locus-tag class description ECH_RS00020 PF17762 HTH domain found in ParB protein ECH_RS00020 PF02195 ParB-like nuclease domain ECH_RS00025 PF01782 RimM N-terminal domain ECH_RS00025 PF05239 PRC-barrel domain ECH_RS00030 PF01746 tRNA (Guanine-1)-methyltransferase ECH_RS00035 PF01245 Ribosomal protein L19 ECH_RS00040 PF02464 Competence-damaged protein ECH_RS00040 PF18146 Damage-inducible protein CinA KH domain ECH_RS00040 PF00994 Probable molybdopterin binding domain ECH_RS00045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ECH_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECH_RS00045 PF03129 Anticodon binding domain ECH_RS00050 PF05198 Translation initiation factor IF-3, N-terminal domain ECH_RS00050 PF00707 Translation initiation factor IF-3, C-terminal domain ECH_RS00055 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ECH_RS00060 PF01027 Inhibitor of apoptosis-promoting Bax1 ECH_RS00070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ECH_RS00070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ECH_RS00080 PF14748 Pyrroline-5-carboxylate reductase dimerisation ECH_RS00080 PF03807 NADP oxidoreductase coenzyme F420-dependent ECH_RS00085 PF12169 DNA polymerase III subunits gamma and tau domain III ECH_RS00085 PF12170 DNA polymerase III tau subunit V interacting with alpha ECH_RS00090 PF02575 YbaB/EbfC DNA-binding family ECH_RS00095 PF01118 Semialdehyde dehydrogenase, NAD binding domain ECH_RS00095 PF02774 Semialdehyde dehydrogenase, dimerisation domain ECH_RS00100 PF02772 S-adenosylmethionine synthetase, central domain ECH_RS00100 PF00438 S-adenosylmethionine synthetase, N-terminal domain ECH_RS00100 PF02773 S-adenosylmethionine synthetase, C-terminal domain ECH_RS00110 PF01494 FAD binding domain ECH_RS00125 PF02091 Glycyl-tRNA synthetase alpha subunit ECH_RS00130 PF02092 Glycyl-tRNA synthetase beta subunit ECH_RS00130 PF05746 DALR anticodon binding domain ECH_RS00135 PF00226 DnaJ domain ECH_RS00135 PF01556 DnaJ C terminal domain ECH_RS00135 PF00684 DnaJ central domain ECH_RS00140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ECH_RS00140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ECH_RS00145 PF02660 Glycerol-3-phosphate acyltransferase ECH_RS00150 PF02075 Crossover junction endodeoxyribonuclease RuvC ECH_RS00155 PF00510 Cytochrome c oxidase subunit III ECH_RS00160 PF01208 Uroporphyrinogen decarboxylase (URO-D) ECH_RS00165 PF03471 Transporter associated domain ECH_RS00165 PF00571 CBS domain ECH_RS00175 PF04860 Phage portal protein ECH_RS00180 PF13847 Methyltransferase domain ECH_RS00185 PF02445 Quinolinate synthetase A protein ECH_RS00195 PF00037 4Fe-4S binding domain ECH_RS00195 PF11953 Domain of unknown function (DUF3470) ECH_RS00205 PF02534 Type IV secretory system Conjugative DNA transfer ECH_RS00210 PF00437 Type II/IV secretion system protein ECH_RS00230 PF00925 GTP cyclohydrolase II ECH_RS00240 PF01209 ubiE/COQ5 methyltransferase family ECH_RS00250 PF01678 Diaminopimelate epimerase ECH_RS00260 PF00162 Phosphoglycerate kinase ECH_RS00265 PF13742 OB-fold nucleic acid binding domain ECH_RS00265 PF02601 Exonuclease VII, large subunit ECH_RS00275 PF00132 Bacterial transferase hexapeptide (six repeats) ECH_RS00275 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ECH_RS00275 PF14602 Hexapeptide repeat of succinyl-transferase ECH_RS00280 PF01926 50S ribosome-binding GTPase ECH_RS00280 PF12631 MnmE helical domain ECH_RS00280 PF10396 GTP-binding protein TrmE N-terminus ECH_RS00285 PF02441 Flavoprotein ECH_RS00285 PF04127 DNA / pantothenate metabolism flavoprotein ECH_RS00290 PF00270 DEAD/DEAH box helicase ECH_RS00290 PF00271 Helicase conserved C-terminal domain ECH_RS00290 PF17191 RecG wedge domain ECH_RS00300 PF01258 Prokaryotic dksA/traR C4-type zinc finger ECH_RS00315 PF01545 Cation efflux family ECH_RS00325 PF01649 Ribosomal protein S20 ECH_RS00330 PF01553 Acyltransferase ECH_RS00335 PF01327 Polypeptide deformylase ECH_RS00340 PF03167 Uracil DNA glycosylase superfamily ECH_RS00345 PF02463 RecF/RecN/SMC N terminal domain ECH_RS00350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECH_RS00350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECH_RS00360 PF00476 DNA polymerase family A ECH_RS00360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ECH_RS00360 PF01367 5'-3' exonuclease, C-terminal SAM fold ECH_RS00365 PF00834 Ribulose-phosphate 3 epimerase family ECH_RS00370 PF02405 Permease MlaE ECH_RS00375 PF00005 ABC transporter ECH_RS00385 PF00348 Polyprenyl synthetase ECH_RS00390 PF00120 Glutamine synthetase, catalytic domain ECH_RS00390 PF03951 Glutamine synthetase, beta-Grasp domain ECH_RS00400 PF00579 tRNA synthetases class I (W and Y) ECH_RS00405 PF00155 Aminotransferase class I and II ECH_RS00410 PF02021 Uncharacterised protein family UPF0102 ECH_RS00415 PF02355 Protein export membrane protein ECH_RS00415 PF07549 SecD/SecF GG Motif ECH_RS00425 PF01791 DeoC/LacD family aldolase ECH_RS00430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ECH_RS00430 PF02817 e3 binding domain ECH_RS00430 PF00364 Biotin-requiring enzyme ECH_RS00500 PF02540 NAD synthase ECH_RS00500 PF00958 GMP synthase C terminal domain ECH_RS00500 PF00117 Glutamine amidotransferase class-I ECH_RS00505 PF00285 Citrate synthase, C-terminal domain ECH_RS00520 PF02687 FtsX-like permease family ECH_RS00520 PF12704 MacB-like periplasmic core domain ECH_RS00540 PF00213 ATP synthase delta (OSCP) subunit ECH_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECH_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECH_RS00545 PF00306 ATP synthase alpha/beta chain, C terminal domain ECH_RS00550 PF01272 Transcription elongation factor, GreA/GreB, C-term ECH_RS00550 PF03449 Transcription elongation factor, N-terminal ECH_RS00555 PF00925 GTP cyclohydrolase II ECH_RS00555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ECH_RS00560 PF01668 SmpB protein ECH_RS00565 PF00133 tRNA synthetases class I (I, L, M and V) ECH_RS00565 PF08264 