locus-tag class description LI64_RS00005 PF00308 Bacterial dnaA protein LI64_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LI64_RS00005 PF11638 DnaA N-terminal domain LI64_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LI64_RS00010 PF02767 DNA polymerase III beta subunit, central domain LI64_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LI64_RS00015 PF02463 RecF/RecN/SMC N terminal domain LI64_RS00020 PF01751 Toprim domain LI64_RS00020 PF18053 DNA gyrase B subunit insert domain LI64_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LI64_RS00020 PF00204 DNA gyrase B LI64_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS00025 PF00392 Bacterial regulatory proteins, gntR family LI64_RS00025 PF07729 FCD domain LI64_RS00030 PF13378 Enolase C-terminal domain-like LI64_RS00030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS00035 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS00035 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS00040 PF00107 Zinc-binding dehydrogenase LI64_RS00040 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS00045 PF02615 Malate/L-lactate dehydrogenase LI64_RS00050 PF07690 Major Facilitator Superfamily LI64_RS00060 PF07729 FCD domain LI64_RS00060 PF00392 Bacterial regulatory proteins, gntR family LI64_RS00065 PF05035 2-keto-3-deoxy-galactonokinase LI64_RS00070 PF01081 KDPG and KHG aldolase LI64_RS00075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS00075 PF13378 Enolase C-terminal domain-like LI64_RS00080 PF07690 Major Facilitator Superfamily LI64_RS00085 PF07676 WD40-like Beta Propeller Repeat LI64_RS00085 PF12566 Protein of unknown function (DUF3748) LI64_RS00090 PF07119 Protein of unknown function (DUF1375) LI64_RS00095 PF00011 Hsp20/alpha crystallin family LI64_RS00100 PF00011 Hsp20/alpha crystallin family LI64_RS00105 PF02080 TrkA-C domain LI64_RS00105 PF06826 Predicted Permease Membrane Region LI64_RS00120 PF03611 PTS system sugar-specific permease component LI64_RS00130 PF07702 UTRA domain LI64_RS00130 PF00392 Bacterial regulatory proteins, gntR family LI64_RS00135 PF00367 phosphotransferase system, EIIB LI64_RS00135 PF02378 Phosphotransferase system, EIIC LI64_RS00140 PF02056 Family 4 glycosyl hydrolase LI64_RS00140 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI64_RS00145 PF02656 Domain of unknown function (DUF202) LI64_RS00150 PF02656 Domain of unknown function (DUF202) LI64_RS00155 PF13186 Iron-sulfur cluster-binding domain LI64_RS00155 PF04055 Radical SAM superfamily LI64_RS00160 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS00175 PF07690 Major Facilitator Superfamily LI64_RS00195 PF01381 Helix-turn-helix LI64_RS00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS00200 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS00200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS00205 PF01842 ACT domain LI64_RS00210 PF00072 Response regulator receiver domain LI64_RS00210 PF00196 Bacterial regulatory proteins, luxR family LI64_RS00215 PF07730 Histidine kinase LI64_RS00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS00215 PF05231 MASE1 LI64_RS00220 PF07690 Major Facilitator Superfamily LI64_RS00225 PF07690 Major Facilitator Superfamily LI64_RS00230 PF00561 alpha/beta hydrolase fold LI64_RS00235 PF06711 Protein of unknown function (DUF1198) LI64_RS00240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS00240 PF03466 LysR substrate binding domain LI64_RS00260 PF07690 Major Facilitator Superfamily LI64_RS00265 PF02803 Thiolase, C-terminal domain LI64_RS00265 PF00108 Thiolase, N-terminal domain LI64_RS00270 PF00248 Aldo/keto reductase family LI64_RS00275 PF07690 Major Facilitator Superfamily LI64_RS00280 PF00892 EamA-like transporter family LI64_RS00285 PF02264 LamB porin LI64_RS00290 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI64_RS00295 PF00232 Glycosyl hydrolase family 1 LI64_RS00300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS00300 PF02378 Phosphotransferase system, EIIC LI64_RS00305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS00310 PF00356 Bacterial regulatory proteins, lacI family LI64_RS00320 PF00583 Acetyltransferase (GNAT) family LI64_RS00325 PF00440 Bacterial regulatory proteins, tetR family LI64_RS00325 PF13977 BetI-type transcriptional repressor, C-terminal LI64_RS00330 PF07690 Major Facilitator Superfamily LI64_RS00335 PF13737 Transposase DDE domain LI64_RS00340 PF01850 PIN domain LI64_RS00350 PF03180 NLPA lipoprotein LI64_RS00380 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS00380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS00400 PF16449 Fimbrillin MatB LI64_RS00405 PF18649 EcpB C-terminal domain LI64_RS00410 PF16967 E-set like domain LI64_RS00410 PF15976 CS1-pili formation C-terminal LI64_RS00435 PF00664 ABC transporter transmembrane region LI64_RS00435 PF03412 Peptidase C39 family LI64_RS00435 PF00005 ABC transporter LI64_RS00445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS00445 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS00450 PF12706 Beta-lactamase superfamily domain LI64_RS00455 PF12833 Helix-turn-helix domain LI64_RS00460 PF02463 RecF/RecN/SMC N terminal domain LI64_RS00465 PF08349 Protein of unknown function (DUF1722) LI64_RS00470 PF00576 HIUase/Transthyretin family LI64_RS00475 PF13411 MerR HTH family regulatory protein LI64_RS00480 PF08212 Lipocalin-like domain LI64_RS00485 PF00419 Fimbrial protein LI64_RS00485 PF09222 Fimbrial adhesin F17-AG, lectin domain LI64_RS00495 PF00577 Outer membrane usher protein LI64_RS00495 PF13954 PapC N-terminal domain LI64_RS00495 PF13953 PapC C-terminal domain LI64_RS00500 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS00500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS00505 PF00419 Fimbrial protein LI64_RS00515 PF13737 Transposase DDE domain LI64_RS00525 PF03358 NADPH-dependent FMN reductase LI64_RS00535 PF06953 Arsenical resistance operon trans-acting repressor ArsD LI64_RS00540 PF02374 Anion-transporting ATPase LI64_RS00550 PF03960 ArsC family LI64_RS00555 PF02040 Arsenical pump membrane protein LI64_RS00560 PF02374 Anion-transporting ATPase LI64_RS00565 PF06953 Arsenical resistance operon trans-acting repressor ArsD LI64_RS00570 PF01022 Bacterial regulatory protein, arsR family LI64_RS00580 PF13361 UvrD-like helicase C-terminal domain LI64_RS00580 PF00580 UvrD/REP helicase N-terminal domain LI64_RS00585 PF00589 Phage integrase family LI64_RS00585 PF14659 Phage integrase, N-terminal SAM-like domain LI64_RS00585 PF13356 Arm DNA-binding domain LI64_RS00600 PF13802 Galactose mutarotase-like LI64_RS00600 PF01055 Glycosyl hydrolases family 31 LI64_RS00605 PF05170 AsmA family LI64_RS00615 PF03616 Sodium/glutamate symporter LI64_RS00620 PF00271 Helicase conserved C-terminal domain LI64_RS00620 PF17191 RecG wedge domain LI64_RS00620 PF00270 DEAD/DEAH box helicase LI64_RS00625 PF00588 SpoU rRNA Methylase family LI64_RS00625 PF12105 SpoU, rRNA methylase, C-terminal LI64_RS00630 PF02824 TGS domain LI64_RS00630 PF13291 ACT domain LI64_RS00630 PF04607 Region found in RelA / SpoT proteins LI64_RS00635 PF01192 RNA polymerase Rpb6 LI64_RS00640 PF00625 Guanylate kinase LI64_RS00645 PF03120 NAD-dependent DNA ligase OB-fold domain LI64_RS00645 PF01653 NAD-dependent DNA ligase adenylation domain LI64_RS00655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF LI64_RS00660 PF06251 Capsule biosynthesis GfcC LI64_RS00665 PF06082 Exopolysaccharide biosynthesis protein YbjH LI64_RS00670 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LI64_RS00670 PF02563 Polysaccharide biosynthesis/export protein LI64_RS00670 PF10531 SLBB domain LI64_RS00675 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI64_RS00680 PF13614 AAA domain LI64_RS00680 PF02706 Chain length determinant protein LI64_RS00680 PF13807 G-rich domain on putative tyrosine kinase LI64_RS00685 PF03458 UPF0126 domain LI64_RS00690 PF08340 Domain of unknown function (DUF1732) LI64_RS00690 PF03755 YicC-like family, N-terminal region LI64_RS00695 PF03725 3' exoribonuclease family, domain 2 LI64_RS00695 PF01138 3' exoribonuclease family, domain 1 LI64_RS00700 PF00156 Phosphoribosyl transferase domain LI64_RS00705 PF00440 Bacterial regulatory proteins, tetR family LI64_RS00710 PF00692 dUTPase LI64_RS00715 PF04127 DNA / pantothenate metabolism flavoprotein LI64_RS00715 PF02441 Flavoprotein LI64_RS00720 PF04002 RadC-like JAB domain LI64_RS00725 PF00830 Ribosomal L28 family LI64_RS00730 PF00471 Ribosomal protein L33 LI64_RS00735 PF06827 Zinc finger found in FPG and IleRS LI64_RS00735 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI64_RS00735 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI64_RS00740 PF01467 Cytidylyltransferase-like LI64_RS00745 PF00535 Glycosyl transferase family 2 LI64_RS00750 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LI64_RS00755 PF00535 Glycosyl transferase family 2 LI64_RS00760 PF00534 Glycosyl transferases group 1 LI64_RS00760 PF13439 Glycosyltransferase Family 4 LI64_RS00765 PF00534 Glycosyl transferases group 1 LI64_RS00765 PF13439 Glycosyltransferase Family 4 LI64_RS00770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI64_RS00785 PF00535 Glycosyl transferase family 2 LI64_RS00795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI64_RS00800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI64_RS00805 PF01370 NAD dependent epimerase/dehydratase family LI64_RS00810 PF00155 Aminotransferase class I and II LI64_RS00815 PF00107 Zinc-binding dehydrogenase LI64_RS00815 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS00830 PF04748 Divergent polysaccharide deacetylase LI64_RS00835 PF01551 Peptidase family M23 LI64_RS00840 PF01676 Metalloenzyme superfamily LI64_RS00840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LI64_RS00845 PF00581 Rhodanese-like domain LI64_RS00850 PF00462 Glutaredoxin LI64_RS00855 PF02556 Preprotein translocase subunit SecB LI64_RS00860 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LI64_RS00860 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LI64_RS00865 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS00865 PF06426 Serine acetyltransferase, N-terminal LI64_RS00875 PF13361 UvrD-like helicase C-terminal domain LI64_RS00875 PF00580 UvrD/REP helicase N-terminal domain LI64_RS00880 PF02541 Ppx/GppA phosphatase family LI64_RS00885 PF00271 Helicase conserved C-terminal domain LI64_RS00885 PF00270 DEAD/DEAH box helicase LI64_RS00890 PF00085 Thioredoxin LI64_RS00895 PF07498 Rho termination factor, N-terminal domain LI64_RS00895 PF07497 Rho termination factor, RNA-binding domain LI64_RS00895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI64_RS00900 PF00953 Glycosyl transferase family 4 LI64_RS00905 PF02706 Chain length determinant protein LI64_RS00910 PF02350 UDP-N-acetylglucosamine 2-epimerase LI64_RS00915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI64_RS00915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI64_RS00915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI64_RS00925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LI64_RS00930 PF01943 Polysaccharide biosynthesis protein LI64_RS00935 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LI64_RS00940 PF06899 WzyE protein, O-antigen assembly polymerase LI64_RS00945 PF03808 Glycosyl transferase WecB/TagA/CpsF family LI64_RS00950 PF00324 Amino acid permease LI64_RS00975 PF07719 Tetratricopeptide repeat LI64_RS00975 PF07219 HemY protein N-terminus LI64_RS00980 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LI64_RS00985 PF02602 Uroporphyrinogen-III synthase HemD LI64_RS00990 PF03900 Porphobilinogen deaminase, C-terminal domain LI64_RS00990 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LI64_RS00995 PF01295 Adenylate cyclase, class-I LI64_RS00995 PF12633 Adenylate cyclase NT domain LI64_RS01000 PF01491 Frataxin-like domain LI64_RS01005 PF13627 Prokaryotic lipoprotein-attachment site LI64_RS01010 PF01678 Diaminopimelate epimerase LI64_RS01015 PF04340 Protein of unknown function, DUF484 LI64_RS01020 PF00589 Phage integrase family LI64_RS01020 PF02899 Phage integrase, N-terminal SAM-like domain LI64_RS01025 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS01030 PF00580 UvrD/REP helicase N-terminal domain LI64_RS01030 PF13361 UvrD-like helicase C-terminal domain LI64_RS01035 PF01544 CorA-like Mg2+ transporter protein LI64_RS01040 PF00892 EamA-like transporter family LI64_RS01045 PF03061 Thioesterase superfamily LI64_RS01050 PF02253 Phospholipase A1 LI64_RS01055 PF00570 HRDC domain LI64_RS01055 PF09382 RQC domain LI64_RS01055 PF16124 RecQ zinc-binding LI64_RS01055 PF00270 DEAD/DEAH box helicase LI64_RS01055 PF00271 Helicase conserved C-terminal domain LI64_RS01060 PF01810 LysE type translocator LI64_RS01065 PF01810 LysE type translocator LI64_RS01070 PF12146 Serine aminopeptidase, S33 LI64_RS01080 PF00892 EamA-like transporter family LI64_RS01085 PF03466 LysR substrate binding domain LI64_RS01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS01090 PF01717 Cobalamin-independent synthase, Catalytic domain LI64_RS01090 PF08267 Cobalamin-independent synthase, N-terminal domain LI64_RS01095 PF03459 TOBE domain LI64_RS01095 PF17912 MalK OB fold domain LI64_RS01095 PF00005 ABC transporter LI64_RS01100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI64_RS01100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI64_RS01100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI64_RS01100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI64_RS01105 PF00356 Bacterial regulatory proteins, lacI family LI64_RS01115 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01125 PF00128 Alpha amylase, catalytic domain LI64_RS01135 PF01738 Dienelactone hydrolase family LI64_RS01140 PF01048 Phosphorylase superfamily LI64_RS01145 PF02646 RmuC family LI64_RS01150 PF01209 ubiE/COQ5 methyltransferase family LI64_RS01155 PF02036 SCP-2 sterol transfer family LI64_RS01160 PF03109 ABC1 family LI64_RS01165 PF02416 mttA/Hcf106 family LI64_RS01175 PF00902 Sec-independent protein translocase protein (TatC) LI64_RS01180 PF01026 TatD related DNase LI64_RS01185 PF02357 Transcription termination factor nusG LI64_RS01190 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI64_RS01195 PF00175 Oxidoreductase NAD-binding domain LI64_RS01195 PF00970 Oxidoreductase FAD-binding domain LI64_RS01200 PF12848 ABC transporter LI64_RS01200 PF00005 ABC transporter LI64_RS01205 PF01381 Helix-turn-helix LI64_RS01215 PF11254 Protein of unknown function (DUF3053) LI64_RS01220 PF00313 'Cold-shock' DNA-binding domain LI64_RS01225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI64_RS01225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS01230 PF07690 Major Facilitator Superfamily LI64_RS01235 PF00294 pfkB family carbohydrate kinase LI64_RS01245 PF00356 Bacterial regulatory proteins, lacI family LI64_RS01250 PF00691 OmpA family LI64_RS01250 PF13488 Glycine zipper LI64_RS01255 PF01568 Molydopterin dinucleotide binding domain LI64_RS01255 PF18364 Molybdopterin oxidoreductase N-terminal domain LI64_RS01255 PF00384 Molybdopterin oxidoreductase LI64_RS01260 PF00583 Acetyltransferase (GNAT) family LI64_RS01265 