locus-tag	class	description
JLD64_RS00010	COG0592	DNA-directed DNA polymerase activity
JLD64_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JLD64_RS00025	COG0583	DNA-binding transcription factor activity
JLD64_RS00035	COG0561	phosphatase activity
JLD64_RS00040	COG2186	Transcriptional regulator
JLD64_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
JLD64_RS00050	COG0800	Aldolase
JLD64_RS00055	COG4948	Mandelate Racemase Muconate Lactonizing
JLD64_RS00060	COG2271	Major facilitator Superfamily
JLD64_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
JLD64_RS00070	COG5645	(Lipo)protein
JLD64_RS00080	COG0071	Belongs to the small heat shock protein (HSP20) family
JLD64_RS00085	COG2985	domain, Protein
JLD64_RS00090	COG2188	Transcriptional regulator
JLD64_RS00105	COG2149	membrane
JLD64_RS00120	COG2610	gluconate transmembrane transporter activity
JLD64_RS00125	COG0583	DNA-binding transcription factor activity
JLD64_RS00135	COG2814	Major facilitator Superfamily
JLD64_RS00170	COG0028	Belongs to the TPP enzyme family
JLD64_RS00175	COG0440	acetolactate synthase activity
JLD64_RS00180	COG2197	response regulator
JLD64_RS00190	COG2271	Major facilitator Superfamily
JLD64_RS00200	COG0596	Alpha beta hydrolase
JLD64_RS00210	COG0583	DNA-binding transcription factor activity
JLD64_RS00240	COG2814	Major facilitator Superfamily
JLD64_RS00255	COG0667	Aldo Keto reductase
JLD64_RS00265	COG0697	spore germination
JLD64_RS00270	COG4580	involved in the transport of maltose and maltodextrins
JLD64_RS00275	COG1447	Phosphotransferase system cellobiose-specific component IIA
JLD64_RS00280	COG2723	6-phospho-beta-galactosidase activity
JLD64_RS00285	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS00285	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS00295	COG1609	Transcriptional regulator
JLD64_RS00305	COG0454	-acetyltransferase
JLD64_RS00310	COG1464	Belongs to the NlpA lipoprotein family
JLD64_RS00315	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JLD64_RS00340	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JLD64_RS00345	COG0583	DNA-binding transcription factor activity
JLD64_RS00355	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS00365	COG3272	Protein of unknown function (DUF1722)
JLD64_RS00375	COG0789	Transcriptional regulator
JLD64_RS00390	COG0519	Catalyzes the synthesis of GMP from XMP
JLD64_RS00425	COG2211	Major facilitator Superfamily
JLD64_RS00430	COG1501	Belongs to the glycosyl hydrolase 31 family
JLD64_RS00435	COG2982	Protein involved in outer membrane biogenesis
JLD64_RS00440	COG2233	PERMEase
JLD64_RS00445	COG0786	glutamate:sodium symporter activity
JLD64_RS00450	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JLD64_RS00455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLD64_RS00460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JLD64_RS00475	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JLD64_RS00480	COG2860	membrane
JLD64_RS00485	COG1561	YicC-like family, N-terminal region
JLD64_RS00495	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JLD64_RS00505	COG0756	dUTP diphosphatase activity
JLD64_RS00510	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JLD64_RS00515	COG2003	Belongs to the UPF0758 family
JLD64_RS00520	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JLD64_RS00525	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JLD64_RS00530	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JLD64_RS00535	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JLD64_RS00545	COG1519	Transferase
JLD64_RS00550	COG1216	Glycosyl transferase, family 2
JLD64_RS00555	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS00565	COG0859	PFAM glycosyl transferase family 9
JLD64_RS00590	COG0859	PFAM glycosyl transferase family 9
JLD64_RS00595	COG0859	PFAM glycosyl transferase family 9
JLD64_RS00610	COG1063	alcohol dehydrogenase
JLD64_RS00620	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS00625	COG0463	Glycosyl transferase, family 2
JLD64_RS00630	COG2861	carbohydrate metabolic process
JLD64_RS00635	COG4942	peptidase
JLD64_RS00640	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JLD64_RS00645	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLD64_RS00650	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JLD64_RS00655	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JLD64_RS00660	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JLD64_RS00670	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JLD64_RS00675	COG2271	Major facilitator Superfamily
JLD64_RS00685	COG2186	Transcriptional regulator
JLD64_RS00700	COG3722	fumarate hydratase activity
JLD64_RS00710	COG2213	PTS system mannitol-specific
JLD64_RS00710	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS00720	COG1566	PFAM secretion protein HlyD family protein
JLD64_RS00725	COG0625	glutathione transferase activity
JLD64_RS00735	COG3276	selenocysteine insertion sequence binding
JLD64_RS00740	COG1940	carbohydrate kinase activity
JLD64_RS00745	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS00750	COG0583	DNA-binding transcription factor activity
JLD64_RS00755	COG3713	MltA-interacting MipA family protein
JLD64_RS00795	COG3977	Valine--pyruvate aminotransferase
JLD64_RS00800	COG0366	Alpha amylase catalytic
JLD64_RS00805	COG2992	FlgJ-related protein
JLD64_RS00810	COG1609	Transcriptional regulator
JLD64_RS00810	COG2207	Transcriptional regulator
JLD64_RS00815	COG4214	carbohydrate transport
JLD64_RS00825	COG4213	ABC transporter substrate-binding protein
JLD64_RS00830	COG2115	Belongs to the xylose isomerase family
JLD64_RS00835	COG1070	Carbohydrate kinase
JLD64_RS00840	COG1335	isochorismatase
JLD64_RS00850	COG3274	enterobacterial common antigen metabolic process
JLD64_RS00860	COG0752	glycyl-tRNA synthetase alpha subunit
JLD64_RS00865	COG0751	glycine-tRNA ligase activity
JLD64_RS00880	COG0488	(ABC) transporter
JLD64_RS00885	COG2944	sequence-specific DNA binding
JLD64_RS00895	COG1278	Cold shock
JLD64_RS00900	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JLD64_RS00910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS00920	COG1609	Transcriptional regulator
JLD64_RS00925	COG2885	chlorophyll binding
JLD64_RS00930	COG0243	molybdopterin cofactor binding
JLD64_RS00935	COG0456	acetyltransferase
JLD64_RS00940	COG2818	Glycosylase
JLD64_RS00945	COG5571	outer membrane autotransporter
JLD64_RS00950	COG2223	nitrite transmembrane transporter activity
JLD64_RS00955	COG2194	sulfuric ester hydrolase activity
JLD64_RS00965	COG0747	negative chemotaxis
JLD64_RS00970	COG0601	transmembrane transport
JLD64_RS00975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS00980	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS00985	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS00990	COG1072	(Pantothenic acid kinase))
JLD64_RS01025	COG0250	Participates in transcription elongation, termination and antitermination
JLD64_RS01070	COG3706	GGDEF domain
JLD64_RS01080	COG2022	thiamine diphosphate biosynthetic process
JLD64_RS01085	COG2104	thiamine diphosphate biosynthetic process
JLD64_RS01090	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JLD64_RS01105	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JLD64_RS01115	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JLD64_RS01120	COG1515	deoxyribonuclease V activity
JLD64_RS01140	COG0151	Belongs to the GarS family
JLD64_RS01175	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JLD64_RS01185	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
JLD64_RS01215	COG1187	pseudouridine synthase activity
JLD64_RS01230	COG0527	aspartate kinase activity
JLD64_RS01255	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLD64_RS01260	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JLD64_RS01265	COG3223	Belongs to the PsiE family
JLD64_RS01300	COG3161	chorismate lyase activity
JLD64_RS01310	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JLD64_RS01325	COG2217	Heavy metal translocating P-type atpase
JLD64_RS01330	COG3714	YhhN family
JLD64_RS01340	COG3776	membrane
JLD64_RS01345	COG0742	ribosomal rna small subunit methyltransferase
JLD64_RS01350	COG0552	protein localization to endoplasmic reticulum
JLD64_RS01355	COG2884	Cell division ATP-binding protein ftsE
JLD64_RS01360	COG2177	Part of the ABC transporter FtsEX involved in
JLD64_RS01365	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JLD64_RS01370	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JLD64_RS01375	COG0683	leucine binding
JLD64_RS01380	COG0456	acetyltransferase
JLD64_RS01385	COG0683	leucine binding
JLD64_RS01395	COG4177	L-phenylalanine transmembrane transporter activity
JLD64_RS01400	COG0411	ABC transporter
JLD64_RS01430	COG0584	glycerophosphoryl diester phosphodiesterase
JLD64_RS01440	COG0405	Gamma-glutamyltransferase
JLD64_RS01445	COG1247	-acetyltransferase
JLD64_RS01450	COG0673	inositol 2-dehydrogenase activity
JLD64_RS01455	COG1741	Belongs to the pirin family
JLD64_RS01460	COG1609	Transcriptional regulator
JLD64_RS01465	COG3265	gluconokinase activity
JLD64_RS01470	COG2610	gluconate transmembrane transporter activity
JLD64_RS01475	COG2937	Belongs to the GPAT DAPAT family
JLD64_RS01480	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JLD64_RS01485	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JLD64_RS01490	COG0534	Mate efflux family protein
JLD64_RS01495	COG3237	CsbD-like
JLD64_RS01500	COG0735	belongs to the Fur family
JLD64_RS01515	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JLD64_RS01525	COG0604	alcohol dehydrogenase
JLD64_RS01530	COG0305	Participates in initiation and elongation during chromosome replication
JLD64_RS01540	COG1448	Aminotransferase
JLD64_RS01545	COG3700	Belongs to the class B bacterial acid phosphatase family
JLD64_RS01555	COG2315	Protein conserved in bacteria
JLD64_RS01565	COG0629	single-stranded DNA binding
JLD64_RS01575	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JLD64_RS01585	COG0789	Transcriptional regulator
JLD64_RS01590	COG0625	glutathione transferase activity
JLD64_RS01595	COG2252	PERMEase
JLD64_RS01600	COG0025	NhaP-type Na H and K H
JLD64_RS01605	COG0583	DNA-binding transcription factor activity
JLD64_RS01610	COG1380	Effector of murein hydrolase LrgA
JLD64_RS01615	COG1346	cytolysis
JLD64_RS01620	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JLD64_RS01625	COG3162	membrane
JLD64_RS01635	COG1301	dicarboxylic acid transport
JLD64_RS01640	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JLD64_RS01665	COG0191	fructose-bisphosphate aldolase activity
JLD64_RS01680	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS01685	COG1129	ABC transporter
JLD64_RS01690	COG4191	Histidine kinase
JLD64_RS01690	COG0784	Response regulator, receiver
JLD64_RS01700	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JLD64_RS01705	COG0456	acetyltransferase
JLD64_RS01710	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
JLD64_RS01715	COG3454	Phosphonate metabolism
JLD64_RS01720	COG4778	phosphonate C-P lyase system protein PhnL
JLD64_RS01725	COG4107	phosphonate C-P lyase system protein PhnK
JLD64_RS01730	COG3627	carbon phosphorus lyase activity
JLD64_RS01735	COG3626	phosphonate metabolism
JLD64_RS01740	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
JLD64_RS01745	COG3624	Phosphonate C-P lyase system protein PhnG
JLD64_RS01750	COG2188	Transcriptional regulator
JLD64_RS01755	COG3639	organic phosphonate transmembrane transporter activity
JLD64_RS01760	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JLD64_RS01770	COG2764	glyoxalase bleomycin resistance protein dioxygenase
JLD64_RS01775	COG2824	Alkylphosphonate utilization operon protein PhnA
JLD64_RS01780	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JLD64_RS01800	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JLD64_RS01845	COG1309	transcriptional regulator
JLD64_RS01860	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JLD64_RS01865	COG1027	Aspartate ammonia-lyase
JLD64_RS01870	COG3030	protein affecting phage T7 exclusion by the F plasmid
JLD64_RS01875	COG0531	amino acid
JLD64_RS01885	COG0459	protein refolding
JLD64_RS01890	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JLD64_RS01895	COG0700	Nucleoside recognition
JLD64_RS01900	COG3366	ferrous iron transmembrane transporter activity
JLD64_RS01910	COG1509	lysine 2,3-aminomutase activity
JLD64_RS01925	COG5510	response to toxic substance
JLD64_RS01950	COG0583	DNA-binding transcription factor activity
JLD64_RS01960	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
JLD64_RS01965	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JLD64_RS01970	COG1053	succinate dehydrogenase
JLD64_RS01975	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
JLD64_RS01985	COG1511	domain protein
JLD64_RS01985	COG3264	Mechanosensitive ion channel
JLD64_RS02000	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
JLD64_RS02020	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JLD64_RS02025	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JLD64_RS02025	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JLD64_RS02030	COG0802	atpase or kinase
JLD64_RS02040	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JLD64_RS02045	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JLD64_RS02050	COG1923	regulation of RNA biosynthetic process
JLD64_RS02055	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JLD64_RS02060	COG0330	HflC and HflK could
JLD64_RS02065	COG0330	HflC and HflK could
JLD64_RS02070	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JLD64_RS02080	COG1959	2 iron, 2 sulfur cluster binding
JLD64_RS02085	COG0557	exoribonuclease II activity
JLD64_RS02090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLD64_RS02095	COG0477	Major facilitator Superfamily
JLD64_RS02100	COG1960	acyl-CoA dehydrogenase activity
JLD64_RS02105	COG0840	transmembrane signaling receptor activity
JLD64_RS02115	COG3650	response to hydrogen peroxide
JLD64_RS02120	COG1073	alpha beta
JLD64_RS02135	COG3037	sugar-specific permease SgaT UlaA
JLD64_RS02175	COG2965	DNA replication, synthesis of RNA primer
JLD64_RS02180	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JLD64_RS02185	COG0359	binds to the 23S rRNA
JLD64_RS02190	COG0697	spore germination
JLD64_RS02195	COG3061	Opacity-associated protein A
JLD64_RS02200	COG0545	Peptidyl-prolyl cis-trans isomerase
JLD64_RS02205	COG1113	amino acid transport
JLD64_RS02215	COG0840	transmembrane signaling receptor activity
JLD64_RS02220	COG0697	spore germination
JLD64_RS02230	COG0702	epimerase
JLD64_RS02235	COG1733	regulation of RNA biosynthetic process
JLD64_RS02245	COG1218	3'(2'),5'-bisphosphate nucleotidase
JLD64_RS02250	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
JLD64_RS02260	COG1253	flavin adenine dinucleotide binding
JLD64_RS02265	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JLD64_RS02270	COG0729	surface antigen
JLD64_RS02275	COG2911	Protein conserved in bacteria
JLD64_RS02280	COG2105	PFAM AIG2 family protein
JLD64_RS02300	COG1879	ABC-type sugar transport system periplasmic component
JLD64_RS02305	COG1129	ABC transporter
JLD64_RS02310	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS02315	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS02320	COG0840	transmembrane signaling receptor activity
JLD64_RS02325	COG0583	DNA-binding transcription factor activity
JLD64_RS02335	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JLD64_RS02340	COG3028	Belongs to the UPF0307 family
JLD64_RS02345	COG0312	modulator of DNA gyrase
JLD64_RS02385	COG3964	amidohydrolase
JLD64_RS02405	COG3711	transcriptional antiterminator
JLD64_RS02405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS02410	COG3077	Addiction module antitoxin, RelB DinJ family
JLD64_RS02415	COG2026	Addiction module toxin, RelE StbE family
JLD64_RS02420	COG0602	queuosine metabolic process
JLD64_RS02430	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS02430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS02430	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS02435	COG0383	alpha-mannosidase activity
JLD64_RS02440	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS02455	COG0366	Alpha amylase catalytic
JLD64_RS02460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS02460	COG1263	PTS System
JLD64_RS02465	COG1609	Transcriptional regulator
JLD64_RS02475	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JLD64_RS02480	COG3397	chitin binding
JLD64_RS02485	COG0251	oxidation-reduction process
JLD64_RS02495	COG0540	Belongs to the ATCase OTCase family
JLD64_RS02510	COG1438	arginine binding
JLD64_RS02515	COG1288	antiporter activity
JLD64_RS02530	COG2235	arginine
JLD64_RS02535	COG2731	YhcH YjgK YiaL family protein
JLD64_RS02540	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JLD64_RS02545	COG0129	dihydroxy-acid dehydratase activity
JLD64_RS02550	COG2211	Major facilitator Superfamily
JLD64_RS02555	COG3507	Belongs to the glycosyl hydrolase 43 family
JLD64_RS02560	COG1414	Transcriptional regulator
JLD64_RS02565	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JLD64_RS02605	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JLD64_RS02610	COG0514	ATP-dependent DNA helicase (RecQ)
JLD64_RS02645	COG0720	synthase
JLD64_RS02690	COG1609	Transcriptional regulator
JLD64_RS02700	COG2211	Major facilitator Superfamily
JLD64_RS02710	COG1401	restriction endodeoxyribonuclease activity
JLD64_RS02735	COG1335	isochorismatase
JLD64_RS02750	COG4753	response regulator
JLD64_RS02750	COG2207	Transcriptional regulator
JLD64_RS02755	COG4191	Histidine kinase
JLD64_RS02760	COG4566	intracellular signal transduction
JLD64_RS02765	COG0346	lactoylglutathione lyase activity
JLD64_RS02770	COG0740	serine-type endopeptidase activity
JLD64_RS02775	COG2850	peptidyl-arginine hydroxylation
JLD64_RS02800	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLD64_RS02805	COG5457	Domain of unknown function (DUF1127)
JLD64_RS02815	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLD64_RS02820	COG0583	DNA-binding transcription factor activity
JLD64_RS02840	COG0640	Transcriptional regulator
JLD64_RS02870	COG0583	DNA-binding transcription factor activity
JLD64_RS02875	COG2733	membrane
JLD64_RS02895	COG3586	endonuclease activity
JLD64_RS02910	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
JLD64_RS02915	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS02935	COG0523	cobalamin synthesis protein
JLD64_RS02940	COG2879	small protein
