGA CGAGCGC TTGAATGCATCGTCA 49 30 LT478_RS10650 2475522 .. 2475550 + -8.7 -3.53012 GCACGCAGTATAGAA GCGACGATCTCGC GCT GCTCGATCGCCGC TTTCCCGCGCCCGCG 66 199 thpR 2476210 .. 2476239 + -4.8 -2.73875 GGTCGCGGATCTCGT CGGGGTCGCTCG TCTGGC CGAGCGCCCACA TGGTCTTCGCCACAA 44 84 LT478_RS10665 2478670 .. 2478691 + -5.7 -3.33696 AACTCGTGCAGAAAA CGCGGATCG TGGC CGCTCAGCG TTCCTTCGGACCGGC 52 74 LT478_RS10670 2480607 .. 2480658 + -2.8 -4.63527 GGACAGCTCGAACAG CGCGCCGAGCGCG-TCGCGCT GCAGCATGGAG GGCTCGAACGGGCGCGGCGGG TTTTTCGCGTGCTCC 72 435 LT478_RS10680 2483149 .. 2483189 + -3.4 -3.72576 CTTGTTGATAGCCTG CGCAA-TCCTCTTGA-CGAG CCG CTCGCTCAAGGGCACTTGCA TTTCCTCAAGCGCCA 54 436 LT478_RS10690 2484159 .. 2484193 + -6.5 -4.09685 GGTTGGAGTCCAGCT TGAGCGAGTAC-TCCAC CAC GTGGGTGTGCTCGC-CG TTTTCGCCGGTCACG 68 253 LT478_RS10710 2490758 .. 2490786 + -9.5 -4.56597 CGCGGCTTTCCAGCT CGCGCGCGTCG AACGTGG CGATGCGCTCG TTTTTGAGCGCGGGC 86 347 LT478_RS10720 2492978 .. 2493008 + -5.9 -3.33361 CGCGTCGATGCCCAG CGCCGCCGCCGAG CGGAA CACGGCGCCGATG TTCGTGTAGTTCGTC 53 435 LT478_RS10730 2494292 .. 2494329 + -17.1 -2.90615 ATTCTGACTCCCCCT TTAACGCATAACGCCCG CCGA CGGGCGTTATGCGATCA TGCTTTGCGCGCGGT 85 222 LT478_RS10740 2496336 .. 2496346 + -3.2 -3.79906 CGCGCACCAAGTCGA GCAG CTC TTGC TTGTTGTGCACGTCG 54 127 LT478_RS10750 2499675 .. 2499712 + -11.1 -5.06585 CTTCCTTCCCTCCCT CCGCATGCGCGGGCCTC TTCG GAGGCCCGCGCGCGTTC TTTTTCTGTGCTTTG 100 68 LT478_RS10755 NONE LT478_RS10760 2501507 .. 2501544 + -6 -3.05596 TTTCCAGCAGCAGGC GCTCGGCCGGGACGGC CTGGGC GTAGGCACGGCCGCGC TTCGATGCCAGCATG 49 213 sufC NONE sufB NONE LT478_RS10815 NONE LT478_RS10820 NONE LT478_RS10825 NONE LT478_RS10855 NONE proC 2521775 .. 2521804 + -18 -2.76225 ACGGGATCTCATGAC GAAGGGGTCTGC CACGCT GCAGACCCCTTC TCGTTCGACTTCGTT 86 121 LT478_RS10885 2530822 .. 2530840 + -4.4 -3.01924 AAATAAGGTCATTTG CGCGTTGT GCG GCCGCGCG TCTTCCCGCACCCTG 46 66 LT478_RS10890 2532695 .. 2532727 + -15.6 -3.53012 CTTCCGCCTTCTTCT CGA-TGCGGCCGTCC TCCG GGGCGGCCGCGGTCG TTTCGCGGCCCACAG 93 79 LT478_RS10915 NONE LT478_RS10920 2538032 .. 2538046 + -11.4 -3.25072 GAGCCTTGCGTAACG CCCTGC TCG GCAGGG TTCGCTTATGCTACG 69 84 LT478_RS10925 NONE LT478_RS10930 NONE LT478_RS10935 2541330 .. 2541348 + -10.2 -3.03159 ACGCGGCGCAGCAAC TCGGCGGC GTT GCGGCCGA TGTTGCCGGCGTTCA 62 236 LT478_RS10945 NONE LT478_RS10950 2543779 .. 2543792 + -3.8 -2.57683 CCGCCCAGGATGACC GGGA ACTCTA TCCC ATTCTGCGGCCATGT 40 178 LT478_RS10955 2546329 .. 2546353 + -10 -2.57132 CGCGGCCGCTGGCCA CGGCGC-TGGC GATG GCCACGCGCTG CTTCTGGCCGCCGGA 58 283 LT478_RS11000 NONE LT478_RS11005 2556157 .. 2556205 + -8.6 -2.83271 ATGCGCGATCATGAT GACCGTCTTGCTGCGCGTCAGC TCGGC GATGGCGCGCTGCAGGTCGCGC TCGTTCTCCGGGTCG 55 210 LT478_RS11030 NONE LT478_RS11035 NONE LT478_RS11040 NONE LT478_RS11045 2565207 .. 2565256 + -9.2 -3.33261 CGACGGCGGCGTCGA GGGCCTCCGCGTGCATGAGGCTC CGGTC GAGCAGCATGAGCGC-GATGCCC TTCTGGAGGTTCGCC 64 134 LT478_RS11055 NONE LT478_RS11060 2570268 .. 2570282 + -5.6 -2.90723 CGAACAGCACCGACA GCGTGG ACA CGACGC TCTCCTTCGCCATGA 47 513 LT478_RS11170 NONE LT478_RS11175 2602621 .. 2602631 + -5.4 -3.53012 ACGGACTTGTGGCGA CTTG GAG CAAG TTTCGCGCCGCGAAC 55 143 LT478_RS11200 2608090 .. 2608126 + -26 -3.63627 GCGACGATGCGGTTT CGAACGCTCGGCCTGC TTCAT GCGGGCCGAGCGTTCG TTTGCGCTCTACAGG 100 134 LT478_RS11220 NONE LT478_RS11225 2633527 .. 2633580 + -24.1 -2.52464 TGACGCGCCGTCGCA TCATCGCCCGAAAAACACGTTTTCG CCCG CGATTCCGTGTTTTTCGGGCGATGA TGCGTTCCGCAGCGC 100 98 LT478_RS11275 NONE LT478_RS11280 2645495 .. 2645505 + -6.8 -3.16564 CGGTCGCGACGTGGT CGAG GGG CTCG TTGGTGCCCTCGGGG 51 246 LT478_RS11345 NONE LT478_RS11350 2658721 .. 2658738 + -5.5 -3.53444 ACGGACGACCGAAAC GCGCCAA ATAC TTCGCGC TTTCAACGCACGTGC 55 62 LT478_RS11410 2670742 .. 2670753 + -5.8 -3.53012 CGCCGACGCGCCCGC CTCG TTTC CGAG TTTCGCCCGAAGCAC 55 98 LT478_RS11415 2672061 .. 2672085 + -9.2 -3.58343 CAGATGGTTTTCTCC TGCTCGGGCT CTTCC GGCCCGGGCG TTTCGGGCTGCTCGA 68 101 LT478_RS11445 2679551 .. 2679561 + -2.4 -4.1711 GCGGCGGACGGCTAC AGCG CCA CGCC TTTCTTCGGCATGCT 60 69 LT478_RS11465 2682286 .. 2682311 + -8.1 -3.76224 GATAGCGCGCTTGAC CGTGGCGGGCG ACAC CGACTGCCCCG TTTCCTCGGTCACGA 65 366 LT478_RS11475 2683507 .. 2683520 + -5.2 -2.94232 CGTTGCCGACATTTG GCGC GGGTAG GCGC ATTCTTTCGAGAAAG 45 16 LT478_RS11480 2684077 .. 2684089 + -4.7 -4.07568 CGAACAATCTCTAAT CCGAC TTT GACGG TTTTCACACGACCAA 64 202 LT478_RS11510 2690348 .. 2690378 + -19.8 -3.81146 CCTATATATAGGTAA GTGCCGCGCATCGT TTC AAGATGCGCGGCAC TTCTTCGTTCGAGGC 100 77 LT478_RS11540 2696620 .. 2696654 + -9.3 -3.14132 GAGCGAAGGCGGCAG GCTGTCATCCTGAGC AGCCA GATCAGGATGGCAAC TTGCTAGCAGCCAAG 61 56 LT478_RS11565 NONE LT478_RS11570 2703315 .. 2703333 + -6.7 -3.63991 TCCTGCGCGCTTCCG CTCG-CGC CCAG GCGTCGAG TTCTTCCAGCTGGTC 59 48 LT478_RS11605 2710335 .. 2710365 + -3.2 -3.4252 GGAGCCGCCGCCGAA CAG-GCGCTCGAG CATAGA CTCCTGCGCGCTG TTCTGCTGGGTCGAC 47 490 LT478_RS11615 NONE LT478_RS11620 NONE LT478_RS11625 2715234 .. 2715275 + -17.4 -3.6608 CGCTAAACGCGCCCC ACGCAACCGGCTATGCGCG ACGCA CG-GCGTAGCCGGTTGCGA TTTCCGTACGCTCCT 100 35 LT478_RS11630 NONE panB NONE panC NONE LT478_RS11645 2718778 .. 2718799 + -7.5 -4.25104 AAATTAGATATAAAA TTTGTTATA AATA TATAACAAA TTTTGCTAGGAGGCA 71 453 LT478_RS11650 NONE LT478_RS11655 2719757 .. 2719769 + -3.3 -3.65314 AAACGCGGCAACCGT GGGCA TCA TGCCG TTGTTCAGCGTTGGC 51 349 LT478_RS11665 2721933 .. 2721953 + -4.5 -3.07895 CGCTCGCCTATTCAT GCGCCCTGC GCA GCGCGGCGA TCTCTTCGGCGTAGC 46 54 LT478_RS11675 2723854 .. 2723873 + -3.5 -4.20918 ACATCGATGCCTGAG CGGTTGA CGAATC TCCACCG TTTGTTCGAGTTCGG 62 27 LT478_RS11705 2730534 .. 2730557 + -18.2 -5.00616 TTTTCGCTCCCCTGA GACGGCAGCC GCTT GGCTGCCGTC TTTTTTCGCAGCGCA 100 53 LT478_RS11710 2732771 .. 2732806 + -13.3 -4.39002 GAAAACAGCAGGTCA AGGAAGCGCGCTTCC CAACAA GGGAGCGCGCTTTCG TTTTGTCGCGCCTTT 100 189 LT478_RS11725 2738599 .. 2738616 + -14.1 -2.62184 TTCGCAAACACATTT CCCGGCC GAGC GGCCGGG TCGTGTGCGAAAGCG 72 60 LT478_RS11730 2740276 .. 2740300 + -10 -2.71144 CTTTCCCGTAAAGGA CAGCCGCCTT CTCGA AAGGAGGCTG TCCTTGGAACAGATC 61 103 LT478_RS11735 2741400 .. 2741436 + -23.1 -3.2614 TTTTGCGAGCGAAGA TG-GCGCCCCGCCGCC GCGAAA GGCGGCGGGGCGCACA TTCCTATGCGCAGTA 100 102 hdcA 2745134 .. 2745176 + -19.9 -3.53224 AACCGACGGTATCCC CCTGATCGAGCCGTCCAGG CAACC CCCGGGCGGCTCGATCACG TTTAGACAAGGACTG 100 39 LT478_RS11760 2746724 .. 2746749 + -17.5 -5.56568 TGCGATCGTCGCGAA GCCCGAGGCCG CTTA CGGCCCCGGGC TTTTTTTGGTCGTCT 100 53 LT478_RS11765 2748023 .. 2748045 + -5.4 -3.57144 ATGCATGCGCGCAGC CTGCTCGGGC TTA GCCTCGGCGG TTTGCGCGTAGCGGG 55 209 dtd 2749261 .. 2749272 + -7.2 -4.13767 TGAAGAAACGGCGCA GCGG CAGT CCGC TTTTCGCATGCCAAG 68 262 LT478_RS11785 2750683 .. 2750694 + -4.4 -3.30039 TCAAGCGAGGGGAAA GCTT TCGG AAGC TCTTCGTTGTCGATG 47 186 LT478_RS11795 NONE LT478_RS11800 NONE LT478_RS11805 NONE LT478_RS11810 2753791 .. 2753814 + -15.3 -3.02511 GCCACGCACTGATCG CGGCGCGGA CACGCC TCCGCGCCG TCTTCGAGGCATGAC 79 122 LT478_RS11820 2755130 .. 2755141 + -2.2 -3.56541 CAGAGCGGTGCACGC CTTG CATG CAGG TTCTGTAGTCGTCGT 49 80 LT478_RS11825 2756170 .. 2756185 + -6 -3.70773 CGCGCAACGCATAGT TGCCGC TTCG GCGGCC TTCTTCCATCTAGAA 60 184 LT478_RS11830 2757620 .. 2757652 + -21.3 -4.09739 CTCGAGACATCGAAA CGGGGGCTGTCCGAC ACT GTCGAGCAGCCCCCG TTTTCGCCGAGTTAG 100 54 LT478_RS11850 2762815 .. 2762829 + -11.4 -3.14132 TCCACACGAGCCGAA CAGCCC AGC GGGCTG TTCGTGCGAGCAGGA 69 198 LT478_RS11865 2766859 .. 2766879 + -3.8 -3.93695 ATCCTGCTACGCAGG CCCACGCG AACAA CGAGGGGG TTTCTACATGCTAGA 56 143 LT478_RS11870 NONE LT478_RS11875 2768262 .. 2768281 + -15 -3.4678 CCAATAGCAAAAGAA GGCCGGTC TTGC GACCGGCC TTCTCATATACGCGT 90 85 LT478_RS11900 NONE LT478_RS11905 2773495 .. 2773526 + -10.8 -3.53012 AAGAGGACTAACGCA TGAAAGCGACCCCCG ATC CGGGGGTCGCAG-CA TTTCCGAGCGGCAAA 70 30 LT478_RS11945 2781729 .. 2781753 + -22.9 -3.75153 TGTAGACGAACAAAA CGAGGGCGCCC GTC GGGCGCCCTCG TTTCCATTGAGCCGA 100 36 LT478_RS12035 2801918 .. 2801958 + -8.3 -3.40403 CGTCGAAGCGGTCGC CGCGAGCACGTCGAGAAG GCGCTA CGTC-CGACGTGCTCCTG TTCTGGTAGAAACGG 60 402 LT478_RS12105 2820359 .. 2820375 + -6.5 -3.27704 TGAATACGTCTTCGT CGGCG ACTTCAA CGCCG TTCACTTTGAGCGAT 56 244 LT478_RS12210 2843347 .. 2843364 + -9.9 -3.06796 ATCGGCCGGCACGCC GATCTGG TTCG CCAGATC TTCGATGCCGTCGGC 60 468 LT478_RS12220 2846164 .. 2846179 + -2.4 -2.55216 CGCGTAGATGTGCTT CGAGTG GGAC CGCACG GTGTTCTCGCTGATG 38 91 LT478_RS12235 2848521 .. 2848564 + -4.6 -3.03124 AATATTGACATAGCC GGG---CCGGGCCGTCCCGCGA GGAC TCGCCGG-CGGCTCGGAGGCCC TCTTCGGCCGTCGGC 46 121 LT478_RS12265 2854985 .. 2855001 + -11.5 -2.73483 GCATACAAGAGCCGC CGCCCCG ACA TGGGGCG TGGTTGAACTGCGCT 65 172 LT478_RS12270 2855649 .. 2855663 + -4.2 -4.37092 CCGTCACCAAAACGC CCGC ACCCAAC GCGG TTTTGTAACGAAACT 69 392 LT478_RS12285 2857470 .. 2857482 + -4.8 -3.29511 CCCACCGTGCGCACG CCGT ACAAC ACGG TTATCGCCCACTCGG 49 348 LT478_RS12310 NONE LT478_RS12315 NONE LT478_RS12320 NONE LT478_RS12325 NONE LT478_RS12330 NONE LT478_RS12335 NONE LT478_RS12340 2870522 .. 2870543 + -6.5 -4.08945 GCGACCGATGCCGCC CGGTCGACGG CGT CCG-CGAACG TTTTCGGACGCTCGT 68 220 LT478_RS12375 2881020 .. 2881036 + -2.9 -3.02511 TGTATACTCGGCCTT GACTGAA ACG TTCGGCC TGTTCACGAAATCGC 42 436 LT478_RS12395 2885316 .. 2885331 + -6.2 -4.258 CATGCCGAATGTTGT TGTTTC ACGT GAAACA TTTGTTCATGCATGG 68 134 LT478_RS12400 2886872 .. 2886889 + -14.1 -4.3586 AGCGCGTTTCCGAAA GCGGCCC TACG GGGCCGC TTTTGCTATCGCTCC 100 55 LT478_RS12425 2890547 .. 2890576 + -18.6 -4.07568 CCTTGGCATCCCAGC CGACGCGCGGCCC CTTGC GGGCCGCGCG-CG TTTTAGGGCAAGCCA 100 92 LT478_RS12430 2892274 .. 2892287 + -3.7 -3.11178 TGAGGATGGCCGACC CCGCG CCCC CGCCG TATTCGACTTCCTTG 45 219 LT478_RS12490 2907085 .. 2907096 + -3.6 -2.78798 TCTCAGCAAGCAGAA GGTG CCCT CGCC GTTTGAATGAGGCGT 41 4 LT478_RS12505 NONE LT478_RS12510 2912269 .. 2912299 + -2.6 -3.95986 GCAAAACGGGAAAAA GCGTGTCAAA CCCCCCGTCCC TTCGACACGC TTTCCTTCGGTTACA 54 110 LT478_RS12525 2915840 .. 2915859 + -2.8 -3.78934 GGCACGGCGTGAAGC GCATGTCGT CGC GCGGCA-GC TTCTTCTCGCCCGAA 54 425 LT478_RS12545 2923349 .. 2923359 + -6.8 -3.01712 TCGCCAGCACGATGT CGAG CCA CTCG TCTTGCAGCGGGAGA 50 231 LT478_RS12555 2925077 .. 2925105 + -20.4 -2.64803 GCGACGCTCGCACCC GCAAGGCCGCGT CCTGC ACGCGGCCTTGC TGCATTTCCGGATCC 95 62 LT478_RS12560 2925796 .. 2925808 + -6.2 -3.08464 AGCGAGCGGACGGGA GCGC ATGCC GCGC TTCCGTCCGTCGTAC 49 49 LT478_RS12565 2927693 .. 2927732 + -13 -3.9377 ACCCTTCCCTAGGAA GA-AGCGCCGCGCAG CCACCCCTCCC CTGCGCGGCGCTCTC TTTCCTTCCCGTTCT 86 29 LT478_RS12570 NONE LT478_RS12575 2929464 .. 2929476 + -4.7 -3.61001 ACGCCGCGTTGGAAC CCGCG CGC CGCAG TATCTTTTTATAACC 54 41 LT478_RS12585 NONE LT478_RS12590 2934244 .. 2934258 + -8.6 -2.78384 GGGAAATTCCGGCAG GAATCG ACG CGATTC TGTCATCGAGAAAGC 53 172 LT478_RS12605 2938051 .. 2938108 + -36.8 -2.79968 CCTGCTCCCGATTGC CGTTGTCGCCCGAAACGTGCGTTTTT TCGCTC AAAAGCGCACGTTTCGGGCGACAACG GTTTCGAGTTACCTC 100 101 LT478_RS12620 2941001 .. 2941059 + -12.5 -2.88737 TCACCTTCGTGGCGA TCTGCTTGATGGCCG-ACCGAGCGTTGCC CAT GGCGACGCTCGTTCCCGCCAT-GCGCAGG ATTTCGTAGTCGTTC 66 227 LT478_RS12630 2943195 .. 2943210 + -3.2 -3.5511 AGGAAAGTACCTTTT GGACAC CAGC GTGTAC TCTTTGTGCCTAGCA 49 39 LT478_RS12635 2945250 .. 2945284 + -14.3 -2.85364 GACGCACCTTCCTTA CGCCCTGGCCGTATA TTCCT TCTGCGGTCAGGGCG ATCTTTTGCTGATAT 79 55 LT478_RS12645 2947539 .. 2947562 + -10.3 -3.54919 TGCGCAGGGTACGCT GCTCGCCGCC GGAGA GGCGG-GAGC TTTCGGGCGATGCTT 69 238 LT478_RS12655 2951677 .. 2951702 + -5.5 -3.61398 AACGGTCGTCGTCCA CATGCAGCCGAT CGG AT-GTCTGCATG TTCTTGAACACGCGC 57 314 LT478_RS12680 2956928 .. 2956947 + -2.7 -3.92324 ACCAAGAAGAAGTGA GGGCGGG GTCGAG CTCGCGC TTTGCTCTTCGAACG 54 275 LT478_RS12700 2961559 .. 2961571 + -4.8 -4.09685 ACAACGCATCATCGC CCGT AAAAC ACGG TTTTCGCACCTGAGA 61 168 LT478_RS12715 NONE LT478_RS12720 2967944 .. 2967978 + -14.3 -2.94759 ACGCCGCTTGTGCGC CGCGGTCGGTGGCTT GGGCG AAGTCGTCGGCCGCG TCCTTCTTCGGCTTC 75 122 LT478_RS12775 NONE LT478_RS12780 2979841 .. 2979869 + -8.7 -3.96068 TGTCGCTGCCGATGA ACGCGCCGTCGCC GAT GGTGGTGGCGTGC TTCTTCTTGCCGTCG 72 288 raiA NONE LT478_RS12800 2984009 .. 2984038 + -25.1 -3.61517 CCTGCAAGCAGCACC GCGAAGGCCCGCC GATC GGCGGGCCTTCGC TTGTTCAGGGAGGGT 100 48 LT478_RS12810 2987532 .. 2987566 + -7.7 -2.59564 CCGGTCCAACGGATG GCGCGCGC-CAGCTTG CTGG CGGGCAGCGCGCGCGG ATTGTCGGGTGCCAC 50 207 LT478_RS12830 2992817 .. 2992852 + -16.2 -2.87132 TTACGCTGCGAAAAG GCCCCGCTATCGAAAG AAAC CTTTCGTTAACGGGGC TGTATGAGGCAAGGG 81 354 LT478_RS12850 NONE LT478_RS12855 2999847 .. 2999878 + -16.7 -3.01712 ACCGCCATCCGCTAC T-CGAAGGGGCGCC GCAGG GGCGCCCCTTCGCA TCTTCGAACGAAGGC 87 40 LT478_RS12860 NONE LT478_RS12865 3001840 .. 3001879 + -8.4 -3.53224 GAAGCGGTTCCTAAT GCCC-GCCGCCGGCCATCA TCT TCACGGCGTGCGGCAGGGC TTTCACCACGCCGTC 62 375 LT478_RS12880 3004550 .. 3004569 + -15 -3.60151 CCCGCTCATGAAGAA GGGCTGCC CAAA GGCAGCCC TTCTCGTTTCGCGAA 90 54 LT478_RS12970 3019768 .. 3019784 + -2.9 -2.62616 TCGAACCCGCGACCT TGGGATT AAA AGTCCCC TGCTCTACCAGCTGA 39 231 LT478_RS12985 3020489 .. 3020501 + -3.4 -2.95073 ATTGCACGAGAAAAG CTCT GGACG AGAG ATTTCGTATTCGGAA 42 51 LT478_RS12990 3021816 .. 3021847 + -26 -3.85165 AGCCCCTTCAAACCA CGGAGGCTCCGTCG CACA CGACGGAGCCTCCG TTTGCATTTGGAATC 100 111 LT478_RS13045 3036923 .. 3036961 + -24.6 -3.49951 CCTGCCCCCTCCCTC AACGCCGGAAGGCTCCCG CTC CGGGAGCCTTCCGGCGCA TTCTCTACCGATCTA 100 46 LT478_RS13100 NONE LT478_RS13105 NONE LT478_RS13110 3050533 .. 3050543 + -2.4 -4.07618 ATCGATGTCGATAAG GCGC ACT GCGG TTTCCTTCTTCGACC 58 506 LT478_RS13125 3053125 .. 3053138 + -6.7 -3.61715 AGCGAGGGTTCGCAG GATCG GGCT CGATC TTCTTGCGAAGCGTG 59 170 LT478_RS13170 3065620 .. 3065634 + -10 -3.17051 CCCGCCCGCAGGCGC TGACCG CCT CGGTCA TCTTGATGATCGAGA 65 261 LT478_RS13180 3066751 .. 3066763 + -6.2 -3.49653 GTCGGCTGAACGGAG CCGG GAAAG CCGG TTGTCTGCAGGTGGT 55 32 LT478_RS13195 3073423 .. 3073452 + -14.3 -2.61199 GTTTCTCCAACGCGA ATGCGGGCGTTTC GCAT GAAACGCCCGCGA GTTGCTTGCCGGTTG 76 62 LT478_RS13245 3084190 .. 3084214 + -15.8 -4.81685 TCTGATTTGCTTCCT CGCCTTCGAC ACTCC GTCGAAGGCG TTTTTGCTGCTTGCT 100 108 LT478_RS13250 3085154 .. 3085181 + -17.1 -3.72576 CCTCAAACACGCAAA TCCGGGATCGC CCGATC GCGATCCCGGA TTTGATAGCGAGCGC 100 44 LT478_RS13260 NONE LT478_RS13265 NONE LT478_RS13270 3087286 .. 3087298 + -5.5 -3.61089 GTCGCAGTGCTTCAT GAGCG GAG CGTTC TTGTCCTTGTTGACG 57 176 LT478_RS13295 3093113 .. 3093148 + -14.7 -4.07687 CATGATCTACCGGTA ACGTCCTGAAGGGGG TCGCCC CCCCCCTCAGGACGG TTTTGCGAACGACCT 95 25 LT478_RS13335 3104503 .. 3104532 + -17.3 -5.5208 TCGAGCATGCGAGAA CGTCCTGGAA-GGG AAT CCCATTCCAGGACG TTTTTTCTATTGTGA 100 61 LT478_RS13350 3108777 .. 3108787 + -3.2 -3.27525 CATCGCCCGCCCTTT GTGA AGG TCGC TTGGGTTTCGCACAC 47 274 LT478_RS13355 3110056 .. 3110113 + -44.7 -3.74747 ACCACGTCCCTCTGC CATCGATCACCAAACGAAACGGGCGCC CGAA GGCGCCCGTTTCGTTTGGTGATCGATG TTTCCTACCGCTTGG 100 77 LT478_RS13370 3113526 .. 3113540 + -7.1 -3.18264 ACCCAGGTCAGCAGT GCGCT CGGCA AGCGC TTCGTAGCTACCGCC 54 247 LT478_RS13410 NONE LT478_RS13415 3123576 .. 3123592 + -8.7 -3.21099 CCTCCAGCATATCGT CCTCGTC GGC GATGAGG TTCATCGTGCGGCCG 59 379 LT478_RS13440 3130292 .. 3130322 + -18.3 -3.27525 TTACATCGCCGCATA CGGCGCGCTGCGGC ACTT GCC-CGGCGCGCCG TTGCATTTCCGACGC 95 221 LT478_RS13445 3131906 .. 3131957 + -11.3 -3.4052 GTGCTGTAGCTCCCA CTGCGCCG-CCTGCTCGCTCGCGC AGGCG GCGCATACGCGCGGGTCGGCGCCG TTCGTTGGGTTACGG 72 32 LT478_RS13450 3132442 .. 3132477 + -21.2 -3.90112 GGATCGCAACCACCT GCAAGCGGCACCGTCG GTTT CGGCGGTGCCGCTTTC TTTGGTTCGAGAGCG 100 46 LT478_RS13455 NONE LT478_RS13460 3134347 .. 3134382 + -15.4 -2.50074 CCGCCGAAGCGATTC GAGAGCCGTGGGGAGT TAGA GCTCCCTGCGGCTCGC CTCTATTATACGAAC 78 522 LT478_RS13520 3148534 .. 3148566 + -27.9 -2.52464 TTCGCCCCCCTACCA GAACGCCCCCGGATG CAG CATCCGGGGGCGTTC TCGATTGAGCGGGAA 100 77 LT478_RS13535 NONE LT478_RS13540 NONE LT478_RS13545 3154498 .. 3154546 + -16.8 -3.61398 CTGGCGCTGCTGTAA CACGATAAAAGCCCCGGCTCGCT TTAC AGCGAGCCGGGGCTTC-GTTGCG TTCTTAGCACGAGCG 100 26 LT478_RS13570 3160924 .. 3160937 + -5.9 -4.20531 TTCCCGCTTCGGGTG GGGTG CGCG CGCCC TTTTGCGTCCGTATG 68 127 LT478_RS13575 3162602 .. 3162639 + -20.7 -3.85698 CGCCTAGCATCTGCG CGATGCGGCGTGCCGACC CCC GCTCG-CACGCCGCATCG TTTGTCGCCCGAAAG 100 34 LT478_RS13610 NONE LT478_RS13615 3167655 .. 3167681 + -3.7 -2.70932 GCGGCCCAGGTGCCC CTGC-ACAGGTT TCCG AGCCTGTTGCCG TAGTTGCCAAAAGAG 41 47 LT478_RS13620 NONE LT478_RS13625 3172219 .. 3172231 + -4.7 -3.35679 CAGCACGATGGAGAT GACGC GCA GCGCC TTCTGGCTGCCCGAG 51 507 LT478_RS13670 3180851 .. 3180896 + -9.8 -3.29471 GGGTTTTCGTTGCGC GCGAGCGGTCTTTCGTTCGCAA GGAG TTGCGGACGGGCG-CCG-TCGC TTCGTATGCTAGGCG 68 47 LT478_RS13675 NONE LT478_RS13700 3184617 .. 3184654 + -7.9 -2.8474 AAGATGGAGAGATCA TCCTG-AAGTTGCTTAGC GGT GCTAAGCAACTTGCAAAA TAATTGTACATGGCC 55 91 LT478_RS13705 3186476 .. 3186505 + -20.9 -3.89055 CCTATTAGGTTTTAT GAGAAAGGGAGGC TCGC GCCTCCCTTTCTC TTTCTCCACCTCTAT 100 50 LT478_RS13725 3190239 .. 3190289 + -8.19999 -2.71712 CGAGCGCACTCCATG TC-GAAC-GACA-GCGGGCCCGCGC GATG GCGCGGGCCCGCATGGCAGAACCGG GTTTCGGCGAGGACG 53 69 LT478_RS13735 3193512 .. 3193530 + -3.8 -4.28762 GCCGTGCCGCCATGC TCGTCG ATGACCA CGGCGA TTTTCGTGCGCTTCT 66 449 mscL 3211587 .. 3211603 + -2.1 -3.57263 CCGGCGATCAGCGAT GCCGCCA GGA TAGCCGC TTTCGCCATGGCGAT 50 111 LT478_RS13860 3227893 .. 3227922 + -13.5 -3.6422 CTGCTTTCGAGTCTC GCCGCGCGCAGCT TTTC AGCTGCGCGCTCC TGTTTTCAAGCCGTC 88 120 LT478_RS13865 3228991 .. 3229023 + -9.9 -3.87364 AAGATGTCCTCCGAT GG-GGTCGGGCG AGAAGGCGAC CGCCCGACCACC TTCTCTTCTTCTACA 78 125 LT478_RS13915 3239880 .. 