locus-tag	class	description
FOY96_RS00010	COG0592	DNA-directed DNA polymerase activity
FOY96_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOY96_RS00030	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS00030	COG3321	synthase
FOY96_RS00030	COG0604	alcohol dehydrogenase
FOY96_RS00035	COG0561	phosphatase activity
FOY96_RS00040	COG0823	Involved in the tonB-independent uptake of proteins
FOY96_RS00045	COG5645	(Lipo)protein
FOY96_RS00055	COG0071	Belongs to the small heat shock protein (HSP20) family
FOY96_RS00060	COG2985	domain, Protein
FOY96_RS00065	COG2188	Transcriptional regulator
FOY96_RS00080	COG2149	membrane
FOY96_RS00095	COG2610	gluconate transmembrane transporter activity
FOY96_RS00100	COG0583	DNA-binding transcription factor activity
FOY96_RS00110	COG2814	Major facilitator Superfamily
FOY96_RS00135	COG0028	Belongs to the TPP enzyme family
FOY96_RS00140	COG0440	acetolactate synthase activity
FOY96_RS00145	COG2197	response regulator
FOY96_RS00175	COG0697	spore germination
FOY96_RS00180	COG4580	involved in the transport of maltose and maltodextrins
FOY96_RS00185	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOY96_RS00190	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS00195	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS00195	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS00205	COG1609	Transcriptional regulator
FOY96_RS00225	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS00235	COG0454	-acetyltransferase
FOY96_RS00240	COG1464	Belongs to the NlpA lipoprotein family
FOY96_RS00245	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOY96_RS00270	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOY96_RS00275	COG3272	Protein of unknown function (DUF1722)
FOY96_RS00285	COG0789	Transcriptional regulator
FOY96_RS00300	COG3539	Fimbrial protein
FOY96_RS00310	COG3121	Chaperone
FOY96_RS00345	COG0519	Catalyzes the synthesis of GMP from XMP
FOY96_RS00375	COG2211	Major facilitator Superfamily
FOY96_RS00380	COG1501	Belongs to the glycosyl hydrolase 31 family
FOY96_RS00385	COG2982	Protein involved in outer membrane biogenesis
FOY96_RS00390	COG2233	PERMEase
FOY96_RS00395	COG0786	glutamate:sodium symporter activity
FOY96_RS00400	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOY96_RS00405	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY96_RS00410	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOY96_RS00425	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOY96_RS00430	COG2860	membrane
FOY96_RS00435	COG1561	YicC-like family, N-terminal region
FOY96_RS00445	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOY96_RS00460	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOY96_RS00465	COG2003	Belongs to the UPF0758 family
FOY96_RS00470	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOY96_RS00475	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOY96_RS00480	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOY96_RS00485	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOY96_RS00495	COG1519	Transferase
FOY96_RS00500	COG1216	Glycosyl transferase, family 2
FOY96_RS00505	COG0438	transferase activity, transferring glycosyl groups
FOY96_RS00510	COG0438	transferase activity, transferring glycosyl groups
FOY96_RS00515	COG0859	PFAM glycosyl transferase family 9
FOY96_RS00530	COG1215	transferase activity, transferring glycosyl groups
FOY96_RS00540	COG0859	PFAM glycosyl transferase family 9
FOY96_RS00545	COG0859	PFAM glycosyl transferase family 9
FOY96_RS00560	COG1063	alcohol dehydrogenase
FOY96_RS00575	COG0463	Glycosyl transferase, family 2
FOY96_RS00580	COG2861	carbohydrate metabolic process
FOY96_RS00585	COG4942	peptidase
FOY96_RS00590	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FOY96_RS00595	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY96_RS00600	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOY96_RS00605	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOY96_RS00610	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOY96_RS00620	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOY96_RS00625	COG2271	Major facilitator Superfamily
FOY96_RS00630	COG1304	FMN binding
FOY96_RS00635	COG2186	Transcriptional regulator
FOY96_RS00650	COG3722	fumarate hydratase activity
FOY96_RS00660	COG2213	PTS system mannitol-specific
FOY96_RS00660	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS00670	COG1566	PFAM secretion protein HlyD family protein
FOY96_RS00675	COG0625	glutathione transferase activity
FOY96_RS00685	COG3276	selenocysteine insertion sequence binding
FOY96_RS00690	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS00695	COG0583	DNA-binding transcription factor activity
FOY96_RS00700	COG3713	MltA-interacting MipA family protein
FOY96_RS00705	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY96_RS00720	COG3977	Valine--pyruvate aminotransferase
FOY96_RS00725	COG0366	Alpha amylase catalytic
FOY96_RS00730	COG2992	FlgJ-related protein
FOY96_RS00735	COG1609	Transcriptional regulator
FOY96_RS00735	COG2207	Transcriptional regulator
FOY96_RS00740	COG4214	carbohydrate transport
FOY96_RS00750	COG4213	ABC transporter substrate-binding protein
FOY96_RS00755	COG2115	Belongs to the xylose isomerase family
FOY96_RS00760	COG1070	Carbohydrate kinase
FOY96_RS00765	COG1335	isochorismatase
FOY96_RS00770	COG2169	Transcriptional regulator
FOY96_RS00775	COG3274	enterobacterial common antigen metabolic process
FOY96_RS00785	COG0752	glycyl-tRNA synthetase alpha subunit
FOY96_RS00790	COG0751	glycine-tRNA ligase activity
FOY96_RS00805	COG0488	(ABC) transporter
FOY96_RS00810	COG2944	sequence-specific DNA binding
FOY96_RS00820	COG1278	Cold shock
FOY96_RS00825	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY96_RS00835	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY96_RS00845	COG1609	Transcriptional regulator
FOY96_RS00850	COG2885	chlorophyll binding
FOY96_RS00855	COG0243	molybdopterin cofactor binding
FOY96_RS00860	COG0456	acetyltransferase
FOY96_RS00865	COG2818	Glycosylase
FOY96_RS00870	COG5571	outer membrane autotransporter
FOY96_RS00880	COG2223	nitrite transmembrane transporter activity
FOY96_RS00885	COG2194	sulfuric ester hydrolase activity
FOY96_RS00895	COG0747	negative chemotaxis
FOY96_RS00900	COG0601	transmembrane transport
FOY96_RS00905	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS00910	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS00915	COG4608	Belongs to the ABC transporter superfamily
FOY96_RS00920	COG1072	(Pantothenic acid kinase))
FOY96_RS00955	COG0250	Participates in transcription elongation, termination and antitermination
FOY96_RS01000	COG3706	GGDEF domain
FOY96_RS01005	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOY96_RS01010	COG2022	thiamine diphosphate biosynthetic process
FOY96_RS01015	COG2104	thiamine diphosphate biosynthetic process
FOY96_RS01020	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOY96_RS01035	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FOY96_RS01045	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOY96_RS01055	COG3068	Protein conserved in bacteria
FOY96_RS01070	COG0151	Belongs to the GarS family
FOY96_RS01100	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOY96_RS01110	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOY96_RS01130	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOY96_RS01135	COG3657	addiction module killer protein
FOY96_RS01140	COG1187	pseudouridine synthase activity
FOY96_RS01155	COG0527	aspartate kinase activity
FOY96_RS01180	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY96_RS01185	COG3223	Belongs to the PsiE family
FOY96_RS01210	COG4580	involved in the transport of maltose and maltodextrins
FOY96_RS01220	COG3161	chorismate lyase activity
FOY96_RS01225	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FOY96_RS01235	COG3714	YhhN family
FOY96_RS01245	COG3776	membrane
FOY96_RS01250	COG0742	ribosomal rna small subunit methyltransferase
FOY96_RS01255	COG0552	protein localization to endoplasmic reticulum
FOY96_RS01260	COG2884	Cell division ATP-binding protein ftsE
FOY96_RS01265	COG2177	Part of the ABC transporter FtsEX involved in
FOY96_RS01270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOY96_RS01275	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOY96_RS01295	COG0683	leucine binding
FOY96_RS01310	COG0411	ABC transporter
FOY96_RS01340	COG0584	glycerophosphoryl diester phosphodiesterase
FOY96_RS01350	COG0405	Gamma-glutamyltransferase
FOY96_RS01355	COG1247	-acetyltransferase
FOY96_RS01360	COG0673	inositol 2-dehydrogenase activity
FOY96_RS01365	COG1741	Belongs to the pirin family
FOY96_RS01370	COG1609	Transcriptional regulator
FOY96_RS01375	COG3265	gluconokinase activity
FOY96_RS01380	COG2610	gluconate transmembrane transporter activity
FOY96_RS01385	COG2937	Belongs to the GPAT DAPAT family
FOY96_RS01390	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOY96_RS01395	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY96_RS01400	COG0534	Mate efflux family protein
FOY96_RS01405	COG3237	CsbD-like
FOY96_RS01410	COG0735	belongs to the Fur family
FOY96_RS01425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOY96_RS01435	COG0604	alcohol dehydrogenase
FOY96_RS01440	COG0305	Participates in initiation and elongation during chromosome replication
FOY96_RS01455	COG2197	response regulator
FOY96_RS01475	COG3772	lysozyme
FOY96_RS01490	COG1448	Aminotransferase
FOY96_RS01495	COG3700	Belongs to the class B bacterial acid phosphatase family
FOY96_RS01505	COG2315	Protein conserved in bacteria
FOY96_RS01515	COG0629	single-stranded DNA binding
FOY96_RS01525	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOY96_RS01535	COG0789	Transcriptional regulator
FOY96_RS01545	COG2252	PERMEase
FOY96_RS01550	COG0025	NhaP-type Na H and K H
FOY96_RS01555	COG0583	DNA-binding transcription factor activity
FOY96_RS01560	COG1380	Effector of murein hydrolase LrgA
FOY96_RS01565	COG1346	cytolysis
FOY96_RS01570	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOY96_RS01575	COG3162	membrane
FOY96_RS01580	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOY96_RS01585	COG1301	dicarboxylic acid transport
FOY96_RS01595	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FOY96_RS01620	COG0191	fructose-bisphosphate aldolase activity
FOY96_RS01635	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS01640	COG1129	ABC transporter
FOY96_RS01655	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOY96_RS01660	COG0456	acetyltransferase
FOY96_RS01665	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOY96_RS01670	COG3454	Phosphonate metabolism
FOY96_RS01675	COG4778	phosphonate C-P lyase system protein PhnL
FOY96_RS01680	COG4107	phosphonate C-P lyase system protein PhnK
FOY96_RS01685	COG3627	carbon phosphorus lyase activity
FOY96_RS01690	COG3626	phosphonate metabolism
FOY96_RS01695	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FOY96_RS01700	COG3624	Phosphonate C-P lyase system protein PhnG
FOY96_RS01705	COG2188	Transcriptional regulator
FOY96_RS01710	COG3639	organic phosphonate transmembrane transporter activity
FOY96_RS01715	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FOY96_RS01725	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FOY96_RS01730	COG2824	Alkylphosphonate utilization operon protein PhnA
FOY96_RS01735	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOY96_RS01755	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY96_RS01790	COG1126	abc transporter atp-binding protein
FOY96_RS01795	COG0765	amino acid transport
FOY96_RS01800	COG4597	amino acid ABC transporter
FOY96_RS01805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS01815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS01820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS01825	COG1309	transcriptional regulator
FOY96_RS01855	COG2264	protein methyltransferase activity
FOY96_RS01860	COG4145	pantothenate transmembrane transporter activity
FOY96_RS01865	COG3924	membrane
FOY96_RS01870	COG0439	Biotin carboxylase
FOY96_RS01875	COG0511	ligase activity, forming carbon-carbon bonds
FOY96_RS01880	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOY96_RS01890	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FOY96_RS01900	COG0604	alcohol dehydrogenase
FOY96_RS01905	COG2200	EAL domain
FOY96_RS01905	COG2199	diguanylate cyclase activity
FOY96_RS01910	COG1077	Cell shape determining protein MreB Mrl
FOY96_RS01915	COG1792	Involved in formation and maintenance of cell shape
FOY96_RS01920	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FOY96_RS01935	COG3164	Protein of unknown function
FOY96_RS01940	COG0312	modulator of DNA gyrase
FOY96_RS01945	COG0583	DNA-binding transcription factor activity
FOY96_RS01960	COG1289	transmembrane transporter activity
FOY96_RS01965	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS01970	COG2732	(Barnase) inhibitor
FOY96_RS01985	COG1438	arginine binding
FOY96_RS01990	COG0039	L-malate dehydrogenase activity
FOY96_RS01995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOY96_RS02000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOY96_RS02005	COG3105	Protein conserved in bacteria
FOY96_RS02010	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOY96_RS02020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOY96_RS02030	COG0625	glutathione transferase activity
FOY96_RS02035	COG2969	positive regulation of protein catabolic process
FOY96_RS02040	COG0493	'glutamate synthase
FOY96_RS02045	COG0069	glutamate synthase activity
FOY96_RS02045	COG0067	glutamate synthase
FOY96_RS02045	COG0070	glutamate synthase
FOY96_RS02050	COG1242	4 iron, 4 sulfur cluster binding
FOY96_RS02055	COG0433	COG0433 Predicted ATPase
FOY96_RS02065	COG1064	alcohol dehydrogenase
FOY96_RS02080	COG2927	DNA polymerase III (CHI subunit)
FOY96_RS02085	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY96_RS02090	COG0795	lipopolysaccharide-transporting ATPase activity
FOY96_RS02095	COG0795	lipopolysaccharide-transporting ATPase activity
FOY96_RS02100	COG5002	protein histidine kinase activity
FOY96_RS02100	COG2198	Histidine kinase
FOY96_RS02100	COG0784	Response regulator, receiver
FOY96_RS02105	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FOY96_RS02115	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS02135	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOY96_RS02140	COG1137	ATPase activity
FOY96_RS02145	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FOY96_RS02150	COG3117	lipopolysaccharide transmembrane transporter activity
FOY96_RS02155	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOY96_RS02165	COG0530	calcium, potassium:sodium antiporter activity
FOY96_RS02170	COG1127	ABC transporter
FOY96_RS02175	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOY96_RS02180	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOY96_RS02185	COG2854	intermembrane phospholipid transfer
FOY96_RS02190	COG3113	response to antibiotic
FOY96_RS02195	COG5007	Belongs to the BolA IbaG family
FOY96_RS02200	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOY96_RS02205	COG3423	Transcriptional regulator
FOY96_RS02210	COG0142	geranyltranstransferase activity
FOY96_RS02215	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOY96_RS02225	COG0697	spore germination
FOY96_RS02230	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOY96_RS02235	COG0642	Histidine kinase
FOY96_RS02240	COG0745	RESPONSE REGULATOR receiver
FOY96_RS02245	COG2027	D-alanyl-D-alanine carboxypeptidase
FOY96_RS02255	COG1534	Rna-binding protein
FOY96_RS02260	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOY96_RS02270	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOY96_RS02275	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY96_RS02280	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOY96_RS02290	COG0137	argininosuccinate synthase activity
FOY96_RS02315	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOY96_RS02320	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOY96_RS02325	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOY96_RS02330	COG1185	polyribonucleotide nucleotidyltransferase activity
FOY96_RS02345	COG0513	Belongs to the DEAD box helicase family
FOY96_RS02350	COG0814	amino acid
FOY96_RS02355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS02360	COG0826	peptidase U32
FOY96_RS02365	COG0826	peptidase U32
FOY96_RS02370	COG3154	lipid carrier protein
FOY96_RS02375	COG3153	acetyltransferase
FOY96_RS02380	COG2827	Endonuclease containing a URI domain
FOY96_RS02385	COG3787	Belongs to the UPF0306 family
FOY96_RS02390	COG0693	protein deglycase activity
FOY96_RS02395	COG0702	epimerase
FOY96_RS02400	COG0701	Predicted permease
FOY96_RS02405	COG2823	Periplasmic or secreted lipoprotein
FOY96_RS02410	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOY96_RS02415	COG0792	nuclease activity
FOY96_RS02420	COG3107	peptidoglycan biosynthetic process
FOY96_RS02430	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOY96_RS02435	COG2721	sulfolactate sulfo-lyase activity
FOY96_RS02445	COG2084	Dehydrogenase
FOY96_RS02455	COG0583	DNA-binding transcription factor activity
FOY96_RS02460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOY96_RS02465	COG0814	amino acid
FOY96_RS02470	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOY96_RS02475	COG1882	Formate acetyltransferase
FOY96_RS02485	COG1741	Belongs to the pirin family
FOY96_RS02490	COG0583	DNA-binding transcription factor activity
FOY96_RS02495	COG3152	Membrane
FOY96_RS02500	COG0435	Glutathione S-transferase
FOY96_RS02505	COG2259	Doxx family
FOY96_RS02515	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FOY96_RS02520	COG4575	ribosome binding
FOY96_RS02525	COG1422	Protein of unknown function (DUF1090)
FOY96_RS02535	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS02540	COG2186	Transcriptional regulator
FOY96_RS02545	COG2271	Major facilitator Superfamily
FOY96_RS02555	COG2721	sulfolactate sulfo-lyase activity
FOY96_RS02565	COG0861	Integral membrane protein TerC family
FOY96_RS02570	COG0673	inositol 2-dehydrogenase activity
FOY96_RS02575	COG1451	nucleotide metabolic process