JLD64_RS02945	COG1966	Carbon starvation protein
JLD64_RS02955	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLD64_RS02960	COG2368	4-hydroxyphenylacetate
JLD64_RS02980	COG3971	2-oxopent-4-enoate hydratase activity
JLD64_RS02990	COG3384	dioxygenase
JLD64_RS02995	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS03000	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLD64_RS03005	COG1846	Transcriptional regulator
JLD64_RS03010	COG0583	DNA-binding transcription factor activity
JLD64_RS03020	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JLD64_RS03025	COG0840	transmembrane signaling receptor activity
JLD64_RS03045	COG1484	DNA-dependent DNA replication
JLD64_RS03055	COG1764	response to oxidative stress
JLD64_RS03060	COG1846	Transcriptional regulator
JLD64_RS03065	COG1309	transcriptional regulator
JLD64_RS03070	COG3610	response to peptide
JLD64_RS03075	COG2966	Psort location CytoplasmicMembrane, score
JLD64_RS03080	COG2197	response regulator
JLD64_RS03085	COG2197	response regulator
JLD64_RS03090	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLD64_RS03095	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS03100	COG4114	ferric iron reductase
JLD64_RS03130	COG2813	Specifically methylates the guanine in position
JLD64_RS03135	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
JLD64_RS03140	COG0456	acetyltransferase
JLD64_RS03145	COG1011	Hydrolase
JLD64_RS03150	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JLD64_RS03155	COG2823	Periplasmic or secreted lipoprotein
JLD64_RS03160	COG5487	UPF0391 membrane protein
JLD64_RS03165	COG4667	esterase of the alpha-beta hydrolase superfamily
JLD64_RS03170	COG0084	hydrolase, TatD family'
JLD64_RS03175	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLD64_RS03180	COG1328	CTP reductase activity
JLD64_RS03190	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JLD64_RS03210	COG3726	membrane protein affecting hemolysin expression
JLD64_RS03215	COG0560	Phosphoserine phosphatase
JLD64_RS03240	COG0488	(ABC) transporter
JLD64_RS03245	COG0741	lytic transglycosylase activity
JLD64_RS03250	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
JLD64_RS03255	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JLD64_RS03260	COG0406	alpha-ribazole phosphatase activity
JLD64_RS03265	COG2207	Transcriptional regulator
JLD64_RS03265	COG3708	Transcriptional regulator
JLD64_RS03270	COG3045	CreA protein
JLD64_RS03275	COG0745	RESPONSE REGULATOR receiver
JLD64_RS03280	COG2205	protein histidine kinase activity
JLD64_RS03285	COG4452	Inner membrane protein CreD
JLD64_RS03290	COG0745	RESPONSE REGULATOR receiver
JLD64_RS03300	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JLD64_RS03310	COG0527	aspartate kinase activity
JLD64_RS03310	COG0460	homoserine dehydrogenase
JLD64_RS03320	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JLD64_RS03330	COG3022	response to hydroperoxide
JLD64_RS03335	COG1115	amino acid carrier protein
JLD64_RS03345	COG0521	Mo-molybdopterin cofactor biosynthetic process
JLD64_RS03350	COG0477	Major facilitator Superfamily
JLD64_RS03355	COG1584	GPR1 FUN34 yaaH family protein
JLD64_RS03370	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLD64_RS03375	COG0583	DNA-binding transcription factor activity
JLD64_RS03380	COG0268	Binds directly to 16S ribosomal RNA
JLD64_RS03385	COG0196	riboflavin kinase activity
JLD64_RS03400	COG1047	Peptidyl-prolyl cis-trans
JLD64_RS03405	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JLD64_RS03415	COG0505	Belongs to the CarA family
JLD64_RS03430	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLD64_RS03435	COG0475	glutathione-regulated potassium exporter activity
JLD64_RS03435	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLD64_RS03445	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JLD64_RS03450	COG2967	ApaG domain
JLD64_RS03460	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JLD64_RS03465	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JLD64_RS03470	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JLD64_RS03475	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JLD64_RS03480	COG0564	pseudouridine synthase activity
JLD64_RS03485	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JLD64_RS03490	COG0417	DNA replication proofreading
JLD64_RS03495	COG0235	Class ii aldolase
JLD64_RS03500	COG2160	L-arabinose isomerase activity
JLD64_RS03505	COG1069	ribulokinase activity
JLD64_RS03515	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS03525	COG1178	ABC-type Fe3 transport system permease component
JLD64_RS03545	COG2814	Major facilitator Superfamily
JLD64_RS03570	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JLD64_RS03585	COG0028	Belongs to the TPP enzyme family
JLD64_RS03595	COG1609	Transcriptional regulator
JLD64_RS03600	COG2001	Belongs to the MraZ family
JLD64_RS03615	COG0768	penicillin binding
JLD64_RS03620	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JLD64_RS03625	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JLD64_RS03630	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JLD64_RS03640	COG0772	Belongs to the SEDS family
JLD64_RS03655	COG1181	Belongs to the D-alanine--D-alanine ligase family
JLD64_RS03665	COG0849	cell division
JLD64_RS03670	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JLD64_RS03675	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
JLD64_RS03685	COG0653	protein targeting
JLD64_RS03690	COG0494	nUDIX hydrolase
JLD64_RS03695	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
JLD64_RS03700	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
JLD64_RS03710	COG0516	GMP reductase activity
JLD64_RS03715	COG1459	type II secretion system
JLD64_RS03725	COG3725	Membrane protein required for beta-lactamase induction
JLD64_RS03730	COG3940	Belongs to the glycosyl hydrolase 43 family
JLD64_RS03735	COG2211	Major facilitator Superfamily
JLD64_RS03740	COG1113	amino acid transport
JLD64_RS03750	COG2186	Transcriptional regulator
JLD64_RS03755	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JLD64_RS03760	COG0508	dehydrogenase complex catalyzes the overall conversion of
JLD64_RS03765	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JLD64_RS03780	COG3064	Membrane
JLD64_RS03790	COG3415	Transposase
JLD64_RS03790	COG2801	Transposase and inactivated derivatives
JLD64_RS03800	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JLD64_RS03805	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JLD64_RS03815	COG2132	Multicopper oxidase
JLD64_RS03820	COG4993	Dehydrogenase
JLD64_RS03830	COG0288	reversible hydration of carbon dioxide
JLD64_RS03835	COG1131	(ABC) transporter
JLD64_RS03840	COG0842	Transport permease protein
JLD64_RS03845	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS03850	COG0726	polysaccharide deacetylase
JLD64_RS03875	COG3188	usher protein
JLD64_RS03880	COG3121	Chaperone
JLD64_RS03890	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JLD64_RS03895	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JLD64_RS03900	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JLD64_RS03905	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JLD64_RS03910	COG0617	tRNA 3'-terminal CCA addition
JLD64_RS03915	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLD64_RS03925	COG1489	DNA binding
JLD64_RS03930	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JLD64_RS03935	COG1643	Atp-dependent helicase
JLD64_RS03940	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JLD64_RS03950	COG3121	Chaperone
JLD64_RS03955	COG3188	usher protein
JLD64_RS03965	COG4774	siderophore transport
JLD64_RS03970	COG1120	ATPase activity
JLD64_RS03975	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JLD64_RS03980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS03985	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JLD64_RS04000	COG2860	membrane
JLD64_RS04015	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JLD64_RS04025	COG3835	regulator
JLD64_RS04070	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JLD64_RS04085	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JLD64_RS04095	COG0575	Belongs to the CDS family
JLD64_RS04100	COG0750	zinc metalloprotease
JLD64_RS04105	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLD64_RS04110	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
JLD64_RS04115	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLD64_RS04120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JLD64_RS04125	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLD64_RS04130	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLD64_RS04135	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JLD64_RS04145	COG0825	malonyl-CoA metabolic process
JLD64_RS04150	COG1982	Orn Lys Arg decarboxylase major
JLD64_RS04155	COG0346	lactoylglutathione lyase activity
JLD64_RS04160	COG0037	tRNA processing
JLD64_RS04165	COG4568	rho-dependent transcription termination
JLD64_RS04180	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JLD64_RS04185	COG3015	lipoprotein NlpE involved in copper resistance
JLD64_RS04195	COG1720	tRNA m6t6A37 methyltransferase activity
JLD64_RS04205	COG1464	Belongs to the NlpA lipoprotein family
JLD64_RS04210	COG2011	ABC-type metal ion transport system permease component
JLD64_RS04220	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JLD64_RS04260	COG0583	DNA-binding transcription factor activity
JLD64_RS04265	COG2814	Major facilitator Superfamily
JLD64_RS04270	COG3021	interspecies interaction between organisms
JLD64_RS04275	COG2226	methyltransferase
JLD64_RS04280	COG0741	lytic transglycosylase activity
JLD64_RS04280	COG1388	LysM domain
JLD64_RS04285	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLD64_RS04290	COG2226	methyltransferase
JLD64_RS04300	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JLD64_RS04315	COG0583	DNA-binding transcription factor activity
JLD64_RS04325	COG2197	response regulator
JLD64_RS04330	COG2205	protein histidine kinase activity
JLD64_RS04330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS04335	COG2197	response regulator
JLD64_RS04350	COG3469	chitinase activity
JLD64_RS04420	COG2165	general secretion pathway protein
JLD64_RS04430	COG1450	Type ii and iii secretion system protein
JLD64_RS04455	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JLD64_RS04460	COG1459	type II secretion system
JLD64_RS04485	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS04490	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS04495	COG0747	negative chemotaxis
JLD64_RS04505	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS04515	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLD64_RS04520	COG1960	acyl-CoA dehydrogenase activity
JLD64_RS04530	COG0121	glutamine amidotransferase
JLD64_RS04535	COG3034	peptidoglycan biosynthetic process
JLD64_RS04550	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JLD64_RS04555	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JLD64_RS04570	COG2991	Protein conserved in bacteria
JLD64_RS04580	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JLD64_RS04585	COG2195	Cleaves the N-terminal amino acid of tripeptides
JLD64_RS04595	COG1073	alpha beta
JLD64_RS04605	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JLD64_RS04610	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JLD64_RS04615	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JLD64_RS04640	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JLD64_RS04650	COG5001	Diguanylate cyclase
JLD64_RS04650	COG3300	MHYT domain
JLD64_RS04670	COG0628	permease
JLD64_RS04675	COG0833	amino acid
JLD64_RS04680	COG2040	homocysteine
JLD64_RS04685	COG4521	taurine ABC transporter
JLD64_RS04690	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JLD64_RS04695	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JLD64_RS04700	COG2175	clavaminate synthase activity
JLD64_RS04710	COG0113	porphobilinogen synthase activity
JLD64_RS04725	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JLD64_RS04735	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JLD64_RS04755	COG1181	Belongs to the D-alanine--D-alanine ligase family
JLD64_RS04780	COG3706	GGDEF domain
JLD64_RS04785	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JLD64_RS04790	COG1671	Belongs to the UPF0178 family
JLD64_RS04795	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JLD64_RS04805	COG4126	flavin adenine dinucleotide binding
JLD64_RS04810	COG3123	guanosine phosphorylase activity
JLD64_RS04820	COG1940	carbohydrate kinase activity
JLD64_RS04825	COG0419	ATPase involved in DNA repair
JLD64_RS04830	COG0420	3'-5' exonuclease activity
JLD64_RS04840	COG5002	protein histidine kinase activity
JLD64_RS04855	COG0366	Alpha amylase catalytic
JLD64_RS04870	COG0450	alkyl hydroperoxide reductase
JLD64_RS04875	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
JLD64_RS04890	COG1862	Preprotein translocase
JLD64_RS04895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JLD64_RS04900	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JLD64_RS04915	COG3248	Nucleoside-binding outer membrane protein
JLD64_RS04920	COG4238	major outer membrane lipoprotein
JLD64_RS04925	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JLD64_RS04930	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JLD64_RS04930	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JLD64_RS04935	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JLD64_RS04940	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JLD64_RS04945	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JLD64_RS04950	COG0667	Aldo Keto reductase
JLD64_RS04955	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JLD64_RS04960	COG0142	geranyltranstransferase activity
JLD64_RS04975	COG0693	protein deglycase activity
JLD64_RS04980	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JLD64_RS04990	COG2814	Major facilitator Superfamily
JLD64_RS04995	COG0109	protoheme IX farnesyltransferase activity
JLD64_RS05000	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JLD64_RS05005	COG1845	cytochrome c oxidase, subunit III
JLD64_RS05010	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JLD64_RS05015	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JLD64_RS05020	COG2223	nitrite transmembrane transporter activity
JLD64_RS05025	COG3056	Lipoprotein
JLD64_RS05030	COG0271	Belongs to the BolA IbaG family
JLD64_RS05035	COG0544	peptidyl-prolyl cis-trans isomerase activity
JLD64_RS05050	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JLD64_RS05055	COG0776	regulation of translation
JLD64_RS05060	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JLD64_RS05065	COG1555	photosystem II stabilization
JLD64_RS05070	COG0824	Thioesterase
JLD64_RS05075	COG3657	addiction module killer protein
JLD64_RS05090	COG4533	DNA binding
JLD64_RS05095	COG0561	phosphatase activity
JLD64_RS05105	COG1522	sequence-specific DNA binding
JLD64_RS05110	COG1132	(ABC) transporter
JLD64_RS05115	COG1132	(ABC) transporter
JLD64_RS05120	COG0347	Belongs to the P(II) protein family
JLD64_RS05125	COG0004	ammonium transporteR
JLD64_RS05130	COG1946	Acyl-CoA thioesterase
JLD64_RS05135	COG3126	Type III secretion system lipoprotein chaperone (YscW)
JLD64_RS05140	COG3695	enzyme binding
JLD64_RS05160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLD64_RS05165	COG2364	Membrane
JLD64_RS05170	COG1609	Transcriptional regulator
JLD64_RS05190	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JLD64_RS05200	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JLD64_RS05220	COG0110	maltose O-acetyltransferase activity
JLD64_RS05235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS05240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS05245	COG1309	transcriptional regulator
JLD64_RS05250	COG3264	Mechanosensitive ion channel
JLD64_RS05250	COG1196	nuclear chromosome segregation
JLD64_RS05260	COG3923	Primosomal replication protein n
JLD64_RS05265	COG2832	Protein of unknown function (DUF454)
JLD64_RS05270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JLD64_RS05280	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JLD64_RS05285	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JLD64_RS05290	COG0326	Molecular chaperone. Has ATPase activity
JLD64_RS05300	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JLD64_RS05305	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS05310	COG2801	Transposase and inactivated derivatives
JLD64_RS05310	COG3415	Transposase
JLD64_RS05315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLD64_RS05315	COG4651	solute:proton antiporter activity
JLD64_RS05320	COG2223	nitrite transmembrane transporter activity
JLD64_RS05325	COG0737	Belongs to the 5'-nucleotidase family
JLD64_RS05330	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLD64_RS05335	COG3735	TraB family
JLD64_RS05340	COG2217	Heavy metal translocating P-type atpase
JLD64_RS05350	COG1585	Membrane protein implicated in regulation of membrane protease activity
JLD64_RS05355	COG0330	HflC and HflK could
JLD64_RS05365	COG4619	ABC transporter
JLD64_RS05370	COG0390	transport system, permease component
JLD64_RS05375	COG3118	belongs to the thioredoxin family
JLD64_RS05380	COG0300	oxidoreductase activity
JLD64_RS05385	COG2755	lipolytic protein G-D-S-L family
JLD64_RS05390	COG4181	ATPase activity
JLD64_RS05395	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JLD64_RS05410	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JLD64_RS05415	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JLD64_RS05420	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLD64_RS05425	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JLD64_RS05435	COG1988	membrane-bound metal-dependent
JLD64_RS05440	COG1609	Transcriptional regulator
JLD64_RS05445	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS05445	COG1263	PTS System
JLD64_RS05445	COG2190	(PTS) system
JLD64_RS05450	COG2801	Transposase and inactivated derivatives
JLD64_RS05450	COG3415	Transposase
JLD64_RS05455	COG2501	S4 domain
JLD64_RS05530	COG1113	amino acid transport
JLD64_RS05535	COG2211	Major facilitator Superfamily
JLD64_RS05550	COG1609	Transcriptional regulator
JLD64_RS05555	COG0668	transmembrane transport
JLD64_RS05560	COG0477	Major facilitator Superfamily
JLD64_RS05585	COG0778	Nitroreductase
JLD64_RS05590	COG2315	Protein conserved in bacteria
JLD64_RS05605	COG2207	Transcriptional regulator
JLD64_RS05630	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