PF03352 Methyladenine glycosylase LI64_RS01270 PF03797 Autotransporter beta-domain LI64_RS01275 PF07690 Major Facilitator Superfamily LI64_RS01280 PF00419 Fimbrial protein LI64_RS01285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS01285 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS01290 PF13954 PapC N-terminal domain LI64_RS01290 PF13953 PapC C-terminal domain LI64_RS01290 PF00577 Outer membrane usher protein LI64_RS01295 PF00419 Fimbrial protein LI64_RS01300 PF00419 Fimbrial protein LI64_RS01305 PF08019 Phosphoethanolamine transferase EptA/EptB LI64_RS01305 PF00884 Sulfatase LI64_RS01315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01325 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS01330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS01330 PF00005 ABC transporter LI64_RS01335 PF00005 ABC transporter LI64_RS01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS01340 PF00485 Phosphoribulokinase / Uridine kinase family LI64_RS01365 PF03143 Elongation factor Tu C-terminal domain LI64_RS01365 PF03144 Elongation factor Tu domain 2 LI64_RS01365 PF00009 Elongation factor Tu GTP binding domain LI64_RS01375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LI64_RS01380 PF00467 KOW motif LI64_RS01380 PF02357 Transcription termination factor nusG LI64_RS01385 PF00298 Ribosomal protein L11, RNA binding domain LI64_RS01385 PF03946 Ribosomal protein L11, N-terminal domain LI64_RS01390 PF00687 Ribosomal protein L1p/L10e family LI64_RS01395 PF00466 Ribosomal protein L10 LI64_RS01400 PF16320 Ribosomal protein L7/L12 dimerisation domain LI64_RS01400 PF00542 Ribosomal protein L7/L12 C-terminal domain LI64_RS01405 PF10385 RNA polymerase beta subunit external 1 domain LI64_RS01405 PF04563 RNA polymerase beta subunit LI64_RS01405 PF04561 RNA polymerase Rpb2, domain 2 LI64_RS01405 PF00562 RNA polymerase Rpb2, domain 6 LI64_RS01405 PF04565 RNA polymerase Rpb2, domain 3 LI64_RS01405 PF04560 RNA polymerase Rpb2, domain 7 LI64_RS01410 PF04983 RNA polymerase Rpb1, domain 3 LI64_RS01410 PF04998 RNA polymerase Rpb1, domain 5 LI64_RS01410 PF05000 RNA polymerase Rpb1, domain 4 LI64_RS01410 PF00623 RNA polymerase Rpb1, domain 2 LI64_RS01410 PF04997 RNA polymerase Rpb1, domain 1 LI64_RS01415 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI64_RS01420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS01425 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS01430 PF04055 Radical SAM superfamily LI64_RS01430 PF06968 Biotin and Thiamin Synthesis associated domain LI64_RS01435 PF05690 Thiazole biosynthesis protein ThiG LI64_RS01440 PF02597 ThiS family LI64_RS01445 PF00899 ThiF family LI64_RS01450 PF02581 Thiamine monophosphate synthase LI64_RS01455 PF01964 Radical SAM ThiC family LI64_RS01455 PF13667 ThiC-associated domain LI64_RS01460 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LI64_RS01465 PF00293 NUDIX domain LI64_RS01465 PF09297 NADH pyrophosphatase zinc ribbon domain LI64_RS01470 PF01208 Uroporphyrinogen decarboxylase (URO-D) LI64_RS01475 PF04493 Endonuclease V LI64_RS01480 PF04222 Protein of unknown function (DUF416) LI64_RS01485 PF00216 Bacterial DNA-binding protein LI64_RS01490 PF07356 Protein of unknown function (DUF1481) LI64_RS01495 PF02843 Phosphoribosylglycinamide synthetase, C domain LI64_RS01495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LI64_RS01495 PF02844 Phosphoribosylglycinamide synthetase, N domain LI64_RS01500 PF01808 AICARFT/IMPCHase bienzyme LI64_RS01500 PF02142 MGS-like domain LI64_RS01520 PF04204 Homoserine O-succinyltransferase LI64_RS01525 PF01274 Malate synthase LI64_RS01530 PF00463 Isocitrate lyase family LI64_RS01535 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LI64_RS01540 PF09339 IclR helix-turn-helix domain LI64_RS01540 PF01614 Bacterial transcriptional regulator LI64_RS01545 PF00809 Pterin binding enzyme LI64_RS01545 PF02965 Vitamin B12 dependent methionine synthase, activation domain LI64_RS01545 PF02574 Homocysteine S-methyltransferase LI64_RS01545 PF02607 B12 binding domain LI64_RS01545 PF02310 B12 binding domain LI64_RS01550 PF02690 Na+/Pi-cotransporter LI64_RS01565 PF00849 RNA pseudouridylate synthase LI64_RS01565 PF01479 S4 domain LI64_RS01570 PF11656 YjbD family (DUF3811) LI64_RS01575 PF01758 Sodium Bile acid symporter family LI64_RS01580 PF01842 ACT domain LI64_RS01580 PF00696 Amino acid kinase family LI64_RS01585 PF00342 Phosphoglucose isomerase LI64_RS01590 PF11106 Exopolysaccharide production protein YjbE LI64_RS01595 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF LI64_RS01600 PF06251 Capsule biosynthesis GfcC LI64_RS01605 PF06082 Exopolysaccharide biosynthesis protein YbjH LI64_RS01610 PF06146 Phosphate-starvation-inducible E LI64_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01620 PF14785 Maltose transport system permease protein MalF P2 domain LI64_RS01620 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01625 PF01547 Bacterial extracellular solute-binding protein LI64_RS01630 PF00005 ABC transporter LI64_RS01630 PF17912 MalK OB fold domain LI64_RS01635 PF02264 LamB porin LI64_RS01640 PF07148 Maltose operon periplasmic protein precursor (MalM) LI64_RS01645 PF04345 Chorismate lyase LI64_RS01650 PF01040 UbiA prenyltransferase family LI64_RS01655 PF01553 Acyltransferase LI64_RS01660 PF01219 Prokaryotic diacylglycerol kinase LI64_RS01665 PF01726 LexA DNA binding domain LI64_RS01665 PF00717 Peptidase S24-like LI64_RS01670 PF01554 MatE LI64_RS01675 PF05532 CsbD-like LI64_RS01680 PF01475 Ferric uptake regulator family LI64_RS01700 PF01207 Dihydrouridine synthase (Dus) LI64_RS01705 PF09583 Phage shock protein G (Phageshock_PspG) LI64_RS01710 PF00107 Zinc-binding dehydrogenase LI64_RS01710 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS01715 PF03796 DnaB-like helicase C terminal domain LI64_RS01715 PF00772 DnaB-like helicase N terminal domain LI64_RS01720 PF01168 Alanine racemase, N-terminal domain LI64_RS01720 PF00842 Alanine racemase, C-terminal domain LI64_RS01725 PF00155 Aminotransferase class I and II LI64_RS01730 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LI64_RS01735 PF01894 Uncharacterised protein family UPF0047 LI64_RS01740 PF04237 YjbR LI64_RS01745 PF00005 ABC transporter LI64_RS01745 PF17760 UvrA interaction domain LI64_RS01745 PF17755 UvrA DNA-binding domain LI64_RS01750 PF00436 Single-strand binding protein family LI64_RS01755 PF15940 Family of unknown function LI64_RS01760 PF12792 CSS motif domain associated with EAL LI64_RS01760 PF00563 EAL domain LI64_RS01765 PF12833 Helix-turn-helix domain LI64_RS01770 PF09278 MerR, DNA binding LI64_RS01770 PF00376 MerR family regulatory protein LI64_RS01775 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS01775 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS01780 PF00860 Permease family LI64_RS01785 PF00999 Sodium/hydrogen exchanger family LI64_RS01790 PF03466 LysR substrate binding domain LI64_RS01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS01795 PF03788 LrgA family LI64_RS01800 PF04172 LrgB-like family LI64_RS01805 PF00474 Sodium:solute symporter family LI64_RS01810 PF04341 Protein of unknown function, DUF485 LI64_RS01815 PF16177 Acetyl-coenzyme A synthetase N-terminus LI64_RS01815 PF13193 AMP-binding enzyme C-terminal domain LI64_RS01815 PF00501 AMP-binding enzyme LI64_RS01820 PF00375 Sodium:dicarboxylate symporter family LI64_RS01825 PF08238 Sel1 repeat LI64_RS01830 PF01848 Hok/gef family LI64_RS01835 PF01568 Molydopterin dinucleotide binding domain LI64_RS01835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS01835 PF00384 Molybdopterin oxidoreductase LI64_RS01840 PF00384 Molybdopterin oxidoreductase LI64_RS01840 PF01568 Molydopterin dinucleotide binding domain LI64_RS01840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS01845 PF00072 Response regulator receiver domain LI64_RS01845 PF00486 Transcriptional regulatory protein, C terminal LI64_RS01855 PF01116 Fructose-bisphosphate aldolase class-II LI64_RS01865 PF13407 Periplasmic binding protein domain LI64_RS01870 PF02653 Branched-chain amino acid transport system / permease component LI64_RS01875 PF00005 ABC transporter LI64_RS01880 PF13426 PAS domain LI64_RS01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS01880 PF00072 Response regulator receiver domain LI64_RS01890 PF12706 Beta-lactamase superfamily domain LI64_RS01895 PF00583 Acetyltransferase (GNAT) family LI64_RS01905 PF07969 Amidohydrolase family LI64_RS01910 PF00005 ABC transporter LI64_RS01915 PF00005 ABC transporter LI64_RS01920 PF06007 Phosphonate metabolism protein PhnJ LI64_RS01925 PF05861 Bacterial phosphonate metabolism protein (PhnI) LI64_RS01930 PF05845 Bacterial phosphonate metabolism protein (PhnH) LI64_RS01935 PF06754 Phosphonate metabolism protein PhnG LI64_RS01940 PF00392 Bacterial regulatory proteins, gntR family LI64_RS01940 PF07702 UTRA domain LI64_RS01945 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS01955 PF00005 ABC transporter LI64_RS01960 PF06983 3-demethylubiquinone-9 3-methyltransferase LI64_RS01965 PF08274 PhnA Zinc-Ribbon LI64_RS01965 PF03831 PhnA domain LI64_RS01970 PF00350 Dynamin family LI64_RS01975 PF13990 YjcZ-like protein LI64_RS01980 PF03812 2-keto-3-deoxygluconate permease LI64_RS01985 PF08946 Osmosensory transporter coiled coil LI64_RS01985 PF00083 Sugar (and other) transporter LI64_RS01990 PF03824 High-affinity nickel-transport protein LI64_RS02015 PF09997 Predicted membrane protein (DUF2238) LI64_RS02040 PF02683 Cytochrome C biogenesis protein transmembrane region LI64_RS02040 PF11412 Disulphide bond corrector protein DsbC LI64_RS02045 PF03091 CutA1 divalent ion tolerance protein LI64_RS02050 PF03605 Anaerobic c4-dicarboxylate membrane transporter LI64_RS02055 PF00206 Lyase LI64_RS02055 PF10415 Fumarase C C-terminus LI64_RS02060 PF04186 FxsA cytoplasmic membrane protein LI64_RS02065 PF13520 Amino acid permease LI64_RS02070 PF00166 Chaperonin 10 Kd subunit LI64_RS02075 PF00118 TCP-1/cpn60 chaperonin family LI64_RS02080 PF01979 Amidohydrolase family LI64_RS02085 PF07670 Nucleoside recognition LI64_RS02090 PF07670 Nucleoside recognition LI64_RS02095 PF13698 Domain of unknown function (DUF4156) LI64_RS02100 PF04055 Radical SAM superfamily LI64_RS02105 PF09285 Elongation factor P, C-terminal LI64_RS02105 PF08207 Elongation factor P (EF-P) KOW-like domain LI64_RS02105 PF01132 Elongation factor P (EF-P) OB domain LI64_RS02110 PF08085 Entericidin EcnA/B family LI64_RS02115 PF08085 Entericidin EcnA/B family LI64_RS02120 PF00196 Bacterial regulatory proteins, luxR family LI64_RS02125 PF00893 Small Multidrug Resistance protein LI64_RS02130 PF08212 Lipocalin-like domain LI64_RS02135 PF00144 Beta-lactamase LI64_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS02140 PF03466 LysR substrate binding domain LI64_RS02145 PF02313 Fumarate reductase subunit D LI64_RS02150 PF02300 Fumarate reductase subunit C LI64_RS02155 PF13183 4Fe-4S dicluster domain LI64_RS02155 PF13085 2Fe-2S iron-sulfur cluster binding domain LI64_RS02160 PF00890 FAD binding domain LI64_RS02160 PF02910 Fumarate reductase flavoprotein C-term LI64_RS02165 PF00152 tRNA synthetases class II (D, K and N) LI64_RS02170 PF13520 Amino acid permease LI64_RS02175 PF00924 Mechanosensitive ion channel LI64_RS02175 PF12795 Mechanosensitive ion channel porin domain LI64_RS02175 PF12794 Mechanosensitive ion channel inner membrane domain 1 LI64_RS02180 PF02666 Phosphatidylserine decarboxylase LI64_RS02185 PF03193 RsgA GTPase LI64_RS02190 PF00929 Exonuclease LI64_RS02210 PF08331 Domain of unknown function (DUF1730) LI64_RS02215 PF03853 YjeF-related protein N-terminus LI64_RS02215 PF01256 Carbohydrate kinase LI64_RS02220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LI64_RS02225 PF01520 N-acetylmuramoyl-L-alanine amidase LI64_RS02230 PF01119 DNA mismatch repair protein, C-terminal domain LI64_RS02230 PF08676 MutL C terminal dimerisation domain LI64_RS02240 PF17209 Hfq protein LI64_RS02245 PF01926 50S ribosome-binding GTPase LI64_RS02245 PF13167 GTP-binding GTPase N-terminal LI64_RS02245 PF16360 GTP-binding GTPase Middle Region LI64_RS02250 PF12221 Bacterial membrane protein N terminal LI64_RS02250 PF01145 SPFH domain / Band 7 family LI64_RS02255 PF01145 SPFH domain / Band 7 family LI64_RS02260 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LI64_RS02265 PF00709 Adenylosuccinate synthetase LI64_RS02270 PF02082 Transcriptional regulator LI64_RS02275 PF00773 RNB domain LI64_RS02275 PF17876 Cold shock domain LI64_RS02275 PF08461 Ribonuclease R winged-helix domain LI64_RS02275 PF08206 Ribonuclease B OB domain LI64_RS02275 PF00575 S1 RNA binding domain LI64_RS02280 PF08032 RNA 2'-O ribose methyltransferase substrate binding LI64_RS02280 PF00588 SpoU rRNA Methylase family LI64_RS02285 PF00083 Sugar (and other) transporter LI64_RS02285 PF08946 Osmosensory transporter coiled coil LI64_RS02290 PF18158 Adaptive response protein AidB N-terminal domain LI64_RS02290 PF02770 Acyl-CoA dehydrogenase, middle domain LI64_RS02290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI64_RS02295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS02295 PF02203 Tar ligand binding domain homologue LI64_RS02295 PF00672 HAMP domain LI64_RS02300 PF07338 Protein of unknown function (DUF1471) LI64_RS02305 PF07338 Protein of unknown function (DUF1471) LI64_RS02310 PF00326 Prolyl oligopeptidase family LI64_RS02315 PF00455 DeoR C terminal sensor domain LI64_RS02315 PF08220 DeoR-like helix-turn-helix domain LI64_RS02325 PF03611 PTS system sugar-specific permease component LI64_RS02330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS02335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS02340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI64_RS02345 PF01261 Xylose isomerase-like TIM barrel LI64_RS02350 PF00596 Class II Aldolase and Adducin N-terminal domain LI64_RS02355 PF07338 Protein of unknown function (DUF1471) LI64_RS02360 PF01250 Ribosomal protein S6 LI64_RS02365 PF00436 Single-strand binding protein family LI64_RS02370 PF01084 Ribosomal protein S18 LI64_RS02375 PF01281 Ribosomal protein L9, N-terminal domain LI64_RS02375 PF03948 Ribosomal protein L9, C-terminal domain LI64_RS02380 PF00892 EamA-like transporter family LI64_RS02385 PF04225 Opacity-associated protein A LysM-like domain LI64_RS02385 PF08525 Opacity-associated protein A N-terminal motif LI64_RS02390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LI64_RS02390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI64_RS02395 PF00324 Amino acid permease LI64_RS02400 PF04405 Domain of Unknown function (DUF542) LI64_RS02400 PF01814 Hemerythrin HHE cation binding domain LI64_RS02405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS02405 PF02203 Tar ligand binding domain homologue LI64_RS02405 PF00672 HAMP domain LI64_RS02410 PF00892 EamA-like transporter family LI64_RS02420 PF05368 NmrA-like family LI64_RS02425 PF01638 HxlR-like helix-turn-helix LI64_RS02430 PF02872 5'-nucleotidase, C-terminal domain LI64_RS02430 PF00149 Calcineurin-like phosphoesterase LI64_RS02435 PF00459 Inositol monophosphatase family LI64_RS02440 