FOY96_RS02585	COG1902	pentaerythritol trinitrate reductase activity
FOY96_RS02585	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOY96_RS02590	COG1070	Carbohydrate kinase
FOY96_RS02595	COG2390	Transcriptional regulator
FOY96_RS02600	COG1129	ABC transporter
FOY96_RS02605	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS02610	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS02615	COG1879	ABC-type sugar transport system periplasmic component
FOY96_RS02620	COG1830	Aldolase
FOY96_RS02625	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FOY96_RS02645	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOY96_RS02650	COG0840	transmembrane signaling receptor activity
FOY96_RS02655	COG0840	transmembrane signaling receptor activity
FOY96_RS02660	COG1695	Transcriptional regulator
FOY96_RS02665	COG2375	cellular response to nickel ion
FOY96_RS02690	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOY96_RS02760	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FOY96_RS02775	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOY96_RS02825	COG4974	Belongs to the 'phage' integrase family
FOY96_RS02870	COG3663	DNA glycosylase
FOY96_RS02880	COG0358	DNA primase activity
FOY96_RS02885	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOY96_RS02895	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FOY96_RS02900	COG0830	nickel cation binding
FOY96_RS02910	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FOY96_RS02915	COG0804	urea catabolic process
FOY96_RS02920	COG0832	Belongs to the urease beta subunit family
FOY96_RS02925	COG0831	urea catabolic process
FOY96_RS02930	COG0829	nickel cation binding
FOY96_RS02935	COG0657	acetylesterase activity
FOY96_RS02940	COG1846	Transcriptional regulator
FOY96_RS02945	COG0477	Major facilitator Superfamily
FOY96_RS02955	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOY96_RS02960	COG1968	undecaprenyl-diphosphatase activity
FOY96_RS02965	COG0617	tRNA 3'-terminal CCA addition
FOY96_RS02970	COG4991	sh3 domain protein
FOY96_RS02975	COG3025	triphosphatase activity
FOY96_RS02985	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOY96_RS02985	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOY96_RS02995	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FOY96_RS03005	COG3384	dioxygenase
FOY96_RS03010	COG0754	glutathionylspermidine amidase activity
FOY96_RS03025	COG0494	nUDIX hydrolase
FOY96_RS03030	COG3151	Protein conserved in bacteria
FOY96_RS03035	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOY96_RS03040	COG3150	esterase
FOY96_RS03045	COG0187	DNA topoisomerase II activity
FOY96_RS03050	COG4774	siderophore transport
FOY96_RS03055	COG1120	ATPase activity
FOY96_RS03060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS03065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS03080	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FOY96_RS03085	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY96_RS03100	COG3111	PFAM Bacterial OB fold (BOF) protein
FOY96_RS03120	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOY96_RS03125	COG1032	radical SAM domain protein
FOY96_RS03135	COG1979	alcohol dehydrogenase
FOY96_RS03140	COG2207	Transcriptional regulator
FOY96_RS03145	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS03150	COG0626	cystathionine gamma-synthase activity
FOY96_RS03160	COG0848	biopolymer transport protein
FOY96_RS03180	COG2862	Uncharacterized protein family, UPF0114
FOY96_RS03200	COG0625	glutathione transferase activity
FOY96_RS03210	COG0601	transmembrane transport
FOY96_RS03215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS03220	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS03225	COG4608	Belongs to the ABC transporter superfamily
FOY96_RS03230	COG0754	glutathionylspermidine amidase activity
FOY96_RS03240	COG1215	transferase activity, transferring glycosyl groups
FOY96_RS03245	COG0726	polysaccharide deacetylase
FOY96_RS03245	COG1649	PFAM Uncharacterised BCR, COG1649
FOY96_RS03250	COG0457	Tetratricopeptide repeat
FOY96_RS03275	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOY96_RS03275	COG0784	Response regulator, receiver
FOY96_RS03315	COG1811	Na channel or pump
FOY96_RS03320	COG1982	Orn Lys Arg decarboxylase major
FOY96_RS03335	COG3493	citrate carrier protein
FOY96_RS03340	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY96_RS03350	COG3052	prosthetic group binding
FOY96_RS03370	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FOY96_RS03375	COG2211	Major facilitator Superfamily
FOY96_RS03380	COG0741	lytic transglycosylase activity
FOY96_RS03390	COG1194	a g-specific adenine glycosylase
FOY96_RS03400	COG3171	Protein conserved in bacteria
FOY96_RS03410	COG2852	Protein conserved in bacteria
FOY96_RS03415	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOY96_RS03425	COG1872	DUF167
FOY96_RS03430	COG0762	integral membrane protein
FOY96_RS03435	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOY96_RS03440	COG2805	Type II/IV secretion system protein
FOY96_RS03445	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOY96_RS03460	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOY96_RS03465	COG2356	endonuclease I
FOY96_RS03470	COG3091	SprT-like family
FOY96_RS03475	COG2814	Major facilitator Superfamily
FOY96_RS03490	COG1166	arginine decarboxylase activity
FOY96_RS03495	COG0010	Belongs to the arginase family
FOY96_RS03505	COG0501	Belongs to the peptidase M48B family
FOY96_RS03515	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOY96_RS03520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOY96_RS03530	COG0191	fructose-bisphosphate aldolase activity
FOY96_RS03535	COG0668	transmembrane transport
FOY96_RS03540	COG1279	arginine transmembrane transporter activity
FOY96_RS03545	COG2968	Membrane
FOY96_RS03550	COG0583	DNA-binding transcription factor activity
FOY96_RS03555	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOY96_RS03560	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOY96_RS03565	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOY96_RS03575	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FOY96_RS03585	COG0006	proline dipeptidase activity
FOY96_RS03590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY96_RS03595	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY96_RS03600	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOY96_RS03610	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOY96_RS03610	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOY96_RS03615	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS03620	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS03625	COG1737	Transcriptional regulator
FOY96_RS03635	COG1272	protein, Hemolysin III
FOY96_RS03640	COG0354	folic acid binding
FOY96_RS03645	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOY96_RS03660	COG4974	Belongs to the 'phage' integrase family
FOY96_RS03670	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOY96_RS03680	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOY96_RS03685	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FOY96_RS03690	COG4942	peptidase
FOY96_RS03735	COG3842	ATPase activity
FOY96_RS03750	COG4565	transcriptional regulatory protein
FOY96_RS03760	COG3592	Divergent 4Fe-4S mono-cluster
FOY96_RS03765	COG2388	GCN5-related N-acetyl-transferase
FOY96_RS03780	COG0814	amino acid
FOY96_RS03795	COG0183	Belongs to the thiolase family
FOY96_RS03805	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS03810	COG2814	Major facilitator Superfamily
FOY96_RS03815	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
FOY96_RS03820	COG1794	racemase activity, acting on amino acids and derivatives
FOY96_RS03825	COG0583	DNA-binding transcription factor activity
FOY96_RS03835	COG1609	Transcriptional regulator
FOY96_RS03845	COG1609	Transcriptional regulator
FOY96_RS03850	COG0318	PFAM AMP-dependent synthetase and ligase
FOY96_RS03850	COG0204	Acyl-transferase
FOY96_RS03855	COG0477	Major facilitator Superfamily
FOY96_RS03860	COG0667	Aldo Keto reductase
FOY96_RS03870	COG3066	DNA modification
FOY96_RS03875	COG0494	nUDIX hydrolase
FOY96_RS03885	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FOY96_RS03890	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FOY96_RS03895	COG2165	general secretion pathway protein
FOY96_RS03900	COG4795	General secretion pathway protein
FOY96_RS03910	COG4967	type IV pilus modification protein PilV
FOY96_RS03915	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FOY96_RS03925	COG1074	ATP-dependent DNA helicase activity
FOY96_RS03930	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOY96_RS03935	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOY96_RS03935	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOY96_RS03940	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOY96_RS03950	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FOY96_RS03955	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOY96_RS03960	COG2166	iron-sulfur cluster assembly
FOY96_RS03965	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOY96_RS03975	COG0583	DNA-binding transcription factor activity
FOY96_RS03980	COG2363	Small membrane protein
FOY96_RS03985	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FOY96_RS03995	COG1760	l-serine dehydratase
FOY96_RS04000	COG0814	amino acid
FOY96_RS04005	COG1611	Belongs to the LOG family
FOY96_RS04020	COG3098	single-species biofilm formation
FOY96_RS04025	COG0564	pseudouridine synthase activity
FOY96_RS04030	COG0716	FMN binding
FOY96_RS04040	COG2271	Major facilitator Superfamily
FOY96_RS04045	COG4948	Mandelate Racemase Muconate Lactonizing
FOY96_RS04050	COG4948	Mandelate Racemase Muconate Lactonizing
FOY96_RS04055	COG1929	Belongs to the glycerate kinase type-1 family
FOY96_RS04060	COG4999	Histidine kinase
FOY96_RS04060	COG3437	response regulator, receiver
FOY96_RS04060	COG2205	protein histidine kinase activity
FOY96_RS04060	COG3850	Histidine kinase
FOY96_RS04065	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY96_RS04070	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOY96_RS04075	COG3956	TIGRFAM MazG family protein
FOY96_RS04100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS04100	COG2190	(PTS) system
FOY96_RS04100	COG1263	PTS System
FOY96_RS04105	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
FOY96_RS04110	COG0602	queuosine metabolic process
FOY96_RS04115	COG0720	synthase
FOY96_RS04120	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FOY96_RS04125	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY96_RS04135	COG2234	aminopeptidase activity
FOY96_RS04155	COG0529	Catalyzes the synthesis of activated sulfate
FOY96_RS04165	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FOY96_RS04170	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOY96_RS04180	COG0585	pseudouridine synthase activity
FOY96_RS04195	COG1388	LysM domain
FOY96_RS04195	COG4942	peptidase
FOY96_RS04210	COG0477	Major facilitator Superfamily
FOY96_RS04225	COG0163	prenyltransferase activity
FOY96_RS04230	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY96_RS04240	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOY96_RS04260	COG1120	ATPase activity
FOY96_RS04265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS04280	COG0309	Hydrogenase expression formation protein (HypE)
FOY96_RS04285	COG0409	Hydrogenase expression formation protein
FOY96_RS04290	COG0298	carbon dioxide binding
FOY96_RS04295	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FOY96_RS04300	COG0375	protein maturation
FOY96_RS04310	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY96_RS04315	COG0651	ATP synthesis coupled electron transport
FOY96_RS04320	COG0650	Formate hydrogenlyase subunit 4
FOY96_RS04325	COG3261	NADH dehydrogenase
FOY96_RS04325	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FOY96_RS04330	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY96_RS04335	COG3260	NADH ubiquinone oxidoreductase 20
FOY96_RS04345	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FOY96_RS04350	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS04355	COG1263	PTS System
FOY96_RS04355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS04360	COG1609	Transcriptional regulator
FOY96_RS04365	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY96_RS04370	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOY96_RS04375	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY96_RS04380	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOY96_RS04385	COG1773	rubredoxin
FOY96_RS04385	COG0426	domain, Protein
FOY96_RS04390	COG3604	Transcriptional regulator
FOY96_RS04400	COG1349	DNA-binding transcription factor activity
FOY96_RS04405	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS04410	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS04420	COG3732	PTS system glucitol sorbitol-specific
FOY96_RS04425	COG3730	PTS system glucitol sorbitol-specific
FOY96_RS04430	COG2951	lytic endotransglycosylase activity
FOY96_RS04440	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOY96_RS04450	COG1546	Belongs to the CinA family
FOY96_RS04455	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOY96_RS04465	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOY96_RS04470	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FOY96_RS04500	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY96_RS04505	COG1238	metal cluster binding
FOY96_RS04510	COG2918	glutathione biosynthetic process
FOY96_RS04525	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOY96_RS04530	COG2814	Major facilitator Superfamily
FOY96_RS04535	COG1566	PFAM secretion protein HlyD family protein
FOY96_RS04540	COG1846	Transcriptional regulator
FOY96_RS04545	COG2814	Major facilitator Superfamily
FOY96_RS04555	COG4176	ABC-type proline glycine betaine transport system permease component
FOY96_RS04560	COG4175	Glycine betaine
FOY96_RS04570	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOY96_RS04575	COG1780	Probably involved in ribonucleotide reductase function
FOY96_RS04585	COG4575	ribosome binding
FOY96_RS04610	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY96_RS04615	COG0640	Transcriptional regulator
FOY96_RS04620	COG0401	homolog of Blt101
FOY96_RS04625	COG0583	DNA-binding transcription factor activity
FOY96_RS04630	COG0666	response to abiotic stimulus
FOY96_RS04635	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOY96_RS04640	COG1304	FMN binding
FOY96_RS04650	COG0549	Belongs to the carbamate kinase family
FOY96_RS04655	COG0402	S-adenosylhomocysteine deaminase activity
FOY96_RS04660	COG2226	methyltransferase
FOY96_RS04675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY96_RS04695	COG1051	belongs to the nudix hydrolase family
FOY96_RS04700	COG3093	addiction module antidote protein HigA
FOY96_RS04705	COG3549	Plasmid maintenance system killer
FOY96_RS04710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS04785	COG0582	viral genome integration into host DNA
FOY96_RS04800	COG2867	negative regulation of translational initiation
FOY96_RS04820	COG0497	DNA recombination
FOY96_RS04825	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOY96_RS04830	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOY96_RS04835	COG4536	flavin adenine dinucleotide binding
FOY96_RS04840	COG4137	Cytochrome C assembly protein
FOY96_RS04845	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOY96_RS04855	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOY96_RS04860	COG0336	Belongs to the RNA methyltransferase TrmD family
FOY96_RS04880	COG2885	chlorophyll binding
FOY96_RS04885	COG2199	diguanylate cyclase activity
FOY96_RS04900	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY96_RS04905	COG1605	Chorismate mutase
FOY96_RS04905	COG0287	Prephenate dehydrogenase
FOY96_RS04915	COG0077	Prephenate dehydratase
FOY96_RS04915	COG1605	Chorismate mutase
FOY96_RS04925	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOY96_RS04930	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY96_RS04945	COG0542	response to heat
FOY96_RS04970	COG0477	Major facilitator Superfamily
FOY96_RS04975	COG5544	Lipoprotein
FOY96_RS04980	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOY96_RS04985	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS04985	COG0045	succinate-CoA ligase (ADP-forming) activity
FOY96_RS04985	COG1042	CoA-binding domain protein
FOY96_RS04990	COG3148	PFAM DTW domain containing protein
FOY96_RS04995	COG3118	belongs to the thioredoxin family
FOY96_RS05000	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY96_RS05010	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
FOY96_RS05015	COG0513	Belongs to the DEAD box helicase family
FOY96_RS05020	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOY96_RS05025	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOY96_RS05040	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FOY96_RS05050	COG3086	response to oxidative stress
FOY96_RS05060	COG0681	Belongs to the peptidase S26 family
FOY96_RS05070	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOY96_RS05075	COG1381	Involved in DNA repair and RecF pathway recombination
FOY96_RS05080	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOY96_RS05090	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY96_RS05095	COG1737	Transcriptional regulator
FOY96_RS05100	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FOY96_RS05105	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS05105	COG1263	PTS System
FOY96_RS05110	COG0560	Phosphoserine phosphatase
FOY96_RS05120	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOY96_RS05130	COG0047	phosphoribosylformylglycinamidine synthase activity
FOY96_RS05130	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOY96_RS05135	COG2205	protein histidine kinase activity
FOY96_RS05140	COG3170	Tfp pilus assembly protein FimV
FOY96_RS05145	COG2204	response regulator
FOY96_RS05150	COG0347	Belongs to the P(II) protein family
FOY96_RS05155	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY96_RS05155	COG1017	nitric oxide dioxygenase activity
FOY96_RS05165	COG2259	Doxx family