JLD64_RS05715	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS05720	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS05725	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS05730	COG0601	transmembrane transport
JLD64_RS05750	COG4221	oxidoreductase activity
JLD64_RS05765	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
JLD64_RS05785	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JLD64_RS05790	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
JLD64_RS05805	COG1121	(ABC) transporter
JLD64_RS05810	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLD64_RS05815	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLD64_RS05820	COG2977	Belongs to the P-Pant transferase superfamily
JLD64_RS05825	COG3415	Transposase
JLD64_RS05825	COG2801	Transposase and inactivated derivatives
JLD64_RS05830	COG4771	TonB-dependent receptor
JLD64_RS05835	COG2382	esterase
JLD64_RS05840	COG3251	PFAM MbtH domain protein
JLD64_RS05845	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JLD64_RS05845	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLD64_RS05850	COG1120	ATPase activity
JLD64_RS05855	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS05860	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS05870	COG4592	Periplasmic binding protein
JLD64_RS05875	COG1169	isochorismate synthase
JLD64_RS05880	COG1021	2,3-dihydroxybenzoate-AMP ligase
JLD64_RS05885	COG3433	isochorismatase activity
JLD64_RS05885	COG1535	isochorismatase
JLD64_RS05890	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS05895	COG2050	protein possibly involved in aromatic compounds catabolism
JLD64_RS05900	COG1966	Carbon starvation protein
JLD64_RS05905	COG2879	small protein
JLD64_RS05925	COG0371	Dehydrogenase
JLD64_RS05930	COG1129	ABC transporter
JLD64_RS05935	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS05950	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JLD64_RS05970	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
JLD64_RS05975	COG0235	Class ii aldolase
JLD64_RS05980	COG0436	Aminotransferase
JLD64_RS05985	COG1475	DNA binding
JLD64_RS05990	COG3969	phosphoadenosine phosphosulfate
JLD64_RS05995	COG0583	DNA-binding transcription factor activity
JLD64_RS06005	COG3634	alkyl hydroperoxide reductase activity
JLD64_RS06035	COG1063	alcohol dehydrogenase
JLD64_RS06040	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JLD64_RS06045	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLD64_RS06050	COG3719	Belongs to the RNase T2 family
JLD64_RS06055	COG3069	C4-dicarboxylate transmembrane transporter activity
JLD64_RS06070	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JLD64_RS06075	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLD64_RS06080	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLD64_RS06085	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JLD64_RS06090	COG0583	DNA-binding transcription factor activity
JLD64_RS06095	COG0321	lipoyl(octanoyl) transferase activity
JLD64_RS06105	COG1686	Belongs to the peptidase S11 family
JLD64_RS06110	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JLD64_RS06115	COG0772	Belongs to the SEDS family
JLD64_RS06120	COG0768	penicillin binding
JLD64_RS06130	COG0799	negative regulation of ribosome biogenesis
JLD64_RS06140	COG1466	dna polymerase III delta subunit
JLD64_RS06155	COG2888	peptidyl-tyrosine sulfation
JLD64_RS06160	COG1957	nucleoside hydrolase
JLD64_RS06165	COG1126	abc transporter atp-binding protein
JLD64_RS06170	COG0765	amino acid transport
JLD64_RS06175	COG0765	amino acid transport
JLD64_RS06190	COG4535	Mg2 and Co2 transporter CorC
JLD64_RS06195	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JLD64_RS06200	COG1702	phosphate starvation-inducible protein PhoH
JLD64_RS06205	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JLD64_RS06210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLD64_RS06250	COG0367	asparagine synthase
JLD64_RS06255	COG0647	UMP catabolic process
JLD64_RS06260	COG1940	carbohydrate kinase activity
JLD64_RS06260	COG1846	Transcriptional regulator
JLD64_RS06265	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JLD64_RS06275	COG2190	(PTS) system
JLD64_RS06275	COG1263	PTS System
JLD64_RS06275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS06280	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLD64_RS06295	COG0735	belongs to the Fur family
JLD64_RS06310	COG0596	Alpha beta hydrolase
JLD64_RS06315	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
JLD64_RS06320	COG0033	Phosphoglucomutase
JLD64_RS06325	COG0531	amino acid
JLD64_RS06330	COG1982	Orn Lys Arg decarboxylase major
JLD64_RS06340	COG0745	RESPONSE REGULATOR receiver
JLD64_RS06345	COG2205	protein histidine kinase activity
JLD64_RS06350	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JLD64_RS06355	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JLD64_RS06360	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
JLD64_RS06380	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JLD64_RS06385	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JLD64_RS06390	COG1984	allophanate hydrolase subunit 2
JLD64_RS06400	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JLD64_RS06405	COG0372	Belongs to the citrate synthase family
JLD64_RS06410	COG2009	succinate dehydrogenase
JLD64_RS06415	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JLD64_RS06420	COG1053	succinate dehydrogenase
JLD64_RS06425	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JLD64_RS06430	COG0567	Dehydrogenase, E1 component
JLD64_RS06435	COG0508	dehydrogenase complex catalyzes the overall conversion of
JLD64_RS06440	COG0045	succinate-CoA ligase (ADP-forming) activity
JLD64_RS06445	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JLD64_RS06450	COG2188	Transcriptional regulator
JLD64_RS06455	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS06455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS06455	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS06460	COG0383	alpha-mannosidase activity
JLD64_RS06465	COG1271	oxidase subunit
JLD64_RS06470	COG1294	oxidase, subunit
JLD64_RS06475	COG4890	Cyd operon protein YbgT
JLD64_RS06480	COG3790	cyd operon protein YbgE
JLD64_RS06485	COG0824	Thioesterase
JLD64_RS06490	COG0811	peptide transport
JLD64_RS06495	COG0848	biopolymer transport protein
JLD64_RS06500	COG3064	Membrane
JLD64_RS06510	COG2885	chlorophyll binding
JLD64_RS06515	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JLD64_RS06555	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JLD64_RS06560	COG3201	nicotinamide mononucleotide transporter
JLD64_RS06565	COG1230	cation diffusion facilitator family transporter
JLD64_RS06575	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JLD64_RS06585	COG2017	converts alpha-aldose to the beta-anomer
JLD64_RS06590	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JLD64_RS06595	COG1085	galactose-1-phosphate uridylyltransferase
JLD64_RS06600	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JLD64_RS06605	COG1119	ATPase activity
JLD64_RS06610	COG2005	Transcriptional regulator
JLD64_RS06610	COG3585	molybdate ion transport
JLD64_RS06620	COG0725	ABC transporter, periplasmic molybdate-binding protein
JLD64_RS06625	COG4149	molybdate abc transporter
JLD64_RS06635	COG0561	phosphatase activity
JLD64_RS06640	COG2706	6-phosphogluconolactonase activity
JLD64_RS06650	COG4677	pectinesterase activity
JLD64_RS06660	COG0010	Belongs to the arginase family
JLD64_RS06670	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JLD64_RS06675	COG2986	histidine ammonia-lyase
JLD64_RS06680	COG1881	PFAM PEBP family protein
JLD64_RS06690	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JLD64_RS06695	COG0156	8-amino-7-oxononanoate synthase activity
JLD64_RS06730	COG0521	Mo-molybdopterin cofactor biosynthetic process
JLD64_RS06735	COG0315	cyclic pyranopterin monophosphate synthase activity
JLD64_RS06740	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JLD64_RS06745	COG0314	molybdopterin synthase activity
JLD64_RS06750	COG0670	Belongs to the BI1 family
JLD64_RS06755	COG0392	lysyltransferase activity
JLD64_RS06760	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JLD64_RS06765	COG3568	Endonuclease Exonuclease Phosphatase
JLD64_RS06775	COG0842	Transport permease protein
JLD64_RS06780	COG0842	Transport permease protein
JLD64_RS06785	COG1131	(ABC) transporter
JLD64_RS06790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS06795	COG1309	transcriptional regulator
JLD64_RS06800	COG0513	Belongs to the DEAD box helicase family
JLD64_RS06825	COG3121	Chaperone
JLD64_RS06830	COG3539	Fimbrial protein
JLD64_RS06835	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JLD64_RS06845	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JLD64_RS06855	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
JLD64_RS06860	COG0668	transmembrane transport
JLD64_RS06865	COG1126	abc transporter atp-binding protein
JLD64_RS06870	COG0765	amino acid transport
JLD64_RS06875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS06880	COG0783	Belongs to the Dps family
JLD64_RS06890	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JLD64_RS06895	COG2194	sulfuric ester hydrolase activity
JLD64_RS06905	COG1321	iron dependent repressor
JLD64_RS06910	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JLD64_RS06915	COG1566	PFAM secretion protein HlyD family protein
JLD64_RS06920	COG2814	Major facilitator Superfamily
JLD64_RS06930	COG0667	Aldo Keto reductase
JLD64_RS06940	COG2723	6-phospho-beta-galactosidase activity
JLD64_RS06945	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS06950	COG2188	Transcriptional regulator
JLD64_RS06955	COG1376	ErfK ybiS ycfS ynhG family protein
JLD64_RS06960	COG0488	(ABC) transporter
JLD64_RS06970	COG2271	Major facilitator Superfamily
JLD64_RS06975	COG1609	Transcriptional regulator
JLD64_RS06985	COG0561	phosphatase activity
JLD64_RS06990	COG1882	Formate acetyltransferase
JLD64_RS06995	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLD64_RS07000	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JLD64_RS07005	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JLD64_RS07015	COG1446	asparaginase
JLD64_RS07025	COG0747	negative chemotaxis
JLD64_RS07050	COG2133	pyrroloquinoline quinone binding
JLD64_RS07055	COG0625	glutathione transferase activity
JLD64_RS07060	COG1686	Belongs to the peptidase S11 family
JLD64_RS07065	COG1349	DNA-binding transcription factor activity
JLD64_RS07070	COG0671	phosphoesterase, PA-phosphatase related
JLD64_RS07080	COG2814	Major facilitator Superfamily
JLD64_RS07085	COG0561	phosphatase activity
JLD64_RS07090	COG0738	Major facilitator superfamily
JLD64_RS07095	COG3226	Transcriptional regulator
JLD64_RS07100	COG1393	Belongs to the ArsC family
JLD64_RS07110	COG0640	Transcriptional regulator
JLD64_RS07150	COG0569	domain protein
JLD64_RS07150	COG2985	domain, Protein
JLD64_RS07165	COG0778	Nitroreductase
JLD64_RS07170	COG0189	ligase activity
JLD64_RS07180	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JLD64_RS07185	COG3842	ATPase activity
JLD64_RS07190	COG1176	ABC-type spermidine putrescine transport system, permease component I
JLD64_RS07195	COG1177	transmembrane transport
JLD64_RS07205	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLD64_RS07210	COG0745	RESPONSE REGULATOR receiver
JLD64_RS07215	COG5002	protein histidine kinase activity
JLD64_RS07220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS07225	COG4160	amino acid transport
JLD64_RS07230	COG4215	(ABC) transporter
JLD64_RS07235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS07240	COG1126	abc transporter atp-binding protein
JLD64_RS07250	COG0393	Putative heavy-metal-binding
JLD64_RS07255	COG3023	N-Acetylmuramoyl-L-alanine amidase
JLD64_RS07275	COG3031	protein transport across the cell outer membrane
JLD64_RS07280	COG1450	Type ii and iii secretion system protein
JLD64_RS07285	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JLD64_RS07290	COG1459	type II secretion system
JLD64_RS07295	COG2165	general secretion pathway protein
JLD64_RS07305	COG2165	general secretion pathway protein
JLD64_RS07315	COG3156	type II secretion system protein K
JLD64_RS07330	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JLD64_RS07345	COG3397	chitin binding
JLD64_RS07350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLD64_RS07355	COG0702	epimerase
JLD64_RS07360	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JLD64_RS07365	COG0028	Belongs to the TPP enzyme family
JLD64_RS07375	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLD64_RS07380	COG1151	hydroxylamine reductase activity
JLD64_RS07385	COG2431	L-lysine efflux transmembrane transporter activity
JLD64_RS07390	COG2801	Transposase and inactivated derivatives
JLD64_RS07390	COG3415	Transposase
JLD64_RS07400	COG3593	DNA synthesis involved in DNA repair
JLD64_RS07405	COG2990	Protein conserved in bacteria
JLD64_RS07410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS07420	COG1278	Cold shock
JLD64_RS07425	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JLD64_RS07430	COG0542	response to heat
JLD64_RS07440	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JLD64_RS07445	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JLD64_RS07450	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JLD64_RS07455	COG4988	ABC transporter
JLD64_RS07460	COG0492	ferredoxin-NADP+ reductase activity
JLD64_RS07470	COG1674	ftsk spoiiie
JLD64_RS07470	COG1178	ABC-type Fe3 transport system permease component
JLD64_RS07475	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JLD64_RS07480	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JLD64_RS07485	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JLD64_RS07490	COG0243	molybdopterin cofactor binding
JLD64_RS07495	COG0437	4 iron, 4 sulfur cluster binding
JLD64_RS07500	COG3302	dmso reductase anchor subunit
JLD64_RS07505	COG0477	Major facilitator Superfamily
JLD64_RS07515	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLD64_RS07520	COG1882	Formate acetyltransferase
JLD64_RS07525	COG2116	formate transmembrane transporter activity
JLD64_RS07530	COG1944	ATP diphosphatase activity
JLD64_RS07535	COG2323	membrane
JLD64_RS07540	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JLD64_RS07545	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JLD64_RS07550	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JLD64_RS07555	COG0539	negative regulation of cytoplasmic translation
JLD64_RS07560	COG0776	regulation of translation
JLD64_RS07565	COG2333	competence protein COMEC
JLD64_RS07565	COG0658	competence protein
JLD64_RS07575	COG1663	tetraacyldisaccharide 4'-kinase activity
JLD64_RS07580	COG3214	Protein conserved in bacteria
JLD64_RS07585	COG2835	tetraacyldisaccharide 4'-kinase activity
JLD64_RS07590	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JLD64_RS07595	COG3173	Aminoglycoside phosphotransferase
JLD64_RS07600	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JLD64_RS07605	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JLD64_RS07615	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JLD64_RS07620	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JLD64_RS07625	COG2989	Protein conserved in bacteria
JLD64_RS07630	COG3108	Peptidase M15
JLD64_RS07635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLD64_RS07640	COG1448	Aminotransferase
JLD64_RS07650	COG0017	Asparaginyl-tRNA synthetase
JLD64_RS07655	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JLD64_RS07660	COG0308	aminopeptidase N
JLD64_RS07670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JLD64_RS07675	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS07680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JLD64_RS07685	COG0431	NADPH-dependent FMN reductase
JLD64_RS07690	COG0167	dihydroorotate dehydrogenase activity
JLD64_RS07700	COG0633	Ferredoxin
JLD64_RS07700	COG3217	Mosc domain protein beta barrel domain protein
JLD64_RS07705	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JLD64_RS07705	COG0116	Belongs to the methyltransferase superfamily
JLD64_RS07710	COG0488	(ABC) transporter
JLD64_RS07715	COG2995	paraquat-inducible protein a
JLD64_RS07720	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JLD64_RS07720	COG3008	intermembrane lipid transfer
JLD64_RS07725	COG3009	Protein conserved in bacteria
JLD64_RS07730	COG3130	regulation of translation
JLD64_RS07740	COG1067	ATP-dependent peptidase activity
JLD64_RS07745	COG3120	sequence-specific DNA binding
JLD64_RS07755	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
JLD64_RS07760	COG3070	regulator of competence-specific genes
JLD64_RS07765	COG1289	transmembrane transporter activity
JLD64_RS07770	COG3304	Inner membrane component domain
JLD64_RS07775	COG0210	DNA helicase
JLD64_RS07780	COG1803	Methylglyoxal synthase
JLD64_RS07785	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JLD64_RS07790	COG1832	CoA-binding protein
JLD64_RS07800	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JLD64_RS07810	COG1254	Belongs to the acylphosphatase family
JLD64_RS07815	COG2920	part of a sulfur-relay system
JLD64_RS07855	COG0670	Belongs to the BI1 family
JLD64_RS07880	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLD64_RS07885	COG1696	Membrane protein involved in D-alanine export
JLD64_RS07910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLD64_RS07915	COG3195	allantoin biosynthetic process
JLD64_RS07915	COG3648	Uricase
JLD64_RS07920	COG2351	hydroxyisourate hydrolase activity
JLD64_RS07925	COG0402	S-adenosylhomocysteine deaminase activity
JLD64_RS07930	COG1953	Uracil, thiamine, allantoin
JLD64_RS07985	COG0765	amino acid transport
JLD64_RS07990	COG1126	abc transporter atp-binding protein
JLD64_RS07995	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JLD64_RS08005	COG2239	Acts as a magnesium transporter
JLD64_RS08010	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS08015	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS08020	COG1733	regulation of RNA biosynthetic process
JLD64_RS08050	COG3729	General stress protein
JLD64_RS08070	COG2233	PERMEase
JLD64_RS08075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLD64_RS08080	COG0778	Nitroreductase
JLD64_RS08085	COG2267	carboxylic ester hydrolase activity
JLD64_RS08090	COG0251	oxidation-reduction process
JLD64_RS08095	COG1335	isochorismatase
JLD64_RS08100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS08105	COG1309	transcriptional regulator
