CMV41_RS00005 SM00028 Tetratricopeptide repeats CMV41_RS00005 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00020 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV41_RS00050 SM00871 Bacterial transcription activator, effector binding domain CMV41_RS00085 SM00829 Enoylreductase CMV41_RS00090 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00110 SM00746 metallochaperone-like domain CMV41_RS00125 SM00849 Metallo-beta-lactamase superfamily CMV41_RS00140 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00150 SM00014 Acid phosphatase homologues CMV41_RS00165 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00175 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CMV41_RS00195 SM00098 Alkaline phosphatase homologues CMV41_RS00230 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00255 SM00448 cheY-homologous receiver domain CMV41_RS00255 SM00850 LytTr DNA-binding domain CMV41_RS00295 SM00421 helix_turn_helix, Lux Regulon CMV41_RS00300 SM00028 Tetratricopeptide repeats CMV41_RS00330 SM00382 ATPases associated with a variety of cellular activities CMV41_RS00340 SM01235 CMV41_RS00340 CMV41_RS00385 SM00421 helix_turn_helix, Lux Regulon CMV41_RS00400 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS00405 SM00758 CMV41_RS00405 CMV41_RS00410 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00450 SM00357 Cold shock protein domain CMV41_RS00455 SM00360 RNA recognition motif CMV41_RS00525 SM00487 DEAD-like helicases superfamily CMV41_RS00525 SM00490 helicase superfamily c-terminal domain CMV41_RS00600 SM00028 Tetratricopeptide repeats CMV41_RS00645 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00660 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00660 SM00871 Bacterial transcription activator, effector binding domain CMV41_RS00685 SM00235 Zinc-dependent metalloprotease CMV41_RS00685 SM00458 Ricin-type beta-trefoil CMV41_RS00695 SM00833 Cobalamin synthesis protein cobW C-terminal domain CMV41_RS00725 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00730 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS00765 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS00795 SM00100 Cyclic nucleotide-monophosphate binding domain CMV41_RS00825 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS00850 SM00849 Metallo-beta-lactamase superfamily CMV41_RS00875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS00885 SM00996 S-adenosyl-L-homocysteine hydrolase CMV41_RS00885 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CMV41_RS01000 SM01149 CMV41_RS01000 CMV41_RS01010 SM00642 Alpha-amylase domain CMV41_RS01030 SM00861 Transketolase, pyrimidine binding domain CMV41_RS01050 SM00344 helix_turn_helix ASNC type CMV41_RS01055 SM00479 CMV41_RS01055 CMV41_RS01085 SM00998 Adenylosuccinate lyase C-terminus CMV41_RS01090 SM01211 CMV41_RS01090 CMV41_RS01160 SM00798 AICARFT/IMPCHase bienzyme CMV41_RS01160 SM00851 MGS-like domain CMV41_RS01165 SM01209 CMV41_RS01165 CMV41_RS01165 SM01210 CMV41_RS01165 CMV41_RS01180 SM00487 DEAD-like helicases superfamily CMV41_RS01180 SM00490 helicase superfamily c-terminal domain CMV41_RS01200 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS01270 SM00382 ATPases associated with a variety of cellular activities CMV41_RS01295 SM00382 ATPases associated with a variety of cellular activities CMV41_RS01305 SM00830 Chorismate mutase type II CMV41_RS01315 SM00382 ATPases associated with a variety of cellular activities CMV41_RS01335 SM00363 S4 RNA-binding domain CMV41_RS01365 SM00100 Cyclic nucleotide-monophosphate binding domain CMV41_RS01385 SM00882 Coenzyme A transferase CMV41_RS01395 SM00882 Coenzyme A transferase CMV41_RS01530 SM01234 CMV41_RS01530 CMV41_RS01535 SM00382 ATPases associated with a variety of cellular activities CMV41_RS01570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CMV41_RS01580 SM00851 MGS-like domain CMV41_RS01580 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CMV41_RS01680 SM00671 Sel1-like repeats. CMV41_RS01685 SM00387 Histidine kinase-like ATPases CMV41_RS01690 SM00421 helix_turn_helix, Lux Regulon CMV41_RS01690 SM00448 cheY-homologous receiver domain CMV41_RS01830 SM00028 Tetratricopeptide repeats CMV41_RS01960 SM00852 Probable molybdopterin binding domain CMV41_RS01965 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS01970 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS01980 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS02020 SM00812 Alpha-L-fucosidase CMV41_RS02050 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS02080 SM00014 Acid phosphatase homologues CMV41_RS02185 SM01130 