FOY96_RS05170	COG2814	Major facilitator Superfamily
FOY96_RS05175	COG3711	transcriptional antiterminator
FOY96_RS05185	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY96_RS05200	COG1959	2 iron, 2 sulfur cluster binding
FOY96_RS05205	COG1104	cysteine desulfurase activity
FOY96_RS05210	COG0822	iron-sulfur transferase activity
FOY96_RS05215	COG0316	Belongs to the HesB IscA family
FOY96_RS05220	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOY96_RS05225	COG0443	Heat shock 70 kDa protein
FOY96_RS05230	COG0633	Ferredoxin
FOY96_RS05235	COG2975	iron-sulfur cluster assembly
FOY96_RS05240	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY96_RS05250	COG1737	Transcriptional regulator
FOY96_RS05255	COG2897	thiosulfate sulfurtransferase activity
FOY96_RS05265	COG2190	(PTS) system
FOY96_RS05265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS05265	COG1263	PTS System
FOY96_RS05270	COG2373	Large extracellular alpha-helical protein
FOY96_RS05275	COG4953	penicillin-binding protein 1C
FOY96_RS05285	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOY96_RS05300	COG0124	histidyl-tRNA synthetase
FOY96_RS05305	COG2976	Protein conserved in bacteria
FOY96_RS05315	COG1160	GTP binding
FOY96_RS05325	COG1645	bacterial-type flagellum-dependent swarming motility
FOY96_RS05340	COG1570	exodeoxyribonuclease VII activity
FOY96_RS05345	COG0517	IMP dehydrogenase activity
FOY96_RS05345	COG0516	GMP reductase activity
FOY96_RS05365	COG3962	Belongs to the TPP enzyme family
FOY96_RS05370	COG0673	inositol 2-dehydrogenase activity
FOY96_RS05385	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS05390	COG0673	inositol 2-dehydrogenase activity
FOY96_RS05395	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY96_RS05405	COG3718	enzyme involved in inositol metabolism
FOY96_RS05410	COG2814	Major facilitator Superfamily
FOY96_RS05435	COG0583	DNA-binding transcription factor activity
FOY96_RS05445	COG2200	EAL domain
FOY96_RS05460	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOY96_RS05465	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOY96_RS05470	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS05475	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOY96_RS05480	COG2233	PERMEase
FOY96_RS05490	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY96_RS05495	COG1446	asparaginase
FOY96_RS05510	COG1393	Belongs to the ArsC family
FOY96_RS05515	COG4783	chaperone-mediated protein folding
FOY96_RS05520	COG0628	permease
FOY96_RS05525	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOY96_RS05530	COG2716	regulation of RNA biosynthetic process
FOY96_RS05540	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOY96_RS05550	COG2321	neutral zinc metallopeptidase
FOY96_RS05560	COG0400	carboxylic ester hydrolase activity
FOY96_RS05570	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOY96_RS05575	COG1393	Belongs to the ArsC family
FOY96_RS05585	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS05590	COG3850	Histidine kinase
FOY96_RS05595	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY96_RS05595	COG0493	'glutamate synthase
FOY96_RS05600	COG0494	nUDIX hydrolase
FOY96_RS05605	COG5342	invasion associated locus B
FOY96_RS05610	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOY96_RS05625	COG0408	coproporphyrinogen oxidase activity
FOY96_RS05630	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOY96_RS05655	COG2837	iron assimilation
FOY96_RS05660	COG4150	thiosulfate binding
FOY96_RS05665	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FOY96_RS05670	COG4208	sulfate ABC transporter
FOY96_RS05675	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOY96_RS05700	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS05720	COG3115	cell septum assembly
FOY96_RS05725	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOY96_RS05730	COG3530	Putative quorum-sensing-regulated virulence factor
FOY96_RS05735	COG0385	Bile acid
FOY96_RS05740	COG0583	DNA-binding transcription factor activity
FOY96_RS05760	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY96_RS05765	COG3415	Transposase
FOY96_RS05770	COG3415	Transposase
FOY96_RS05780	COG2200	EAL domain
FOY96_RS05780	COG2199	diguanylate cyclase activity
FOY96_RS05785	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOY96_RS05790	COG1914	H( )-stimulated, divalent metal cation uptake system
FOY96_RS05800	COG0667	Aldo Keto reductase
FOY96_RS05805	COG3961	Belongs to the TPP enzyme family
FOY96_RS05815	COG0837	glucose binding
FOY96_RS05820	COG3279	Response regulator of the LytR AlgR family
FOY96_RS05825	COG3275	phosphorelay sensor kinase activity
FOY96_RS05830	COG0436	Aminotransferase
FOY96_RS05840	COG1560	Kdo2-lipid A biosynthetic process
FOY96_RS05865	COG2885	chlorophyll binding
FOY96_RS05890	COG3501	Rhs element vgr protein
FOY96_RS05895	COG3675	Pfam Lipase (class 3)
FOY96_RS05965	COG2116	formate transmembrane transporter activity
FOY96_RS05975	COG2067	long-chain fatty acid transport protein
FOY96_RS05980	COG3691	Protein conserved in bacteria
FOY96_RS05990	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY96_RS05990	COG1024	Enoyl-CoA hydratase
FOY96_RS05995	COG2062	phosphohistidine phosphatase, SixA
FOY96_RS06000	COG2840	Smr protein MutS2
FOY96_RS06020	COG0730	response to heat
FOY96_RS06025	COG3101	peptidyl-lysine hydroxylation
FOY96_RS06035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOY96_RS06035	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOY96_RS06040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY96_RS06055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOY96_RS06060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOY96_RS06065	COG0101	tRNA pseudouridine synthase activity
FOY96_RS06070	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS06080	COG0285	dihydrofolate synthase activity
FOY96_RS06085	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FOY96_RS06090	COG1286	toxin biosynthetic process
FOY96_RS06095	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOY96_RS06100	COG0163	prenyltransferase activity
FOY96_RS06110	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS06120	COG4160	amino acid transport
FOY96_RS06125	COG4598	ABC transporter
FOY96_RS06130	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS06135	COG1090	epimerase
FOY96_RS06140	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOY96_RS06145	COG0625	glutathione transferase activity
FOY96_RS06150	COG0625	glutathione transferase activity
FOY96_RS06155	COG0622	Phosphoesterase
FOY96_RS06165	COG1609	Transcriptional regulator
FOY96_RS06170	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS06180	COG3037	sugar-specific permease SgaT UlaA
FOY96_RS06185	COG3959	Transketolase, thiamine diphosphate binding domain
FOY96_RS06190	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FOY96_RS06215	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY96_RS06220	COG0490	domain, Protein
FOY96_RS06220	COG0471	metal ion transport
FOY96_RS06230	COG0436	Aminotransferase
FOY96_RS06235	COG0583	DNA-binding transcription factor activity
FOY96_RS06240	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY96_RS06270	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOY96_RS06280	COG0839	Belongs to the complex I subunit 6 family
FOY96_RS06285	COG0713	ATP synthesis coupled electron transport
FOY96_RS06290	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOY96_RS06295	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY96_RS06300	COG1007	ATP synthesis coupled electron transport
FOY96_RS06305	COG0784	Response regulator, receiver
FOY96_RS06305	COG0835	chemotaxis
FOY96_RS06310	COG1234	tRNA 3'-trailer cleavage
FOY96_RS06315	COG2153	protein acetylation
FOY96_RS06320	COG4575	ribosome binding
FOY96_RS06325	COG1169	isochorismate synthase
FOY96_RS06330	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOY96_RS06335	COG0596	Alpha beta hydrolase
FOY96_RS06345	COG1441	menaquinone biosynthetic process
FOY96_RS06365	COG0247	lactate metabolic process
FOY96_RS06370	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FOY96_RS06375	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOY96_RS06380	COG2271	Major facilitator Superfamily
FOY96_RS06385	COG0584	glycerophosphoryl diester phosphodiesterase
FOY96_RS06390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY96_RS06405	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOY96_RS06415	COG2205	protein histidine kinase activity
FOY96_RS06415	COG0784	Response regulator, receiver
FOY96_RS06425	COG0642	Histidine kinase
FOY96_RS06425	COG2198	Histidine kinase
FOY96_RS06440	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOY96_RS06440	COG2169	Transcriptional regulator
FOY96_RS06445	COG3145	DNA-N1-methyladenine dioxygenase activity
FOY96_RS06450	COG4615	Cyclic peptide transporter
FOY96_RS06455	COG2239	Acts as a magnesium transporter
FOY96_RS06460	COG0659	secondary active sulfate transmembrane transporter activity
FOY96_RS06465	COG0579	oxidoreductase
FOY96_RS06475	COG3182	Iron-regulated membrane protein
FOY96_RS06580	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY96_RS06590	COG1403	HNH endonuclease
FOY96_RS06660	COG4626	Terminase
FOY96_RS06660	COG1802	Transcriptional regulator
FOY96_RS06665	COG4695	Portal protein
FOY96_RS06670	COG0740	serine-type endopeptidase activity
FOY96_RS06750	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FOY96_RS06750	COG2755	lipolytic protein G-D-S-L family
FOY96_RS06780	COG3082	Protein of unknown function (DUF1414)
FOY96_RS06785	COG3081	Nucleoid-associated protein
FOY96_RS06795	COG1061	Type III restriction enzyme res subunit
FOY96_RS06800	COG1187	pseudouridine synthase activity
FOY96_RS06805	COG2814	Major facilitator Superfamily
FOY96_RS06815	COG4172	Belongs to the ABC transporter superfamily
FOY96_RS06820	COG4239	(ABC) transporter, permease
FOY96_RS06825	COG4174	ABC transporter (Permease)
FOY96_RS06830	COG4166	transmembrane transport
FOY96_RS06835	COG2200	EAL domain
FOY96_RS06840	COG0791	NLP P60 protein
FOY96_RS06845	COG0671	phosphoesterase, PA-phosphatase related
FOY96_RS06850	COG0523	cobalamin synthesis protein
FOY96_RS06855	COG0246	Mannitol dehydrogenase
FOY96_RS06860	COG1312	Catalyzes the dehydration of D-mannonate
FOY96_RS06865	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOY96_RS06880	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS06880	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS06885	COG1105	Belongs to the carbohydrate kinase PfkB family
FOY96_RS06890	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOY96_RS06890	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOY96_RS06890	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FOY96_RS06895	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FOY96_RS06900	COG2855	membrane
FOY96_RS06905	COG0583	DNA-binding transcription factor activity
FOY96_RS06910	COG0833	amino acid
FOY96_RS06915	COG4771	TonB-dependent receptor
FOY96_RS06925	COG0477	Major facilitator Superfamily
FOY96_RS06935	COG2311	Membrane
FOY96_RS06950	COG1129	ABC transporter
FOY96_RS06960	COG0174	glutamine synthetase
FOY96_RS06965	COG2949	membrane
FOY96_RS06970	COG0295	cytidine deaminase activity
FOY96_RS06975	COG1346	cytolysis
FOY96_RS06990	COG2207	Transcriptional regulator
FOY96_RS06995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOY96_RS07000	COG3659	wide pore channel activity
FOY96_RS07015	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS07025	COG1538	Outer membrane efflux protein
FOY96_RS07030	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS07035	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS07045	COG1686	Belongs to the peptidase S11 family
FOY96_RS07055	COG0277	FAD linked oxidase domain protein
FOY96_RS07060	COG1472	Belongs to the glycosyl hydrolase 3 family
FOY96_RS07065	COG1732	Glycine betaine
FOY96_RS07070	COG1174	glycine betaine transport
FOY96_RS07075	COG1125	glycine betaine transport
FOY96_RS07080	COG1174	glycine betaine transport
FOY96_RS07090	COG0789	Transcriptional regulator
FOY96_RS07095	COG3275	phosphorelay sensor kinase activity
FOY96_RS07105	COG4807	Protein conserved in bacteria
FOY96_RS07110	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY96_RS07110	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY96_RS07115	COG0489	protein tyrosine kinase activity
FOY96_RS07125	COG5455	response to cobalt ion
FOY96_RS07130	COG1596	polysaccharide export
FOY96_RS07135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOY96_RS07140	COG3206	protein involved in exopolysaccharide biosynthesis
FOY96_RS07140	COG0489	protein tyrosine kinase activity
FOY96_RS07145	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOY96_RS07150	COG0076	glutamate decarboxylase activity
FOY96_RS07155	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOY96_RS07175	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FOY96_RS07180	COG0351	phosphomethylpyrimidine kinase
FOY96_RS07185	COG2188	Transcriptional regulator
FOY96_RS07190	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY96_RS07195	COG1397	ADP-ribosylglycohydrolase
FOY96_RS07200	COG2211	Major facilitator Superfamily
FOY96_RS07205	COG1830	Aldolase
FOY96_RS07210	COG1597	lipid kinase activity
FOY96_RS07215	COG1683	Conserved Protein
FOY96_RS07220	COG0826	peptidase U32
FOY96_RS07235	COG0745	RESPONSE REGULATOR receiver
FOY96_RS07240	COG2205	protein histidine kinase activity
FOY96_RS07245	COG0477	Major facilitator Superfamily
FOY96_RS07250	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS07255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS07260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS07265	COG0443	Heat shock 70 kDa protein
FOY96_RS07270	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOY96_RS07275	COG5002	protein histidine kinase activity
FOY96_RS07275	COG5001	Diguanylate cyclase
FOY96_RS07275	COG3447	MASE1 domain protein
FOY96_RS07285	COG0717	Belongs to the dCTP deaminase family
FOY96_RS07290	COG2982	Protein involved in outer membrane biogenesis
FOY96_RS07295	COG1253	flavin adenine dinucleotide binding
FOY96_RS07310	COG0489	protein tyrosine kinase activity
FOY96_RS07310	COG3206	protein involved in exopolysaccharide biosynthesis
FOY96_RS07315	COG0463	Glycosyl transferase, family 2
FOY96_RS07320	COG1045	serine acetyltransferase
FOY96_RS07325	COG0438	transferase activity, transferring glycosyl groups
FOY96_RS07335	COG1216	Glycosyl transferase, family 2
FOY96_RS07340	COG0110	maltose O-acetyltransferase activity
FOY96_RS07345	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FOY96_RS07350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY96_RS07355	COG1051	belongs to the nudix hydrolase family
FOY96_RS07360	COG0297	glycogen (starch) synthase activity
FOY96_RS07370	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY96_RS07375	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOY96_RS07380	COG2244	polysaccharide biosynthetic process
FOY96_RS07385	COG2327	Polysaccharide pyruvyl transferase
FOY96_RS07390	COG0438	transferase activity, transferring glycosyl groups
FOY96_RS07410	COG0110	maltose O-acetyltransferase activity
FOY96_RS07420	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOY96_RS07465	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY96_RS07495	COG0107	imidazoleglycerol-phosphate synthase activity
FOY96_RS07500	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOY96_RS07505	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOY96_RS07515	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOY96_RS07525	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOY96_RS07535	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY96_RS07540	COG0583	DNA-binding transcription factor activity
FOY96_RS07550	COG0531	amino acid
FOY96_RS07555	COG2925	Exonuclease
FOY96_RS07565	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FOY96_RS07570	COG1289	transmembrane transporter activity
FOY96_RS07590	COG0534	Mate efflux family protein
FOY96_RS07600	COG0006	proline dipeptidase activity
FOY96_RS07605	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOY96_RS07610	COG0477	Major facilitator Superfamily
FOY96_RS07625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS07635	COG0589	response to stress
FOY96_RS07640	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOY96_RS07645	COG1376	ErfK ybiS ycfS ynhG family protein
FOY96_RS07675	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
FOY96_RS07690	COG0251	oxidation-reduction process
FOY96_RS07755	COG3046	protein related to deoxyribodipyrimidine photolyase
FOY96_RS07760	COG0583	DNA-binding transcription factor activity
FOY96_RS07775	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY96_RS07775	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY96_RS07795	COG4565	transcriptional regulatory protein
FOY96_RS07800	COG3290	protein histidine kinase activity
FOY96_RS07810	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY96_RS07815	COG1418	mRNA catabolic process
FOY96_RS07820	COG0270	DNA (cytosine-5-)-methyltransferase activity
FOY96_RS07825	COG3727	T/G mismatch-specific endonuclease activity
FOY96_RS07830	COG0697	spore germination
FOY96_RS07835	COG2354	Protein conserved in bacteria
FOY96_RS07840	COG5475	Uncharacterized small protein (DUF2158)
FOY96_RS07865	COG2197	response regulator
FOY96_RS07875	COG1987	bacterial-type flagellum assembly
FOY96_RS07915	COG1157	protein secretion by the type III secretion system
FOY96_RS07925	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOY96_RS07935	COG1677	Flagellar hook-basal body complex protein FliE
FOY96_RS07945	COG0366	Alpha amylase catalytic
FOY96_RS07960	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FOY96_RS07985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS07995	COG0765	amino acid transport
FOY96_RS08000	COG1126	abc transporter atp-binding protein
FOY96_RS08005	COG2197	response regulator
FOY96_RS08015	COG2197	response regulator
FOY96_RS08055	COG0411	ABC transporter
FOY96_RS08075	COG3318	Belongs to the UPF0149 family
FOY96_RS08075	COG3012	SEC-C Motif Domain Protein
FOY96_RS08080	COG0814	amino acid