Anticodon-binding domain of tRNA ECH_RS00570 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ECH_RS00570 PF01578 Cytochrome C assembly protein ECH_RS00575 PF01571 Aminomethyltransferase folate-binding domain ECH_RS00580 PF13537 Glutamine amidotransferase domain ECH_RS00580 PF00156 Phosphoribosyl transferase domain ECH_RS00590 PF01195 Peptidyl-tRNA hydrolase ECH_RS00595 PF14693 Ribosomal protein TL5, C-terminal domain ECH_RS00595 PF01386 Ribosomal L25p family ECH_RS00605 PF01546 Peptidase family M20/M25/M40 ECH_RS00605 PF07687 Peptidase dimerisation domain ECH_RS00610 PF00999 Sodium/hydrogen exchanger family ECH_RS00610 PF02254 TrkA-N domain ECH_RS00620 PF03653 Uncharacterised protein family (UPF0093) ECH_RS00625 PF02780 Transketolase, C-terminal domain ECH_RS00625 PF00364 Biotin-requiring enzyme ECH_RS00625 PF02779 Transketolase, pyrimidine binding domain ECH_RS00640 PF01523 Putative modulator of DNA gyrase ECH_RS00645 PF01926 50S ribosome-binding GTPase ECH_RS00645 PF06071 Protein of unknown function (DUF933) ECH_RS00650 PF02542 YgbB family ECH_RS00655 PF02542 YgbB family ECH_RS00655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ECH_RS00670 PF00731 AIR carboxylase ECH_RS00680 PF00216 Bacterial DNA-binding protein ECH_RS00700 PF00579 tRNA synthetases class I (W and Y) ECH_RS00705 PF01025 GrpE ECH_RS00710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ECH_RS00710 PF01872 RibD C-terminal domain ECH_RS00720 PF00117 Glutamine amidotransferase class-I ECH_RS00720 PF06418 CTP synthase N-terminus ECH_RS00730 PF00589 Phage integrase family ECH_RS00730 PF02899 Phage integrase, N-terminal SAM-like domain ECH_RS00735 PF00005 ABC transporter ECH_RS00740 PF00390 Malic enzyme, N-terminal domain ECH_RS00740 PF01515 Phosphate acetyl/butaryl transferase ECH_RS00740 PF03949 Malic enzyme, NAD binding domain ECH_RS00750 PF00795 Carbon-nitrogen hydrolase ECH_RS00755 PF00361 Proton-conducting membrane transporter ECH_RS00775 PF03477 ATP cone domain ECH_RS00800 PF00886 Ribosomal protein S16 ECH_RS00805 PF08946 Osmosensory transporter coiled coil ECH_RS00805 PF00083 Sugar (and other) transporter ECH_RS00810 PF03966 Trm112p-like protein ECH_RS00820 PF01409 tRNA synthetases class II core domain (F) ECH_RS00820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ECH_RS00825 PF00453 Ribosomal protein L20 ECH_RS00830 PF01632 Ribosomal protein L35 ECH_RS00840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECH_RS00840 PF07498 Rho termination factor, N-terminal domain ECH_RS00840 PF07497 Rho termination factor, RNA-binding domain ECH_RS00845 PF00226 DnaJ domain ECH_RS00845 PF00684 DnaJ central domain ECH_RS00845 PF01556 DnaJ C terminal domain ECH_RS00850 PF01106 NifU-like domain ECH_RS00865 PF05690 Thiazole biosynthesis protein ThiG ECH_RS00875 PF00749 tRNA synthetases class I (E and Q), catalytic domain ECH_RS00905 PF02609 Exonuclease VII small subunit ECH_RS00910 PF04055 Radical SAM superfamily ECH_RS00910 PF00919 Uncharacterized protein family UPF0004 ECH_RS00915 PF00085 Thioredoxin ECH_RS00925 PF00676 Dehydrogenase E1 component ECH_RS00930 PF12146 Serine aminopeptidase, S33 ECH_RS00945 PF00478 IMP dehydrogenase / GMP reductase domain ECH_RS00945 PF00571 CBS domain ECH_RS00950 PF01513 ATP-NAD kinase ECH_RS00960 PF00698 Acyl transferase domain ECH_RS00965 PF02223 Thymidylate kinase ECH_RS00980 PF02556 Preprotein translocase subunit SecB ECH_RS00985 PF13462 Thioredoxin ECH_RS00990 PF05193 Peptidase M16 inactive domain ECH_RS00990 PF00675 Insulinase (Peptidase family M16) ECH_RS01000 PF00677 Lumazine binding domain ECH_RS01030 PF17757 UvrB interaction domain ECH_RS01030 PF02559 CarD-like/TRCF domain ECH_RS01030 PF03461 TRCF domain ECH_RS01030 PF00271 Helicase conserved C-terminal domain ECH_RS01030 PF00270 DEAD/DEAH box helicase ECH_RS01075 PF00075 RNase H ECH_RS01085 PF00696 Amino acid kinase family ECH_RS01090 PF01765 Ribosome recycling factor ECH_RS01120 PF02245 Methylpurine-DNA glycosylase (MPG) ECH_RS01155 PF01259 SAICAR synthetase ECH_RS01160 PF03129 Anticodon binding domain ECH_RS01160 PF13393 Histidyl-tRNA synthetase ECH_RS01170 PF13462 Thioredoxin ECH_RS01175 PF02628 Cytochrome oxidase assembly protein ECH_RS01180 PF00005 ABC transporter ECH_RS01195 PF00313 'Cold-shock' DNA-binding domain ECH_RS01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_RS01200 PF00512 His Kinase A (phospho-acceptor) domain ECH_RS01200 PF00672 HAMP domain ECH_RS01200 PF00989 PAS fold ECH_RS01205 PF00570 HRDC domain ECH_RS01205 PF01612 3'-5' exonuclease ECH_RS01210 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ECH_RS01210 PF12826 Helix-hairpin-helix motif ECH_RS01210 PF01653 NAD-dependent DNA ligase adenylation domain ECH_RS01210 PF00533 BRCA1 C Terminus (BRCT) domain ECH_RS01210 PF03120 NAD-dependent DNA ligase OB-fold domain ECH_RS01215 PF00462 Glutaredoxin ECH_RS01225 PF08534 Redoxin ECH_RS01230 PF18073 Rubredoxin metal binding domain ECH_RS01245 PF01250 Ribosomal protein S6 ECH_RS01250 PF01084 Ribosomal protein S18 ECH_RS01255 PF01281 Ribosomal protein L9, N-terminal domain ECH_RS01255 PF03948 Ribosomal protein L9, C-terminal domain ECH_RS01260 PF00464 Serine hydroxymethyltransferase ECH_RS01270 PF00664 ABC transporter transmembrane region ECH_RS01270 PF00005 ABC transporter ECH_RS01275 PF02910 Fumarate reductase flavoprotein C-term ECH_RS01275 PF00890 FAD binding domain ECH_RS01280 PF13237 4Fe-4S dicluster domain ECH_RS01280 PF13085 2Fe-2S iron-sulfur cluster binding domain ECH_RS01285 PF02511 Thymidylate synthase complementing protein ECH_RS01290 PF07690 Major Facilitator Superfamily ECH_RS01295 PF17864 RuvB AAA lid domain ECH_RS01295 PF05491 RuvB C-terminal winged helix domain ECH_RS01295 PF05496 Holliday junction DNA helicase RuvB P-loop domain ECH_RS01300 PF01330 RuvA N terminal domain ECH_RS01300 PF07499 RuvA, C-terminal domain ECH_RS01305 PF01578 Cytochrome C assembly protein ECH_RS01310 PF00625 Guanylate kinase