CMV41_RS02185 CMV41_RS02190 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS02195 SM01011 Aminopeptidase P, N-terminal domain CMV41_RS02230 SM00382 ATPases associated with a variety of cellular activities CMV41_RS02230 SM00760 Bacterial dnaA protein helix-turn-helix domain CMV41_RS02235 SM00226 Low molecular weight phosphatase family CMV41_RS02325 SM00650 Ribosomal RNA adenine dimethylases CMV41_RS02360 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS02405 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS02410 SM00382 ATPases associated with a variety of cellular activities CMV41_RS02435 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS02485 SM00893 Electron transfer flavoprotein domain CMV41_RS02490 SM00893 Electron transfer flavoprotein domain CMV41_RS02570 SM00562 CMV41_RS02570 CMV41_RS02595 SM00382 ATPases associated with a variety of cellular activities CMV41_RS02605 SM00850 LytTr DNA-binding domain CMV41_RS02615 SM00851 MGS-like domain CMV41_RS02680 SM00387 Histidine kinase-like ATPases CMV41_RS02680 SM00433 TopoisomeraseII CMV41_RS02685 SM00434 DNA Topoisomerase IV CMV41_RS02730 SM00028 Tetratricopeptide repeats CMV41_RS02735 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS02760 SM01006 Siderophore biosynthesis protein domain CMV41_RS02775 SM00382 ATPases associated with a variety of cellular activities CMV41_RS02840 SM00306 Hint (Hedgehog/Intein) domain N-terminal region CMV41_RS02845 SM00860 SMI1 / KNR4 family CMV41_RS02855 SM00448 cheY-homologous receiver domain CMV41_RS02855 SM00850 LytTr DNA-binding domain CMV41_RS02920 SM00850 LytTr DNA-binding domain CMV41_RS02930 SM00387 Histidine kinase-like ATPases CMV41_RS02930 SM00433 TopoisomeraseII CMV41_RS02980 SM00849 Metallo-beta-lactamase superfamily CMV41_RS03000 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS03030 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS03035 SM00382 ATPases associated with a variety of cellular activities CMV41_RS03045 SM00387 Histidine kinase-like ATPases CMV41_RS03045 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS03050 SM00448 cheY-homologous receiver domain CMV41_RS03050 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS03085 SM00382 ATPases associated with a variety of cellular activities CMV41_RS03155 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV41_RS03175 SM00636 CMV41_RS03175 CMV41_RS03180 SM00529 Helix-turn-helix diphteria tox regulatory element CMV41_RS03190 SM00434 DNA Topoisomerase IV CMV41_RS03250 SM00861 Transketolase, pyrimidine binding domain CMV41_RS03265 SM00421 helix_turn_helix, Lux Regulon CMV41_RS03305 SM00986 Uracil DNA glycosylase superfamily CMV41_RS03305 SM00987 UreE urease accessory protein, C-terminal domain CMV41_RS03330 SM00487 DEAD-like helicases superfamily CMV41_RS03330 SM00490 helicase superfamily c-terminal domain CMV41_RS03390 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS03395 SM00606 Cellulose Binding Domain Type IV CMV41_RS03475 SM00421 helix_turn_helix, Lux Regulon CMV41_RS03475 SM00448 cheY-homologous receiver domain CMV41_RS03480 SM00387 Histidine kinase-like ATPases CMV41_RS03485 SM00382 ATPases associated with a variety of cellular activities CMV41_RS03485 SM00448 cheY-homologous receiver domain CMV41_RS03525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV41_RS03525 SM00387 Histidine kinase-like ATPases CMV41_RS03525 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS03530 SM00448 cheY-homologous receiver domain CMV41_RS03530 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS03630 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS03655 SM00014 Acid phosphatase homologues CMV41_RS03665 SM00387 Histidine kinase-like ATPases CMV41_RS03675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS03675 SM00954 Region found in RelA / SpoT proteins CMV41_RS03740 SM00098 Alkaline phosphatase homologues CMV41_RS03755 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV41_RS03755 SM01134 CMV41_RS03755 CMV41_RS03800 SM00046 Diacylglycerol kinase catalytic domain (presumed) CMV41_RS03835 SM00448 cheY-homologous receiver domain CMV41_RS03835 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS03840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV41_RS03840 SM00387 Histidine kinase-like ATPases CMV41_RS03840 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS03870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV41_RS03870 SM00316 Ribosomal protein S1-like RNA-binding domain CMV41_RS03870 SM00732 Likely ribonuclease with RNase H fold. CMV41_RS03925 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS03990 