JLD64_RS08115	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JLD64_RS08115	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JLD64_RS08115	COG0506	proline dehydrogenase activity
JLD64_RS08120	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JLD64_RS08130	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JLD64_RS08150	COG1702	phosphate starvation-inducible protein PhoH
JLD64_RS08160	COG1335	isochorismatase
JLD64_RS08170	COG0583	DNA-binding transcription factor activity
JLD64_RS08180	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JLD64_RS08185	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JLD64_RS08190	COG3381	protein complex oligomerization
JLD64_RS08240	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
JLD64_RS08255	COG2943	transferase activity, transferring hexosyl groups
JLD64_RS08260	COG5645	(Lipo)protein
JLD64_RS08275	COG1560	Kdo2-lipid A biosynthetic process
JLD64_RS08280	COG1054	Belongs to the UPF0176 family
JLD64_RS08285	COG2353	YceI-like domain
JLD64_RS08290	COG3038	cytochrome b561
JLD64_RS08315	COG0418	dihydroorotase activity
JLD64_RS08325	COG0477	Major facilitator Superfamily
JLD64_RS08330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLD64_RS08335	COG3132	Protein of unknown function, DUF480
JLD64_RS08345	COG0728	peptidoglycan biosynthetic process
JLD64_RS08370	COG1558	bacterial-type flagellum-dependent cell motility
JLD64_RS08375	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JLD64_RS08380	COG1749	Flagellar hook protein flgE
JLD64_RS08385	COG4787	bacterial-type flagellum-dependent cell motility
JLD64_RS08390	COG4786	Flagellar basal body rod
JLD64_RS08410	COG1256	bacterial-type flagellum assembly
JLD64_RS08415	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JLD64_RS08420	COG2814	Major facilitator Superfamily
JLD64_RS08425	COG0583	DNA-binding transcription factor activity
JLD64_RS08430	COG1530	ribonuclease E activity
JLD64_RS08435	COG0564	pseudouridine synthase activity
JLD64_RS08440	COG0424	maF-like protein
JLD64_RS08450	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JLD64_RS08455	COG0416	fatty acid biosynthetic process
JLD64_RS08460	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JLD64_RS08475	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JLD64_RS08480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLD64_RS08485	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JLD64_RS08490	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JLD64_RS08495	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JLD64_RS08500	COG0470	DNA polymerase III
JLD64_RS08505	COG0084	hydrolase, TatD family'
JLD64_RS08515	COG4773	Receptor
JLD64_RS08520	COG0537	adenosine 5'-monophosphoramidase activity
JLD64_RS08525	COG5633	Lipoprotein
JLD64_RS08530	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
JLD64_RS08545	COG3150	esterase
JLD64_RS08550	COG1252	NADH dehydrogenase
JLD64_RS08555	COG3134	Outer membrane lipoprotein
JLD64_RS08560	COG1309	transcriptional regulator
JLD64_RS08570	COG1376	ErfK ybiS ycfS ynhG family protein
JLD64_RS08570	COG1388	LysM domain
JLD64_RS08575	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JLD64_RS08580	COG4763	Acyl-transferase
JLD64_RS08585	COG4591	ABC-type transport system involved in lipoprotein release permease component
JLD64_RS08590	COG1136	(ABC) transporter
JLD64_RS08595	COG4591	ABC-type transport system involved in lipoprotein release permease component
JLD64_RS08605	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JLD64_RS08635	COG2850	peptidyl-arginine hydroxylation
JLD64_RS08650	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JLD64_RS08655	COG2915	High frequency lysogenization protein hflD homolog
JLD64_RS08670	COG1187	pseudouridine synthase activity
JLD64_RS08675	COG0538	isocitrate dehydrogenase activity
JLD64_RS08695	COG4251	negative regulation of phosphorylation
JLD64_RS08695	COG2203	Gaf domain
JLD64_RS08695	COG5001	Diguanylate cyclase
JLD64_RS08695	COG3706	GGDEF domain
JLD64_RS08700	COG2261	transglycosylase associated protein
JLD64_RS08710	COG2199	diguanylate cyclase activity
JLD64_RS08710	COG2203	Gaf domain
JLD64_RS08715	COG3042	response to heat
JLD64_RS08725	COG3189	MarR family transcriptional regulator
JLD64_RS08730	COG0504	CTP synthase activity
JLD64_RS08735	COG2807	transmembrane transport
JLD64_RS08740	COG2207	Transcriptional regulator
JLD64_RS08745	COG2707	UPF0756 membrane protein
JLD64_RS08755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLD64_RS08760	COG2718	Belongs to the UPF0229 family
JLD64_RS08765	COG2766	serine protein kinase
JLD64_RS08770	COG3713	MltA-interacting MipA family protein
JLD64_RS08790	COG3139	Protein of unknown function (DUF1315)
JLD64_RS08800	COG1335	isochorismatase
JLD64_RS08805	COG0252	asparaginase activity
JLD64_RS08810	COG0616	signal peptide processing
JLD64_RS08815	COG0778	Nitroreductase
JLD64_RS08820	COG0709	Synthesizes selenophosphate from selenide and ATP
JLD64_RS08825	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JLD64_RS08840	COG0494	nUDIX hydrolase
JLD64_RS08845	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLD64_RS08850	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JLD64_RS08855	COG2897	thiosulfate sulfurtransferase activity
JLD64_RS08860	COG4136	ATPase activity
JLD64_RS08865	COG4135	transport system, permease component
JLD64_RS08870	COG4134	Bacterial extracellular solute-binding protein
JLD64_RS08880	COG0708	Exodeoxyribonuclease III
JLD64_RS08890	COG3138	arginine N-succinyltransferase
JLD64_RS08895	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS08900	COG3724	N-succinylarginine dihydrolase activity
JLD64_RS08910	COG3678	ATP-independent chaperone mediated protein folding
JLD64_RS08920	COG0322	excinuclease ABC activity
JLD64_RS08925	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JLD64_RS08930	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLD64_RS08935	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS08940	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS08945	COG1447	Phosphotransferase system cellobiose-specific component IIA
JLD64_RS08950	COG1917	Cupin 2, conserved barrel domain protein
JLD64_RS08950	COG2169	Transcriptional regulator
JLD64_RS08955	COG1486	melibiose metabolic process
JLD64_RS08960	COG3394	polysaccharide catabolic process
JLD64_RS08965	COG0753	catalase activity
JLD64_RS08975	COG1823	symporter activity
JLD64_RS08980	COG1988	membrane-bound metal-dependent
JLD64_RS08985	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS08990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLD64_RS09000	COG3001	Fructosamine kinase
JLD64_RS09010	COG1105	Belongs to the carbohydrate kinase PfkB family
JLD64_RS09015	COG3137	Salt-induced outer membrane protein
JLD64_RS09040	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JLD64_RS09055	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JLD64_RS09060	COG0072	phenylalanine-tRNA ligase activity
JLD64_RS09060	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JLD64_RS09065	COG0776	regulation of translation
JLD64_RS09075	COG0386	Belongs to the glutathione peroxidase family
JLD64_RS09085	COG0791	NLP P60 protein
JLD64_RS09095	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JLD64_RS09100	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS09105	COG2610	gluconate transmembrane transporter activity
JLD64_RS09115	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JLD64_RS09120	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JLD64_RS09125	COG0583	DNA-binding transcription factor activity
JLD64_RS09135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS09140	COG4558	Periplasmic binding protein
JLD64_RS09145	COG3720	iron ion transport
JLD64_RS09155	COG4256	Hemin uptake protein
JLD64_RS09160	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JLD64_RS09165	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JLD64_RS09170	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JLD64_RS09170	COG0574	Belongs to the PEP-utilizing enzyme family
JLD64_RS09175	COG2211	Major facilitator Superfamily
JLD64_RS09180	COG1472	Belongs to the glycosyl hydrolase 3 family
JLD64_RS09190	COG0628	permease
JLD64_RS09195	COG0247	lactate metabolic process
JLD64_RS09195	COG0277	FAD linked oxidase domain protein
JLD64_RS09200	COG2050	protein possibly involved in aromatic compounds catabolism
JLD64_RS09210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JLD64_RS09225	COG3121	Chaperone
JLD64_RS09250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JLD64_RS09265	COG3121	Chaperone
JLD64_RS09280	COG3539	Fimbrial protein
JLD64_RS09295	COG2197	response regulator
JLD64_RS09300	COG3383	formate dehydrogenase (NAD+) activity
JLD64_RS09320	COG2200	EAL domain
JLD64_RS09325	COG0789	Transcriptional regulator
JLD64_RS09330	COG0316	Belongs to the HesB IscA family
JLD64_RS09335	COG0719	Fe-S assembly protein
JLD64_RS09340	COG0396	ATPase activity
JLD64_RS09345	COG0719	Fe-S assembly protein
JLD64_RS09350	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JLD64_RS09355	COG2166	iron-sulfur cluster assembly
JLD64_RS09360	COG1376	ErfK ybiS ycfS ynhG family protein
JLD64_RS09375	COG0626	cystathionine gamma-synthase activity
JLD64_RS09390	COG2011	ABC-type metal ion transport system permease component
JLD64_RS09395	COG1464	Belongs to the NlpA lipoprotein family
JLD64_RS09405	COG0765	amino acid transport
JLD64_RS09410	COG0765	amino acid transport
JLD64_RS09420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS09435	COG4191	Histidine kinase
JLD64_RS09455	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLD64_RS09465	COG4529	Protein conserved in bacteria
JLD64_RS09480	COG0534	Mate efflux family protein
JLD64_RS09485	COG0307	riboflavin synthase, alpha
JLD64_RS09490	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JLD64_RS09495	COG2814	Major facilitator Superfamily
JLD64_RS09500	COG0583	DNA-binding transcription factor activity
JLD64_RS09515	COG2814	Major facilitator Superfamily
JLD64_RS09525	COG0791	NLP P60 protein
JLD64_RS09530	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JLD64_RS09535	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JLD64_RS09540	COG0346	lactoylglutathione lyase activity
JLD64_RS09545	COG1902	pentaerythritol trinitrate reductase activity
JLD64_RS09550	COG1309	transcriptional regulator
JLD64_RS09555	COG2194	sulfuric ester hydrolase activity
JLD64_RS09560	COG3313	Fe-S protein
JLD64_RS09565	COG4989	oxidoreductase activity
JLD64_RS09570	COG2032	superoxide dismutase activity
JLD64_RS09580	COG1566	PFAM secretion protein HlyD family protein
JLD64_RS09595	COG3706	GGDEF domain
JLD64_RS09605	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JLD64_RS09610	COG3895	Periplasmic Protein
JLD64_RS09615	COG0259	pyridoxamine-phosphate oxidase activity
JLD64_RS09620	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JLD64_RS09625	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JLD64_RS09630	COG0625	glutathione transferase activity
JLD64_RS09635	COG3104	oligopeptide transport
JLD64_RS09640	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JLD64_RS09690	COG0673	inositol 2-dehydrogenase activity
JLD64_RS09695	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JLD64_RS09700	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JLD64_RS09705	COG1263	PTS System
JLD64_RS09705	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS09710	COG1609	Transcriptional regulator
JLD64_RS09715	COG0583	DNA-binding transcription factor activity
JLD64_RS09720	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JLD64_RS09730	COG5339	Protein conserved in bacteria
JLD64_RS09735	COG1482	cell wall glycoprotein biosynthetic process
JLD64_RS09740	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JLD64_RS09740	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JLD64_RS09745	COG0114	fumarate hydratase activity
JLD64_RS09755	COG2205	protein histidine kinase activity
JLD64_RS09760	COG0582	viral genome integration into host DNA
JLD64_RS09775	COG0745	RESPONSE REGULATOR receiver
JLD64_RS09780	COG3136	membrane protein required for alginate biosynthesis
JLD64_RS09785	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS09790	COG0531	amino acid
JLD64_RS09800	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JLD64_RS09805	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JLD64_RS09810	COG0668	transmembrane transport
JLD64_RS09815	COG0589	response to stress
JLD64_RS09830	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLD64_RS09835	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JLD64_RS09840	COG1473	amidohydrolase
JLD64_RS09850	COG0583	DNA-binding transcription factor activity
JLD64_RS09855	COG2840	Smr protein MutS2
JLD64_RS09865	COG0667	Aldo Keto reductase
JLD64_RS09875	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JLD64_RS09890	COG0583	DNA-binding transcription factor activity
JLD64_RS09905	COG5002	protein histidine kinase activity
JLD64_RS09905	COG3850	Histidine kinase
JLD64_RS09920	COG1403	HNH endonuclease
JLD64_RS09925	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS09935	COG0628	permease
JLD64_RS09940	COG2076	Multidrug Resistance protein
JLD64_RS09945	COG2076	Multidrug Resistance protein
JLD64_RS09950	COG3591	Belongs to the peptidase S1B family
JLD64_RS09960	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JLD64_RS09965	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JLD64_RS09970	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JLD64_RS09975	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS09980	COG1396	sequence-specific DNA binding
JLD64_RS09980	COG1917	Cupin 2, conserved barrel domain protein
JLD64_RS09985	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JLD64_RS09990	COG0174	glutamine synthetase
JLD64_RS09995	COG0531	amino acid
JLD64_RS10000	COG2814	Major facilitator Superfamily
JLD64_RS10005	COG0583	DNA-binding transcription factor activity
JLD64_RS10010	COG1940	carbohydrate kinase activity
JLD64_RS10015	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JLD64_RS10050	COG0625	glutathione transferase activity
JLD64_RS10060	COG3141	response to X-ray
JLD64_RS10065	COG2207	Transcriptional regulator
JLD64_RS10065	COG3708	Transcriptional regulator
JLD64_RS10070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS10090	COG0745	RESPONSE REGULATOR receiver
JLD64_RS10095	COG3713	MltA-interacting MipA family protein
JLD64_RS10105	COG3381	protein complex oligomerization
JLD64_RS10110	COG0243	molybdopterin cofactor binding
JLD64_RS10125	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLD64_RS10135	COG4948	Mandelate Racemase Muconate Lactonizing
JLD64_RS10140	COG1063	alcohol dehydrogenase
JLD64_RS10145	COG0477	Major facilitator Superfamily
JLD64_RS10150	COG0246	Mannitol dehydrogenase
JLD64_RS10165	COG1802	Transcriptional regulator
JLD64_RS10170	COG4221	oxidoreductase activity
JLD64_RS10190	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JLD64_RS10195	COG2911	Protein conserved in bacteria
JLD64_RS10205	COG3784	Protein of unknown function (DUF1318)
JLD64_RS10210	COG2207	Transcriptional regulator
JLD64_RS10215	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS10220	COG3706	GGDEF domain
JLD64_RS10230	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS10230	COG2030	dehydratase
JLD64_RS10235	COG3396	Phenylacetate-CoA oxygenase
JLD64_RS10240	COG3460	Phenylacetate-CoA oxygenase
JLD64_RS10245	COG3396	Phenylacetate-CoA oxygenase
JLD64_RS10250	COG2151	metal-sulfur cluster biosynthetic enzyme
JLD64_RS10255	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLD64_RS10260	COG1024	Enoyl-CoA hydratase
JLD64_RS10265	COG1024	Enoyl-CoA hydratase
JLD64_RS10270	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLD64_RS10275	COG2050	protein possibly involved in aromatic compounds catabolism
JLD64_RS10280	COG0183	Belongs to the thiolase family
JLD64_RS10285	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JLD64_RS10290	COG3327	negative regulation of DNA-templated transcription, initiation
JLD64_RS10295	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLD64_RS10300	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JLD64_RS10305	COG0386	Belongs to the glutathione peroxidase family
JLD64_RS10320	COG1280	lysine exporter protein (LysE YggA)
JLD64_RS10325	COG1396	sequence-specific DNA binding
JLD64_RS10335	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JLD64_RS10360	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLD64_RS10370	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS10400	COG0346	lactoylglutathione lyase activity
JLD64_RS10420	COG0300	oxidoreductase activity
JLD64_RS10435	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JLD64_RS10465	COG0583	DNA-binding transcription factor activity
JLD64_RS10480	COG3122	Protein conserved in bacteria
JLD64_RS10495	COG1643	Atp-dependent helicase
JLD64_RS10500	COG4122	O-methyltransferase activity
JLD64_RS10505	COG1538	Outer membrane efflux protein
JLD64_RS10520	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JLD64_RS10525	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JLD64_RS10530	COG3038	cytochrome b561
JLD64_RS10535	COG0673	inositol 2-dehydrogenase activity
JLD64_RS10540	COG1349	DNA-binding transcription factor activity
JLD64_RS10555	COG2274	protein secretion by the type I secretion system
JLD64_RS10580	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JLD64_RS10585	COG0456	acetyltransferase
JLD64_RS10605	COG0840	transmembrane signaling receptor activity
JLD64_RS10615	COG0583	DNA-binding transcription factor activity
JLD64_RS10620	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS10625	COG3111	PFAM Bacterial OB fold (BOF) protein
JLD64_RS10640	COG1546	Belongs to the CinA family
JLD64_RS10655	COG1294	oxidase, subunit
JLD64_RS10660	COG1271	oxidase subunit
JLD64_RS10665	COG3546	catalase activity
JLD64_RS10670	COG3685	Protein conserved in bacteria
JLD64_RS10680	COG3685	Protein conserved in bacteria
JLD64_RS10685	COG3729	General stress protein
JLD64_RS10690	COG5383	Protein conserved in bacteria
JLD64_RS10695	COG2272	Belongs to the type-B carboxylesterase lipase family
JLD64_RS10705	COG0436	Aminotransferase
JLD64_RS10715	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
JLD64_RS10720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLD64_RS10725	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLD64_RS10730	COG1275	C4-dicarboxylate transporter malic acid transport protein
JLD64_RS10735	COG0500	methyltransferase