FOY96_RS08090	COG1528	Iron-storage protein
FOY96_RS08110	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOY96_RS08115	COG1528	Iron-storage protein
FOY96_RS08120	COG1879	ABC-type sugar transport system periplasmic component
FOY96_RS08130	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS08140	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FOY96_RS08180	COG1301	dicarboxylic acid transport
FOY96_RS08215	COG0840	transmembrane signaling receptor activity
FOY96_RS08230	COG0745	RESPONSE REGULATOR receiver
FOY96_RS08245	COG3188	usher protein
FOY96_RS08250	COG3121	Chaperone
FOY96_RS08280	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FOY96_RS08285	COG0018	arginyl-trna synthetase
FOY96_RS08290	COG3102	Protein conserved in bacteria
FOY96_RS08295	COG3142	Participates in the control of copper homeostasis
FOY96_RS08300	COG0500	methyltransferase
FOY96_RS08305	COG2226	methyltransferase
FOY96_RS08310	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FOY96_RS08315	COG1801	Protein of unknown function DUF72
FOY96_RS08320	COG1335	isochorismatase
FOY96_RS08330	COG0494	nUDIX hydrolase
FOY96_RS08345	COG0632	four-way junction helicase activity
FOY96_RS08350	COG2255	four-way junction helicase activity
FOY96_RS08355	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOY96_RS08365	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FOY96_RS08370	COG0739	heme binding
FOY96_RS08375	COG1560	Kdo2-lipid A biosynthetic process
FOY96_RS08385	COG1737	Transcriptional regulator
FOY96_RS08390	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOY96_RS08395	COG0129	dihydroxy-acid dehydratase activity
FOY96_RS08400	COG0800	Aldolase
FOY96_RS08410	COG2979	Protein of unknown function (DUF533)
FOY96_RS08415	COG1770	oligopeptidase
FOY96_RS08420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOY96_RS08425	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY96_RS08435	COG2372	response to copper ion
FOY96_RS08440	COG1276	copper resistance
FOY96_RS08455	COG2990	Protein conserved in bacteria
FOY96_RS08470	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FOY96_RS08470	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOY96_RS08475	COG3008	intermembrane lipid transfer
FOY96_RS08480	COG2995	paraquat-inducible protein a
FOY96_RS08485	COG1956	GAF domain-containing protein
FOY96_RS08500	COG0501	Belongs to the peptidase M48B family
FOY96_RS08505	COG2814	Major facilitator Superfamily
FOY96_RS08510	COG1414	Transcriptional regulator
FOY96_RS08545	COG0768	penicillin binding
FOY96_RS08550	COG2226	methyltransferase
FOY96_RS08555	COG1971	Probably functions as a manganese efflux pump
FOY96_RS08560	COG4811	Protein of unknown function (DUF986)
FOY96_RS08565	COG3716	PTS system mannose fructose sorbose family IID component
FOY96_RS08570	COG3715	PTS system
FOY96_RS08575	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS08575	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS08580	COG1253	flavin adenine dinucleotide binding
FOY96_RS08585	COG2200	EAL domain
FOY96_RS08595	COG1760	l-serine dehydratase
FOY96_RS08605	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOY96_RS08615	COG0251	oxidation-reduction process
FOY96_RS08620	COG1199	ATP-dependent helicase activity
FOY96_RS08625	COG1214	PFAM Peptidase M22, glycoprotease
FOY96_RS08630	COG3065	identical protein binding
FOY96_RS08635	COG0318	PFAM AMP-dependent synthetase and ligase
FOY96_RS08640	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FOY96_RS08645	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOY96_RS08650	COG2894	cell division
FOY96_RS08655	COG0850	regulation of cytokinetic process
FOY96_RS08660	COG3100	YcgL domain-containing protein
FOY96_RS08665	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY96_RS08670	COG2983	Belongs to the UPF0260 family
FOY96_RS08680	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOY96_RS08690	COG2719	SpoVR family
FOY96_RS08695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOY96_RS08700	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOY96_RS08705	COG3263	regulation of cellular component size
FOY96_RS08710	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOY96_RS08715	COG0741	lytic transglycosylase activity
FOY96_RS08730	COG4774	siderophore transport
FOY96_RS08745	COG2814	Major facilitator Superfamily
FOY96_RS08765	COG4977	sequence-specific DNA binding
FOY96_RS08780	COG0583	DNA-binding transcription factor activity
FOY96_RS08785	COG0243	molybdopterin cofactor binding
FOY96_RS08895	COG0515	serine threonine protein kinase
FOY96_RS08960	COG0012	GTP binding
FOY96_RS08980	COG0659	secondary active sulfate transmembrane transporter activity
FOY96_RS08990	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOY96_RS08995	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FOY96_RS09000	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FOY96_RS09010	COG2890	protein-(glutamine-N5) methyltransferase activity
FOY96_RS09025	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOY96_RS09030	COG0387	Pfam Sodium calcium exchanger
FOY96_RS09035	COG4572	Cation transport regulator
FOY96_RS09040	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FOY96_RS09050	COG0840	transmembrane signaling receptor activity
FOY96_RS09055	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOY96_RS09060	COG3707	response regulator
FOY96_RS09070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOY96_RS09080	COG1116	anion transmembrane transporter activity
FOY96_RS09085	COG2146	nitrite reductase [NAD(P)H] activity
FOY96_RS09085	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY96_RS09090	COG0243	molybdopterin cofactor binding
FOY96_RS09095	COG4932	domain protein
FOY96_RS09100	COG2197	response regulator
FOY96_RS09105	COG3850	Histidine kinase
FOY96_RS09110	COG2223	nitrite transmembrane transporter activity
FOY96_RS09115	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOY96_RS09120	COG1140	nitrate reductase beta subunit
FOY96_RS09125	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOY96_RS09130	COG2181	nitrate reductase activity
FOY96_RS09135	COG0697	spore germination
FOY96_RS09140	COG1522	sequence-specific DNA binding
FOY96_RS09160	COG0788	formyltetrahydrofolate deformylase activity
FOY96_RS09165	COG3012	SEC-C Motif Domain Protein
FOY96_RS09170	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOY96_RS09175	COG0745	RESPONSE REGULATOR receiver
FOY96_RS09180	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOY96_RS09190	COG1435	thymidine kinase activity
FOY96_RS09195	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS09195	COG1454	alcohol dehydrogenase
FOY96_RS09200	COG2095	MarC family integral membrane protein
FOY96_RS09210	COG0601	transmembrane transport
FOY96_RS09220	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS09225	COG4608	Belongs to the ABC transporter superfamily
FOY96_RS09230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOY96_RS09235	COG3099	Belongs to the UPF0263 family
FOY96_RS09250	COG1280	lysine exporter protein (LysE YggA)
FOY96_RS09260	COG2350	Protein conserved in bacteria
FOY96_RS09285	COG0727	PFAM Uncharacterised protein family (UPF0153)
FOY96_RS09290	COG3047	cAMP biosynthetic process
FOY96_RS09300	COG0425	Belongs to the sulfur carrier protein TusA family
FOY96_RS09305	COG2391	methyltransferase activity
FOY96_RS09310	COG0159	tryptophan synthase activity
FOY96_RS09315	COG0133	tryptophan synthase activity
FOY96_RS09325	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOY96_RS09325	COG0512	Glutamine amidotransferase of anthranilate synthase
FOY96_RS09340	COG0613	PHP domain protein
FOY96_RS09345	COG0009	L-threonylcarbamoyladenylate synthase
FOY96_RS09355	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FOY96_RS09360	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS09365	COG0616	signal peptide processing
FOY96_RS09390	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOY96_RS09400	COG0671	phosphoesterase, PA-phosphatase related
FOY96_RS09405	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FOY96_RS09410	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOY96_RS09415	COG0284	orotidine-5'-phosphate decarboxylase activity
FOY96_RS09420	COG0023	Translation Initiation Factor
FOY96_RS09430	COG1349	DNA-binding transcription factor activity
FOY96_RS09440	COG1024	Enoyl-CoA hydratase
FOY96_RS09445	COG5001	Diguanylate cyclase
FOY96_RS09450	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FOY96_RS09455	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY96_RS09455	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY96_RS09460	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOY96_RS09465	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS09480	COG0745	RESPONSE REGULATOR receiver
FOY96_RS09485	COG5002	protein histidine kinase activity
FOY96_RS09505	COG4171	peptide transport system, permease
FOY96_RS09520	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOY96_RS09525	COG1842	Phage shock protein A
FOY96_RS09535	COG1983	PspC domain protein
FOY96_RS09545	COG0366	Alpha amylase catalytic
FOY96_RS09550	COG1653	transport
FOY96_RS09555	COG1175	transmembrane transport
FOY96_RS09560	COG0395	ABC-type sugar transport system, permease component
FOY96_RS09565	COG1063	alcohol dehydrogenase
FOY96_RS09570	COG1082	Xylose isomerase domain protein TIM barrel
FOY96_RS09575	COG0673	inositol 2-dehydrogenase activity
FOY96_RS09580	COG1554	hydrolase, family 65, central catalytic
FOY96_RS09585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY96_RS09590	COG3842	ATPase activity
FOY96_RS09600	COG1609	Transcriptional regulator
FOY96_RS09605	COG3106	COG3106 Predicted ATPase
FOY96_RS09610	COG3768	UPF0283 membrane protein
FOY96_RS09625	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOY96_RS09630	COG4948	Mandelate Racemase Muconate Lactonizing
FOY96_RS09635	COG2866	Carboxypeptidase
FOY96_RS09640	COG4166	transmembrane transport
FOY96_RS09645	COG0693	protein deglycase activity
FOY96_RS09655	COG3706	GGDEF domain
FOY96_RS09665	COG0840	transmembrane signaling receptor activity
FOY96_RS09680	COG0513	Belongs to the DEAD box helicase family
FOY96_RS09700	COG2200	EAL domain
FOY96_RS09730	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY96_RS09735	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOY96_RS09735	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY96_RS09735	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOY96_RS09735	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOY96_RS09740	COG3042	response to heat
FOY96_RS09745	COG3187	Heat shock protein
FOY96_RS09755	COG1294	oxidase, subunit
FOY96_RS09760	COG1271	oxidase subunit
FOY96_RS09770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY96_RS09775	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOY96_RS09780	COG3842	ATPase activity
FOY96_RS09785	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOY96_RS09790	COG1177	transmembrane transport
FOY96_RS09795	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS09825	COG0747	negative chemotaxis
FOY96_RS09835	COG3238	Protein conserved in bacteria
FOY96_RS09840	COG1247	-acetyltransferase
FOY96_RS09850	COG2130	NADP-dependent
FOY96_RS09855	COG1802	Transcriptional regulator
FOY96_RS09860	COG4772	TonB-dependent receptor
FOY96_RS09875	COG0840	transmembrane signaling receptor activity
FOY96_RS09880	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOY96_RS09880	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOY96_RS09885	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS09890	COG1473	amidohydrolase
FOY96_RS09895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS09900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS09910	COG0765	amino acid transport
FOY96_RS09915	COG1126	abc transporter atp-binding protein
FOY96_RS09920	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS09925	COG0625	glutathione transferase activity
FOY96_RS09930	COG1942	4-Oxalocrotonate Tautomerase
FOY96_RS09935	COG1560	Kdo2-lipid A biosynthetic process
FOY96_RS09950	COG3493	citrate carrier protein
FOY96_RS09970	COG0640	Transcriptional regulator
FOY96_RS09975	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOY96_RS09990	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY96_RS09995	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FOY96_RS10010	COG3158	transport of potassium into the cell
FOY96_RS10060	COG0697	spore germination
FOY96_RS10070	COG0437	4 iron, 4 sulfur cluster binding
FOY96_RS10075	COG2864	formate dehydrogenase
FOY96_RS10095	COG2814	Major facilitator Superfamily
FOY96_RS10105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS10115	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS10130	COG1064	alcohol dehydrogenase
FOY96_RS10135	COG0488	(ABC) transporter
FOY96_RS10145	COG0281	malic enzyme
FOY96_RS10175	COG1764	response to oxidative stress
FOY96_RS10185	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS10190	COG4608	Belongs to the ABC transporter superfamily
FOY96_RS10195	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS10200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS10205	COG0601	transmembrane transport
FOY96_RS10210	COG0747	negative chemotaxis
FOY96_RS10215	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FOY96_RS10230	COG2200	EAL domain
FOY96_RS10260	COG0840	transmembrane signaling receptor activity
FOY96_RS10300	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOY96_RS10305	COG1649	PFAM Uncharacterised BCR, COG1649
FOY96_RS10310	COG4628	conserved protein (DUF2132)
FOY96_RS10315	COG0443	Heat shock 70 kDa protein
FOY96_RS10320	COG2214	Heat shock protein DnaJ domain protein
FOY96_RS10325	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY96_RS10330	COG0583	DNA-binding transcription factor activity
FOY96_RS10345	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOY96_RS10355	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOY96_RS10405	COG2814	Major facilitator Superfamily
FOY96_RS10410	COG0583	DNA-binding transcription factor activity
FOY96_RS10420	COG0745	RESPONSE REGULATOR receiver
FOY96_RS10460	COG0583	DNA-binding transcription factor activity
FOY96_RS10485	COG1349	DNA-binding transcription factor activity
FOY96_RS10490	COG0494	nUDIX hydrolase
FOY96_RS10495	COG2771	luxR family
FOY96_RS10505	COG4106	trans-aconitate 2-methyltransferase activity
FOY96_RS10515	COG2205	protein histidine kinase activity
FOY96_RS10525	COG0596	Alpha beta hydrolase
FOY96_RS10530	COG0456	acetyltransferase
FOY96_RS10545	COG3781	membrane
FOY96_RS10550	COG0246	Mannitol dehydrogenase
FOY96_RS10560	COG3706	GGDEF domain
FOY96_RS10565	COG2199	diguanylate cyclase activity
FOY96_RS10575	COG2066	Belongs to the glutaminase family
FOY96_RS10585	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS10590	COG0583	DNA-binding transcription factor activity
FOY96_RS10610	COG2814	Major facilitator Superfamily
FOY96_RS10620	COG1846	Transcriptional regulator
FOY96_RS10635	COG0697	spore germination
FOY96_RS10640	COG2814	Major facilitator Superfamily
FOY96_RS10645	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOY96_RS10675	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOY96_RS10690	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOY96_RS10705	COG0826	peptidase U32
FOY96_RS10710	COG1396	sequence-specific DNA binding
FOY96_RS10715	COG3135	benzoate transporter
FOY96_RS10735	COG0747	negative chemotaxis
FOY96_RS10740	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOY96_RS10745	COG0500	methyltransferase
FOY96_RS10750	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY96_RS10755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS10760	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
FOY96_RS10770	COG0436	Aminotransferase
FOY96_RS10780	COG2272	Belongs to the type-B carboxylesterase lipase family
FOY96_RS10785	COG5383	Protein conserved in bacteria
FOY96_RS10790	COG3729	General stress protein
FOY96_RS10795	COG3685	Protein conserved in bacteria
FOY96_RS10805	COG3685	Protein conserved in bacteria
FOY96_RS10810	COG3546	catalase activity
FOY96_RS10815	COG1271	oxidase subunit
FOY96_RS10820	COG1294	oxidase, subunit
FOY96_RS10835	COG1546	Belongs to the CinA family
FOY96_RS10850	COG3111	PFAM Bacterial OB fold (BOF) protein
FOY96_RS10855	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS10860	COG0583	DNA-binding transcription factor activity
FOY96_RS10870	COG0840	transmembrane signaling receptor activity
FOY96_RS10885	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOY96_RS10910	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FOY96_RS10930	COG0583	DNA-binding transcription factor activity
FOY96_RS10935	COG0456	acetyltransferase
FOY96_RS10940	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOY96_RS10980	COG1349	DNA-binding transcription factor activity
FOY96_RS10985	COG0673	inositol 2-dehydrogenase activity
FOY96_RS10990	COG3038	cytochrome b561
FOY96_RS10995	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOY96_RS11000	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOY96_RS11015	COG1538	Outer membrane efflux protein
FOY96_RS11020	COG4122	O-methyltransferase activity
FOY96_RS11025	COG1643	Atp-dependent helicase
FOY96_RS11040	COG3122	Protein conserved in bacteria
FOY96_RS11045	COG3157	Type VI secretion system effector, Hcp
FOY96_RS11065	COG0583	DNA-binding transcription factor activity
FOY96_RS11100	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOY96_RS11115	COG0300	oxidoreductase activity
FOY96_RS11140	COG0346	lactoylglutathione lyase activity
FOY96_RS11145	COG1733	regulation of RNA biosynthetic process
FOY96_RS11170	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS11175	COG1902	pentaerythritol trinitrate reductase activity
FOY96_RS11180	COG0583	DNA-binding transcription factor activity
FOY96_RS11210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS11220	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY96_RS11245	COG1846	Transcriptional regulator
FOY96_RS11250	COG2807	transmembrane transport
FOY96_RS11265	COG0386	Belongs to the glutathione peroxidase family