ECH_RS01315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ECH_RS01315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ECH_RS01330 PF00034 Cytochrome c ECH_RS01335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ECH_RS01335 PF00361 Proton-conducting membrane transporter ECH_RS01335 PF13244 Domain of unknown function (DUF4040) ECH_RS01345 PF00391 PEP-utilising enzyme, mobile domain ECH_RS01345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ECH_RS01345 PF02896 PEP-utilising enzyme, TIM barrel domain ECH_RS01360 PF00464 Serine hydroxymethyltransferase ECH_RS01365 PF00152 tRNA synthetases class II (D, K and N) ECH_RS01365 PF02938 GAD domain ECH_RS01365 PF01336 OB-fold nucleic acid binding domain ECH_RS01370 PF04972 BON domain ECH_RS01375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ECH_RS01375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ECH_RS01385 PF02954 Bacterial regulatory protein, Fis family ECH_RS01385 PF00158 Sigma-54 interaction domain ECH_RS01385 PF00072 Response regulator receiver domain ECH_RS01390 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ECH_RS01390 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ECH_RS01395 PF00589 Phage integrase family ECH_RS01395 PF02899 Phage integrase, N-terminal SAM-like domain ECH_RS01400 PF00586 AIR synthase related protein, N-terminal domain ECH_RS01400 PF02769 AIR synthase related protein, C-terminal domain ECH_RS01420 PF01435 Peptidase family M48 ECH_RS01430 PF00809 Pterin binding enzyme ECH_RS01430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ECH_RS01435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ECH_RS01435 PF02769 AIR synthase related protein, C-terminal domain ECH_RS01435 PF00586 AIR synthase related protein, N-terminal domain ECH_RS01440 PF06968 Biotin and Thiamin Synthesis associated domain ECH_RS01440 PF04055 Radical SAM superfamily ECH_RS01460 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ECH_RS01465 PF01134 Glucose inhibited division protein A ECH_RS01465 PF13932 GidA associated domain ECH_RS01475 PF04002 RadC-like JAB domain ECH_RS01480 PF00166 Chaperonin 10 Kd subunit ECH_RS01485 PF00118 TCP-1/cpn60 chaperonin family ECH_RS01490 PF00106 short chain dehydrogenase ECH_RS01495 PF02861 Clp amino terminal domain, pathogenicity island component ECH_RS01495 PF17871 AAA lid domain ECH_RS01495 PF07724 AAA domain (Cdc48 subfamily) ECH_RS01495 PF10431 C-terminal, D2-small domain, of ClpB protein ECH_RS01495 PF00004 ATPase family associated with various cellular activities (AAA) ECH_RS01500 PF00775 Dioxygenase ECH_RS01505 PF00883 Cytosol aminopeptidase family, catalytic domain ECH_RS01505 PF02789 Cytosol aminopeptidase family, N-terminal domain ECH_RS01510 PF00551 Formyl transferase ECH_RS01515 PF03099 Biotin/lipoate A/B protein ligase family ECH_RS01520 PF01979 Amidohydrolase family ECH_RS01525 PF04127 DNA / pantothenate metabolism flavoprotein ECH_RS01525 PF02441 Flavoprotein ECH_RS01530 PF10415 Fumarase C C-terminus ECH_RS01530 PF00206 Lyase ECH_RS01540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ECH_RS01540 PF02142 MGS-like domain ECH_RS01540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ECH_RS01550 PF00809 Pterin binding enzyme ECH_RS01555 PF00005 ABC transporter ECH_RS01555 PF00664 ABC transporter transmembrane region ECH_RS01560 PF00107 Zinc-binding dehydrogenase ECH_RS01560 PF08240 Alcohol dehydrogenase GroES-like domain ECH_RS01565 PF13361 UvrD-like helicase C-terminal domain ECH_RS01565 PF00580 UvrD/REP helicase N-terminal domain ECH_RS01565 PF12705 PD-(D/E)XK nuclease superfamily ECH_RS01595 PF00762 Ferrochelatase ECH_RS01625 PF00216 Bacterial DNA-binding protein ECH_RS01630 PF01343 Peptidase family S49 ECH_RS01635 PF00575 S1 RNA binding domain ECH_RS01640 PF02224 Cytidylate kinase ECH_RS01645 PF08032 RNA 2'-O ribose methyltransferase substrate binding ECH_RS01645 PF00588 SpoU rRNA Methylase family ECH_RS01660 PF00009 Elongation factor Tu GTP binding domain ECH_RS01660 PF03143 Elongation factor Tu C-terminal domain ECH_RS01660 PF03144 Elongation factor Tu domain 2 ECH_RS01665 PF00338 Ribosomal protein S10p/S20e ECH_RS01670 PF00297 Ribosomal protein L3 ECH_RS01675 PF00573 Ribosomal protein L4/L1 family ECH_RS01680 PF00276 Ribosomal protein L23 ECH_RS01685 PF00181 Ribosomal Proteins L2, RNA binding domain ECH_RS01685 PF03947 Ribosomal Proteins L2, C-terminal domain ECH_RS01690 PF00203 Ribosomal protein S19 ECH_RS01695 PF00237 Ribosomal protein L22p/L17e ECH_RS01700 PF00189 Ribosomal protein S3, C-terminal domain ECH_RS01700 PF07650 KH domain ECH_RS01705 PF00252 Ribosomal protein L16p/L10e ECH_RS01710 PF00831 Ribosomal L29 protein ECH_RS01715 PF00366 Ribosomal protein S17 ECH_RS01720 PF00238 Ribosomal protein L14p/L23e ECH_RS01725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ECH_RS01725 PF00467 KOW motif ECH_RS01730 PF00673 ribosomal L5P family C-terminus ECH_RS01730 PF00281 Ribosomal protein L5 ECH_RS01735 PF00253 Ribosomal protein S14p/S29e ECH_RS01740 PF00410 Ribosomal protein S8 ECH_RS01745 PF00347 Ribosomal protein L6 ECH_RS01750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ECH_RS01755 PF00333 Ribosomal protein S5, N-terminal domain ECH_RS01755 PF03719 Ribosomal protein S5, C-terminal domain ECH_RS01760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ECH_RS01765 PF00344 SecY translocase ECH_RS01775 PF00416 Ribosomal protein S13/S18 ECH_RS01780 PF00411 Ribosomal protein S11 ECH_RS01785 PF01000 RNA polymerase Rpb3/RpoA insert domain ECH_RS01785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ECH_RS01785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ECH_RS01790 PF01196 Ribosomal protein L17 ECH_RS01795 PF03483 B3/4 domain ECH_RS01795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ECH_RS01795 PF03147 Ferredoxin-fold anticodon binding domain ECH_RS01795 PF03484 tRNA synthetase B5 domain ECH_RS01795 PF01588 Putative tRNA binding domain ECH_RS01800 PF03772 Competence protein ECH_RS01800 PF00753 Metallo-beta-lactamase