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS04020 SM01276 CMV41_RS04020 CMV41_RS04025 SM00316 Ribosomal protein S1-like RNA-binding domain CMV41_RS04030 SM00487 DEAD-like helicases superfamily CMV41_RS04030 SM00490 helicase superfamily c-terminal domain CMV41_RS04045 SM00245 tail specific protease CMV41_RS04055 SM00245 tail specific protease CMV41_RS04065 SM00422 helix_turn_helix, mercury resistance CMV41_RS04080 SM00382 ATPases associated with a variety of cellular activities CMV41_RS04105 SM01329 CMV41_RS04105 CMV41_RS04130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CMV41_RS04175 SM00448 cheY-homologous receiver domain CMV41_RS04175 SM00850 LytTr DNA-binding domain CMV41_RS04185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS04220 SM00360 RNA recognition motif CMV41_RS04230 SM00341 Helicase and RNase D C-terminal CMV41_RS04230 SM00487 DEAD-like helicases superfamily CMV41_RS04230 SM00490 helicase superfamily c-terminal domain CMV41_RS04230 SM00956 CMV41_RS04230 CMV41_RS04295 SM00047 Lysozyme subfamily 2 CMV41_RS04315 SM00257 Lysin motif CMV41_RS04330 SM00382 ATPases associated with a variety of cellular activities CMV41_RS04335 SM00904 Riboflavin kinase CMV41_RS04340 SM00812 Alpha-L-fucosidase CMV41_RS04400 SM00849 Metallo-beta-lactamase superfamily CMV41_RS04470 SM00271 DnaJ molecular chaperone homology domain CMV41_RS04520 SM00100 Cyclic nucleotide-monophosphate binding domain CMV41_RS04610 SM01360 CMV41_RS04610 CMV41_RS04665 SM01350 CMV41_RS04665 CMV41_RS04705 SM00448 cheY-homologous receiver domain CMV41_RS04705 SM00850 LytTr DNA-binding domain CMV41_RS04720 SM00235 Zinc-dependent metalloprotease CMV41_RS04735 SM00382 ATPases associated with a variety of cellular activities CMV41_RS04810 SM00487 DEAD-like helicases superfamily CMV41_RS04810 SM00490 helicase superfamily c-terminal domain CMV41_RS04815 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV41_RS04815 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV41_RS04815 SM00493 CMV41_RS04815 CMV41_RS05040 SM00271 DnaJ molecular chaperone homology domain CMV41_RS05115 SM00487 DEAD-like helicases superfamily CMV41_RS05115 SM00490 helicase superfamily c-terminal domain CMV41_RS05185 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS05265 SM00479 CMV41_RS05265 CMV41_RS05265 SM00481 DNA polymerase alpha chain like domain CMV41_RS05270 SM00861 Transketolase, pyrimidine binding domain CMV41_RS05300 SM00981 CMV41_RS05300 CMV41_RS05330 SM00946 Prolyl-tRNA synthetase, C-terminal CMV41_RS05355 SM00271 DnaJ molecular chaperone homology domain CMV41_RS05430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS05435 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS05450 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS05525 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CMV41_RS05540 SM00148 Phospholipase C, catalytic domain (part); domain X CMV41_RS05555 SM00812 Alpha-L-fucosidase CMV41_RS05570 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV41_RS05570 SM00895 CMV41_RS05570 CMV41_RS05595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CMV41_RS05600 SM00028 Tetratricopeptide repeats CMV41_RS05605 SM00419 helix_turn_helix, cAMP Regulatory protein CMV41_RS05665 SM00812 Alpha-L-fucosidase CMV41_RS05680 SM00448 cheY-homologous receiver domain CMV41_RS05680 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS05685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV41_RS05685 SM00387 Histidine kinase-like ATPases CMV41_RS05685 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS05760 SM00831 Cation transporter/ATPase, N-terminus CMV41_RS05785 SM00876 Biotin and Thiamin Synthesis associated domain CMV41_RS05820 SM00382 ATPases associated with a variety of cellular activities CMV41_RS05835 SM00881 CoA binding domain CMV41_RS05845 SM00841 Elongation factor P, C-terminal CMV41_RS05845 SM01185 CMV41_RS05845 CMV41_RS05865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS05875 SM00448 cheY-homologous receiver domain CMV41_RS05885 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CMV41_RS05885 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CMV41_RS05910 SM00849 Metallo-beta-lactamase superfamily CMV41_RS05930 SM00867 YceI-like domain CMV41_RS05955 SM00316 Ribosomal protein S1-like RNA-binding domain CMV41_RS05955 SM00322 K homology RNA-binding domain CMV41_RS05965 SM01387 CMV41_RS05965 CMV41_RS05975 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV41_RS05975 SM00924 MgtE intracellular N domain CMV41_RS06000 SM00849 Metallo-beta-lactamase superfamily CMV41_RS06015 