FOY96_RS11270	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOY96_RS11275	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY96_RS11280	COG3327	negative regulation of DNA-templated transcription, initiation
FOY96_RS11285	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FOY96_RS11290	COG0183	Belongs to the thiolase family
FOY96_RS11295	COG2050	protein possibly involved in aromatic compounds catabolism
FOY96_RS11300	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY96_RS11305	COG1024	Enoyl-CoA hydratase
FOY96_RS11310	COG1024	Enoyl-CoA hydratase
FOY96_RS11315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY96_RS11320	COG2151	metal-sulfur cluster biosynthetic enzyme
FOY96_RS11325	COG3396	Phenylacetate-CoA oxygenase
FOY96_RS11330	COG3460	Phenylacetate-CoA oxygenase
FOY96_RS11335	COG3396	Phenylacetate-CoA oxygenase
FOY96_RS11340	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS11340	COG2030	dehydratase
FOY96_RS11350	COG2015	COG2015, Alkyl sulfatase and related hydrolases
FOY96_RS11355	COG3706	GGDEF domain
FOY96_RS11360	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS11365	COG2207	Transcriptional regulator
FOY96_RS11370	COG3784	Protein of unknown function (DUF1318)
FOY96_RS11380	COG2911	Protein conserved in bacteria
FOY96_RS11390	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY96_RS11410	COG5001	Diguanylate cyclase
FOY96_RS11410	COG3300	MHYT domain
FOY96_RS11420	COG4221	oxidoreductase activity
FOY96_RS11425	COG1802	Transcriptional regulator
FOY96_RS11430	COG0589	response to stress
FOY96_RS11440	COG0246	Mannitol dehydrogenase
FOY96_RS11445	COG0477	Major facilitator Superfamily
FOY96_RS11450	COG1063	alcohol dehydrogenase
FOY96_RS11455	COG4948	Mandelate Racemase Muconate Lactonizing
FOY96_RS11460	COG1742	UPF0060 membrane protein
FOY96_RS11470	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS11485	COG0243	molybdopterin cofactor binding
FOY96_RS11490	COG3381	protein complex oligomerization
FOY96_RS11515	COG0745	RESPONSE REGULATOR receiver
FOY96_RS11535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS11540	COG3708	Transcriptional regulator
FOY96_RS11540	COG2207	Transcriptional regulator
FOY96_RS11545	COG3141	response to X-ray
FOY96_RS11550	COG3468	outer membrane autotransporter barrel domain protein
FOY96_RS11555	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOY96_RS11570	COG0625	glutathione transferase activity
FOY96_RS11605	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOY96_RS11610	COG1940	carbohydrate kinase activity
FOY96_RS11615	COG0583	DNA-binding transcription factor activity
FOY96_RS11620	COG2814	Major facilitator Superfamily
FOY96_RS11640	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOY96_RS11655	COG3591	Belongs to the peptidase S1B family
FOY96_RS11660	COG5001	Diguanylate cyclase
FOY96_RS11670	COG2076	Multidrug Resistance protein
FOY96_RS11675	COG0628	permease
FOY96_RS11680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS11685	COG0384	phenazine biosynthesis protein PhzF
FOY96_RS11690	COG1403	HNH endonuclease
FOY96_RS11705	COG3850	Histidine kinase
FOY96_RS11705	COG5002	protein histidine kinase activity
FOY96_RS11725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY96_RS11730	COG0583	DNA-binding transcription factor activity
FOY96_RS11760	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY96_RS11770	COG0667	Aldo Keto reductase
FOY96_RS11780	COG2840	Smr protein MutS2
FOY96_RS11785	COG0583	DNA-binding transcription factor activity
FOY96_RS11800	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FOY96_RS11805	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOY96_RS11825	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FOY96_RS11830	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FOY96_RS11840	COG0531	amino acid
FOY96_RS11845	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS11850	COG3136	membrane protein required for alginate biosynthesis
FOY96_RS11855	COG0745	RESPONSE REGULATOR receiver
FOY96_RS11865	COG2135	peptidase activity
FOY96_RS11875	COG1278	Cold shock
FOY96_RS12045	COG3772	lysozyme
FOY96_RS12055	COG0484	heat shock protein binding
FOY96_RS12060	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
FOY96_RS12095	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOY96_RS12110	COG1846	Transcriptional regulator
FOY96_RS12125	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY96_RS12155	COG0582	viral genome integration into host DNA
FOY96_RS12160	COG2205	protein histidine kinase activity
FOY96_RS12170	COG0114	fumarate hydratase activity
FOY96_RS12175	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY96_RS12175	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY96_RS12180	COG1482	cell wall glycoprotein biosynthetic process
FOY96_RS12185	COG5339	Protein conserved in bacteria
FOY96_RS12190	COG1609	Transcriptional regulator
FOY96_RS12195	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS12195	COG1263	PTS System
FOY96_RS12200	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOY96_RS12205	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FOY96_RS12210	COG0673	inositol 2-dehydrogenase activity
FOY96_RS12250	COG4659	FMN binding
FOY96_RS12260	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOY96_RS12265	COG3104	oligopeptide transport
FOY96_RS12270	COG0625	glutathione transferase activity
FOY96_RS12275	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FOY96_RS12280	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOY96_RS12285	COG0259	pyridoxamine-phosphate oxidase activity
FOY96_RS12290	COG3895	Periplasmic Protein
FOY96_RS12295	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FOY96_RS12305	COG3706	GGDEF domain
FOY96_RS12320	COG1566	PFAM secretion protein HlyD family protein
FOY96_RS12325	COG1289	transmembrane transporter activity
FOY96_RS12330	COG2032	superoxide dismutase activity
FOY96_RS12335	COG4989	oxidoreductase activity
FOY96_RS12340	COG3313	Fe-S protein
FOY96_RS12345	COG2194	sulfuric ester hydrolase activity
FOY96_RS12350	COG1309	transcriptional regulator
FOY96_RS12355	COG1902	pentaerythritol trinitrate reductase activity
FOY96_RS12360	COG0346	lactoylglutathione lyase activity
FOY96_RS12365	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOY96_RS12370	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOY96_RS12375	COG0791	NLP P60 protein
FOY96_RS12385	COG2814	Major facilitator Superfamily
FOY96_RS12400	COG0583	DNA-binding transcription factor activity
FOY96_RS12405	COG2814	Major facilitator Superfamily
FOY96_RS12410	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOY96_RS12415	COG0307	riboflavin synthase, alpha
FOY96_RS12420	COG0534	Mate efflux family protein
FOY96_RS12435	COG4529	Protein conserved in bacteria
FOY96_RS12445	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY96_RS12455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS12465	COG0765	amino acid transport
FOY96_RS12470	COG0765	amino acid transport
FOY96_RS12480	COG1464	Belongs to the NlpA lipoprotein family
FOY96_RS12485	COG2011	ABC-type metal ion transport system permease component
FOY96_RS12500	COG0626	cystathionine gamma-synthase activity
FOY96_RS12515	COG1376	ErfK ybiS ycfS ynhG family protein
FOY96_RS12520	COG2166	iron-sulfur cluster assembly
FOY96_RS12525	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOY96_RS12530	COG0719	Fe-S assembly protein
FOY96_RS12535	COG0396	ATPase activity
FOY96_RS12540	COG0719	Fe-S assembly protein
FOY96_RS12545	COG0316	Belongs to the HesB IscA family
FOY96_RS12555	COG0789	Transcriptional regulator
FOY96_RS12560	COG2200	EAL domain
FOY96_RS12580	COG3383	formate dehydrogenase (NAD+) activity
FOY96_RS12590	COG2050	protein possibly involved in aromatic compounds catabolism
FOY96_RS12595	COG0247	lactate metabolic process
FOY96_RS12595	COG0277	FAD linked oxidase domain protein
FOY96_RS12600	COG0628	permease
FOY96_RS12610	COG1472	Belongs to the glycosyl hydrolase 3 family
FOY96_RS12615	COG2211	Major facilitator Superfamily
FOY96_RS12620	COG0574	Belongs to the PEP-utilizing enzyme family
FOY96_RS12620	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOY96_RS12625	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FOY96_RS12630	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY96_RS12635	COG4256	Hemin uptake protein
FOY96_RS12645	COG3720	iron ion transport
FOY96_RS12650	COG4558	Periplasmic binding protein
FOY96_RS12655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS12665	COG0583	DNA-binding transcription factor activity
FOY96_RS12670	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOY96_RS12675	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOY96_RS12685	COG2610	gluconate transmembrane transporter activity
FOY96_RS12690	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS12695	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOY96_RS12705	COG0791	NLP P60 protein
FOY96_RS12715	COG0386	Belongs to the glutathione peroxidase family
FOY96_RS12725	COG0776	regulation of translation
FOY96_RS12730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY96_RS12730	COG0072	phenylalanine-tRNA ligase activity
FOY96_RS12735	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOY96_RS12750	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOY96_RS12760	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOY96_RS12775	COG3137	Salt-induced outer membrane protein
FOY96_RS12780	COG1105	Belongs to the carbohydrate kinase PfkB family
FOY96_RS12790	COG3001	Fructosamine kinase
FOY96_RS12800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY96_RS12805	COG1988	membrane-bound metal-dependent
FOY96_RS12810	COG1823	symporter activity
FOY96_RS12820	COG0753	catalase activity
FOY96_RS12825	COG3394	polysaccharide catabolic process
FOY96_RS12830	COG1486	melibiose metabolic process
FOY96_RS12835	COG1917	Cupin 2, conserved barrel domain protein
FOY96_RS12835	COG2169	Transcriptional regulator
FOY96_RS12840	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOY96_RS12845	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS12850	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS12855	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY96_RS12860	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FOY96_RS12865	COG0322	excinuclease ABC activity
FOY96_RS12875	COG3678	ATP-independent chaperone mediated protein folding
FOY96_RS12885	COG3724	N-succinylarginine dihydrolase activity
FOY96_RS12890	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS12895	COG3138	arginine N-succinyltransferase
FOY96_RS12905	COG0708	Exodeoxyribonuclease III
FOY96_RS12915	COG4134	Bacterial extracellular solute-binding protein
FOY96_RS12920	COG4135	transport system, permease component
FOY96_RS12925	COG4136	ATPase activity
FOY96_RS12930	COG2897	thiosulfate sulfurtransferase activity
FOY96_RS12935	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOY96_RS12940	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY96_RS12945	COG0494	nUDIX hydrolase
FOY96_RS12960	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOY96_RS12965	COG0709	Synthesizes selenophosphate from selenide and ATP
FOY96_RS12970	COG0778	Nitroreductase
FOY96_RS12975	COG0616	signal peptide processing
FOY96_RS12980	COG0252	asparaginase activity
FOY96_RS12985	COG1335	isochorismatase
FOY96_RS12990	COG3139	Protein of unknown function (DUF1315)
FOY96_RS13010	COG3713	MltA-interacting MipA family protein
FOY96_RS13015	COG2766	serine protein kinase
FOY96_RS13020	COG2718	Belongs to the UPF0229 family
FOY96_RS13025	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY96_RS13035	COG2707	UPF0756 membrane protein
FOY96_RS13040	COG2207	Transcriptional regulator
FOY96_RS13045	COG2807	transmembrane transport
FOY96_RS13050	COG0504	CTP synthase activity
FOY96_RS13055	COG3189	MarR family transcriptional regulator
FOY96_RS13065	COG3042	response to heat
FOY96_RS13070	COG2203	Gaf domain
FOY96_RS13070	COG2199	diguanylate cyclase activity
FOY96_RS13080	COG2261	transglycosylase associated protein
FOY96_RS13085	COG2203	Gaf domain
FOY96_RS13085	COG3706	GGDEF domain
FOY96_RS13085	COG4251	negative regulation of phosphorylation
FOY96_RS13085	COG5001	Diguanylate cyclase
FOY96_RS13090	COG2200	EAL domain
FOY96_RS13110	COG0538	isocitrate dehydrogenase activity
FOY96_RS13115	COG1187	pseudouridine synthase activity
FOY96_RS13130	COG2915	High frequency lysogenization protein hflD homolog
FOY96_RS13135	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOY96_RS13150	COG2850	peptidyl-arginine hydroxylation
FOY96_RS13155	COG1943	Transposase
FOY96_RS13185	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FOY96_RS13190	COG0840	transmembrane signaling receptor activity
FOY96_RS13195	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOY96_RS13205	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOY96_RS13210	COG1136	(ABC) transporter
FOY96_RS13215	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOY96_RS13220	COG4763	Acyl-transferase
FOY96_RS13225	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOY96_RS13230	COG1376	ErfK ybiS ycfS ynhG family protein
FOY96_RS13230	COG1388	LysM domain
FOY96_RS13240	COG1309	transcriptional regulator
FOY96_RS13245	COG3134	Outer membrane lipoprotein
FOY96_RS13250	COG1252	NADH dehydrogenase
FOY96_RS13255	COG3150	esterase
FOY96_RS13270	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FOY96_RS13275	COG5633	Lipoprotein
FOY96_RS13280	COG0537	adenosine 5'-monophosphoramidase activity
FOY96_RS13290	COG0084	hydrolase, TatD family'
FOY96_RS13295	COG0470	DNA polymerase III
FOY96_RS13300	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOY96_RS13305	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOY96_RS13310	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOY96_RS13315	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY96_RS13320	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOY96_RS13335	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOY96_RS13340	COG0416	fatty acid biosynthetic process
FOY96_RS13345	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOY96_RS13355	COG0424	maF-like protein
FOY96_RS13360	COG0564	pseudouridine synthase activity
FOY96_RS13365	COG1530	ribonuclease E activity
FOY96_RS13370	COG0583	DNA-binding transcription factor activity
FOY96_RS13375	COG2814	Major facilitator Superfamily
FOY96_RS13380	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOY96_RS13385	COG1256	bacterial-type flagellum assembly
FOY96_RS13405	COG4786	Flagellar basal body rod
FOY96_RS13415	COG1749	Flagellar hook protein flgE
FOY96_RS13420	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FOY96_RS13425	COG1558	bacterial-type flagellum-dependent cell motility
FOY96_RS13450	COG0728	peptidoglycan biosynthetic process
FOY96_RS13455	COG0673	inositol 2-dehydrogenase activity
FOY96_RS13460	COG3132	Protein of unknown function, DUF480
FOY96_RS13465	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS13470	COG0477	Major facilitator Superfamily
FOY96_RS13480	COG0418	dihydroorotase activity
FOY96_RS13505	COG3038	cytochrome b561
FOY96_RS13510	COG2353	YceI-like domain
FOY96_RS13515	COG1054	Belongs to the UPF0176 family
FOY96_RS13520	COG1560	Kdo2-lipid A biosynthetic process
FOY96_RS13535	COG5645	(Lipo)protein
FOY96_RS13540	COG2943	transferase activity, transferring hexosyl groups
FOY96_RS13555	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FOY96_RS13580	COG2197	response regulator
FOY96_RS13605	COG3381	protein complex oligomerization
FOY96_RS13610	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOY96_RS13615	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOY96_RS13630	COG0583	DNA-binding transcription factor activity
FOY96_RS13640	COG1335	isochorismatase
FOY96_RS13655	COG1702	phosphate starvation-inducible protein PhoH
FOY96_RS13665	COG2822	iron ion transport
FOY96_RS13680	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOY96_RS13690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOY96_RS13695	COG0506	proline dehydrogenase activity
FOY96_RS13695	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOY96_RS13695	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOY96_RS13705	COG1309	transcriptional regulator
FOY96_RS13710	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS13715	COG1335	isochorismatase
FOY96_RS13720	COG0251	oxidation-reduction process
FOY96_RS13725	COG2267	carboxylic ester hydrolase activity
FOY96_RS13730	COG0778	Nitroreductase
FOY96_RS13735	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY96_RS13740	COG2233	PERMEase
FOY96_RS13750	COG3729	General stress protein
FOY96_RS13755	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOY96_RS13780	COG1733	regulation of RNA biosynthetic process
FOY96_RS13785	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS13790	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS13795	COG2239	Acts as a magnesium transporter
FOY96_RS13805	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOY96_RS13810	COG1126	abc transporter atp-binding protein
FOY96_RS13815	COG0765	amino acid transport
FOY96_RS13895	COG1953	Uracil, thiamine, allantoin
FOY96_RS13900	COG0402	S-adenosylhomocysteine deaminase activity
FOY96_RS13905	COG2351	hydroxyisourate hydrolase activity
FOY96_RS13915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY96_RS13940	COG1696	Membrane protein involved in D-alanine export
FOY96_RS13945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY96_RS13975	COG0670	Belongs to the BI1 family
FOY96_RS14015	COG2920	part of a sulfur-relay system
FOY96_RS14020	COG1254	Belongs to the acylphosphatase family
FOY96_RS14030	COG1881	PFAM PEBP family protein
FOY96_RS14035	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOY96_RS14045	COG1832	CoA-binding protein
FOY96_RS14050	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FOY96_RS14055	COG1803	Methylglyoxal synthase
FOY96_RS14060	COG0210	DNA helicase
FOY96_RS14065	COG3304	Inner membrane component domain
FOY96_RS14070	COG1289	transmembrane transporter activity
FOY96_RS14075	COG3070	regulator of competence-specific genes
FOY96_RS14080	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