JLD64_RS10740	COG2195	Cleaves the N-terminal amino acid of tripeptides
JLD64_RS10745	COG0747	negative chemotaxis
JLD64_RS10765	COG3135	benzoate transporter
JLD64_RS10770	COG1396	sequence-specific DNA binding
JLD64_RS10775	COG0826	peptidase U32
JLD64_RS10800	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JLD64_RS10830	COG3443	Belongs to the bacterial solute-binding protein 9 family
JLD64_RS10835	COG2814	Major facilitator Superfamily
JLD64_RS10840	COG0697	spore germination
JLD64_RS10855	COG1846	Transcriptional regulator
JLD64_RS10865	COG2814	Major facilitator Superfamily
JLD64_RS10885	COG0583	DNA-binding transcription factor activity
JLD64_RS10890	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS10900	COG2066	Belongs to the glutaminase family
JLD64_RS10910	COG3706	GGDEF domain
JLD64_RS10920	COG0246	Mannitol dehydrogenase
JLD64_RS10925	COG3781	membrane
JLD64_RS10940	COG0596	Alpha beta hydrolase
JLD64_RS10965	COG0494	nUDIX hydrolase
JLD64_RS10970	COG1349	DNA-binding transcription factor activity
JLD64_RS10985	COG0667	Aldo Keto reductase
JLD64_RS10990	COG0667	Aldo Keto reductase
JLD64_RS10995	COG0667	Aldo Keto reductase
JLD64_RS11020	COG0656	L-ascorbic acid biosynthetic process
JLD64_RS11030	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLD64_RS11035	COG0667	Aldo Keto reductase
JLD64_RS11055	COG2814	Major facilitator Superfamily
JLD64_RS11105	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JLD64_RS11115	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JLD64_RS11130	COG0583	DNA-binding transcription factor activity
JLD64_RS11135	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLD64_RS11145	COG1366	Belongs to the anti-sigma-factor antagonist family
JLD64_RS11195	COG3250	beta-galactosidase activity
JLD64_RS11200	COG4628	conserved protein (DUF2132)
JLD64_RS11205	COG1649	PFAM Uncharacterised BCR, COG1649
JLD64_RS11210	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JLD64_RS11245	COG0840	transmembrane signaling receptor activity
JLD64_RS11275	COG2200	EAL domain
JLD64_RS11290	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
JLD64_RS11295	COG0747	negative chemotaxis
JLD64_RS11300	COG0601	transmembrane transport
JLD64_RS11305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS11310	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS11315	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS11320	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS11330	COG1764	response to oxidative stress
JLD64_RS11360	COG0281	malic enzyme
JLD64_RS11365	COG0488	(ABC) transporter
JLD64_RS11370	COG1064	alcohol dehydrogenase
JLD64_RS11395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS11405	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS11415	COG2814	Major facilitator Superfamily
JLD64_RS11435	COG2864	formate dehydrogenase
JLD64_RS11440	COG0437	4 iron, 4 sulfur cluster binding
JLD64_RS11450	COG0697	spore germination
JLD64_RS11460	COG0583	DNA-binding transcription factor activity
JLD64_RS11510	COG2223	nitrite transmembrane transporter activity
JLD64_RS11515	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JLD64_RS11520	COG1140	nitrate reductase beta subunit
JLD64_RS11525	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JLD64_RS11530	COG2181	nitrate reductase activity
JLD64_RS11540	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JLD64_RS11545	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLD64_RS11560	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JLD64_RS11565	COG0640	Transcriptional regulator
JLD64_RS11570	COG1560	Kdo2-lipid A biosynthetic process
JLD64_RS11575	COG1942	4-Oxalocrotonate Tautomerase
JLD64_RS11580	COG0625	glutathione transferase activity
JLD64_RS11585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS11590	COG1126	abc transporter atp-binding protein
JLD64_RS11605	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JLD64_RS11610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS11615	COG1473	amidohydrolase
JLD64_RS11620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS11625	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JLD64_RS11625	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JLD64_RS11655	COG4772	TonB-dependent receptor
JLD64_RS11660	COG1802	Transcriptional regulator
JLD64_RS11665	COG2130	NADP-dependent
JLD64_RS11675	COG1247	-acetyltransferase
JLD64_RS11680	COG3238	Protein conserved in bacteria
JLD64_RS11690	COG0747	negative chemotaxis
JLD64_RS11720	COG3615	Tellurite resistance protein tehB
JLD64_RS11725	COG3615	Tellurite resistance protein tehB
JLD64_RS11735	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS11740	COG1177	transmembrane transport
JLD64_RS11745	COG1176	ABC-type spermidine putrescine transport system, permease component I
JLD64_RS11750	COG3842	ATPase activity
JLD64_RS11755	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JLD64_RS11760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLD64_RS11780	COG1271	oxidase subunit
JLD64_RS11785	COG1294	oxidase, subunit
JLD64_RS11795	COG3187	Heat shock protein
JLD64_RS11800	COG3042	response to heat
JLD64_RS11805	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JLD64_RS11805	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLD64_RS11805	COG1013	pyruvate-flavodoxin oxidoreductase activity
JLD64_RS11805	COG0674	pyruvate-flavodoxin oxidoreductase activity
JLD64_RS11810	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JLD64_RS11845	COG2135	peptidase activity
JLD64_RS11855	COG1278	Cold shock
JLD64_RS11970	COG0484	heat shock protein binding
JLD64_RS11975	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JLD64_RS12020	COG1846	Transcriptional regulator
JLD64_RS12045	COG0515	serine threonine protein kinase
JLD64_RS12045	COG2815	serine threonine protein kinase
JLD64_RS12080	COG0582	viral genome integration into host DNA
JLD64_RS12090	COG0513	Belongs to the DEAD box helicase family
JLD64_RS12110	COG3706	GGDEF domain
JLD64_RS12130	COG4166	transmembrane transport
JLD64_RS12135	COG2866	Carboxypeptidase
JLD64_RS12140	COG4948	Mandelate Racemase Muconate Lactonizing
JLD64_RS12145	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JLD64_RS12160	COG3768	UPF0283 membrane protein
JLD64_RS12165	COG3106	COG3106 Predicted ATPase
JLD64_RS12170	COG1609	Transcriptional regulator
JLD64_RS12180	COG3842	ATPase activity
JLD64_RS12185	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLD64_RS12190	COG1554	hydrolase, family 65, central catalytic
JLD64_RS12195	COG0673	inositol 2-dehydrogenase activity
JLD64_RS12200	COG1082	Xylose isomerase domain protein TIM barrel
JLD64_RS12205	COG1063	alcohol dehydrogenase
JLD64_RS12210	COG0395	ABC-type sugar transport system, permease component
JLD64_RS12215	COG1175	transmembrane transport
JLD64_RS12220	COG1653	transport
JLD64_RS12225	COG0366	Alpha amylase catalytic
JLD64_RS12235	COG1983	PspC domain protein
JLD64_RS12245	COG1842	Phage shock protein A
JLD64_RS12250	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JLD64_RS12265	COG4171	peptide transport system, permease
JLD64_RS12275	COG4172	Belongs to the ABC transporter superfamily
JLD64_RS12285	COG5002	protein histidine kinase activity
JLD64_RS12290	COG0745	RESPONSE REGULATOR receiver
JLD64_RS12300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS12305	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JLD64_RS12310	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLD64_RS12310	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLD64_RS12315	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
JLD64_RS12320	COG5001	Diguanylate cyclase
JLD64_RS12330	COG1349	DNA-binding transcription factor activity
JLD64_RS12340	COG0023	Translation Initiation Factor
JLD64_RS12345	COG0284	orotidine-5'-phosphate decarboxylase activity
JLD64_RS12350	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JLD64_RS12355	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JLD64_RS12360	COG0671	phosphoesterase, PA-phosphatase related
JLD64_RS12370	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JLD64_RS12400	COG0616	signal peptide processing
JLD64_RS12405	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS12410	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JLD64_RS12420	COG0009	L-threonylcarbamoyladenylate synthase
JLD64_RS12425	COG0613	PHP domain protein
JLD64_RS12440	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JLD64_RS12440	COG0512	Glutamine amidotransferase of anthranilate synthase
JLD64_RS12455	COG0159	tryptophan synthase activity
JLD64_RS12460	COG2391	methyltransferase activity
JLD64_RS12465	COG0425	Belongs to the sulfur carrier protein TusA family
JLD64_RS12475	COG3047	cAMP biosynthetic process
JLD64_RS12480	COG0727	PFAM Uncharacterised protein family (UPF0153)
JLD64_RS12505	COG2350	Protein conserved in bacteria
JLD64_RS12510	COG1280	lysine exporter protein (LysE YggA)
JLD64_RS12525	COG3099	Belongs to the UPF0263 family
JLD64_RS12530	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JLD64_RS12535	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS12540	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS12550	COG0601	transmembrane transport
JLD64_RS12560	COG2095	MarC family integral membrane protein
JLD64_RS12565	COG1454	alcohol dehydrogenase
JLD64_RS12565	COG1012	belongs to the aldehyde dehydrogenase family
JLD64_RS12570	COG1435	thymidine kinase activity
JLD64_RS12580	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JLD64_RS12585	COG0745	RESPONSE REGULATOR receiver
JLD64_RS12590	COG1752	Esterase of the alpha-beta hydrolase superfamily
JLD64_RS12595	COG3012	SEC-C Motif Domain Protein
JLD64_RS12600	COG0788	formyltetrahydrofolate deformylase activity
JLD64_RS12610	COG1522	sequence-specific DNA binding
JLD64_RS12615	COG0697	spore germination
JLD64_RS12620	COG2181	nitrate reductase activity
JLD64_RS12625	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JLD64_RS12630	COG1140	nitrate reductase beta subunit
JLD64_RS12635	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JLD64_RS12640	COG2223	nitrite transmembrane transporter activity
JLD64_RS12645	COG3850	Histidine kinase
JLD64_RS12650	COG2197	response regulator
JLD64_RS12655	COG4932	domain protein
JLD64_RS12660	COG0243	molybdopterin cofactor binding
JLD64_RS12665	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JLD64_RS12665	COG2146	nitrite reductase [NAD(P)H] activity
JLD64_RS12670	COG1116	anion transmembrane transporter activity
JLD64_RS12680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JLD64_RS12685	COG3707	response regulator
JLD64_RS12690	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JLD64_RS12695	COG0840	transmembrane signaling receptor activity
JLD64_RS12705	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JLD64_RS12710	COG4572	Cation transport regulator
JLD64_RS12715	COG0387	Pfam Sodium calcium exchanger
JLD64_RS12720	COG2877	3-deoxy-8-phosphooctulonate synthase activity
JLD64_RS12730	COG2890	protein-(glutamine-N5) methyltransferase activity
JLD64_RS12740	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JLD64_RS12745	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
JLD64_RS12750	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JLD64_RS12760	COG0659	secondary active sulfate transmembrane transporter activity
JLD64_RS12775	COG0193	aminoacyl-tRNA hydrolase activity
JLD64_RS12780	COG0012	GTP binding
JLD64_RS12795	COG3209	COG3209 Rhs family protein
JLD64_RS12825	COG1397	ADP-ribosylglycohydrolase
JLD64_RS12835	COG1397	ADP-ribosylglycohydrolase
JLD64_RS12870	COG0515	serine threonine protein kinase
JLD64_RS12975	COG0243	molybdopterin cofactor binding
JLD64_RS12980	COG0583	DNA-binding transcription factor activity
JLD64_RS12995	COG4977	sequence-specific DNA binding
JLD64_RS13005	COG2814	Major facilitator Superfamily
JLD64_RS13025	COG4774	siderophore transport
JLD64_RS13040	COG0741	lytic transglycosylase activity
JLD64_RS13045	COG1619	proteins homologs of microcin C7 resistance protein MccF
JLD64_RS13050	COG3263	regulation of cellular component size
JLD64_RS13055	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JLD64_RS13060	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JLD64_RS13065	COG2719	SpoVR family
JLD64_RS13075	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLD64_RS13090	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLD64_RS13095	COG3100	YcgL domain-containing protein
JLD64_RS13100	COG0850	regulation of cytokinetic process
JLD64_RS13105	COG2894	cell division
JLD64_RS13110	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JLD64_RS13115	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JLD64_RS13120	COG0318	PFAM AMP-dependent synthetase and ligase
JLD64_RS13125	COG3065	identical protein binding
JLD64_RS13130	COG1214	PFAM Peptidase M22, glycoprotease
JLD64_RS13135	COG1199	ATP-dependent helicase activity
JLD64_RS13140	COG0251	oxidation-reduction process
JLD64_RS13150	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JLD64_RS13160	COG1760	l-serine dehydratase
JLD64_RS13165	COG1253	flavin adenine dinucleotide binding
JLD64_RS13170	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS13170	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS13175	COG3715	PTS system
JLD64_RS13180	COG3716	PTS system mannose fructose sorbose family IID component
JLD64_RS13185	COG4811	Protein of unknown function (DUF986)
JLD64_RS13190	COG1971	Probably functions as a manganese efflux pump
JLD64_RS13195	COG2226	methyltransferase
JLD64_RS13200	COG0768	penicillin binding
JLD64_RS13235	COG1414	Transcriptional regulator
JLD64_RS13240	COG2814	Major facilitator Superfamily
JLD64_RS13245	COG0501	Belongs to the peptidase M48B family
JLD64_RS13260	COG1956	GAF domain-containing protein
JLD64_RS13265	COG2995	paraquat-inducible protein a
JLD64_RS13270	COG3008	intermembrane lipid transfer
JLD64_RS13275	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JLD64_RS13275	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
JLD64_RS13290	COG2990	Protein conserved in bacteria
JLD64_RS13305	COG1276	copper resistance
JLD64_RS13310	COG2372	response to copper ion
JLD64_RS13320	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLD64_RS13325	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JLD64_RS13330	COG1770	oligopeptidase
JLD64_RS13335	COG2979	Protein of unknown function (DUF533)
JLD64_RS13345	COG0800	Aldolase
JLD64_RS13350	COG0129	dihydroxy-acid dehydratase activity
JLD64_RS13355	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JLD64_RS13360	COG1737	Transcriptional regulator
JLD64_RS13370	COG1560	Kdo2-lipid A biosynthetic process
JLD64_RS13375	COG0739	heme binding
JLD64_RS13380	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JLD64_RS13390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLD64_RS13400	COG0632	four-way junction helicase activity
JLD64_RS13415	COG0494	nUDIX hydrolase
JLD64_RS13425	COG1335	isochorismatase
JLD64_RS13430	COG1801	Protein of unknown function DUF72
JLD64_RS13435	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JLD64_RS13440	COG2226	methyltransferase
JLD64_RS13445	COG0500	methyltransferase
JLD64_RS13450	COG3142	Participates in the control of copper homeostasis
JLD64_RS13455	COG3102	Protein conserved in bacteria
JLD64_RS13460	COG0018	arginyl-trna synthetase
JLD64_RS13465	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JLD64_RS13495	COG0745	RESPONSE REGULATOR receiver
JLD64_RS13510	COG0840	transmembrane signaling receptor activity
JLD64_RS13545	COG1301	dicarboxylic acid transport
JLD64_RS13585	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
JLD64_RS13595	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS13605	COG1879	ABC-type sugar transport system periplasmic component
JLD64_RS13610	COG1528	Iron-storage protein
JLD64_RS13615	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JLD64_RS13640	COG1528	Iron-storage protein
JLD64_RS13645	COG0814	amino acid
JLD64_RS13650	COG3012	SEC-C Motif Domain Protein
JLD64_RS13650	COG3318	Belongs to the UPF0149 family
JLD64_RS13715	COG2197	response regulator
JLD64_RS13725	COG2197	response regulator
JLD64_RS13730	COG1126	abc transporter atp-binding protein
JLD64_RS13735	COG0765	amino acid transport
JLD64_RS13745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS13765	COG1216	Glycosyl transferase, family 2
JLD64_RS13765	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS13775	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JLD64_RS13790	COG0366	Alpha amylase catalytic
JLD64_RS13795	COG2801	Transposase and inactivated derivatives
JLD64_RS13795	COG3415	Transposase
JLD64_RS13805	COG1677	Flagellar hook-basal body complex protein FliE
JLD64_RS13815	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JLD64_RS13825	COG1157	protein secretion by the type III secretion system
JLD64_RS13865	COG1987	bacterial-type flagellum assembly
JLD64_RS13875	COG2197	response regulator
JLD64_RS13900	COG5475	Uncharacterized small protein (DUF2158)
JLD64_RS13905	COG2354	Protein conserved in bacteria
JLD64_RS13910	COG0697	spore germination
JLD64_RS13915	COG3727	T/G mismatch-specific endonuclease activity
JLD64_RS13920	COG0270	DNA (cytosine-5-)-methyltransferase activity
JLD64_RS13925	COG1418	mRNA catabolic process
JLD64_RS13930	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JLD64_RS13940	COG3290	protein histidine kinase activity
JLD64_RS13945	COG4565	transcriptional regulatory protein
JLD64_RS13965	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JLD64_RS13965	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JLD64_RS13970	COG3121	Chaperone
JLD64_RS13985	COG3121	Chaperone
JLD64_RS13990	COG3539	Fimbrial protein
JLD64_RS14015	COG0583	DNA-binding transcription factor activity
JLD64_RS14020	COG3046	protein related to deoxyribodipyrimidine photolyase
JLD64_RS14070	COG0582	viral genome integration into host DNA
JLD64_RS14090	COG1475	DNA binding
JLD64_RS14205	COG0251	oxidation-reduction process
JLD64_RS14235	COG1376	ErfK ybiS ycfS ynhG family protein
JLD64_RS14240	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JLD64_RS14245	COG0589	response to stress
JLD64_RS14255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS14270	COG0477	Major facilitator Superfamily
JLD64_RS14275	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JLD64_RS14280	COG0006	proline dipeptidase activity
JLD64_RS14290	COG0534	Mate efflux family protein
JLD64_RS14305	COG1289	transmembrane transporter activity