SM00857 Resolvase, N terminal domain CMV41_RS06100 SM00028 Tetratricopeptide repeats CMV41_RS06100 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06105 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06115 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06120 SM00028 Tetratricopeptide repeats CMV41_RS06130 SM00060 Fibronectin type 3 domain CMV41_RS06150 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06230 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06275 SM00448 cheY-homologous receiver domain CMV41_RS06275 SM00850 LytTr DNA-binding domain CMV41_RS06290 SM00867 YceI-like domain CMV41_RS06315 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06390 SM00829 Enoylreductase CMV41_RS06410 SM00984 UDP binding domain CMV41_RS06430 SM00382 ATPases associated with a variety of cellular activities CMV41_RS06490 SM00382 ATPases associated with a variety of cellular activities CMV41_RS06510 SM00382 ATPases associated with a variety of cellular activities CMV41_RS06510 SM00448 cheY-homologous receiver domain CMV41_RS06515 SM00387 Histidine kinase-like ATPases CMV41_RS06585 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06595 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06705 SM00382 ATPases associated with a variety of cellular activities CMV41_RS06705 SM00962 SRP54-type protein, GTPase domain CMV41_RS06705 SM00963 SRP54-type protein, helical bundle domain CMV41_RS06780 SM00421 helix_turn_helix, Lux Regulon CMV41_RS06795 SM00849 Metallo-beta-lactamase superfamily CMV41_RS06830 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS06910 SM00644 CMV41_RS06910 CMV41_RS07055 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS07170 SM00563 Phosphate acyltransferases CMV41_RS07185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CMV41_RS07225 SM00271 DnaJ molecular chaperone homology domain CMV41_RS07250 SM00829 Enoylreductase CMV41_RS07260 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS07295 SM01001 AIR carboxylase CMV41_RS07310 SM00363 S4 RNA-binding domain CMV41_RS07350 SM00849 Metallo-beta-lactamase superfamily CMV41_RS07415 SM00986 Uracil DNA glycosylase superfamily CMV41_RS07415 SM00987 UreE urease accessory protein, C-terminal domain CMV41_RS07430 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CMV41_RS07430 SM00534 ATPase domain of DNA mismatch repair MUTS family CMV41_RS07450 SM00100 Cyclic nucleotide-monophosphate binding domain CMV41_RS07475 SM00563 Phosphate acyltransferases CMV41_RS07505 SM00028 Tetratricopeptide repeats CMV41_RS07510 SM00327 von Willebrand factor (vWF) type A domain CMV41_RS07515 SM00327 von Willebrand factor (vWF) type A domain CMV41_RS07545 SM00967 RNA 2'-O ribose methyltransferase substrate binding CMV41_RS07600 SM00861 Transketolase, pyrimidine binding domain CMV41_RS07605 SM01217 CMV41_RS07605 CMV41_RS07650 SM00344 helix_turn_helix ASNC type CMV41_RS07685 SM00870 CMV41_RS07685 CMV41_RS07735 SM00387 Histidine kinase-like ATPases CMV41_RS07740 SM00421 helix_turn_helix, Lux Regulon CMV41_RS07740 SM00448 cheY-homologous receiver domain CMV41_RS07925 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CMV41_RS07940 SM00382 ATPases associated with a variety of cellular activities CMV41_RS07945 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08085 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08225 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08255 SM01217 CMV41_RS08255 CMV41_RS08280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS08375 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08445 SM00812 Alpha-L-fucosidase CMV41_RS08450 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS08455 SM00363 S4 RNA-binding domain CMV41_RS08460 SM00740 CMV41_RS08460 CMV41_RS08600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV41_RS08605 SM00919 Malic enzyme, NAD binding domain CMV41_RS08605 SM01274 CMV41_RS08605 CMV41_RS08625 SM00563 Phosphate acyltransferases CMV41_RS08655 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08655 SM00994 ClpX C4-type zinc finger CMV41_RS08655 SM01086 C-terminal, D2-small domain, of ClpB protein CMV41_RS08725 SM01321 CMV41_RS08725 CMV41_RS08740 SM01321 CMV41_RS08740 CMV41_RS08820 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08825 SM00382 ATPases associated with a variety of cellular activities CMV41_RS08825 SM01086 C-terminal, D2-small domain, of ClpB protein CMV41_RS09060 SM00953 CMV41_RS09060 CMV41_RS09165 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS09190 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV41_RS09200 SM01130 CMV41_RS09200 CMV41_RS09215 