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LI64_RS02445 PF06526 Protein of unknown function (DUF1107) LI64_RS02450 PF03471 Transporter associated domain LI64_RS02450 PF00571 CBS domain LI64_RS02450 PF01595 Cyclin M transmembrane N-terminal domain LI64_RS02460 PF13737 Transposase DDE domain LI64_RS02465 PF00356 Bacterial regulatory proteins, lacI family LI64_RS02470 PF01625 Peptide methionine sulfoxide reductase LI64_RS02475 PF17243 POTRA domain TamA domain 1 LI64_RS02475 PF07244 Surface antigen variable number repeat LI64_RS02475 PF01103 Surface antigen LI64_RS02480 PF04357 TamB, inner membrane protein subunit of TAM complex LI64_RS02485 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LI64_RS02490 PF00719 Inorganic pyrophosphatase LI64_RS02495 PF13407 Periplasmic binding protein domain LI64_RS02500 PF00005 ABC transporter LI64_RS02505 PF02653 Branched-chain amino acid transport system / permease component LI64_RS02510 PF02653 Branched-chain amino acid transport system / permease component LI64_RS02515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS02515 PF02203 Tar ligand binding domain homologue LI64_RS02515 PF00672 HAMP domain LI64_RS02520 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LI64_RS02525 PF02875 Mur ligase family, glutamate ligase domain LI64_RS02525 PF08245 Mur ligase middle domain LI64_RS02525 PF01225 Mur ligase family, catalytic domain LI64_RS02530 PF04751 Protein of unknown function (DUF615) LI64_RS02535 PF01523 Putative modulator of DNA gyrase LI64_RS02540 PF07361 Cytochrome b562 LI64_RS02570 PF01979 Amidohydrolase family LI64_RS02575 PF03841 L-seryl-tRNA selenium transferase LI64_RS02580 PF07071 KDGP aldolase LI64_RS02590 PF08279 HTH domain LI64_RS02590 PF05043 Mga helix-turn-helix domain LI64_RS02590 PF00874 PRD domain LI64_RS02590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS02600 PF13597 Anaerobic ribonucleoside-triphosphate reductase LI64_RS02600 PF03477 ATP cone domain LI64_RS02605 PF02378 Phosphotransferase system, EIIC LI64_RS02605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS02605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS02615 PF02378 Phosphotransferase system, EIIC LI64_RS02620 PF01418 Helix-turn-helix domain, rpiR family LI64_RS02620 PF01380 SIS domain LI64_RS02630 PF11941 Domain of unknown function (DUF3459) LI64_RS02630 PF00128 Alpha amylase, catalytic domain LI64_RS02635 PF00367 phosphotransferase system, EIIB LI64_RS02635 PF02378 Phosphotransferase system, EIIC LI64_RS02655 PF00356 Bacterial regulatory proteins, lacI family LI64_RS02660 PF00690 Cation transporter/ATPase, N-terminus LI64_RS02660 PF00689 Cation transporting ATPase, C-terminus LI64_RS02665 PF00728 Glycosyl hydrolase family 20, catalytic domain LI64_RS02665 PF02838 Glycosyl hydrolase family 20, domain 2 LI64_RS02665 PF07691 PA14 domain LI64_RS02670 PF18416 N-acetylglucosamine binding protein domain 2 LI64_RS02670 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LI64_RS02675 PF01042 Endoribonuclease L-PSP LI64_RS02680 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LI64_RS02680 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LI64_RS02685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI64_RS02685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI64_RS02690 PF02863 Arginine repressor, C-terminal domain LI64_RS02690 PF01316 Arginine repressor, DNA binding domain LI64_RS02695 PF03606 C4-dicarboxylate anaerobic carrier LI64_RS02700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI64_RS02700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI64_RS02705 PF00696 Amino acid kinase family LI64_RS02715 PF04074 YhcH/YjgK/YiaL LI64_RS02720 PF00701 Dihydrodipicolinate synthetase family LI64_RS02725 PF00920 Dehydratase family LI64_RS02735 PF04616 Glycosyl hydrolases family 43 LI64_RS02735 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LI64_RS02740 PF01614 Bacterial transcriptional regulator LI64_RS02740 PF09339 IclR helix-turn-helix domain LI64_RS02745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI64_RS02745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI64_RS02750 PF06877 Regulator of ribonuclease activity B LI64_RS02755 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LI64_RS02770 PF00589 Phage integrase family LI64_RS02770 PF13356 Arm DNA-binding domain LI64_RS02825 PF18255 DNA processing protein A sterile alpha motif domain LI64_RS02825 PF02481 DNA recombination-mediator protein A LI64_RS02835 PF13737 Transposase DDE domain LI64_RS02840 PF00857 Isochorismatase family LI64_RS02855 PF00072 Response regulator receiver domain LI64_RS02855 PF00158 Sigma-54 interaction domain LI64_RS02855 PF02954 Bacterial regulatory protein, Fis family LI64_RS02860 PF13426 PAS domain LI64_RS02860 PF08447 PAS fold LI64_RS02860 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS02860 PF13493 Domain of unknown function (DUF4118) LI64_RS02860 PF00989 PAS fold LI64_RS02865 PF00072 Response regulator receiver domain LI64_RS02865 PF00196 Bacterial regulatory proteins, luxR family LI64_RS02870 PF00574 Clp protease LI64_RS02875 PF08007 Cupin superfamily protein LI64_RS02890 PF00392 Bacterial regulatory proteins, gntR family LI64_RS02890 PF00155 Aminotransferase class I and II LI64_RS02895 PF06568 Domain of unknown function (DUF1127) LI64_RS02900 PF00155 Aminotransferase class I and II LI64_RS02900 PF00392 Bacterial regulatory proteins, gntR family LI64_RS02905 PF02627 Carboxymuconolactone decarboxylase family LI64_RS02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS02910 PF03466 LysR substrate binding domain LI64_RS02915 PF00171 Aldehyde dehydrogenase family LI64_RS02940 PF13533 Biotin-lipoyl like LI64_RS02950 PF04286 Protein of unknown function (DUF445) LI64_RS02955 PF00171 Aldehyde dehydrogenase family LI64_RS02975 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI64_RS02975 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI64_RS02980 PF04328 Selenoprotein, putative LI64_RS02985 PF02554 Carbon starvation protein CstA LI64_RS02985 PF13722 5TM C-terminal transporter carbon starvation CstA LI64_RS02990 PF01613 Flavin reductase like domain LI64_RS02995 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LI64_RS02995 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LI64_RS03005 PF07690 Major Facilitator Superfamily LI64_RS03010 PF03328 HpcH/HpaI aldolase/citrate lyase family LI64_RS03015 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI64_RS03020 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LI64_RS03025 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI64_RS03030 PF00171 Aldehyde dehydrogenase family LI64_RS03035 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI64_RS03040 PF01047 MarR family LI64_RS03045 PF02203 Tar ligand binding domain homologue LI64_RS03045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS03045 PF00672 HAMP domain LI64_RS03050 PF00583 Acetyltransferase (GNAT) family LI64_RS03090 PF00884 Sulfatase LI64_RS03095 PF10696 Protein of unknown function (DUF2501) LI64_RS03100 PF01695 IstB-like ATP binding protein LI64_RS03105 PF17948 DnaT DNA-binding domain LI64_RS03110 PF02566 OsmC-like protein LI64_RS03115 PF01047 MarR family LI64_RS03120 PF12821 Threonine/Serine exporter, ThrE LI64_RS03125 PF06738 Putative threonine/serine exporter LI64_RS03130 PF00196 Bacterial regulatory proteins, luxR family LI64_RS03135 PF13737 Transposase DDE domain LI64_RS03140 PF00196 Bacterial regulatory proteins, luxR family LI64_RS03145 PF00196 Bacterial regulatory proteins, luxR family LI64_RS03150 PF04073 Aminoacyl-tRNA editing domain LI64_RS03155 PF02378 Phosphotransferase system, EIIC LI64_RS03160 PF06276 Ferric iron reductase FhuF-like transporter LI64_RS03160 PF11575 FhuF 2Fe-2S C-terminal domain LI64_RS03165 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS03170 PF07256 Protein of unknown function (DUF1435) LI64_RS03190 PF08468 Methyltransferase small domain N-terminal LI64_RS03190 PF05175 Methyltransferase small domain LI64_RS03195 PF03603 DNA polymerase III psi subunit LI64_RS03200 PF00583 Acetyltransferase (GNAT) family LI64_RS03205 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS03210 PF16658 Class II release factor RF3, C-terminal domain LI64_RS03210 PF03144 Elongation factor Tu domain 2 LI64_RS03210 PF00009 Elongation factor Tu GTP binding domain LI64_RS03215 PF04972 BON domain LI64_RS03220 PF07043 Protein of unknown function (DUF1328) LI64_RS03225 PF01734 Patatin-like phospholipase LI64_RS03230 PF01026 TatD related DNase LI64_RS03235 PF04055 Radical SAM superfamily LI64_RS03240 PF11230 Protein of unknown function (DUF3029) LI64_RS03245 PF01791 DeoC/LacD family aldolase LI64_RS03250 PF00591 Glycosyl transferase family, a/b domain LI64_RS03250 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LI64_RS03250 PF02885 Glycosyl transferase family, helical bundle domain LI64_RS03255 PF01676 Metalloenzyme superfamily LI64_RS03260 PF01048 Phosphorylase superfamily LI64_RS03270 PF10437 Bacterial lipoate protein ligase C-terminus LI64_RS03270 PF03099 Biotin/lipoate A/B protein ligase family LI64_RS03275 PF10144 Bacterial virulence factor haemolysin LI64_RS03280 PF18429 Domain of unknown function (DUF5609) LI64_RS03285 PF18073 Rubredoxin metal binding domain LI64_RS03290 PF01381 Helix-turn-helix LI64_RS03290 PF13521 AAA domain LI64_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS03295 PF00107 Zinc-binding dehydrogenase LI64_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS03300 PF03466 LysR substrate binding domain LI64_RS03305 PF00005 ABC transporter LI64_RS03305 PF12848 ABC transporter LI64_RS03310 PF01464 Transglycosylase SLT domain LI64_RS03310 PF14718 Soluble lytic murein transglycosylase L domain LI64_RS03315 PF01371 Trp repressor protein LI64_RS03320 PF01931 Protein of unknown function DUF84 LI64_RS03325 PF00300 Histidine phosphatase superfamily (branch 1) LI64_RS03330 PF12833 Helix-turn-helix domain LI64_RS03330 PF06445 GyrI-like small molecule binding domain LI64_RS03335 PF05981 CreA protein LI64_RS03340 PF00072 Response regulator receiver domain LI64_RS03340 PF00486 Transcriptional regulatory protein, C terminal LI64_RS03345 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS03345 PF00672 HAMP domain LI64_RS03350 PF06123 Inner membrane protein CreD LI64_RS03355 PF00486 Transcriptional regulatory protein, C terminal LI64_RS03355 PF00072 Response regulator receiver domain LI64_RS03360 PF00588 SpoU rRNA Methylase family LI64_RS03365 PF13840 ACT domain LI64_RS03365 PF01842 ACT domain LI64_RS03365 PF00742 Homoserine dehydrogenase LI64_RS03365 PF03447 Homoserine dehydrogenase, NAD binding domain LI64_RS03365 PF00696 Amino acid kinase family LI64_RS03370 PF08544 GHMP kinases C terminal LI64_RS03370 PF00288 GHMP kinases N terminal domain LI64_RS03375 PF14821 Threonine synthase N terminus LI64_RS03375 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS03380 PF10697 Protein of unknown function (DUF2502) LI64_RS03385 PF03883 Peroxide stress protein YaaA LI64_RS03390 PF01235 Sodium:alanine symporter family LI64_RS03395 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI64_RS03400 PF00994 Probable molybdopterin binding domain LI64_RS03405 PF07690 Major Facilitator Superfamily LI64_RS03410 PF01184 GPR1/FUN34/yaaH family LI64_RS03420 PF00012 Hsp70 protein LI64_RS03425 PF01556 DnaJ C terminal domain LI64_RS03425 PF00684 DnaJ central domain LI64_RS03425 PF00226 DnaJ domain LI64_RS03430 PF06965 Na+/H+ antiporter 1 LI64_RS03435 PF03466 LysR substrate binding domain LI64_RS03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS03440 PF01649 Ribosomal protein S20 LI64_RS03445 PF01687 Riboflavin kinase LI64_RS03445 PF06574 FAD synthetase LI64_RS03450 PF06827 Zinc finger found in FPG and IleRS LI64_RS03450 PF00133 tRNA synthetases class I (I, L, M and V) LI64_RS03450 PF08264 Anticodon-binding domain of tRNA LI64_RS03455 PF01252 Signal peptidase (SPase) II LI64_RS03460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI64_RS03465 PF02401 LytB protein LI64_RS03470 PF06560 Glucose-6-phosphate isomerase (GPI) LI64_RS03480 PF03613 PTS system mannose/fructose/sorbose family IID component LI64_RS03485 PF03609 PTS system sorbose-specific iic component LI64_RS03490 PF03830 PTS system sorbose subfamily IIB component LI64_RS03505 PF00356 Bacterial regulatory proteins, lacI family LI64_RS03505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS03510 PF05173 Dihydrodipicolinate reductase, C-terminus LI64_RS03510 PF01113 Dihydrodipicolinate reductase, N-terminus LI64_RS03515 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LI64_RS03515 PF00117 Glutamine amidotransferase class-I LI64_RS03520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LI64_RS03520 PF02142 MGS-like domain LI64_RS03520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI64_RS03525 PF06004 Bacterial protein of unknown function (DUF903) LI64_RS03530 PF12951 Passenger-associated-transport-repeat LI64_RS03530 PF03797 Autotransporter beta-domain LI64_RS03535 PF02525 Flavodoxin-like fold LI64_RS03540 PF00999 Sodium/hydrogen exchanger family LI64_RS03540 PF02254 TrkA-N domain LI64_RS03545 PF00186 Dihydrofolate reductase LI64_RS03550 PF00149 Calcineurin-like phosphoesterase LI64_RS03555 PF04379 ApaG domain LI64_RS03560 PF00398 Ribosomal RNA adenine dimethylase LI64_RS03565 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LI64_RS03570 PF09312 SurA N-terminal domain LI64_RS03570 PF00639 PPIC-type PPIASE domain LI64_RS03575 PF04453 LPS transport system D LI64_RS03575 PF03968 OstA-like protein LI64_RS03580 PF05099 Tellurite resistance protein TerB LI64_RS03580 PF00226 DnaJ domain LI64_RS03585 PF00849 RNA pseudouridylate synthase LI64_RS03590 PF18339 RapA N-terminal Tudor like domain 1 LI64_RS03590 PF00176 SNF2 family N-terminal domain LI64_RS03590 PF12137 RNA polymerase recycling family C-terminal LI64_RS03590 PF18337 RapA N-terminal Tudor like domain LI64_RS03590 PF00271 Helicase conserved C-terminal domain LI64_RS03595 PF00136 DNA polymerase family B LI64_RS03595 PF03104 DNA polymerase family B, exonuclease domain LI64_RS03600 PF00596 Class II Aldolase and Adducin N-terminal domain LI64_RS03605 PF11762 L-arabinose isomerase C-terminal domain LI64_RS03605 PF02610 L-arabinose isomerase LI64_RS03610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS03615 PF12833 Helix-turn-helix domain LI64_RS03615 PF02311 AraC-like ligand binding domain LI64_RS03620 PF09335 SNARE associated Golgi protein LI64_RS03625 PF00005 ABC transporter LI64_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS03640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS03640 PF12793 Sugar transport-related sRNA regulator N-term LI64_RS03650 PF07690 Major Facilitator Superfamily LI64_RS03655 PF01848 Hok/gef family LI64_RS03660 PF00694 Aconitase C-terminal domain LI64_RS03665 PF00330 Aconitase family (aconitate hydratase) LI64_RS03670 PF00180 Isocitrate/isopropylmalate dehydrogenase LI64_RS03675 PF00682 HMGL-like LI64_RS03675 PF08502 LeuA allosteric (dimerisation) domain LI64_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS03680 PF03466 LysR substrate binding domain