3239909 + -4.2 -5.28176 GATGCCGTTGCCGTT GCGCACCGCCACG CTGCC CGTG-CGCTTCGC TTTTTTCTGCGTGCC 93 346 LT478_RS13930 3245186 .. 3245199 + -2.3 -4.01135 CTTCTGCCGCTCGCC GGACG AAGG CCTCC TTTGATCTTCTTCGG 57 47 LT478_RS13935 NONE LT478_RS13940 3246829 .. 3246860 + -17.4 -4.87133 CTCCAGAAAAAGAAT GCAGGTCAGGCGAT GAGA GTTGCCTGACCTGC TTTTGTTTCCGGAGT 100 36 LT478_RS13950 3249137 .. 3249151 + -5.6 -3.27525 GCCAGAGCAATCTGC CGACCG CTG CGTTCG TTGCGTTTGAACGGG 52 81 LT478_RS13955 3249599 .. 3249614 + -3.2 -4.05788 ACCGATGGGACTCTT CGAAAG AGGT CGTTCG TTTCGTTTGAAGGGG 59 112 LT478_RS13960 3250586 .. 3250614 + -16 -3.29704 TGAGCGACTTTGAAT CCGCGCGAAGCC CCAAC GGCTTCGCGCGC TATCTTTACTCGCGA 89 38 LT478_RS13965 3251643 .. 3251657 + -2.7 -2.79878 CCCCGCTTCGGCGTA GGGAC CGGAC GCCCC CTTTGCGTGCCTCGC 39 25 LT478_RS13970 3252263 .. 3252278 + -3.2 -3.37654 GTCATCCCGAGCGAG CGGCGCC CAG GG-GCTG TTGATGGTTTCTTGA 47 49 LT478_RS13975 NONE LT478_RS13980 NONE LT478_RS13985 3255562 .. 3255600 + -5.2 -3.05384 GAGCGCCACTCCGTC ACGGGATCGTGCTCCGG CGGTGA CCTGGGCGC-ATCCCGC TTCCCTCCGCACGCG 46 50 uvsE 3257080 .. 3257091 + -2.2 -3.91412 TTGGGCAAACACCGC CGAG TAGG TTCG TTTATAACGTGTAGT 54 179 LT478_RS13995 3257628 .. 3257681 + -10.4 -3.28712 ACGCAACCGACTTCC GGCGCGCAGCCGCCGACGAATGTTTC ACGT GCAACATTCGTACGT-GCTGC-CGCC TTCTCAAGAAAGGAG 68 40 LT478_RS14000 3258542 .. 3258572 + -14 -5.19328 TCCATAAAGCATTTG AGAGCGGCCTGCAT TTG ATGCGGGTCGCTCG TTTTTGTTGTCACGT 100 52 LT478_RS14005 3260254 .. 3260283 + -4.1 -3.51232 GCGGCCTGCGCGGAC GTCGC-CGCGGTCG AGA CGAACTCGCGCGCC TTGGTTTCGAACGCC 51 380 LT478_RS14020 3265255 .. 3265312 + -27.3 -3.53224 GCCGCTCTGCGAGCC CATCTTCGCCCGAAAAACACGCCACAG AGGG CTAATGCGTGTTTTTCGGGCGAAGATG TTTCCCGGCGAGGTC 100 45 LT478_RS14025 3266364 .. 3266389 + -9.1 -3.54459 CCTGCCGAGCTCTGT TCCGTTGTTTC ACGT GAAACAACGCA TTTCGAGAAGCTTCG 66 68 LT478_RS14030 3268958 .. 3268969 + -5.8 -2.62735 TGTCTGATCCTTGCA TGCG AAGG CGCA TGGTGTCCACCATCT 45 476 LT478_RS14065 NONE LT478_RS14070 3280351 .. 3280391 + -15.9 -3.14344 GCACGGGCTGAACTA GCCGCCAACGCGCCGCCGC CCA GCGGCGGCGCGAAGCTGCC TTCGTACCGGCGCTC 85 25 LT478_RS14090 3284026 .. 3284042 + -3.7 -5.0916 GCGCCCTTCCGAACA TCATCCT CAG AGGATTA TTTTTCTATTACCCC 80 178 LT478_RS14095 3285957 .. 3285971 + -7 -3.31144 GCACGACCTGGGTCA CGCTCC GCA GGCGCG TTCTCACGATCCCGA 56 106 LT478_RS14100 NONE LT478_RS14105 NONE LT478_RS14110 NONE LT478_RS14115 NONE pknB 3294530 .. 3294553 + -18.2 -5.28778 GAACTAGGAATCTCC GCGATGCGCC TTCG GGCGCATCGC TTTTTTATGCGTCCT 100 34 LT478_RS14125 3294879 .. 3294891 + -3.3 -4.03234 CATTGAAAGATCGTT CCAGC TTG GCTCG TTTCTCTCAAACAGC 58 202 LT478_RS14220 3316020 .. 3316057 + -25.9 -3.65812 CCTGATCAGCAATGC GAAGCCCCTGATGTTTC ACGT GAAACATCAGGGGCTTC TTCTGTTCACAGCGG 100 106 LT478_RS14245 NONE LT478_RS14250 3323050 .. 3323065 + -6.2 -3.794 CGGCGAAGGCACGAA TGTTTC ACGT GAAACA TTTCATGACTTGAAA 60 92 LT478_RS14255 3324148 .. 3324181 + -26.9 -3.04322 ATCGGCGCCGCAACA CGTAAACGGCCCGGC AAAT GCCGGGCCGTTTACG TGTTGCGACCTTGCG 100 130 LT478_RS14305 3334519 .. 3334547 + -7.3 -2.71144 GATCCACATCCACCA CCCGCTTGCCG CAGATCT CGGCGGGCGCG TAGTTCGGCACGATC 51 274 galE 3337872 .. 3337882 + -2.4 -3.85864 AGACCGAATCCTCGA CGCG GCC CTCG TTCTTCTCGTCGTAC 54 39 LT478_RS14340 NONE LT478_RS14345 NONE LT478_RS14350 3346688 .. 3346708 + -6.7 -3.96148 GAAGGCGTGTAACCC CCTTGCAGG TTG CCCGCACGG TTTATAATGGGAGAG 65 139 LT478_RS14355 3347147 .. 3347157 + -6.8 -3.63627 ACCGGCTCTTGCAAA GCCT CGA AGGC TTTAACATGTACGGC 60 67 LT478_RS14365 3349874 .. 3349902 + -16.7 -3.27784 GCCTAGCGCCTGCCT CCGCCCGGCCC CATCTGC GGGTCGGGCGG TCTCTTCTCTTCCAT 93 35 LT478_RS14370 3350563 .. 3350582 + -3.4 -4.2349 AGACCACGCCAGCGA CCGAAAGC TCAG GCCTGCGG TTTTCGCTCTCCCCC 62 174 LT478_RS14375 3351415 .. 3351440 + -11.1 -4.12279 GCATCCGTCATCACG GGCCGCCGG-CT GCA GGATCGGCGGCC TTTCCTTTGCCTTTC 84 51 LT478_RS14380 3352165 .. 3352191 + -21.6 -4.84527 CCTTCGAGGGGATAA GCCCTCCGGCCC AAT GGGTCGGAGGGC TTTTTACTGTCTAGG 100 53 LT478_RS14390 NONE LT478_RS14395 NONE LT478_RS14400 3355220 .. 3355238 + -9 -3.53012 GTGCGTTGTTTAGAA TAGTAAAG CAT CTTTACTA TTTGAAAGGAGAGAC 66 91 LT478_RS14405 3355727 .. 3355746 + -7.8 -3.62775 CAACTAAGCGCATCC TGGACACC TTTG GGTGCCCA TTCTTCGACCCTAAT 64 34 LT478_RS14410 NONE LT478_RS14415 3357502 .. 3357530 + -14.5 -2.72511 TTTCCAGATAGATGA AGGGAGGGAGCAC ATT GCGCTCCCTCCCC GTTTACAAGACTGAA 77 26 LT478_RS14475 3372751 .. 3372762 + -4.4 -2.58999 AAGACCAAGCGTAAA CGAT AAGT ATCG CTTGATGTATGCGGA 43 27 LT478_RS14495 3376936 .. 3376969 + -9.7 -4.43879 ATAGGCACAAATTGC CTGTTTTCGTTGCAA TCAC TTGAAACGAAAACTG TTTTCGTTGCATAAT 84 210 LT478_RS14500 3378387 .. 3378405 + -17.4 -3.52919 GGCATAATCGTGGGG CGCGGCCG TGG CGGCCGCG TTATGATTCGCTCGT 100 145 LT478_RS14510 3379930 .. 3379947 + -3.3 -2.78438 ATCCGTAGCGGCGTG GGTCGGC ATAG GTCGACG GTTTCCCGTATAATG 41 59 LT478_RS14515 NONE LT478_RS14520 3381205 .. 3381216 + -4.4 -2.58999 AAGACCAAGCGTAAA CGAT AAGT ATCG CTTGATGTATGCGGA 43 27 LT478_RS14550 3386110 .. 3386130 + -5.3 -3.01712 TTCGCACGATCACTC TCGGGGCGA TCC TCGTCGCGG TATTCGCAGGCGCGA 49 76 LT478_RS14555 NONE LT478_RS14560 3388211 .. 3388230 + -2 -3.54424 ATTCAGCCTTACTGC GGCTTTTG GAGA CAACTGCC TTTGAGAAAATCAGC 47 119 LT478_RS14565 3388907 .. 3388931 + -5.5 -3.53012 AAGTCTGCGATTCGC CGTCTCGCATC GTT GAGGCGCGTCG TTTGACCAACCAACA 55 241 LT478_RS14570 NONE LT478_RS14575 3391140 .. 3391171 + -14.4 -3.39895 CTGCAAGAGAAAAAT CGAAGGGCACCGAC AAAC GCCGATGCCCTTCG TTGATTGCTGGAGCG 86 484 LT478_RS14640 3404717 .. 3404753 + -5.2 -4.07568 TTCGCCGTCTGCGCA AGGTTGCCCATCTTGTC CGAT GATAAGA-GGGCGATCG TTTTCGGAAAGGGGG 64 503 LT478_RS14650 NONE LT478_RS14655 3418631 .. 3418645 + -6.4 -2.75064 GCAAAGAGAGTGGGG CTTCGA TGA TCGGAG TGCTTGGGTCGAGCG 50 17 LT478_RS14660 NONE LT478_RS14665 NONE LT478_RS14670 NONE LT478_RS14675 3423277 .. 3423291 + -6.4 -2.70932 TGCACGGCGGCAAGC TCGGTT TGC GACCGA TCCTTGAACGAGCGC 48 468 LT478_RS14700 3428824 .. 3428834 + -8.2 -2.64099 TGAAAGGGCTTCCGA CGCC GTA GGCG CTTCTCCTGCACGCA 53 66 LT478_RS14760 3441713 .. 3441744 + -8.8 -5.10029 AAACCTTCGGGTTTT GTATGGGCCAATCCC GCT GGGATTGGCTC-TAG TTTTTTGGGCTTGGT 100 64 LT478_RS14765 3442984 .. 3443010 + -8.7 -3.21276 CGTGGCTGCCCGACC CGC-CGACGAAG CGCA CCTCGTCGCGCG TGTTCTGGGCGAACG 59 242 LT478_RS14800 3451013 .. 3451027 + -3.4 -3.74693 CGCCGCCTCGGCGAT GGCCTC GAT GGTGCC TTTCCTGGCATCAGC 54 175 LT478_RS14805 3451747 .. 3451763 + -10.1 -2.82623 CGGGGATTTCGCGCT CGCCGAG TTC TTCGGCG TCCTTCTCGCGGCAC 60 103 LT478_RS14830 NONE LT478_RS14835 3459416 .. 3459448 + -11.1 -3.59979 TACGAGAAAACGGAA CGTCCGGACGGGCGG CAC CCGGGCGCCCGGATG TTTCACGTGAAACAC 77 356 LT478_RS14865 3467766 .. 3467792 + -9.4 -3.17527 CCGAGCCTAGCGGGC CGGC-GCGGCG CCCTCT TGCCGCTGCCG TCTTGCTCGTGCATC 61 31 LT478_RS14880 3471909 .. 3471957 + -4.4 -4.27617 GATCGTTGCCAAAAG TATACGAACACCAGCCGATCTC AGCAA GAGTTCGGCAAGCGGTCGCATA TTTTCCTCCGATCTC 65 199 LT478_RS14885 3473485 .. 3473498 + -9.5 -3.53012 AGGCGTAAATCAGAC GCGCC ACCC GGCGC TTTGCGCAGAACACG 66 33 LT478_RS14890 NONE LT478_RS14895 NONE LT478_RS14900 NONE LT478_RS14905 NONE LT478_RS14910 NONE LT478_RS14915 NONE LT478_RS14920 3481320 .. 3481370 + -8.9 -3.66921 GGCGCGAAGTAGAAG GATCCCGTGCGGCGCCAGCCG CAGCACTCC CTGTTAACGCAGCACGGGATC TTTCGACTTCGGCTT 68 155 LT478_RS14925 NONE LT478_RS14930 3483377 .. 3483399 + -16.2 -3.61356 ATGCCCTGGAGAGAG GCGGCCCCCC TTC GGGTGGCCGC TTTCGCCTCCGTGAT 93 271 LT478_RS14935 NONE LT478_RS14940 NONE LT478_RS14945 3485876 .. 3485893 + -12.7 -4.3129 TAATGCAAAAAAAAA GGACGGC TAAA GCCGTCC TTTTCGTCATCAGTG 100 354 LT478_RS14970 3494610 .. 3494651 + -13.9 -4.20516 GCGTTCTAGTCTTTC TTCAGGAGTGGAATGTTTC ACGT GAAACATTCCACTCCTCCG TTTATTAACTGAGGG 100 32 rlmN 3496774 .. 3496813 + -26.8 -4.10453 CGTATACAAAAATAA GAAAGCCCGGAATGTTTC ACGT GAAACATTCCGGGCTTTC TTTTGGGAACCTTTC 100 99 LT478_RS14995 3499638 .. 3499692 + -19.7 -4.56597 TCCGCGTAAGGTTAG CGCTAGATTCTAATGCAGAATGTTTC ACGT GAAACATTCTGCATTAGAG-CGGGCG TTTTTGCGCGAAACC 100 160 LT478_RS15030 NONE rpmH NONE rnpA NONE yidD NONE LT478_RS15010 NONE LT478_RS15005 3500699 .. 3500730 - -11.6 -4.93696 GTGAAACACTAAAAA CAAAAACCCGCACC TTTC GATGCGGGTTTGCG GCTAAACCGAGACTT 100 47 rsmG 3499655 .. 3499676 - -10.3 -2.54523 CTAGATTCTAATGCA GAATGTTTC ACGT GAAACATTC TGCATTAGAGCGGGC 60 30 LT478_RS14990 NONE LT478_RS14985 3496771 .. 3496816 - -25.1 -4.99638 ATACGTATACAAAAA TAAGAAAGCCCGGAATGTTTC ACGT GAAACATTCCGGGCTTTCTTT TGGGAACCTTTCGAC 100 43 LT478_RS14975 3494321 .. 3494331 - -2.4 -2.63382 TTTCATAGCTACAAC GGCG CAG CGTC TTTCCGATGGCGTGC 38 350 LT478_RS14965 NONE LT478_RS14960 NONE LT478_RS14955 3486189 .. 3486203 - -4.9 -4.60041 AGGCAGGCTGAAAAA CGCCC GCCGA GGACG GATAGGGGCACCTAT 73 37 LT478_RS14950 3485876 .. 3485893 - -12.7 -6.15259 TAATGCAAAAAAAAA GGACGGC TAAA GCCGTCC TTTTCGTCATCAGTG 100 50 LT478_RS14875 3469730 .. 3469748 - -3.8 -3.71527 TGGGAAGGAGGTAAA CCGTCGG AGCCCG CCG-CGG TCCTAGGGCACGATC 54 28 LT478_RS14870 3467740 .. 3467780 - -13.3 -3.09516 CGCGTGACCATGGAA GAGGAAGCCGC-CCGAGCC TAGCG GGC-CGGCGCGGCGCCCTC TTGCCGCTGCCGTCT 76 172 LT478_RS14860 NONE LT478_RS14855 3462466 .. 3462488 - -9.8 -3.05384 TGTTCCGGCACCGAA CGCGCCGGAT CGA ATCCGAAGCG CTACTGCTCGCTGGC 64 26 LT478_RS14850 NONE LT478_RS14845 NONE LT478_RS14840 3459411 .. 3459453 - -10.4 -4.4648 ATCCTTACGAGAAAA CGGAACGTCCGGACGGGCGG CAC CCGGGCGCCCGGATGTTTCA CGTGAAACACTCCCA 89 61 LT478_RS14825 NONE LT478_RS14820 3454917 .. 3454946 - -21.5 -4.07568 TGCCCCCTTCCAAAA CCGAAGGCGGCCC CGCA GAGCCGCCTTCGG TTTTCGTTTCTCTCC 100 202 LT478_RS14815 NONE LT478_RS14810 3451377 .. 3451390 - -2.3 -3.53012 GGGCTTTCGCTCAAA GCGAC GAGG GTCGT TCGGTAGAGTTCTTC 47 356 LT478_RS14795 NONE LT478_RS14790 3445297 .. 3445328 - -12.2 -4.07568 CCCCCTTCGCGAAAA GGAATGCCCCGGCG TTGC CGCCAAGGCGCTCC ATCGACCGATTCCGG 89 85 LT478_RS14785 NONE LT478_RS14780 3443606 .. 3443619 - -4.5 -4.31433 CACTCCGACAAGAAA GACAC GCTC GCGTC GCTGGGCCAAGCCGA 68 476 LT478_RS14770 3442513 .. 3442532 - -4.8 -3.34398 GTTGTTCGGGAAACA GGGGGGCG GGAT CGCCTCTC CTCTCTGTACTGCCC 51 223 LT478_RS14755 3439539 .. 3439552 - -3.1 -3.55622 CGCAACCCGCCGAAA GAAAG ATCA CCTTC CCCTGTCGGGCGCTC 49 18 LT478_RS14750 NONE LT478_RS14745 NONE LT478_RS14740 NONE LT478_RS14735 NONE LT478_RS14730 NONE LT478_RS14725 NONE LT478_RS14720 3433095 .. 3433112 - -8.3 -3.53343 AAGCGGGCGCGTAAA GCGCCCC GCGC GCGGCGC GGGCAATGTGTTCGT 62 69 LT478_RS14715 NONE LT478_RS14710 3430294 .. 3430304 - -2.4 -3.28712 CCGCCTTTTGGAGAA GCGC CGC GCGG TCGAGGGTCTTCACG 44 100 LT478_RS14705 3428787 .. 3428803 - -2.9 -3.87373 GAGATTTCTTAGAAA GAGCACG CCC CATACCC CATAATGAAAGGGCT 54 2 LT478_RS14695 NONE LT478_RS14690 NONE LT478_RS14685 NONE LT478_RS14680 3422818 .. 3422840 - -7 -3.4811 CGCTGCACAACAACA GACAATCCAG CGT CTAGATCGCC ACACTAACCCTCGAA 58 29 LT478_RS14645 3404124 .. 3404141 - -7.7 -4.56597 CCGCTTTGGCAAAAA CGGTCAA ACTC CTGACCG AAGAAGAAAGCCTGA 81 124 LT478_RS14635 NONE LT478_RS14630 3399861 .. 3399872 - -2.2 -3.16783 CACTTAATTCAAAAT CCGA CCCG TCGA CGACTGAAGCTCCAC 43 2 LT478_RS14625 NONE metK 3398073 .. 3398086 - -5.3 -2.93089 CATTATCGTAAATCA TGGAA CTCC TTCCA AGGGGGTGCTAGCCC 48 42 cysK NONE ahcY 3395816 .. 3395831 - -4.8 -2.52635 ACCCCTAGTATGAAC TATACA CCCT TGTATA CACTTTAAAAGTTCC 42 30 LT478_RS14605 3394939 .. 3394954 - -6.2 -3.81574 CAAGAAAGAAATGAA TTGCAT TATG ATGCAA AGAGCCAAGCGATAG 60 146 LT478_RS14600 3393585 .. 3393624 - -12.7 -3.1855 CGTTTCAATATGTAA CTGCGGCCGAGAGTCGG GGTCGT CCGACCCGCGGCCGCCT GAAACGCCGCTTCCG 74 200 LT478_RS14590 3392533 .. 3392545 - -5.5 -3.01712 TGTTGCGGGCGAACA CCGTC CGC GACAG CTTCTTGCGCCCCAT 49 141 LT478_RS14585 3391337 .. 3391353 - -3.5 -3.1012 AAAGTTCCAAAACTA TGCGGCC TGC GGCAGCG ATTCGAGCCGTGAGA 43 6 LT478_RS14580 3391139 .. 3391172 - -15.3 -5.0916 TCTGCAAGAGAAAAA TCGAAGGGCACCGAC AAAC GCCGATGCCCTTCGT TGATTGCTGGAGCGG 100 32 LT478_RS14545 NONE LT478_RS14540 NONE LT478_RS14535 NONE LT478_RS14530 3381580 .. 3381603 - -6 -4.07568 TTCTGTGTCCGAAAA CTTGACACAG GTCA CTCTGCCAAG CCGACCGCGCTTTCC 65 13 LT478_RS14490 3374041 .. 3374069 - -3.8 -3.71378 CAGGCGACATCGAAA TAGTTACGCAAG TGGCT CCAGCGTGACTA CGTGCTGGCCGGCGA 54 0 LT478_RS14485 3373089 .. 3373122 - -15.5 -2.63703 ATAAGGATTTACAAG TGGCCGCATAAATAT CTCG ATATTTATGCGGCCG AAAACTTGACACAGG 78 63 LT478_RS14470 3371382 .. 3371413 - -16.6 -3.54424 GCGCATGCGCGGAAA GGCGAGGC-CGACCG TGC CGGTCGCACCCCGCC CTTGGCATCGACGTA 100 49 LT478_RS14465 NONE LT478_RS14460 NONE LT478_RS14455 NONE LT478_RS14450 NONE LT478_RS14445 NONE LT478_RS14440 NONE LT478_RS14435 NONE LT478_RS14430 NONE LT478_RS14425 NONE LT478_RS14420 3357503 .. 3357529 - -20.2 -3.35197 TTCCAGATAGATGAA GGGAGGGAGCAC ATT GCGCTCCCTCCC CGTTTACAAGACTGA 100 62 LT478_RS14385 3352165 .. 3352191 - -19.4 -3.32844 CCTTCGAGGGGATAA GCCCTCCGGCCC AAT GGGTCGGAGGGC TTTTTACTGTCTAGG 95 36 LT478_RS14360 3347115 .. 3347139 - -14.3 -3.65996 GCCTAGATATAAATA GAGCCAGTCCC AGT AGGACCGGCTC TTGCAAAGCCTCGAA 90 72 LT478_RS14335 NONE LT478_RS14330 3341916 .. 3341926 - -8.2 -4.35461 GCAACATCACGAAAA CGCG CCT CGCG CTCATGGTGAGCATA 77 235 LT478_RS14325 3339834 .. 3339859 - -12.6 -4.7373 GGAGCCGATTAAAAA GCGGCATCGA TCGAAG CCGATGCCGC TTGCGCAGTTCGAGG 100 59 LT478_RS14320 3337699 .. 3337722 - -13.8 -3.29471 GCCCTACCAGATCAA GCCGCGTCGC GCGG GCGACGTGGC CGTGAACTACGCGGC 78 158 LT478_RS14310 3334275 .. 3334302 - -9.1 -3.97088 TCGGAGAATAGGAAA CGCCCCGAAAGC TCGAT GCCC-CGGGGCG TTCTGCGTACAAATG 73 72 LT478_RS14300 3333424 .. 3333446 - -5.6 -2.61383 ATGGCCACCGAGAAG CGCATGAG ATCGTTG CTCATACG TGCGGCGCCTACACG 46 34 nikR 3332946 .. 3332963 - -4.1 -4.29326 GGGAAAGCGAACAAA TGGCG AGACCGGG CGCCA CGGGAAGCCGCAGCG 65 83 hypE 3331549 .. 3331565 - -6.5 -3.53012 TCCTTCTCGTCTAAA GCATTCC GAC GGGATGC GTCGGGTCACTTCCC 58 232 LT478_RS14285 3331271 .. 3331302 - -14.5 -3.75153 TTTCCCGAACGCAAA GAACCCCCGCCTC ATGAAA GAGACAGGGGTTC TCGTTGCGCTTGTCG 93 61 dnaK NONE LT478_RS14275 3328287 .. 3328312 - -7.6 -4.58773 TCGAGTAAACCAAAA GCGGGC-A-GCC TCTT GGCCTTGCCCGC TCTGGTCGTTTGCTT 81 41 LT478_RS14270 NONE LT478_RS14265 NONE clpB 3324148 .. 3324181 - -26.9 -3.01791 ATCGGCGCCGCAACA CGTAAACGGCCCGGC AAAT GCCGGGCCGTTTACG TGTTGCGACCTTGCG 100 70 LT478_RS14240 NONE LT478_RS14235 3317430 .. 3317441 - -2.2 -2.69647 AACAAAGCTACAGCA TCAG ATCG CCGA CGGCTTTGACGCGGA 39 6 LT478_RS14230 3317006 .. 3317020 - -5.6 -3.79251 TATCTCATGATCAAA GCGCCT TGC ACGCGC CCAGTTGGAACGATG 60 62 LT478_RS14225 3316018 .. 3316059 - -18.9 -2.52516 GCCCTGATCAGCAAT GCGAAGCCCCTGATGTTTC ACGT GAAACATCAGGGGCTTCTT CTGTTCACAGCGGCG 88 76 LT478_RS14215 NONE LT478_RS14210 NONE LT478_RS14205 3312002 .. 3312018 - -5.1 -3.18264 CCTTCGAGTCACGAA CAGCG CGCCTAC CGCTG CCGTTCCCTCAGCCA 48 17 rsgA 3310842 .. 3310854 - -4.1 -3.33744 TGCGTTCGGAAAAAT TCGCA GCG TGCAA GCACCGTAGCATAAT 47 149 LT478_RS14195 NONE LT478_RS14190 3308350 .. 3308366 - -3.7 -3.40674 TTATCATGCAAAAAT GTTAACA CCG TGTTCAC TTTTTTGCAAGCTTG 47 76 LT478_RS14185 NONE LT478_RS14180 3306784 .. 3306817 - -4 -5.00616 TTTTGCGTTAAAAAA TTCTTAACC-GCG TATTAACGC CGCTGGTCAAGAA GCATTTTTTACTGCT 77 19 LT478_RS14175 NONE LT478_RS14170 3303334 .. 3303356 - -9.1 -4.56597 TCTTCGCTCCAAAAA CACGCCACA GCGCG TGAGGCGTG TTTTTGAAGCGAAGA 84 99 LT478_RS14165 NONE LT478_RS14160 3301754 .. 3301796 - -19.3 -3.7941 GACGTTCGATAACAA GAAGGCCCGAAAGC-GCGCC CAAG GGTGCAGCTTTCAGGCCTTC GATTATGCACGATGC 100 146 LT478_RS14155 3300853 .. 3300890 - -19.9 -4.39166 GGTCATATATTAAAA GAAAGCAGGCGCGGCTC ACGC GTTCCGCGCCTGCTTTC CCGCTAGCGGGCTAC 100 29 LT478_RS14150 3299333 .. 3299343 - -2.4 -3.03124 CCCGATCTCTCAACA CGCG AGC CGCT CAACTGCACGCCATC 41 102 LT478_RS14145 NONE LT478_RS14140 3296944 .. 3296960 - -2.9 -4.08939 GAACAGTGAGAGAAA CACAACG GAA CGGTGTA ACCTGACAACGCCAC 57 72 LT478_RS14135 NONE LT478_RS14130 3294666 .. 3294676 - -8.2 -3.53224 CACCGCTCTCCTAAA GCGG GTG CCGC GCGTTCGAATCGCGC 62 192 LT478_RS14085 NONE LT478_RS14080 3281642 .. 3281672 - -22.6 -3.37537 GAGTCTAAAACGGAA CCCGGGCCCGCAGA CGA TCTGCGGGCCCGGC GGGGGGGGGAGGCAA 100 64 LT478_RS14075 3280351 .. 3280390 - -19.2 -2.71364 GCACGGGCTGAACTA GCCGCCAACGCGCCGCCGC CCA GCGGCGGCGCGA-AGCTGC CTTCGTACCGGCGCT 88 71 LT478_RS14060 NONE LT478_RS14055 NONE nrfD 3271939 .. 3271993 - -12.9 -2.85351 GGGTGCCACAGCAGA CCGCAGCGTCGGCCCTTTCGTCGTTC GACA GAACGACGAAA-GGCAGATGACGGGG CTTCCCTGCCTTGCG 70 180 LT478_RS14045 NONE LT478_RS14040 NONE LT478_RS14035 3268850 .. 3268888 - -18.9 -3.54146 CTCCGCAACGAAACA GCCCCGCCAACCGGA GGAGGGGGT TCCGGTAGGCGGGGC TTGGGCACAGCGCTC 100 66 LT478_RS14015 3261775 .. 3261795 - -12.5 -3.55548 GAAGACGGGCGGAAA CGCACGCCG CCC CGGCCTGCG CAGACCGGGGCGGTT 79 157 LT478_RS14010 3259837 .. 3259851 - -4.2 -4.40561 GTCGCGCAAAAAGAA GGACGT AAA ACGTAC TATCGGATGGACTTG 69 94 LT478_RS13945 3246825 .. 3246864 - -9.3 -4.82901 TTGGCTCCAGAAAAA GAATGCAGGTCAGGCGA TGAGAG TTGCCTGACCTGCTTTT GTTTCCGGAGTTTTT 100 91 LT478_RS13925 3241177 .. 3241187 - -8.2 -4.30576 GGTTTACTAGGAAAA GCCC ACA GGGC AGCGCAGCGGAAGCG 77 91 LT478_RS13920 3239174 .. 3239204 - -4.6 -3.70417 ACGACACTATGGAAA GCCGCGGCGG ATTCTGGCTTG CTGCCGCAGC GCTGGTGACGGCCAG 58 449 LT478_RS13910 3237860 .. 3237876 - -2.2 -4.30719 CGCCCGCACAACAAA GGCTTC TTATC GAAGCG ATTGAACATGATACC 63 69 LT478_RS13905 NONE LT478_RS13900 3237118 .. 3237131 - -9.5 -4.7373 TCAGGGCAGCAAAAA CCCGC CGAA GCGGG TTTCTCAATTCAGAT 100 152 LT478_RS13895 3235497 .. 3235522 - -4 -4.07568 GGCGTTTTGCGAAAA TCACCCGTTT GTGATG AGACGGATGA GGACGAGAGGATCGG 59 52 LT478_RS13890 NONE LT478_RS13885 3233095 .. 3233132 - -5.5 -2.92389 CAACCTAGCGACAGA GGAGCCCGGGCAG GAGGGAGGAAGG ATGCCCGGGCTCG TGGAACGGTACTTTG 48 108 LT478_RS13880 3232383 .. 