SM00710 Parallel beta-helix repeats CMV41_RS09235 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS09240 SM01038 Beta galactosidase small chain CMV41_RS09260 SM00560 LamG-like jellyroll fold domain CMV41_RS09275 SM00663 RNA polymerase I subunit A N-terminus CMV41_RS09310 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS09315 SM00642 Alpha-amylase domain CMV41_RS09395 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS09415 SM00028 Tetratricopeptide repeats CMV41_RS09420 SM00448 cheY-homologous receiver domain CMV41_RS09490 SM00858 CMV41_RS09490 CMV41_RS09515 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS09535 SM01018 B12 binding domain CMV41_RS09590 SM00534 ATPase domain of DNA mismatch repair MUTS family CMV41_RS09650 SM00382 ATPases associated with a variety of cellular activities CMV41_RS09735 SM01192 CMV41_RS09735 CMV41_RS09735 SM01193 CMV41_RS09735 CMV41_RS09750 SM00662 RNA polymerases D CMV41_RS09755 SM00363 S4 RNA-binding domain CMV41_RS09755 SM01390 CMV41_RS09755 CMV41_RS09830 SM01374 CMV41_RS09830 CMV41_RS09850 SM00322 K homology RNA-binding domain CMV41_RS09865 SM01382 CMV41_RS09865 CMV41_RS09865 SM01383 CMV41_RS09865 CMV41_RS09900 SM00248 ankyrin repeats CMV41_RS09920 SM01038 Beta galactosidase small chain CMV41_RS09960 SM01403 CMV41_RS09960 CMV41_RS09965 SM00838 Elongation factor G C-terminus CMV41_RS09965 SM00889 Elongation factor G, domain IV CMV41_RS10040 SM00450 Rhodanese Homology Domain CMV41_RS10045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS10075 SM00646 CMV41_RS10075 CMV41_RS10105 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV41_RS10105 SM00866 CMV41_RS10105 CMV41_RS10130 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CMV41_RS10130 SM00534 ATPase domain of DNA mismatch repair MUTS family CMV41_RS10160 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CMV41_RS10165 SM00257 Lysin motif CMV41_RS10260 SM00984 UDP binding domain CMV41_RS10265 SM00947 Carbonic anhydrase CMV41_RS10300 SM00487 DEAD-like helicases superfamily CMV41_RS10300 SM00490 helicase superfamily c-terminal domain CMV41_RS10300 SM00982 CMV41_RS10300 CMV41_RS10300 SM01058 CarD-like/TRCF domain CMV41_RS10335 SM00450 Rhodanese Homology Domain CMV41_RS10360 SM00859 Semialdehyde dehydrogenase, NAD binding domain CMV41_RS10455 SM01060 CMV41_RS10455 CMV41_RS10485 SM01235 CMV41_RS10485 CMV41_RS10530 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS10540 SM00382 ATPases associated with a variety of cellular activities CMV41_RS10590 SM00448 cheY-homologous receiver domain CMV41_RS10590 SM00850 LytTr DNA-binding domain CMV41_RS10615 SM00344 helix_turn_helix ASNC type CMV41_RS10645 SM00859 Semialdehyde dehydrogenase, NAD binding domain CMV41_RS10670 SM00100 Cyclic nucleotide-monophosphate binding domain CMV41_RS10670 SM00419 helix_turn_helix, cAMP Regulatory protein CMV41_RS10750 SM00382 ATPases associated with a variety of cellular activities CMV41_RS10750 SM00464 Found in ATP-dependent protease La (LON) CMV41_RS10785 SM00382 ATPases associated with a variety of cellular activities CMV41_RS10850 SM00937 CMV41_RS10850 CMV41_RS10875 SM00382 ATPases associated with a variety of cellular activities CMV41_RS10900 SM01409 CMV41_RS10900 CMV41_RS10965 SM00382 ATPases associated with a variety of cellular activities CMV41_RS10975 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS10995 SM01324 CMV41_RS10995 CMV41_RS11030 SM00478 endonuclease III CMV41_RS11075 SM01400 CMV41_RS11075 CMV41_RS11145 SM01340 CMV41_RS11145 CMV41_RS11195 SM00382 ATPases associated with a variety of cellular activities CMV41_RS11305 SM00354 helix_turn _helix lactose operon repressor CMV41_RS11405 SM00477 DNA/RNA non-specific endonuclease CMV41_RS11405 SM00892 DNA/RNA non-specific endonuclease CMV41_RS11450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS11470 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CMV41_RS11510 SM00506 Appr-1"-p processing enzyme CMV41_RS11615 SM00316 Ribosomal protein S1-like RNA-binding domain CMV41_RS11615 SM00357 Cold shock protein domain CMV41_RS11615 SM00955 CMV41_RS11615 CMV41_RS11635 SM01228 CMV41_RS11635 CMV41_RS11650 SM01005 Alanine racemase, C-terminal domain CMV41_RS11670 SM00812 Alpha-L-fucosidase CMV41_RS11675 SM00822 CMV41_RS11675 CMV41_RS11710 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS11710 SM00245 tail specific protease CMV41_RS11720 SM00899 CMV41_RS11720 CMV41_RS11735 SM00028 Tetratricopeptide repeats CMV41_RS11790 SM00448 cheY-homologous receiver domain CMV41_RS11790 SM00850 LytTr DNA-binding domain CMV41_RS11820 