LI64_RS03685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS03685 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS03685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS03690 PF10369 Small subunit of acetolactate synthase LI64_RS03695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS03695 PF00356 Bacterial regulatory proteins, lacI family LI64_RS03700 PF02381 MraZ protein, putative antitoxin-like LI64_RS03705 PF01795 MraW methylase family LI64_RS03710 PF04999 Cell division protein FtsL LI64_RS03715 PF00905 Penicillin binding protein transpeptidase domain LI64_RS03715 PF03717 Penicillin-binding Protein dimerisation domain LI64_RS03720 PF01225 Mur ligase family, catalytic domain LI64_RS03720 PF02875 Mur ligase family, glutamate ligase domain LI64_RS03720 PF08245 Mur ligase middle domain LI64_RS03725 PF01225 Mur ligase family, catalytic domain LI64_RS03725 PF02875 Mur ligase family, glutamate ligase domain LI64_RS03725 PF08245 Mur ligase middle domain LI64_RS03730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LI64_RS03730 PF00953 Glycosyl transferase family 4 LI64_RS03735 PF02875 Mur ligase family, glutamate ligase domain LI64_RS03735 PF08245 Mur ligase middle domain LI64_RS03740 PF01098 Cell cycle protein LI64_RS03745 PF03033 Glycosyltransferase family 28 N-terminal domain LI64_RS03745 PF04101 Glycosyltransferase family 28 C-terminal domain LI64_RS03750 PF08245 Mur ligase middle domain LI64_RS03750 PF01225 Mur ligase family, catalytic domain LI64_RS03750 PF02875 Mur ligase family, glutamate ligase domain LI64_RS03755 PF01820 D-ala D-ala ligase N-terminus LI64_RS03755 PF07478 D-ala D-ala ligase C-terminus LI64_RS03760 PF08478 POTRA domain, FtsQ-type LI64_RS03760 PF03799 Cell division protein FtsQ LI64_RS03765 PF02491 SHS2 domain inserted in FTSA LI64_RS03770 PF12327 FtsZ family, C-terminal domain LI64_RS03770 PF00091 Tubulin/FtsZ family, GTPase domain LI64_RS03775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LI64_RS03780 PF06558 Secretion monitor precursor protein (SecM) LI64_RS03785 PF07517 SecA DEAD-like domain LI64_RS03785 PF02810 SEC-C motif LI64_RS03785 PF07516 SecA Wing and Scaffold domain LI64_RS03785 PF01043 SecA preprotein cross-linking domain LI64_RS03790 PF00293 NUDIX domain LI64_RS03795 PF03884 DNA gyrase inhibitor YacG LI64_RS03800 PF07072 Cell division protein LI64_RS03805 PF01121 Dephospho-CoA kinase LI64_RS03810 PF00478 IMP dehydrogenase / GMP reductase domain LI64_RS03815 PF00482 Type II secretion system (T2SS), protein F LI64_RS03820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LI64_RS03820 PF00437 Type II/IV secretion system protein LI64_RS03825 PF07963 Prokaryotic N-terminal methylation motif LI64_RS03830 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LI64_RS03830 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LI64_RS03835 PF01510 N-acetylmuramoyl-L-alanine amidase LI64_RS03840 PF17113 Regulatory signalling modulator protein AmpE LI64_RS03845 PF04616 Glycosyl hydrolases family 43 LI64_RS03845 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LI64_RS03855 PF00324 Amino acid permease LI64_RS03865 PF07729 FCD domain LI64_RS03865 PF00392 Bacterial regulatory proteins, gntR family LI64_RS03870 PF00456 Transketolase, thiamine diphosphate binding domain LI64_RS03870 PF17831 Pyruvate dehydrogenase E1 component middle domain LI64_RS03875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI64_RS03875 PF00364 Biotin-requiring enzyme LI64_RS03875 PF02817 e3 binding domain LI64_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI64_RS03895 PF11737 Protein of unknown function (DUF3300) LI64_RS03900 PF06434 Aconitate hydratase 2 N-terminus LI64_RS03900 PF11791 Aconitate B N-terminal domain LI64_RS03900 PF00330 Aconitase family (aconitate hydratase) LI64_RS03905 PF06062 Uncharacterised protein family (UPF0231) LI64_RS03910 PF02675 S-adenosylmethionine decarboxylase LI64_RS03915 PF17284 Spermidine synthase tetramerisation domain LI64_RS03920 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LI64_RS03925 PF07731 Multicopper oxidase LI64_RS03925 PF00394 Multicopper oxidase LI64_RS03925 PF07732 Multicopper oxidase LI64_RS03930 PF01011 PQQ enzyme repeat LI64_RS04030 PF03354 Phage Terminase LI64_RS04040 PF00156 Phosphoribosyl transferase domain LI64_RS04045 PF00484 Carbonic anhydrase LI64_RS04050 PF00005 ABC transporter LI64_RS04055 PF01061 ABC-2 type transporter LI64_RS04060 PF03610 PTS system fructose IIA component LI64_RS04065 PF01522 Polysaccharide deacetylase LI64_RS04090 PF00577 Outer membrane usher protein LI64_RS04090 PF13954 PapC N-terminal domain LI64_RS04090 PF13953 PapC C-terminal domain LI64_RS04095 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS04095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS04105 PF02261 Aspartate decarboxylase LI64_RS04110 PF02569 Pantoate-beta-alanine ligase LI64_RS04115 PF02548 Ketopantoate hydroxymethyltransferase LI64_RS04120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LI64_RS04125 PF12627 Probable RNA and SrmB- binding site of polymerase A LI64_RS04125 PF01743 Poly A polymerase head domain LI64_RS04125 PF12626 Polymerase A arginine-rich C-terminus LI64_RS04130 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI64_RS04135 PF01258 Prokaryotic dksA/traR C4-type zinc finger LI64_RS04140 PF17746 SfsA N-terminal OB domain LI64_RS04140 PF03749 Sugar fermentation stimulation protein RE domain LI64_RS04145 PF02834 LigT like Phosphoesterase LI64_RS04150 PF08482 ATP-dependent helicase C-terminal LI64_RS04150 PF00271 Helicase conserved C-terminal domain LI64_RS04150 PF04408 Helicase associated domain (HA2) LI64_RS04150 PF00270 DEAD/DEAH box helicase LI64_RS04155 PF14814 Bifunctional transglycosylase second domain LI64_RS04155 PF00905 Penicillin binding protein transpeptidase domain LI64_RS04155 PF00912 Transglycosylase LI64_RS04155 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LI64_RS04160 PF00593 TonB dependent receptor LI64_RS04160 PF07715 TonB-dependent Receptor Plug Domain LI64_RS04165 PF00005 ABC transporter LI64_RS04170 PF01497 Periplasmic binding protein LI64_RS04175 PF01032 FecCD transport family LI64_RS04180 PF00202 Aminotransferase class-III LI64_RS04185 PF00654 Voltage gated chloride channel LI64_RS04190 PF01521 Iron-sulphur cluster biosynthesis LI64_RS04195 PF03458 UPF0126 domain LI64_RS04200 PF01497 Periplasmic binding protein LI64_RS04205 PF01048 Phosphorylase superfamily LI64_RS04210 PF13286 Phosphohydrolase-associated domain LI64_RS04210 PF01966 HD domain LI64_RS04215 PF00595 PDZ domain LI64_RS04220 PF13556 PucR C-terminal helix-turn-helix domain LI64_RS04220 PF17853 GGDEF-like domain LI64_RS04220 PF05651 Putative sugar diacid recognition LI64_RS04225 PF11944 Protein of unknown function (DUF3461) LI64_RS04230 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LI64_RS04230 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS04230 PF14602 Hexapeptide repeat of succinyl-transferase LI64_RS04235 PF01842 ACT domain LI64_RS04235 PF01966 HD domain LI64_RS04235 PF08335 GlnD PII-uridylyltransferase LI64_RS04235 PF01909 Nucleotidyltransferase domain LI64_RS04240 PF00557 Metallopeptidase family M24 LI64_RS04245 PF00318 Ribosomal protein S2 LI64_RS04250 PF00889 Elongation factor TS LI64_RS04255 PF00696 Amino acid kinase family LI64_RS04260 PF01765 Ribosome recycling factor LI64_RS04265 PF13288 DXP reductoisomerase C-terminal domain LI64_RS04265 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LI64_RS04265 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LI64_RS04270 PF01255 Putative undecaprenyl diphosphate synthase LI64_RS04280 PF17820 PDZ domain LI64_RS04280 PF02163 Peptidase family M50 LI64_RS04285 PF07244 Surface antigen variable number repeat LI64_RS04285 PF01103 Surface antigen LI64_RS04290 PF03938 Outer membrane protein (OmpH-like) LI64_RS04295 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LI64_RS04295 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS04300 PF07977 FabA-like domain LI64_RS04305 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LI64_RS04305 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS04310 PF02684 Lipid-A-disaccharide synthetase LI64_RS04315 PF01351 Ribonuclease HII LI64_RS04320 PF07733 Bacterial DNA polymerase III alpha NTPase domain LI64_RS04320 PF14579 Helix-hairpin-helix motif LI64_RS04320 PF02811 PHP domain LI64_RS04320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LI64_RS04320 PF01336 OB-fold nucleic acid binding domain LI64_RS04325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LI64_RS04330 PF01276 Orn/Lys/Arg decarboxylase, major domain LI64_RS04330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI64_RS04330 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI64_RS04335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI64_RS04340 PF01171 PP-loop family LI64_RS04340 PF09179 TilS substrate binding domain LI64_RS04340 PF11734 TilS substrate C-terminal domain LI64_RS04345 PF07073 Modulator of Rho-dependent transcription termination (ROF) LI64_RS04350 PF06786 Uncharacterised protein family (UPF0253) LI64_RS04355 PF07152 YaeQ protein LI64_RS04360 PF00472 RF-1 domain LI64_RS04365 PF04170 NlpE N-terminal domain LI64_RS04365 PF17185 NlpE C-terminal OB domain LI64_RS04370 PF03129 Anticodon binding domain LI64_RS04370 PF04073 Aminoacyl-tRNA editing domain LI64_RS04370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI64_RS04375 PF01980 tRNA-methyltransferase O LI64_RS04375 PF18389 TrmO C-terminal domain LI64_RS04380 PF16358 RcsF lipoprotein LI64_RS04385 PF03180 NLPA lipoprotein LI64_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS04395 PF09383 NIL domain LI64_RS04395 PF00005 ABC transporter LI64_RS04435 PF00248 Aldo/keto reductase family LI64_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS04440 PF03466 LysR substrate binding domain LI64_RS04445 PF07690 Major Facilitator Superfamily LI64_RS04450 PF03372 Endonuclease/Exonuclease/phosphatase family LI64_RS04455 PF08241 Methyltransferase domain LI64_RS04460 PF01464 Transglycosylase SLT domain LI64_RS04460 PF01476 LysM domain LI64_RS04465 PF16123 Hydroxyacylglutathione hydrolase C-terminus LI64_RS04465 PF00753 Metallo-beta-lactamase superfamily LI64_RS04470 PF08241 Methyltransferase domain LI64_RS04475 PF00075 RNase H LI64_RS04480 PF00929 Exonuclease LI64_RS04490 PF00795 Carbon-nitrogen hydrolase LI64_RS04495 PF09317 Domain of unknown function (DUF1974) LI64_RS04495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI64_RS04495 PF02770 Acyl-CoA dehydrogenase, middle domain LI64_RS04495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI64_RS04500 PF13580 SIS domain LI64_RS04505 PF13230 Glutamine amidotransferases class-II LI64_RS04510 PF03734 L,D-transpeptidase catalytic domain LI64_RS04515 PF11973 NQRA C-terminal domain LI64_RS04515 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LI64_RS04520 PF03116 NQR2, RnfD, RnfE family LI64_RS04525 PF04205 FMN-binding domain LI64_RS04530 PF02508 Rnf-Nqr subunit, membrane protein LI64_RS04535 PF02508 Rnf-Nqr subunit, membrane protein LI64_RS04540 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS04540 PF00970 Oxidoreductase FAD-binding domain LI64_RS04540 PF00175 Oxidoreductase NAD-binding domain LI64_RS04545 PF04400 (Na+)-NQR maturation NqrM LI64_RS04550 PF11799 impB/mucB/samB family C-terminal domain LI64_RS04550 PF00817 impB/mucB/samB family LI64_RS04550 PF11798 IMS family HHH motif LI64_RS04555 PF01546 Peptidase family M20/M25/M40 LI64_RS04555 PF07687 Peptidase dimerisation domain LI64_RS04560 PF00156 Phosphoribosyl transferase domain LI64_RS04565 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LI64_RS04570 PF07417 Sigma factor-binding transcriptional regulator Crl LI64_RS04575 PF00267 Gram-negative porin LI64_RS04580 PF00696 Amino acid kinase family LI64_RS04580 PF01472 PUA domain LI64_RS04585 PF00171 Aldehyde dehydrogenase family LI64_RS04595 PF13737 Transposase DDE domain LI64_RS04600 PF06755 CbtA_toxin of type IV toxin-antitoxin system LI64_RS04605 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A LI64_RS04610 PF06174 Protein of unknown function (DUF987) LI64_RS04615 PF04002 RadC-like JAB domain LI64_RS04630 PF02028 BCCT, betaine/carnitine/choline family transporter LI64_RS04635 PF10011 Predicted membrane protein (DUF2254) LI64_RS04640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI64_RS04645 PF03466 LysR substrate binding domain LI64_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS04650 PF13737 Transposase DDE domain LI64_RS04655 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS04655 PF13188 PAS domain LI64_RS04655 PF00563 EAL domain LI64_RS04655 PF03707 Bacterial signalling protein N terminal repeat LI64_RS04670 PF00106 short chain dehydrogenase LI64_RS04675 PF03466 LysR substrate binding domain LI64_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS04685 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS04690 PF01594 AI-2E family transporter LI64_RS04695 PF00324 Amino acid permease LI64_RS04700 PF02574 Homocysteine S-methyltransferase LI64_RS04705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI64_RS04710 PF00005 ABC transporter LI64_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS04720 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LI64_RS04730 PF00490 Delta-aminolevulinic acid dehydratase LI64_RS04735 PF03797 Autotransporter beta-domain LI64_RS04740 PF15977 Winged helix-turn-helix DNA binding LI64_RS04745 PF00144 Beta-lactamase LI64_RS04750 PF05992 SbmA/BacA-like family LI64_RS04755 PF07759 Protein of unknown function (DUF1615) LI64_RS04760 PF10954 Protein of unknown function (DUF2755) LI64_RS04765 PF10953 Protein of unknown function (DUF2754) LI64_RS04770 PF07478 D-ala D-ala ligase C-terminus LI64_RS04770 PF01820 D-ala D-ala ligase N-terminus LI64_RS04780 PF07690 Major Facilitator Superfamily LI64_RS04785 PF10796 Sigma-S stabilisation anti-adaptor protein LI64_RS04790 PF07769 psiF repeat LI64_RS04795 PF05230 MASE2 domain LI64_RS04795 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS04800 PF03807 NADP oxidoreductase coenzyme F420-dependent LI64_RS04800 PF14748 Pyrroline-5-carboxylate reductase dimerisation LI64_RS04805 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LI64_RS04810 PF01202 Shikimate kinase LI64_RS04815 PF16362 YaiA protein LI64_RS04820 PF07302 AroM protein LI64_RS04825 PF06865 Pyrimidine/purine nucleoside phosphorylase LI64_RS04830 PF04381 Putative exonuclease, RdgC LI64_RS04835 PF00480 ROK family LI64_RS04840 PF13476 AAA domain LI64_RS04845 PF00149 Calcineurin-like phosphoesterase LI64_RS04845 PF12320 Type 5 capsule protein repressor C-terminal domain LI64_RS04850 PF00486 Transcriptional regulatory protein, C terminal LI64_RS04850 PF00072 Response regulator receiver domain LI64_RS04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS04855 PF11808 Phosphate regulon sensor protein PhoR LI64_RS04855 PF00989 PAS fold LI64_RS04855 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS04860 PF05525 Branched-chain amino acid transport protein LI64_RS04865 PF00324 Amino acid permease LI64_RS04870 PF02903 Alpha amylase, N-terminal ig-like domain LI64_RS04870 