3232419 - -7.2 -3.36785 TCATAGCGCAAGCAA CTGCGCCTCGC-TCCGC CCCA GCGACCGCGAAGCTCAG AACGCAGCCTCGAGA 56 22 LT478_RS13875 3230043 .. 3230059 - -2.2 -3.41961 ACGACGAGCAATCAA GCGG GGGGGGGGA CCGC TTTCGCGAGTTTACG 47 36 LT478_RS13870 3228585 .. 3228595 - -6.8 -3.09933 GGCGAAGGGAGCGAA GCAC GTG GTGC TCAAGGGCATCCAGC 51 464 LT478_RS13855 NONE serS NONE LT478_RS13845 NONE LT478_RS13840 3221739 .. 3221763 - -3.5 -2.58822 CCGTCCACACAAGAG CGGCTA-GCG TACCAT CGCATCGCCG AGGAAGGCAATCGCA 40 4 LT478_RS13835 3220667 .. 3220688 - -7.2 -3.09648 GAACAGACGCGAAGA CGGGCCGC CGGCCT ACGACCCG TGAATCGCATACTGC 52 58 LT478_RS13830 3219939 .. 3219984 - -4.7 -3.20382 TCGGACAGTCAGGAA GCGGCGAG-AGG--GGCG-GGGC TTGC GCCCACGTCGACCAACTCGCCGC TTCATGATAGATGCG 48 45 LT478_RS13825 NONE LT478_RS13820 3218049 .. 3218059 - -6.8 -2.52623 GTTTCGTCACAATAC CGTC AAC GACG TTCAGTATTTCTTAA 48 76 LT478_RS13815 3216824 .. 3216864 - -16.1 -3.05596 CAGGGCGGGAGCGAA GCGACCCGCCCATGCGCCC GAA GGGCGCATAAGAAGCTCGC AGGTGGCCGCGCAGG 83 198 LT478_RS13810 3215549 .. 3215576 - -22 -3.64703 GCGCCTTCATGCAAA GCGGGGCCGCCC TTTC GGACGGCCCCGC CGAGGTGCGCGATTG 100 66 LT478_RS13805 3213707 .. 3213734 - -8.4 -3.54741 CATTATCGGCCCAAA GACACGGTTTTC GCGG GAATTCCGTGTC TTTGGGCCGATAATG 62 85 LT478_RS13800 3213091 .. 3213118 - -14.8 -3.88062 ATACAGTATACGAAA CGGGCTGCGGCC TCGC GGTCACAGCCCG GTAACGCGCGGAAGA 93 56 nhaA 3211373 .. 3211385 - -5.5 -3.16267 GGCAAGCATATCGAA GAGCA GGA TGCCC CGAAATGCCCCTTCT 49 148 LT478_RS13785 3209386 .. 3209422 - -2 -3.13522 ACGCGCCCAGGAACA GGGCGCTGGCTGTAGG ATCGG CCCTCATCGCGCACCC CCATCACTCGTATGT 43 13 menD 3207493 .. 3207524 - -5.8 -3.61536 AACCGAACCGCGAAA CCCCCGCTCGAACCA CCG TCGT-CGAACGGGCG CTTACCGCATTCGCC 57 88 LT478_RS13775 3205831 .. 3205870 - -8.4 -3.78934 CGTTTTGTATAATAA GGGCGAGCCGCAGGGAGC GTGT ACTCCCCACGGCTCTCGG ATCGCTTCGGCGGTT 67 475 LT478_RS13770 3202778 .. 3202789 - -3 -4.55798 CACCTCAAAGCAAAA TTTC TCCG GAAA GATCAGGTACACTTC 66 61 menB NONE menC 3198917 .. 3198930 - -3.7 -2.75382 GACGTCACGCAATGA CGAGG CGCT CCACG AGGACGTTTTCCAAC 41 1 LT478_RS13755 3197115 .. 3197150 - -11 -4.36914 GCCCTGGTGATAAAA GACGCGCTCCAGTCCC ACAA GGGAAAGGAGCGCTCC AAGTAAACCCAAACC 93 151 LT478_RS13750 NONE LT478_RS13745 3194621 .. 3194679 - -38.6 -2.60992 AAGCCTCGCAAAGAC GCATCATCGCCCCAAAAACACGCTCCAG CGA CTGAGGCGTGTTTTTGGGGCGATGATGC GATCGGAAACTCAGG 100 80 LT478_RS13740 3193104 .. 3193125 - -13.7 -3.97307 CGCACGCAACAAGAA GCCCCGCCA TTGC TGACGGGGC CTGAAGTCGTTTAGC 91 36 groL 3190249 .. 3190276 - -25.6 -2.90723 CCATGTCGAACGACA GCGGGCCCGCGC GATG GCGCGGGCCCGC ATGGCAGAACCGGGT 100 54 LT478_RS13720 NONE LT478_RS13715 NONE LT478_RS13710 3187639 .. 3187658 - -12.2 -5.31456 CGAACCGACAAAAAA GATCAGGC CTAA GCCTGATC TGAGATTACTGGTCG 100 35 LT478_RS13695 NONE LT478_RS13690 NONE LT478_RS13685 NONE LT478_RS13680 3181382 .. 3181433 - -14.5 -2.72263 ATACGGCGGGGAAAT GCGAAGGGCTGAGCCGACAGAGAA AACCG CTCGCT-TCGACCCCGCCCTTCGC CAAGAACGCTTTCAC 77 98 LT478_RS13665 NONE LT478_RS13660 3178717 .. 3178744 - -8.5 -3.35073 ACCACTTTCAACGAA CGAACGACCAA GGACGG TTGCTCGTTCG AGAGGAGCGCTTAAA 59 199 LT478_RS13655 NONE LT478_RS13650 NONE LT478_RS13645 NONE LT478_RS13640 NONE LT478_RS13635 3172933 .. 3172947 - -7 -2.70932 CCCCGCTCGCAAGCA CTGGCG ACC CGCCGG GAACCGTCGCAGCAG 50 141 LT478_RS13630 3171742 .. 3171777 - -16.2 -2.8806 AAATCTGGTGAGATA TGGTGAAGGCCGTCGA GGGA TCGACGGCCTTCACGG AAGAATGGAAGCTCG 81 44 LT478_RS13605 NONE LT478_RS13600 NONE LT478_RS13595 NONE LT478_RS13590 NONE LT478_RS13585 3163440 .. 3163452 - -9.1 -4.55287 CGCACTGACAGAAAA GACCC CCG GGGTC TTTTACCAAGCGAAC 84 94 LT478_RS13580 3162793 .. 3162805 - -6.2 -4.38092 GAAGAACGAAAACAA GCGG AACCG CCGC AACCCTTGCTACTCC 71 34 LT478_RS13565 3158315 .. 3158332 - -4.1 -3.35996 GACCCTCACTTATAA CCATTGC CTAT GTAATGG TTATAAGTATACCTT 47 48 dcm 3156995 .. 3157010 - -3.2 -3.3761 TGCCCGTAAGAAAAG CGTTAC GATT GTAGCG TAAGAATTGTATGGT 47 60 LT478_RS13555 NONE LT478_RS13550 3154508 .. 3154537 - -25.1 -4.55023 TGTAACACGATAAAA GCCCCGGCTCGCT TTAC AGCGAGCCGGGGC TTCGTTGCGTTCTTA 100 56 LT478_RS13530 3149311 .. 3149324 - -2.3 -3.61232 GCGTTTACAGAAACA TGTCG CGCT CGACG GAGTTCCACTCTGCG 49 1 LT478_RS13525 3148537 .. 3148563 - -23.8 -3.40403 GCCCCCCTACCAGAA CGCCCCCGGATG CAG CATCCGGGGGCG TTCTCGATTGAGCGG 100 71 LT478_RS13515 3145186 .. 3145199 - -4.5 -3.53811 TTCAGCGGGCCGAAA CCGGA CATG TCCAG CGATCACGCCTACGC 52 35 LT478_RS13510 NONE LT478_RS13505 NONE LT478_RS13500 NONE nrfD 3140679 .. 3140714 - -16.8 -3.55444 TCGGCAGCCCGCAAA CGCACGCGCGCCGCCCC GGA GGAGCGGCGCGCG-GAA CATCAGGCTGGGCGA 100 47 LT478_RS13490 NONE LT478_RS13485 3138596 .. 3138617 - -18.7 -5.37593 CTGTAAACGAAAAAA CGCCCCCGC ATGG GCGGGGGCG CGATAGCTCGGAGAT 100 50 LT478_RS13475 3136693 .. 3136708 - -6.1 -4.57569 TCATCGCCCGAAAAA CACGC CTCAGC GCGTG GAGCGTGTTTTTCGG 74 105 LT478_RS13470 3135683 .. 3135695 - -3.3 -4.15222 AGCGTCTCCAAGAAA GAGCA TCC TGCAC CGCGCCTCTAGCCCA 62 33 LT478_RS13465 3134280 .. 3134300 - -12.5 -3.19602 TTCTTGACAGCAATA GCGGAACGG CTC CCGATCCGC AAGGACAAGGAGCCG 74 146 LT478_RS13435 NONE rlmD NONE LT478_RS13425 NONE tilS 3122858 .. 3122873 - -4.6 -4.04927 TCAATCAGGAAACAA CGCTGG CCGG CCATCG AGCCCTGCGCACCAT 62 381 LT478_RS13405 3121192 .. 3121212 - -10.3 -2.91582 GACTCGACTGAGAGA TCGGGCGGC GCA GCCGCCCAG CGTCGAGTCGTTCGC 62 47 hpt 3120328 .. 3120338 - -5.4 -3.04144 GGTCGACCGCCAAGA TAGC TTC GCTA GTAAATCTCCGGCTT 49 23 ftsH NONE folP 3116607 .. 3116628 - -2.9 -4.18018 GCCGTCGACGCAAAA CGAG-GGCAC AGA GCGCCCCTTG CTCACAGCCGCACGC 60 27 LT478_RS13385 3115525 .. 3115557 - -3.3 -3.35798 AGGGCGCAGGGACAA CGGTAGACCCTGAAC CAT GTCGAGGGTCAAGCA GGAGATTCAAAGAGA 47 70 LT478_RS13380 NONE LT478_RS13375 3113319 .. 3113349 - -14.7 -4.00526 AAGTGCATAAGGAAA GGGCTTCGGCGCA GCGAA CGCGACGAAGCCC TTCAAGGGAGGGAAA 95 52 LT478_RS13365 3110770 .. 3110794 - -13.6 -4.02108 CGCACTATAAGCAAA CCCCGCAGTT TTGTG AACCGCGGGG TTTAAGCAAGGGTGA 95 67 LT478_RS13360 3110070 .. 3110099 - -23.7 -3.79747 CCATCGATCACCAAA CGAAACGGGCGCC CGAA GGCGCCCGTTTCG TTTGGTGATCGATGT 100 44 LT478_RS13345 3106094 .. 3106145 - -3 -2.59564 GTTTTACCTGAGAAT CCCCAACGCCATAGCGATATGCA AAATCCG TGC-CATCGTTAGGGCGCCAGAG GGTTCCCCTCTCTTT 38 99 LT478_RS13340 3104742 .. 3104765 - -21 -3.17075 GCCCCCGCAACGCAA GCGGGCCGCC CTCG GGCGGCCCGC TGTACGATTCGCGTT 100 52 LT478_RS13330 3102285 .. 3102316 - -16.6 -3.1855 GCTCGGAACAGCGAA GGGACGGAGGATGA GACA TCGTCCCCCGTCCC TTTATCCCGTTCCTC 89 43 LT478_RS13325 NONE LT478_RS13320 NONE LT478_RS13315 NONE LT478_RS13310 NONE LT478_RS13305 NONE LT478_RS13300 3092666 .. 3092689 - -4.6 -3.93583 TAATCTATGGAGAAA GCTCAGGAAGG ACC CCTTCATGA-C GTGCGATCCATCAAC 60 498 rpoN NONE LT478_RS13285 3088916 .. 3088973 - -15.7 -3.16039 AACGATGTTCATGAA TCACTCCTTTTGCTTCTCGGGAATGCG GTTC CGCACCTCCGAAAAGCAAAAAGCGTGC CAGCCTGCCCAAGCG 85 43 fixA NONE LT478_RS13275 3086871 .. 3086881 - -6.8 -3.35798 ATCGCTCATGCAGAA CGAG GAT CTCG CTTCATTCCTCGAAG 55 361 LT478_RS13255 3085154 .. 3085181 - -17.1 -3.81137 CCTCAAACACGCAAA TCCGGGATCGC CCGATC GCGATCCCGGA TTTGATAGCGAGCGC 100 72 LT478_RS13240 3082342 .. 3082365 - -9.5 -3.37761 GCGCAAGAAAGCCAA CGTTGCGGC AAATAG GCCGCGACG CATGAAGCTCCGTCG 63 165 LT478_RS13235 3080508 .. 3080545 - -30.1 -2.87468 GCGTAGTATACGACA GGAGCGCCCCCGATTTC AACC GAAATCGGGGGCGCTCC AAGCTTAGAACAGGC 100 30 LT478_RS13230 3079567 .. 3079616 - -22.3 -3.484 TGCATGATACGACAA GCCGACCGAAACGCGCGGAAT-CC TGA GATAATCCGCACGCTTCGGTCGGC AACCACCGCTTGGAC 100 55 LT478_RS13225 NONE LT478_RS13220 3077910 .. 3077925 - -3.2 -4.25104 TCGTGGCGATGAAAA CACGCA GCCA TGCACG TCTTACAGCCGATGC 62 99 LT478_RS13215 NONE fdhF NONE LT478_RS13205 NONE LT478_RS13200 3073731 .. 3073742 - -3.6 -3.3782 GATGCAGGGAATGAA GGCG CCCA CACC GCGTCAGAGGCTGGG 47 62 tsaE NONE tsaD 3068584 .. 3068600 - -7.9 -3.16683 ACGCTACGCGATCAA GGCGCTC AGT GAGCCCC CCCCCCCCCGTCTCC 57 392 LT478_RS13175 NONE LT478_RS13165 3064155 .. 3064168 - -9.5 -2.65815 GCGAGAGCGACAGCA GCGGC GCGC GCCGC GGAGGCCTCGTCACC 56 36 LT478_RS13160 3062300 .. 3062315 - -11.8 -3.23216 CCTCAGGAGGAGGAA CGCCGC AGCG GCGGCG AGGACGAGCGCGAGG 69 334 LT478_RS13155 3061719 .. 3061738 - -13.6 -3.60098 ATGTTTCACGTGAAA CATCCCGG CTGA CCGGGATG CGCGCCGCCCCACGA 88 301 kdpA NONE kdpB NONE kdpC 3056577 .. 3056590 - -3.7 -2.78384 GGTGCCGCCATCATA GCACG CCGT CGAGC ATCAGGTTCACTTTC 41 7 LT478_RS13135 NONE LT478_RS13130 3052695 .. 3052714 - -4.2 -3.5362 GAACCTGTACAAATA CACCAAAG TCTA CTCTGGGG CGGAACCGGTTCTCA 51 371 LT478_RS13120 NONE LT478_RS13115 3049843 .. 3049858 - -9 -3.16668 GAAGATCCTGACCAA GGCTTG AAAG CAAGCC TTGTTGTCGCGCTCG 57 245 LT478_RS13095 3046076 .. 3046088 - -3.3 -3.79678 AATCTCTTAGAATAA TCGCA TGA TGCGT ATGATAGCATTCCCG 54 123 LT478_RS13090 NONE LT478_RS13085 3044431 .. 3044477 - -18.2 -3.63627 TTCTCACACGGGAAA CG-CGAAGGGCGTCCGCAAGCG GGAGA CGCT-GCGAACGCCCTTCGTCA TCGGGCGGAAGCTAG 100 37 LT478_RS13080 NONE tatC 3042679 .. 3042700 - -17.3 -5.2197 TAGAAAAAGCAAAAA GGCCCGTCG ATCT CGACGGGCC TTCACCATCAGAATA 100 44 hypA NONE hypB 3041528 .. 3041546 - -3.8 -3.30124 TCCGACGGCTGACAA GCCGTC GGAACTA AACGGC GCGAATGCGGTTCGC 47 17 nadE 3040327 .. 3040341 - -3.4 -3.53712 AGTTTGAAGAACGAA CGACGC TCC ACGACG GACGACCTCCTTTGC 49 181 LT478_RS13055 3038635 .. 3038658 - -7.4 -2.71011 ACGGCCTCTCAAGCA GCACGGATGCG CGC CGCATGCG-GC TTTAGTAGGTATGGG 50 169 LT478_RS13050 3036773 .. 3036789 - -5.8 -3.36327 CCAGTTGACGGACAA GGACGG CAATC CCATCC CCAACGTCTACTGCG 53 202 LT478_RS13040 3033584 .. 3033594 - -2.4 -2.63913 CATGACCCCATACTA CGCG ACC CGCC CGAGGTGCGCCATAC 38 75 LT478_RS13035 NONE LT478_RS13030 3031499 .. 3031518 - -7.2 -3.1829 ATAGCATCATCAACA CTGAATGC AAGG GCATTCAA AGAAATCTGAGCGCT 54 135 LT478_RS13025 3030955 .. 3031006 - -9.3 -3.29511 CCTAGCCGCTCAGAA CCCGGGAGCTTTCGC-ACACGGCC AATAA GGCCGCTTAGCTCAAGCACCCGGA ACCTTCGTGGCTATG 63 93 groL 3029190 .. 3029214 - -19.3 -3.91196 CTCATATACAGCAAA GCGGGACGACC GAT GGTCGCCCCGC CTTCCGAATTATGGT 100 70 LT478_RS13015 3027002 .. 3027014 - -2.6 -3.02829 GACAGCGGGCGAAGA GGCC AGGCG GACC CTCGCGACGGGACCC 41 117 LT478_RS13010 NONE rrf 3023532 .. 3023575 - -24.6 -3.29511 CCCACGCCCCCAGAA CGCGCGAAGGCCCCGCCTCCC GAG GGG-GGCGGGGCCTCCGCATG CCGAAACGCCCTCCG 100 41 LT478_RS13000 NONE LT478_RS12995 3021813 .. 3021850 - -19.9 -3.53811 CCGAGCCCCTTCAAA CCACGGAGGCTCCGTCG CACA CGACGGAGCCTCCGTTT GCATTTGGAATCTGG 100 47 LT478_RS12980 3019684 .. 3019703 - -11.4 -3.82202 CAGTCTGAAACAGAA GCGC-CCGC GAT GCGGCGCGC TAAGAACAATCGCAT 80 57 LT478_RS12975 3019596 .. 3019608 - -9.1 -3.60818 CGAAAAGCGCGCAAA GTGGC TGG GCCAC CAGGATTCGAACCTG 68 13 LT478_RS12965 3016987 .. 3017001 - -2.7 -3.62591 GGGAGAAGCCCTAAA CGCCC TTGTC GGGCC CGTCGCCTTCATCAT 49 6 LT478_RS12960 3015748 .. 3015774 - -15.9 -4.4715 GGTCAAGCGACAAAA CGAGCCGGCTG GAAAA CAACCGGCTCG CTTGGGGACAAATAC 100 59 LT478_RS12955 3014808 .. 3014821 - -3.1 -3.04398 TTCTTTGGTCAAAAG TGCTC CTTC AAGCA TATCGTCGTTAAGCA 43 296 infA NONE rpmJ NONE rpsM NONE rpsK NONE rpsD NONE LT478_RS12925 NONE rplQ 3011235 .. 3011266 - -14.4 -4.08767 TTCATCCTCTGAAAA GCAGAACGGGGACC CGCA GGTCCCCGTTCGGA AAAGCAATCTGAAAA 95 48 LT478_RS12915 3010753 .. 3010767 - -2.8 -2.78395 AAGCCCGATCAACCA TGATAG TTC CTTTCA GATAGAGGTATCGTT 39 47 LT478_RS12910 3010260 .. 3010281 - -15.1 -5.08088 AACCGGCAAGAAAAA GCCCGCGGC GCTG GCCACGGGC TTCGGAGGATGCCGG 100 132 LT478_RS12905 3008433 .. 3008455 - -12.6 -3.34043 GGCAGTATGCCACAA CGGACGGCGC CGC GCACCGGCCG GGGTGACAATCGCGC 76 45 LT478_RS12900 3007537 .. 3007548 - -4.4 -2.72839 AAGCATGCCGAATGA CATC AAAT GATG TGATAGCACTACTAC 43 37 LT478_RS12895 NONE LT478_RS12890 NONE eno 3004550 .. 3004569 - -15 -3.71848 CCCGCTCATGAAGAA GGGCTGCC CAAA GGCAGCCC TTCTCGTTTCGCGAA 93 70 LT478_RS12875 3002321 .. 3002359 - -8 -3.61178 CCGATCCATGTCAAA CCTCTCTCACTGGTTGGC GTA GTCAGTCAGCGAGAGGGG CCGGGGTGCGCCGAA 64 164 LT478_RS12870 3001817 .. 3001831 - -4.2 -3.39844 CGCATACGTCAAACA CCGC GGGGGAA GCGG TTCCTAATGCCCGCC 49 29 LT478_RS12845 NONE alr NONE LT478_RS12835 2992816 .. 2992853 - -14.9 -4.08767 GTTACGCTGCGAAAA GGCCCCGCTATCGAAAG AAAC CTTTCGTTAACGGGGCT GTATGAGGCAAGGGG 95 65 LT478_RS12825 NONE gltA 2988786 .. 2988803 - -6.2 -3.79906 GCAGCGCGAGAACAA CCGCGC GGGTTG GCGCAG TAAGTCAGCGAGGGG 60 164 LT478_RS12815 2987131 .. 2987143 - -4.7 -3.65046 GCTGGACGCCAAGAA GGCGC CGA GCGCT CAGGACTGGTTCCGC 55 236 LT478_RS12805 2984004 .. 2984044 - -17.6 -2.7185 ACGACCCTGCAAGCA GCAC-CGCGAAGGCCCGCC GATC GGCGGGCCTTCGCTTGTTC AGGGAGGGTACGCTC 84 52 nhaA 2981081 .. 2981092 - -3.6 -3.18433 AGGTTAAAAAGTATA GCGC AACG GCAC GATCACCGTTCGTTT 45 28 glmU 2979308 .. 2979338 - -11 -2.78798 ATCGCTCACCCAAAG CGACGCGGTAACGG CAA CCGAAACCGCGTGG GGATGCGTGAACAGC 64 355 LT478_RS12770 NONE LT478_RS12765 NONE LT478_RS12760 NONE LT478_RS12755 NONE LT478_RS12750 NONE LT478_RS12745 NONE LT478_RS12740 NONE LT478_RS12735 NONE LT478_RS12730 NONE pth 2967851 .. 2967876 - -14.7 -4.55128 ACGGTGAAATGAAAA CGCACCCGCCA CTTT CGACGGGTGCG CGCTAGTTGAACGCT 100 28 LT478_RS12710 2963098 .. 2963153 - -25.7 -2.53015 ATATGCGCGAACGCA GGAGGAGCCTCTCGCGCTTC-GCGAT GCAAA ATCGCTAAAGCGCACGAGGCTCCTCC TTGGACGGGTCGCTT 100 115 LT478_RS12705 2961552 .. 2961605 - -13.3 -2.63823 AAGCGAGACAACGCA TCATCGCCCGTAAAACACGGTTTTCG CAC CTGAGAC-GTGTTTTTCGGGCGATGA TGGGCCGCGCACGGC 72 72 LT478_RS12695 NONE LT478_RS12690 2957149 .. 2957166 - -4.1 -4.09685 CTTCAGGGTCGAAAA CGATCTT CCGG ATGATCG ATCGACTGCAACCAA 59 281 LT478_RS12685 2956652 .. 2956666 - -3.4 -3.82665 GACGACATGACGAAA GCCGAC CTC GCCCGC ACGGCAAGCTAGCAT 54 47 LT478_RS12675 2954800 .. 2954815 - -3.3 -2.6834 AGCAGCAGAATGAAC GGTTT CATGGC AAACC CCCTACGCGTTCCGG 40 28 LT478_RS12670 2953155 .. 2953186 - -5 -2.52543 AGCGCGCGCAACCGA GAGGCGGCGATCGC GCAG GCGATTATCGTCTC GCACATTCGTCCTCC 42 57 LT478_RS12665 NONE LT478_RS12660 2950959 .. 2951000 - -11.4 -2.71712 CGTGTCGCTGCAAAT CGCCTACCTGCGCGTGCG CACGCT CGCTCACGCAGGATGGCA TCGTATCGTGGAGGC 62 514 LT478_RS12650 2946937 .. 2946947 - -3.2 -3.91897 CTTCCCACCCATAAA CGAG GCG CTCA CGCAAGCAGCGCAGG 56 405 LT478_RS12640 2944956 .. 2944970 - -3.5 -4.15396 CTTCAAAGCAAACAA TACCG CCGAC CGGCA GTTGACCGAGGGACC 60 354 LT478_RS12625 2940884 .. 2940908 - -15.9 -2.56095 TGCAGAGCGAACCCA TTTGTGCAGAC ACC GTCTGCACAAA TTCAAAACCGTCCTA 78 38 LT478_RS12615 2939552 .. 2939579 - -17.8 -5.41143 GAGGGCGCAAAAAAA CGCCGCAGATGA ATCA TCACCTGCGGCG CTGAACGAGTCCGTC 100 235 LT478_RS12610 2938066 .. 2938093 - -8.5 -3.53012 CGTTGTCGCCCGAAA CGTGCGTTTTT TCGCTC AAAAGCGCACG TTTCGGGCGACAACG 62 60 LT478_RS12600 2935743 .. 2935757 - -10 -4.61482 TTGGGTAAAAAAGAA GGTTGC CAG GCAACC AGGGTTCGCTAAGAC 89 200 LT478_RS12595 2934371 .. 2934387 - -6.5 -3.54 ACGAGTTCAGAAAGA GACGGCA GAA TCCCGTC GAAAACTGCCAAAAA 58 50 LT478_RS12580 2929831 .. 2929854 - -18.2 -4.18018 TCCCCGCATGCAAAA GGGCCGGATC CTTC GATCCGGCCC GGAAGTTGCTGGGCG 100 121 LT478_RS12550 2923110 .. 2923136 - -8.6 -4.08216 GCATTCTCGGGAAAA GGCCTGGCCACG TTT CGCGACGAAGCC GAAATAGCACGCTAA 71 92 recJ NONE LT478_RS12535 NONE LT478_RS12530 2915255 .. 2915280 - -3.9 -3.40371 TACTTCACGAAGCAA GCCGGGATTGCC AAC GGCA-TCGTGGC CATGATGGGCGGCCT 49 232 LT478_RS12520 NONE LT478_RS12515 2912269 .. 2912299 - -4.8 -4.7416 GCAAAACGGGAAAAA GCGTGTCAAA CCCCCCGTCCC TTCGACACGC TTTCCTTCGGTTACA 78 36 LT478_RS12500 2908334 .. 2908362 - -8.2 -2.63252 ATCTTCCAAGAAGAT GCAATACGGTAC GCATG ATACCGCATCGC GAGGAGCGCGTTCGG 52 517 LT478_RS12495 2906771 .. 2906781 - -5.4 -3.35813 GCGCACCTCAAGGAA GTGA CCA TCAC GCGTCTGTTCGCCCT 51 373 argF 2904368 .. 2904394 - -7.9 -2.57211 AGGGTGCCGCAGAAG CGGCATCCTCG CAGAC CGAGCCTGCCG TGCGACCCTGCGCAG 52 68 LT478_RS12480 2902751 .. 2902773 - -17.7 -3.88559 AAGCAGTTTGAGAAA CCGGGGCGC GCGGG GCGCCCCGG GGGCAGCGCGGAGAG 100 41 LT478_RS12475 NONE LT478_RS12470 2900608 .. 2900627 - -7.8 -4.83615 GACTCGCGAGAAAAA TGGACGCG AAAG CGCACCCA TGACAATTCCCGAGG 91 223 LT478_RS12465 2899208 .. 2899221 - -5.3 -4.08945 ATTACGCGTCGAAAA CTACT GAAA AGTAG TGCTTTTTGTCCATG 65 120 LT478_RS12460 2898634 .. 2898691 - -27.1 -3.83375 GGAAAACGAAGAGAA CGAGCAGTCGCCCGCATGATGCGCTCG AAAC CGAGCAGATCATGCGGGCGACGTCCCG AACCGAAGACAGCTT 100 61 LT478_RS12455 2897120 .. 2897154 - -6.5 -3.1211 CACGATAGCATCCAA GCGAGTCACCTCCTTCC TCA AGAAGTAGGTG-C-CGC CTGACGCTCAGGACT 52 108 LT478_RS12450 2895731 .. 2895756 - -23.3 -2.52543 ACGTTTCCCAACGCA CGGCGGCCGCC CGAA GGCGGCCGCCG GAACAAGCACGATGC 100 51 LT478_RS12445 2893303 .. 2893320 - -3.3 -3.72576 GCTTGGCGCAGGAAA GGATCGC GAGC GCTACCC CACGATCTCGTAGAG 54 20 LT478_RS12440 NONE LT478_RS12435 2891895 .. 2891908 - -5.2 -3.36569 CGAATCGTCGAAACA GCCG GGCTAA CGGC ACGCGAACGCGAGAT 51 212 LT478_RS12420 NONE LT478_RS12415 2887590 .. 2887600 - -2.4 -3.14344 CATCTCCTTTACCAA GCGC TTG GTGC TTGGCACCAGTGTAT 43 54 LT478_RS12410 NONE LT478_RS12405 2886872 .. 2886889 - -14.1 -3.53091 AGCGCGTTTCCGAAA GCGGCCC TACG GGGCCGC TTTTGCTATCGCTCC 86 31 LT478_RS12390 NONE LT478_RS12385 NONE LT478_RS12380 2880683 .. 2880716 - -16.7 -2.87132 CCGCTTCGCGAGAGA GCTTGGGGCCGCAGC AAAC GCCGCAGCCCCAATC ATCACCCAACCGGCT 85 44 LT478_RS12370 NONE LT478_RS12365 2873727 .. 2873761 - -17 -3.53343 AACCTCCTTCCGAAA GCAACGGGGCGAGCCG CTC CGGCCCGCCCCGCGTC AACTCGCTCGTCGTT 100 43 LT478_RS12360 2873066 .. 2873093 - -4.8 -3.50393 TGCTATCCCAGAGAA GAGTGTACCCCTC CTC GAGGCG-ACACGC TGCCGCGATTTGCAG 52 144 LT478_RS12355 NONE LT478_RS12350 2871719 .. 2871742 - -13.9 -5.64274 GGACGCACAAAAAAA CGCCGCATC ACGATG GATGCGGCG GCCAGGTTCGCGGGT 100 85 LT478_RS12345 2870438 .. 2870459 - -4.3 -3.64822 ACGTCGTGATGGAAA CGCCGCTCG CCCT CGACCAACG CCTCGATGGCCGAAA 54 60 rsmI 2861036 .. 2861085 - -12.7 -2.52676 TACCGCGCGAACGGA CGCGCCATCG-ACGACGAGCCGGC CAT GCCGGCACCGCGTGCCATCGCGCG CCGCCTCACGCCTCG 68 31 LT478_RS12300 NONE LT478_RS12295 2858936 .. 