superfamily ECH_RS01805 PF01235 Sodium:alanine symporter family ECH_RS01810 PF00825 Ribonuclease P ECH_RS01815 PF01040 UbiA prenyltransferase family ECH_RS01820 PF01613 Flavin reductase like domain ECH_RS01825 PF05173 Dihydrodipicolinate reductase, C-terminus ECH_RS01825 PF01113 Dihydrodipicolinate reductase, N-terminus ECH_RS01830 PF00005 ABC transporter ECH_RS01835 PF01702 Queuine tRNA-ribosyltransferase ECH_RS01840 PF01783 Ribosomal L32p protein family ECH_RS01845 PF02504 Fatty acid synthesis protein ECH_RS01850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ECH_RS01850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ECH_RS01855 PF14437 MafB19-like deaminase ECH_RS01865 PF00772 DnaB-like helicase N terminal domain ECH_RS01865 PF03796 DnaB-like helicase C terminal domain ECH_RS01870 PF01266 FAD dependent oxidoreductase ECH_RS01880 PF00348 Polyprenyl synthetase ECH_RS01890 PF02867 Ribonucleotide reductase, barrel domain ECH_RS01890 PF08343 Ribonucleotide reductase N-terminal ECH_RS01890 PF00317 Ribonucleotide reductase, all-alpha domain ECH_RS01895 PF03652 Holliday junction resolvase ECH_RS01900 PF00709 Adenylosuccinate synthetase ECH_RS01905 PF00691 OmpA family ECH_RS01915 PF02780 Transketolase, C-terminal domain ECH_RS01915 PF02779 Transketolase, pyrimidine binding domain ECH_RS01915 PF00456 Transketolase, thiamine diphosphate binding domain ECH_RS01925 PF03334 Na+/H+ antiporter subunit ECH_RS01935 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ECH_RS01945 PF10150 Ribonuclease E/G family ECH_RS01945 PF12111 Polyribonucleotide phosphorylase C terminal ECH_RS01945 PF00575 S1 RNA binding domain ECH_RS01950 PF00012 Hsp70 protein ECH_RS01955 PF03364 Polyketide cyclase / dehydrase and lipid transport ECH_RS01960 PF00361 Proton-conducting membrane transporter ECH_RS01965 PF02978 Signal peptide binding domain ECH_RS01965 PF02881 SRP54-type protein, helical bundle domain ECH_RS01965 PF00448 SRP54-type protein, GTPase domain ECH_RS01970 PF07650 KH domain ECH_RS01970 PF01926 50S ribosome-binding GTPase ECH_RS01985 PF00557 Metallopeptidase family M24 ECH_RS01985 PF01321 Creatinase/Prolidase N-terminal domain ECH_RS02000 PF17764 3′ DNA-binding domain (3′BD) ECH_RS02000 PF00271 Helicase conserved C-terminal domain ECH_RS02000 PF00270 DEAD/DEAH box helicase ECH_RS02000 PF18074 Primosomal protein N C-terminal domain ECH_RS02000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ECH_RS02005 PF00830 Ribosomal L28 family ECH_RS02010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECH_RS02010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECH_RS02015 PF00849 RNA pseudouridylate synthase ECH_RS02020 PF18140 Propionyl-coenzyme A carboxylase BT domain ECH_RS02020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ECH_RS02020 PF00289 Biotin carboxylase, N-terminal domain ECH_RS02020 PF02785 Biotin carboxylase C-terminal domain ECH_RS02020 PF00364 Biotin-requiring enzyme ECH_RS02035 PF04055 Radical SAM superfamily ECH_RS02035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ECH_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component ECH_RS02050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ECH_RS02050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ECH_RS02060 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ECH_RS02065 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ECH_RS02070 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ECH_RS02075 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ECH_RS02080 PF04610 TrbL/VirB6 plasmid conjugal transfer protein ECH_RS02090 PF00692 dUTPase ECH_RS02095 PF02401 LytB protein ECH_RS02100 PF00117 Glutamine amidotransferase class-I ECH_RS02100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ECH_RS02105 PF01926 50S ribosome-binding GTPase ECH_RS02105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ECH_RS02110 PF01676 Metalloenzyme superfamily ECH_RS02110 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ECH_RS02120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECH_RS02120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECH_RS02130 PF01176 Translation initiation factor 1A / IF-1 ECH_RS02135 PF02545 Maf-like protein ECH_RS02140 PF00318 Ribosomal protein S2 ECH_RS02145 PF00889 Elongation factor TS ECH_RS02150 PF04430 Protein of unknown function (DUF498/DUF598) ECH_RS02155 PF00950 ABC 3 transport family ECH_RS02165 PF00355 Rieske [2Fe-2S] domain ECH_RS02165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ECH_RS02170 PF00032 Cytochrome b(C-terminal)/b6/petD ECH_RS02170 PF00033 Cytochrome b/b6/petB ECH_RS02175 PF02167 Cytochrome C1 family ECH_RS02200 PF02769 AIR synthase related protein, C-terminal domain ECH_RS02200 PF00586 AIR synthase related protein, N-terminal domain ECH_RS02215 PF13335 Magnesium chelatase, subunit ChlI C-terminal ECH_RS02215 PF01078 Magnesium chelatase, subunit ChlI ECH_RS02220 PF01728 FtsJ-like methyltransferase ECH_RS02235 PF11967 Recombination protein O N terminal ECH_RS02235 PF02565 Recombination protein O C terminal ECH_RS02240 PF03485 Arginyl tRNA synthetase N terminal domain ECH_RS02240 PF00750 tRNA synthetases class I (R) ECH_RS02240 PF05746 DALR anticodon binding domain ECH_RS02245 PF08264 Anticodon-binding domain of tRNA ECH_RS02245 PF00133 tRNA synthetases class I (I, L, M and V) ECH_RS02250 PF00578 AhpC/TSA family ECH_RS02255 PF04452 RNA methyltransferase ECH_RS02265 PF01795 MraW methylase family ECH_RS02270 PF01926 50S ribosome-binding GTPase ECH_RS02270 PF01018 GTP1/OBG ECH_RS02275 PF03952 Enolase, N-terminal domain ECH_RS02275 PF00113 Enolase, C-terminal TIM barrel domain ECH_RS02280 PF00829 Ribosomal prokaryotic L21 protein ECH_RS02285 PF01016 Ribosomal L27 protein ECH_RS02295 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ECH_RS02295 PF10531 SLBB domain ECH_RS02295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ECH_RS02310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ECH_RS02315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ECH_RS02320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ECH_RS02320 