FOY96_RS14090	COG3120	sequence-specific DNA binding
FOY96_RS14095	COG1067	ATP-dependent peptidase activity
FOY96_RS14105	COG3130	regulation of translation
FOY96_RS14110	COG3009	Protein conserved in bacteria
FOY96_RS14115	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOY96_RS14115	COG3008	intermembrane lipid transfer
FOY96_RS14120	COG2995	paraquat-inducible protein a
FOY96_RS14125	COG0488	(ABC) transporter
FOY96_RS14130	COG0116	Belongs to the methyltransferase superfamily
FOY96_RS14130	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOY96_RS14135	COG0633	Ferredoxin
FOY96_RS14135	COG3217	Mosc domain protein beta barrel domain protein
FOY96_RS14145	COG0167	dihydroorotate dehydrogenase activity
FOY96_RS14155	COG0431	NADPH-dependent FMN reductase
FOY96_RS14160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOY96_RS14165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY96_RS14170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOY96_RS14180	COG0308	aminopeptidase N
FOY96_RS14185	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOY96_RS14190	COG0017	Asparaginyl-tRNA synthetase
FOY96_RS14200	COG1448	Aminotransferase
FOY96_RS14205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY96_RS14210	COG3108	Peptidase M15
FOY96_RS14215	COG2989	Protein conserved in bacteria
FOY96_RS14220	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FOY96_RS14225	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FOY96_RS14235	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOY96_RS14240	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOY96_RS14245	COG3173	Aminoglycoside phosphotransferase
FOY96_RS14250	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOY96_RS14255	COG2835	tetraacyldisaccharide 4'-kinase activity
FOY96_RS14260	COG3214	Protein conserved in bacteria
FOY96_RS14275	COG2333	competence protein COMEC
FOY96_RS14275	COG0658	competence protein
FOY96_RS14280	COG0776	regulation of translation
FOY96_RS14285	COG0539	negative regulation of cytoplasmic translation
FOY96_RS14290	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOY96_RS14295	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOY96_RS14300	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOY96_RS14305	COG2323	membrane
FOY96_RS14310	COG1944	ATP diphosphatase activity
FOY96_RS14315	COG2116	formate transmembrane transporter activity
FOY96_RS14320	COG1882	Formate acetyltransferase
FOY96_RS14325	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY96_RS14335	COG0477	Major facilitator Superfamily
FOY96_RS14340	COG3302	dmso reductase anchor subunit
FOY96_RS14345	COG0437	4 iron, 4 sulfur cluster binding
FOY96_RS14350	COG0243	molybdopterin cofactor binding
FOY96_RS14355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOY96_RS14360	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOY96_RS14365	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOY96_RS14370	COG1674	ftsk spoiiie
FOY96_RS14370	COG1178	ABC-type Fe3 transport system permease component
FOY96_RS14385	COG0492	ferredoxin-NADP+ reductase activity
FOY96_RS14390	COG4988	ABC transporter
FOY96_RS14395	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOY96_RS14400	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOY96_RS14405	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOY96_RS14415	COG0737	Belongs to the 5'-nucleotidase family
FOY96_RS14430	COG0542	response to heat
FOY96_RS14435	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOY96_RS14440	COG1278	Cold shock
FOY96_RS14450	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS14455	COG2990	Protein conserved in bacteria
FOY96_RS14460	COG3593	DNA synthesis involved in DNA repair
FOY96_RS14470	COG2431	L-lysine efflux transmembrane transporter activity
FOY96_RS14475	COG1151	hydroxylamine reductase activity
FOY96_RS14480	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY96_RS14490	COG0028	Belongs to the TPP enzyme family
FOY96_RS14495	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FOY96_RS14500	COG0702	epimerase
FOY96_RS14505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY96_RS14525	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOY96_RS14550	COG2165	general secretion pathway protein
FOY96_RS14560	COG2165	general secretion pathway protein
FOY96_RS14565	COG1459	type II secretion system
FOY96_RS14570	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOY96_RS14575	COG1450	Type ii and iii secretion system protein
FOY96_RS14595	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOY96_RS14600	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOY96_RS14605	COG0393	Putative heavy-metal-binding
FOY96_RS14615	COG1126	abc transporter atp-binding protein
FOY96_RS14620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS14625	COG4215	(ABC) transporter
FOY96_RS14630	COG4160	amino acid transport
FOY96_RS14635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS14640	COG5002	protein histidine kinase activity
FOY96_RS14645	COG0745	RESPONSE REGULATOR receiver
FOY96_RS14650	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY96_RS14660	COG1177	transmembrane transport
FOY96_RS14665	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOY96_RS14670	COG3842	ATPase activity
FOY96_RS14675	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOY96_RS14690	COG0189	ligase activity
FOY96_RS14695	COG0778	Nitroreductase
FOY96_RS14710	COG0569	domain protein
FOY96_RS14710	COG2985	domain, Protein
FOY96_RS14715	COG0640	Transcriptional regulator
FOY96_RS14720	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOY96_RS14725	COG1393	Belongs to the ArsC family
FOY96_RS14735	COG3226	Transcriptional regulator
FOY96_RS14740	COG0738	Major facilitator superfamily
FOY96_RS14745	COG0561	phosphatase activity
FOY96_RS14750	COG2814	Major facilitator Superfamily
FOY96_RS14760	COG0671	phosphoesterase, PA-phosphatase related
FOY96_RS14765	COG1349	DNA-binding transcription factor activity
FOY96_RS14770	COG1686	Belongs to the peptidase S11 family
FOY96_RS14775	COG0625	glutathione transferase activity
FOY96_RS14780	COG2133	pyrroloquinoline quinone binding
FOY96_RS14815	COG1446	asparaginase
FOY96_RS14825	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOY96_RS14830	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOY96_RS14835	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY96_RS14840	COG1882	Formate acetyltransferase
FOY96_RS14845	COG0561	phosphatase activity
FOY96_RS14855	COG1609	Transcriptional regulator
FOY96_RS14860	COG2271	Major facilitator Superfamily
FOY96_RS14870	COG0488	(ABC) transporter
FOY96_RS14875	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOY96_RS14930	COG1376	ErfK ybiS ycfS ynhG family protein
FOY96_RS14935	COG2188	Transcriptional regulator
FOY96_RS14940	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS14945	COG2723	6-phospho-beta-galactosidase activity
FOY96_RS14950	COG0667	Aldo Keto reductase
FOY96_RS14960	COG2814	Major facilitator Superfamily
FOY96_RS14965	COG1566	PFAM secretion protein HlyD family protein
FOY96_RS14970	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOY96_RS14975	COG1321	iron dependent repressor
FOY96_RS14985	COG2194	sulfuric ester hydrolase activity
FOY96_RS14990	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOY96_RS15000	COG0783	Belongs to the Dps family
FOY96_RS15010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY96_RS15015	COG0765	amino acid transport
FOY96_RS15020	COG1126	abc transporter atp-binding protein
FOY96_RS15025	COG0668	transmembrane transport
FOY96_RS15030	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FOY96_RS15040	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOY96_RS15050	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOY96_RS15080	COG1199	ATP-dependent helicase activity
FOY96_RS15085	COG0513	Belongs to the DEAD box helicase family
FOY96_RS15090	COG1309	transcriptional regulator
FOY96_RS15095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS15100	COG1131	(ABC) transporter
FOY96_RS15105	COG0842	Transport permease protein
FOY96_RS15110	COG0842	Transport permease protein
FOY96_RS15120	COG3568	Endonuclease Exonuclease Phosphatase
FOY96_RS15125	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOY96_RS15130	COG0392	lysyltransferase activity
FOY96_RS15135	COG0670	Belongs to the BI1 family
FOY96_RS15140	COG0314	molybdopterin synthase activity
FOY96_RS15145	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FOY96_RS15150	COG0315	cyclic pyranopterin monophosphate synthase activity
FOY96_RS15155	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOY96_RS15180	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOY96_RS15185	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOY96_RS15195	COG0156	8-amino-7-oxononanoate synthase activity
FOY96_RS15200	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOY96_RS15205	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOY96_RS15210	COG1881	PFAM PEBP family protein
FOY96_RS15215	COG2986	histidine ammonia-lyase
FOY96_RS15220	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOY96_RS15230	COG0010	Belongs to the arginase family
FOY96_RS15240	COG4677	pectinesterase activity
FOY96_RS15245	COG2706	6-phosphogluconolactonase activity
FOY96_RS15250	COG0561	phosphatase activity
FOY96_RS15260	COG4149	molybdate abc transporter
FOY96_RS15265	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOY96_RS15275	COG3585	molybdate ion transport
FOY96_RS15275	COG2005	Transcriptional regulator
FOY96_RS15280	COG1119	ATPase activity
FOY96_RS15285	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOY96_RS15290	COG1085	galactose-1-phosphate uridylyltransferase
FOY96_RS15295	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FOY96_RS15300	COG2017	converts alpha-aldose to the beta-anomer
FOY96_RS15310	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY96_RS15320	COG1230	cation diffusion facilitator family transporter
FOY96_RS15325	COG3201	nicotinamide mononucleotide transporter
FOY96_RS15330	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FOY96_RS15340	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FOY96_RS15345	COG2885	chlorophyll binding
FOY96_RS15355	COG3064	Membrane
FOY96_RS15360	COG0848	biopolymer transport protein
FOY96_RS15365	COG0811	peptide transport
FOY96_RS15370	COG0824	Thioesterase
FOY96_RS15375	COG3790	cyd operon protein YbgE
FOY96_RS15380	COG4890	Cyd operon protein YbgT
FOY96_RS15385	COG1294	oxidase, subunit
FOY96_RS15390	COG1271	oxidase subunit
FOY96_RS15395	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOY96_RS15400	COG0045	succinate-CoA ligase (ADP-forming) activity
FOY96_RS15405	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOY96_RS15410	COG0567	Dehydrogenase, E1 component
FOY96_RS15415	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOY96_RS15420	COG1053	succinate dehydrogenase
FOY96_RS15425	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOY96_RS15430	COG2009	succinate dehydrogenase
FOY96_RS15435	COG0372	Belongs to the citrate synthase family
FOY96_RS15440	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOY96_RS15450	COG1984	allophanate hydrolase subunit 2
FOY96_RS15455	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOY96_RS15460	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOY96_RS15465	COG0415	Belongs to the DNA photolyase family
FOY96_RS15480	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FOY96_RS15485	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FOY96_RS15490	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FOY96_RS15495	COG2205	protein histidine kinase activity
FOY96_RS15500	COG0745	RESPONSE REGULATOR receiver
FOY96_RS15510	COG1982	Orn Lys Arg decarboxylase major
FOY96_RS15515	COG0531	amino acid
FOY96_RS15520	COG0033	Phosphoglucomutase
FOY96_RS15525	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FOY96_RS15530	COG0596	Alpha beta hydrolase
FOY96_RS15550	COG0735	belongs to the Fur family
FOY96_RS15565	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY96_RS15570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS15570	COG2190	(PTS) system
FOY96_RS15570	COG1263	PTS System
FOY96_RS15580	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOY96_RS15585	COG1940	carbohydrate kinase activity
FOY96_RS15585	COG1846	Transcriptional regulator
FOY96_RS15590	COG0647	UMP catabolic process
FOY96_RS15595	COG0367	asparagine synthase
FOY96_RS15635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY96_RS15640	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOY96_RS15645	COG1702	phosphate starvation-inducible protein PhoH
FOY96_RS15650	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOY96_RS15655	COG4535	Mg2 and Co2 transporter CorC
FOY96_RS15670	COG0765	amino acid transport
FOY96_RS15675	COG0765	amino acid transport
FOY96_RS15680	COG1126	abc transporter atp-binding protein
FOY96_RS15685	COG1957	nucleoside hydrolase
FOY96_RS15690	COG2888	peptidyl-tyrosine sulfation
FOY96_RS15705	COG1466	dna polymerase III delta subunit
FOY96_RS15715	COG0799	negative regulation of ribosome biogenesis
FOY96_RS15725	COG0768	penicillin binding
FOY96_RS15730	COG0772	Belongs to the SEDS family
FOY96_RS15735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOY96_RS15740	COG1686	Belongs to the peptidase S11 family
FOY96_RS15745	COG2921	Belongs to the UPF0250 family
FOY96_RS15750	COG0321	lipoyl(octanoyl) transferase activity
FOY96_RS15755	COG0583	DNA-binding transcription factor activity
FOY96_RS15765	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOY96_RS15770	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOY96_RS15775	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY96_RS15780	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOY96_RS15795	COG3069	C4-dicarboxylate transmembrane transporter activity
FOY96_RS15800	COG3719	Belongs to the RNase T2 family
FOY96_RS15805	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY96_RS15810	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOY96_RS15815	COG1063	alcohol dehydrogenase
FOY96_RS15835	COG0583	DNA-binding transcription factor activity
FOY96_RS15840	COG3969	phosphoadenosine phosphosulfate
FOY96_RS15845	COG1475	DNA binding
FOY96_RS15850	COG0436	Aminotransferase
FOY96_RS15855	COG0235	Class ii aldolase
FOY96_RS15860	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
FOY96_RS15880	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
FOY96_RS15895	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS15900	COG1129	ABC transporter
FOY96_RS15905	COG0371	Dehydrogenase
FOY96_RS15925	COG2879	small protein
FOY96_RS15930	COG1966	Carbon starvation protein
FOY96_RS15935	COG2050	protein possibly involved in aromatic compounds catabolism
FOY96_RS15940	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS15945	COG3433	isochorismatase activity
FOY96_RS15945	COG1535	isochorismatase
FOY96_RS15950	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOY96_RS15955	COG1169	isochorismate synthase
FOY96_RS15960	COG4592	Periplasmic binding protein
FOY96_RS15970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS15975	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS15980	COG1120	ATPase activity
FOY96_RS15985	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FOY96_RS15985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY96_RS15990	COG3251	PFAM MbtH domain protein
FOY96_RS15995	COG2382	esterase
FOY96_RS16000	COG4771	TonB-dependent receptor
FOY96_RS16005	COG2977	Belongs to the P-Pant transferase superfamily
FOY96_RS16035	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOY96_RS16055	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FOY96_RS16070	COG4221	oxidoreductase activity
FOY96_RS16090	COG0601	transmembrane transport
FOY96_RS16095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS16100	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS16145	COG0583	DNA-binding transcription factor activity
FOY96_RS16155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY96_RS16190	COG1566	PFAM secretion protein HlyD family protein
FOY96_RS16200	COG1289	transmembrane transporter activity
FOY96_RS16205	COG2207	Transcriptional regulator
FOY96_RS16215	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FOY96_RS16255	COG2315	Protein conserved in bacteria
FOY96_RS16260	COG0778	Nitroreductase
FOY96_RS16270	COG2831	hemolysin activation secretion protein
FOY96_RS16290	COG3539	Fimbrial protein
FOY96_RS16300	COG3188	usher protein
FOY96_RS16310	COG3539	Fimbrial protein
FOY96_RS16320	COG3121	Chaperone
FOY96_RS16340	COG0477	Major facilitator Superfamily
FOY96_RS16345	COG0668	transmembrane transport
FOY96_RS16350	COG1113	amino acid transport
FOY96_RS16445	COG2501	S4 domain
FOY96_RS16450	COG2190	(PTS) system
FOY96_RS16450	COG1263	PTS System
FOY96_RS16450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS16455	COG1609	Transcriptional regulator
FOY96_RS16460	COG1988	membrane-bound metal-dependent
FOY96_RS16470	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOY96_RS16475	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY96_RS16490	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOY96_RS16495	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOY96_RS16510	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOY96_RS16515	COG4181	ATPase activity
FOY96_RS16520	COG2755	lipolytic protein G-D-S-L family
FOY96_RS16525	COG0300	oxidoreductase activity
FOY96_RS16530	COG3118	belongs to the thioredoxin family
FOY96_RS16535	COG0390	transport system, permease component
FOY96_RS16540	COG4619	ABC transporter
FOY96_RS16550	COG0330	HflC and HflK could
FOY96_RS16555	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOY96_RS16570	COG3735	TraB family
FOY96_RS16575	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY96_RS16585	COG2223	nitrite transmembrane transporter activity
FOY96_RS16590	COG4651	solute:proton antiporter activity
FOY96_RS16590	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY96_RS16595	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY96_RS16600	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOY96_RS16610	COG0326	Molecular chaperone. Has ATPase activity