2858953 - -8.4 -3.14211 ACGCGCTCGGACGAA CGCAGG GCACGA CCTGCG GCTTTCATACGGTGC 57 188 LT478_RS12290 2856978 .. 2857023 - -10.3 -3.6215 CCAAGGGAGCCGAAA CCGTGGAGATCGAAGGCGGCA ACCA TGCCGGCTTCGGCGCCTACGG CCCGCAAAGCGGCGA 71 177 LT478_RS12280 NONE LT478_RS12275 2854978 .. 2854989 - -3.6 -3.53722 GCGAGACGCATACAA GAGC CGCC GCCC CGACATGGGGCGTGG 49 362 metG NONE LT478_RS12255 NONE LT478_RS12250 NONE LT478_RS12245 NONE LT478_RS12240 2848518 .. 2848537 - -5.6 -2.95448 ACCAATATTGACATA GCCGGGCCG GGC CGTCCCG-C GAGGACTCGCCGGCG 48 407 LT478_RS12230 2847608 .. 2847631 - -16 -4.35524 GCCGGAAACGCAAAA CGGGTGCCGC GCTT GCGACACCCG TCGGTTTGCCGGAAC 100 54 LT478_RS12225 2845908 .. 2845919 - -7.2 -3.05844 TCCTCGACCCGAAGA CGGG CTTC CCCG TCGAGACGGATGCCG 51 201 LT478_RS12215 2842920 .. 2842947 - -10.5 -3.36492 CGCCGAACGGGAGAA GGCCGACGCCC TTGCAC GGACGCCGACC TTCTTGACCGCAGAC 68 74 LT478_RS12205 2840875 .. 2840904 - -16.7 -3.63068 CTATAGTATCGCAAA GACCTCTTTCATT ACCT AATGAAAGAGGTC TTTGATAAATACATC 100 148 LT478_RS12200 2840276 .. 2840287 - -4.4 -3.82084 CGTCAAGATGAAGAA CGAT TGGC ATCG AGCCCACCTACAAGG 57 33 LT478_RS12195 2839996 .. 2840026 - -2.7 -3.55761 GAGGCATTTGTCAAA TG-GCAAT-TGCAGA CGA TCTGCAAAATGCACA CGAACGGGATTTACA 47 36 LT478_RS12190 2839820 .. 2839848 - -22.5 -5.00895 CCCATTACAGAAAAA TCGGGGCGAAGCC GTT GGCCTCGCCCCGA TCTAGTTTCCGTGGT 100 37 LT478_RS12185 NONE LT478_RS12180 2837491 .. 2837518 - -9.8 -3.66178 CCCGTGAATGGGAAA CCGCGGAGACAGG CGG CCTGCC-CCGCGC GCGCTTTCGTGACAG 73 243 LT478_RS12175 2836262 .. 2836276 - -5.6 -3.53091 ATGCGGGCGGCGAAA CCGCCG GAA CGGCAA CGTGGAGCCGATCCC 55 125 LT478_RS12170 NONE LT478_RS12165 2833773 .. 2833793 - -4 -3.03487 AATGGTAAAGAAGCA CCTGCGGCCA CAT TGGC-GC-GG CTTGCCAACTTCCCG 43 334 LT478_RS12160 2832213 .. 2832243 - -20.6 -3.02144 CGAGGGGGCCTAAGA CGGGGAAAGGAAGC CAG GCTTCCTTTCCCCA CCCCTCTAAAGACGT 95 62 LT478_RS12155 2831181 .. 2831220 - -15 -4.37886 GGACCTTTGACAAAA GGAGCCCGTCCAAGCG TACGATGG CGCTTCGGCGGGCTCC CTCTTGCTTATTCGG 100 79 LT478_RS12150 NONE ccsA NONE LT478_RS12140 NONE LT478_RS12135 2826485 .. 2826543 - -11.8 -4.07568 TCCTGGTGCTGAAAA TCGCCG-TGTTGCGC--GGCCGCGCGTGC TTTC GCACGCAAGGGCAAGCGCAAAAGCGGCGA GTTTCGGCGCCAGGG 84 89 LT478_RS12130 NONE LT478_RS12125 NONE LT478_RS12120 2824374 .. 2824408 - -10.7 -2.6891 TAGGACATTATACTA TTCGAAGGCCTGCCA GATGA CGGCAGGCTTTCGCA ATCGCTCCGTTACGC 60 60 LT478_RS12115 NONE LT478_RS12110 2819881 .. 2819897 - -5.7 -3.02511 CGTACCTCCTGAACA CTGCGCG CGG CACGCTG GTGGACGAGCAGGCC 48 365 LT478_RS12100 NONE LT478_RS12095 2815581 .. 2815635 - -4.7 -3.28712 GCCTCGCGTGGAGAA GCCTC-GCGTCGGACGGGCGCCCCGGC ACC GCCGACAC-CCTGCCGGTCGCTGCGGC CTCGCCCCACGCGCT 49 39 LT478_RS12090 NONE nrdG 2812354 .. 2812370 - -2.1 -3.90112 CCGTCGCCAAGGAAA GGAGACG GCG CCTCACC ACGATGGGGGCTTTA 54 21 LT478_RS12080 NONE LT478_RS12075 2809883 .. 2809899 - -8 -4.67353 CGACGGAGGGAAAAA CAGCAC TAAAT GTGCTG TTTTACACTGATTCG 81 394 LT478_RS12070 NONE pstC NONE pstA NONE pstB 2805673 .. 2805730 - -10 -3.5556 TAAAGCCGAAAGGAA GCCCCTTTGTCATCCTGAGGGAACGCGGC TTT GCCGCCTCCGCTCAGGATGACA--GGC-C GCGACTTCGGCGCTG 70 65 LT478_RS12050 2804846 .. 2804866 - -4.6 -2.76261 TCTTAACCTTGAAAT GCGTCGGGC TCAT GCGCG-CGC TCACGAGGAGGGTTT 43 26 LT478_RS12045 2803393 .. 2803407 - -3.4 -3.8062 CAAGCTCCAGAAGAA CGGCAG CGC CCTCCG GAGAGGGCGCAAAAA 54 70 LT478_RS12040 2801349 .. 2801394 - -4.5 -5.37345 CGCAACGAGAAAAAA CGTCGGACAGCGCGTCCGGGCG CTT CGCGAGGA-GAGCAATCTGACG CAGGAGCAGCTTGCG 90 151 LT478_RS12030 2800262 .. 2800299 - -6.3 -3.49475 TCCATTCTGATACAA CG-TTTTTCGCATGATGC GAC GCATCATGCGATTCAGCG TAAGAAGGATAGGCG 55 74 LT478_RS12025 2799546 .. 2799566 - -2.5 -4.09685 GGGCACGCGGCAAAA CCGCG TTATCCCTTCG CGCGG ATTCGCGCAAACCCT 57 39 LT478_RS12020 2798047 .. 2798073 - -21 -3.20435 CCAATGACGCACGAA GGGGCTGCAGTT CAA AACTGCAGCCCC TTTCCTTTTAGGAAA 100 84 LT478_RS12015 NONE LT478_RS12010 NONE LT478_RS12005 2794055 .. 2794068 - -8.1 -2.77899 CTGCTCCACTAACGA CGTGC GCCC GCACG CCCCCACGCGCTCAG 53 56 alaS 2791094 .. 2791120 - -12.3 -5.1861 CCCAGGATGAAAAAA GGGCTTCTCCG ATTCA CGGAGAAGCCG CCGAAAAAGACGCCC 100 264 ruvX 2790231 .. 2790251 - -3.2 -3.14132 CTCTTCTTCCATCAA GCCTCACG GCGCG CGTCAAGC CACGCCTGCAAAAAC 45 1 mltG 2789025 .. 2789038 - -2.4 -4.36914 TCGGGTTCGAGAAAA GACA TGGCGT TGTC GCTAACGGCCTAGGA 63 35 LT478_RS11985 2788472 .. 2788486 - -7.1 -2.62184 CGCTCGTTCACATCA GACGC CCTGC GCGTC GGGTTCCTCATCCTC 49 8 LT478_RS11980 2787372 .. 2787418 - -6.5 -2.73364 CGGGGACGCGAAGGA TGCCGTACGGTGCCAACCGAGA CGCT TC-CAGCTGGCGCCTCACGGGA TCCTTCGACTCCGCG 50 101 aroC NONE LT478_RS11970 NONE aroB NONE aroQ NONE LT478_RS11955 2782598 .. 2782651 - -5.9 -4.07687 ATTGGCCCCGCAAAA GCCCAGATGGCGAAAATCGTGAGGC TTTC ACCGCCCGATTTTCGCTCTCTGAAT TGTCATGGGTGCCGT 65 79 efp 2781729 .. 2781753 - -22.9 -4.75472 TGTAGACGAACAAAA CGAGGGCGCCC GTC GGGCGCCCTCG TTTCCATTGAGCCGA 100 59 accB NONE accC NONE LT478_RS11930 NONE nusB NONE LT478_RS11920 2776711 .. 2776737 - -6.5 -3.03243 ATGCATCCTTCAACA GGGGCTACGCCG AAAC CGGCGCA-CCCG TCTCCTGCGCAGACG 52 3 dxs 2774766 .. 2774795 - -25.1 -4.94058 CGAATGTAAAGAAAA GGCGCCGGCTGCA CAAT TGCAGCCGGCGCC TTCATGCCAAGAACG 100 48 LT478_RS11910 2773500 .. 2773522 - -20.6 -3.80114 GACTAACGCATGAAA GCGACCCCCG ATC CGGGGGTCGC AGCATTTCCGAGCGG 100 69 LT478_RS11895 NONE LT478_RS11890 2770447 .. 2770468 - -12.9 -2.59431 GGCGCCGAGAAGCGA CGGGCGGCC AGCA GGCCGCCCC TACGGAGCCGTCACG 68 75 LT478_RS11885 2769701 .. 2769725 - -15 -2.84812 AGCCATAGTAGTATA GCACAGCGGC ACCCG GCCGCTGCGC TCATTTTGACGAACT 79 85 rpsA 2768259 .. 2768284 - -19.1 -4.4261 GCTCCAATAGCAAAA GAAGGCCGGTC TTGC GACCGGCCTTC TCATATACGCGTTAT 100 52 mnmA NONE coaE 2762728 .. 2762754 - -10.8 -4.56133 CCTCAACAACGAAAA CAGGCTCCGGCC AAG AACCGAAGCCCG CAGCTTTACCAGGGA 89 174 LT478_RS11845 2760803 .. 2760830 - -9 -3.38812 TCCTTCCGAACAACA GCGGAGCACCGA CGCG TCGGAGCCGCGC AACGTAAAACTTCGC 63 98 uvrB 2758584 .. 2758610 - -10.8 -2.53876 TTCCACCCGAAGCGA TCGCGTCGAGCG GCG CGCTTCACGCGA CGAGCGGCCTCTCGG 60 47 LT478_RS11835 2757620 .. 2757652 - -21.3 -3.74077 CTCGAGACATCGAAA CGGGGGCTGTCCGAC ACT GTCGAGCAGCCCCCG TTTTCGCCGAGTTAG 100 65 LT478_RS11815 2753220 .. 2753239 - -3.5 -3.72576 GCTTTCGCGAGCAAA CGTAGTG GCGGGA CGCTACG CAAGCATCGCCGTCG 54 477 LT478_RS11790 2750138 .. 2750156 - -5.3 -3.36492 CGCCCAAGGCGAGAA GCGCAAGC GCCT GCTTGC-C GGCGCGGAACTTGCC 51 401 LT478_RS11780 2748844 .. 2748866 - -5.5 -3.11634 CTGCAGACGAGGCAA CCGCCCC TCGTTCACC GAGGCGG GCGCGCCCGACGAGG 49 220 LT478_RS11770 2747702 .. 2747724 - -9.8 -3.09516 TTCTCCATCACGCAA GGGCCGCTCA CGC TGAGCGAGCC GCAGCCGGCCATGAG 60 219 LT478_RS11750 2743318 .. 2743347 - -3.5 -3.53563 ACATGTGTTCTGAAA CACCCGATGCTTC ACGT GAAACATCGCTCG CACAATTTCTCTCCG 49 59 LT478_RS11745 2742247 .. 2742279 - -6.9 -2.70932 TCCTGCGTGCAACCA GCGTACACCCTCACG TTA CGTGAGGGTCAACAG ACGCGTGCAATTTTT 50 165 LT478_RS11740 2741400 .. 2741436 - -23.1 -3.08679 TTTTGCGAGCGAAGA TG-GCGCCCCGCCGCC GCGAAA GGCGGCGGGGCGCACA TTCCTATGCGCAGTA 100 29 LT478_RS11720 2734729 .. 2734748 - -12.8 -2.94199 GAGCCATCAAGTATA GCAGCGCG AGGG CGCGCCGC CGAAGCGGATTCGCC 70 109 recN 2732951 .. 2732961 - -4.6 -5.13741 GGAACGCAAGAAAAA CGAG TCG CCCG CTTGGGCTATCCGGC 83 32 LT478_RS11700 2727229 .. 2727257 - -17.6 -4.8622 CCCCGCAATGAAAAA GACCTGTCCTTC TCATC GAAGGACAGGTC TTGTAAACCTGCGGT 100 440 LT478_RS11695 NONE LT478_RS11690 NONE LT478_RS11685 NONE LT478_RS11680 2723662 .. 2723676 - -4.2 -4.42386 CGTGGACCCAGAAAA GCGATG CGG CATGGC AGAAGGGCCAGCGCT 69 272 LT478_RS11670 2721730 .. 2721744 - -3.4 -4.07885 GACGGCGCGCGAAAA CGGCCG CAC CTACCG TCTATACGCGAACAG 60 206 LT478_RS11660 2719448 .. 2719474 - -10 -2.73483 ATCGCATCCGAAGCA CGCGCCGCTCGC GCT GCGACGGGCGCA AGCGCGAATGCAAAG 61 68 LT478_RS11610 2710223 .. 2710263 - -17.7 -3.05715 AAGTCGCGGATCCAA CGCGCGAAGGGCCGCATC TTGCTC GATGCGGCCCTTCG-GCT AGGAGAGGGGATGGT 89 55 LT478_RS11600 2707819 .. 2707839 - -2.3 -4.67641 ACCCGAAAATGAAAA CGACCGCGC CCT GCTCGCACG CGTTTTCCGGCATTT 68 108 pyrH NONE frr 2706342 .. 2706371 - -21.5 -2.98387 CCTCACAAAAGACGA GAAGCCGACGGCC TCAT GGCCGCCGGCTTC GGAGATTTAATTCGG 100 51 LT478_RS11585 NONE LT478_RS11580 NONE dxr 2703127 .. 2703145 - -3 -4.24948 CGACGACATCGAAAA GTTCGTCG ATC CGACCTAC CTTGCGCAAGCGCGC 64 169 LT478_RS11560 2700821 .. 2700848 - -16.4 -3.09635 ATTTCGATGACGGAA GCGCGCGCAAGTC AAG GACTTGCGCGC-C GACCGCAACGCCGAA 83 82 ispG NONE LT478_RS11550 2697380 .. 2697400 - -5.3 -3.14211 AGGTTGGCGCAGTAA GTCAGCGAG AGG CGCCCTGAC GCCCGAGATCGCGGG 50 159 LT478_RS11545 2696315 .. 2696328 - -3.8 -3.84451 CGTCGGAAATGGAAA CGCT GTTCCG AGCG AACGACGTGGAGCCC 58 355 LT478_RS11535 2694336 .. 2694371 - -16.3 -3.91858 CACAGACGGCAGAAA CGAAGCGGCGAGCGGA GACCG TCCGCTCGCCG-TTCA GGATGCGAACAGGGG 95 63 LT478_RS11530 2693850 .. 2693877 - -4.8 -4.33165 CCAAATCGACGAAAA GGGCAATGCTCGC AAC GCGAGCA-TGAGC GAAGCCGTCAAAGGA 68 119 LT478_RS11525 2693343 .. 2693389 - -4 -4.15748 GGAGCTGAAAAAATA GCGCAGCAGCGTGTTCTCCGGC ATG GACGGGCAGCTCGCAGCCGTGC GCTAGGCGCCCGGCG 62 27 LT478_RS11520 2691695 .. 2691705 - -3.2 -4.14392 TTTGAACTGGGAAAA GAGA AGC TCCC CGGCGCTACAGCTTG 62 31 LT478_RS11515 2690348 .. 2690378 - -19.8 -3.17797 CCTATATATAGGTAA GTGCCGCGCATCGT TTC AAGATGCGCGGCAC TTCTTCGTTCGAGGC 91 69 LT478_RS11505 NONE LT478_RS11500 NONE LT478_RS11495 NONE LT478_RS11490 2684593 .. 2684611 - -3 -4.56883 GCAAGACGAAATAAA GATACGGC TTC GCCCTAGC CATTCAGGCCAAAAC 66 236 loaP 2683868 .. 2683883 - -2.6 -4.47786 AAGCAGGGAAAGAAA TGGGAGA TCG TCTCC-A TCACGCCCATCGTGT 66 191 LT478_RS11470 2681456 .. 2681476 - -6.7 -2.79133 CAAGGTTTGATTATA CCGAAGACG CAC CGACGTCGG CGGAAACGTGCAAGA 50 457 LT478_RS11460 2680872 .. 2680883 - -7.2 -2.82623 CGGTTGGGACAACTA GGCG GCCT CGCC ATTGCGGGCGGCTTC 50 40 LT478_RS11455 NONE LT478_RS11450 2679060 .. 2679072 - -5.5 -3.9122 GACGTTCGCAAACAA CACCA TCT CGGTG CCCGCGGGAGAGACG 62 500 LT478_RS11440 2677662 .. 2677687 - -13.9 -3.32498 TATGGCAGATAGGAA CGCGCCCGGGG AAGC CCCCGCGCGCA TCTTCAGCGTATCGC 81 90 rlmB NONE LT478_RS11430 NONE LT478_RS11425 NONE LT478_RS11420 2671768 .. 2671789 - -4.3 -3.55622 CCGAACGGCGGGAAA GCGATGCGC GACG ACGCAGCAC CCTTATCACGCTCGG 51 251 LT478_RS11405 NONE LT478_RS11400 2668083 .. 2668129 - -10.1 -2.73364 TGCGGAGTCGAAGGA TCCCGCGCAACGTCAGCTG-GA AGTC TCACGGCTATCGCCGCACGGGA TCCTTCGACTCGCTT 61 72 nrfD NONE LT478_RS11390 NONE LT478_RS11385 2665543 .. 2665585 - -11.1 -3.75153 CGCCCGCAAGCGAAA GCTCGCGC-CCGAGAGGGAG ACAG CGCCCGCTCGGCGCGCGGGT CGCCTACGCCCGCGT 80 29 LT478_RS11380 NONE LT478_RS11375 NONE nrfD 2660580 .. 2660609 - -19.4 -3.48593 CACCTCGTCAGACAA GGAAGGAGCGCG CGAAGC CGCGCTCCTTCC GAAGCGTCCGCGTCA 100 38 LT478_RS11365 NONE LT478_RS11360 NONE LT478_RS11355 2658977 .. 2659017 - -22.9 -3.53444 TCATTTTTTGTCAAA CCTCTGACCAGGTAATATA CAT TATTTTACCTGGTCAGAGG CTCGCAGCAAGATGG 100 67 nrfD NONE LT478_RS11335 NONE LT478_RS11330 NONE LT478_RS11325 NONE LT478_RS11320 2652625 .. 2652638 - -5.3 -2.62184 TTCCCCCTCATATCA GAATC GGCC GATTC CTTCTTGTCATAGTC 46 169 LT478_RS11315 NONE LT478_RS11310 NONE nrfD NONE LT478_RS11300 NONE LT478_RS11295 NONE LT478_RS11290 NONE LT478_RS11285 2644996 .. 2645028 - -2.5 -3.83026 GGCGGGCACATGAAA GGCGACGACGTGC TGGTGAT GCGCTTCGCCGCG CAGGCCGAGTCGCGC 55 229 LT478_RS11270 NONE LT478_RS11265 2642263 .. 2642279 - -2.1 -2.8341 CCAAACAACATAGGA GCGCCAC GGG GTCGTGC TAGTCGGAAGAGGCG 39 51 LT478_RS11260 2641602 .. 2641614 - -4.7 -3.13522 ACCTCTTCATCAAGA GAGGC TCA GCCGC CGTCCACCATATCCT 48 18 LT478_RS11255 NONE LT478_RS11250 2639457 .. 2639515 - -21.9 -4.02302 CGCACATGAAAAAGA GCCTTCTCTCGTCCTTGCTCCTGAGGGC ATGC GCCCA-AAGTCCAAGGACGAGAGAAGGC TCTCGCGGTACCACC 100 339 pheS 2638248 .. 2638270 - -12 -2.53759 AACAGTGCGAAGGGA CGCTTGGCGA GGT CCACCAAGCG AGTTCCGCAGCGCAG 64 89 pheT 2635566 .. 2635597 - -20.9 -3.85704 GGACGAATGACGAAA CCCGCCCCTCCCC TGGAGC GGGGAGAGGCGGG TGCTTTGCGGGACTC 100 134 LT478_RS11235 2634568 .. 2634598 - -3.2 -3.83347 ACATCGGAAAGAGAA GGAAGATCGGGA GATCGCA TCCCACTCTGCC CGTCCCGCCCGCTCC 54 173 LT478_RS11230 2633243 .. 2633299 - -20.9 -3.01712 TTTCCGTGCGCAACA GCTGCACGCCGTCCGACGCCCGC-GCG CTGGC CGCCGCAG-CGCCGGACGGCGTGCTGT CGAGCGACGCGCGCT 100 342 LT478_RS11215 2629580 .. 2629600 - -2.6 -4.74103 GTGCGAAGGCAAAAA CCGTTT TCTGGCACG AAACGG GACGATGTGGCATGA 72 153 LT478_RS11210 2617940 .. 2617970 - -18.3 -4.08557 GCGCCCAAAGAAGAA GACCCCCGCCCAC TCGGT GCGGGCGAGGGTC CTGCTTTTAGGGGCG 100 32 LT478_RS11205 2607984 .. 2608030 - -12.3 -3.29325 GGCCGAGAAGTAACA GATCG-CGCGGGAGAGCCGA CCCCCTCC CCGGCTCTCCCGCGACCGTC GTCGCCCCGAGAACG 76 150 LT478_RS11195 NONE LT478_RS11190 NONE LT478_RS11185 2603170 .. 2603185 - -11.8 -3.01712 CTTCGTTCGGGAACA GGCGCC TGCA GGCGCC TGTTCCCGTTCTCGC 68 87 LT478_RS11165 2598473 .. 2598523 - -14 -3.29144 GGATTCGCCTCACAA GCCGCAACCGACCTCGCAGCCCG ACTGCG CGCGACGCGACGTCGGTTGC-GC ATGCCTGGTAAGATC 81 303 argC NONE argJ NONE argB NONE LT478_RS11145 NONE LT478_RS11140 2592363 .. 2592383 - -7.6 -3.41738 CCGCCAAGAAATATA GTCGACGAC TAGC GTCGTCG-C AGTCGGTCGATGGCG 62 13 LT478_RS11135 NONE argH 2589119 .. 2589132 - -3.7 -4.1721 AGTCACACGGGAAAA CGCCC GGTC GGGAG CTCAAAACGTGGTTG 62 199 LT478_RS11125 NONE LT478_RS11120 2586112 .. 2586135 - -17.4 -3.66178 TGGTCGAATGCGAAA GCGGCAGCCC GAAA GGGCCGCCGC TCAAAGCAGTGTGCG 100 53 LT478_RS11115 2585300 .. 2585316 - -10.1 -3.74693 GCCGACGCGACGAAA CGAGCCC GGA AGGCTCG TAGGAATGCCGTGCG 76 41 LT478_RS11110 NONE acnA 2581416 .. 2581444 - -16 -4.03078 CCAGTATACGACAAA GCGCCCGACCGC TCTTC GCAATCGGGCGC CGACGTTACCTCTTC 100 42 LT478_RS11100 2579232 .. 2579265 - -22.5 -4.67697 CTTGAAAACAAGAAA CGACCCCCCGCCGTC TCGT GACAGCAGGGGGTCG TCAAAGCGCGAAACT 100 199 rplJ 2578564 .. 2578584 - -9.7 -2.71924 TAGTTCCTTTCAAAG TGGTCGGAT CTC ATCCGACCG GTACGTTTCAGCTTT 57 78 rplL 2578095 .. 2578128 - -23.3 -2.91264 TCGGGCACCCAGACA GC-GAGCGACCCCCAG AAT CTGGGGGTCGCTCAGC GTCAGGCACGTTCGA 100 66 LT478_RS11085 2576945 .. 2576975 - -22 -3.71378 TACCCTATACGCAAA GAACCACCGAGGCA CAA TGCCCCGGTGGTTC AAAATCGCACAACAA 100 48 LT478_RS11080 2574879 .. 2574913 - -8.5 -2.52742 ATTTTGCCACAACAT GGGGCGCCGTGCAGCA TCAA TGCCG-ACGGGGCGCC TTACTTTTTCCGCGA 52 7 LT478_RS11075 NONE LT478_RS11070 2572888 .. 2572915 - -24.2 -3.40403 CTCCCCCTACGACAA GGGCCCGCGTCC TTGC GGACGCGGGCCC CCGGTCGCACCGGCG 100 105 feoB 2569808 .. 2569834 - -19.5 -3.53012 GCGCCGCGCGCGAAA GGCTCCACCGG CGCCC CCGGTGGAGCC GACCCGGCCTACCGC 100 34 LT478_RS11050 2564852 .. 2564905 - -11.1 -3.01712 CCTCGCGCTCGAAGA TGC-GG-CGCGCTGCGCGAACATGG GCCTCT CCACGTTCAAGCAGCGCTTCCTGCA CGCCTATGGGCTGTC 65 262 LT478_RS11025 2560547 .. 2560559 - -4.7 -3.64599 CCATGATACCCCAAA GCGGC TGC GCGGC GCGACGGCGATGCCG 54 69 LT478_RS11020 2559718 .. 2559741 - -11.6 -2.73721 AGGAAGGGCGAACGA GCGCGCGCGC CGTT GCGCGAGCAC GTCCCGTTGCGCACG 65 121 LT478_RS11015 NONE LT478_RS11010 2555579 .. 2555591 - -4.1 -3.39327 CGGCTACACCGACAA GATGA TGG CCATC GTGGCGCCCGCCGCC 49 390 LT478_RS10995 NONE LT478_RS10990 NONE LT478_RS10985 2552703 .. 2552747 - -22.2 -4.25104 CCGGGCGCATGAAAA GAGCCGCACCGCAGGCTCCT TCCGG AAGTCCCTGCGGTGCGGCTC TGCGTCGAATGCGTC 100 70 LT478_RS10980 NONE LT478_RS10975 2549045 .. 2549067 - -14.1 -3.62046 CGATGGTTCCAACAA GGGCAGGGC CCATC GCCCCGCCC GCCTTCCGGCCCGTC 88 52 LT478_RS10970 2548356 .. 2548395 - -6.3 -2.52543 AGCCCTCCGAAGCGA CGAGCGCGACGGCCTTCA TCACG CGATCCCCG-CGCGCTCG AAGTGCTTCTTCAGC 45 4 LT478_RS10965 NONE LT478_RS10960 2545972 .. 2546027 - -21 -2.75481 GCTGAAGTGGAAGCA CCGCGGC-GGCTCCGAGGCGAGCGGCG ACG CATCGCCCGCATCGGCGCCCGGCGCGG CAACCGCCCTGCGCG 100 73 ahpC 2541137 .. 2541162 - -18.3 -4.1466 ACGTAAGCGCGAAAA CGCCCGACCCC GCAG GGGATCGGGCG CCGATCGGTTCCGCT 100 69 LT478_RS10910 2535517 .. 2535531 - -3.4 -3.74178 TAAGGAAAGCGTAAA GGCCCG CAT CATGCC AGCTTGAAGCCGATG 54 19 LT478_RS10905 NONE LT478_RS10900 NONE LT478_RS10895 2532398 .. 2532410 - -4.8 -3.7282 CTACGCCACGAAGAA CGTG TGCTC CACG CTGACCATCCCCTTC 58 385 LT478_RS10880 2525742 .. 2525761 - -5.6 -3.59247 GAACAATGGCGCAAA GGGCG-AGC GAA GCGACGCCC GTCAGGTTGAACCAC 57 319 LT478_RS10875 2524609 .. 2524638 - -9.2 -3.6869 GAGAGCAAGCCCAAA CTCCCGCCAACG AGGGTG CGCAAGCGGGAG CGACTCGCACCCTAC 68 37 LT478_RS10870 2522990 .. 2523017 - -8.4 -2.97423 GGGAAGAACAGGAGA TC-GAGCCCTCGC AAC GCGAGAGCGCAGA ACGAGCTTCCCGGAT 55 116 cysK 2521778 .. 2521801 - -13.9 -3.21747 GGATCTCATGACGAA GGGGTCTGC CACGCT GCAGACCCC TTCTCGTTCGACTTC 78 51 LT478_RS10850 NONE LT478_RS10845 2518172 .. 2518197 - -3.2 -2.94099 CCTTGTCATCATAGA GTCGTCGAAT TCCGGG ATTCGCCGGC ATCGCCGGGCTCATC 42 36 LT478_RS10840 2517226 .. 2517253 - -7.1 -3.27766 AAGAGGCGAGATCAA GTGCATCGACGCT TCGC AGCGTCG--GCAC GTTCCGCTGTCCGTC 56 39 LT478_RS10835 2515811 .. 2515856 - -9.8 -2.78384 GCCGCTTTCATTATA CAGGCATCACCAGACGCGTAT CTCTC ACAC-CACCTGGTGCCGCCTG AACGCGCAGGCGGCC 61 4 LT478_RS10830 2514676 .. 2514704 - -14.5 -3.28712 GCTGGCGTTCTACAA CGACGAGGGCGAC ATC GACGCGCTCGTCG ACGGCCTGGACGGCG 83 494 LT478_RS10800 2509297 .. 2509307 - -2.4 -3.05463 ACCCGTTTCATGCAA CTCC TTC GGTG GAACCCGATACGCTG 41 127 crtI NONE LT478_RS10790 NONE LT478_RS10785 2505206 .. 2505216 - -2.4 -3.4252 CGGCACCCATGACAA TCCC GAA GGGG CAGATGGGCGACGAA 47 196 LT478_RS10780 2503903 .. 2503934 - -6.5 -2.78463 ATGCCGCTCAGTATA CCCCGCGTCGCGAC GTCAG GACGCGACG-GAAG CCGCAGGCGGATTCG 50 9 LT478_RS10775 2503181 .. 2503203 - -9.1 -4.08216 TCATCGCTTCGAAAA CACGCCTCA CGCGC TGTGGCGTG TTTTTAGGGCGAAGA 76 61 LT478_RS10770 NONE LT478_RS10765 2501308 .. 2501342 - -7 -3.61398 CGCGTGCTTGAAGAA GTCGCCGGCTGACG AAGAGCG CGTCAGGCGGAGGC GAAAAGCTGCCGGCT 60 14 LT478_RS10745 2496248 .. 2496270 - -3.3 -3.1637 AGATAGCTGGACGAA TGCAGCGCA AGGTG TTCGCTGCC GGCTTGTCGACGAGC 45 68 LT478_RS10735 2494300 .. 