PF00361 Proton-conducting membrane transporter ECH_RS02325 PF00361 Proton-conducting membrane transporter ECH_RS02325 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ECH_RS02335 PF13288 DXP reductoisomerase C-terminal domain ECH_RS02335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ECH_RS02335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ECH_RS02345 PF04551 GcpE protein ECH_RS02350 PF00902 Sec-independent protein translocase protein (TatC) ECH_RS02355 PF00873 AcrB/AcrD/AcrF family ECH_RS02360 PF00575 S1 RNA binding domain ECH_RS02360 PF08529 NusA N-terminal domain ECH_RS02360 PF13184 NusA-like KH domain ECH_RS02365 PF11987 Translation-initiation factor 2 ECH_RS02365 PF00009 Elongation factor Tu GTP binding domain ECH_RS02365 PF04760 Translation initiation factor IF-2, N-terminal region ECH_RS02370 PF02033 Ribosome-binding factor A ECH_RS02375 PF03741 Integral membrane protein TerC family ECH_RS02380 PF10431 C-terminal, D2-small domain, of ClpB protein ECH_RS02380 PF02861 Clp amino terminal domain, pathogenicity island component ECH_RS02380 PF17871 AAA lid domain ECH_RS02380 PF07724 AAA domain (Cdc48 subfamily) ECH_RS02380 PF00004 ATPase family associated with various cellular activities (AAA) ECH_RS02410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECH_RS02410 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECH_RS02420 PF00923 Transaldolase/Fructose-6-phosphate aldolase ECH_RS02425 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) ECH_RS02430 PF02646 RmuC family ECH_RS02445 PF00375 Sodium:dicarboxylate symporter family ECH_RS02450 PF03462 PCRF domain ECH_RS02450 PF00472 RF-1 domain ECH_RS02455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECH_RS02455 PF02403 Seryl-tRNA synthetase N-terminal domain ECH_RS02475 PF01218 Coproporphyrinogen III oxidase ECH_RS02485 PF00696 Amino acid kinase family ECH_RS02490 PF01926 50S ribosome-binding GTPase ECH_RS02495 PF03462 PCRF domain ECH_RS02495 PF00472 RF-1 domain ECH_RS02500 PF01039 Carboxyl transferase domain ECH_RS02515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ECH_RS02515 PF06827 Zinc finger found in FPG and IleRS ECH_RS02515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ECH_RS02525 PF00749 tRNA synthetases class I (E and Q), catalytic domain ECH_RS02570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ECH_RS02575 PF00146 NADH dehydrogenase ECH_RS02580 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ECH_RS02580 PF00384 Molybdopterin oxidoreductase ECH_RS02580 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ECH_RS02590 PF00986 DNA gyrase B subunit, carboxyl terminus ECH_RS02590 PF01751 Toprim domain ECH_RS02590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_RS02590 PF00204 DNA gyrase B ECH_RS02595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECH_RS02595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECH_RS02600 PF01416 tRNA pseudouridine synthase ECH_RS02605 PF01648 4'-phosphopantetheinyl transferase superfamily ECH_RS02615 PF01921 tRNA synthetases class I (K) ECH_RS02620 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ECH_RS02625 PF00266 Aminotransferase class-V ECH_RS02630 PF00266 Aminotransferase class-V ECH_RS02635 PF01592 NifU-like N terminal domain ECH_RS02640 PF01521 Iron-sulphur cluster biosynthesis ECH_RS02645 PF00226 DnaJ domain ECH_RS02645 PF07743 HSCB C-terminal oligomerisation domain ECH_RS02650 PF00012 Hsp70 protein ECH_RS02655 PF00111 2Fe-2S iron-sulfur cluster binding domain ECH_RS02665 PF03918 Cytochrome C biogenesis protein ECH_RS02670 PF08241 Methyltransferase domain ECH_RS02675 PF02502 Ribose/Galactose Isomerase ECH_RS02690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ECH_RS02690 PF00056 lactate/malate dehydrogenase, NAD binding domain ECH_RS02705 PF00814 Glycoprotease family ECH_RS02715 PF00121 Triosephosphate isomerase ECH_RS02725 PF00398 Ribosomal RNA adenine dimethylase ECH_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECH_RS02735 PF01523 Putative modulator of DNA gyrase ECH_RS02740 PF01227 GTP cyclohydrolase I ECH_RS02745 PF00231 ATP synthase ECH_RS02760 PF04545 Sigma-70, region 4 ECH_RS02760 PF04542 Sigma-70 region 2 ECH_RS02760 PF00140 Sigma-70 factor, region 1.2 ECH_RS02765 PF00444 Ribosomal protein L36 ECH_RS02810 PF00202 Aminotransferase class-III ECH_RS02815 PF00171 Aldehyde dehydrogenase family ECH_RS02815 PF01619 Proline dehydrogenase ECH_RS02815 PF14850 DNA-binding domain of Proline dehydrogenase ECH_RS02815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ECH_RS02835 PF03372 Endonuclease/Exonuclease/phosphatase family ECH_RS02840 PF01960 ArgJ family ECH_RS02855 PF00764 Arginosuccinate synthase ECH_RS02875 PF01966 HD domain ECH_RS02875 PF13286 Phosphohydrolase-associated domain ECH_RS02880 PF01521 Iron-sulphur cluster biosynthesis ECH_RS02885 PF10502 Signal peptidase, peptidase S26 ECH_RS02890 PF12838 4Fe-4S dicluster domain ECH_RS02900 PF00679 Elongation factor G C-terminus ECH_RS02900 PF00009 Elongation factor Tu GTP binding domain ECH_RS02900 PF03144 Elongation factor Tu domain 2 ECH_RS02930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ECH_RS02930 PF03900 Porphobilinogen deaminase, C-terminal domain ECH_RS02935 PF08245 Mur ligase middle domain ECH_RS02935 PF02875 Mur ligase family, glutamate ligase domain ECH_RS02940 PF01425 Amidase ECH_RS02945 PF01709 Transcriptional regulator ECH_RS02950 PF00472 RF-1 domain ECH_RS02950 PF03462 PCRF domain ECH_RS03005 PF14492 Elongation Factor G, domain II ECH_RS03005 PF03144 Elongation factor Tu domain 2 ECH_RS03005 PF00009 Elongation factor Tu GTP binding domain ECH_RS03005 PF00679 Elongation factor G C-terminus ECH_RS03005 PF06421 GTP-binding protein LepA C-terminus ECH_RS03010 PF08241 Methyltransferase domain ECH_RS03015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ECH_RS03015 PF01138 