PF00128 Alpha amylase, catalytic domain LI64_RS04885 PF10417 C-terminal domain of 1-Cys peroxiredoxin LI64_RS04885 PF00578 AhpC/TSA family LI64_RS04890 PF04336 Acyl carrier protein phosphodiesterase LI64_RS04895 PF02547 Queuosine biosynthesis protein LI64_RS04900 PF01702 Queuine tRNA-ribosyltransferase LI64_RS04905 PF02699 Preprotein translocase subunit LI64_RS04910 PF07549 SecD/SecF GG Motif LI64_RS04910 PF02355 Protein export membrane protein LI64_RS04910 PF13721 SecD export protein N-terminal TM region LI64_RS04915 PF07549 SecD/SecF GG Motif LI64_RS04915 PF02355 Protein export membrane protein LI64_RS04930 PF03502 Nucleoside-specific channel-forming protein, Tsx LI64_RS04935 PF11622 Protein of unknown function (DUF3251) LI64_RS04940 PF03477 ATP cone domain LI64_RS04945 PF01872 RibD C-terminal domain LI64_RS04945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI64_RS04950 PF00885 6,7-dimethyl-8-ribityllumazine synthase LI64_RS04955 PF01029 NusB family LI64_RS04960 PF02769 AIR synthase related protein, C-terminal domain LI64_RS04960 PF00586 AIR synthase related protein, N-terminal domain LI64_RS04965 PF00248 Aldo/keto reductase family LI64_RS04970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LI64_RS04970 PF02779 Transketolase, pyrimidine binding domain LI64_RS04970 PF02780 Transketolase, C-terminal domain LI64_RS04975 PF00348 Polyprenyl synthetase LI64_RS04980 PF02609 Exonuclease VII small subunit LI64_RS04985 PF02926 THUMP domain LI64_RS04985 PF02568 Thiamine biosynthesis protein (ThiI) LI64_RS04990 PF01965 DJ-1/PfpI family LI64_RS04995 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI64_RS04995 PF02558 Ketopantoate reductase PanE/ApbA LI64_RS05000 PF04461 Protein of unknown function (DUF520) LI64_RS05010 PF13737 Transposase DDE domain LI64_RS05015 PF06551 Protein of unknown function (DUF1120) LI64_RS05020 PF07690 Major Facilitator Superfamily LI64_RS05025 PF00596 Class II Aldolase and Adducin N-terminal domain LI64_RS05030 PF00356 Bacterial regulatory proteins, lacI family LI64_RS05035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS05035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS05045 PF02653 Branched-chain amino acid transport system / permease component LI64_RS05050 PF00005 ABC transporter LI64_RS05055 PF07882 L-fucose isomerase, second N-terminal domain LI64_RS05055 PF07881 L-fucose isomerase, first N-terminal domain LI64_RS05055 PF02952 L-fucose isomerase, C-terminal domain LI64_RS05060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS05060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS05065 PF05025 RbsD / FucU transport protein family LI64_RS05070 PF01040 UbiA prenyltransferase family LI64_RS05075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LI64_RS05080 PF00510 Cytochrome c oxidase subunit III LI64_RS05085 PF00115 Cytochrome C and Quinol oxidase polypeptide I LI64_RS05090 PF06481 COX Aromatic Rich Motif LI64_RS05090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LI64_RS05100 PF07690 Major Facilitator Superfamily LI64_RS05105 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LI64_RS05105 PF03923 Uncharacterized lipoprotein LI64_RS05110 PF01722 BolA-like protein LI64_RS05115 PF05698 Bacterial trigger factor protein (TF) C-terminus LI64_RS05115 PF05697 Bacterial trigger factor protein (TF) LI64_RS05115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI64_RS05120 PF00574 Clp protease LI64_RS05125 PF06689 ClpX C4-type zinc finger LI64_RS05125 PF10431 C-terminal, D2-small domain, of ClpB protein LI64_RS05125 PF07724 AAA domain (Cdc48 subfamily) LI64_RS05130 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS05130 PF05362 Lon protease (S16) C-terminal proteolytic domain LI64_RS05130 PF02190 ATP-dependent protease La (LON) substrate-binding domain LI64_RS05135 PF00216 Bacterial DNA-binding protein LI64_RS05140 PF13145 PPIC-type PPIASE domain LI64_RS05155 PF06508 Queuosine biosynthesis protein QueC LI64_RS05160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS05160 PF12793 Sugar transport-related sRNA regulator N-term LI64_RS05170 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS05175 PF01037 Lrp/AsnC ligand binding domain LI64_RS05175 PF13404 AsnC-type helix-turn-helix domain LI64_RS05180 PF00664 ABC transporter transmembrane region LI64_RS05180 PF00005 ABC transporter LI64_RS05185 PF00664 ABC transporter transmembrane region LI64_RS05185 PF00005 ABC transporter LI64_RS05190 PF00543 Nitrogen regulatory protein P-II LI64_RS05195 PF00909 Ammonium Transporter Family LI64_RS05205 PF09619 Type III secretion system lipoprotein chaperone (YscW) LI64_RS05210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI64_RS05225 PF00155 Aminotransferase class I and II LI64_RS05225 PF00392 Bacterial regulatory proteins, gntR family LI64_RS05235 PF00356 Bacterial regulatory proteins, lacI family LI64_RS05240 PF02837 Glycosyl hydrolases family 2, sugar binding domain LI64_RS05240 PF16353 Domain of unknown function(DUF4981) LI64_RS05240 PF00703 Glycosyl hydrolases family 2 LI64_RS05240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LI64_RS05240 PF02929 Beta galactosidase small chain LI64_RS05245 PF03824 High-affinity nickel-transport protein LI64_RS05250 PF02583 Metal-sensitive transcriptional repressor LI64_RS05255 PF00563 EAL domain LI64_RS05255 PF12792 CSS motif domain associated with EAL LI64_RS05260 PF01197 Ribosomal protein L31 LI64_RS05265 PF00444 Ribosomal protein L36 LI64_RS05270 PF10777 Inner membrane protein YlaC LI64_RS05275 PF12464 Maltose acetyltransferase LI64_RS05275 PF14602 Hexapeptide repeat of succinyl-transferase LI64_RS05280 PF05321 Haemolysin expression modulating protein LI64_RS05285 PF10757 Biofilm formation regulator YbaJ LI64_RS05290 PF00873 AcrB/AcrD/AcrF family LI64_RS05295 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS05295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS05300 PF00440 Bacterial regulatory proteins, tetR family LI64_RS05300 PF08361 MAATS-type transcriptional repressor, C-terminal region LI64_RS05305 PF12794 Mechanosensitive ion channel inner membrane domain 1 LI64_RS05305 PF00924 Mechanosensitive ion channel LI64_RS05305 PF12795 Mechanosensitive ion channel porin domain LI64_RS05310 PF10689 Protein of unknown function (DUF2496) LI64_RS05315 PF07445 Primosomal replication protein priC LI64_RS05320 PF04304 Protein of unknown function (DUF454) LI64_RS05325 PF00156 Phosphoribosyl transferase domain LI64_RS05330 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LI64_RS05330 PF12170 DNA polymerase III tau subunit V interacting with alpha LI64_RS05330 PF12169 DNA polymerase III subunits gamma and tau domain III LI64_RS05335 PF02575 YbaB/EbfC DNA-binding family LI64_RS05340 PF02132 RecR protein LI64_RS05340 PF13662 Toprim domain LI64_RS05345 PF00183 Hsp90 protein LI64_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS05350 PF05191 Adenylate kinase, active site lid LI64_RS05355 PF00762 Ferrochelatase LI64_RS05360 PF00294 pfkB family carbohydrate kinase LI64_RS05365 PF02254 TrkA-N domain LI64_RS05365 PF00999 Sodium/hydrogen exchanger family LI64_RS05370 PF07690 Major Facilitator Superfamily LI64_RS05375 PF00149 Calcineurin-like phosphoesterase LI64_RS05375 PF02872 5'-nucleotidase, C-terminal domain LI64_RS05380 PF04073 Aminoacyl-tRNA editing domain LI64_RS05385 PF01963 TraB family LI64_RS05390 PF00403 Heavy-metal-associated domain LI64_RS05395 PF13411 MerR HTH family regulatory protein LI64_RS05400 PF01957 NfeD-like C-terminal, partner-binding LI64_RS05405 PF01145 SPFH domain / Band 7 family LI64_RS05405 PF16200 C-terminal region of band_7 LI64_RS05415 PF00005 ABC transporter LI64_RS05420 PF03649 Uncharacterised protein family (UPF0014) LI64_RS05425 PF00085 Thioredoxin LI64_RS05430 PF00106 short chain dehydrogenase LI64_RS05435 PF13472 GDSL-like Lipase/Acylhydrolase family LI64_RS05440 PF00005 ABC transporter LI64_RS05450 PF00267 Gram-negative porin LI64_RS05460 PF02222 ATP-grasp domain LI64_RS05460 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LI64_RS05465 PF00731 AIR carboxylase LI64_RS05470 PF00149 Calcineurin-like phosphoesterase LI64_RS05475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI64_RS05480 PF09190 DALR domain LI64_RS05480 PF01406 tRNA synthetases class I (C) catalytic domain LI64_RS05485 PF04307 LexA-binding, inner membrane-associated putative hydrolase LI64_RS05490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS05490 PF00356 Bacterial regulatory proteins, lacI family LI64_RS05495 PF00367 phosphotransferase system, EIIB LI64_RS05495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS05495 PF02378 Phosphotransferase system, EIIC LI64_RS05505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LI64_RS05505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LI64_RS05510 PF00419 Fimbrial protein LI64_RS05520 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS05520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS05525 PF00577 Outer membrane usher protein LI64_RS05525 PF13954 PapC N-terminal domain LI64_RS05525 PF13953 PapC C-terminal domain LI64_RS05530 PF00419 Fimbrial protein LI64_RS05535 PF00419 Fimbrial protein LI64_RS05540 PF00196 Bacterial regulatory proteins, luxR family LI64_RS05540 PF00072 Response regulator receiver domain LI64_RS05560 PF00589 Phage integrase family LI64_RS05610 PF00436 Single-strand binding protein family LI64_RS05620 PF04098 Rad52/22 family double-strand break repair protein LI64_RS05665 PF01381 Helix-turn-helix LI64_RS05665 PF00717 Peptidase S24-like LI64_RS05755 PF03245 Bacteriophage Rz lysis protein LI64_RS05880 PF00535 Glycosyl transferase family 2 LI64_RS05885 PF04138 GtrA-like protein LI64_RS05890 PF00717 Peptidase S24-like LI64_RS05895 PF07338 Protein of unknown function (DUF1471) LI64_RS05900 PF00593 TonB dependent receptor LI64_RS05900 PF07715 TonB-dependent Receptor Plug Domain LI64_RS05910 PF00324 Amino acid permease LI64_RS05915 PF03825 Nucleoside H+ symporter LI64_RS05930 PF00356 Bacterial regulatory proteins, lacI family LI64_RS05935 PF00924 Mechanosensitive ion channel LI64_RS05940 PF07690 Major Facilitator Superfamily LI64_RS05955 PF00881 Nitroreductase family LI64_RS05960 PF04237 YjbR LI64_RS05965 PF16295 Tetracyclin repressor-like, C-terminal domain LI64_RS05965 PF00440 Bacterial regulatory proteins, tetR family LI64_RS05970 PF12706 Beta-lactamase superfamily domain LI64_RS05975 PF12833 Helix-turn-helix domain LI64_RS05980 PF06643 Protein of unknown function (DUF1158) LI64_RS05990 PF13533 Biotin-lipoyl like LI64_RS05995 PF00873 AcrB/AcrD/AcrF family LI64_RS06000 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI64_RS06005 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI64_RS06005 PF02558 Ketopantoate reductase PanE/ApbA LI64_RS06020 PF13936 Helix-turn-helix domain LI64_RS06020 PF00665 Integrase core domain LI64_RS06030 PF02558 Ketopantoate reductase PanE/ApbA LI64_RS06030 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI64_RS06035 PF01381 Helix-turn-helix LI64_RS06055 PF03466 LysR substrate binding domain LI64_RS06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS06060 PF03306 Alpha-acetolactate decarboxylase LI64_RS06065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS06065 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS06065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS06070 PF00106 short chain dehydrogenase LI64_RS06085 PF00732 GMC oxidoreductase LI64_RS06085 PF05199 GMC oxidoreductase LI64_RS06090 PF00171 Aldehyde dehydrogenase family LI64_RS06095 PF00440 Bacterial regulatory proteins, tetR family LI64_RS06095 PF13977 BetI-type transcriptional repressor, C-terminal LI64_RS06100 PF02028 BCCT, betaine/carnitine/choline family transporter LI64_RS06105 PF01297 Zinc-uptake complex component A periplasmic LI64_RS06110 PF00005 ABC transporter LI64_RS06115 PF00950 ABC 3 transport family LI64_RS06120 PF00950 ABC 3 transport family LI64_RS06125 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LI64_RS06125 PF01648 4'-phosphopantetheinyl transferase superfamily LI64_RS06130 PF00593 TonB dependent receptor LI64_RS06130 PF07715 TonB-dependent Receptor Plug Domain LI64_RS06135 PF11806 Domain of unknown function (DUF3327) LI64_RS06135 PF00756 Putative esterase LI64_RS06140 PF03621 MbtH-like protein LI64_RS06145 PF00975 Thioesterase domain LI64_RS06145 PF00550 Phosphopantetheine attachment site LI64_RS06145 PF00668 Condensation domain LI64_RS06145 PF13193 AMP-binding enzyme C-terminal domain LI64_RS06145 PF00501 AMP-binding enzyme LI64_RS06150 PF00005 ABC transporter LI64_RS06155 PF01032 FecCD transport family LI64_RS06160 PF01032 FecCD transport family LI64_RS06165 PF05977 Transmembrane secretion effector LI64_RS06170 PF01497 Periplasmic binding protein LI64_RS06175 PF00425 chorismate binding enzyme LI64_RS06180 PF13193 AMP-binding enzyme C-terminal domain LI64_RS06180 PF00501 AMP-binding enzyme LI64_RS06185 PF00550 Phosphopantetheine attachment site LI64_RS06185 PF00857 Isochorismatase family LI64_RS06195 PF03061 Thioesterase superfamily LI64_RS06200 PF02554 Carbon starvation protein CstA LI64_RS06200 PF13722 5TM C-terminal transporter carbon starvation CstA LI64_RS06205 PF04328 Selenoprotein, putative LI64_RS06225 PF00465 Iron-containing alcohol dehydrogenase LI64_RS06230 PF00005 ABC transporter LI64_RS06235 PF02653 Branched-chain amino acid transport system / permease component LI64_RS06250 PF01636 Phosphotransferase enzyme family LI64_RS06255 PF01008 Initiation factor 2 subunit family LI64_RS06260 PF03079 ARD/ARD' family LI64_RS06270 PF00596 Class II Aldolase and Adducin N-terminal domain LI64_RS06275 PF00155 Aminotransferase class I and II LI64_RS06280 PF02195 ParB-like nuclease domain LI64_RS06285 PF01507 Phosphoadenosine phosphosulfate reductase family LI64_RS06285 PF11922 Domain of unknown function (DUF3440) LI64_RS06290 PF03466 LysR substrate binding domain LI64_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS06295 PF00578 AhpC/TSA family LI64_RS06295 PF10417 C-terminal domain of 1-Cys peroxiredoxin LI64_RS06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS06300 PF13192 Thioredoxin domain LI64_RS06305 PF00582 Universal stress protein family LI64_RS06310 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS06310 PF00107 Zinc-binding dehydrogenase LI64_RS06310 PF13823 Alcohol dehydrogenase GroES-associated LI64_RS06315 PF14760 Rnk N-terminus LI64_RS06315 PF01272 Transcription elongation factor, GreA/GreB, C-term LI64_RS06325 PF00445 Ribonuclease T2 family LI64_RS06330 PF03606 C4-dicarboxylate anaerobic carrier LI64_RS06350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS06350 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS06355 PF00873 AcrB/AcrD/AcrF family LI64_RS06360 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LI64_RS06365 PF00313 'Cold-shock' DNA-binding domain LI64_RS06370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LI64_RS06375 PF00795 Carbon-nitrogen hydrolase LI64_RS06380 PF02416 mttA/Hcf106 family LI64_RS06385 PF04055 Radical SAM superfamily LI64_RS06385 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LI64_RS06390 