2494321 - -14.5 -2.52464 TCCCCCTTTAACGCA TAACGCCCG CCGA CGGGCGTTA TGCGATCATGCTTTG 76 508 LT478_RS10725 2492304 .. 2492316 - -3.3 -3.63991 GATCATCGCGAAGAA GAAGG CCA CCTAC TACGGCATCGCCATG 51 285 LT478_RS10715 2490055 .. 2490067 - -10.5 -2.57013 TGCCAACCGAAGGCA GGCGC GGT GCGCC GTCGGATCGTACGTG 58 432 LT478_RS10705 NONE fdhF 2485108 .. 2485136 - -8 -4.08317 GAATTGGAAATGAAA CGGGAGGGATGC GACGG GCGCCCCTCCCC CAACAGCCTACGCCT 71 33 LT478_RS10695 2483938 .. 2483969 - -22.4 -3.22298 TTGATCTAGCATGAA GAAGGCCTCGCCGC GGGC GCAGCGAGGCCTTC GACGCATCGGGTCGA 100 48 LT478_RS10685 2482666 .. 2482691 - -6.1 -3.60627 CGATCTCATCGGAAA GGAACGC-GCCG TCG CGGCAACGTTCG GGATCCTGTTCGCCC 57 63 LT478_RS10675 2480078 .. 2480097 - -6.4 -3.5764 AAGTGCATGTTGAAA TCCATCTG CGAG CAGATGGG CTTCGATTCGCTAGG 59 139 LT478_RS10660 2475969 .. 2475994 - -4.5 -3.55622 GCCAAGCCCTTCAAA GCGCACCTCAC CCTC GCGCGCCGCGC CCGCATCCCGCACGT 51 179 LT478_RS10635 2471259 .. 2471271 - -3.3 -3.72141 ACAGCGATACGGAAA GCGTG AAA CAGGC GCTACGCAAAACGCG 54 329 LT478_RS10630 2470705 .. 2470715 - -2.4 -3.18582 CAGCCCACCTAGCAA GACG TCC CGGC TTTGTGCTCGATGCG 43 8 LT478_RS10625 NONE LT478_RS10620 2469954 .. 2469975 - -6.5 -3.767 GAGGCAGGGACGAAA GGCC-ATCCG GGG CGGGTCGGCC AGCAACCCCGCAGGG 63 61 LT478_RS10615 NONE LT478_RS10610 NONE LT478_RS10605 2467623 .. 2467638 - -3.2 -3.21395 ACGCCGTCTATAAGA TGATCG AACG CGAGCA GATCCCCTCCATCAA 45 267 LT478_RS10565 NONE LT478_RS10560 2455228 .. 2455244 - -2.9 -4.05607 ATACCAGAAGAAGAA TCGCAAA AAC TGCGCGA AGCGTTCTATAGCCC 58 195 LT478_RS10535 NONE LT478_RS10530 NONE LT478_RS10525 2446675 .. 2446698 - -2.3 -4.56597 TGTTGCTTTGAAAAA GGGCGCTAGG CGATT CCC-GCGCGC TCGAGGTGCTTTTTG 66 7 LT478_RS10520 2442582 .. 2442606 - -7.7 -2.78596 CAGCCCGCGACGAGA TGGAGCGCGCC CTC AGCGCGCGTCA CGACGCCCGGACGAT 51 383 LT478_RS10510 NONE LT478_RS10505 NONE LT478_RS10500 NONE LT478_RS10495 NONE LT478_RS10490 NONE LT478_RS10485 2435750 .. 2435760 - -8.2 -3.76413 CCCCAAAACGCCAAA CCCC ATT GGGG GTTGCCCGACTGGAG 67 183 LT478_RS10480 NONE LT478_RS10475 NONE LT478_RS10470 NONE LT478_RS10465 2431298 .. 2431335 - -10.6 -3.65812 CCTTGCCGAAGAGAA TCCTCGATCCGCTCCA GGCAGG TGGAGCGGATCTCGAA AGAATCCGTGTAGAT 73 121 LT478_RS10460 2430621 .. 2430659 - -29.1 -2.88758 AGAAGGGCCGACATA GCAAAGCGGCCCTCCGA CCGAT TCGGAGGGCCGCTTTGC GGCAGCGAACAATTT 100 128 LT478_RS10455 NONE LT478_RS10450 NONE LT478_RS10445 2428457 .. 2428470 - -4.5 -2.52464 CGTGTTCCGAAGCCA GC-CGG CAT CCGTGC TCTCGCAATGCCTGG 42 119 LT478_RS10440 2427874 .. 2427904 - -13.3 -4.07568 GCCGTCTTCGGAAAA CAGAGAAGGCGGG GTGAA CCCGCCTTCCATG AGCTTGCTCAGCGAG 95 33 LT478_RS10435 NONE LT478_RS10430 2425413 .. 2425428 - -6.1 -2.70932 GCCGCGCTCGAACGA GGGAG TGTCGG CTCCC GCCGTCCCATCTCTC 46 39 LT478_RS10425 NONE LT478_RS10420 2424616 .. 2424630 - -2.8 -3.08679 TGGTCTTATCGAACA GGAG CATTCGC CTCC GCCCCCTTCCTCTTC 41 1 LT478_RS10415 NONE LT478_RS10410 NONE LT478_RS10405 NONE LT478_RS10400 NONE LT478_RS10395 NONE LT478_RS10390 2415072 .. 2415105 - -16 -3.89614 CTGAACCTCCAGAAA GACGGGCGGGGAGGC TCATC GCCGCCCCGCCC-TC TTCGATCAGCCGAAA 95 47 LT478_RS10385 2414112 .. 2414137 - -8.9 -2.84098 TGCCCGAACGAACGA GGTGTCCGGGC CATA GCCCGGAAACA GGAGCCGGAGAGGCG 59 207 LT478_RS10330 NONE LT478_RS10325 2403803 .. 2403840 - -13.6 -4.19927 AAAATCAGACAGAAA CTCACAAGGCTCCTCGA GAAAA TCGAGGAGCCTTGTC-G TTTCCGCAGGTAAAC 100 351 LT478_RS10310 NONE LT478_RS10305 NONE LT478_RS10300 2398411 .. 2398456 - -23.3 -3.15249 GATAGGCGGTATGAA GTCCCTGCCCCGCCGCCTATC GCGC GCGAGACGGCAGGGCAGGGAC GTCGGGACGCGTTGT 100 150 LT478_RS10290 NONE aroF 2396021 .. 2396060 - -23.6 -2.92668 AAAGTTTTTACAAAC GGGGCGCGTCCGACGGTT TCCG AGCCGTCGGACGCGCCCG ATTCCTTACACGATC 100 31 LT478_RS10280 2394107 .. 2394125 - -6.6 -3.60792 CCGGCAACTGGCAAA CGCGCGCA ATC TGCGCAAG CGCAGGGGCCGCTAC 60 37 LT478_RS10275 2391552 .. 2391587 - -14.1 -4.64657 CGAAACGCCTAAAAA CGACGAGG-CCGCACCG TTTC CGATGCGGGCCTCG-CG CTAGCCGATCTTGAC 100 26 LT478_RS10270 2390465 .. 2390493 - -18.1 -2.70932 CCCGGGGTGCAACTA GCGCGCCGGCCGA GGC TCGGCCGGCGAAC AACCGGAACGGGCAT 86 83 LT478_RS10260 2387143 .. 2387166 - -14.6 -3.72576 GGCCCCCTTAGCAAA GAAGCCGCGG CGTT CCACGGCTTC CTCGTCTCGTTTTTC 89 68 LT478_RS10250 2385820 .. 2385863 - -6.5 -3.54741 CACTACGTGCCCAAA CGCGCGCTGTCGAGCGTGCT GCTGT AGCCCGCACC-CGGCGCACG CCGCCCGGGCATCGC 58 45 LT478_RS10240 2383794 .. 2383844 - -11.7 -2.78384 GCGGCGGCGAGCACA GGGCCGTGCAGTACAGCGCCGCA TCGAG CGCGGCGGCTTCCTGCACGATCC GAACCGCGTCGCCGC 65 176 rpsL NONE rpsG NONE fusA NONE rpsJ NONE rplC 2379289 .. 2379310 - -4.3 -2.73483 AGGTTACTTCAACTA CGCCATGCG GACG CGAACGACG CCGTTCTTGCCGCCG 43 1 rplD 2378640 .. 2378656 - -4.3 -3.09516 TCCTTCATTATGCAA GCACCTC CTC GATGCGC TTCAGGGCGTCGGCC 46 1 rplW 2378302 .. 2378327 - -19.7 -5.4505 TCCTCCAACAAAAAA GGCGCCCCCGC GATT GCAGGGGCGCC GAGGCAGCACGTGGA 100 49 LT478_RS10190 2375321 .. 2375349 - -21.8 -3.96327 ACCCCGCATGAGAAA GCCGCCGCAAGC TTCGT GCTTGCGGCGGC TTCGCGTTCGCTTGG 100 53 LT478_RS10185 2373052 .. 2373082 - -4.5 -3.05596 GATGCGCGCAGCGAA GCGCGGCAGGCTG CTATC CCGCATGACGCAC CTCCTCGTCGATCCA 46 8 LT478_RS10180 2370971 .. 2370991 - -4.6 -2.87344 CACCCTCGTCAGAGA CCGACGACG GAAG CGGCG-CGG CGCGATCAGCCGATG 45 31 ruvC NONE ruvA 2369606 .. 2369620 - -10 -3.17714 TGAAAGCCCGACGAA GCGTAC TTC GTACGC GAGGAGGGCTTGGAG 65 74 ruvB NONE LT478_RS10160 2367753 .. 2367775 - -4 -3.02511 TGCATGGCCGCAACA CTCGCCCTCA CCT CGAGGGCACA TGCTTACTATACGCT 43 112 LT478_RS10155 2367436 .. 2367458 - -17.8 -5.24129 CTCTGCCATAAAAAA TGACCCCGCA CTT TGCGGGGTCA TTTCAGCATTCTATA 100 52 LT478_RS10130 NONE tgt 2362242 .. 2362262 - -3.9 -3.29144 GCAGCTTCGGCAGAA GCCTGAACC CGG GGTTCACCC TTTTGTGGGGCGCTC 47 374 LT478_RS10105 2357903 .. 2357955 - -14.1 -4.24326 AAAGATCAGGGAAAA GC-CCAGCGTCTGCGCGCGGATCGG AAACG CAGGTC-GCGCGCAGGCGCCGGTGC GGTGCTCAGCCTTCG 100 31 secD 2355034 .. 2355055 - -12.9 -5.02074 CGATCGGGCAAAAAA CGGTCCCGG ATGT CCGGGGCCG TTCGGCGCTACTTCT 100 33 LT478_RS10085 2352711 .. 2352733 - -5.7 -4.25104 CCGGCGGGAGGAAAA GTC-GTAAAC TATA GTTTACAGAC CGTCAATAAAACAAG 68 313 LT478_RS10075 2352369 .. 2352392 - -11 -3.72893 GACCGGGCGACGAAA CGCTCACGTT CTTC ACCGTGAGCG AACCCGAGGCATGGC 77 92 LT478_RS10045 NONE LT478_RS10040 2346000 .. 2346010 - -8.2 -3.24747 CCGGCACACGACGAA GCCG TTT CGGC AGAGGTACTTTCGCA 57 169 LT478_RS10035 2344433 .. 2344462 - -19.3 -3.66178 GCCCCGAACGCGAAA GGGCCCCGGCATC TTTC GACACCGGGGCCC TCGCCGTCGCGCTAT 100 53 LT478_RS10030 NONE LT478_RS10025 2341008 .. 2341020 - -6.9 -3.18274 CCGACGCGAATCCAA CGCGG TTT CCACG AAAGCAGCCTTCGTT 54 75 LT478_RS10020 2340542 .. 2340552 - -3.2 -3.73953 ACTACTCGTACGAAA TGAC GCT GCCA TCCTCATTGGATATC 54 1 LT478_RS10015 2339749 .. 2339784 - -13.2 -2.78547 CGATGCGACGAAGGA CGCGCAGGCGGCGAAGC GGG GCCTGGCCGTC-GCGCG CGACATGATGCTGAG 68 275 LT478_RS10000 NONE LT478_RS09995 2336693 .. 2336710 - -5.5 -2.50074 TCTCGTAGAACAGAT CGCCTAT CTTC ATGGGCG CGCCCCTTCCCGACC 45 17 LT478_RS09990 2335056 .. 2335093 - -19.2 -4.76191 AGACAGCAAAACAAA GGCTGCGCGACCCC GTGTTTGGCG GGGGCCGCGCAGCC CGTATTCGCTACGCA 100 444 LT478_RS09985 NONE LT478_RS09980 2331884 .. 2331897 - -3.8 -2.53759 AAGATCGCCAATGCA GCCA TGATCT TGGC CACTTTCGGATTGCT 40 75 LT478_RS09975 NONE LT478_RS09970 NONE LT478_RS09965 NONE LT478_RS09960 2327850 .. 2327881 - -5.7 -4.56597 CCGTGTCGGTAAAAA CGGGGCGGTTTGG TAATCT CCAATGCGCCCTG CGCCACCGATTCGCG 74 239 LT478_RS09955 NONE glpK NONE rpiB 2324588 .. 2324600 - -10.5 -2.80113 GATCATGCTAGCACA GCGCG ATC CGCGC TGCGCGCGTGCGGGC 61 40 LT478_RS09940 NONE upp NONE LT478_RS09930 2321872 .. 2321888 - -2.2 -3.41051 CGACTCGTATGATAA CGGAAC TTCAC GTTCGG CTGACGGCAGGGTTA 44 257 LT478_RS09925 NONE atpB 2320664 .. 2320688 - -3.4 -2.99837 GGTCAAACACCAAAC GTTGC-CGCGC GCAG GCGCGTGCGCC CTCCCCTTTCGGAAA 43 56 atpE 2320318 .. 2320347 - -3.5 -3.05816 TTACCTCCTATGTAA GCCTTATACGG CACGGTAT CCGAATGAGGC TTAGTTACACGATGA 43 30 atpF NONE atpH NONE atpA NONE atpG NONE atpD NONE atpC 2314651 .. 2314677 - -18.1 -5.04385 CATAGCCGGAAAAAA GGAAGAGCCCC GTGCG GGGGCTCTTCC TCATCTTGCTCGTCA 100 106 LT478_RS09880 2311887 .. 2311933 - -24.6 -2.63913 GACGATTCTAGACGA TGTCCGTTTTTCTCGGGCAGGC TTC GCCCGCCCGAGAAAAACGGATT GATACACCAACTTTC 100 382 LT478_RS09875 2310424 .. 2310450 - -16.6 -3.50832 GCCCAAACCGAAAGA CTGCGGGAGCCC GAC AGACTCCCGCAG GGCGCCGGTAGGCCG 100 106 LT478_RS09870 2309602 .. 2309658 - -5.1 -3.1512 AAACAGCGAACAAAC GATGGTTTTTGC-GCGAACGCCGCCCGC AGCA GCAGGCGGCGTTCGCAGCGCT--CGATC CGCCGCTTACGAGAC 48 32 dnaE 2305863 .. 2305899 - -16 -4.01888 AGCCGACATCATAAA CGAACA-CGCCCCCTCT GCGA AGAGGGGGCGCTATCCG CTTGCCAAATTGTTT 100 169 truA NONE LT478_RS09855 2304145 .. 2304168 - -12.4 -3.51232 GGCGGCGTAAACGAA CGAAGGGCCC TACG GGGCTCTTCG CGTTCGCTAGGCGAG 79 32 LT478_RS09845 2300243 .. 2300266 - -19.6 -4.05788 GCGCCCGAAACGAAA CGGAGCGCCC CGAA GGGCGCTCCG CGCGGATGCCGCGTA 100 52 ychF 2298150 .. 2298177 - -17.1 -4.56597 CGTTTCCGTTAAAAA CCGAACCCCCT GTTCAA AGGGGGTTCGG GACGAATTCCTTACA 100 36 LT478_RS09830 NONE LT478_RS09825 NONE LT478_RS09820 2293045 .. 2293071 - -12.9 -2.71712 TCGGTTGGGGCAAAG GCGCCGCCGCG CTCGC CGAAGCGGCGC GTCGTGCATCTCCCA 69 111 LT478_RS09815 2291618 .. 2291649 - -6.4 -3.55444 CCGCCACCCTCGAAA GCGCCCGCGACCTG CTGG CAAGCTGCGAGCTC ACCGACCAGCAGCAA 57 85 LT478_RS09795 2286142 .. 2286157 - -11.8 -2.83409 GATGAAGCGATGATA GCGCGC CCCC GCGCGC CACGCGTGGCGGTTG 65 135 LT478_RS09790 2285342 .. 2285384 - -17.1 -3.53012 TTCCTCCTGCGCAAA CGCGCAACGAAGGCCCGCGGC GTT GCCGCGGGCCTTC-T-GCATG CCAAAGTCGTTACGC 100 35 gatC NONE gatA NONE gatB 2278861 .. 2278894 - -26.8 -3.47322 CTTTACGAGAACGAA GCGCGCCGCCGCCT ATCCCG AGGCGGCGGCGCGC ATGCTTACCCGAGCT 100 30 LT478_RS09755 NONE LT478_RS09750 2276880 .. 2276920 - -26.4 -4.56597 TCGCCTTCCGAAAAA GCAAGGGTCGTCCCGCTCG GTTG CGAGCGGGACGACCCTT-C TTCCGCAGAGAGTCG 100 63 LT478_RS09745 2275443 .. 2275455 - -5.5 -4.65916 TTTAGCCGAAGAAAA GGACG CTG CATCC TATCGATTCCCCGCA 79 421 hisZ NONE hisD NONE hisC 2270992 .. 2271034 - -9.9 -2.52635 AGGGCGAGGACGAAG CGCGCCCCGAAGGAAGTCCCC GTA GGGGA-TAC-TTCGGTACGCG AGTCCTCGACCTCGC 60 121 hisB NONE hisH NONE hisA 2268605 .. 2268621 - -5 -3.17075 TCGTTGCTAACGCAA CGACGG ACGTG CCGACG CTGCGCGGGTACTTC 48 157 hisF 2267795 .. 2267808 - -2.3 -3.53012 CGTTCGCTCCGGAAA CGAGG GCCG CCCCA CCCCTACAGCCGCAC 47 29 hisI 2266974 .. 2266984 - -2.4 -3.66556 AACGGCTCAACATAA GCGG AAT CCTC GGGCCTCGCTGCACT 49 63 LT478_RS09695 2264478 .. 2264495 - -10.5 -3.64599 CTATTACAGGTGAAA CGCGCGC GACG GCGCGCA TGGATTCCGTGATGA 73 201 fsa NONE rho 2262051 .. 2262069 - -12.4 -3.12999 GTATGCGACAGGGAA CCGCACCC AAC GGATGCGG TTCCCTGGTGGTTTC 74 97 sppA NONE LT478_RS09675 2258861 .. 2258889 - -21.7 -3.76125 GCACGTCAACCGAAA GCGCCCGCCCGCA TTC CGCGGACGGGCGC TCTTCATCCCGAAAA 100 75 LT478_RS09660 NONE LT478_RS09655 NONE rnhA 2252870 .. 2252885 - -2.5 -3.32727 GGAACATCATACGAA CCTCGG GTGAG CCG-GG TGCAGCTTCGGAATC 44 46 LT478_RS09645 2251596 .. 2251621 - -17.7 -3.61356 AGCATGCACCCGAAA GAAAACGGCCC CGAA GGGCCGTTTTC TTTCGCTTGAGGAAT 100 47 LT478_RS09635 NONE LT478_RS09630 2247871 .. 2247894 - -7.4 -3.14132 CGGTCGTTCGACCAA GCGGC-GATCG CCT CCATCGGCCGC CAGGTCATCGACGCG 55 418 LT478_RS09615 2245391 .. 2245433 - -15.6 -3.83026 CCGCGTCATAGGAAA CGCGCACGCGGCATCG-CG CCGCGC CGTCAACGCCGCGTGCGAG GGCTTCTCCCGCTTG 95 9 rpsB NONE tsf 2241806 .. 2241824 - -3.7 -3.5121 ACCATTATAAGAACA GGGAGGC TGCGC GCCCACC ATCATCACAACGAAA 49 251 murA NONE LT478_RS09590 NONE LT478_RS09585 2238605 .. 2238634 - -2.1 -3.53012 CCTTCGCCTTCGAAA TCGATCCGG TTTACAGGTCGG CCGGAACGA CCTTCGTCACGCCGG 47 6 LT478_RS09580 NONE pdxS 2237180 .. 2237199 - -5 -3.64822 ACTTCGGTACGCAAA CCTTCG-AC ATC GCGCGAAGG CGGGGCACCTCGGTG 54 91 pdxT 2236461 .. 2236481 - -4.5 -3.59979 TCCCGCGATTGGAAA CGCCCCGGC AAC GCAGGAGAG GCTCCTCACGACCCG 54 31 LT478_RS09565 2236127 .. 2236153 - -18.8 -5.37043 ACCGCATAGAAAAAA GTTCCGCCGGCA CGA TGCCGACGGAAC CGCTACTCAAGGCCC 100 28 lgt 2235174 .. 2235212 - -13 -2.62246 CGAACCGTAACCAAT CGCACGGCTTAGCGAGTC GAA GCCTCGAGGAGCCGTGCG TTCGATTCCCTTATA 68 43 LT478_RS09555 2234622 .. 2234648 - -23 -4.56914 CGACGCAAACGAAAA CGCCCGCCCCGC GAA GCGGGACGGGCG CGTCATGCGCGAAAC 100 51 pyk NONE rhaD 2231420 .. 2231435 - -4.6 -3.18467 AAATTCCCAACCTAA GCGAGG AACG CCTCGT TCACCGGAAGATGAT 48 6 rpmE 2230799 .. 2230821 - -20.6 -3.18383 ACCTGGACGCACGAA CGGCCCGGTC ATC GACCGGGCCG TTCGCTGTGCTTGCT 95 50 LT478_RS09510 2224094 .. 2224104 - -3.2 -3.52177 CCCGAAAAAACGGAA TCGC AGG ACGA AGCGTGTTTTTCGGA 49 59 LT478_RS09505 2223192 .. 2223232 - -13.2 -2.93073 CGCTTGGAACAAGTA GAGCGCGTCCCGAACGGC CGATC GCCGTTCGGGACGTTTCC AATCGCAGGCTTACA 75 36 thyX NONE LT478_RS09490 2220030 .. 2220068 - -7.3 -2.57243 GCATGAGTATAACAG CGAGGGGGGGGG-GGCAA GCGT TTTCCGCCCGCACCCCCG ATCGAGCGCTCTACG 49 36 LT478_RS09485 NONE LT478_RS09480 2217982 .. 2217993 - -3 -4.07568 GCTTGTTCTTGAAAA TCAT CTTC ATGA CCAACCTTCTTTCTT 57 65 LT478_RS09475 2216976 .. 2217011 - -6.1 -2.79183 GGGAGCTTGACGATA GCGGAATCGGTCGCGT TCCAT ACGAAACCGGT-CCGC GCCTCCTATCGAATC 46 31 LT478_RS09470 NONE LT478_RS09465 2215278 .. 2215288 - -2.4 -2.75535 CGAAGATGTCAAGCA TGCG CCC CGCC TCCCTCTTCCTCGCC 39 8 LT478_RS09460 2213557 .. 2213592 - -3.8 -3.06492 TGACCCAGGTGAACA GCGCGGCGATATCGCT CATC AGCGATCCTTCCGCCC GTCGTCGGTCGTGGC 43 8 LT478_RS09455 2212787 .. 2212817 - -16.2 -2.87211 ATTTTGCCGCACATA GGGCCGCCGC-TG TTGTCG CATGCGGCGGCCC CGGTCGGCGGAACGC 81 121 LT478_RS09445 2211633 .. 2211647 - -4.2 -4.03234 GCCGCGCGAGAGAAA TTGCCA AGC TGGCGA AAACGGACGCGCTAG 61 37 LT478_RS09440 NONE mdh 2207808 .. 2207835 - -11.3 -4.56775 ATGCCTCCCTAAAAA CGGAAACGCCC GCAAAG GGGCGCTTCCA AGCGTTCGCTTCGAT 95 59 LT478_RS09430 NONE LT478_RS09425 2205561 .. 2205582 - -2.2 -3.1506 AAATCTTCCCATGAA CGCATACG CTCGCC CGCATCCG GCGTCCCGCCGCACC 43 260 LT478_RS09420 NONE LT478_RS09415 NONE tmk NONE holB NONE LT478_RS09400 NONE LT478_RS09395 2198910 .. 2198923 - -2.3 -2.62396 TACCCTCGTACACTA CGCGA TGCC CCGCA GCTTCACAACCAGAT 38 9 LT478_RS09390 NONE LT478_RS09385 2196904 .. 2196919 - -2.5 -3.07307 GAAAGTTCCATCTAA GCACC TTTCCC GATGC GTTCGAATTCCATGT 41 64 LT478_RS09380 2195818 .. 2195832 - -5.6 -4.15044 GCGTCCTGCAAGAAA GTCCCC TCA GGGGAT ACTTCGGTACGCGAG 68 121 LT478_RS09375 2194559 .. 2194590 - -8.6 -2.73542 TCGAATTCGGAAGGA CGAGGCTCATCGAA CCCG CCCGGTGCGCCTCG TTGGAATCCAGCCGC 53 199 LT478_RS09360 2190173 .. 2190211 - -12.2 -2.57132 CGTTTCTTCTAGAAG CGACCAGGGGGTTGGCCG CCG CGGCCCACCGGCGGGCCG ATTAAGACTTCTTGA 68 27 LT478_RS09350 2189239 .. 2189290 - -2.4 -4.08767 CCGACGTTCCGAAAA CCCGCCTTCAGCATAGCGCCT-GTT TACGG AACGACGCGCT-TGC-GAAGTCGCG TCCCTCGCCCGGCAA 57 135 LT478_RS09345 2185430 .. 2185445 - -2.5 -3.04144 CCGGCAGGTTCAAGA TGCCC GATCAG AGGCA GAAGCAGGGGCACAC 41 17 LT478_RS09340 2184515 .. 2184535 - -3.3 -4.15565 TCCAGCAGCGGAAAA GCCGATCC GCCGCT GGAT-GGC CGTTGGAAAAGCGCC 62 54 LT478_RS09335 2183082 .. 2183093 - -3.6 -3.39327 CCCGCACATCGAGAA CGCG CATC CACG CATCACCCCATCACG 47 28 LT478_RS09330 NONE LT478_RS09325 NONE LT478_RS09320 NONE LT478_RS09315 NONE LT478_RS09310 2173361 .. 2173392 - -17.3 -3.14132 CCCGCCCTCGACGAA GGCCCGACGCGCA TCGAAC CGCGCATCGGGCC TTCTCTTTTAATGCG 89 81 LT478_RS09300 2172398 .. 2172428 - -3.1 -4.48317 GGATAAAAGAAAGAA GCTCGGCAGCCGC GTGAG GCAGCTGCGATAC GAGCATCAGATCAAT 69 156 crcB 2171637 .. 2171682 - -23.3 -3.12351 GGGCGCGAGATCGAA GGGCGTAGGGGCGTGCG-CGCA GAG CGCGGCGCCCGCCCCTACGCCG CGGCCGAGCCGGTCA 100 18 LT478_RS09245 2161774 .. 2161787 - -6.7 -3.90316 ATCGCTCGAAAAACA CGGAA TCGC TTCCG AAAACGTGTTTTTCG 65 104 LT478_RS09240 2161557 .. 2161584 - -10.5 -4.39166 CCCTAGATACGAAAA GGGCCACCAGC GAAAGA GCCGGTGGCCT GGTGTTCCGTGGAGC 87 35 LT478_RS09235 2159221 .. 2159236 - -7.5 -3.57144 CGTCCCACCGGCAAA GCGGC TACGTC GCCGC GGTCGGCGTCATGCT 63 433 LT478_RS09225 NONE LT478_RS09220 NONE LT478_RS09215 NONE LT478_RS09210 2155319 .. 2155337 - -2.3 -3.75153 CGCGCCCAAGGGAAA CCTGCGTC CGCG GCCGC-GG CTCGCGCCGAGCGCT 52 63 LT478_RS09205 2153879 .. 2153907 - -5.1 -3.62046 GTACCGCTTCAACAA GGACGGGCTCTAC TCC GCGTAGCCCGTCG GCCCGGCCGGCTCCT 54 6 LT478_RS09200 NONE LT478_RS09195 2151400 .. 2151428 - -2.4 -2.64616 CTCTCAGCCACAGCA GCAGGCGAACG TCATGCAT CGT-CGCCTCC GAAGCTCGCGCCGAA 38 8 LT478_RS09190 2149764 .. 2149821 - -6.8 -2.57132 GCGTTGGGCGAGAAG CGCCCCGCCGCTGATCGCGCTCG-ACGAC CTC GGCGCGCGAGCGCGG-CT-CGGAGGGTCG TCGTCGGCCGAACTC 49 114 LT478_RS09180 2147906 .. 2147959 - -17.4 -3.59698 TCAGGTGATATATAA GCGTGCAGCCCTGCGGTCGCACCG GAAAGG CGGCAGAACCGCAGGGTTGCACGG AAGCGACGAGCGCGC 100 41 LT478_RS09175 2146180 .. 2146190 - -6.8 -4.18018 TCTCTCGACCGAAAA CCGT CGC ACGG CCTCCCCGCCGCCCG 71 259 LT478_RS09170 2145602 .. 2145620 - -3 -3.72893 TATTTTCTGATGAAA CGTCCGAC CTG GGCAAACG CGCGAAGGCGGAACT 52 162 LT478_RS09165 2144908 .. 2144942 - -4.9 -2.66435 AGCGGTAGTACAGCA GGTAGCACGCGAGGCT GGTC AGCAGCACG-GCCACC GCAAGCGCTCCCAGC 43 86 LT478_RS09160 NONE LT478_RS09155 NONE LT478_RS09150 2141566 .. 2141583 - -7.1 -3.08813 CTTCATGCTAACATA TTGCATT ACGT AATGCAA TCACTATATGCCGCA 52 70 LT478_RS09145 2141203 .. 2141216 - -3.8 -3.04144 CGTTGACGTCGAACA GCAC CTTCAT GTGC GAACGCCTGGACGGG 43 18 LT478_RS09140 2140245 .. 2140278 - -16.8 -3.14564 GCAGCGCGGCAGCAA GCGCGTCATCGTGT TCACCG ACACGAAGACGCGC GCCGAGATATGCACC 85 513 LT478_RS09110 NONE LT478_RS09105 2131488 .. 2131504 - -8.7 -2.62184 GGCGCGCTCACAGCA CGACCTC GTT GAAGTCG CTGCGCTGCGCCTCG 56 1 LT478_RS09100 NONE LT478_RS09095 2129750 .. 2129784 - -19.4 -3.55203 AAAACGCTTCGTAAA GCGGCCTGAAAGGGAA CCA TCCCCTTTCAGGCCGT CGCCTCCCTACAAAA 100 33 LT478_RS09090 2128262 .. 2128272 - -6.8 -3.20382 GTGCAGAGCGATCAA CGCA GAA TGCG GACGAGCTCGATGCC 54 11 LT478_RS09085 NONE LT478_RS09080 2125775 .. 