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS11865 SM00487 DEAD-like helicases superfamily CMV41_RS11865 SM00490 helicase superfamily c-terminal domain CMV41_RS11910 SM00327 von Willebrand factor (vWF) type A domain CMV41_RS11965 SM00957 SecA DEAD-like domain CMV41_RS11965 SM00958 SecA preprotein cross-linking domain CMV41_RS12035 SM00740 CMV41_RS12035 CMV41_RS12080 SM00842 Cell division protein FtsA CMV41_RS12085 SM00864 Tubulin/FtsZ family, GTPase domain CMV41_RS12085 SM00865 Tubulin/FtsZ family, C-terminal domain CMV41_RS12105 SM00382 ATPases associated with a variety of cellular activities CMV41_RS12105 SM01086 C-terminal, D2-small domain, of ClpB protein CMV41_RS12170 SM00450 Rhodanese Homology Domain CMV41_RS12170 SM00849 Metallo-beta-lactamase superfamily CMV41_RS12175 SM00450 Rhodanese Homology Domain CMV41_RS12200 SM00479 CMV41_RS12200 CMV41_RS12260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CMV41_RS12325 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS12350 SM00220 Serine/Threonine protein kinases, catalytic domain CMV41_RS12360 SM00857 Resolvase, N terminal domain CMV41_RS12365 SM00857 Resolvase, N terminal domain CMV41_RS12385 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS12465 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CMV41_RS12465 SM00534 ATPase domain of DNA mismatch repair MUTS family CMV41_RS12495 SM00245 tail specific protease CMV41_RS12500 SM00245 tail specific protease CMV41_RS12560 SM00448 cheY-homologous receiver domain CMV41_RS12560 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS12565 SM00387 Histidine kinase-like ATPases CMV41_RS12565 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS12620 SM00382 ATPases associated with a variety of cellular activities CMV41_RS12645 SM00382 ATPases associated with a variety of cellular activities CMV41_RS12655 SM00357 Cold shock protein domain CMV41_RS12655 SM00382 ATPases associated with a variety of cellular activities CMV41_RS12695 SM00354 helix_turn _helix lactose operon repressor CMV41_RS12720 SM00935 Outer membrane protein (OmpH-like) CMV41_RS12740 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV41_RS12740 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV41_RS12740 SM00493 CMV41_RS12740 CMV41_RS12820 SM00354 helix_turn _helix lactose operon repressor CMV41_RS13000 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV41_RS13000 SM01240 CMV41_RS13000 CMV41_RS13070 SM00878 Biotin carboxylase C-terminal domain CMV41_RS13100 SM00387 Histidine kinase-like ATPases CMV41_RS13100 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS13110 SM00382 ATPases associated with a variety of cellular activities CMV41_RS13145 SM00977 TilS substrate C-terminal domain CMV41_RS13210 SM00028 Tetratricopeptide repeats CMV41_RS13225 SM00448 cheY-homologous receiver domain CMV41_RS13225 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS13230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV41_RS13230 SM00387 Histidine kinase-like ATPases CMV41_RS13230 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS13245 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. CMV41_RS13250 SM00382 ATPases associated with a variety of cellular activities CMV41_RS13265 SM01323 CMV41_RS13265 CMV41_RS13280 SM00245 tail specific protease CMV41_RS13285 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS13365 SM00849 Metallo-beta-lactamase superfamily CMV41_RS13375 SM00382 ATPases associated with a variety of cellular activities CMV41_RS13410 SM00358 Double-stranded RNA binding motif CMV41_RS13410 SM00535 Ribonuclease III family CMV41_RS13415 SM00825 Beta-ketoacyl synthase CMV41_RS13430 SM00840 CMV41_RS13430 CMV41_RS13435 SM01065 Starch binding domain CMV41_RS13490 SM00465 GIY-YIG type nucleases (URI domain) CMV41_RS13555 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CMV41_RS13555 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CMV41_RS13575 SM00649 Ribosomal protein L11/L12 CMV41_RS13610 SM00072 Guanylate kinase homologues. CMV41_RS13620 SM00905 Dihydroneopterin aldolase CMV41_RS13705 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS13720 SM00849 Metallo-beta-lactamase superfamily CMV41_RS13730 SM00932 Scaffold protein Nfu/NifU N terminal CMV41_RS13790 SM00382 ATPases associated with a variety of cellular activities CMV41_RS13790 SM00962 SRP54-type protein, GTPase domain CMV41_RS13790 SM00963 SRP54-type protein, helical bundle domain CMV41_RS13820 SM00487 DEAD-like helicases superfamily CMV41_RS13820 SM00490 helicase superfamily c-terminal domain CMV41_RS13850 SM00829 Enoylreductase