3' exoribonuclease family, domain 1 ECH_RS03015 PF00013 KH domain ECH_RS03015 PF03725 3' exoribonuclease family, domain 2 ECH_RS03015 PF00575 S1 RNA binding domain ECH_RS03020 PF00312 Ribosomal protein S15 ECH_RS03025 PF16198 tRNA pseudouridylate synthase B C-terminal domain ECH_RS03025 PF01509 TruB family pseudouridylate synthase (N terminal domain) ECH_RS03035 PF00814 Glycoprotease family ECH_RS03040 PF09312 SurA N-terminal domain ECH_RS03040 PF00639 PPIC-type PPIASE domain ECH_RS03045 PF00155 Aminotransferase class I and II ECH_RS03050 PF10417 C-terminal domain of 1-Cys peroxiredoxin ECH_RS03050 PF00578 AhpC/TSA family ECH_RS03055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECH_RS03060 PF01467 Cytidylyltransferase-like ECH_RS03075 PF03129 Anticodon binding domain ECH_RS03075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECH_RS03080 PF01648 4'-phosphopantetheinyl transferase superfamily ECH_RS03105 PF13368 Topoisomerase C-terminal repeat ECH_RS03105 PF01396 Topoisomerase DNA binding C4 zinc finger ECH_RS03105 PF01131 DNA topoisomerase ECH_RS03105 PF01751 Toprim domain ECH_RS03110 PF01256 Carbohydrate kinase ECH_RS03110 PF03853 YjeF-related protein N-terminus ECH_RS03125 PF08448 PAS fold ECH_RS03125 PF00512 His Kinase A (phospho-acceptor) domain ECH_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_RS03125 PF00072 Response regulator receiver domain ECH_RS03125 PF13188 PAS domain ECH_RS03135 PF08544 GHMP kinases C terminal ECH_RS03140 PF01207 Dihydrouridine synthase (Dus) ECH_RS03145 PF04546 Sigma-70, non-essential region ECH_RS03145 PF03979 Sigma-70 factor, region 1.1 ECH_RS03145 PF00140 Sigma-70 factor, region 1.2 ECH_RS03145 PF04542 Sigma-70 region 2 ECH_RS03145 PF04539 Sigma-70 region 3 ECH_RS03145 PF04545 Sigma-70, region 4 ECH_RS03150 PF08275 DNA primase catalytic core, N-terminal domain ECH_RS03150 PF01807 CHC2 zinc finger ECH_RS03175 PF00268 Ribonucleotide reductase, small chain ECH_RS03185 PF01406 tRNA synthetases class I (C) catalytic domain ECH_RS03185 PF09190 DALR domain ECH_RS03190 PF06055 Exopolysaccharide synthesis, ExoD ECH_RS03195 PF05088 Bacterial NAD-glutamate dehydrogenase ECH_RS03205 PF00990 Diguanylate cyclase, GGDEF domain ECH_RS03205 PF00072 Response regulator receiver domain ECH_RS03210 PF00849 RNA pseudouridylate synthase ECH_RS03210 PF01479 S4 domain ECH_RS03220 PF01132 Elongation factor P (EF-P) OB domain ECH_RS03220 PF08207 Elongation factor P (EF-P) KOW-like domain ECH_RS03220 PF09285 Elongation factor P, C-terminal ECH_RS03225 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECH_RS03230 PF02666 Phosphatidylserine decarboxylase ECH_RS03235 PF01066 CDP-alcohol phosphatidyltransferase ECH_RS03240 PF01235 Sodium:alanine symporter family ECH_RS03245 PF14849 YidC periplasmic domain ECH_RS03245 PF02096 60Kd inner membrane protein ECH_RS03250 PF00885 6,7-dimethyl-8-ribityllumazine synthase ECH_RS03260 PF17760 UvrA interaction domain ECH_RS03260 PF17755 UvrA DNA-binding domain ECH_RS03265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ECH_RS03270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ECH_RS03275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ECH_RS03280 PF03100 CcmE ECH_RS03285 PF01975 Survival protein SurE ECH_RS03290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ECH_RS03295 PF01026 TatD related DNase ECH_RS03300 PF09334 tRNA synthetases class I (M) ECH_RS03300 PF13603 Leucyl-tRNA synthetase, Domain 2 ECH_RS03300 PF00133 tRNA synthetases class I (I, L, M and V) ECH_RS03300 PF08264 Anticodon-binding domain of tRNA ECH_RS03310 PF01192 RNA polymerase Rpb6 ECH_RS03320 PF01964 Radical SAM ThiC family ECH_RS03320 PF13667 ThiC-associated domain ECH_RS03325 PF01121 Dephospho-CoA kinase ECH_RS03330 PF01300 Telomere recombination ECH_RS03345 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ECH_RS03350 PF01467 Cytidylyltransferase-like ECH_RS03360 PF00308 Bacterial dnaA protein ECH_RS03360 PF08299 Bacterial dnaA protein helix-turn-helix ECH_RS03360 PF11638 DnaA N-terminal domain ECH_RS03365 PF00308 Bacterial dnaA protein ECH_RS03365 PF08299 Bacterial dnaA protein helix-turn-helix ECH_RS03365 PF11638 DnaA N-terminal domain ECH_RS03380 PF02637 GatB domain ECH_RS03380 PF02934 GatB/GatE catalytic domain ECH_RS03390 PF00436 Single-strand binding protein family ECH_RS03395 PF07690 Major Facilitator Superfamily ECH_RS03400 PF07690 Major Facilitator Superfamily ECH_RS03410 PF00490 Delta-aminolevulinic acid dehydratase ECH_RS03415 PF00795 Carbon-nitrogen hydrolase ECH_RS03415 PF02540 NAD synthase ECH_RS03420 PF00488 MutS domain V ECH_RS03420 PF05188 MutS domain II ECH_RS03420 PF05190 MutS family domain IV ECH_RS03420 PF05192 MutS domain III ECH_RS03420 PF01624 MutS domain I ECH_RS03430 PF01230 HIT domain ECH_RS03435 PF00701 Dihydrodipicolinate synthetase family ECH_RS03445 PF16078 2-oxoglutarate dehydrogenase N-terminus ECH_RS03445 PF00676 Dehydrogenase E1 component ECH_RS03445 PF02779 Transketolase, pyrimidine binding domain ECH_RS03445 PF16870 2-oxoglutarate dehydrogenase C-terminal ECH_RS03460 PF01938 TRAM domain ECH_RS03460 PF00919 Uncharacterized protein family UPF0004 ECH_RS03460 PF04055 Radical SAM superfamily ECH_RS03470 PF03109 ABC1 family ECH_RS03475 PF00005 ABC transporter ECH_RS03480 PF01297 Zinc-uptake complex component A periplasmic ECH_RS03485 PF13662 Toprim domain ECH_RS03485 PF02132 RecR protein ECH_RS03490 PF02416 mttA/Hcf106 family ECH_RS03495 PF08402 TOBE domain ECH_RS03495 PF00005 ABC transporter ECH_RS03505 PF02798 Glutathione S-transferase, N-terminal domain ECH_RS03505 PF00043 Glutathione S-transferase, C-terminal domain ECH_RS03525 PF10397 Adenylosuccinate lyase C-terminus ECH_RS03525 PF00206 Lyase ECH_RS03530 PF00183 Hsp90 protein ECH_RS03540 PF00633 Helix-hairpin-helix motif ECH_RS03540 PF10576 Iron-sulfur binding domain of endonuclease III ECH_RS03540 PF00730 HhH-GPD superfamily base excision DNA repair protein ECH_RS03545 PF00521 DNA gyrase/topoisomerase