PF03466 LysR substrate binding domain LI64_RS06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS06395 PF03099 Biotin/lipoate A/B protein ligase family LI64_RS06400 PF04359 Protein of unknown function (DUF493) LI64_RS06405 PF00768 D-alanyl-D-alanine carboxypeptidase LI64_RS06405 PF07943 Penicillin-binding protein 5, C-terminal domain LI64_RS06410 PF05036 Sporulation related domain LI64_RS06410 PF03330 Lytic transglycolase LI64_RS06415 PF01098 Cell cycle protein LI64_RS06420 PF00905 Penicillin binding protein transpeptidase domain LI64_RS06420 PF03717 Penicillin-binding Protein dimerisation domain LI64_RS06425 PF02590 Predicted SPOUT methyltransferase LI64_RS06435 PF01467 Cytidylyltransferase-like LI64_RS06440 PF06144 DNA polymerase III, delta subunit LI64_RS06440 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LI64_RS06445 PF04390 Lipopolysaccharide-assembly LI64_RS06450 PF08264 Anticodon-binding domain of tRNA LI64_RS06450 PF00133 tRNA synthetases class I (I, L, M and V) LI64_RS06450 PF13603 Leucyl-tRNA synthetase, Domain 2 LI64_RS06455 PF07295 Zinc-ribbon containing domain LI64_RS06475 PF01156 Inosine-uridine preferring nucleoside hydrolase LI64_RS06480 PF00005 ABC transporter LI64_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS06495 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS06500 PF00795 Carbon-nitrogen hydrolase LI64_RS06505 PF03471 Transporter associated domain LI64_RS06505 PF00571 CBS domain LI64_RS06510 PF02130 Uncharacterized protein family UPF0054 LI64_RS06515 PF02562 PhoH-like protein LI64_RS06520 PF01938 TRAM domain LI64_RS06520 PF04055 Radical SAM superfamily LI64_RS06520 PF00919 Uncharacterized protein family UPF0004 LI64_RS06525 PF01494 FAD binding domain LI64_RS06565 PF13537 Glutamine amidotransferase domain LI64_RS06565 PF00733 Asparagine synthase LI64_RS06570 PF13344 Haloacid dehalogenase-like hydrolase LI64_RS06575 PF01047 MarR family LI64_RS06575 PF00480 ROK family LI64_RS06580 PF01979 Amidohydrolase family LI64_RS06585 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI64_RS06590 PF00367 phosphotransferase system, EIIB LI64_RS06590 PF02378 Phosphotransferase system, EIIC LI64_RS06590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS06595 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI64_RS06595 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LI64_RS06600 PF03573 outer membrane porin, OprD family LI64_RS06605 PF13982 YbfN-like lipoprotein LI64_RS06610 PF01475 Ferric uptake regulator family LI64_RS06615 PF00258 Flavodoxin LI64_RS06620 PF01402 Ribbon-helix-helix protein, copG family LI64_RS06625 PF12697 Alpha/beta hydrolase family LI64_RS06630 PF03925 SeqA protein C-terminal domain LI64_RS06630 PF17206 SeqA protein N-terminal domain LI64_RS06635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI64_RS06635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI64_RS06635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI64_RS06635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI64_RS06640 PF13520 Amino acid permease LI64_RS06645 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI64_RS06645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI64_RS06645 PF01276 Orn/Lys/Arg decarboxylase, major domain LI64_RS06650 PF00486 Transcriptional regulatory protein, C terminal LI64_RS06650 PF00072 Response regulator receiver domain LI64_RS06655 PF13492 GAF domain LI64_RS06655 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS06655 PF02702 Osmosensitive K+ channel His kinase sensor domain LI64_RS06655 PF13493 Domain of unknown function (DUF4118) LI64_RS06660 PF02669 K+-transporting ATPase, c chain LI64_RS06670 PF03814 Potassium-transporting ATPase A subunit LI64_RS06675 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) LI64_RS06680 PF10725 Protein of unknown function (DUF2517) LI64_RS06685 PF03441 FAD binding domain of DNA photolyase LI64_RS06685 PF00875 DNA photolyase LI64_RS06690 PF01784 NIF3 (NGG1p interacting factor 3) LI64_RS06695 PF02682 Carboxyltransferase domain, subdomain C and D LI64_RS06700 PF02626 Carboxyltransferase domain, subdomain A and B LI64_RS06705 PF03746 LamB/YcsF family LI64_RS06710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI64_RS06710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI64_RS06715 PF00285 Citrate synthase, C-terminal domain LI64_RS06720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LI64_RS06725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LI64_RS06730 PF00890 FAD binding domain LI64_RS06730 PF02910 Fumarate reductase flavoprotein C-term LI64_RS06735 PF13085 2Fe-2S iron-sulfur cluster binding domain LI64_RS06740 PF16870 2-oxoglutarate dehydrogenase C-terminal LI64_RS06740 PF00676 Dehydrogenase E1 component LI64_RS06740 PF02779 Transketolase, pyrimidine binding domain LI64_RS06740 PF16078 2-oxoglutarate dehydrogenase N-terminus LI64_RS06745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI64_RS06745 PF00364 Biotin-requiring enzyme LI64_RS06745 PF02817 e3 binding domain LI64_RS06750 PF00549 CoA-ligase LI64_RS06750 PF08442 ATP-grasp domain LI64_RS06755 PF02629 CoA binding domain LI64_RS06755 PF00549 CoA-ligase LI64_RS06770 PF14863 Alkyl sulfatase dimerisation LI64_RS06770 PF00753 Metallo-beta-lactamase superfamily LI64_RS06770 PF14864 Alkyl sulfatase C-terminal LI64_RS06775 PF00392 Bacterial regulatory proteins, gntR family LI64_RS06775 PF07702 UTRA domain LI64_RS06780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS06780 PF02378 Phosphotransferase system, EIIC LI64_RS06780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS06785 PF09261 Alpha mannosidase middle domain LI64_RS06785 PF01074 Glycosyl hydrolases family 38 N-terminal domain LI64_RS06785 PF07748 Glycosyl hydrolases family 38 C-terminal domain LI64_RS06790 PF01654 Cytochrome bd terminal oxidase subunit I LI64_RS06795 PF02322 Cytochrome bd terminal oxidase subunit II LI64_RS06800 PF08173 Membrane bound YbgT-like protein LI64_RS06805 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LI64_RS06810 PF03061 Thioesterase superfamily LI64_RS06815 PF01618 MotA/TolQ/ExbB proton channel family LI64_RS06820 PF02472 Biopolymer transport protein ExbD/TolR LI64_RS06825 PF06519 TolA C-terminal LI64_RS06830 PF04052 TolB amino-terminal domain LI64_RS06830 PF07676 WD40-like Beta Propeller Repeat LI64_RS06835 PF00691 OmpA family LI64_RS06840 PF16331 TolA binding protein trimerisation LI64_RS06840 PF13174 Tetratricopeptide repeat LI64_RS06870 PF02445 Quinolinate synthetase A protein LI64_RS06875 PF04973 Nicotinamide mononucleotide transporter LI64_RS06880 PF01545 Cation efflux family LI64_RS06885 PF13985 YbgS-like protein LI64_RS06890 PF00793 DAHP synthetase I family LI64_RS06895 PF00300 Histidine phosphatase superfamily (branch 1) LI64_RS06905 PF01263 Aldose 1-epimerase LI64_RS06910 PF08544 GHMP kinases C terminal LI64_RS06910 PF10509 Galactokinase galactose-binding signature LI64_RS06910 PF00288 GHMP kinases N terminal domain LI64_RS06915 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LI64_RS06915 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LI64_RS06920 PF16363 GDP-mannose 4,6 dehydratase LI64_RS06925 PF00005 ABC transporter LI64_RS06930 PF03459 TOBE domain LI64_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS06935 PF10766 Multidrug efflux pump-associated protein AcrZ LI64_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS06950 PF00005 ABC transporter LI64_RS06950 PF03459 TOBE domain LI64_RS06960 PF10282 Lactonase, 7-bladed beta-propeller LI64_RS06965 PF01095 Pectinesterase LI64_RS06970 PF01979 Amidohydrolase family LI64_RS06975 PF00491 Arginase family LI64_RS06980 PF07702 UTRA domain LI64_RS06980 PF00392 Bacterial regulatory proteins, gntR family LI64_RS06985 PF01175 Urocanase Rossmann-like domain LI64_RS06985 PF17392 Urocanase C-terminal domain LI64_RS06985 PF17391 Urocanase N-terminal domain LI64_RS06990 PF00221 Aromatic amino acid lyase LI64_RS06995 PF01161 Phosphatidylethanolamine-binding protein LI64_RS07000 PF00202 Aminotransferase class-III LI64_RS07005 PF04055 Radical SAM superfamily LI64_RS07005 PF06968 Biotin and Thiamin Synthesis associated domain LI64_RS07010 PF00155 Aminotransferase class I and II LI64_RS07015 PF08241 Methyltransferase domain LI64_RS07025 PF00005 ABC transporter LI64_RS07025 PF09383 NIL domain LI64_RS07030 PF00271 Helicase conserved C-terminal domain LI64_RS07030 PF04851 Type III restriction enzyme, res subunit LI64_RS07030 PF02151 UvrB/uvrC motif LI64_RS07030 PF12344 Ultra-violet resistance protein B LI64_RS07030 PF17757 UvrB interaction domain LI64_RS07035 PF01933 Uncharacterised protein family UPF0052 LI64_RS07040 PF06463 Molybdenum Cofactor Synthesis C LI64_RS07040 PF04055 Radical SAM superfamily LI64_RS07045 PF00994 Probable molybdopterin binding domain LI64_RS07050 PF01967 MoaC family LI64_RS07055 PF02597 ThiS family LI64_RS07060 PF02391 MoaE protein LI64_RS07065 PF01027 Inhibitor of apoptosis-promoting Bax1 LI64_RS07070 PF03706 Lysylphosphatidylglycerol synthase TM region LI64_RS07075 PF13091 PLD-like domain LI64_RS07080 PF03372 Endonuclease/Exonuclease/phosphatase family LI64_RS07085 PF11076 Putative inner membrane protein YbhQ LI64_RS07100 PF00005 ABC transporter LI64_RS07105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS07110 PF09209 Tetracyclin repressor-like, C-terminal domain LI64_RS07110 PF00440 Bacterial regulatory proteins, tetR family LI64_RS07115 PF00271 Helicase conserved C-terminal domain LI64_RS07115 PF00270 DEAD/DEAH box helicase LI64_RS07120 PF00270 DEAD/DEAH box helicase LI64_RS07120 PF06733 DEAD_2 LI64_RS07120 PF13307 Helicase C-terminal domain LI64_RS07135 PF00577 Outer membrane usher protein LI64_RS07135 PF13954 PapC N-terminal domain LI64_RS07135 PF13953 PapC C-terminal domain LI64_RS07140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS07140 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS07145 PF00419 Fimbrial protein LI64_RS07150 PF02885 Glycosyl transferase family, helical bundle domain LI64_RS07155 PF07338 Protein of unknown function (DUF1471) LI64_RS07160 PF01258 Prokaryotic dksA/traR C4-type zinc finger LI64_RS07165 PF07338 Protein of unknown function (DUF1471) LI64_RS07175 PF05971 RNA methyltransferase LI64_RS07180 PF00924 Mechanosensitive ion channel LI64_RS07185 PF00005 ABC transporter LI64_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07195 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS07200 PF00210 Ferritin-like domain LI64_RS07205 PF00892 EamA-like transporter family LI64_RS07210 PF13505 Outer membrane protein beta-barrel domain LI64_RS07215 PF00884 Sulfatase LI64_RS07225 PF02742 Iron dependent repressor, metal binding and dimerisation domain LI64_RS07225 PF01325 Iron dependent repressor, N-terminal DNA binding domain LI64_RS07230 PF03600 Citrate transporter LI64_RS07235 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS07235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS07240 PF07690 Major Facilitator Superfamily LI64_RS07245 PF02321 Outer membrane efflux protein LI64_RS07250 PF00232 Glycosyl hydrolase family 1 LI64_RS07255 PF02378 Phosphotransferase system, EIIC LI64_RS07260 PF00392 Bacterial regulatory proteins, gntR family LI64_RS07260 PF07702 UTRA domain LI64_RS07265 PF17969 L,D-transpeptidase C-terminal domain LI64_RS07265 PF03734 L,D-transpeptidase catalytic domain LI64_RS07270 PF12848 ABC transporter LI64_RS07270 PF00005 ABC transporter LI64_RS07275 PF17137 Domain of unknown function (DUF5110) LI64_RS07275 PF13802 Galactose mutarotase-like LI64_RS07275 PF01055 Glycosyl hydrolases family 31 LI64_RS07275 PF16338 Domain of unknown function (DUF4968) LI64_RS07280 PF07690 Major Facilitator Superfamily LI64_RS07285 PF00356 Bacterial regulatory proteins, lacI family LI64_RS07290 PF07350 Protein of unknown function (DUF1479) LI64_RS07300 PF02901 Pyruvate formate lyase-like LI64_RS07300 PF01228 Glycine radical LI64_RS07305 PF04055 Radical SAM superfamily LI64_RS07310 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI64_RS07315 PF00899 ThiF family LI64_RS07320 PF00994 Probable molybdopterin binding domain LI64_RS07320 PF03453 MoeA N-terminal region (domain I and II) LI64_RS07320 PF03454 MoeA C-terminal region (domain IV) LI64_RS07325 PF01112 Asparaginase LI64_RS07330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS07330 PF00005 ABC transporter LI64_RS07335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07345 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS07350 PF04055 Radical SAM superfamily LI64_RS07350 PF18693 TRAM domain LI64_RS07350 PF00919 Uncharacterized protein family UPF0004 LI64_RS07355 PF10799 Biofilm formation protein (YliH/bssR) LI64_RS07360 PF07995 Glucose / Sorbosone dehydrogenase LI64_RS07365 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS07365 PF13417 Glutathione S-transferase, N-terminal domain LI64_RS07370 PF07943 Penicillin-binding protein 5, C-terminal domain LI64_RS07370 PF00768 D-alanyl-D-alanine carboxypeptidase LI64_RS07375 PF00455 DeoR C terminal sensor domain LI64_RS07375 PF08220 DeoR-like helix-turn-helix domain LI64_RS07380 PF01569 PAP2 superfamily LI64_RS07390 PF07690 Major Facilitator Superfamily LI64_RS07405 PF00440 Bacterial regulatory proteins, tetR family LI64_RS07410 PF03960 ArsC family LI64_RS07430 PF02080 TrkA-C domain LI64_RS07430 PF06826 Predicted Permease Membrane Region LI64_RS07435 PF11045 Putative inner membrane protein of Enterobacteriaceae LI64_RS07440 PF00462 Glutaredoxin LI64_RS07445 PF00881 Nitroreductase family LI64_RS07450 PF08443 RimK-like ATP-grasp domain LI64_RS07450 PF18030 RimK PreATP-grasp domain LI64_RS07455 PF10722 Putative bacterial sensory transduction regulator LI64_RS07460 PF13416 Bacterial extracellular solute-binding protein LI64_RS07465 PF08402 TOBE domain LI64_RS07465 PF00005 ABC transporter LI64_RS07470 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07480 PF10767 Protein of unknown function (DUF2593) LI64_RS07485 PF05958 tRNA (Uracil-5-)-methyltransferase LI64_RS07490 PF00486 Transcriptional regulatory protein, C terminal LI64_RS07490 PF00072 Response regulator receiver domain LI64_RS07495 PF18698 Histidine kinase sensor domain LI64_RS07495 PF00989 PAS fold LI64_RS07495 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS07495 PF00672 HAMP domain LI64_RS07500 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07510 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07515 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS07520 PF00005 ABC transporter LI64_RS07525 PF12883 Protein of unknown function (DUF3828) LI64_RS07530 PF01906 Putative heavy-metal-binding LI64_RS07535 PF01510 N-acetylmuramoyl-L-alanine amidase LI64_RS07540 PF15977 Winged helix-turn-helix DNA binding LI64_RS07555 PF11356 Type II secretion system protein C LI64_RS07560 PF00263 Bacterial type II and III secretion system protein LI64_RS07560 PF03958 Bacterial type II/III secretion system short domain LI64_RS07565 PF00437 Type II/IV secretion system protein LI64_RS07570 PF00482 Type II secretion system (T2SS), protein F LI64_RS07575 PF07963 Prokaryotic N-terminal methylation motif LI64_RS07575 PF08334 Type II secretion