2125801 - -13 -3.64703 TTTCCTGCAGGTAAA GAACCCGGTGCA TGA CGCATCGGGTTC TTTTTTTACCTGATC 82 447 LT478_RS09070 2122727 .. 2122750 - -17.4 -5.00884 ACCGGGCGCAAAAAA GCGACGGGCC CGGA GGCCCGCCGC TTTCGCATATCGACT 100 53 LT478_RS09060 2120076 .. 2120115 - -15.9 -3.85698 CTTCCCCGCCATAAA GAAAGCCCCGGA-CGCGCG GTGT CG-GCGTTCCAGGGCTTTC GAACGTTCGGGAGGA 95 49 larB NONE LT478_RS09050 2118626 .. 2118672 - -18 -3.16935 AAACACTCTGACGAA GCGCTACGACGCGGAGCGGC GGAGCGG GTTGCTACGCGTCGTAGCGC TGCACGAAGTGGAGG 90 10 LT478_RS09025 2109624 .. 2109661 - -12.8 -3.05384 CCCCGCGCGATCGAA CCGCCTCCCATTTCTC GGACAT GAGAAATGGGAGGCTT TTTCATGACCGGGCG 72 60 LT478_RS08995 2101504 .. 2101556 - -5.4 -3.54488 CCCGTCCAAATAATA TCCATCGA-GCTG-GGCGCATGCGCC CCC GACGCACGCGCCGCCCCGCCGCGGGA ACCTGCGGCGGGGCG 55 67 LT478_RS08990 NONE LT478_RS08985 2099949 .. 2099970 - -17.3 -5.67063 GCCATGAGAAAAAAA CGCCCCCTC CGTG GAGGGGGCG AACCTTACGCGTTGA 100 30 LT478_RS08980 2099030 .. 2099054 - -16.4 -4.65933 CAGCCGGAAAAGAAA GGCCCGCCGC GCGAT GCGGCAGGCC GGGTTCCCTACGAGC 100 33 LT478_RS08975 2097980 .. 2097996 - -4.3 -2.80821 TTCTCAAAGATACGA GCATGGG CCT CCCCTAC TTCTTCAGGTACGGC 43 22 LT478_RS08970 2096997 .. 2097011 - -5.6 -3.14211 AGGTTGGCGTAGTAA GTCAGC GAG GCTGGC TGCGGTGCCCGAGAT 50 146 LT478_RS08965 2096597 .. 2096623 - -13.7 -4.11394 AGCCGATCCGGAAAA GCGGCGACCCCG TCTT CGGGGCCGC-GC TCAACCGCCAATCGC 95 40 infC NONE rpmI NONE rplT 2094400 .. 2094428 - -21 -3.90112 CCTCTCCTAACGAAA GCGCCCCGCCGG CTTAT CCGACGGGGCGC TGTTTTTGCATAGAC 100 48 LT478_RS08935 NONE LT478_RS08930 2090615 .. 2090631 - -5 -3.35679 CTTTCCCATCGACAA CGGCCC GACGG GGGTCG CGTTCGCTCAGCATA 49 33 LT478_RS08925 2089961 .. 2090009 - -12.4 -3.27489 GCAAGCGCAAATAGA CGTCATGGACGGCGGGAAGCGAAG CAT CCCCGGTTCCCGCCG-CC-CGCCG CATTACTCCTTCTGC 76 334 LT478_RS08900 NONE LT478_RS08895 2078824 .. 2078837 - -5.2 -3.55622 CGTAAGCCCCGGAAA CGCC TCGAGG GGCG CGGGTGTTGACAATA 52 267 LT478_RS08885 NONE LT478_RS08880 2074568 .. 2074594 - -15.9 -3.02591 ACCAGGTAAACGATA CGAGGCCGGAA TCCGT TCCCGGCCTCG TTTTTTATTGTCGGC 83 398 rlmD NONE dcd 2072373 .. 2072389 - -2.9 -4.64766 GCCAGACCGGAAAAA TCGTAGA ACA TCCACGG CGAGCAGAAGCGCTG 68 107 LT478_RS08860 NONE LT478_RS08855 2070307 .. 2070318 - -7.2 -4.93296 TCAGGATGACAAAAA CGGC GTAT GCCG CTTTTGTCAGTTCTG 88 32 ndk 2069677 .. 2069719 - -17.8 -5.61881 TCCGAAAAACAAAAA GCGCGCCGTCGC-T-CGAGC GAAAG GCTCGTACGCGGCGGCGCGC TCGGAACGTGCTTTA 100 38 LT478_RS08845 NONE LT478_RS08840 NONE LT478_RS08835 NONE LT478_RS08830 2065492 .. 2065516 - -14.3 -5.58454 CTCAGACCAAAAAAA GCTGGAACCCG TAA CGGATCCCAGC CTTTCCATCATAAGG 100 74 LT478_RS08825 2064230 .. 2064249 - -7.8 -3.44229 ATGCGACGAGCAGAA CTCGGCGC AGAA ACACCGAG CTTCTCTGTTGGAAA 62 70 mreC NONE mreD 2062867 .. 2062889 - -4.8 -3.62096 GGCGATCACGGCAAA CGCCCC CTATCGCAGCC GGGGCG TGCGCGGTCCGCGGT 54 9 mrdA NONE rodA NONE LT478_RS08800 2058270 .. 2058281 - -2.2 -2.87683 AGACGCGGCCAGAGA TCCG TCAT CGAA CTCGTTTCCCTTCTT 40 62 LT478_RS08795 NONE LT478_RS08790 2055511 .. 2055523 - -3.4 -3.84451 CCTCCGAAATTTAAA CGAT GGTTT ATCG AGGGTTTGACCTGCC 54 94 LT478_RS08785 2054186 .. 2054203 - -14.1 -4.21142 ATCTGAATACAGAAA GCCCGCC GATC GGCGGGC TTTTTTTCTTGCTCG 100 98 LT478_RS08770 2053214 .. 2053232 - -3 -3.15999 TCTTCAGATAGCGAA TTATGCGC ACG GCGCCTCA TCTCCTTCCGCGCGG 43 7 LT478_RS08765 NONE LT478_RS08760 NONE LT478_RS08755 2048397 .. 2048432 - -4.7 -3.45404 CCAAAACGTAAGCAA CCCGAAGGGTATGAGC GCAAG GCTC-TACCAGTCGAG GATCTCCCAGCCCTT 52 14 LT478_RS08750 NONE LT478_RS08745 NONE LT478_RS08740 2045267 .. 2045283 - -2.2 -3.94634 GAGGAGGGCAAAGAA TGCAAC CTCCC GCCGCA GCGGGCCCCGTCAGG 54 36 LT478_RS08735 2043999 .. 2044013 - -4.2 -4.36729 ACGAAGAAGGTAAAA GACGGA GTC TACGTC TCGTCCGGCTTCTAG 68 37 LT478_RS08725 NONE LT478_RS08720 NONE LT478_RS08715 2039015 .. 2039034 - -15 -3.60098 ACTCCGGACGTGAAA GGACCCGG TTTC CCGGGTCC TTTCGTCAGTGCCGA 90 51 LT478_RS08705 NONE LT478_RS08700 2037039 .. 2037052 - -2.3 -2.77899 CCTGTTCATCAAGGA CATCC ACCG GGAAG CGTTCAACCGCGCGT 38 261 LT478_RS08690 2034641 .. 2034676 - -13.5 -4.36914 CTCTCCTCTACAAAA CTAGCGACTGCTAGT ATATTA ACTAACAATCGCTAG TTTTTCAAGGGATGA 100 261 LT478_RS08685 NONE LT478_RS08680 2033388 .. 2033436 - -11.1 -3.02263 ACACCCCGTTGAACA CGCAGATGACGCGCACG-ATGCGG CGCG CCGCGTTCATGCGCG-C-TCCGCG CTTCCCGCCGGCACC 68 10 LT478_RS08675 2032985 .. 2033007 - -18.4 -3.14931 CTCATGCGGCACGAA CCCGCGCGCC GCT AGCGCGCGGG ACGCATCACCACCGC 90 14 LT478_RS08645 2026324 .. 2026338 - -8.5 -4.35461 CGAACAGCACGAAAA GCCGC GATCG GCGGC TTCATGCAAGGTTTC 77 164 mfd NONE LT478_RS08635 2021524 .. 2021550 - -11.4 -3.04322 CTCAACGTGGGAAGA GGCGCCGCCCTC GTC GCGGGCATCGCC TTCGTCATCTGCGGC 65 286 LT478_RS08620 2019236 .. 2019282 - -10.1 -2.73483 AGCGCAGTCGAAGGA TCGCGCGCGGCGCCAACCGTGA GACT TC-CAGCTATCGCCGCACGGGA TCCTTCGACTTCGGC 61 74 LT478_RS08615 NONE LT478_RS08610 2017253 .. 2017272 - -9.3 -3.71873 GGACGGACAGGCAAA CCCTACG CGTAGC CGTAGGG TTTGCGCAGGTACAC 71 8 metK 2007266 .. 2007304 - -23.3 -2.71712 CCGCGCGCCGCAAAC GCGAAACCGCCCGCTGCG CGAT CGCAACGGGCGGTT-CGC CACAAGCTTCTACGG 100 48 priA 2003981 .. 2004004 - -8 -3.18681 GCCGAACGTCAGCAA GCCGCGGCGC GAGC GCGCTACAGC AGATCGTCGGGATCG 57 19 LT478_RS08555 1999812 .. 1999826 - -3.5 -2.96216 GGGCATGAGTATACA TACGC ACCAG GCGCA AAGATACAGCCAAAT 42 131 rpoD 1998343 .. 1998361 - -7.4 -2.91264 TTCGTTATCCATACA GCGCAGAT CCA ATCTTCGC ATGCCGCAGGTTGGC 51 200 rlmKL 1995788 .. 1995811 - -11.7 -4.30809 TAAGACCGAGCAAAA GCCCGACGC TGCAGC GCATCGGGC TGAAAATGACGAAAA 93 247 LT478_RS08540 NONE LT478_RS08535 NONE LT478_RS08530 NONE LT478_RS08525 1993824 .. 1993851 - -15.6 -3.94846 CCAGGAAAATCGAAA CCGGTTGCGCTA CGAC TCGCGCAACCGG TTTTTTATGCGGCGG 95 60 LT478_RS08515 1993473 .. 1993490 - -11.3 -4.82667 TGAGGATATGAAAAA GCCTTCC GAAA GGAAGGC TTTTGAATTCATGGT 100 37 trpS 1991649 .. 1991660 - -4.4 -4.25615 AAAAAGTCTAATAAA CCAT GTTC ATGG CTTCTCTTACCTCAT 65 6 LT478_RS08500 1991405 .. 1991429 - -12.2 -5.8187 GACGGAATAAAAAAA CAGACCAGAC TGTTC GTCTGGCCTG CCGTTAAATTCTGGC 100 37 LT478_RS08495 1990943 .. 1990960 - -14.1 -5.47218 TTGCATGCAAAAAAA GCGGCCC CTAA GGGCCGC TTTTGCTCGTTCATG 100 52 LT478_RS08485 NONE LT478_RS08480 1989128 .. 1989152 - -9.1 -3.53224 CACCGTTGCGCGAAA CGGACGGGCCG GGC CGACGCGGCCG GAGCAGCAAGCCGCG 66 49 LT478_RS08475 1986887 .. 1986899 - -3.3 -4.12188 GCACGATGTTCAAAA GCCGC GTC ACAGC TGCTCCGCCTGCCTC 59 19 LT478_RS08470 1986346 .. 1986356 - -4.6 -3.00298 GCGGTCAAGTATACA CGCG TTC CACG TCCTCCGCGCGCTTT 46 95 serC 1985163 .. 1985191 - -22.5 -2.71364 CCATCGCCCCAATGA GAAGCGCCCGGCC GTC GACCGGGCGCTTC GTCGATCGCAGGCGG 100 51 LT478_RS08455 NONE LT478_RS08450 NONE scpB 1981623 .. 1981644 - -13.7 -3.11272 GACGACGACGCAAGA CGCACGGCGC TCG GCGCCG-GCG GCGGCGGTGCCCACC 76 116 LT478_RS08440 NONE LT478_RS08435 NONE aroA NONE cmk NONE LT478_RS08420 NONE ispH NONE LT478_RS08410 NONE der NONE plsY NONE LT478_RS08395 1970826 .. 1970858 - -14.9 -5.00884 AGCGGGCGTAAAAAA GCCTCCCTTGGGT TGGGGGG ACCCGAGGGAGGC TATGCAGTGCGCACA 100 273 rpe NONE LT478_RS08375 NONE LT478_RS08370 NONE LT478_RS08365 1964345 .. 1964362 - -10.5 -2.52464 CTTTGTTCGAACGGA GCGCCGC CGCT GCGACGC TCCTTAGCATTATAC 60 35 LT478_RS08360 1963539 .. 1963554 - -11.8 -4.23758 AGCCGACATTGAAAA GCCCGC TCGC GCGGGC TTTTTGTCGTTCTCT 89 74 LT478_RS08350 NONE LT478_RS08345 NONE LT478_RS08340 NONE rsmD NONE coaD 1957677 .. 1957693 - -2.2 -3.59979 CGCGCCGACGCGAAA CCGTGA CCTGC TAACGG GCAGTTTCTACGCGT 49 33 LT478_RS08325 1957005 .. 1957056 - -4.2 -3.05384 CTCCGCCGGAGCGAA GAGCTCGTGGGGC-ACCTGGATGCG GAG CGCGTCCATTTAGCGCCCCGAGGCC AAAGAATTGGCGTTC 46 10 LT478_RS08320 1956443 .. 1956470 - -18.5 -5.43414 AGGAGAGAGAAAAAA GAACGCCCGCC GTGAAG GGCGGGCGTTC GGTCGTGCGAAGCTA 100 38 LT478_RS08315 NONE LT478_RS08310 NONE LT478_RS08305 1954340 .. 1954362 - -9.8 -4.56597 TCTTCGCCCGAAAAA CACGCCTCAG CAT CTGGAGCGTG TTTTCGGAGCGAAGA 89 70 LT478_RS08300 1952825 .. 1952836 - -7.2 -3.53012 CGGGCTTCGCGTAAA CGCG GCGC CGCG GTTGCCGCTCGTTCT 58 50 LT478_RS08295 1950784 .. 1950796 - -3.3 -3.63251 AGTACCAAACGAGAA CCCGC GCC GCAAG CCCCGATCACCCGCA 51 63 rpmF 1950428 .. 1950470 - -17.7 -4.72029 CGGAATGCAAGAAAA GCCTCCCGGCGCATCGCAC GCGAA GCGCGATGTGCGAGGAGGC TTGTCAATGCGCGGC 100 69 plsX NONE rnc NONE smc 1944630 .. 1944642 - -10.5 -3.62096 CCGCACGAGCCGAAA CGCCC AGC GGGCG TTTCGTGCGAGCTCA 73 94 LT478_RS08265 NONE LT478_RS08260 1943110 .. 1943129 - -6.3 -3.38224 AGTGTATCCCAAATA GGGCCGC GCGTCA GCGGCGC GGATCCTCCTCCTGC 52 16 ftsY NONE LT478_RS08250 1941130 .. 1941152 - -9.1 -3.53811 CGCATGGCGCCGAAA GGCGTCTCC CGCTC GGATACGCC GCCCCTTAGAAATAC 66 31 LT478_RS08245 1939816 .. 1939849 - -11.9 -3.28785 TTTCAAAACAGGGAA CAATAAAGCATACCG TAAT CGGAATACTTTATTG TCATCGAGCAAACCA 72 95 ffh NONE LT478_RS08235 1937561 .. 1937573 - -6.2 -3.28712 CGTTTCGGGCGACAA CGCG GGCGG CGCG ACGGCGATGCGAACG 52 103 rpsP NONE LT478_RS08225 NONE LT478_RS08220 NONE trmD NONE lepB 1934892 .. 1934908 - -10.1 -3.54741 GATCACCGGGCGAAA CCCTCGC GAC GCGAGAG GCGGGAGGCTATCCC 70 34 lepB NONE LT478_RS08200 NONE glyS NONE LT478_RS08190 NONE ppdK 1927350 .. 1927376 - -20.9 -3.66356 ACGCCGAACGCGAAA GGGCCCGCAGC GCGAT GCTGCGGGCCC TTCGATCATGCGAGG 100 54 LT478_RS08180 1926468 .. 1926490 - -6.2 -2.91695 TCTAGCGCGAAATGA CGGTCGGG CGCATTC CCCGAACG GGGTATTCCGCAGCG 48 93 LT478_RS08175 NONE LT478_RS08170 NONE LT478_RS08165 NONE LT478_RS08160 NONE LT478_RS08155 NONE LT478_RS08150 NONE LT478_RS08145 NONE LT478_RS08140 NONE LT478_RS08135 NONE LT478_RS08130 1914354 .. 1914395 - -5.7 -2.63435 CCAACCAGCGAGAAT GCCGCCGCGCACGACGCAA CCGC CTTCATCCTACGCATCGGC GCGCTCCGCCTCGGC 46 14 LT478_RS08125 1913688 .. 1913714 - -7.8 -3.13371 CACCTGACGAAGAGA CGGCCGCCGCGA ATT CCTGAGCGGCCG CGGGCGCGAATAGGC 57 184 LT478_RS08105 NONE LT478_RS08100 NONE LT478_RS08095 NONE LT478_RS08090 1905363 .. 1905400 - -17.8 -4.17762 TATTCCCTAAAAGAA GGCCGCGCTTCCCCCT GTCCGA AAGGAGAAGCGCGACC GGGATTCCATGCTAC 100 37 mtnA NONE LT478_RS08065 1897922 .. 1897932 - -2.4 -3.19048 GCGCAACGAAGAAAT GTCC TTA GGCC GAGGGAACCTAGTAA 43 34 LT478_RS08060 NONE LT478_RS08055 1896736 .. 1896754 - -5.3 -2.63913 CACGATTGGATAGTA TACCGTC AACGG AACGGTA CTGCAAGGAAAAACC 46 128 rplS 1896256 .. 1896291 - -25.6 -5.00616 CGCCCCTGTAAAAAA GAAACCCCCGCCGTCC GGAA GGACGACGGGGGTTTC TGCAAATCTGAAGCG 100 51 LT478_RS08045 1895298 .. 1895333 - -2.5 -4.2349 GCCGCAGATGGAAAA GCCGTCCAGCTTGCACC CGAA GGCGC--GTCGAACGGC TCGCAAGCGTGGAAA 60 78 LT478_RS08040 NONE LT478_RS08035 NONE dprA NONE LT478_RS08025 NONE LT478_RS08020 1891565 .. 1891581 - -3.6 -3.05384 GCGTTTCTTACCGAA CGCGCT CGCTC ATCGCG AACAGGGCCTCCGGA 43 1 trmFO NONE LT478_RS08010 1889033 .. 1889048 - -3.2 -3.15544 GGCGACCGTCAGGAA GCGG TCACAGCT CCGC AACCGGCCGGGAACC 45 103 LT478_RS08005 1888345 .. 1888375 - -3 -2.92026 CATCTGAACATTATA GGCTCGAACTCGAC GGG GGCAAGGGCGGGCC GACGTTCTCCATAGC 40 73 LT478_RS08000 NONE LT478_RS07995 1886957 .. 1886985 - -10.1 -3.87075 ACGATCCCTGAGAAA GGCTGCCGGGCTC ATC GCGCACGGCACCC CCGGAGTCGTCGGGG 78 49 LT478_RS07990 1885811 .. 1885843 - -5.5 -3.39521 CTTACGAAAATGCAA GGCAGCACGGCCTG AACCCG CAGGCCGT-CATCC TGATCGGAGGCCGCA 52 125 LT478_RS07985 NONE LT478_RS07980 1882577 .. 1882634 - -39.7 -3.34398 CCCCCCCCCGAAACA CGTTGTCGCCCGAAAGCCGCTGTTTTCA CGC TGAAAAC-GCGGCTTTCGGGCGACAACG AGCATGCGGAGGCGG 100 82 LT478_RS07970 1881057 .. 1881068 - -7.2 -4.75174 GACTCAAGGGAAAAA CGCG CGTG CGCG TTCCGTTGGATTCTG 85 451 uvrA 1877843 .. 1877865 - -3.4 -3.53012 TCCGCCGTCTGCAAA GCGGG-CAT TGTCGC ACGTCCCGC CGACGCGGTAAAGGG 49 104 LT478_RS07955 1876197 .. 1876229 - -2.1 -3.02263 AGATGTTTTGCAAGA GTTTTGC-C-CCAGT TTTGG ACAGGCGAGCAAAAC ACCATGTCAAGGGGT 41 55 LT478_RS07950 NONE LT478_RS07945 1873877 .. 1873896 - -4.2 -3.63837 AGAATCTCGGAAGAA GCTCGCCT GGCT ACACGAGC CGCTCGTAAGCGATG 54 16 LT478_RS07940 NONE LT478_RS07935 1871418 .. 1871430 - -6.2 -3.02144 GCAGGCCGCCGAACA GCGC GACAA GCGC CTCGACTACGACCCC 48 487 LT478_RS07925 1869353 .. 1869367 - -3.4 -3.30441 CATCATGCCCCAGAA CGGGCG GCG CGCCTA TCGTGCAGACGCATG 47 106 LT478_RS07920 1868912 .. 1868953 - -16.5 -4.07568 CCGCCCTCCTCAAAA TGCGCAACCGCCCACGGCA CGGA TGCCGCGGGCGGTTGCTGG GCGCGAGGGAGGGAG 100 75 LT478_RS07915 1867159 .. 1867170 - -7.2 -2.71364 GGAGGCCTTCAAGGA GCGC TTCG GCGC CACCCCGCAGGAGTT 48 183 LT478_RS07905 NONE LT478_RS07900 NONE LT478_RS07895 1862897 .. 1862924 - -17.8 -3.90048 TGCCGCCGAAAAAGA GAACGGCTCCCC CGAA AGGGAGCCGTTC GTTCGGCGCCTCGTC 100 59 LT478_RS07890 1860955 .. 1860969 - -3.4 -2.75183 AGGCCCAGGGAATCA CGCAGC ATA GCCGCC CTCCTTTCCGATGCG 41 8 LT478_RS07885 1859212 .. 1859224 - -3.3 -3.90588 CATCGCCGAAGGAAA GAAGC GAG GCGTC AGGAAGCCAGCGACC 56 24 murB 1858094 .. 1858109 - -6.2 -4.15044 TCGTGCGCGAACAAA TGTTTC ACGT GAAACA TTTGTTCCTTTGTCG 68 60 cydD NONE cydC 1854152 .. 1854169 - -4.7 -4.27117 TTTCGAGAAGAGAAA CGGGCCG AACA CGTCCCA AACGGGCAATCCGAC 65 241 LT478_RS07860 1852747 .. 1852772 - -13.2 -2.87564 CTATTGTCTCATACA CCGCGTCCGC GGGGAA GCGGGCGCGG CGGCAGGTTGCAGGA 75 57 ettA 1850498 .. 1850525 - -9.2 -3.14132 CTGCTCGTTCATGAA CGTATTCGGCATC GTC GATGCCG-ATTCG CTTGTGTGGGACGAC 60 520 thrH 1847830 .. 1847852 - -6.8 -4.08945 AGCACCGCGCGAAAA CGCCGATGCC GCA GGCGACAGCG AACGCAGTTAAGCCA 68 33 LT478_RS07825 1845555 .. 1845601 - -13.2 -4.06419 CGGCGGCATAAAGAA GCCTCCCATCTCTCGAAC TTTACTTTCTT GTCCAAGAAATGGGAGGC AGTTCAAAGCCCGCC 95 76 LT478_RS07815 1844099 .. 1844121 - -7.6 -3.40558 GAGACAGCCGAAAGA GCGAGGTTGG GCG CGAACCGCGC GACAAAAGGAAAGGG 59 98 LT478_RS07810 NONE brnQ 1841449 .. 1841471 - -4.1 -3.43042 GGTTGTAGGAAAAAC CGCCACGAAT CCGG AGTCG-GGCG CTCACGCCCGTCGCG 49 27 LT478_RS07790 1836809 .. 1836849 - -27.8 -3.02511 CCGATCGCTCTAAGA CGCGGAACGGGCCCGGAAC AACC GTTCCGGGCCCGTTCCG-G AGCCCTGCAGGGAAA 100 75 LT478_RS07785 NONE LT478_RS07780 NONE LT478_RS07775 1834583 .. 1834599 - -5.1 -3.37975 ATGGATCACCGACAA CGACAAG AAC CTCATCG CGCACCTCCCAGCTT 49 20 LT478_RS07770 NONE LT478_RS07765 1832895 .. 1832905 - -5.4 -3.39618 CGCAACGCCAAAAAG GAAG CCC CTTC GCCGCAGCAGCACTA 52 43 LT478_RS07760 1831504 .. 1831530 - -25.2 -3.36823 CGTCCGAAAACGGAA GCGGCCCCGACG TGT CGTCGGGGCCGC AGGAAGAGACCTTGT 100 67 LT478_RS07750 NONE LT478_RS07745 1824557 .. 1824590 - -12.3 -3.81 ATTATGCCACAAGAA GGCAAGGCCCGGGGG CGTG CCTGCGGGCCTTGAC AAGGAAGCCGCAGGC 85 42 LT478_RS07740 1822603 .. 1822634 - -12.3 -3.09823 TGCCCGAAAACGATA GCCCGCAACGGCGG CGGAT CGGCCGTT-CGGGC GCGAAGCGTAGGGCG 72 110 LT478_RS07735 1821211 .. 1821237 - -2.1 -2.78384 TGTTCGTTTAGTATA GCACGTCCAAC GCGGA GCCGGAGGAGC CGCTACCGCTTTCAC 39 37 LT478_RS07730 NONE LT478_RS07725 1819138 .. 1819149 - -5.8 -3.54424 GCGCAGCGCCTGAAA CTCG CCAG CGAG ATGGGCCGGGCGCAG 55 381 LT478_RS07715 1814990 .. 1815022 - -8.4 -3.57144 CTGTCCATGGTGAAA GGCAAG-GCGTAGGC GCGC GCCCTCACGCTTGCC GGTAGCGGCTCAAGA 64 15 LT478_RS07705 1812356 .. 1812376 - -4.7 -4.15788 AATGCCGCGAAGAAA CCGATCGG CGCGCC CCG-TCGG CAAAGCGTTCGCTCG 65 74 LT478_RS07700 1810241 .. 1810262 - -2.3 -3.14126 TGAGAAATTTTAACA GATGAAGCCA ACC TGTCTTC-TC GAAACCTTGAGCCGT 43 83 LT478_RS07695 NONE LT478_RS07690 NONE LT478_RS07685 1807271 .. 1807285 - -3.4 -4.2717 AGCAGCCGATGAAAA CCATGC GCC GCGCGG GTTTCGTGGACATGG 64 173 LT478_RS07675 1804750 .. 1804760 - -3.2 -3.17075 CTCGCTCCAACGGAA TCGG CTC CCAA CGCGTTCCGCCTAAA 45 36 LT478_RS07670 1803685 .. 1803695 - -3.2 -4.65168 ACGAGACTTGAAAAA GCTC GAC AAGC GTCACGTCGACGATG 72 375 LT478_RS07660 1801166 .. 1801193 - -13.5 -2.62184 TGCTTTTCCATAGGA GCCCCTGAATC AAGCGA GATCCAGGGGC TCCTTTTCCGCCATA 72 127 LT478_RS07645 NONE LT478_RS07640 1797989 .. 1798023 - -22.9 -2.50935 ACGCGATCTAGCAAC GCCCGCGCGCGCCTT TCCGC AAGGGGCGCGCGGGC CGACAGGACGGCCGC 100 42 LT478_RS07575 1786301 .. 1786314 - -3.1 -3.04398 CGGCTGCGGCAAAAG CGCAA AGCC TTACG ACCAGTGTGAACGCG 43 235 LT478_RS07570 1785917 .. 1785948 - -14.5 -3.06696 CGTCGGGGGAAGATA CCGTGAAGTCGGC TGGACG GCCGACTTCACGC ACAAGAGGAAGAAGA 80 20 LT478_RS07565 NONE LT478_RS07560 1783565 .. 1783591 - -13.6 -3.54424 GTTGAGCCGGCGAAA GCTTCGACGCCG GAG CGGCGACGGAGC CGACATCCCTCGGCA 86 372 LT478_RS07550 1782085 .. 1782103 - -4.5 -3.60098 ATGTTTCACGTGAAA CATCCGC GACAA ACGGACG AACGGCCTTGTCTTT 54 50 LT478_RS07540 1779311 .. 1779365 - -4.4 -2.78384 CCGCGCTCGAGGACA GCCGCTA-CTTCTGCGTTGCCGT-GCG CACG CGCGAGGACAACG-AGAAGCTGGTGGC GGCCCTGCGCGAGAT 42 109 dinB 1776457 .. 1776469 - -3.3 -3.67597 GCGCGGACGCAAGAA GTCGT TGC ACGCC CTGGTGGACCACATG 51 384 ileS NONE lspA NONE LT478_RS07510 1770775 .. 1770788 - -3.7 -3.14132 CCTGCCGTTCATCAA GCGGG TGTT CTCGC ACGTGGATGCCAGGA 45 248 hemH NONE coaBC 1767819 .. 1767847 - -17.5 -3.01791 AGGGCCGCCGCAAGA TGCAGGGCGCC GGTCCAA GGCGCCCTGCA TCCGTTCCTACGCCA 87 33 LT478_RS07485 NONE LT478_RS07480 1763874 .. 1763902 - -14.6 -5.31275 GCTGAGCATAAAAAA GCAGGCCACCGG TTTCT CCGATGACCTGC TCTAAGTTGCTGGTC 100 36 LT478_RS07475 1762208 .. 1762229 - -14.5 -5.47218 CTCGACGCAAAAAAA GGCTGGAGA TCGA TCTCCAGCC TTTTCGTTCATCCGA 100 53 LT478_RS07470 1761597 .. 1761636 - -17.8 -4.57569 CGATGCCGTGAAAAA CGCGAAGCGGCCGGGAAC GTTC GATCCCGGCCGCTTCGTC CCGAAAGAGGACCGC 100 73 LT478_RS07450 1757120 .. 1757133 - -8.1 -2.71144 GACGCCTGGCAAGGA TCGGG TCAT CCCGA TCCTTGCCAGTATAC 53 71 LT478_RS07445 1755248 .. 1755265 - -10.5 -4.90079 ACTTGAACAATAAAA GCGAGCG ATAT CGCCCGC CAGGCCACTCTACCA 100 240 LT478_RS07440 NONE LT478_RS07435 NONE nuoB NONE LT478_RS07425 NONE LT478_RS07420 NONE LT478_RS07415 1749694 .. 1749728 - -20.1 -4.05788 GGGCCGGAAACGAAA GAAGACCCGGGATCC GTCAA GGTTCCCGGGTCTTC GCAGTTCCGACGGAA 100 47 LT478_RS07410 1748414 .. 1748450 - -12.3 -2.70936 CGAGCAAGGACAGCA GCACGC-CGCCGACCGC GCCGA GCGCTCGGCGCGCG-GC TCCTCCTGCGGGATT 69 313 LT478_RS07405 1746416 .. 