JLD64_RS14310	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JLD64_RS14320	COG2925	Exonuclease
JLD64_RS14325	COG0531	amino acid
JLD64_RS14335	COG0583	DNA-binding transcription factor activity
JLD64_RS14340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLD64_RS14350	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JLD64_RS14360	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JLD64_RS14365	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JLD64_RS14365	COG0131	Imidazoleglycerol-phosphate dehydratase
JLD64_RS14375	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JLD64_RS14380	COG0107	imidazoleglycerol-phosphate synthase activity
JLD64_RS14410	COG0110	maltose O-acetyltransferase activity
JLD64_RS14420	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS14445	COG1091	dTDP-4-dehydrorhamnose reductase activity
JLD64_RS14465	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS14470	COG2327	Polysaccharide pyruvyl transferase
JLD64_RS14475	COG2244	polysaccharide biosynthetic process
JLD64_RS14480	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JLD64_RS14485	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JLD64_RS14495	COG0297	glycogen (starch) synthase activity
JLD64_RS14500	COG1051	belongs to the nudix hydrolase family
JLD64_RS14505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLD64_RS14510	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
JLD64_RS14515	COG0110	maltose O-acetyltransferase activity
JLD64_RS14520	COG1216	Glycosyl transferase, family 2
JLD64_RS14530	COG0438	transferase activity, transferring glycosyl groups
JLD64_RS14535	COG1045	serine acetyltransferase
JLD64_RS14540	COG0463	Glycosyl transferase, family 2
JLD64_RS14545	COG0489	protein tyrosine kinase activity
JLD64_RS14545	COG3206	protein involved in exopolysaccharide biosynthesis
JLD64_RS14560	COG1253	flavin adenine dinucleotide binding
JLD64_RS14565	COG2982	Protein involved in outer membrane biogenesis
JLD64_RS14570	COG0717	Belongs to the dCTP deaminase family
JLD64_RS14580	COG5001	Diguanylate cyclase
JLD64_RS14580	COG3447	MASE1 domain protein
JLD64_RS14580	COG5002	protein histidine kinase activity
JLD64_RS14585	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JLD64_RS14590	COG0443	Heat shock 70 kDa protein
JLD64_RS14595	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS14600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS14605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS14610	COG0477	Major facilitator Superfamily
JLD64_RS14615	COG2205	protein histidine kinase activity
JLD64_RS14620	COG0745	RESPONSE REGULATOR receiver
JLD64_RS14625	COG0826	peptidase U32
JLD64_RS14630	COG1597	lipid kinase activity
JLD64_RS14635	COG1830	Aldolase
JLD64_RS14640	COG2211	Major facilitator Superfamily
JLD64_RS14645	COG1397	ADP-ribosylglycohydrolase
JLD64_RS14650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS14655	COG2188	Transcriptional regulator
JLD64_RS14660	COG0351	phosphomethylpyrimidine kinase
JLD64_RS14665	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JLD64_RS14670	COG3157	Type VI secretion system effector, Hcp
JLD64_RS14705	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JLD64_RS14710	COG0076	glutamate decarboxylase activity
JLD64_RS14715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JLD64_RS14720	COG3206	protein involved in exopolysaccharide biosynthesis
JLD64_RS14720	COG0489	protein tyrosine kinase activity
JLD64_RS14725	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JLD64_RS14730	COG1596	polysaccharide export
JLD64_RS14735	COG5455	response to cobalt ion
JLD64_RS14745	COG0489	protein tyrosine kinase activity
JLD64_RS14750	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JLD64_RS14750	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JLD64_RS14755	COG4807	Protein conserved in bacteria
JLD64_RS14765	COG3275	phosphorelay sensor kinase activity
JLD64_RS14770	COG0789	Transcriptional regulator
JLD64_RS14780	COG1174	glycine betaine transport
JLD64_RS14785	COG1125	glycine betaine transport
JLD64_RS14790	COG1174	glycine betaine transport
JLD64_RS14795	COG1732	Glycine betaine
JLD64_RS14800	COG1472	Belongs to the glycosyl hydrolase 3 family
JLD64_RS14805	COG0277	FAD linked oxidase domain protein
JLD64_RS14815	COG1686	Belongs to the peptidase S11 family
JLD64_RS14825	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS14830	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS14835	COG1538	Outer membrane efflux protein
JLD64_RS14840	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JLD64_RS14860	COG1346	cytolysis
JLD64_RS14865	COG0295	cytidine deaminase activity
JLD64_RS14870	COG2949	membrane
JLD64_RS14875	COG0174	glutamine synthetase
JLD64_RS14885	COG1129	ABC transporter
JLD64_RS14900	COG2311	Membrane
JLD64_RS14910	COG0477	Major facilitator Superfamily
JLD64_RS14920	COG4771	TonB-dependent receptor
JLD64_RS14925	COG0833	amino acid
JLD64_RS14930	COG0583	DNA-binding transcription factor activity
JLD64_RS14935	COG2855	membrane
JLD64_RS14940	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JLD64_RS14945	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS14945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLD64_RS14945	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JLD64_RS14950	COG1105	Belongs to the carbohydrate kinase PfkB family
JLD64_RS14955	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS14955	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS14970	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JLD64_RS14975	COG1312	Catalyzes the dehydration of D-mannonate
JLD64_RS14980	COG0246	Mannitol dehydrogenase
JLD64_RS14985	COG0523	cobalamin synthesis protein
JLD64_RS14990	COG0671	phosphoesterase, PA-phosphatase related
JLD64_RS14995	COG0791	NLP P60 protein
JLD64_RS15000	COG2200	EAL domain
JLD64_RS15005	COG4166	transmembrane transport
JLD64_RS15010	COG4174	ABC transporter (Permease)
JLD64_RS15015	COG4239	(ABC) transporter, permease
JLD64_RS15020	COG4172	Belongs to the ABC transporter superfamily
JLD64_RS15030	COG2814	Major facilitator Superfamily
JLD64_RS15035	COG1187	pseudouridine synthase activity
JLD64_RS15040	COG1061	Type III restriction enzyme res subunit
JLD64_RS15050	COG3081	Nucleoid-associated protein
JLD64_RS15055	COG3082	Protein of unknown function (DUF1414)
JLD64_RS15075	COG3182	Iron-regulated membrane protein
JLD64_RS15085	COG0579	oxidoreductase
JLD64_RS15090	COG0659	secondary active sulfate transmembrane transporter activity
JLD64_RS15095	COG2239	Acts as a magnesium transporter
JLD64_RS15100	COG4615	Cyclic peptide transporter
JLD64_RS15105	COG3145	DNA-N1-methyladenine dioxygenase activity
JLD64_RS15110	COG2169	Transcriptional regulator
JLD64_RS15110	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLD64_RS15125	COG2198	Histidine kinase
JLD64_RS15125	COG0642	Histidine kinase
JLD64_RS15130	COG2197	response regulator
JLD64_RS15145	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JLD64_RS15150	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JLD64_RS15160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLD64_RS15165	COG0584	glycerophosphoryl diester phosphodiesterase
JLD64_RS15170	COG2271	Major facilitator Superfamily
JLD64_RS15175	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JLD64_RS15180	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
JLD64_RS15185	COG0247	lactate metabolic process
JLD64_RS15230	COG1441	menaquinone biosynthetic process
JLD64_RS15240	COG0596	Alpha beta hydrolase
JLD64_RS15245	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JLD64_RS15250	COG1169	isochorismate synthase
JLD64_RS15255	COG4575	ribosome binding
JLD64_RS15260	COG2153	protein acetylation
JLD64_RS15265	COG1234	tRNA 3'-trailer cleavage
JLD64_RS15270	COG0784	Response regulator, receiver
JLD64_RS15270	COG0835	chemotaxis
JLD64_RS15275	COG1007	ATP synthesis coupled electron transport
JLD64_RS15280	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLD64_RS15285	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JLD64_RS15290	COG0713	ATP synthesis coupled electron transport
JLD64_RS15295	COG0839	Belongs to the complex I subunit 6 family
JLD64_RS15305	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JLD64_RS15335	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLD64_RS15340	COG0583	DNA-binding transcription factor activity
JLD64_RS15345	COG0436	Aminotransferase
JLD64_RS15355	COG0471	metal ion transport
JLD64_RS15355	COG0490	domain, Protein
JLD64_RS15360	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLD64_RS15385	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JLD64_RS15390	COG3959	Transketolase, thiamine diphosphate binding domain
JLD64_RS15395	COG3037	sugar-specific permease SgaT UlaA
JLD64_RS15405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS15410	COG1609	Transcriptional regulator
JLD64_RS15420	COG0622	Phosphoesterase
JLD64_RS15425	COG0625	glutathione transferase activity
JLD64_RS15430	COG0625	glutathione transferase activity
JLD64_RS15435	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JLD64_RS15440	COG1090	epimerase
JLD64_RS15445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLD64_RS15450	COG4598	ABC transporter
JLD64_RS15455	COG4160	amino acid transport
JLD64_RS15465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS15475	COG0163	prenyltransferase activity
JLD64_RS15480	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JLD64_RS15485	COG1286	toxin biosynthetic process
JLD64_RS15490	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JLD64_RS15495	COG0285	dihydrofolate synthase activity
JLD64_RS15505	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS15510	COG0101	tRNA pseudouridine synthase activity
JLD64_RS15515	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JLD64_RS15520	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JLD64_RS15535	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLD64_RS15540	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JLD64_RS15540	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JLD64_RS15550	COG3101	peptidyl-lysine hydroxylation
JLD64_RS15555	COG0730	response to heat
JLD64_RS15565	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JLD64_RS15575	COG2840	Smr protein MutS2
JLD64_RS15580	COG2062	phosphohistidine phosphatase, SixA
JLD64_RS15585	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLD64_RS15585	COG1024	Enoyl-CoA hydratase
JLD64_RS15595	COG3691	Protein conserved in bacteria
JLD64_RS15600	COG2067	long-chain fatty acid transport protein
JLD64_RS15610	COG2116	formate transmembrane transporter activity
JLD64_RS15680	COG1388	LysM domain
JLD64_RS15705	COG2885	chlorophyll binding
JLD64_RS15730	COG1560	Kdo2-lipid A biosynthetic process
JLD64_RS15740	COG0436	Aminotransferase
JLD64_RS15745	COG3275	phosphorelay sensor kinase activity
JLD64_RS15750	COG3279	Response regulator of the LytR AlgR family
JLD64_RS15755	COG0837	glucose binding
JLD64_RS15765	COG3961	Belongs to the TPP enzyme family
JLD64_RS15770	COG0667	Aldo Keto reductase
JLD64_RS15780	COG1914	H( )-stimulated, divalent metal cation uptake system
JLD64_RS15785	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JLD64_RS15790	COG2200	EAL domain
JLD64_RS15790	COG2199	diguanylate cyclase activity
JLD64_RS15805	COG3415	Transposase
JLD64_RS15810	COG3415	Transposase
JLD64_RS15815	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLD64_RS15850	COG0583	DNA-binding transcription factor activity
JLD64_RS15855	COG0385	Bile acid
JLD64_RS15860	COG3530	Putative quorum-sensing-regulated virulence factor
JLD64_RS15865	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JLD64_RS15870	COG3115	cell septum assembly
JLD64_RS15885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS15910	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JLD64_RS15915	COG4208	sulfate ABC transporter
JLD64_RS15920	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JLD64_RS15925	COG4150	thiosulfate binding
JLD64_RS15930	COG2837	iron assimilation
JLD64_RS15950	COG0860	N-Acetylmuramoyl-L-alanine amidase
JLD64_RS15955	COG0408	coproporphyrinogen oxidase activity
JLD64_RS15970	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JLD64_RS15975	COG5342	invasion associated locus B
JLD64_RS15980	COG0494	nUDIX hydrolase
JLD64_RS15985	COG3850	Histidine kinase
JLD64_RS15990	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS16000	COG1393	Belongs to the ArsC family
JLD64_RS16005	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JLD64_RS16015	COG0400	carboxylic ester hydrolase activity
JLD64_RS16025	COG2321	neutral zinc metallopeptidase
JLD64_RS16030	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JLD64_RS16035	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JLD64_RS16045	COG2716	regulation of RNA biosynthetic process
JLD64_RS16050	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JLD64_RS16055	COG0628	permease
JLD64_RS16060	COG4783	chaperone-mediated protein folding
JLD64_RS16065	COG1393	Belongs to the ArsC family
JLD64_RS16075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLD64_RS16080	COG1446	asparaginase
JLD64_RS16085	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JLD64_RS16095	COG2233	PERMEase
JLD64_RS16100	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JLD64_RS16105	COG2723	6-phospho-beta-galactosidase activity
JLD64_RS16115	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JLD64_RS16130	COG2200	EAL domain
JLD64_RS16160	COG3718	enzyme involved in inositol metabolism
JLD64_RS16170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS16175	COG0673	inositol 2-dehydrogenase activity
JLD64_RS16180	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS16195	COG0673	inositol 2-dehydrogenase activity
JLD64_RS16200	COG3962	Belongs to the TPP enzyme family
JLD64_RS16220	COG0517	IMP dehydrogenase activity
JLD64_RS16220	COG0516	GMP reductase activity
JLD64_RS16225	COG1570	exodeoxyribonuclease VII activity
JLD64_RS16240	COG1645	bacterial-type flagellum-dependent swarming motility
JLD64_RS16255	COG1160	GTP binding
JLD64_RS16265	COG2976	Protein conserved in bacteria
JLD64_RS16270	COG0124	histidyl-tRNA synthetase
JLD64_RS16285	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JLD64_RS16305	COG0437	4 iron, 4 sulfur cluster binding
JLD64_RS16310	COG0243	molybdopterin cofactor binding
JLD64_RS16315	COG4953	penicillin-binding protein 1C
JLD64_RS16320	COG2373	Large extracellular alpha-helical protein
JLD64_RS16325	COG1263	PTS System
JLD64_RS16325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS16325	COG2190	(PTS) system
JLD64_RS16335	COG2897	thiosulfate sulfurtransferase activity
JLD64_RS16340	COG1737	Transcriptional regulator
JLD64_RS16350	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JLD64_RS16355	COG2975	iron-sulfur cluster assembly
JLD64_RS16360	COG0633	Ferredoxin
JLD64_RS16365	COG0443	Heat shock 70 kDa protein
JLD64_RS16370	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JLD64_RS16375	COG0316	Belongs to the HesB IscA family
JLD64_RS16380	COG0822	iron-sulfur transferase activity
JLD64_RS16385	COG1104	cysteine desulfurase activity
JLD64_RS16390	COG1959	2 iron, 2 sulfur cluster binding
JLD64_RS16405	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JLD64_RS16410	COG3683	transport system, periplasmic component
JLD64_RS16415	COG3711	transcriptional antiterminator
JLD64_RS16420	COG2814	Major facilitator Superfamily
JLD64_RS16425	COG2259	Doxx family
JLD64_RS16435	COG1017	nitric oxide dioxygenase activity
JLD64_RS16435	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLD64_RS16440	COG0347	Belongs to the P(II) protein family
JLD64_RS16445	COG2204	response regulator
JLD64_RS16450	COG3170	Tfp pilus assembly protein FimV
JLD64_RS16455	COG2205	protein histidine kinase activity
JLD64_RS16460	COG0047	phosphoribosylformylglycinamidine synthase activity
JLD64_RS16460	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JLD64_RS16465	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JLD64_RS16475	COG0560	Phosphoserine phosphatase
JLD64_RS16480	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS16480	COG1263	PTS System
JLD64_RS16485	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JLD64_RS16490	COG1737	Transcriptional regulator
JLD64_RS16495	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLD64_RS16505	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JLD64_RS16510	COG1381	Involved in DNA repair and RecF pathway recombination
JLD64_RS16525	COG0681	Belongs to the peptidase S26 family
JLD64_RS16535	COG3086	response to oxidative stress
JLD64_RS16545	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
JLD64_RS16560	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JLD64_RS16565	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JLD64_RS16570	COG0513	Belongs to the DEAD box helicase family
JLD64_RS16575	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
JLD64_RS16585	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLD64_RS16590	COG3118	belongs to the thioredoxin family
JLD64_RS16595	COG3148	PFAM DTW domain containing protein
JLD64_RS16605	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JLD64_RS16610	COG5544	Lipoprotein
JLD64_RS16615	COG0477	Major facilitator Superfamily
JLD64_RS16645	COG0542	response to heat
JLD64_RS16660	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLD64_RS16665	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JLD64_RS16675	COG0077	Prephenate dehydratase
JLD64_RS16675	COG1605	Chorismate mutase
JLD64_RS16685	COG0287	Prephenate dehydrogenase
JLD64_RS16685	COG1605	Chorismate mutase
JLD64_RS16705	COG2199	diguanylate cyclase activity
JLD64_RS16710	COG2885	chlorophyll binding
JLD64_RS16765	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JLD64_RS16775	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JLD64_RS16780	COG4137	Cytochrome C assembly protein
JLD64_RS16785	COG4536	flavin adenine dinucleotide binding
JLD64_RS16795	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JLD64_RS16800	COG0497	DNA recombination
JLD64_RS16815	COG2867	negative regulation of translational initiation
JLD64_RS16830	COG2169	Transcriptional regulator
JLD64_RS16830	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLD64_RS16840	COG4221	oxidoreductase activity
JLD64_RS16870	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS16875	COG3549	Plasmid maintenance system killer
JLD64_RS16880	COG3093	addiction module antidote protein HigA