CMV41_RS13895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS13895 SM00245 tail specific protease CMV41_RS13920 SM00479 CMV41_RS13920 CMV41_RS13945 SM00861 Transketolase, pyrimidine binding domain CMV41_RS13995 SM00411 bacterial (prokaryotic) histone like domain CMV41_RS14090 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS14165 SM00028 Tetratricopeptide repeats CMV41_RS14190 SM00883 Chaperonin 10 Kd subunit CMV41_RS14240 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS14245 SM00382 ATPases associated with a variety of cellular activities CMV41_RS14305 SM00836 DALR anticodon binding domain CMV41_RS14305 SM01016 Arginyl tRNA synthetase N terminal dom CMV41_RS14365 SM00829 Enoylreductase CMV41_RS14385 SM00382 ATPases associated with a variety of cellular activities CMV41_RS14410 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS14430 SM00382 ATPases associated with a variety of cellular activities CMV41_RS14485 SM00382 ATPases associated with a variety of cellular activities CMV41_RS14495 SM00641 Glycosyl hydrolases family 25 CMV41_RS14515 SM00344 helix_turn_helix ASNC type CMV41_RS14520 SM01133 CMV41_RS14520 CMV41_RS14530 SM01004 Delta-aminolevulinic acid dehydratase CMV41_RS14580 SM01235 CMV41_RS14580 CMV41_RS14605 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS14645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMV41_RS14695 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS14745 SM00047 Lysozyme subfamily 2 CMV41_RS14745 SM00257 Lysin motif CMV41_RS14760 SM00487 DEAD-like helicases superfamily CMV41_RS14760 SM00490 helicase superfamily c-terminal domain CMV41_RS14775 SM01130 CMV41_RS14775 CMV41_RS14790 SM00363 S4 RNA-binding domain CMV41_RS14925 SM00867 YceI-like domain CMV41_RS14930 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CMV41_RS14940 SM00855 Phosphoglycerate mutase family CMV41_RS14950 SM00732 Likely ribonuclease with RNase H fold. CMV41_RS14975 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CMV41_RS15050 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CMV41_RS15060 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CMV41_RS15145 SM01091 Transporter associated domain CMV41_RS15245 SM00829 Enoylreductase CMV41_RS15270 SM01321 CMV41_RS15270 CMV41_RS15375 SM00448 cheY-homologous receiver domain CMV41_RS15375 SM00850 LytTr DNA-binding domain CMV41_RS15395 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS15490 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS15560 SM00382 ATPases associated with a variety of cellular activities CMV41_RS15565 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS15690 SM00450 Rhodanese Homology Domain CMV41_RS15690 SM00849 Metallo-beta-lactamase superfamily CMV41_RS15745 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS15785 SM00849 Metallo-beta-lactamase superfamily CMV41_RS15805 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV41_RS15825 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS15825 SM00876 Biotin and Thiamin Synthesis associated domain CMV41_RS15885 SM00382 ATPases associated with a variety of cellular activities CMV41_RS15960 SM01119 CMV41_RS15960 CMV41_RS15970 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV41_RS15970 SM01134 CMV41_RS15970 CMV41_RS15975 SM00382 ATPases associated with a variety of cellular activities CMV41_RS16000 SM00756 CMV41_RS16000 CMV41_RS16025 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS16160 SM00344 helix_turn_helix ASNC type CMV41_RS16210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV41_RS16210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV41_RS16210 SM00493 CMV41_RS16210 CMV41_RS16220 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS16225 SM00248 ankyrin repeats CMV41_RS16240 SM00028 Tetratricopeptide repeats CMV41_RS16255 SM01290 CMV41_RS16255 CMV41_RS16275 SM00382 ATPases associated with a variety of cellular activities CMV41_RS16280 SM00867 YceI-like domain CMV41_RS16335 SM00493 CMV41_RS16335 CMV41_RS16360 SM00843 CMV41_RS16360 CMV41_RS16385 SM00244 prohibitin homologues CMV41_RS16395 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS16490 SM00487 DEAD-like helicases superfamily CMV41_RS16490 SM00490 helicase superfamily c-terminal domain CMV41_RS16510 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS16585 SM00271 DnaJ molecular chaperone homology domain CMV41_RS16670 SM00530 Helix-turn-helix XRE-family like proteins CMV41_RS16780 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV41_RS16780 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV41_RS16780 SM00493 CMV41_RS16780 CMV41_RS16790 SM00487 DEAD-like helicases superfamily