FOY96_RS16615	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FOY96_RS16620	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FOY96_RS16630	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOY96_RS16635	COG2832	Protein of unknown function (DUF454)
FOY96_RS16640	COG3923	Primosomal replication protein n
FOY96_RS16650	COG3264	Mechanosensitive ion channel
FOY96_RS16650	COG1196	nuclear chromosome segregation
FOY96_RS16655	COG1309	transcriptional regulator
FOY96_RS16660	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS16665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY96_RS16680	COG0110	maltose O-acetyltransferase activity
FOY96_RS16700	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOY96_RS16710	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOY96_RS16730	COG1609	Transcriptional regulator
FOY96_RS16735	COG2364	Membrane
FOY96_RS16740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY96_RS16760	COG3695	enzyme binding
FOY96_RS16765	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FOY96_RS16770	COG1946	Acyl-CoA thioesterase
FOY96_RS16775	COG0004	ammonium transporteR
FOY96_RS16780	COG0347	Belongs to the P(II) protein family
FOY96_RS16790	COG1132	(ABC) transporter
FOY96_RS16795	COG1132	(ABC) transporter
FOY96_RS16800	COG1522	sequence-specific DNA binding
FOY96_RS16810	COG0561	phosphatase activity
FOY96_RS16815	COG4533	DNA binding
FOY96_RS16820	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOY96_RS16830	COG3657	addiction module killer protein
FOY96_RS16835	COG0824	Thioesterase
FOY96_RS16840	COG1555	photosystem II stabilization
FOY96_RS16845	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY96_RS16850	COG0776	regulation of translation
FOY96_RS16855	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOY96_RS16860	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOY96_RS16870	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOY96_RS16875	COG0271	Belongs to the BolA IbaG family
FOY96_RS16880	COG3056	Lipoprotein
FOY96_RS16885	COG2223	nitrite transmembrane transporter activity
FOY96_RS16890	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOY96_RS16895	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOY96_RS16900	COG1845	cytochrome c oxidase, subunit III
FOY96_RS16905	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOY96_RS16910	COG0109	protoheme IX farnesyltransferase activity
FOY96_RS16915	COG2814	Major facilitator Superfamily
FOY96_RS16925	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOY96_RS16930	COG0693	protein deglycase activity
FOY96_RS16945	COG0142	geranyltranstransferase activity
FOY96_RS16950	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FOY96_RS16955	COG0667	Aldo Keto reductase
FOY96_RS16960	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FOY96_RS16965	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOY96_RS16970	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOY96_RS16975	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOY96_RS16975	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOY96_RS16980	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOY96_RS16985	COG4238	major outer membrane lipoprotein
FOY96_RS17005	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOY96_RS17010	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOY96_RS17015	COG1862	Preprotein translocase
FOY96_RS17030	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FOY96_RS17035	COG0450	alkyl hydroperoxide reductase
FOY96_RS17050	COG0366	Alpha amylase catalytic
FOY96_RS17065	COG5002	protein histidine kinase activity
FOY96_RS17075	COG0420	3'-5' exonuclease activity
FOY96_RS17080	COG0419	ATPase involved in DNA repair
FOY96_RS17085	COG1940	carbohydrate kinase activity
FOY96_RS17095	COG3123	guanosine phosphorylase activity
FOY96_RS17100	COG4126	flavin adenine dinucleotide binding
FOY96_RS17110	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOY96_RS17115	COG1671	Belongs to the UPF0178 family
FOY96_RS17120	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOY96_RS17125	COG3706	GGDEF domain
FOY96_RS17135	COG1785	Belongs to the alkaline phosphatase family
FOY96_RS17155	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOY96_RS17175	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FOY96_RS17185	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOY96_RS17195	COG3468	outer membrane autotransporter barrel domain protein
FOY96_RS17200	COG0113	porphobilinogen synthase activity
FOY96_RS17210	COG2175	clavaminate synthase activity
FOY96_RS17215	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOY96_RS17220	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOY96_RS17225	COG4521	taurine ABC transporter
FOY96_RS17230	COG2040	homocysteine
FOY96_RS17235	COG0833	amino acid
FOY96_RS17240	COG0628	permease
FOY96_RS17270	COG5001	Diguanylate cyclase
FOY96_RS17270	COG3300	MHYT domain
FOY96_RS17295	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOY96_RS17300	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOY96_RS17305	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY96_RS17315	COG1073	alpha beta
FOY96_RS17325	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOY96_RS17330	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOY96_RS17335	COG2991	Protein conserved in bacteria
FOY96_RS17350	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOY96_RS17355	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOY96_RS17370	COG3034	peptidoglycan biosynthetic process
FOY96_RS17375	COG0121	glutamine amidotransferase
FOY96_RS17385	COG1960	acyl-CoA dehydrogenase activity
FOY96_RS17390	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY96_RS17400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY96_RS17415	COG4608	Belongs to the ABC transporter superfamily
FOY96_RS17420	COG0444	Belongs to the ABC transporter superfamily
FOY96_RS17445	COG2226	methyltransferase
FOY96_RS17450	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY96_RS17455	COG1388	LysM domain
FOY96_RS17455	COG0741	lytic transglycosylase activity
FOY96_RS17460	COG2226	methyltransferase
FOY96_RS17465	COG3021	interspecies interaction between organisms
FOY96_RS17475	COG0583	DNA-binding transcription factor activity
FOY96_RS17515	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOY96_RS17525	COG2011	ABC-type metal ion transport system permease component
FOY96_RS17530	COG1464	Belongs to the NlpA lipoprotein family
FOY96_RS17540	COG1720	tRNA m6t6A37 methyltransferase activity
FOY96_RS17550	COG3015	lipoprotein NlpE involved in copper resistance
FOY96_RS17555	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FOY96_RS17570	COG4568	rho-dependent transcription termination
FOY96_RS17575	COG0037	tRNA processing
FOY96_RS17580	COG0346	lactoylglutathione lyase activity
FOY96_RS17585	COG1982	Orn Lys Arg decarboxylase major
FOY96_RS17600	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOY96_RS17605	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY96_RS17610	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY96_RS17615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOY96_RS17620	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY96_RS17630	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY96_RS17635	COG0750	zinc metalloprotease
FOY96_RS17640	COG0575	Belongs to the CDS family
FOY96_RS17650	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOY96_RS17665	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOY96_RS17695	COG3835	regulator
FOY96_RS17705	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOY96_RS17710	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOY96_RS17720	COG2860	membrane
FOY96_RS17725	COG0316	Belongs to the HesB IscA family
FOY96_RS17735	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOY96_RS17740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY96_RS17745	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOY96_RS17750	COG1120	ATPase activity
FOY96_RS17755	COG4774	siderophore transport
FOY96_RS17760	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOY96_RS17765	COG1643	Atp-dependent helicase
FOY96_RS17770	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOY96_RS17775	COG1489	DNA binding
FOY96_RS17785	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY96_RS17790	COG0617	tRNA 3'-terminal CCA addition
FOY96_RS17795	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOY96_RS17800	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOY96_RS17805	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOY96_RS17810	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FOY96_RS17815	COG0726	polysaccharide deacetylase
FOY96_RS17820	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS17825	COG0842	Transport permease protein
FOY96_RS17830	COG1131	(ABC) transporter
FOY96_RS17835	COG0288	reversible hydration of carbon dioxide
FOY96_RS17845	COG4993	Dehydrogenase
FOY96_RS17860	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOY96_RS17875	COG1049	propionate catabolic process, 2-methylcitrate cycle
FOY96_RS17880	COG3064	Membrane
FOY96_RS17890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOY96_RS17895	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOY96_RS17900	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOY96_RS17905	COG2186	Transcriptional regulator
FOY96_RS17915	COG1113	amino acid transport
FOY96_RS17920	COG2211	Major facilitator Superfamily
FOY96_RS17925	COG3940	Belongs to the glycosyl hydrolase 43 family
FOY96_RS17930	COG3725	Membrane protein required for beta-lactamase induction
FOY96_RS17935	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOY96_RS17945	COG4969	Belongs to the N-Me-Phe pilin family
FOY96_RS17950	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOY96_RS17955	COG1459	type II secretion system
FOY96_RS17960	COG0516	GMP reductase activity
FOY96_RS17970	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOY96_RS17975	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FOY96_RS17980	COG0494	nUDIX hydrolase
FOY96_RS17985	COG0653	protein targeting
FOY96_RS17995	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FOY96_RS18000	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOY96_RS18005	COG0849	cell division
FOY96_RS18015	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOY96_RS18030	COG0772	Belongs to the SEDS family
FOY96_RS18040	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOY96_RS18045	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOY96_RS18050	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOY96_RS18055	COG0768	penicillin binding
FOY96_RS18070	COG2001	Belongs to the MraZ family
FOY96_RS18075	COG1609	Transcriptional regulator
FOY96_RS18080	COG0440	acetolactate synthase activity
FOY96_RS18085	COG0028	Belongs to the TPP enzyme family
FOY96_RS18100	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOY96_RS18120	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOY96_RS18130	COG2814	Major facilitator Superfamily
FOY96_RS18150	COG1178	ABC-type Fe3 transport system permease component
FOY96_RS18160	COG0586	Pfam SNARE associated Golgi protein
FOY96_RS18170	COG1069	ribulokinase activity
FOY96_RS18175	COG2160	L-arabinose isomerase activity
FOY96_RS18180	COG0235	Class ii aldolase
FOY96_RS18185	COG0417	DNA replication proofreading
FOY96_RS18190	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOY96_RS18195	COG0564	pseudouridine synthase activity
FOY96_RS18200	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOY96_RS18205	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FOY96_RS18210	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY96_RS18215	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOY96_RS18225	COG2967	ApaG domain
FOY96_RS18230	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOY96_RS18240	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY96_RS18240	COG0475	glutathione-regulated potassium exporter activity
FOY96_RS18245	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY96_RS18260	COG0505	Belongs to the CarA family
FOY96_RS18265	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FOY96_RS18270	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOY96_RS18275	COG1047	Peptidyl-prolyl cis-trans
FOY96_RS18290	COG0196	riboflavin kinase activity
FOY96_RS18300	COG0268	Binds directly to 16S ribosomal RNA
FOY96_RS18305	COG0583	DNA-binding transcription factor activity
FOY96_RS18310	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOY96_RS18325	COG1584	GPR1 FUN34 yaaH family protein
FOY96_RS18330	COG0477	Major facilitator Superfamily
FOY96_RS18335	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOY96_RS18345	COG1115	amino acid carrier protein
FOY96_RS18350	COG3022	response to hydroperoxide
FOY96_RS18360	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FOY96_RS18370	COG0460	homoserine dehydrogenase
FOY96_RS18370	COG0527	aspartate kinase activity
FOY96_RS18380	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FOY96_RS18390	COG0745	RESPONSE REGULATOR receiver
FOY96_RS18395	COG4452	Inner membrane protein CreD
FOY96_RS18400	COG2205	protein histidine kinase activity
FOY96_RS18405	COG0745	RESPONSE REGULATOR receiver
FOY96_RS18410	COG3045	CreA protein
FOY96_RS18415	COG3708	Transcriptional regulator
FOY96_RS18415	COG2207	Transcriptional regulator
FOY96_RS18420	COG0406	alpha-ribazole phosphatase activity
FOY96_RS18425	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOY96_RS18430	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
FOY96_RS18435	COG0741	lytic transglycosylase activity
FOY96_RS18440	COG0488	(ABC) transporter
FOY96_RS18460	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOY96_RS18465	COG0560	Phosphoserine phosphatase
FOY96_RS18470	COG3726	membrane protein affecting hemolysin expression
FOY96_RS18480	COG0813	purine-nucleoside phosphorylase activity
FOY96_RS18490	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOY96_RS18500	COG1328	CTP reductase activity
FOY96_RS18505	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY96_RS18510	COG0084	hydrolase, TatD family'
FOY96_RS18515	COG4667	esterase of the alpha-beta hydrolase superfamily
FOY96_RS18520	COG5487	UPF0391 membrane protein
FOY96_RS18525	COG2823	Periplasmic or secreted lipoprotein
FOY96_RS18530	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOY96_RS18535	COG1011	Hydrolase
FOY96_RS18540	COG0456	acetyltransferase
FOY96_RS18545	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FOY96_RS18550	COG2813	Specifically methylates the guanine in position
FOY96_RS18580	COG4114	ferric iron reductase
FOY96_RS18585	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY96_RS18590	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY96_RS18595	COG2197	response regulator
FOY96_RS18600	COG2197	response regulator
FOY96_RS18605	COG2966	Psort location CytoplasmicMembrane, score
FOY96_RS18610	COG3610	response to peptide
FOY96_RS18615	COG1309	transcriptional regulator
FOY96_RS18620	COG1846	Transcriptional regulator
FOY96_RS18625	COG1764	response to oxidative stress
FOY96_RS18635	COG1484	DNA-dependent DNA replication
FOY96_RS18655	COG0840	transmembrane signaling receptor activity
FOY96_RS18660	COG1846	Transcriptional regulator
FOY96_RS18665	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY96_RS18670	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS18675	COG3384	dioxygenase
FOY96_RS18685	COG3971	2-oxopent-4-enoate hydratase activity
FOY96_RS18705	COG2368	4-hydroxyphenylacetate
FOY96_RS18710	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY96_RS18720	COG1966	Carbon starvation protein
FOY96_RS18725	COG2879	small protein
FOY96_RS18730	COG0523	cobalamin synthesis protein
FOY96_RS18750	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS18775	COG2733	membrane
FOY96_RS18805	COG1012	belongs to the aldehyde dehydrogenase family
FOY96_RS18810	COG0583	DNA-binding transcription factor activity
FOY96_RS18815	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY96_RS18825	COG5457	Domain of unknown function (DUF1127)
FOY96_RS18830	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY96_RS18835	COG2850	peptidyl-arginine hydroxylation
FOY96_RS18870	COG1136	(ABC) transporter
FOY96_RS18880	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOY96_RS18915	COG0740	serine-type endopeptidase activity
FOY96_RS18920	COG0346	lactoylglutathione lyase activity
FOY96_RS18930	COG4191	Histidine kinase
FOY96_RS19020	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FOY96_RS19075	COG2003	Belongs to the UPF0758 family
FOY96_RS19135	COG1278	Cold shock
FOY96_RS19145	COG3459	Glycosyltransferase 36 associated
FOY96_RS19165	COG1560	Kdo2-lipid A biosynthetic process
FOY96_RS19220	COG2135	peptidase activity
FOY96_RS19250	COG0758	DNA mediated transformation
FOY96_RS19265	COG0582	viral genome integration into host DNA
FOY96_RS19290	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOY96_RS19295	COG2731	YhcH YjgK YiaL family protein
FOY96_RS19300	COG2235	arginine
FOY96_RS19315	COG1288	antiporter activity
FOY96_RS19320	COG1438	arginine binding
FOY96_RS19335	COG0540	Belongs to the ATCase OTCase family
FOY96_RS19345	COG0251	oxidation-reduction process
FOY96_RS19350	COG3525	Glycosyl hydrolase, family 20, catalytic domain
FOY96_RS19365	COG1263	PTS System
FOY96_RS19365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY96_RS19370	COG0366	Alpha amylase catalytic
FOY96_RS19380	COG0602	queuosine metabolic process
FOY96_RS19385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY96_RS19385	COG3711	transcriptional antiterminator
FOY96_RS19405	COG3964	amidohydrolase
FOY96_RS19440	COG0312	modulator of DNA gyrase
FOY96_RS19445	COG3028	Belongs to the UPF0307 family
FOY96_RS19450	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOY96_RS19460	COG0583	DNA-binding transcription factor activity
FOY96_RS19470	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS19475	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS19480	COG1129	ABC transporter
FOY96_RS19485	COG1879	ABC-type sugar transport system periplasmic component
FOY96_RS19510	COG2105	PFAM AIG2 family protein