system (T2SS), protein G LI64_RS07580 PF07963 Prokaryotic N-terminal methylation motif LI64_RS07585 PF07963 Prokaryotic N-terminal methylation motif LI64_RS07585 PF02501 Type II secretion system (T2SS), protein I LI64_RS07590 PF07963 Prokaryotic N-terminal methylation motif LI64_RS07590 PF11612 Type II secretion system (T2SS), protein J LI64_RS07595 PF03934 Type II secretion system (T2SS), protein K LI64_RS07610 PF01478 Type IV leader peptidase family LI64_RS07610 PF06750 Bacterial Peptidase A24 N-terminal domain LI64_RS07615 PF00704 Glycosyl hydrolases family 18 LI64_RS07615 PF08329 Chitinase A, N-terminal domain LI64_RS07620 PF01464 Transglycosylase SLT domain LI64_RS07630 PF01370 NAD dependent epimerase/dehydratase family LI64_RS07635 PF13460 NAD(P)H-binding LI64_RS07635 PF11066 Protein of unknown function (DUF2867) LI64_RS07640 PF01212 Beta-eliminating lyase LI64_RS07645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS07645 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS07645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS07650 PF00970 Oxidoreductase FAD-binding domain LI64_RS07650 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS07650 PF00175 Oxidoreductase NAD-binding domain LI64_RS07655 PF03063 Prismane/CO dehydrogenase family LI64_RS07660 PF03956 Lysine exporter LysO LI64_RS07665 PF00230 Major intrinsic protein LI64_RS07670 PF11398 Protein of unknown function (DUF2813) LI64_RS07680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS07685 PF00005 ABC transporter LI64_RS07685 PF02687 FtsX-like permease family LI64_RS07685 PF12704 MacB-like periplasmic core domain LI64_RS07690 PF00313 'Cold-shock' DNA-binding domain LI64_RS07695 PF02617 ATP-dependent Clp protease adaptor protein ClpS LI64_RS07700 PF02861 Clp amino terminal domain, pathogenicity island component LI64_RS07700 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS07700 PF10431 C-terminal, D2-small domain, of ClpB protein LI64_RS07700 PF17871 AAA lid domain LI64_RS07700 PF07724 AAA domain (Cdc48 subfamily) LI64_RS07710 PF01176 Translation initiation factor 1A / IF-1 LI64_RS07715 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LI64_RS07720 PF00664 ABC transporter transmembrane region LI64_RS07720 PF00005 ABC transporter LI64_RS07725 PF00005 ABC transporter LI64_RS07725 PF00664 ABC transporter transmembrane region LI64_RS07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS07735 PF01037 Lrp/AsnC ligand binding domain LI64_RS07740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LI64_RS07740 PF01580 FtsK/SpoIIIE family LI64_RS07740 PF09397 Ftsk gamma domain LI64_RS07740 PF17854 FtsK alpha domain LI64_RS07745 PF03548 Outer membrane lipoprotein carrier protein LolA LI64_RS07750 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS07750 PF12002 MgsA AAA+ ATPase C terminal LI64_RS07750 PF16193 AAA C-terminal domain LI64_RS07755 PF02403 Seryl-tRNA synthetase N-terminal domain LI64_RS07755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI64_RS07760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS07760 PF00384 Molybdopterin oxidoreductase LI64_RS07760 PF01568 Molydopterin dinucleotide binding domain LI64_RS07765 PF12800 4Fe-4S binding domain LI64_RS07765 PF13247 4Fe-4S dicluster domain LI64_RS07770 PF04976 DMSO reductase anchor subunit (DmsC) LI64_RS07775 PF07690 Major Facilitator Superfamily LI64_RS07785 PF04055 Radical SAM superfamily LI64_RS07790 PF01228 Glycine radical LI64_RS07790 PF02901 Pyruvate formate lyase-like LI64_RS07795 PF01226 Formate/nitrite transporter LI64_RS07800 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LI64_RS07800 PF18381 YcaO cyclodehydratase C-terminal domain LI64_RS07805 PF04239 Protein of unknown function (DUF421) LI64_RS07810 PF00266 Aminotransferase class-V LI64_RS07815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI64_RS07820 PF02224 Cytidylate kinase LI64_RS07825 PF00575 S1 RNA binding domain LI64_RS07830 PF00216 Bacterial DNA-binding protein LI64_RS07835 PF00753 Metallo-beta-lactamase superfamily LI64_RS07835 PF03772 Competence protein LI64_RS07840 PF00664 ABC transporter transmembrane region LI64_RS07840 PF00005 ABC transporter LI64_RS07845 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LI64_RS07850 PF06224 Winged helix DNA-binding domain LI64_RS07855 PF03966 Trm112p-like protein LI64_RS07860 PF02348 Cytidylyltransferase LI64_RS07865 PF01636 Phosphotransferase enzyme family LI64_RS07870 PF02698 DUF218 domain LI64_RS07875 PF13847 Methyltransferase domain LI64_RS07880 PF03882 MukF winged-helix domain LI64_RS07880 PF17193 MukF C-terminal domain LI64_RS07880 PF17192 MukF middle domain LI64_RS07885 PF04288 MukE-like family LI64_RS07890 PF16330 MukB hinge domain LI64_RS07890 PF04310 MukB N-terminal LI64_RS07895 PF01471 Putative peptidoglycan binding domain LI64_RS07895 PF03734 L,D-transpeptidase catalytic domain LI64_RS07900 PF05951 Bacterial protein of unknown function (DUF882) LI64_RS07905 PF00753 Metallo-beta-lactamase superfamily LI64_RS07910 PF00155 Aminotransferase class I and II LI64_RS07915 PF00267 Gram-negative porin LI64_RS07920 PF01336 OB-fold nucleic acid binding domain LI64_RS07920 PF00152 tRNA synthetases class II (D, K and N) LI64_RS07925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LI64_RS07925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LI64_RS07930 PF01433 Peptidase family M1 domain LI64_RS07930 PF11940 Domain of unknown function (DUF3458) Ig-like fold LI64_RS07930 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LI64_RS07935 PF00005 ABC transporter LI64_RS07940 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS07945 PF00296 Luciferase-like monooxygenase LI64_RS07950 PF09084 NMT1/THI5 like LI64_RS07955 PF03358 NADPH-dependent FMN reductase LI64_RS07960 PF01180 Dihydroorotate dehydrogenase LI64_RS07965 PF07126 Cell-division protein ZapC LI64_RS07970 PF03476 MOSC N-terminal beta barrel domain LI64_RS07970 PF03473 MOSC domain LI64_RS07970 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS07975 PF01170 Putative RNA methylase family UPF0020 LI64_RS07975 PF10672 S-adenosylmethionine-dependent methyltransferase LI64_RS07975 PF02926 THUMP domain LI64_RS07980 PF12848 ABC transporter LI64_RS07980 PF16326 ABC transporter C-terminal domain LI64_RS07980 PF00005 ABC transporter LI64_RS07985 PF04403 Paraquat-inducible protein A LI64_RS07990 PF02470 MlaD protein LI64_RS07995 PF03886 ABC-type transport auxiliary lipoprotein component LI64_RS08000 PF04957 Ribosome modulation factor LI64_RS08005 PF07977 FabA-like domain LI64_RS08010 PF13654 AAA domain LI64_RS08010 PF05362 Lon protease (S16) C-terminal proteolytic domain LI64_RS08015 PF06303 MatP N-terminal domain LI64_RS08015 PF17414 MatP C-terminal ribbon-helix-helix domain LI64_RS08020 PF01389 OmpA-like transmembrane domain LI64_RS08020 PF00691 OmpA family LI64_RS08025 PF03846 Cell division inhibitor SulA LI64_RS08035 PF12805 FUSC-like inner membrane protein yccS LI64_RS08040 PF03733 Inner membrane component domain LI64_RS08045 PF13361 UvrD-like helicase C-terminal domain LI64_RS08045 PF12462 DNA helicase IV / RNA helicase N terminal LI64_RS08045 PF00580 UvrD/REP helicase N-terminal domain LI64_RS08050 PF02142 MGS-like domain LI64_RS08055 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LI64_RS08060 PF13380 CoA binding domain LI64_RS08065 PF08755 Hemimethylated DNA-binding protein YccV like LI64_RS08070 PF10672 S-adenosylmethionine-dependent methyltransferase LI64_RS08070 PF17785 PUA-like domain LI64_RS08075 PF00708 Acylphosphatase LI64_RS08080 PF04358 DsrC like protein LI64_RS08085 PF01027 Inhibitor of apoptosis-promoting Bax1 LI64_RS08090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS08100 PF00005 ABC transporter LI64_RS08105 PF01032 FecCD transport family LI64_RS08115 PF00924 Mechanosensitive ion channel LI64_RS08115 PF12795 Mechanosensitive ion channel porin domain LI64_RS08115 PF12794 Mechanosensitive ion channel inner membrane domain 1 LI64_RS08125 PF13936 Helix-turn-helix domain LI64_RS08125 PF00665 Integrase core domain LI64_RS08140 PF00571 CBS domain LI64_RS08140 PF01769 Divalent cation transporter LI64_RS08140 PF03448 MgtE intracellular N domain LI64_RS08145 PF09335 SNARE associated Golgi protein LI64_RS08150 PF00328 Histidine phosphatase superfamily (branch 2) LI64_RS08155 PF13993 YccJ-like protein LI64_RS08160 PF03358 NADPH-dependent FMN reductase LI64_RS08165 PF10685 Stress-induced bacterial acidophilic repeat motif LI64_RS08185 PF00860 Permease family LI64_RS08190 PF01613 Flavin reductase like domain LI64_RS08195 PF00881 Nitroreductase family LI64_RS08200 PF12697 Alpha/beta hydrolase family LI64_RS08205 PF01042 Endoribonuclease L-PSP LI64_RS08210 PF00857 Isochorismatase family LI64_RS08215 PF00296 Luciferase-like monooxygenase LI64_RS08220 PF08362 YcdC-like protein, C-terminal region LI64_RS08220 PF00440 Bacterial regulatory proteins, tetR family LI64_RS08230 PF00171 Aldehyde dehydrogenase family LI64_RS08230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LI64_RS08230 PF01619 Proline dehydrogenase LI64_RS08230 PF14850 DNA-binding domain of Proline dehydrogenase LI64_RS08235 PF00474 Sodium:solute symporter family LI64_RS08245 PF01773 Na+ dependent nucleoside transporter N-terminus LI64_RS08245 PF07662 Na+ dependent nucleoside transporter C-terminus LI64_RS08245 PF07670 Nucleoside recognition LI64_RS08250 PF03239 Iron permease FTR1 family LI64_RS08255 PF09375 Imelysin LI64_RS08255 PF13473 Cupredoxin-like domain LI64_RS08260 PF04261 Dyp-type peroxidase family LI64_RS08265 PF02562 PhoH-like protein LI64_RS08270 PF01235 Sodium:alanine symporter family LI64_RS08280 PF00857 Isochorismatase family LI64_RS08285 PF02678 Pirin LI64_RS08285 PF05726 Pirin C-terminal cupin domain LI64_RS08290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS08290 PF03466 LysR substrate binding domain LI64_RS08300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS08305 PF02811 PHP domain LI64_RS08310 PF02613 Nitrate reductase delta subunit LI64_RS08315 PF06496 Protein of unknown function (DUF1097) LI64_RS08320 PF03783 Curli production assembly/transport component CsgG LI64_RS08325 PF10614 Type VIII secretion system (T8SS), CsgF protein LI64_RS08330 PF10627 Curli assembly protein CsgE LI64_RS08335 PF00196 Bacterial regulatory proteins, luxR family LI64_RS08340 PF13737 Transposase DDE domain LI64_RS08345 PF00196 Bacterial regulatory proteins, luxR family LI64_RS08350 PF07012 Curlin associated repeat LI64_RS08355 PF07012 Curlin associated repeat LI64_RS08360 PF10610 Thin aggregative fimbriae synthesis protein LI64_RS08370 PF01661 Macro domain LI64_RS08375 PF01757 Acyltransferase family LI64_RS08380 PF04349 Periplasmic glucan biosynthesis protein, MdoG LI64_RS08385 PF00535 Glycosyl transferase family 2 LI64_RS08390 PF07119 Protein of unknown function (DUF1375) LI64_RS08395 PF13984 MsyB protein LI64_RS08400 PF07690 Major Facilitator Superfamily LI64_RS08405 PF03279 Bacterial lipid A biosynthesis acyltransferase LI64_RS08410 PF17773 UPF0176 acylphosphatase like domain LI64_RS08410 PF12368 Rhodanase C-terminal LI64_RS08410 PF00581 Rhodanese-like domain LI64_RS08415 PF04264 YceI-like domain LI64_RS08420 PF01292 Prokaryotic cytochrome b561 LI64_RS08425 PF10968 Protein of unknown function (DUF2770) LI64_RS08430 PF01266 FAD dependent oxidoreductase LI64_RS08435 PF13991 BssS protein family LI64_RS08440 PF06183 DinI-like family LI64_RS08445 PF01979 Amidohydrolase family LI64_RS08450 PF07273 Protein of unknown function (DUF1439) LI64_RS08455 PF07690 Major Facilitator Superfamily LI64_RS08460 PF13302 Acetyltransferase (GNAT) domain LI64_RS08465 PF04337 Protein of unknown function, DUF480 LI64_RS08470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS08475 PF03023 Lipid II flippase MurJ LI64_RS08480 PF05130 FlgN protein LI64_RS08485 PF04316 Anti-sigma-28 factor, FlgM LI64_RS08490 PF13144 Chaperone for flagella basal body P-ring formation LI64_RS08495 PF00460 Flagella basal body rod protein LI64_RS08500 PF00460 Flagella basal body rod protein LI64_RS08500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI64_RS08505 PF13861 FlgD Tudor-like domain LI64_RS08505 PF03963 Flagellar hook capping protein - N-terminal region LI64_RS08505 PF13860 FlgD Ig-like domain LI64_RS08510 PF07559 Flagellar basal body protein FlaE LI64_RS08510 PF00460 Flagella basal body rod protein LI64_RS08510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI64_RS08515 PF00460 Flagella basal body rod protein LI64_RS08515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI64_RS08520 PF00460 Flagella basal body rod protein LI64_RS08520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI64_RS08525 PF02107 Flagellar L-ring protein LI64_RS08530 PF02119 Flagellar P-ring protein LI64_RS08535 PF10135 Rod binding protein LI64_RS08535 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LI64_RS08540 PF00460 Flagella basal body rod protein LI64_RS08540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI64_RS08545 PF00669 Bacterial flagellin N-terminal helical region LI64_RS08550 PF07690 Major Facilitator Superfamily LI64_RS08555 PF03466 LysR substrate binding domain LI64_RS08555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS08560 PF10150 Ribonuclease E/G family LI64_RS08560 PF12111 Polyribonucleotide phosphorylase C terminal LI64_RS08560 PF00575 S1 RNA binding domain LI64_RS08565 PF01479 S4 domain LI64_RS08565 PF00849 RNA pseudouridylate synthase LI64_RS08570 PF02545 Maf-like protein LI64_RS08575 PF02620 Large ribosomal RNA subunit accumulation protein YceD LI64_RS08580 PF01783 Ribosomal L32p protein family LI64_RS08585 PF02504 Fatty acid synthesis protein LI64_RS08590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LI64_RS08590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LI64_RS08595 PF00698 Acyl transferase domain LI64_RS08605 PF00550 Phosphopantetheine attachment site LI64_RS08610 PF02801 Beta-ketoacyl synthase, C-terminal domain LI64_RS08610 PF00109 Beta-ketoacyl synthase, N-terminal domain LI64_RS08615 PF01063 Amino-transferase class IV LI64_RS08620 PF02618 YceG-like family LI64_RS08625 PF02223 Thymidylate kinase LI64_RS08630 PF09115 DNA polymerase III, delta subunit, C terminal LI64_RS08635 PF01026 TatD related DNase LI64_RS08640 PF00367 phosphotransferase system, EIIB LI64_RS08640 PF02378 Phosphotransferase system, EIIC LI64_RS08645 PF07715 TonB-dependent Receptor Plug Domain LI64_RS08645 PF00593 TonB dependent receptor LI64_RS08650 PF01230 HIT domain LI64_RS08655 PF07233 Protein of unknown function (DUF1425) LI64_RS08660 PF13036 Peptidoglycan-synthase activator LpoB LI64_RS08665 PF01636 Phosphotransferase enzyme family LI64_RS08670 PF00933 Glycosyl hydrolase family 3 N terminal domain LI64_RS08675 PF05728 Uncharacterised protein family (UPF0227) LI64_RS08680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS08685 PF05433 Glycine zipper 2TM domain LI64_RS08690 PF00440 Bacterial regulatory proteins, tetR family LI64_RS08695 PF07338 Protein of unknown function (DUF1471) LI64_RS08700 PF03734 L,D-transpeptidase catalytic domain LI64_RS08700 PF01476 LysM domain LI64_RS08700 PF17969 L,D-transpeptidase