IV, subunit A ECH_RS03545 PF03989 DNA gyrase C-terminal domain, beta-propeller ECH_RS03550 PF13361 UvrD-like helicase C-terminal domain ECH_RS03550 PF00580 UvrD/REP helicase N-terminal domain ECH_RS03585 PF03232 Ubiquinone biosynthesis protein COQ7 ECH_RS03600 PF00471 Ribosomal protein L33 ECH_RS03620 PF00550 Phosphopantetheine attachment site ECH_RS03625 PF02801 Beta-ketoacyl synthase, C-terminal domain ECH_RS03625 PF00109 Beta-ketoacyl synthase, N-terminal domain ECH_RS03630 PF02481 DNA recombination-mediator protein A ECH_RS03630 PF17782 DprA winged helix domain ECH_RS03635 PF01119 DNA mismatch repair protein, C-terminal domain ECH_RS03635 PF08676 MutL C terminal dimerisation domain ECH_RS03640 PF00989 PAS fold ECH_RS03640 PF00512 His Kinase A (phospho-acceptor) domain ECH_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECH_RS03645 PF00202 Aminotransferase class-III ECH_RS03655 PF17854 FtsK alpha domain ECH_RS03655 PF09397 Ftsk gamma domain ECH_RS03655 PF01580 FtsK/SpoIIIE family ECH_RS03655 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ECH_RS03660 PF02325 YGGT family ECH_RS03665 PF03471 Transporter associated domain ECH_RS03665 PF01595 Cyclin M transmembrane N-terminal domain ECH_RS03665 PF00571 CBS domain ECH_RS03670 PF02581 Thiamine monophosphate synthase ECH_RS03675 PF03618 Kinase/pyrophosphorylase ECH_RS03680 PF00581 Rhodanese-like domain ECH_RS03680 PF17773 UPF0176 acylphosphatase like domain ECH_RS03685 PF02911 Formyl transferase, C-terminal domain ECH_RS03685 PF00551 Formyl transferase ECH_RS03695 PF00004 ATPase family associated with various cellular activities (AAA) ECH_RS03695 PF05362 Lon protease (S16) C-terminal proteolytic domain ECH_RS03695 PF02190 ATP-dependent protease La (LON) substrate-binding domain ECH_RS03700 PF06689 ClpX C4-type zinc finger ECH_RS03700 PF07724 AAA domain (Cdc48 subfamily) ECH_RS03700 PF10431 C-terminal, D2-small domain, of ClpB protein ECH_RS03705 PF00574 Clp protease ECH_RS03710 PF05698 Bacterial trigger factor protein (TF) C-terminus ECH_RS03710 PF05697 Bacterial trigger factor protein (TF) ECH_RS03710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECH_RS03745 PF01594 AI-2E family transporter ECH_RS03755 PF01479 S4 domain ECH_RS03755 PF00163 Ribosomal protein S4/S9 N-terminal domain ECH_RS03765 PF02581 Thiamine monophosphate synthase ECH_RS03765 PF08543 Phosphomethylpyrimidine kinase ECH_RS03775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ECH_RS03780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ECH_RS03790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ECH_RS03795 PF14579 Helix-hairpin-helix motif ECH_RS03795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ECH_RS03795 PF07733 Bacterial DNA polymerase III alpha NTPase domain ECH_RS03795 PF02811 PHP domain ECH_RS03810 PF01722 BolA-like protein ECH_RS03815 PF01243 Pyridoxamine 5'-phosphate oxidase ECH_RS03815 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ECH_RS03830 PF14698 Argininosuccinate lyase C-terminal ECH_RS03830 PF00206 Lyase ECH_RS03835 PF01327 Polypeptide deformylase ECH_RS03840 PF01180 Dihydroorotate dehydrogenase ECH_RS03845 PF03309 Type III pantothenate kinase ECH_RS03865 PF01351 Ribonuclease HII ECH_RS03880 PF00155 Aminotransferase class I and II ECH_RS03885 PF04997 RNA polymerase Rpb1, domain 1 ECH_RS03885 PF00623 RNA polymerase Rpb1, domain 2 ECH_RS03885 PF04983 RNA polymerase Rpb1, domain 3 ECH_RS03885 PF05000 RNA polymerase Rpb1, domain 4 ECH_RS03885 PF04998 RNA polymerase Rpb1, domain 5 ECH_RS03890 PF04563 RNA polymerase beta subunit ECH_RS03890 PF04560 RNA polymerase Rpb2, domain 7 ECH_RS03890 PF10385 RNA polymerase beta subunit external 1 domain ECH_RS03890 PF04565 RNA polymerase Rpb2, domain 3 ECH_RS03890 PF04561 RNA polymerase Rpb2, domain 2 ECH_RS03890 PF00562 RNA polymerase Rpb2, domain 6 ECH_RS03895 PF00542 Ribosomal protein L7/L12 C-terminal domain ECH_RS03900 PF00466 Ribosomal protein L10 ECH_RS03905 PF00687 Ribosomal protein L1p/L10e family ECH_RS03910 PF00298 Ribosomal protein L11, RNA binding domain ECH_RS03910 PF03946 Ribosomal protein L11, N-terminal domain ECH_RS03915 PF00467 KOW motif ECH_RS03915 PF02357 Transcription termination factor nusG ECH_RS03930 PF00009 Elongation factor Tu GTP binding domain ECH_RS03930 PF03144 Elongation factor Tu domain 2 ECH_RS03930 PF03143 Elongation factor Tu C-terminal domain ECH_RS03935 PF00009 Elongation factor Tu GTP binding domain ECH_RS03935 PF03764 Elongation factor G, domain IV ECH_RS03935 PF14492 Elongation Factor G, domain II ECH_RS03935 PF00679 Elongation factor G C-terminus ECH_RS03935 PF03144 Elongation factor Tu domain 2 ECH_RS03940 PF00177 Ribosomal protein S7p/S5e ECH_RS03945 PF00164 Ribosomal protein S12/S23 ECH_RS03960 PF17770 Ribonuclease J C-terminal domain ECH_RS03960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ECH_RS03960 PF12706 Beta-lactamase superfamily domain ECH_RS03970 PF00529 HlyD membrane-fusion protein of T1SS ECH_RS03970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECH_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component ECH_RS03985 PF03060 Nitronate monooxygenase ECH_RS04000 PF01165 Ribosomal protein S21 ECH_RS04005 PF08442 ATP-grasp domain ECH_RS04005 PF00549 CoA-ligase ECH_RS04010 PF00549 CoA-ligase ECH_RS04010 PF02629 CoA binding domain ECH_RS04015 PF01411 tRNA synthetases class II (A) ECH_RS04015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ECH_RS04020 PF00528 Binding-protein-dependent transport system inner membrane component ECH_RS04025 PF03951 Glutamine synthetase, beta-Grasp domain ECH_RS04025 PF00120 Glutamine synthetase, catalytic domain ECH_RS04060 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECH_RS04060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECH_RS04065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECH_RS04065 PF07497 Rho termination factor, RNA-binding domain ECH_RS04065 PF07498 Rho termination factor, N-terminal domain ECH_RS04070 