JLD64_RS16895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLD64_RS16900	COG0583	DNA-binding transcription factor activity
JLD64_RS16915	COG0402	S-adenosylhomocysteine deaminase activity
JLD64_RS16920	COG0549	Belongs to the carbamate kinase family
JLD64_RS16930	COG1304	FMN binding
JLD64_RS16935	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JLD64_RS16940	COG0666	response to abiotic stimulus
JLD64_RS16945	COG0583	DNA-binding transcription factor activity
JLD64_RS16950	COG0401	homolog of Blt101
JLD64_RS16955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLD64_RS16980	COG4575	ribosome binding
JLD64_RS16990	COG1780	Probably involved in ribonucleotide reductase function
JLD64_RS17005	COG4175	Glycine betaine
JLD64_RS17010	COG4176	ABC-type proline glycine betaine transport system permease component
JLD64_RS17020	COG2814	Major facilitator Superfamily
JLD64_RS17025	COG1846	Transcriptional regulator
JLD64_RS17030	COG1566	PFAM secretion protein HlyD family protein
JLD64_RS17035	COG2814	Major facilitator Superfamily
JLD64_RS17040	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JLD64_RS17055	COG2918	glutathione biosynthetic process
JLD64_RS17060	COG1238	metal cluster binding
JLD64_RS17065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLD64_RS17095	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JLD64_RS17100	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JLD64_RS17110	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JLD64_RS17115	COG1546	Belongs to the CinA family
JLD64_RS17125	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLD64_RS17135	COG2951	lytic endotransglycosylase activity
JLD64_RS17140	COG3730	PTS system glucitol sorbitol-specific
JLD64_RS17145	COG3732	PTS system glucitol sorbitol-specific
JLD64_RS17155	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS17160	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS17165	COG1349	DNA-binding transcription factor activity
JLD64_RS17175	COG3604	Transcriptional regulator
JLD64_RS17180	COG1773	rubredoxin
JLD64_RS17180	COG0426	domain, Protein
JLD64_RS17185	COG0446	pyridine nucleotide-disulphide oxidoreductase
JLD64_RS17190	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
JLD64_RS17195	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
JLD64_RS17200	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLD64_RS17205	COG1609	Transcriptional regulator
JLD64_RS17210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS17210	COG1263	PTS System
JLD64_RS17215	COG2723	6-phospho-beta-galactosidase activity
JLD64_RS17220	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JLD64_RS17230	COG3260	NADH ubiquinone oxidoreductase 20
JLD64_RS17235	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLD64_RS17240	COG3261	NADH dehydrogenase
JLD64_RS17240	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
JLD64_RS17245	COG0650	Formate hydrogenlyase subunit 4
JLD64_RS17250	COG0651	ATP synthesis coupled electron transport
JLD64_RS17255	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLD64_RS17270	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JLD64_RS17275	COG0298	carbon dioxide binding
JLD64_RS17280	COG0409	Hydrogenase expression formation protein
JLD64_RS17285	COG0309	Hydrogenase expression formation protein (HypE)
JLD64_RS17300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS17305	COG1120	ATPase activity
JLD64_RS17325	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JLD64_RS17335	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLD64_RS17340	COG0163	prenyltransferase activity
JLD64_RS17370	COG1388	LysM domain
JLD64_RS17370	COG4942	peptidase
JLD64_RS17385	COG0585	pseudouridine synthase activity
JLD64_RS17400	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JLD64_RS17410	COG0529	Catalyzes the synthesis of activated sulfate
JLD64_RS17430	COG2234	aminopeptidase activity
JLD64_RS17445	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JLD64_RS17450	COG0720	synthase
JLD64_RS17455	COG0602	queuosine metabolic process
JLD64_RS17460	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JLD64_RS17465	COG1263	PTS System
JLD64_RS17465	COG2190	(PTS) system
JLD64_RS17465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLD64_RS17470	COG1737	Transcriptional regulator
JLD64_RS17490	COG3956	TIGRFAM MazG family protein
JLD64_RS17495	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JLD64_RS17500	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLD64_RS17505	COG4999	Histidine kinase
JLD64_RS17505	COG3850	Histidine kinase
JLD64_RS17505	COG3437	response regulator, receiver
JLD64_RS17505	COG2205	protein histidine kinase activity
JLD64_RS17510	COG1929	Belongs to the glycerate kinase type-1 family
JLD64_RS17515	COG4948	Mandelate Racemase Muconate Lactonizing
JLD64_RS17520	COG4948	Mandelate Racemase Muconate Lactonizing
JLD64_RS17525	COG2271	Major facilitator Superfamily
JLD64_RS17530	COG0716	FMN binding
JLD64_RS17535	COG0564	pseudouridine synthase activity
JLD64_RS17540	COG3098	single-species biofilm formation
JLD64_RS17555	COG1611	Belongs to the LOG family
JLD64_RS17560	COG0814	amino acid
JLD64_RS17565	COG1760	l-serine dehydratase
JLD64_RS17575	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
JLD64_RS17580	COG2363	Small membrane protein
JLD64_RS17585	COG0583	DNA-binding transcription factor activity
JLD64_RS17595	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JLD64_RS17600	COG2166	iron-sulfur cluster assembly
JLD64_RS17605	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JLD64_RS17610	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JLD64_RS17620	COG0860	N-Acetylmuramoyl-L-alanine amidase
JLD64_RS17625	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JLD64_RS17625	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JLD64_RS17630	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JLD64_RS17635	COG1074	ATP-dependent DNA helicase activity
JLD64_RS17645	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JLD64_RS17650	COG4967	type IV pilus modification protein PilV
JLD64_RS17660	COG4795	General secretion pathway protein
JLD64_RS17665	COG2165	general secretion pathway protein
JLD64_RS17670	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JLD64_RS17675	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JLD64_RS17685	COG0494	nUDIX hydrolase
JLD64_RS17690	COG3066	DNA modification
JLD64_RS17700	COG0667	Aldo Keto reductase
JLD64_RS17705	COG0477	Major facilitator Superfamily
JLD64_RS17710	COG0204	Acyl-transferase
JLD64_RS17710	COG0318	PFAM AMP-dependent synthetase and ligase
JLD64_RS17715	COG1609	Transcriptional regulator
JLD64_RS17725	COG1609	Transcriptional regulator
JLD64_RS17735	COG0583	DNA-binding transcription factor activity
JLD64_RS17740	COG1794	racemase activity, acting on amino acids and derivatives
JLD64_RS17750	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
JLD64_RS17755	COG2814	Major facilitator Superfamily
JLD64_RS17760	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS17770	COG0183	Belongs to the thiolase family
JLD64_RS17785	COG0814	amino acid
JLD64_RS17790	COG2388	GCN5-related N-acetyl-transferase
JLD64_RS17795	COG3592	Divergent 4Fe-4S mono-cluster
JLD64_RS17805	COG4565	transcriptional regulatory protein
JLD64_RS17815	COG4208	sulfate ABC transporter
JLD64_RS17820	COG3842	ATPase activity
JLD64_RS17850	COG4942	peptidase
JLD64_RS17855	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JLD64_RS17860	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JLD64_RS17870	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JLD64_RS17880	COG4974	Belongs to the 'phage' integrase family
JLD64_RS17895	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JLD64_RS17900	COG0354	folic acid binding
JLD64_RS17905	COG1272	protein, Hemolysin III
JLD64_RS17910	COG1737	Transcriptional regulator
JLD64_RS17915	COG2723	6-phospho-beta-galactosidase activity
JLD64_RS17920	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS17925	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JLD64_RS17925	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JLD64_RS17935	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JLD64_RS17940	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLD64_RS17945	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLD64_RS17950	COG0006	proline dipeptidase activity
JLD64_RS17960	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JLD64_RS17970	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JLD64_RS17975	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JLD64_RS17980	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JLD64_RS17985	COG0583	DNA-binding transcription factor activity
JLD64_RS17990	COG2968	Membrane
JLD64_RS17995	COG1279	arginine transmembrane transporter activity
JLD64_RS18000	COG0668	transmembrane transport
JLD64_RS18005	COG0191	fructose-bisphosphate aldolase activity
JLD64_RS18010	COG0126	phosphoglycerate kinase activity
JLD64_RS18015	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JLD64_RS18020	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JLD64_RS18025	COG0501	Belongs to the peptidase M48B family
JLD64_RS18045	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
JLD64_RS18050	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS18055	COG2267	carboxylic ester hydrolase activity
JLD64_RS18065	COG2814	Major facilitator Superfamily
JLD64_RS18080	COG1414	Transcriptional regulator
JLD64_RS18085	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS18100	COG2146	nitrite reductase [NAD(P)H] activity
JLD64_RS18110	COG0010	Belongs to the arginase family
JLD64_RS18115	COG1166	arginine decarboxylase activity
JLD64_RS18140	COG2814	Major facilitator Superfamily
JLD64_RS18145	COG3091	SprT-like family
JLD64_RS18150	COG2356	endonuclease I
JLD64_RS18155	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JLD64_RS18170	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JLD64_RS18175	COG2805	Type II/IV secretion system protein
JLD64_RS18180	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JLD64_RS18185	COG0762	integral membrane protein
JLD64_RS18190	COG1872	DUF167
JLD64_RS18200	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JLD64_RS18205	COG2852	Protein conserved in bacteria
JLD64_RS18210	COG3415	Transposase
JLD64_RS18210	COG2801	Transposase and inactivated derivatives
JLD64_RS18220	COG3171	Protein conserved in bacteria
JLD64_RS18230	COG1194	a g-specific adenine glycosylase
JLD64_RS18240	COG0741	lytic transglycosylase activity
JLD64_RS18245	COG2211	Major facilitator Superfamily
JLD64_RS18250	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
JLD64_RS18270	COG3052	prosthetic group binding
JLD64_RS18280	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLD64_RS18285	COG3493	citrate carrier protein
JLD64_RS18300	COG1982	Orn Lys Arg decarboxylase major
JLD64_RS18305	COG1811	Na channel or pump
JLD64_RS18325	COG0784	Response regulator, receiver
JLD64_RS18325	COG2205	protein histidine kinase activity
JLD64_RS18325	COG2198	Histidine kinase
JLD64_RS18330	COG2197	response regulator
JLD64_RS18350	COG0457	Tetratricopeptide repeat
JLD64_RS18355	COG0726	polysaccharide deacetylase
JLD64_RS18355	COG1649	PFAM Uncharacterised BCR, COG1649
JLD64_RS18360	COG1215	transferase activity, transferring glycosyl groups
JLD64_RS18370	COG0754	glutathionylspermidine amidase activity
JLD64_RS18375	COG4608	Belongs to the ABC transporter superfamily
JLD64_RS18380	COG0444	Belongs to the ABC transporter superfamily
JLD64_RS18385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLD64_RS18390	COG0601	transmembrane transport
JLD64_RS18400	COG0625	glutathione transferase activity
JLD64_RS18415	COG0667	Aldo Keto reductase
JLD64_RS18420	COG2862	Uncharacterized protein family, UPF0114
JLD64_RS18440	COG0848	biopolymer transport protein
JLD64_RS18450	COG0626	cystathionine gamma-synthase activity
JLD64_RS18455	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS18460	COG2207	Transcriptional regulator
JLD64_RS18465	COG1979	alcohol dehydrogenase
JLD64_RS18475	COG1032	radical SAM domain protein
JLD64_RS18495	COG3111	PFAM Bacterial OB fold (BOF) protein
JLD64_RS18510	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLD64_RS18515	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JLD64_RS18520	COG1652	LysM domain
JLD64_RS18525	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JLD64_RS18530	COG2211	Major facilitator Superfamily
JLD64_RS18555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS18560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLD64_RS18565	COG1120	ATPase activity
JLD64_RS18570	COG4774	siderophore transport
JLD64_RS18575	COG0187	DNA topoisomerase II activity
JLD64_RS18580	COG3150	esterase
JLD64_RS18585	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JLD64_RS18590	COG3151	Protein conserved in bacteria
JLD64_RS18595	COG0494	nUDIX hydrolase
JLD64_RS18610	COG0754	glutathionylspermidine amidase activity
JLD64_RS18615	COG3384	dioxygenase
JLD64_RS18625	COG3539	Fimbrial protein
JLD64_RS18630	COG3188	usher protein
JLD64_RS18635	COG3121	Chaperone
JLD64_RS18640	COG3539	Fimbrial protein
JLD64_RS18645	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JLD64_RS18655	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JLD64_RS18655	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JLD64_RS18665	COG3025	triphosphatase activity
JLD64_RS18670	COG4991	sh3 domain protein
JLD64_RS18675	COG0617	tRNA 3'-terminal CCA addition
JLD64_RS18685	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JLD64_RS18695	COG0477	Major facilitator Superfamily
JLD64_RS18700	COG1846	Transcriptional regulator
JLD64_RS18705	COG0657	acetylesterase activity
JLD64_RS18710	COG0829	nickel cation binding
JLD64_RS18715	COG0831	urea catabolic process
JLD64_RS18720	COG0832	Belongs to the urease beta subunit family
JLD64_RS18725	COG0804	urea catabolic process
JLD64_RS18730	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
JLD64_RS18740	COG0830	nickel cation binding
JLD64_RS18745	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JLD64_RS18755	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JLD64_RS18760	COG0358	DNA primase activity
JLD64_RS18770	COG3663	DNA glycosylase
JLD64_RS18790	COG2375	cellular response to nickel ion
JLD64_RS18795	COG1695	Transcriptional regulator
JLD64_RS18800	COG0840	transmembrane signaling receptor activity
JLD64_RS18805	COG0840	transmembrane signaling receptor activity
JLD64_RS18810	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JLD64_RS18820	COG3121	Chaperone
JLD64_RS18825	COG3188	usher protein
JLD64_RS18835	COG3539	Fimbrial protein
JLD64_RS18840	COG3539	Fimbrial protein
JLD64_RS18845	COG3121	Chaperone
JLD64_RS18855	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JLD64_RS18860	COG1830	Aldolase
JLD64_RS18865	COG1879	ABC-type sugar transport system periplasmic component
JLD64_RS18870	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS18875	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS18880	COG1129	ABC transporter
JLD64_RS18885	COG2390	Transcriptional regulator
JLD64_RS18890	COG1070	Carbohydrate kinase
JLD64_RS18895	COG0446	pyridine nucleotide-disulphide oxidoreductase
JLD64_RS18895	COG1902	pentaerythritol trinitrate reductase activity
JLD64_RS18905	COG1451	nucleotide metabolic process
JLD64_RS18910	COG0673	inositol 2-dehydrogenase activity
JLD64_RS18915	COG0861	Integral membrane protein TerC family
JLD64_RS18925	COG2721	sulfolactate sulfo-lyase activity
JLD64_RS18935	COG2271	Major facilitator Superfamily
JLD64_RS18940	COG2186	Transcriptional regulator
JLD64_RS18945	COG0586	Pfam SNARE associated Golgi protein
JLD64_RS18955	COG1422	Protein of unknown function (DUF1090)
JLD64_RS18960	COG4575	ribosome binding
JLD64_RS18965	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
JLD64_RS18975	COG2259	Doxx family
JLD64_RS18980	COG0435	Glutathione S-transferase
JLD64_RS18985	COG3152	Membrane
JLD64_RS18990	COG0583	DNA-binding transcription factor activity
JLD64_RS18995	COG1741	Belongs to the pirin family
JLD64_RS19005	COG0814	amino acid
JLD64_RS19010	COG1882	Formate acetyltransferase
JLD64_RS19015	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JLD64_RS19020	COG0814	amino acid
JLD64_RS19025	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JLD64_RS19030	COG0583	DNA-binding transcription factor activity
JLD64_RS19040	COG2084	Dehydrogenase
JLD64_RS19050	COG2721	sulfolactate sulfo-lyase activity
JLD64_RS19065	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS19070	COG3414	Phosphotransferase system galactitol-specific IIB component
JLD64_RS19075	COG3775	system Galactitol-specific IIC component
JLD64_RS19080	COG1063	alcohol dehydrogenase
JLD64_RS19090	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JLD64_RS19095	COG3107	peptidoglycan biosynthetic process
JLD64_RS19100	COG0792	nuclease activity
JLD64_RS19105	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JLD64_RS19110	COG2823	Periplasmic or secreted lipoprotein
JLD64_RS19115	COG0701	Predicted permease
JLD64_RS19120	COG0702	epimerase
JLD64_RS19125	COG0693	protein deglycase activity
JLD64_RS19130	COG3787	Belongs to the UPF0306 family
JLD64_RS19135	COG2827	Endonuclease containing a URI domain
JLD64_RS19140	COG3153	acetyltransferase
JLD64_RS19145	COG3154	lipid carrier protein
JLD64_RS19150	COG0826	peptidase U32
JLD64_RS19155	COG0826	peptidase U32
JLD64_RS19160	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLD64_RS19165	COG0814	amino acid
JLD64_RS19170	COG0513	Belongs to the DEAD box helicase family
JLD64_RS19190	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JLD64_RS19195	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JLD64_RS19200	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JLD64_RS19205	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JLD64_RS19225	COG0137	argininosuccinate synthase activity
JLD64_RS19235	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JLD64_RS19240	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JLD64_RS19245	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JLD64_RS19250	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JLD64_RS19255	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JLD64_RS19260	COG1534	Rna-binding protein
JLD64_RS19270	COG2027	D-alanyl-D-alanine carboxypeptidase
JLD64_RS19275	COG0745	RESPONSE REGULATOR receiver
JLD64_RS19280	COG0642	Histidine kinase
JLD64_RS19285	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JLD64_RS19290	COG0697	spore germination