CMV41_RS16790 SM00490 helicase superfamily c-terminal domain CMV41_RS16925 SM00953 CMV41_RS16925 CMV41_RS16980 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS16990 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS17025 SM00448 cheY-homologous receiver domain CMV41_RS17025 SM00850 LytTr DNA-binding domain CMV41_RS17050 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS17080 SM00849 Metallo-beta-lactamase superfamily CMV41_RS17125 SM00644 CMV41_RS17125 CMV41_RS17145 SM01217 CMV41_RS17145 CMV41_RS17170 SM00091 PAS domain CMV41_RS17170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV41_RS17170 SM00387 Histidine kinase-like ATPases CMV41_RS17170 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS17205 SM00382 ATPases associated with a variety of cellular activities CMV41_RS17205 SM00448 cheY-homologous receiver domain CMV41_RS17215 SM00448 cheY-homologous receiver domain CMV41_RS17215 SM00850 LytTr DNA-binding domain CMV41_RS17245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV41_RS17245 SM00292 breast cancer carboxy-terminal domain CMV41_RS17245 SM00532 Ligase N family CMV41_RS17260 SM00318 Staphylococcal nuclease homologues CMV41_RS17265 SM00822 CMV41_RS17265 CMV41_RS17275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CMV41_RS17285 SM00382 ATPases associated with a variety of cellular activities CMV41_RS17300 SM00937 CMV41_RS17300 CMV41_RS17315 SM00400 zinc finger CMV41_RS17315 SM00493 CMV41_RS17315 CMV41_RS17350 SM00344 helix_turn_helix ASNC type CMV41_RS17395 SM00287 Bacterial SH3 domain homologues CMV41_RS17445 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS17475 SM01230 CMV41_RS17475 CMV41_RS17675 SM00448 cheY-homologous receiver domain CMV41_RS17675 SM00862 Transcriptional regulatory protein, C terminal CMV41_RS17680 SM00387 Histidine kinase-like ATPases CMV41_RS17680 SM00388 His Kinase A (phosphoacceptor) domain CMV41_RS17690 SM00642 Alpha-amylase domain CMV41_RS17740 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV41_RS17745 SM00028 Tetratricopeptide repeats CMV41_RS17745 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS17750 SM00028 Tetratricopeptide repeats CMV41_RS17750 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS17755 SM00028 Tetratricopeptide repeats CMV41_RS17755 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS17770 SM00852 Probable molybdopterin binding domain CMV41_RS17810 SM00903 Flavin reductase like domain CMV41_RS17850 SM00563 Phosphate acyltransferases CMV41_RS17860 SM00155 Phospholipase D. Active site motifs. CMV41_RS17870 SM00244 prohibitin homologues CMV41_RS17890 SM00411 bacterial (prokaryotic) histone like domain CMV41_RS17895 SM00478 endonuclease III CMV41_RS17895 SM00525 CMV41_RS17895 CMV41_RS17955 SM00450 Rhodanese Homology Domain CMV41_RS18020 SM00867 YceI-like domain CMV41_RS18055 SM00342 helix_turn_helix, arabinose operon control protein CMV41_RS18120 SM00644 CMV41_RS18120 CMV41_RS18130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV41_RS18130 SM00245 tail specific protease CMV41_RS18175 SM00825 Beta-ketoacyl synthase CMV41_RS18265 SM00480 DNA polymerase III beta subunit CMV41_RS18270 SM00873 B3/4 domain CMV41_RS18270 SM00874 tRNA synthetase B5 domain CMV41_RS18270 SM00896 Ferredoxin-fold anticodon binding domain CMV41_RS18390 SM00322 K homology RNA-binding domain CMV41_RS18390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV41_RS18395 SM00860 SMI1 / KNR4 family CMV41_RS18405 SM00636 CMV41_RS18405 CMV41_RS18440 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV41_RS18465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CMV41_RS18465 SM00474 3'-5' exonuclease CMV41_RS18465 SM00475 5'-3' exonuclease CMV41_RS18465 SM00482 DNA polymerase A domain CMV41_RS18520 SM00028 Tetratricopeptide repeats CMV41_RS18530 SM00245 tail specific protease CMV41_RS18550 SM00382 ATPases associated with a variety of cellular activities CMV41_RS18595 SM00487 DEAD-like helicases superfamily CMV41_RS18595 SM00490 helicase superfamily c-terminal domain CMV41_RS18625 SM00487 DEAD-like helicases superfamily CMV41_RS18625 SM00490 helicase superfamily c-terminal domain CMV41_RS18635 SM00788 Adenylosuccinate synthetase CMV41_RS18650 SM00470 ParB-like nuclease domain CMV41_RS18730 SM00028 Tetratricopeptide repeats CMV41_RS18735 SM00421 helix_turn_helix, Lux Regulon CMV41_RS18750 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CMV41_RS18805 SM00382 ATPases associated with a variety of cellular activities CMV41_RS18805 SM01086 C-terminal, D2-small domain, of ClpB protein CMV41_RS18875 SM00825 Beta-ketoacyl synthase