1746426 - -3.2 -2.62184 GTCTGGCTGATAGTA CACC TTG GATG CTCACCTCTCAATTG 40 34 LT478_RS07400 NONE LT478_RS07395 NONE LT478_RS07390 NONE LT478_RS07385 1742742 .. 1742759 - -2.5 -4.17089 GTCAAACGTCCAAAA CCGAGCC GAAC GGCGCGC GTTTTGCGCATGTTG 60 90 LT478_RS07380 NONE LT478_RS07375 NONE LT478_RS07370 NONE LT478_RS07365 NONE gluQRS 1737478 .. 1737507 - -5.6 -4.65078 ATAGCCTCAAGAAAA TGTCATGGGTGC CGTTTT GCGCCCACGGCA GCGGAGTCGCTGCGG 76 60 LT478_RS07355 NONE LT478_RS07350 NONE LT478_RS07345 NONE LT478_RS07340 NONE LT478_RS07335 1731517 .. 1731530 - -5.9 -3.53012 CTCCCCCTCCCGAAA CGGAC GACA GCCCG AACCGCGCGCTTCCC 55 49 LT478_RS07330 1729728 .. 1729739 - -7.2 -2.78762 AGATGAGCAAGATGA CCGG CGTG CCGG CGTTCGCGCAAACCT 49 220 LT478_RS07310 NONE LT478_RS07305 NONE LT478_RS07300 1725518 .. 1725533 - -7.5 -4.15044 GCTCCGGCGAAGAAA CCCGC GCGCAA GCGGG CGTCGGCCTAGAGGC 71 73 nrfB 1722194 .. 1722218 - -7 -3.21099 GGCGTGCAGGAGGAA GCACCGGCCC TCGAC GTGCCCGTGC TCGTGCTGCGCGACG 54 234 LT478_RS07270 1718372 .. 1718403 - -13.8 -3.95219 TCGAAACCGCATAAA GCGCTGCAGGTT ATGCACGG AACCCGCAGCGC TTTGCTTTTTGCTTC 91 128 lexA 1713084 .. 1713119 - -29.8 -3.19246 GTAACTCTAAGGTAA GCGAGCCGCCCCGGGC ATCG ACCCGGGGCGGCTCGC TTTGTCGCAGGGTAG 100 207 LT478_RS07130 NONE LT478_RS07125 1685698 .. 1685714 - -5.1 -2.73441 CAGTATGTCGTAAAG CGTTTAC GTT GTCAACG GTACTCGAGACCAAA 43 94 LT478_RS07120 1685089 .. 1685140 - -27.6 -3.05463 ATTGCTCGGATGCAA GCACCCATGCGAAAGCAGCCATCT GACA AGATGGCTGCTTTCGCATGGGCAT GAATCTGTTATAAGC 100 306 LT478_RS07115 1684035 .. 1684073 - -8.7 -3.05844 CGCTTGAGGGCAACA CGTGC-GGTCGGCGCGCA ACTT CGTGCGCCGACCAGCTGG TGAAAGGGCTGCGCG 57 48 LT478_RS06955 1653409 .. 1653436 - -19.2 -4.28488 ACTGAAACATAGAAA CGAGGGCGCATC GGCT GACGCGCCCTCG CTCGATCAGAATTCT 100 44 selD 1631709 .. 1631736 - -4.7 -3.59979 GTGGCGCAGGGCAAA GGCGCGCCCTAC TTCCT GACGGGCG-GCC TGTGCGACAACGGGT 55 463 selA NONE selB 1622467 .. 1622495 - -6.6 -3.86015 CATCTCCGCCAGAAA CG-CCAGCGCCCC GATC GGGGCGCTTTTCG TATTCCCGGATAGAA 65 55 LT478_RS06690 1596881 .. 1596893 - -3.4 -3.78022 TTCATACGTACGAAA GCTT GACAA AAGC GTGCATTAACGAAGC 54 68 LT478_RS06685 NONE yfcE 1594561 .. 1594575 - -7 -2.71144 GAGCTGGCCGAAGCA TGCCGC AAG GCGGCG TTGAGCGGTTTGATC 48 345 LT478_RS06660 1587983 .. 1588024 - -12.3 -2.75481 CTTCAAGTTCAACTA GCGTGCATGCGGAACGG-GA AGC TCGCCGTTCCGCATGCGTCC TGCGCCGCGCCCGTT 69 113 pta 1584462 .. 1584499 - -27.9 -3.61764 GCACGAAGCTGTAAA CGACGAGGCCCCCGCAGT TCA AC-GCGGGGGCCTCGTCG TTTGGCAAGCAGGCG 100 50 LT478_RS06610 1577915 .. 1577930 - -11.8 -3.53091 AGCGCTTGTCGGAAA GGGGCC TGCA GGCCCC TTTCCGTTCGGTTTG 74 90 LT478_RS06600 1575571 .. 1575603 - -22.1 -4.55697 AGGTGGAGAAACAAA GCGCCCCGCATCG TCGAAAG CGATGCGGGGCGC GAATGCTCGAATGCG 100 58 LT478_RS06595 NONE LT478_RS06590 NONE LT478_RS06585 1571674 .. 1571691 - -2.7 -2.9856 CAAACTCGAAATAAC CATGATGG GTT CC-TCACG TTCGTTCTTCTTATC 41 132 LT478_RS06580 NONE LT478_RS06575 1570471 .. 1570522 - -40.5 -3.53012 GCGGCGCGCGCGAAA GGTGCGGCCTCTGGTGCATCGCG AAGCCG CGCGATGCACCAGAGGCCGCACC GGATCATTCCTCGCC 100 29 LT478_RS06535 1564133 .. 1564155 - -13.5 -3.68244 ACCATGAATTCGAAA GAGCCTTCG ATCTG CGAAGGCTC TTTTTTGTTGCTCCG 88 357 LT478_RS06525 1563766 .. 1563796 - -7.5 -4.26344 ACACCGTCATGAAAA GGCCGGTCAAAAC TTTTG ATAATGACCGGCC TGTTAGCGACGATGG 71 38 LT478_RS06520 1563643 .. 1563670 - -6.9 -3.60792 TTTTCAATTCTCAAA CCGTCCGCCCC GCAAGG GGAGCGAATGG AGGCGACGCCCGGAT 60 22 LT478_RS06515 1563508 .. 1563529 - -17.3 -5.1675 CGAGGCATGAAAAAA GCCCGTCGG TTTG CCGACGGGC TTGTACGATCATGGA 100 37 LT478_RS06470 1555484 .. 1555503 - -9.2 -3.36327 GCACGGCATGGAGAA CCTGCCGC CGGC GCTGCAGG ACTTCATCAAGCTGC 64 208 LT478_RS06400 1538270 .. 1538283 - -3.7 -4.09739 TGAAGCGCTGCAAAA GCGCG AGTT CGTGC TGAACGGCGACAGCG 62 485 gdhA 1532109 .. 1532141 - -16.3 -4.62069 GTTGCATGGCAAAAA GAACGGGCCCCGTCC TGA GGACGAGACCCGTTT CCGCGCGCGATGCTT 100 56 LT478_RS06350 1524263 .. 1524304 - -5.8 -3.85698 GGCGTGCGCTACAAA GCCG-CTGTGAACGTGGGCG TGGC CGCC-ACGTTCGCCGACCGC GCCACCGCCACCTGC 62 201 LT478_RS06300 1512406 .. 1512425 - -4.9 -4.386 GAATCCGGGAGAAAA CTCCGGT GAAGGG ACCGGCG GATCGAACGCCAAGC 70 216 LT478_RS06250 1497884 .. 1497905 - -17.3 -4.4874 TGGAAAAAGCGAAAA CCCCCGGAC GCGA GTCCGGGGG TTTCAAGGACGAAAG 100 52 LT478_RS06240 1495077 .. 1495103 - -14.4 -3.05384 CGCCGTCGGAGCGAA CGCAACCAGGCG AAA CCCCTGGTCGCG ACTTCTCCGTTTCGC 80 153 LT478_RS06200 1483537 .. 1483567 - -15.5 -3.24188 GGAGAGCATGACGAA CGC-GAAGCGCCCC GATC GGGGCGCTTCTGCA TGCAGAGCCTTCTAG 85 37 LT478_RS06185 NONE LT478_RS06180 NONE LT478_RS06175 NONE LT478_RS06170 NONE LT478_RS06165 NONE LT478_RS06160 NONE LT478_RS06155 1473561 .. 1473571 - -4.6 -3.65812 TGTTCTCGAACATAA CGAC GGT GCCG CTCGAGGGCGTGCGC 55 192 LT478_RS06135 1468250 .. 1468274 - -16.5 -5.40072 CCCGGCGCAAAAAAA GAACCGCAGCA ATC CGCTGCGGTTC TTTTGGCGGTCGGAG 100 43 fadK 1464351 .. 1464372 - -18.7 -3.32844 CTCTGCATGCGAGAA GGCCGGGGC GCTT GCCCCGGCC TTCTTCGGATCGTCT 95 58 LT478_RS06085 1456279 .. 1456306 - -17 -4.39877 GCAACAAGCAAGAAA GAACGCCCCGGC TTCG GCCGGGGCGTTT TGCGTGTCGTCCCGA 100 82 LT478_RS06070 1451752 .. 1451798 - -9.3 -2.73364 TGCGGAGCCGAAGGA GCTCGTGCGGCGCTAGCCGCGA GTCT TCCC-GCTAGCGCCGCTCAGGA TGGCAGGGTGCGAAT 57 44 LT478_RS06020 1439580 .. 1439605 - -20.5 -3.85817 ACGGCTTCGCACAAA GAAGGGGCCCG ACGT CGGGCCCCTTC TTTCACGTGCGGGAA 100 56 LT478_RS05975 1427075 .. 1427085 - -8.2 -3.53761 CAAGCGCGCCGGAAA CCCG TGG CGGG AGGGGTGCAGGGGTC 62 158 LT478_RS05970 NONE LT478_RS05965 NONE LT478_RS05960 1424489 .. 1424513 - -12.7 -2.8805 AGGAGGTCGGAGACA CCGCCGCGGCG CTC CGCCGGGGCCG CAGCCGCAAGCGCTA 70 156 LT478_RS05955 NONE LT478_RS05950 NONE LT478_RS05945 1421857 .. 1421886 - -7.7 -3.82603 AACCGTGAAACAGAA GGGCTCGAGCGCG TTCG CGCCATCGAGCAC GAGCCTGACGCAGCC 67 256 LT478_RS05860 1403969 .. 1404000 - -4.2 -5.40072 GTTCGGTGAAAAAAA TGGGGCAGTTTGGC TCTC ACCATCCCGCCCCC AAAACCCTAGGGTTT 90 54 LT478_RS05855 1403107 .. 1403143 - -3.7 -3.53343 AACCCTTCTGGGAAA TCGGCGCATTCTAACCA TGG TGGTTAGAATGGTTGGA GTATGGGTAGAATCG 49 145 LT478_RS05740 1375222 .. 1375261 - -4.9 -3.07522 AGAGGGGTGAAGATA GGTCGAACCGCTCCTCGC GCTCG GCGGGAAGCGGTTCT-CG GGTTCGTTCGCGTGA 46 198 LT478_RS05735 1374239 .. 1374257 - -17.4 -5.18371 TTCCATAAAAGAAAA GCGCGCCC ATC GGGCGCGC TGAATGGCGGGGAGA 100 51 LT478_RS05730 NONE LT478_RS05725 1373231 .. 1373243 - -6.9 -3.37487 GCAGATGCTCAAAGA CGGGC CCT ACCCG TATCCGGTGAAGCGG 55 310 LT478_RS05715 1371303 .. 1371336 - -20.9 -2.52464 GCGGCTGTGAAGGGA GCGCCGGCGCGAGCG GCTG CGCATGCGCCGGCGC TCCGTGCTGGCGCCT 95 40 msrA 1362565 .. 1362606 - -6.6 -2.72344 GCTCATCTCCAAGCA CTACGG-CGCGGGCG-ACGCC GAC GGCGTGCGCC-GCTTCCGCAA CACGAACTACCTGAT 48 448 LT478_RS05670 1360616 .. 1360638 - -10.5 -4.07885 CATGGTGTTCGAAAA CGGCCAGGT GAAGA ACCAGGCCG TGGGCGTGCAGCCCA 79 152 LT478_RS05660 1359081 .. 1359108 - -3.2 -3.28712 CTGTGCGCCGGACAA CTGCGCGGGAAG AGGG CCACATGCGCAG GCCGTTCGTGCGAAC 47 77 LT478_RS05645 1354747 .. 1354769 - -3.2 -3.38786 CATATGGAAGATCAA CATGTTCGCC TTC GGCGGCCTTG AGACGGCGTTTTTCT 47 318 LT478_RS05625 1351443 .. 1351489 - -19.5 -2.73364 CGCGGAGTCGAAGGA TCCCATGCGGCGACAGCGG AAAGCGCCA CGGCTGGCGCCGCATGGGA TCCTTCGCGTCCCCG 88 144 LT478_RS05545 1334482 .. 1334537 - -6.9 -3.35679 GGGCGTCAGCCAGAA GC-GCATCTCCGACCTGGAGAACGGCA GCAT CGACGTCATGCAGGT-GGAGACGCTGC GGCGCTACATCACCA 55 337 LT478_RS05500 NONE LT478_RS05495 1324501 .. 1324533 - -4.2 -3.14132 GCGCGCTTCGACCAA TGCGGGAAGCGAAGGC TGC GCATCCG-TTCCC-CA TGCACGCTTTTGTCA 48 126 sstT 1322929 .. 1322977 - -23.4 -3.39449 GTCGACCAATAGCAA CGCGTGCAAGAAGAAGGGCGGCC CTGG AGCCGCCCTTCTTCTTGCA-GAG GAACCGTTCCCCTTA 100 38 LT478_RS05470 NONE LT478_RS05465 1319851 .. 1319871 - -11.9 -5.0925 GGGGAAAATGAAAAA GGCCAGACA TGA TGTCTGACC TTTAGAATTCAAATG 100 39 LT478_RS05460 NONE LT478_RS05455 1317245 .. 1317271 - -16.6 -2.70932 GGGGGGGGCGAAGGA GCCCCCGCAG GTCGAGT CTGCGGGGGC TCCGCGATGAAGCGG 84 49 LT478_RS05435 NONE LT478_RS05430 1311809 .. 1311831 - -13.4 -3.90112 GGCGGCCGAAGTAAA GCACGAGCTG GAG CAGCGCGTGC ACAACGTGGACGCCT 86 133 LT478_RS05420 1310348 .. 1310378 - -5.3 -2.83403 CTTTGCGCACGAAAT GAGCGGAAGGC GTTATTTGG GCCGCCCGCCC GCTACGGCGATGCTC 46 7 LT478_RS05415 1308230 .. 1308248 - -17.4 -3.33696 TTTCGTTCGAAGGAA GGCCGCCC GAT GGGCGGCC TTTTTTATACGTTGT 93 30 LT478_RS05405 1305757 .. 1305788 - -12.2 -2.78384 GGGGGGGGGATGAGA CAGGGGGACGGGGC TAAT GCCTCATTCCCCTG TCGATACGGATGCGG 69 61 LT478_RS05380 1299725 .. 1299736 - -2.2 -4.07568 TCCTGCGTCCGAAAA CAGA GCTG TCCG TCATCGCCTTGTGAC 57 152 LT478_RS05375 1299281 .. 1299303 - -12.7 -5.86061 CGGCATGAAAAAAAA CCGCCCGCA GCGAG TGCGGACGG TCGATGGCGCAGGTG 100 55 ligD 1296356 .. 1296382 - -4.9 -3.65351 CGAGCTGGATCGAAA CGCCCGTCGAG GTGCG CGCGCTGGGCG GCGCGCTGTTCTGCG 55 137 LT478_RS05355 1295192 .. 1295219 - -7.8 -3.50447 TGAAGCCGTACAGAA GAGCCT-CTATCG AAG CGATAGCAGGTTC GGGCGCTTTCTCCAA 60 375 LT478_RS05335 NONE ybaK 1291339 .. 1291361 - -11.9 -3.06796 TCCGATCCTACGCAA CGGGCTCGC ATCGA GCGGGCCCG TTTTTCGTCGCGAAT 68 66 ssrA 1288900 .. 1288921 - -17.3 -3.8698 CAATGCAAACGGAAA GGGGACGCC ATCA GGCGTCCCC CAACCTATACACAAG 100 85 LT478_RS05315 1287854 .. 1287866 - -3.3 -3.2614 TATTCCCGATAGCAA CCCCG CAT CAAGG ACGGGACGGGTGCTG 45 481 LT478_RS05310 NONE LT478_RS05305 NONE LT478_RS05300 NONE LT478_RS05295 NONE LT478_RS05290 1283997 .. 1284021 - -10.8 -2.72344 CCCCATTCCCAACCA GCTTCCGCCGA CGAC TCGGCG-AAGC ATCCCATTCGGAACG 61 94 LT478_RS05285 NONE LT478_RS05280 1281669 .. 1281691 - -14.9 -3.87815 CGGGAGCTTGAGAAA GGGAGCAGC TTGAC GCTGCTCCC TTATCTTTTCGGCTA 93 38 LT478_RS05275 NONE LT478_RS05270 NONE LT478_RS05265 1279608 .. 1279634 - -13.7 -4.06904 GCATTTAATTATAAA GCCCGCCGCTC TTATG AAACGGCGGGC TAATCAGCTGCTAAT 95 36 LT478_RS05260 1277787 .. 1277797 - -8.2 -2.8474 CGCCATCTACAAGGA CGGC ATC GCCG TGGCGGCCGAGCTCA 55 77 LT478_RS05235 1272077 .. 1272125 - -7.5 -3.65046 CTGGTACGGGAAGAA GCTCGGGCT-CGACGAGC-GCGCCT ACG AGGCGCTGC-CGTCGCAGACCGT-C GTCGTGGTGCGCGAC 63 259 LT478_RS05205 1267422 .. 1267450 - -2.9 -3.21924 GCATCTTCGAGAAGA CGGGCGCGGGG ACGGGAG CCACGGGGCCG TGCATCGGGTCGATC 45 361 LT478_RS05190 1261969 .. 1261997 - -15.9 -2.55606 GCACATAGGATGAAG GCGCGCCTGGCCG GGC CGGCCGAGCGCAC GGTTCGCGCTCGGCC 78 41 LT478_RS05080 NONE LT478_RS05075 1232759 .. 1232776 - -5.5 -3.47751 TCCAACAACCGACAA GTCGAGG CCAT CGTCGAC GAGATCGAGGATGCG 55 342 LT478_RS05015 1220615 .. 1220672 - -17.8 -2.96152 ATACCAACTTATAGA GCCTTCGTG--CCCGACGGCTCGCGC GAAAACAG GCGCGAGCCGTCGGGACCGCGACAGC TTCCTTCCGCTACTT 86 35 LT478_RS05010 1219206 .. 1219234 - -8.8 -3.55444 TTGGTACCCTGTAAA CGGCGTGCGACC TGCGT GATCGCACGCAA TCGGCGTATGCAAGC 66 90 LT478_RS05005 1217958 .. 1217972 - -7.1 -2.65112 AACTCACGTACATCA GCGGA CGCCT TCCGC CTCGAGTCCGTCCAG 49 8 LT478_RS05000 NONE LT478_RS04995 1216822 .. 1216845 - -6.6 -3.28712 GTTCGGCCGTGAGAA GGCGAAAGCG TAGG CGCCTCTGCC TCGATGCCTGCTAGC 56 36 LT478_RS04975 NONE LT478_RS04970 1207343 .. 1207368 - -17.7 -3.10164 CCATTTAGTATGCAA GAAGACCCCGA ATGC TCGGGGTCTTC CTTTATTTCCCGCCT 89 28 LT478_RS04945 NONE LT478_RS04940 1196395 .. 1196418 - -19.6 -3.04322 GTGAACGTGCGAATA GCGGGGGCGA TTAT TCGCCCCCGC TCCAACTGGCTCATC 90 74 LT478_RS04885 NONE LT478_RS04880 NONE LT478_RS04875 1180264 .. 1180278 - -4.2 -3.41527 GAAGCTGTACCACAA CGAGTT CGT ATCTCG TGGGCGCGAAGAGGG 49 194 LT478_RS04800 1162488 .. 1162500 - -5.5 -2.93585 CCATATGCCAAAGTA TACCG TGT CGGCA CGACCTGTGGCAGCA 48 63 LT478_RS04795 NONE LT478_RS04790 NONE LT478_RS04785 1160132 .. 1160144 - -5.5 -4.12942 CGAAATGTTTGAAAA CGACG TTT CATCG TGGTGTGCTGGCACA 65 20 LT478_RS04780 1159191 .. 1159229 - -16.9 -2.96274 GCCTGCATAACGAGA CAGGGCTTCC-GCACG TATGAAAG CGTGCTGGAAGCCCTG TGGGTTGCGCATACA 85 55 LT478_RS04755 1149837 .. 1149857 - -2.4 -4.08974 ATGTCAGTATAGAAA GCGAACGC GTGCA GCGATCGG CATGCGGGAAGCCGT 57 62 LT478_RS04750 1148906 .. 1148919 - -2.3 -3.54488 TTGTTTTAAACAACA GTCGC AAGC GCGAG TTGGTATATTACGGG 47 149 LT478_RS04745 NONE LT478_RS04740 1148651 .. 1148676 - -16.2 -5.48213 GATCGAAAAGAAAAA GGCCAGGAGC TTGTGC GCTCCTGGCC TACAATTTATTGGTA 100 36 LT478_RS04735 NONE LT478_RS04730 1145404 .. 1145414 - -4.6 -3.39327 CGTCGACACCGAGAA CGCC CAC GGCA CGGGCTGCACGCTCT 51 390 rnpB 1130831 .. 1130841 - -8.2 -2.71712 CGCCTTCCGCGAAAG GCCC GCC GGGC GCTTCCGCTCGTCTC 53 137 LT478_RS04650 NONE LT478_RS04645 1129101 .. 1129155 - -8.5 -4.4009 CCCTATGGCAGAAAA CGCGGGGCATTGGTCGCAGATTCCTC GTAT GCGGAATCTGCGACCAG-GCCTTATG TGCCCGCGCAATACC 77 132 LT478_RS04585 NONE LT478_RS04580 NONE LT478_RS04575 NONE LT478_RS04570 NONE LT478_RS04565 1112851 .. 1112909 - -9.29999 -2.73681 TAGCGAGTCGAAGGA TCTCGTGCGGCGGTTCGGGGGTTCCCG GCAGG CGGGAACCCCCGAACCGCCTGTTTTAC AGCATGCGCGATGTT 57 22 LT478_RS04480 1090272 .. 1090285 - -9.5 -2.8511 CAGCATACCACGATA GCGGG CGAA CCCGC GTCAAACCATCAGCT 59 76 LT478_RS04475 NONE LT478_RS04470 1088082 .. 1088104 - -5.5 -4.56597 TCTTCGCCCGAAAAA CACGCCTCA GACGT TGGAGCGTG TTTTTCGGGCGAAGA 74 70 LT478_RS04445 1083346 .. 1083398 - -28.7 -2.53263 GGCAGTCGCAACCCA TCATCGCCCGAAAAACGCGCTCCAG CCG CTGAGGCGTGTTTTTCGGGCGATGA TGGGTTGCGGCCCGG 100 52 LT478_RS04435 NONE LT478_RS04430 1078847 .. 1078871 - -4.8 -3.61398 CGGCGCCGTGAAGAA GGCCGACACC ATCGA GGAGCTGGCC GATATGCTGCTGCTC 55 453 LT478_RS04420 1075648 .. 1075671 - -21 -3.53012 CCCTCCCTCCGCAAA GCGGCCCGGC GATC GCCGGGCCGC TTTCGCGTGCTTCCT 100 39 LT478_RS04400 1068299 .. 1068311 - -5.5 -2.75294 GCAAATGTTCCAAAT GAGGA CCG TCCCC TTATGGGCTGTTCGC 46 40 LT478_RS04395 1067898 .. 1067914 - -4.3 -4.83169 ACCGGTGTAGAAAAA TGTCCCC ATT GGGAACG GGCGCCTTTTGGGCA 78 42 LT478_RS04385 1065551 .. 1065583 - -25 -3.27022 CGCACGGGAGACGAA GAAGCGCCCGCGGA GTGAT TCCGCGGGCGCTTC CGTTCGTTCGGGCAG 100 56 LT478_RS04295 1053432 .. 1053453 - -17.3 -4.89477 CCCCGAACAAGAAAA GGAGCCGCC CGAG GGCGGCTCC TTCCGAACGATCGCA 100 56 LT478_RS04265 1040841 .. 1040866 - -18.3 -3.66908 CTTTCTCAAAAGCAA GGGCCCGCTCC TTGC GGAGCGAGCCC TGGGGGTTGCCTTGC 100 63 LT478_RS04260 1039794 .. 1039823 - -3.5 -3.91897 GCTTGCACTGACAAA CTGCTGCCTGCA TCGCGCG CGCAGGC-GCGG TAAGGCGTAGACAAC 56 136 LT478_RS04255 NONE LT478_RS04250 NONE LT478_RS04245 1035855 .. 1035879 - -19.3 -4.96848 GTCGCCACATAAAAA GCGCCCCCGGT TCA ACCGAGGGCGC AGGGGAAACGTCGTA 100 44 LT478_RS04240 NONE LT478_RS04235 NONE LT478_RS04230 1033081 .. 1033108 - -19.2 -5.14965 ACGGGCATGAAAAAA GCCCTGGAGGGA TGAT CCCCTCCAGGGC TTCGCGCATCGGGTT 100 50 LT478_RS04090 NONE LT478_RS04085 NONE LT478_RS04080 1007462 .. 1007482 - -6.9 -3.08298 CAAGCAAAGGACATA CGCTTTTCA CTA TGAAAAGCC ATCCTTTGCTTAGGC 52 75 LT478_RS04075 NONE LT478_RS04070 NONE LT478_RS04065 NONE LT478_RS04060 NONE LT478_RS04055 NONE LT478_RS04050 1000627 .. 1000639 - -4.8 -4.36914 GCCCTTCTGAGAAAA CGTG CGCTC CACG ATAGGGCTTCGCGCA 68 216 LT478_RS04040 998551 .. 998561 - -6.8 -3.62224 AGACCCGCGCAAGAA GCAC GTC GTGC GAGGGAAAGGATCTG 60 113 LT478_RS04035 995660 .. 995675 - -10.4 -2.87132 TGGCGCGGCGAGAGA CGCACG AGCC CGTGCG CTCTCGCCGCGCCAT 62 62 LT478_RS04015 990378 .. 990393 - -3.9 -4.19238 CCGTGAAGCTGAAAA CCGCC CCGCAT GGCAG AAAAAAGCCGGTTTG 62 375 LT478_RS03950 974141 .. 974188 - -23.6 -3.54424 CCTGACCGTGCCAAA TCCCCCGTCCCTTTGACACACT CAGG ACCGTGTCGAAGGGACGGGGGA TTTGGCACGCTTCCT 100 47 LT478_RS03900 962265 .. 962304 - -13.5 -3.54459 CCAACGCGTTTCAAA CGTGCGGGCGGCACCCGC CTTGC GCGGATGCCGCCCGTT-G TCATGAGGATTGTGG 86 89 LT478_RS03895 NONE LT478_RS03890 961081 .. 961100 - -2.8 -3.7282 CGACGTGACGAAGAA GCTGGT-GG AAG CCTACCAGG CTGCGCGCGCTGCGG 52 150 LT478_RS03880 958319 .. 958351 - -23.6 -3.51232 CTGTTCCGAAATGAA GAAGCGGGCCCATC GCGAT GATGGGCCCGCTTC GTTTCTGCTGCGGCC 100 44 LT478_RS03860 954277 .. 954292 - -3.2 -3.08133 CATCGAGCGAGCGAA GGCC GAGGTCGA GGCC CGCACGAAGCGCATC 43 175 LT478_RS03850 951970 .. 951993 - -18.2 -4.56597 TCCCGGCGTGAAAAA GCCTCTCCGG GGTT CCGGAGAGGC TTTCAACTGCGGGCG 100 71 LT478_RS03835 948001 .. 948055 - -17.1 -4.62783 TACGCATCTGAAAAA GCGTAACGA-CGACGGGGGCGGCCGC GTGA ACGGCCGCCCCCGTTTCTCGTTCCGG CAACCGCGTGGCCGC 100 40 LT478_RS03770 931297 .. 931309 - -3.4 -3.84451 CCTCCGAAATTTAAA CGAT GGTTT ATCG AGGGTTTGACCTGCC 54 289 LT478_RS03765 929892 .. 929923 - -19.6 -3.136 TCAAGAGGCAATAGA GGGCAAGACCAAGA TTTC TCTCGGTCTTGCCC TGTTCATATATCTCC 91 164 LT478_RS03740 924509 .. 924519 - -3.2 -3.5594 AAGTCACTTGGGAAA GAGA AGA TCCC GTATTCCCTTGTCGT 51 392 LT478_RS03725 NONE LT478_RS03720 NONE LT478_RS03715 915471 .. 915499 - -18.9 -3.61398 CGCGCCTCGCAAGAA CGGTCCTGCCGCA GCA TGCTGCAGGACCG TTCGCGTTTAGGAAT 100 67 LT478_RS03690 NONE LT478_RS03685 909703 .. 909722 - -4.2 -4.74132 ATACTTGACGAAAAA CCG-CACGG AGG CCGCGACGA TGCGGCCTCGTTAAC 78 473 LT478_RS03605 NONE ppk1 885915 .. 885950 - -17.6 -3.62096 CCGCATCATCCGAAA GCAACGCCCTCGGCTC CGAA GAGCCGAGGGCGTTTT CATGCGAGAGGAAGT 100 47 LT478_RS03595 885166 .. 885195 - -9.9 -3.33162 CAGCGGACTGTAGAA CTCCC-GAGCACGC GAA GCGAGCGCAGGGAG GCCCCGCGAAGCGGG 68 279 LT478_RS03570 872499 .. 872517 - -6.6 -3.78934 CCTGCGCGAGAACAA GCTGAGCT ACC AGCCCTGC GCCCTCATGGAAAAG 62 311 LT478_RS03560 870792 .. 870827 - -12.4 -2.83164 CGAGCCAGTATGACA GGTGCGGCGGTCCCGC GCAC GCGAGACCGCCTCCGC GACGGGCGCGTTTAC 69 37 LT478_RS03555 NONE LT478_RS03550 868924 .. 868946 - -2.6 -2.72991 TTACAGGGTCAACGA GCGCGCGGC GACTAT GCC-CGCGA TTGGCGGGTTCTCGG 39 63 LT478_RS03545 NONE acs 866147 .. 866179 - -29.3 -3.59979 CCGCCCGACGCGAAA CCGCCCGCGATCCGT TCG ACGGATCGCGGGCGG TCCTTCGTGCGCGAG 100 49 LT478_RS03525 NONE LT478_RS03520 NONE rsxC NONE LT478_RS03500 NONE LT478_RS03495 NONE LT478_RS03490 NONE LT478_RS03485 NONE LT478_RS03480 NONE LT478_RS03475 NONE LT478_RS03470 NONE LT478_RS03465 855050 .. 855062 - -6.2 -3.18264 GCGGTCAGGCACGAA CGCG CTTTC CGCG GTCGGCCGTCGCATG 50 2 LT478_RS03460 NONE LT478_RS03455 853682 .. 