JLD64_RS19300	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JLD64_RS19305	COG0142	geranyltranstransferase activity
JLD64_RS19310	COG3423	Transcriptional regulator
JLD64_RS19315	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JLD64_RS19320	COG5007	Belongs to the BolA IbaG family
JLD64_RS19325	COG3113	response to antibiotic
JLD64_RS19330	COG2854	intermembrane phospholipid transfer
JLD64_RS19335	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JLD64_RS19340	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JLD64_RS19345	COG1127	ABC transporter
JLD64_RS19350	COG0530	calcium, potassium:sodium antiporter activity
JLD64_RS19360	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JLD64_RS19365	COG3117	lipopolysaccharide transmembrane transporter activity
JLD64_RS19370	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JLD64_RS19375	COG1137	ATPase activity
JLD64_RS19380	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JLD64_RS19400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLD64_RS19410	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JLD64_RS19415	COG2198	Histidine kinase
JLD64_RS19415	COG0784	Response regulator, receiver
JLD64_RS19415	COG5002	protein histidine kinase activity
JLD64_RS19420	COG0795	lipopolysaccharide-transporting ATPase activity
JLD64_RS19425	COG0795	lipopolysaccharide-transporting ATPase activity
JLD64_RS19430	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JLD64_RS19435	COG2927	DNA polymerase III (CHI subunit)
JLD64_RS19450	COG1064	alcohol dehydrogenase
JLD64_RS19460	COG0433	COG0433 Predicted ATPase
JLD64_RS19465	COG1242	4 iron, 4 sulfur cluster binding
JLD64_RS19470	COG0069	glutamate synthase activity
JLD64_RS19470	COG0067	glutamate synthase
JLD64_RS19470	COG0070	glutamate synthase
JLD64_RS19475	COG0493	'glutamate synthase
JLD64_RS19490	COG2969	positive regulation of protein catabolic process
JLD64_RS19495	COG0625	glutathione transferase activity
JLD64_RS19500	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JLD64_RS19510	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JLD64_RS19515	COG3105	Protein conserved in bacteria
JLD64_RS19520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JLD64_RS19525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JLD64_RS19535	COG1438	arginine binding
JLD64_RS19550	COG2732	(Barnase) inhibitor
JLD64_RS19560	COG1289	transmembrane transporter activity
JLD64_RS19575	COG0583	DNA-binding transcription factor activity
JLD64_RS19580	COG3477	response to acidic pH
JLD64_RS19585	COG0312	modulator of DNA gyrase
JLD64_RS19590	COG3164	Protein of unknown function
JLD64_RS19605	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JLD64_RS19610	COG1792	Involved in formation and maintenance of cell shape
JLD64_RS19615	COG1077	Cell shape determining protein MreB Mrl
JLD64_RS19620	COG2199	diguanylate cyclase activity
JLD64_RS19620	COG2200	EAL domain
JLD64_RS19625	COG0604	alcohol dehydrogenase
JLD64_RS19635	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JLD64_RS19640	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JLD64_RS19645	COG0511	ligase activity, forming carbon-carbon bonds
JLD64_RS19650	COG0439	Biotin carboxylase
JLD64_RS19655	COG3924	membrane
JLD64_RS19660	COG4145	pantothenate transmembrane transporter activity
JLD64_RS19695	COG1309	transcriptional regulator
JLD64_RS19700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLD64_RS19705	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLD64_RS19715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLD64_RS19720	COG4597	amino acid ABC transporter
JLD64_RS19725	COG0765	amino acid transport
JLD64_RS19730	COG1126	abc transporter atp-binding protein
JLD64_RS19765	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLD64_RS19775	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JLD64_RS19780	COG0009	L-threonylcarbamoyladenylate synthase
JLD64_RS19785	COG0551	DNA topoisomerase type I activity
JLD64_RS19790	COG2922	Belongs to the Smg family
JLD64_RS19795	COG0758	DNA mediated transformation
JLD64_RS19800	COG0242	peptide deformylase activity
JLD64_RS19805	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JLD64_RS19810	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JLD64_RS19810	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JLD64_RS19825	COG3036	rescue of stalled ribosome
JLD64_RS19830	COG0789	Transcriptional regulator
JLD64_RS19845	COG0202	RNA polymerase activity
JLD64_RS19855	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JLD64_RS19870	COG0201	protein transport
JLD64_RS19880	COG1841	ribosomal large subunit assembly
JLD64_RS19895	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JLD64_RS19900	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JLD64_RS19930	COG0255	Belongs to the universal ribosomal protein uL29 family
JLD64_RS19935	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JLD64_RS19975	COG0051	transcription antitermination factor activity, RNA binding
JLD64_RS20015	COG2168	tRNA wobble position uridine thiolation
JLD64_RS20020	COG2923	Belongs to the DsrF TusC family
JLD64_RS20025	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JLD64_RS20030	COG2964	Protein conserved in bacteria
JLD64_RS20035	COG0545	Peptidyl-prolyl cis-trans isomerase
JLD64_RS20045	COG1047	Peptidyl-prolyl cis-trans
JLD64_RS20050	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JLD64_RS20055	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLD64_RS20055	COG0475	glutathione-regulated potassium exporter activity
JLD64_RS20060	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLD64_RS20065	COG0488	(ABC) transporter
JLD64_RS20070	COG0429	hydrolase of the alpha beta-hydrolase fold
JLD64_RS20075	COG3089	Belongs to the UPF0270 family
JLD64_RS20080	COG3954	Phosphoribulokinase
JLD64_RS20085	COG1765	OsmC-like protein
JLD64_RS20095	COG1289	transmembrane transporter activity
JLD64_RS20100	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JLD64_RS20105	COG0512	Glutamine amidotransferase of anthranilate synthase
JLD64_RS20110	COG2184	nucleotidyltransferase activity
JLD64_RS20120	COG0738	Major facilitator superfamily
JLD64_RS20125	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JLD64_RS20135	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JLD64_RS20135	COG1648	precorrin-2 dehydrogenase activity
JLD64_RS20145	COG0180	Tryptophanyl-tRNA synthetase
JLD64_RS20155	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JLD64_RS20160	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JLD64_RS20165	COG3266	domain, Protein
JLD64_RS20170	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JLD64_RS20175	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JLD64_RS20180	COG4796	Type ii and iii secretion system protein
JLD64_RS20200	COG4972	Pilus assembly protein
JLD64_RS20205	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JLD64_RS20210	COG0494	nUDIX hydrolase
JLD64_RS20220	COG1011	Hydrolase
JLD64_RS20225	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JLD64_RS20230	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JLD64_RS20235	COG2801	Transposase and inactivated derivatives
JLD64_RS20235	COG3415	Transposase
JLD64_RS20240	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JLD64_RS20255	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JLD64_RS20260	COG2183	response to ionizing radiation
JLD64_RS20265	COG1918	ferrous iron import across plasma membrane
JLD64_RS20290	COG1040	competence protein
JLD64_RS20300	COG2610	gluconate transmembrane transporter activity
JLD64_RS20305	COG1640	4-alpha-glucanotransferase
JLD64_RS20310	COG0058	SHG alpha-glucan phosphorylase activity
JLD64_RS20315	COG2909	trisaccharide binding
JLD64_RS20320	COG1349	DNA-binding transcription factor activity
JLD64_RS20325	COG0705	Rhomboid family
JLD64_RS20330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLD64_RS20335	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JLD64_RS20340	COG0058	SHG alpha-glucan phosphorylase activity
JLD64_RS20345	COG0297	glycogen (starch) synthase activity
JLD64_RS20350	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JLD64_RS20355	COG1523	belongs to the glycosyl hydrolase 13 family
JLD64_RS20360	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JLD64_RS20365	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JLD64_RS20370	COG2095	MarC family integral membrane protein
JLD64_RS20375	COG0425	Belongs to the sulfur carrier protein TusA family
JLD64_RS20380	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JLD64_RS20390	COG0477	Major facilitator Superfamily
JLD64_RS20395	COG0628	permease
JLD64_RS20425	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JLD64_RS20435	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JLD64_RS20435	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLD64_RS20445	COG1216	Glycosyl transferase, family 2
JLD64_RS20470	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLD64_RS20480	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS20485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLD64_RS20530	COG3479	Phenolic acid decarboxylase
JLD64_RS20540	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS20545	COG0791	NLP P60 protein
JLD64_RS20560	COG3539	Fimbrial protein
JLD64_RS20565	COG3121	Chaperone
JLD64_RS20585	COG2081	HI0933 family
JLD64_RS20590	COG0306	phosphate transporter
JLD64_RS20610	COG0589	response to stress
JLD64_RS20615	COG0742	ribosomal rna small subunit methyltransferase
JLD64_RS20620	COG0339	signal peptide processing
JLD64_RS20625	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JLD64_RS20630	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JLD64_RS20645	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLD64_RS20655	COG2197	response regulator
JLD64_RS20660	COG1028	Short-chain dehydrogenase reductase Sdr
JLD64_RS20665	COG0583	DNA-binding transcription factor activity
JLD64_RS20670	COG1295	ribonuclease BN
JLD64_RS20675	COG0477	Major facilitator Superfamily
JLD64_RS20680	COG2982	Protein involved in outer membrane biogenesis
JLD64_RS20685	COG2200	EAL domain
JLD64_RS20695	COG0612	Peptidase, M16
JLD64_RS20700	COG1301	dicarboxylic acid transport
JLD64_RS20705	COG2199	diguanylate cyclase activity
JLD64_RS20705	COG2200	EAL domain
JLD64_RS20710	COG0457	Tetratricopeptide repeat
JLD64_RS20710	COG3118	belongs to the thioredoxin family
JLD64_RS20715	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JLD64_RS20720	COG1215	transferase activity, transferring glycosyl groups
JLD64_RS20725	COG1215	transferase activity, transferring glycosyl groups
JLD64_RS20750	COG2194	sulfuric ester hydrolase activity
JLD64_RS20760	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JLD64_RS20780	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
JLD64_RS20790	COG1739	Uncharacterized protein family UPF0029
JLD64_RS20795	COG0006	proline dipeptidase activity
JLD64_RS20800	COG1024	Enoyl-CoA hydratase
JLD64_RS20800	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLD64_RS20805	COG0183	Belongs to the thiolase family
JLD64_RS20815	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLD64_RS20830	COG0805	protein transport
JLD64_RS20835	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLD64_RS20840	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLD64_RS20845	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JLD64_RS20855	COG2226	methyltransferase
JLD64_RS20860	COG1322	Protein conserved in bacteria
JLD64_RS20870	COG0412	Dienelactone hydrolase
JLD64_RS20880	COG0583	DNA-binding transcription factor activity
JLD64_RS20885	COG0697	spore germination
JLD64_RS20890	COG0561	phosphatase activity
JLD64_RS20895	COG2267	carboxylic ester hydrolase activity
JLD64_RS20900	COG1280	lysine exporter protein (LysE YggA)
JLD64_RS20905	COG1280	lysine exporter protein (LysE YggA)
JLD64_RS20935	COG0210	DNA helicase
JLD64_RS20940	COG1011	Hydrolase
JLD64_RS20975	COG0181	hydroxymethylbilane synthase activity
JLD64_RS20985	COG2959	enzyme of heme biosynthesis
JLD64_RS20990	COG3071	HemY protein
JLD64_RS21025	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JLD64_RS21040	COG2244	polysaccharide biosynthetic process
JLD64_RS21045	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JLD64_RS21050	COG0456	acetyltransferase
JLD64_RS21055	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JLD64_RS21060	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JLD64_RS21070	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JLD64_RS21075	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JLD64_RS21080	COG3118	belongs to the thioredoxin family
JLD64_RS21090	COG0248	Ppx GppA phosphatase
JLD64_RS21100	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JLD64_RS21110	COG0583	DNA-binding transcription factor activity
JLD64_RS21115	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JLD64_RS21125	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JLD64_RS21130	COG3978	acetolactate synthase activity
JLD64_RS21155	COG3085	chromosome segregation
JLD64_RS21205	COG4206	TonB-dependent receptor
JLD64_RS21210	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLD64_RS21230	COG0583	DNA-binding transcription factor activity
JLD64_RS21235	COG0165	Argininosuccinate lyase
JLD64_RS21245	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JLD64_RS21250	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JLD64_RS21255	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JLD64_RS21260	COG2207	Transcriptional regulator
JLD64_RS21270	COG0371	Dehydrogenase
JLD64_RS21275	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JLD64_RS21285	COG0527	aspartate kinase activity
JLD64_RS21285	COG0460	homoserine dehydrogenase
JLD64_RS21290	COG0626	cystathionine gamma-synthase activity
JLD64_RS21300	COG0254	rRNA binding
JLD64_RS21305	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JLD64_RS21310	COG1609	Transcriptional regulator
JLD64_RS21315	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JLD64_RS21330	COG1575	Belongs to the MenA family. Type 1 subfamily
JLD64_RS21340	COG3074	FtsZ-dependent cytokinesis
JLD64_RS21345	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JLD64_RS21350	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JLD64_RS21355	COG1494	fructose-1,6-bisphosphatase
JLD64_RS21365	COG3152	Membrane
JLD64_RS21375	COG0149	triose-phosphate isomerase activity
JLD64_RS21385	COG2134	cdp-diacylglycerol pyrophosphatase
JLD64_RS21395	COG0205	6-phosphofructokinase activity
JLD64_RS21405	COG3678	ATP-independent chaperone mediated protein folding
JLD64_RS21410	COG0745	RESPONSE REGULATOR receiver
JLD64_RS21415	COG2205	protein histidine kinase activity
JLD64_RS21420	COG2258	MOSC domain
JLD64_RS21425	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JLD64_RS21435	COG1917	Cupin 2, conserved barrel domain protein
JLD64_RS21435	COG4977	sequence-specific DNA binding
JLD64_RS21440	COG4977	sequence-specific DNA binding
JLD64_RS21445	COG1070	Carbohydrate kinase
JLD64_RS21450	COG4806	L-rhamnose isomerase
JLD64_RS21455	COG0235	Class ii aldolase
JLD64_RS21460	COG1454	alcohol dehydrogenase
JLD64_RS21465	COG3254	rhamnose metabolic process
JLD64_RS21470	COG2211	Major facilitator Superfamily
JLD64_RS21490	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JLD64_RS21515	COG0437	4 iron, 4 sulfur cluster binding
JLD64_RS21520	COG2864	formate dehydrogenase
JLD64_RS21525	COG3058	Necessary for formate dehydrogenase activity
JLD64_RS21535	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JLD64_RS21545	COG0456	acetyltransferase
JLD64_RS21560	COG1011	Hydrolase
JLD64_RS21585	COG1349	DNA-binding transcription factor activity
JLD64_RS21590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS21600	COG3684	Belongs to the aldolase LacD family
JLD64_RS21610	COG1501	Belongs to the glycosyl hydrolase 31 family
JLD64_RS21625	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JLD64_RS21640	COG3852	Histidine kinase
JLD64_RS21655	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JLD64_RS21660	COG3078	GTPase activator activity
JLD64_RS21675	COG0204	Acyl-transferase
JLD64_RS21685	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JLD64_RS21690	COG3084	Protein conserved in bacteria
JLD64_RS21695	COG0746	molybdenum cofactor guanylyltransferase activity
JLD64_RS21700	COG1763	Mo-molybdopterin cofactor biosynthetic process
JLD64_RS21725	COG2186	Transcriptional regulator
JLD64_RS21730	COG0477	Major facilitator Superfamily
JLD64_RS21735	COG1609	Transcriptional regulator
JLD64_RS21740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLD64_RS21745	COG1879	ABC-type sugar transport system periplasmic component
JLD64_RS21750	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLD64_RS21755	COG1129	ABC transporter
JLD64_RS21760	COG1869	D-ribose catabolic process
JLD64_RS21765	COG3158	transport of potassium into the cell
JLD64_RS21775	COG2425	protein containing a von Willebrand factor type A (vWA) domain
JLD64_RS21780	COG2502	aspartate--ammonia ligase
JLD64_RS21785	COG1522	sequence-specific DNA binding
JLD64_RS21790	COG0716	FMN binding
JLD64_RS21795	COG0445	tRNA wobble uridine modification
JLD64_RS21800	COG0357	Ribosomal RNA small subunit methyltransferase G
JLD64_RS21805	COG3312	ion transport
JLD64_RS21810	COG0356	it plays a direct role in the translocation of protons across the membrane
JLD64_RS21820	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JLD64_RS21825	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JLD64_RS21840	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JLD64_RS21845	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JLD64_RS21850	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JLD64_RS21865	COG3121	Chaperone
JLD64_RS21880	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JLD64_RS21885	COG0573	inorganic phosphate transmembrane transporter activity
JLD64_RS21890	COG0581	inorganic phosphate transmembrane transporter activity
JLD64_RS21895	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JLD64_RS21900	COG0704	Plays a role in the regulation of phosphate uptake
JLD64_RS21905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLD64_RS21910	COG2252	PERMEase
JLD64_RS21915	COG0431	NADPH-dependent FMN reductase
JLD64_RS21920	COG2091	lysine biosynthetic process via aminoadipic acid
JLD64_RS21935	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JLD64_RS21940	COG0706	membrane insertase activity