PF00227 Proteasome subunit ECH_RS04075 PF10431 C-terminal, D2-small domain, of ClpB protein ECH_RS04075 PF07724 AAA domain (Cdc48 subfamily) ECH_RS04075 PF00004 ATPase family associated with various cellular activities (AAA) ECH_RS04080 PF01209 ubiE/COQ5 methyltransferase family ECH_RS04085 PF09334 tRNA synthetases class I (M) ECH_RS04090 PF00696 Amino acid kinase family ECH_RS04090 PF13840 ACT domain ECH_RS04090 PF01842 ACT domain ECH_RS04095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ECH_RS04095 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ECH_RS04100 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECH_RS04105 PF01040 UbiA prenyltransferase family ECH_RS04110 PF13525 Outer membrane lipoprotein ECH_RS04115 PF02844 Phosphoribosylglycinamide synthetase, N domain ECH_RS04115 PF02843 Phosphoribosylglycinamide synthetase, C domain ECH_RS04115 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ECH_RS04120 PF02699 Preprotein translocase subunit ECH_RS04125 PF02767 DNA polymerase III beta subunit, central domain ECH_RS04125 PF00712 DNA polymerase III beta subunit, N-terminal domain ECH_RS04125 PF02768 DNA polymerase III beta subunit, C-terminal domain ECH_RS04130 PF02768 DNA polymerase III beta subunit, C-terminal domain ECH_RS04130 PF02767 DNA polymerase III beta subunit, central domain ECH_RS04130 PF00712 DNA polymerase III beta subunit, N-terminal domain ECH_RS04140 PF00072 Response regulator receiver domain ECH_RS04140 PF00486 Transcriptional regulatory protein, C terminal ECH_RS04150 PF00719 Inorganic pyrophosphatase ECH_RS04155 PF01118 Semialdehyde dehydrogenase, NAD binding domain ECH_RS04155 PF02774 Semialdehyde dehydrogenase, dimerisation domain ECH_RS04160 PF00380 Ribosomal protein S9/S16 ECH_RS04165 PF00572 Ribosomal protein L13 ECH_RS04180 PF10609 NUBPL iron-transfer P-loop NTPase ECH_RS04180 PF01883 Iron-sulfur cluster assembly protein ECH_RS04185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ECH_RS04185 PF14572 Phosphoribosyl synthetase-associated domain ECH_RS04190 PF02686 Glu-tRNAGln amidotransferase C subunit ECH_RS04195 PF00694 Aconitase C-terminal domain ECH_RS04195 PF00330 Aconitase family (aconitate hydratase) ECH_RS04200 PF04379 ApaG domain ECH_RS04205 PF02222 ATP-grasp domain ECH_RS04205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ECH_RS04235 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ECH_RS04260 PF01145 SPFH domain / Band 7 family ECH_RS04265 PF01145 SPFH domain / Band 7 family ECH_RS04270 PF17820 PDZ domain ECH_RS04270 PF13180 PDZ domain ECH_RS04280 PF00035 Double-stranded RNA binding motif ECH_RS04280 PF14622 Ribonuclease-III-like ECH_RS04285 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ECH_RS04290 PF05193 Peptidase M16 inactive domain ECH_RS04290 PF00675 Insulinase (Peptidase family M16) ECH_RS04305 PF01252 Signal peptidase (SPase) II ECH_RS04310 PF01687 Riboflavin kinase ECH_RS04310 PF06574 FAD synthetase ECH_RS04315 PF00462 Glutaredoxin ECH_RS04320 PF17827 PrmC N-terminal domain ECH_RS04320 PF13847 Methyltransferase domain ECH_RS04325 PF00557 Metallopeptidase family M24 ECH_RS04330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ECH_RS04330 PF00364 Biotin-requiring enzyme ECH_RS04330 PF02817 e3 binding domain ECH_RS04340 PF00768 D-alanyl-D-alanine carboxypeptidase ECH_RS04340 PF07943 Penicillin-binding protein 5, C-terminal domain ECH_RS04355 PF17820 PDZ domain ECH_RS04355 PF02163 Peptidase family M50 ECH_RS04360 PF01103 Surface antigen ECH_RS04360 PF07244 Surface antigen variable number repeat ECH_RS04370 PF07977 FabA-like domain ECH_RS04375 PF01808 AICARFT/IMPCHase bienzyme ECH_RS04375 PF02142 MGS-like domain ECH_RS04380 PF01066 CDP-alcohol phosphatidyltransferase ECH_RS04385 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECH_RS04390 PF02104 SURF1 family ECH_RS04400 PF13685 Iron-containing alcohol dehydrogenase ECH_RS04405 PF00119 ATP synthase A chain ECH_RS04410 PF00137 ATP synthase subunit C ECH_RS04415 PF00430 ATP synthase B/B' CF(0) ECH_RS04425 PF02491 SHS2 domain inserted in FTSA ECH_RS04430 PF02386 Cation transport protein ECH_RS04440 PF01171 PP-loop family ECH_RS04445 PF17862 AAA+ lid domain ECH_RS04445 PF01434 Peptidase family M41 ECH_RS04445 PF06480 FtsH Extracellular ECH_RS04445 PF00004 ATPase family associated with various cellular activities (AAA) ECH_RS04450 PF01790 Prolipoprotein diacylglyceryl transferase ECH_RS04465 PF02355 Protein export membrane protein ECH_RS04470 PF00899 ThiF family ECH_RS04475 PF00156 Phosphoribosyl transferase domain ECH_RS04480 PF00154 recA bacterial DNA recombination protein ECH_RS04490 PF02881 SRP54-type protein, helical bundle domain ECH_RS04490 PF00448 SRP54-type protein, GTPase domain ECH_RS04495 PF18324 Hypothetical protein TT1725 ECH_RS04495 PF00180 Isocitrate/isopropylmalate dehydrogenase ECH_RS04500 PF01368 DHH family ECH_RS04500 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ECH_RS04500 PF17768 RecJ OB domain ECH_RS04500 PF02272 DHHA1 domain ECH_RS04505 PF12627 Probable RNA and SrmB- binding site of polymerase A ECH_RS04505 PF01743 Poly A polymerase head domain ECH_RS04505 PF13735 tRNA nucleotidyltransferase domain 2 putative ECH_RS04510 PF00334 Nucleoside diphosphate kinase ECH_RS04515 PF01381 Helix-turn-helix ECH_RS04520 PF01617 Surface antigen ECH_RS04545 PF01617 Surface antigen ECH_RS04555 PF01617 Surface antigen ECH_RS04575 PF01617 Surface antigen ECH_RS04585 PF01617 Surface antigen ECH_RS04590 PF01617 Surface antigen ECH_RS04595 PF01617 Surface antigen ECH_RS04605 PF01617 Surface antigen ECH_RS04615 PF01617 Surface antigen ECH_RS04650 PF02810 SEC-C motif ECH_RS04650 PF07516 SecA Wing and Scaffold domain ECH_RS04650 PF01043 SecA preprotein cross-linking domain ECH_RS04650 PF07517 SecA DEAD-like domain ECH_RS04660 PF00091 Tubulin/FtsZ family, GTPase domain ECH_RS04660 PF12327 FtsZ family, C-terminal domain ECH_RS04670 PF02130 Uncharacterized protein family UPF0054 ECH_RS04675 PF13614 AAA domain