FOY96_RS19515	COG2911	Protein conserved in bacteria
FOY96_RS19520	COG0729	surface antigen
FOY96_RS19525	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOY96_RS19530	COG1253	flavin adenine dinucleotide binding
FOY96_RS19540	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FOY96_RS19545	COG1218	3'(2'),5'-bisphosphate nucleotidase
FOY96_RS19555	COG1733	regulation of RNA biosynthetic process
FOY96_RS19560	COG0702	epimerase
FOY96_RS19570	COG2207	Transcriptional regulator
FOY96_RS19580	COG0697	spore germination
FOY96_RS19585	COG0840	transmembrane signaling receptor activity
FOY96_RS19595	COG1113	amino acid transport
FOY96_RS19600	COG0545	Peptidyl-prolyl cis-trans isomerase
FOY96_RS19605	COG3061	Opacity-associated protein A
FOY96_RS19610	COG0359	binds to the 23S rRNA
FOY96_RS19615	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOY96_RS19620	COG2965	DNA replication, synthesis of RNA primer
FOY96_RS19635	COG1073	alpha beta
FOY96_RS19640	COG3650	response to hydrogen peroxide
FOY96_RS19655	COG1960	acyl-CoA dehydrogenase activity
FOY96_RS19660	COG0477	Major facilitator Superfamily
FOY96_RS19665	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY96_RS19670	COG0557	exoribonuclease II activity
FOY96_RS19675	COG1959	2 iron, 2 sulfur cluster binding
FOY96_RS19680	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FOY96_RS19685	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FOY96_RS19690	COG0330	HflC and HflK could
FOY96_RS19695	COG0330	HflC and HflK could
FOY96_RS19700	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOY96_RS19705	COG1923	regulation of RNA biosynthetic process
FOY96_RS19710	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOY96_RS19715	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOY96_RS19725	COG0802	atpase or kinase
FOY96_RS19730	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOY96_RS19730	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOY96_RS19735	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOY96_RS19745	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOY96_RS19760	COG3264	Mechanosensitive ion channel
FOY96_RS19760	COG1511	domain protein
FOY96_RS19765	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FOY96_RS19770	COG1053	succinate dehydrogenase
FOY96_RS19775	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOY96_RS19780	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FOY96_RS19790	COG0583	DNA-binding transcription factor activity
FOY96_RS19820	COG5510	response to toxic substance
FOY96_RS19825	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOY96_RS19840	COG0459	protein refolding
FOY96_RS19850	COG0531	amino acid
FOY96_RS19855	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOY96_RS19860	COG1027	Aspartate ammonia-lyase
FOY96_RS19865	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOY96_RS19880	COG1309	transcriptional regulator
FOY96_RS19920	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY96_RS19930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOY96_RS19935	COG0009	L-threonylcarbamoyladenylate synthase
FOY96_RS19940	COG0551	DNA topoisomerase type I activity
FOY96_RS19945	COG2922	Belongs to the Smg family
FOY96_RS19950	COG0758	DNA mediated transformation
FOY96_RS19955	COG0242	peptide deformylase activity
FOY96_RS19960	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOY96_RS19980	COG3036	rescue of stalled ribosome
FOY96_RS19985	COG0789	Transcriptional regulator
FOY96_RS20000	COG0202	RNA polymerase activity
FOY96_RS20010	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOY96_RS20025	COG0201	protein transport
FOY96_RS20035	COG1841	ribosomal large subunit assembly
FOY96_RS20050	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOY96_RS20055	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOY96_RS20085	COG0255	Belongs to the universal ribosomal protein uL29 family
FOY96_RS20090	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOY96_RS20130	COG0051	transcription antitermination factor activity, RNA binding
FOY96_RS20170	COG2168	tRNA wobble position uridine thiolation
FOY96_RS20175	COG2923	Belongs to the DsrF TusC family
FOY96_RS20180	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOY96_RS20185	COG2964	Protein conserved in bacteria
FOY96_RS20190	COG0545	Peptidyl-prolyl cis-trans isomerase
FOY96_RS20200	COG1047	Peptidyl-prolyl cis-trans
FOY96_RS20205	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FOY96_RS20210	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY96_RS20210	COG0475	glutathione-regulated potassium exporter activity
FOY96_RS20215	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY96_RS20220	COG0488	(ABC) transporter
FOY96_RS20225	COG0429	hydrolase of the alpha beta-hydrolase fold
FOY96_RS20230	COG3089	Belongs to the UPF0270 family
FOY96_RS20235	COG3954	Phosphoribulokinase
FOY96_RS20240	COG1765	OsmC-like protein
FOY96_RS20250	COG1289	transmembrane transporter activity
FOY96_RS20255	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOY96_RS20265	COG2184	nucleotidyltransferase activity
FOY96_RS20275	COG0738	Major facilitator superfamily
FOY96_RS20280	COG0402	S-adenosylhomocysteine deaminase activity
FOY96_RS20285	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY96_RS20295	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOY96_RS20295	COG1648	precorrin-2 dehydrogenase activity
FOY96_RS20305	COG0180	Tryptophanyl-tRNA synthetase
FOY96_RS20315	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOY96_RS20320	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FOY96_RS20325	COG3266	domain, Protein
FOY96_RS20330	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOY96_RS20335	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOY96_RS20340	COG4796	Type ii and iii secretion system protein
FOY96_RS20360	COG4972	Pilus assembly protein
FOY96_RS20365	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOY96_RS20370	COG0494	nUDIX hydrolase
FOY96_RS20380	COG1011	Hydrolase
FOY96_RS20385	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOY96_RS20390	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOY96_RS20395	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FOY96_RS20410	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOY96_RS20415	COG2183	response to ionizing radiation
FOY96_RS20420	COG1918	ferrous iron import across plasma membrane
FOY96_RS20445	COG1040	competence protein
FOY96_RS20455	COG2610	gluconate transmembrane transporter activity
FOY96_RS20460	COG1640	4-alpha-glucanotransferase
FOY96_RS20465	COG0058	SHG alpha-glucan phosphorylase activity
FOY96_RS20470	COG2909	trisaccharide binding
FOY96_RS20475	COG1349	DNA-binding transcription factor activity
FOY96_RS20480	COG0705	Rhomboid family
FOY96_RS20485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY96_RS20490	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOY96_RS20495	COG0058	SHG alpha-glucan phosphorylase activity
FOY96_RS20500	COG0297	glycogen (starch) synthase activity
FOY96_RS20505	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOY96_RS20510	COG1523	belongs to the glycosyl hydrolase 13 family
FOY96_RS20515	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOY96_RS20520	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOY96_RS20525	COG2095	MarC family integral membrane protein
FOY96_RS20530	COG0425	Belongs to the sulfur carrier protein TusA family
FOY96_RS20535	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOY96_RS20545	COG0477	Major facilitator Superfamily
FOY96_RS20550	COG0628	permease
FOY96_RS20560	COG2226	methyltransferase
FOY96_RS20580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOY96_RS20590	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY96_RS20590	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FOY96_RS20600	COG1216	Glycosyl transferase, family 2
FOY96_RS20625	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY96_RS20635	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS20640	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY96_RS20685	COG3479	Phenolic acid decarboxylase
FOY96_RS20695	COG1028	Short-chain dehydrogenase reductase Sdr
FOY96_RS20700	COG0791	NLP P60 protein
FOY96_RS20725	COG1414	Transcriptional regulator
FOY96_RS20730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOY96_RS20735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY96_RS20755	COG2205	protein histidine kinase activity
FOY96_RS20760	COG0745	RESPONSE REGULATOR receiver
FOY96_RS20765	COG1276	copper resistance
FOY96_RS20770	COG2372	response to copper ion
FOY96_RS20775	COG3667	copper resistance
FOY96_RS20780	COG2132	Multicopper oxidase
FOY96_RS20790	COG0739	heme binding
FOY96_RS20820	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY96_RS20885	COG2081	HI0933 family
FOY96_RS20890	COG0306	phosphate transporter
FOY96_RS20910	COG0589	response to stress
FOY96_RS20915	COG0742	ribosomal rna small subunit methyltransferase
FOY96_RS20920	COG0339	signal peptide processing
FOY96_RS20925	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOY96_RS20930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOY96_RS20945	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY96_RS20960	COG0583	DNA-binding transcription factor activity
FOY96_RS20965	COG1295	ribonuclease BN
FOY96_RS20970	COG0477	Major facilitator Superfamily
FOY96_RS20975	COG2982	Protein involved in outer membrane biogenesis
FOY96_RS20980	COG2200	EAL domain
FOY96_RS20990	COG0612	Peptidase, M16
FOY96_RS20995	COG1301	dicarboxylic acid transport
FOY96_RS21000	COG2199	diguanylate cyclase activity
FOY96_RS21000	COG2200	EAL domain
FOY96_RS21005	COG0457	Tetratricopeptide repeat
FOY96_RS21005	COG3118	belongs to the thioredoxin family
FOY96_RS21010	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOY96_RS21015	COG1215	transferase activity, transferring glycosyl groups
FOY96_RS21020	COG1215	transferase activity, transferring glycosyl groups
FOY96_RS21045	COG2194	sulfuric ester hydrolase activity
FOY96_RS21060	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOY96_RS21100	COG1739	Uncharacterized protein family UPF0029
FOY96_RS21105	COG0006	proline dipeptidase activity
FOY96_RS21110	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY96_RS21110	COG1024	Enoyl-CoA hydratase
FOY96_RS21115	COG0183	Belongs to the thiolase family
FOY96_RS21125	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY96_RS21135	COG0084	hydrolase, TatD family'
FOY96_RS21140	COG0805	protein transport
FOY96_RS21145	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOY96_RS21150	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOY96_RS21155	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOY96_RS21165	COG2226	methyltransferase
FOY96_RS21170	COG1322	Protein conserved in bacteria
FOY96_RS21180	COG0412	Dienelactone hydrolase
FOY96_RS21185	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOY96_RS21190	COG0583	DNA-binding transcription factor activity
FOY96_RS21195	COG0697	spore germination
FOY96_RS21200	COG0561	phosphatase activity
FOY96_RS21205	COG2267	carboxylic ester hydrolase activity
FOY96_RS21210	COG1280	lysine exporter protein (LysE YggA)
FOY96_RS21215	COG1280	lysine exporter protein (LysE YggA)
FOY96_RS21250	COG1011	Hydrolase
FOY96_RS21285	COG0181	hydroxymethylbilane synthase activity
FOY96_RS21295	COG2959	enzyme of heme biosynthesis
FOY96_RS21300	COG3071	HemY protein
FOY96_RS21335	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FOY96_RS21350	COG2244	polysaccharide biosynthetic process
FOY96_RS21355	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOY96_RS21360	COG0456	acetyltransferase
FOY96_RS21365	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOY96_RS21370	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOY96_RS21380	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOY96_RS21385	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOY96_RS21390	COG3118	belongs to the thioredoxin family
FOY96_RS21400	COG0248	Ppx GppA phosphatase
FOY96_RS21410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY96_RS21415	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY96_RS21425	COG0583	DNA-binding transcription factor activity
FOY96_RS21430	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOY96_RS21440	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOY96_RS21445	COG3978	acetolactate synthase activity
FOY96_RS21460	COG0606	chelatase, subunit chli
FOY96_RS21465	COG3085	chromosome segregation
FOY96_RS21515	COG4206	TonB-dependent receptor
FOY96_RS21520	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY96_RS21540	COG0583	DNA-binding transcription factor activity
FOY96_RS21545	COG0165	Argininosuccinate lyase
FOY96_RS21555	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOY96_RS21560	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOY96_RS21565	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOY96_RS21570	COG2207	Transcriptional regulator
FOY96_RS21580	COG0371	Dehydrogenase
FOY96_RS21585	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FOY96_RS21595	COG0527	aspartate kinase activity
FOY96_RS21595	COG0460	homoserine dehydrogenase
FOY96_RS21600	COG0626	cystathionine gamma-synthase activity
FOY96_RS21615	COG0254	rRNA binding
FOY96_RS21620	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOY96_RS21625	COG1609	Transcriptional regulator
FOY96_RS21630	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOY96_RS21645	COG1575	Belongs to the MenA family. Type 1 subfamily
FOY96_RS21655	COG3074	FtsZ-dependent cytokinesis
FOY96_RS21665	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOY96_RS21670	COG1494	fructose-1,6-bisphosphatase
FOY96_RS21680	COG3152	Membrane
FOY96_RS21690	COG0149	triose-phosphate isomerase activity
FOY96_RS21700	COG2134	cdp-diacylglycerol pyrophosphatase
FOY96_RS21715	COG0205	6-phosphofructokinase activity
FOY96_RS21725	COG3678	ATP-independent chaperone mediated protein folding
FOY96_RS21730	COG0745	RESPONSE REGULATOR receiver
FOY96_RS21735	COG2205	protein histidine kinase activity
FOY96_RS21740	COG2258	MOSC domain
FOY96_RS21745	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOY96_RS21755	COG4977	sequence-specific DNA binding
FOY96_RS21755	COG1917	Cupin 2, conserved barrel domain protein
FOY96_RS21760	COG4977	sequence-specific DNA binding
FOY96_RS21765	COG1070	Carbohydrate kinase
FOY96_RS21770	COG4806	L-rhamnose isomerase
FOY96_RS21775	COG0235	Class ii aldolase
FOY96_RS21780	COG1454	alcohol dehydrogenase
FOY96_RS21785	COG3254	rhamnose metabolic process
FOY96_RS21790	COG2211	Major facilitator Superfamily
FOY96_RS21810	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FOY96_RS21835	COG0437	4 iron, 4 sulfur cluster binding
FOY96_RS21840	COG2864	formate dehydrogenase
FOY96_RS21845	COG3058	Necessary for formate dehydrogenase activity
FOY96_RS21855	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOY96_RS21860	COG0657	acetylesterase activity
FOY96_RS21865	COG0456	acetyltransferase
FOY96_RS21880	COG1011	Hydrolase
FOY96_RS21915	COG3852	Histidine kinase
FOY96_RS21930	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOY96_RS21940	COG3078	GTPase activator activity
FOY96_RS21955	COG0204	Acyl-transferase
FOY96_RS21965	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOY96_RS21970	COG3084	Protein conserved in bacteria
FOY96_RS21975	COG0746	molybdenum cofactor guanylyltransferase activity
FOY96_RS21980	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOY96_RS22005	COG2186	Transcriptional regulator
FOY96_RS22010	COG0477	Major facilitator Superfamily
FOY96_RS22015	COG1609	Transcriptional regulator
FOY96_RS22020	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY96_RS22025	COG1879	ABC-type sugar transport system periplasmic component
FOY96_RS22030	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY96_RS22035	COG1129	ABC transporter
FOY96_RS22040	COG1869	D-ribose catabolic process
FOY96_RS22045	COG3158	transport of potassium into the cell
FOY96_RS22055	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FOY96_RS22060	COG2502	aspartate--ammonia ligase
FOY96_RS22065	COG1522	sequence-specific DNA binding
FOY96_RS22070	COG0716	FMN binding
FOY96_RS22075	COG0445	tRNA wobble uridine modification
FOY96_RS22080	COG0357	Ribosomal RNA small subunit methyltransferase G
FOY96_RS22085	COG3312	ion transport
FOY96_RS22090	COG0356	it plays a direct role in the translocation of protons across the membrane
FOY96_RS22100	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FOY96_RS22105	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOY96_RS22110	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOY96_RS22120	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FOY96_RS22125	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOY96_RS22130	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOY96_RS22140	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOY96_RS22145	COG0573	inorganic phosphate transmembrane transporter activity
FOY96_RS22150	COG0581	inorganic phosphate transmembrane transporter activity
FOY96_RS22155	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOY96_RS22160	COG0704	Plays a role in the regulation of phosphate uptake
FOY96_RS22165	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY96_RS22170	COG2252	PERMEase
FOY96_RS22175	COG0431	NADPH-dependent FMN reductase
FOY96_RS22180	COG2091	lysine biosynthetic process via aminoadipic acid
FOY96_RS22195	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOY96_RS22200	COG0706	membrane insertase activity
FOY96_RS22415	COG1475	DNA binding
FOY96_RS22555	COG0330	HflC and HflK could
FOY96_RS22700	COG4974	Belongs to the 'phage' integrase family
FOY96_RS22715	COG2423	ornithine cyclodeaminase activity
FOY96_RS22745	COG1388	LysM domain
FOY96_RS22745	COG2373	Large extracellular alpha-helical protein
FOY96_RS22745	COG4932	domain protein
FOY96_RS22760	COG2200	EAL domain
FOY96_RS22760	COG2771	luxR family
FOY96_RS22875	COG3188	usher protein
FOY96_RS22895	COG1388	LysM domain
FOY96_RS22895	COG1470	cell adhesion involved in biofilm formation
FOY96_RS22915	COG3344	reverse transcriptase