853720 - -26.1 -4.3739 GAGGCCCTGAGAAAA GCGAACGCCCGGCAGGC ACGGG GCTTGCCGGGCGTTCGC GAGCAAACGGTCGCC 100 47 LT478_RS03440 849197 .. 849243 - -7.9 -3.32844 CGCGTGACCGTAGAA CTGCAGTAGCCGGCGT-ATCGGG CGC CCCGGCGACACCGGCT-CAGCCG GTTCGCTTGAAGCTG 59 19 LT478_RS03415 844392 .. 844432 - -12.5 -3.16683 ATGCGAGTGCAGCAA GATGCAAGCGACCGACGGC CAG GCCGACAGCCGGTTCCATC TTGCCGCCACGATCG 74 50 LT478_RS03410 842756 .. 842787 - -24.5 -3.60792 CTCCGAAGCCCGAAA GGGCCCGCTGCCG CATGTT CGGCAGCGGGCCC TTCCCTTTTGCGCGG 100 473 LT478_RS03385 NONE LT478_RS03380 835157 .. 835173 - -5.7 -2.8934 CTGCAAACGACCATA CGCCCGC CGT GCGGAAG AGGGAAAGTTTATAA 48 103 LT478_RS03375 NONE LT478_RS03370 831740 .. 831757 - -4.8 -2.78596 GAGCGGGGGATTATA CCGGTCG CGTTT CG-CCGG AGTGCGGGATTATAT 43 246 LT478_RS03365 829883 .. 829914 - -15.8 -3.57561 GCGTAAGCGCCGAAA GCGTGCGGCCCGTCG ATG CG-CGGGCCACGCGC TTCTCCATCGTGAAC 93 349 LT478_RS03340 NONE LT478_RS03335 823314 .. 823332 - -4.4 -4.85267 AGAAAGGAGTAAAAA CTACGACG CTG CGTCGGGG TCAAGCGTCCTGTGA 78 26 LT478_RS03330 821892 .. 821904 - -4.8 -2.71712 GCGGCCGTTGGAAAG GTGC GACTT GCAC GCAATCGGGCTGAAA 43 56 LT478_RS03325 820395 .. 820421 - -3.4 -3.44051 GTTCGAGGAGCACAA TCGGCGGCTGCC CGA GGTGGCCGACGT GCTGGCGGATGCGGA 49 359 LT478_RS03310 817738 .. 817748 - -3.2 -3.90744 CTCGCGGGCAAAGAA GACA TGG TGCC CTGCGAGCTGTCGGG 56 397 LT478_RS03230 NONE LT478_RS03225 799191 .. 799204 - -3.8 -4.30995 CCTGCGATAAAACAA GGCT GGGCGT AGCC GACATGAAGGTGCCT 65 154 LT478_RS03125 777781 .. 777816 - -14 -3.53444 TGATGGCGGTCGAAA CGACGCCGCGCCCCG GGGAGGT CGGGGCGCGG-GTAG GATGCTGCGCGCGGG 86 74 LT478_RS03085 766048 .. 766082 - -7 -3.62224 AGACGCGCTGAAGAA CGCCGGTCTCGAAGGC GAG GCGCTCGAGAACGCCA AGGCCAGCGTCGAGC 59 455 LT478_RS03075 762684 .. 762701 - -11.3 -5.64274 GCAGGCATAAAAAAA TGGGACG CGAA CGTCCCA AAGAAAGACAAAGGG 100 226 LT478_RS03000 746293 .. 746325 - -14.2 -2.71815 GAGCGAAAGAACGCA TCGAGGGGCCCGTTG ATCT CAACGGGCCCCT-GT TCTATCCGAATGCGT 73 57 LT478_RS02975 739815 .. 739840 - -20.5 -2.77999 TAGCGAGCAAGACGA CGAAGGCGGCC GAGA GGCCGCCTTCG CTTGGGAGAGGGAGG 95 55 LT478_RS02910 720499 .. 720521 - -14.9 -5.37593 TTGCAAAGTAAAAAA GAAGCGCCC TGAAC GGGCGCTTC TTTTTTGTCAGCGGT 100 46 LT478_RS02870 711490 .. 711508 - -7.4 -3.32268 CAACTACGCCGAGAA CCTCACGA GCA TCGCGAAG AACCGCCTGACCGAC 58 169 LT478_RS02860 709589 .. 709638 - -7.8 -2.79183 TGGAGGTGTACGACA CCTCCCG-CGTGCATAAGGC-CGT CATC ACGCGCCCCATGCTCGACGGGGTG GCCGACCAGCTGGAA 52 419 thrC NONE LT478_RS02805 698683 .. 698728 - -4 -3.65046 GCTCGATCTGAAGAA TCGCACCCAGCTGGTCGTCCGC TACT ACCG-CGACC-GCTGAATGAGA CAGGGGAATGAGACA 51 53 LT478_RS02790 NONE LT478_RS02785 NONE LT478_RS02780 693225 .. 693239 - -7 -3.62046 GGAGCGTCTGAACAA CCCGCC GAA GCCGGG CCGCCCGCGCAAGAG 59 184 LT478_RS02645 672916 .. 672944 - -26.1 -4.90266 GTCAGCAATGAAAAA GAGGCCCGCCGGA GCA TCCGGCGGGCCTC TTCGCATCCCGTGGT 100 37 LT478_RS02625 667220 .. 667250 - -3.9 -4.26903 GCGACGCGATCAAAA GCATCGTCATCGA AGGCG CCGACGAGGAGGC GCTGGCCGAGGCGAT 66 195 LT478_RS02615 NONE LT478_RS02600 660302 .. 660325 - -9.6 -4.25256 TCGGCAGCAAAAGAA CGGATGTTTC AAGT GAAGCATCCG GGTTCCGCCCTTTCC 79 356 LT478_RS02580 653306 .. 653321 - -4.6 -3.5394 AAACCCCCTTGCAAA CGACGG ATCG CCCTCG AGGAGGGCTGGCGGC 52 405 LT478_RS02560 647267 .. 647307 - -3 -4.25104 TTCTCGCGAGGAAAA GCGGATCGCGGGCGTGCGG GCGG CCGC-CGAACGCGGTGCGT ACGCAGGCCGGAAGC 64 208 LT478_RS02530 639608 .. 639626 - -6.8 -4.70921 CATAACAGAAACAAA TATTGCAT ATA ACGCAATA AATAGCAATATTTGT 78 220 LT478_RS02525 NONE LT478_RS02520 637924 .. 637939 - -4.6 -3.5394 AAACCCCCTTGCAAA CGACGG ATCG CCCTCG AAGAGGGCTTCGGGG 52 60 LT478_RS02500 632032 .. 632051 - -7.8 -2.78547 GCACTCCATGAAGGA CCTGCTCG GCTG CGACCAGG TGTACGAACGCTAGG 53 98 LT478_RS02490 NONE LT478_RS02485 NONE LT478_RS02480 NONE LT478_RS02475 627241 .. 627275 - -3.5 -4.07568 CGCTCCCGGGCAAAA GGCGGCTCGTC CCCCAAAGCCCTT GCCAAGCCGCC TTTTGCCCGGGGTCG 59 109 LT478_RS02470 625228 .. 625250 - -10.6 -4.56597 TCCTCGCTCGAAAAA CACGCCTC GTTCGCT GAGGCGTG CTTTTCGAGATCGTC 89 77 LT478_RS02450 617932 .. 617947 - -11.8 -3.92522 TCTCAAGCTGAGAAA GGCCCC TATC GGGGCC TTTCTTGAGGGAGGG 82 61 LT478_RS02440 615285 .. 615295 - -2.4 -4.82901 TCTGTTGCACAAAAA CCCG TGA CGTG CGATCTGAACCGATG 72 302 LT478_RS02420 610806 .. 610856 - -8.2 -4.39329 ATGCGAGATAAGAAA GCGC-ACGCCAACACCCGGC-CCC ATGCA GGGTGCCGGGCATTGGCGAAGTTC GGTTTTTGCGATCGA 77 50 LT478_RS02380 NONE LT478_RS02375 NONE LT478_RS02370 NONE LT478_RS02365 599032 .. 599078 - -17.5 -3.01712 GGCGGCGGCGCAAGA TCGAGGCAAGCGGGGCCG GGGGAGGGGGAT CG-CCCCGCTTGCCTCGA TCGGTTCCGGGAAGG 87 109 LT478_RS02360 594958 .. 594974 - -2.1 -3.28712 GGTCTGGGCGTATAA GCCTAGG AGT CCTTGTC CGCCTCGAAGAAGCA 44 11 LT478_RS02330 587472 .. 587496 - -5 -3.83205 AGCGCTCACAGTAAA CCCAAAC-CGC CGAA GCGAGTTCGAG AGCCGTGGGGAGTTA 57 174 LT478_RS02325 583292 .. 583311 - -5 -3.01712 CGTGCTCCGCCAAGA GGATCGTT GCGC AACGATCG GGACGCAACAGACAG 46 469 LT478_RS02315 580733 .. 580748 - -6.8 -3.31792 GCACGACCGCGATAA GCTGGA CGCG CCCAGC GGCACCGCCGTCATC 55 350 LT478_RS02260 566061 .. 566108 - -31.6 -3.88583 CAAAGGTGTGACAAA GGGACGGGTGATTCGACACCCT TTAC AGTGTGTCGAATCACCCGTCCC TTTGTCACGCGGCTA 100 38 LT478_RS02230 558646 .. 558659 - -4.5 -3.21924 TGAGCGGTGACAACA GCACG GTGT CGTAC AACGAGGTGCAGGTG 47 435 LT478_RS02215 554545 .. 554555 - -6.8 -3.53012 GCCTTGCGGTGGAAA GCGA GGG TCGC ATTGCGGGATTCGGC 57 173 LT478_RS02200 550074 .. 550093 - -15 -3.20382 TGGGACATTGAGGAA CGGCTCGG GTTT CCGAGCCG TTCCGTTTTGGAGGG 82 63 LT478_RS02170 543225 .. 543236 - -2.2 -3.44527 CATCGATTACGACAA TACG CGGG CGCA TCTCGGAGAGTTCGC 47 5 LT478_RS02140 535592 .. 535604 - -3.3 -3.53444 GCCTCGAACAAGCAA GAGCC CTC GGCTA GCTTCCTGGTTCGGG 49 23 LT478_RS02110 528865 .. 528890 - -3.9 -2.71791 ATTCCTGCTTGAAAC CGACAGGCTAC TGAA GTAACGGGTCG TCGTCCTCGTCGAGC 41 7 LT478_RS02090 523987 .. 524010 - -14 -3.20348 TCGAGCAACAGCGAA CGGATGTTTC ACGT GAAACATCCG CGGGTTGCGCTCTCG 78 129 LT478_RS02075 520347 .. 520370 - -16.7 -3.61922 AACACGCACTGGAAA CGCCGCCCG GACGAA CGGGCGGCG TTTTTTTTGCGTGCC 100 211 LT478_RS02055 NONE LT478_RS02050 512213 .. 512231 - -6 -2.83343 AGATCGACGACGATA GCGTAATG CGA CATTATGC GGCACCTCCTCCGGT 46 20 LT478_RS02045 NONE LT478_RS02040 510745 .. 510799 - -25.9 -2.53213 CAAGCGGTCAACCGA GCCGATGCCGAAGCGCTGTCGGG GAGGGGGAT CGGGACAGCGCTTCGGCATCGGC CGTCTCCCCGGCTCG 100 62 LT478_RS02035 NONE LT478_RS02030 508959 .. 508979 - -5.4 -3.01712 TGGGGCGGGGCAACA CGCTCGCGC GCGT GCA-GAGCG AGCTGGTCATCTCCG 46 165 LT478_RS02020 NONE LT478_RS02015 504940 .. 504970 - -16.9 -4.61873 CGCTAGAAACGAAAA GCGCCCCGGCT GAGGGAGGG AGCCGGGGCGC ACGGGGAGGGTGACG 100 52 LT478_RS02005 501035 .. 501053 - -2.3 -2.77895 CTCATGTCGAACAAC GTGCTGCC GCTG GGC-GCTC TGGTGTTCCTGCTGT 38 294 LT478_RS01995 NONE LT478_RS01990 NONE LT478_RS01985 496737 .. 496784 - -29.3 -3.48342 AATGAAGCATCAGAA TCGCGAACGGGGGCGGGGACGC ATCGA GCGTCCCCGCCCCCGTTC-CGT CCGCGCACCCGCCGC 100 61 LT478_RS01975 491559 .. 491590 - -23.2 -4.13767 TGTCGCAGTGCAAAA GAAAGCGCTCCTGC ATAA GCAGGAGCGCTTTC TTCGGTTTGTGCTGC 100 51 LT478_RS01965 486666 .. 486679 - -5.2 -3.91072 CGAAACGTCCACAAA GCGG CTTCTT CCGC GCCGCACCTTCCTTA 59 38 LT478_RS01960 485869 .. 485888 - -16.4 -3.59262 CCGCAGACGTGGAAA CGGCCGCC CGAG GGCGGCCG TTTCTGGCAGATGGA 93 59 LT478_RS01955 485006 .. 485020 - -5.6 -3.1247 AGCGCCTACAGCGAA GGCTTC AGC GACGCC GCCCTGAAGAACATG 49 184 LT478_RS01920 477563 .. 477594 - -2 -3.78022 GGGACATCGAGGAAA GCTGCCGGGGATGC GAAC GGGCGCCCGGCAGG GGCGCCCGTTCAGGG 52 66 LT478_RS01905 475228 .. 475257 - -3.4 -4.07568 CGGTGCGTGCCAAAA CTGCAGACGGCA TGGTTT CGCCGCTTGCGG CGACGCTGTTGTTCC 60 119 LT478_RS01890 NONE LT478_RS01885 469974 .. 470000 - -22.4 -4.17048 TTTGGGTGAAAACAA GGAAGGCGGCCA CGG TGGCCGCCTTCC GGTGCGCTTGCGTTT 100 50 LT478_RS01880 468750 .. 468760 - -6.8 -4.3586 TTACGCATATGAAAA TCGC AGG GCGA AATTCTCCTCTGCCG 75 344 LT478_RS01860 463783 .. 463803 - -3.9 -3.04263 AGTCCACGGTGAAGA CGCACATGC GCA ACCTGTACG GCAAGCTGGACGTCC 44 99 LT478_RS01850 460505 .. 460534 - -20.7 -2.53911 CCAACCGCTAACCGA GGCTGCGGCGGCC GTCG GGCCGCCGCAGCT GTCGGACTTTCGTTT 95 39 LT478_RS01815 453654 .. 453694 - -6 -4.46926 TATGCGAGCAGAAAA GAGCCCCAGGCGGCGGAA GGATT TTCTGTCACCTGGGGTTT CTCTAGTTGCTCTGC 74 181 LT478_RS01795 448655 .. 448667 - -9.1 -3.23216 GGCCACCACCAGCAA GGCGA TTA TCGCC GCCGTCGAAGATGCC 61 177 LT478_RS01775 NONE LT478_RS01770 NONE LT478_RS01765 440257 .. 440278 - -2.2 -3.81287 TAGAGGATTACGAAA TTGCGCTC GCCATG AAGCGCAC TATAGAAGACTCGGG 53 485 LT478_RS01740 433195 .. 433231 - -12.4 -4.52857 AGCGCGGAGAGAAAA CGACGAAGACTCCGC TGTTGGTG GCGGAGCCTTCG-CG GGGAGGGGACGCGCG 100 54 LT478_RS01620 NONE LT478_RS01615 409207 .. 409226 - -11.4 -3.17212 GGACTATCCCATCAA CGTGGCCG GCAA CAGCCACG GCCGCTGCATCACCT 66 437 LT478_RS01605 405573 .. 405598 - -10.3 -3.27923 CTTCAAGACGACGAA CGACCGCTACG GCCA CGTGGCGGGCG ACCGCGTGATCGTGG 65 382 LT478_RS01585 398181 .. 398213 - -9.7 -2.71712 CGGGCTGGTGGAAAT CGGGCGCACGAAGGA AGG CCCGTCGTGCGCGGG TGTTCGAGCGGACTG 57 84 LT478_RS01580 NONE LT478_RS01575 NONE LT478_RS01570 NONE LT478_RS01565 NONE LT478_RS01560 391308 .. 391347 - -10.1 -2.82623 GGGCGGCCAGAAGCA GCGCCTCGCC-GTGGCG GCCTGCAT CGCCACCGGC-AAGCGC CTCCTCGTGTTCGAC 60 317 LT478_RS01540 387257 .. 387267 - -3.2 -3.31144 CGTCGACCCGGAGAA CGAG CAG CTCA TCCAGCAGGCCATCG 47 321 LT478_RS01435 364179 .. 364236 - -11.3 -4.62783 CACGGATCCGAAAAA GCGCGAGACGCGCAACGTATGCGG CAGCGCAGGAC CCGCGGACGTTGCGCTCCTCGC-C TTGCGTCGTTCTCCC 95 148 LT478_RS01430 363327 .. 363345 - -10.2 -3.02144 GCACCTCGCTCAACA GAGCCGCG TCC CGCGTCTC ACGTGCCGTCCGCTC 64 46 LT478_RS01425 NONE LT478_RS01415 NONE LT478_RS01400 356330 .. 356345 - -4 -3.53811 GCGACGTCGTGGAAA TC-GTGG TGT CCACCGA GGACGTCGCGCCCGC 51 440 metA NONE LT478_RS01360 348977 .. 348989 - -2.7 -3.08977 GCTGAAAAAAGAGCA TAATC GAG GATCA AATGAAAGAGGAAGT 41 45 LT478_RS01355 NONE LT478_RS01350 348236 .. 348274 - -5.1 -4.4078 CGGTTGGAACTAAAA GAGGCGAGGGGTGCTTC GACTT GAAGCGCCCCCCGTTTT GTTCCCGCTAGATCT 68 33 LT478_RS01335 344017 .. 344063 - -19.7 -3.17075 TCCCGTCCAAGCGAA TGCGAAGGCCCGATCGACGC-CA TCA TGCGCGTCGATCGGGCCTTT-CA GGAGGGGAGGGGATT 91 52 LT478_RS01285 332026 .. 332058 - -20 -5.37345 CGGAATGAGAAAAAA GCGGCGAAGCGG-GA TTTC TCGCCGCTTCGCCGC CTGTGAGCGCCGCCG 100 136 LT478_RS01280 NONE LT478_RS01275 330295 .. 330317 - -11.3 -2.57132 CCTTTCTTCTAGAAT GCGCA-CGCC CGAT GGCGGTGCGC TGCCGGATAGAGTGG 64 165 amaP NONE LT478_RS01265 NONE LT478_RS01260 328489 .. 328515 - -18.7 -4.56597 CCCGCTCGTTAAAAA GCCCGCCGCGC GGGAG GCGCGACGGGC TTGCAACACGGGGTG 100 92 LT478_RS01245 NONE LT478_RS01240 321295 .. 321309 - -8.5 -3.53224 TATGGCTGCGGCAAA GCGCC TGATG GGCGC CGCGCACGTGCGAAG 62 71 LT478_RS01230 319387 .. 319399 - -4.8 -2.94561 CCTCAAGAAATAGGA GCGT TGCAG ACGC GACAACTCACGGTGT 45 90 LT478_RS01185 308168 .. 308187 - -7.8 -4.11692 CACCTATCGCGAAAA CCTCGAAG CCGA CCCCGAGG CGAACCTCAGCGCCG 71 247 LT478_RS01175 305822 .. 305843 - -2.3 -2.82933 TCGCAACGCAGTATA CGCTCAACTT CCC AAGCC-AGCG CAGTATCATGCCTCA 40 328 LT478_RS01115 293432 .. 293456 - -20.1 -3.90112 GTCGTCGCAACGAAA GAAGGCGCGCA TCA TGCGCGCCTTC TTGCTTGATGCGGGG 100 49 LT478_RS01005 267926 .. 267953 - -15.6 -3.54741 CAGCATCTTCCGAAA GAGGCAAGCCGA CTTT CCGGCCTGCCTC TTTCTTGCTCTAGTT 93 35 LT478_RS00980 260937 .. 260949 - -4.8 -2.91264 CCCTTCATGGATACA GGCA TGCCG TGCC CTCCTGAGGGGCGCG 45 97 LT478_RS00975 259761 .. 259793 - -20.7 -3.16191 CGATACGCTCACGAA TGGCGCGAAAGGGGA CTG TCCCTTTTCGCGCCA CTTAGATATCCACGC 95 27 LT478_RS00965 NONE LT478_RS00960 NONE LT478_RS00955 255122 .. 255132 - -2.4 -3.04144 GCTTGATGTCGAATA CGAC GGC GGCG TTCATGCGGAAGCCG 41 511 LT478_RS00940 250275 .. 250291 - -12.3 -4.11216 GGTGGATTGGGAAAA CCCTCCA TAG TGGAGGG GTGGAGGGTGGAGGC 89 259 LT478_RS00935 248450 .. 248477 - -18.4 -3.64703 CCGTTCGTATGCAAA GCGCCCTCCGGC GAGA GCCGGAGGGCGT GAGGGGAGGGAAGGC 100 93 LT478_RS00930 247033 .. 247053 - -7.5 -3.66178 CTTCCGAACGCGAAA CGGCCCC GGGCAAT GAGGCCG TTTCGATGAGACAAA 60 334 LT478_RS00920 244865 .. 244879 - -9.2 -3.57144 CTCGTCAGCCTCAAA GGACGC AAG GCGCCC GCCTATGCGGGCTTC 68 114 LT478_RS00910 NONE LT478_RS00905 NONE LT478_RS00900 239822 .. 239843 - -7.1 -3.01712 GGGCGCCCCCGAAGA CGTGGCCGC CGCC GCGGCCTGG CTCGCGTCCGACCAG 50 130 LT478_RS00890 NONE LT478_RS00885 NONE LT478_RS00880 234562 .. 234602 - -23.3 -2.60723 GTATCCCGAAGGAAT CCCCGCCCCGCATCGCAAG TTC CATGCGATTCGGGGCGGGA GGCGCAGTTACGAGG 100 33 LT478_RS00875 233701 .. 233718 - -2.6 -3.92542 GCGAGCGCGAAACAA TGCGGT CAGTAT ACCGCG AATGTCTTGCGCGCT 54 137 LT478_RS00870 231311 .. 231338 - -18.4 -2.52896 TGATGGCGTAATTCA GCTCCGGCGGCT TGTC AGCCGCCGGGGC GGCTCGTACTGTTGG 85 428 LT478_RS00835 217860 .. 217897 - -18.6 -4.07568 TGCTTGGCGCCAAAA CGACGAAGCCCTCCAAC ATCTG GTCGGAGGGCTTCG-CG GGGGGCGGTCGCGGA 100 50 LT478_RS00825 214067 .. 214106 - -19.3 -3.21276 TTTCCTGCGAGAAGA GGGAACCGCCCGATCGG TTGGAG CCGGTCGGGCGGTTCTC GTTTTCCAGCTCGCC 91 84 LT478_RS00815 209312 .. 209351 - -12.1 -3.78934 TTTCTGCGAGAAGAA GCGAATCGCTCGATCGG TTGGAG CCGGTCGGGCGATTCTC GTTTCAGTCCGCCGA 85 84 pxpB NONE LT478_RS00795 NONE accB 205484 .. 205498 - -2.7 -3.02144 GTATCTTGTCGAACA TGGCG CGCGC CGCCC TAGTGCGTTTCGCCG 41 25 accC 204059 .. 204071 - -10.5 -3.62096 CCGCACGAGCCGAAA CGCCC AGT GGGCG TTTCGTGCGAGCAGG 73 89 LT478_RS00780 202540 .. 202577 - -16.3 -3.6215 TCAACCTATTGTAAA GCAACGCCCCGCGCC AGGTGAAG AGCGCGGGGCGTTGG GTGCGAGTGTTTCAC 93 71 LT478_RS00775 201705 .. 201715 - -8.2 -3.63627 TGCGGATATCGGAAA CGGG GTT CCCG CTTCGAAGGGCGTGC 64 45 LT478_RS00745 191882 .. 191913 - -21.7 -3.00498 CACACTGCAGACACA GAAGCGCCCTCCC GGGAAG GGGAGGGCGCTTC TTCTCGAGGCGTCTG 100 76 arcA 189257 .. 189290 - -13.2 -2.90496 CGCCTGGGGAAAGGA GGCGGTTGCGCG-GA GCGAA TCGCGCGCAACCGCT GTTGGCGATGGAAAA 75 43 LT478_RS00725 187370 .. 187406 - -21.7 -4.36914 GCTGGTGGTAGAAAA GCAGGTAAGGAGCCTGA ACT TCGGGCCCCTTACCTGC ATAGTTCAGGCGCCT 100 280 LT478_RS00665 170295 .. 170321 - -17.3 -4.21936 GCGAGAATGCGAAAA GCGCCCGAGAG ACGAA CCCTCGGGCGC TTCCGACAGAGAAAT 100 54 LT478_RS00640 162207 .. 162250 - -4.3 -3.64866 ATACCACAGCGTAAA GCCGCCGTTCGCCG-CGGGA GGTAT TCCGGACGGAGCGCGGCTGC TGCAAATACTTCAAA 54 67 LT478_RS00635 159488 .. 159499 - -7.2 -3.29562 AAAGCGAGTATAACA CGGC TATG GCCG CTTCTGAGGAGTGCC 56 57 LT478_RS00630 157274 .. 157294 - -5.3 -3.06831 TCAAGCTCGATCGAA CCCGCCG AGCTCGG CTGCGGG TTCGAGATGGCTCGA 49 57 LT478_RS00625 157037 .. 157069 - -16.4 -4.18018 GGTCGCGATGCAAAA CGAGCTCCTGAAAC GCAAG GTTTCTGGAGCTCG TTCATCTGCGAAGTG 100 39 LT478_RS00595 147723 .. 147760 - -21.3 -3.76968 AACGCACGCAGCAAA GCGCGTCGGCCCGATCC AGCG GGATCCGGTCGACGCGC TTCGGGAGGAGGGGT 100 50 LT478_RS00585 143806 .. 143853 - -9.1 -2.70932 CGTTCTGGGCAAGGA CCGCA-GCGGCATCGTCGCGGAGG TTG CCACCGCG-CT-TGCCGAGTGCGG CGCGAACATCGACGA 56 451 LT478_RS00565 137623 .. 137676 - -7.3 -4.43911 AAAGCTGAAGGAAAA GTTCTGGACGGCTGCGTGCGC-TGAG TAC CTGAAGCGCATGCAGCCGTACGGTAA GACCGAGGTGCGCGA 78 470 LT478_RS00525 128863 .. 128885 - -3.3 -3.54543 ACCGACCCGGCGAAA CCCGTCG ACCCTGCCG CGCCGGG CACTCCGTCGACCTC 49 203 LT478_RS00510 124123 .. 124160 - -24.3 -3.48276 CGGTTGCGCATACAA GAACGGCTCCTCGGCGA GGGT TTGCCGAGGAGCCGTTC TCTGCTGTTGCGCGC 100 58 LT478_RS00500 120517 .. 120543 - -18 -4.62336 ATTGTACCTGAAAAA GGCCGCGCCC GGAGAGA GGGCGCGGCC AGGGAGGGAAGGACC 100 76 LT478_RS00495 119744 .. 119765 - -18.7 -3.95036 AAGCAGCGTAAAGAA GCGGCCCCG GTGA CGGGGCCGC TTTCGTCGTTGCAGC 100 107 LT478_RS00480 NONE LT478_RS00475 NONE LT478_RS00470 NONE LT478_RS00465 NONE LT478_RS00460 NONE LT478_RS00455 NONE LT478_RS00450 106442 .. 106482 - -26.3 -3.33696 GTCTCGTCCAAGCAA GAAAACGCCCCGCAGCTCG TTA CAAGCTGCGGGGCGTTGTC GTTGCTGGTCGAAGC 100 52 LT478_RS00430 102544 .. 102557 - -8.1 -4.55446 GAAGAAATAGGAAAA CCCTC TTAC GAGGG TTTGAAATGCGGTGG 79 38 LT478_RS00395 94862 .. 94872 - -6.8 -3.08642 ATATCATGCAGTCAA TCGC AAT GCGA CAAGAAATTGACCGC 52 106 LT478_RS00390 94688 .. 94715 - -22.8 -5.10665 ACCGAACAAAGAAAA GCGCCCGGAACC AGCT GGTTCCGGGCGC GCTGCGTTTCTGGCG 100 36 LT478_RS00380 NONE LT478_RS00375 89542 .. 89557 - -6 -3.28791 AGCTGCGCCTGAGAA GGCGGC TCGG GCTGCC CGTGGGATACGAGGA 52 443 LT478_RS00365 87999 .. 88028 - -14.3 -3.14132 GCTGGCGGTGATGAA GGAAGGGC-GGCCC TAC GAGCCGGCCCCTCC CCGCAACCACCGCCC 76 172 LT478_RS00355 NONE LT478_RS00350 84857 .. 84875 - -6 -3.61398 CTCTTTGGCGAACAA GGCTCT ATTCATG AGAGCC TCCTTTCTCCACCTG 57 11 LT478_RS00345 84022 .. 84052 - -19.7 -4.00532 GGCGTAAACATCAAA GGGCGGGGACGGC CGAGC GCCGTTCCCGCCC TTTCTCGTGCGGACT 100 44 LT478_RS00330 82489 .. 82518 - -3.6 -5.5112 CTGACCAATAAAAAA TCCGC-ACGTGCTG CTGC CAGT-CGTTGCGGA ATTAGAAGCTGAAAT 88 40 LT478_RS00325 NONE LT478_RS00320 79515 .. 79563 - -15.4 -4.25056 GACTGCAGGAAGAAA GCCGCC-GCCTGC-TCGACGCC GTCAAGT AGCGTCGACGCAGCCCGGCGGC TGCGCTCTTTTCGCC 100 59 LT478_RS00310 77755 .. 77778 - -12.6 -3.20164 GGACATTGAAGCGAA CGAATGTTTC ACGT GAAACATTCG GGTTGCGGAAGAAGC 74 161 LT478_RS00305 75740 .. 75764 - -3.6 -4.07568 TGGGCGGCGTGAAAA CCGA-CGCATCG TGC CAA-GCGCTCGG CGAAAACGGCAGCGT 60 425 LT478_RS00240 57692 .. 57742 - -19.8 -4.8048 TCGCCATACGAAAAA GCCCCGGTCTCCTCAAGCGGTT TGCGATG AAATGCGTGAGGAGACCGGGGC GAGGCGTGGGCCGAG 100 46 LT478_RS00235 56847 .. 56860 - -8.1 -2.53715 CCGACCACGATCAAC CGTCC ATGG GGACG TGGGTCGATATTCTA 52 177 LT478_RS00230 56729 .. 56748 - -12.8 -5.00616 CGGGCGCGCAAAAAA GCGCCCCC GAAA GGGAGCGC TTCTGCATTCGAATG 100 39 LT478_RS00225 53924 .. 53943 - -7 -3.32769 CTTGGAAACCACGAA CGGCGCCG CAAC CACCGCCG GCCTCGTTGAAAAAG 56 90 LT478_RS00085 18939 .. 18961 - -20.6 -4.02719 CCAGTAAACAGCAAA CCCTCCCGGC TCC GCCGGGAGGG TTTTTTTTCTTAAGC 100 148 LT478_RS00040 11791 .. 11801 - -2.4 -3.90744 GGCCGTCCGAAAGAA CCGG GCG CCGT CAGCCTGTCGGCGAT 55 157