C-terminal domain LI64_RS08705 PF02559 CarD-like/TRCF domain LI64_RS08705 PF17757 UvrB interaction domain LI64_RS08705 PF00270 DEAD/DEAH box helicase LI64_RS08705 PF00271 Helicase conserved C-terminal domain LI64_RS08705 PF03461 TRCF domain LI64_RS08710 PF01757 Acyltransferase family LI64_RS08715 PF12704 MacB-like periplasmic core domain LI64_RS08715 PF02687 FtsX-like permease family LI64_RS08720 PF00005 ABC transporter LI64_RS08725 PF02687 FtsX-like permease family LI64_RS08725 PF12704 MacB-like periplasmic core domain LI64_RS08730 PF00480 ROK family LI64_RS08735 PF02146 Sir2 family LI64_RS08740 PF13416 Bacterial extracellular solute-binding protein LI64_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS08750 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS08755 PF00005 ABC transporter LI64_RS08755 PF08402 TOBE domain LI64_RS08765 PF07687 Peptidase dimerisation domain LI64_RS08765 PF01546 Peptidase family M20/M25/M40 LI64_RS08775 PF08007 Cupin superfamily protein LI64_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS08780 PF08918 PhoQ Sensor LI64_RS08785 PF00072 Response regulator receiver domain LI64_RS08785 PF00486 Transcriptional regulatory protein, C terminal LI64_RS08795 PF00206 Lyase LI64_RS08795 PF08328 Adenylosuccinate lyase C-terminal LI64_RS08800 PF04356 Protein of unknown function (DUF489) LI64_RS08810 PF00293 NUDIX domain LI64_RS08815 PF00849 RNA pseudouridylate synthase LI64_RS08820 PF00180 Isocitrate/isopropylmalate dehydrogenase LI64_RS08825 PF10820 Protein of unknown function (DUF2543) LI64_RS08830 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS08830 PF00563 EAL domain LI64_RS08835 PF04226 Transglycosylase associated protein LI64_RS08845 PF13185 GAF domain LI64_RS08845 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS08850 PF03891 Domain of unknown function (DUF333) LI64_RS08860 PF04343 Protein of unknown function, DUF488 LI64_RS08865 PF06418 CTP synthase N-terminus LI64_RS08865 PF00117 Glutamine amidotransferase class-I LI64_RS08870 PF07690 Major Facilitator Superfamily LI64_RS08875 PF02311 AraC-like ligand binding domain LI64_RS08875 PF12833 Helix-turn-helix domain LI64_RS08895 PF04073 Aminoacyl-tRNA editing domain LI64_RS08900 PF04285 Protein of unknown function (DUF444) LI64_RS08905 PF06798 PrkA serine protein kinase C-terminal domain LI64_RS08905 PF08298 PrkA AAA domain LI64_RS08910 PF06629 MltA-interacting protein MipA LI64_RS08915 PF01263 Aldose 1-epimerase LI64_RS08920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI64_RS08920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI64_RS08925 PF01641 SelR domain LI64_RS08930 PF07023 Protein of unknown function (DUF1315) LI64_RS08935 PF00704 Glycosyl hydrolases family 18 LI64_RS08935 PF00041 Fibronectin type III domain LI64_RS08940 PF00857 Isochorismatase family LI64_RS08945 PF00710 Asparaginase, N-terminal LI64_RS08945 PF17763 Glutaminase/Asparaginase C-terminal domain LI64_RS08950 PF01343 Peptidase family S49 LI64_RS08955 PF00881 Nitroreductase family LI64_RS08960 PF00586 AIR synthase related protein, N-terminal domain LI64_RS08960 PF02769 AIR synthase related protein, C-terminal domain LI64_RS08965 PF01131 DNA topoisomerase LI64_RS08965 PF01751 Toprim domain LI64_RS08970 PF00144 Beta-lactamase LI64_RS08975 PF04055 Radical SAM superfamily LI64_RS08975 PF13186 Iron-sulfur cluster-binding domain LI64_RS08980 PF00367 phosphotransferase system, EIIB LI64_RS08980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS08980 PF02378 Phosphotransferase system, EIIC LI64_RS08985 PF00884 Sulfatase LI64_RS08985 PF16347 Domain of unknown function (DUF4976) LI64_RS08995 PF01418 Helix-turn-helix domain, rpiR family LI64_RS08995 PF01380 SIS domain LI64_RS09000 PF02656 Domain of unknown function (DUF202) LI64_RS09010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LI64_RS09010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LI64_RS09015 PF07383 Protein of unknown function (DUF1496) LI64_RS09020 PF00293 NUDIX domain LI64_RS09025 PF02627 Carboxymuconolactone decarboxylase family LI64_RS09030 PF01066 CDP-alcohol phosphatidyltransferase LI64_RS09035 PF00581 Rhodanese-like domain LI64_RS09040 PF00005 ABC transporter LI64_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS09050 PF13416 Bacterial extracellular solute-binding protein LI64_RS09060 PF03372 Endonuclease/Exonuclease/phosphatase family LI64_RS09065 PF00202 Aminotransferase class-III LI64_RS09070 PF04958 Arginine N-succinyltransferase beta subunit LI64_RS09075 PF00171 Aldehyde dehydrogenase family LI64_RS09080 PF04996 Succinylarginine dihydrolase LI64_RS09085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LI64_RS09090 PF07813 LTXXQ motif family protein LI64_RS09095 PF05962 HutD LI64_RS09105 PF02540 NAD synthase LI64_RS09110 PF04355 SmpA / OmlA family LI64_RS09115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS09120 PF02378 Phosphotransferase system, EIIC LI64_RS09125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI64_RS09130 PF12833 Helix-turn-helix domain LI64_RS09130 PF07883 Cupin domain LI64_RS09135 PF02056 Family 4 glycosyl hydrolase LI64_RS09135 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI64_RS09140 PF04794 YdjC-like protein LI64_RS09145 PF00199 Catalase LI64_RS09145 PF06628 Catalase-related immune-responsive LI64_RS09145 PF18011 C-terminal domain found in long catalases LI64_RS09150 PF10729 Cell division activator CedA LI64_RS09155 PF00375 Sodium:dicarboxylate symporter family LI64_RS09160 PF04307 LexA-binding, inner membrane-associated putative hydrolase LI64_RS09170 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS09175 PF14002 YniB-like protein LI64_RS09180 PF03881 Fructosamine kinase LI64_RS09185 PF11080 Endoribonuclease GhoS LI64_RS09190 PF00294 pfkB family carbohydrate kinase LI64_RS09195 PF04338 Protein of unknown function, DUF481 LI64_RS09205 PF03129 Anticodon binding domain LI64_RS09205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI64_RS09205 PF02824 TGS domain LI64_RS09205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI64_RS09210 PF00707 Translation initiation factor IF-3, C-terminal domain LI64_RS09210 PF05198 Translation initiation factor IF-3, N-terminal domain LI64_RS09215 PF01632 Ribosomal protein L35 LI64_RS09220 PF00453 Ribosomal protein L20 LI64_RS09225 PF01409 tRNA synthetases class II core domain (F) LI64_RS09225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LI64_RS09230 PF03484 tRNA synthetase B5 domain LI64_RS09230 PF03147 Ferredoxin-fold anticodon binding domain LI64_RS09230 PF03483 B3/4 domain LI64_RS09230 PF01588 Putative tRNA binding domain LI64_RS09230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LI64_RS09235 PF00216 Bacterial DNA-binding protein LI64_RS09240 PF01032 FecCD transport family LI64_RS09245 PF00255 Glutathione peroxidase LI64_RS09250 PF00005 ABC transporter LI64_RS09255 PF00877 NlpC/P60 family LI64_RS09260 PF00563 EAL domain LI64_RS09265 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LI64_RS09270 PF00005 ABC transporter LI64_RS09275 PF01032 FecCD transport family LI64_RS09280 PF01497 Periplasmic binding protein LI64_RS09285 PF05171 Haemin-degrading HemS.ChuX domain LI64_RS09290 PF07715 TonB-dependent Receptor Plug Domain LI64_RS09290 PF00593 TonB dependent receptor LI64_RS09295 PF10636 Hemin uptake protein hemP LI64_RS09300 PF00793 DAHP synthetase I family LI64_RS09305 PF03618 Kinase/pyrophosphorylase LI64_RS09310 PF00391 PEP-utilising enzyme, mobile domain LI64_RS09310 PF02896 PEP-utilising enzyme, TIM barrel domain LI64_RS09310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LI64_RS09320 PF00933 Glycosyl hydrolase family 3 N terminal domain LI64_RS09320 PF14310 Fibronectin type III-like domain LI64_RS09320 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI64_RS09325 PF01594 AI-2E family transporter LI64_RS09330 PF02913 FAD linked oxidases, C-terminal domain LI64_RS09330 PF13183 4Fe-4S dicluster domain LI64_RS09330 PF01565 FAD binding domain LI64_RS09335 PF03061 Thioesterase superfamily LI64_RS09340 PF15930 Domain of unknown function LI64_RS09345 PF15977 Winged helix-turn-helix DNA binding LI64_RS09350 PF15977 Winged helix-turn-helix DNA binding LI64_RS09360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS09360 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS09365 PF00577 Outer membrane usher protein LI64_RS09365 PF13954 PapC N-terminal domain LI64_RS09365 PF13953 PapC C-terminal domain LI64_RS09385 PF10798 Biofilm development protein YmgB/AriR LI64_RS09395 PF10798 Biofilm development protein YmgB/AriR LI64_RS09400 PF04940 Sensors of blue-light using FAD LI64_RS09400 PF00563 EAL domain LI64_RS09405 PF13411 MerR HTH family regulatory protein LI64_RS09410 PF01521 Iron-sulphur cluster biosynthesis LI64_RS09415 PF01458 Uncharacterized protein family (UPF0051) LI64_RS09420 PF00005 ABC transporter LI64_RS09425 PF01458 Uncharacterized protein family (UPF0051) LI64_RS09430 PF00266 Aminotransferase class-V LI64_RS09435 PF02657 Fe-S metabolism associated domain LI64_RS09440 PF03734 L,D-transpeptidase catalytic domain LI64_RS09440 PF17969 L,D-transpeptidase C-terminal domain LI64_RS09440 PF01476 LysM domain LI64_RS09445 PF04728 Lipoprotein leucine-zipper LI64_RS09450 PF02887 Pyruvate kinase, alpha/beta domain LI64_RS09450 PF00224 Pyruvate kinase, barrel domain LI64_RS09455 PF00005 ABC transporter LI64_RS09455 PF09383 NIL domain LI64_RS09460 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS09465 PF03180 NLPA lipoprotein LI64_RS09470 PF10965 Protein of unknown function (DUF2767) LI64_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS09485 PF00005 ABC transporter LI64_RS09490 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS09515 PF00484 Carbonic anhydrase LI64_RS09520 PF13454 FAD-NAD(P)-binding LI64_RS09555 PF01554 MatE LI64_RS09560 PF00677 Lumazine binding domain LI64_RS09570 PF07690 Major Facilitator Superfamily LI64_RS09575 PF03466 LysR substrate binding domain LI64_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS09580 PF00356 Bacterial regulatory proteins, lacI family LI64_RS09590 PF07690 Major Facilitator Superfamily LI64_RS09595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI64_RS09595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI64_RS09600 PF00877 NlpC/P60 family LI64_RS09605 PF00462 Glutaredoxin LI64_RS09610 PF00929 Exonuclease LI64_RS09615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI64_RS09620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI64_RS09625 PF00440 Bacterial regulatory proteins, tetR family LI64_RS09625 PF16925 Tetracyclin repressor-like, C-terminal domain LI64_RS09630 PF00884 Sulfatase LI64_RS09630 PF08019 Phosphoethanolamine transferase EptA/EptB LI64_RS09635 PF06945 Protein of unknown function (DUF1289) LI64_RS09640 PF00248 Aldo/keto reductase family LI64_RS09645 PF00080 Copper/zinc superoxide dismutase (SODC) LI64_RS09650 PF04632 Fusaric acid resistance protein family LI64_RS09655 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS09655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS09660 PF07869 Protein of unknown function (DUF1656) LI64_RS09665 PF01047 MarR family LI64_RS09670 PF17158 Membrane-associated sensor, integral membrane domain LI64_RS09670 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS09675 PF05433 Glycine zipper 2TM domain LI64_RS09680 PF03702 Anhydro-N-acetylmuramic acid kinase LI64_RS09685 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LI64_RS09690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LI64_RS09690 PF01243 Pyridoxamine 5'-phosphate oxidase LI64_RS09695 PF00579 tRNA synthetases class I (W and Y) LI64_RS09695 PF01479 S4 domain LI64_RS09700 PF08543 Phosphomethylpyrimidine kinase LI64_RS09705 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS09705 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS09710 PF00854 POT family LI64_RS09715 PF10576 Iron-sulfur binding domain of endonuclease III LI64_RS09715 PF00730 HhH-GPD superfamily base excision DNA repair protein LI64_RS09715 PF00633 Helix-hairpin-helix motif LI64_RS09720 PF02508 Rnf-Nqr subunit, membrane protein LI64_RS09725 PF04205 FMN-binding domain LI64_RS09730 PF03116 NQR2, RnfD, RnfE family LI64_RS09735 PF10531 SLBB domain LI64_RS09735 PF12838 4Fe-4S dicluster domain LI64_RS09735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI64_RS09735 PF13375 RnfC Barrel sandwich hybrid domain LI64_RS09740 PF04060 Putative Fe-S cluster LI64_RS09745 PF02508 Rnf-Nqr subunit, membrane protein LI64_RS09750 PF10754 Protein of unknown function (DUF2569) LI64_RS09755 PF05321 Haemolysin expression modulating protein LI64_RS09765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS09765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI64_RS09770 PF00962 Adenosine/AMP deaminase LI64_RS09775 PF00155 Aminotransferase class I and II LI64_RS09780 PF02378 Phosphotransferase system, EIIC LI64_RS09780 PF00367 phosphotransferase system, EIIB LI64_RS09785 PF00356 Bacterial regulatory proteins, lacI family LI64_RS09785 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS09790 PF06097 Bacterial protein of unknown function (DUF945) LI64_RS09795 PF01238 Phosphomannose isomerase type I LI64_RS09800 PF05681 Fumarate hydratase (Fumerase) LI64_RS09800 PF05683 Fumarase C-terminus LI64_RS09805 PF00206 Lyase LI64_RS09805 PF10415 Fumarase C C-terminus LI64_RS09810 PF05472 DNA replication terminus site-binding protein (Ter protein) LI64_RS09815 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS09815 PF00672 HAMP domain LI64_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS09820 PF00582 Universal stress protein family LI64_RS09835 PF13737 Transposase DDE domain LI64_RS09840 PF00313 'Cold-shock' DNA-binding domain LI64_RS09850 PF00486 Transcriptional regulatory protein, C terminal LI64_RS09850 PF00072 Response regulator receiver domain LI64_RS09855 PF06942 GlpM protein LI64_RS09865 PF13520 Amino acid permease LI64_RS09870 PF07338 Protein of unknown function (DUF1471) LI64_RS09875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI64_RS09875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI64_RS09875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LI64_RS09880 PF02233 NAD(P) transhydrogenase beta subunit LI64_RS09885 PF00924 Mechanosensitive ion channel LI64_RS09890 PF00582 Universal stress protein family LI64_RS09895 PF00027 Cyclic nucleotide-binding domain LI64_RS09895 PF13545 Crp-like helix-turn-helix domain LI64_RS09900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI64_RS09900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI64_RS09905 PF03806 AbgT putative transporter family LI64_RS09910 PF01546 Peptidase family M20/M25/M40 LI64_RS09915 PF01546 Peptidase family M20/M25/M40 LI64_RS09915 PF07687 Peptidase dimerisation domain LI64_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS09920 PF03466 LysR substrate binding domain LI64_RS09925 PF01713 Smr domain LI64_RS09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS09930 PF00672 HAMP domain LI64_RS09930 PF02203 Tar ligand binding domain homologue LI64_RS09935 PF00248 Aldo/keto reductase family LI64_RS09945 PF00717 Peptidase S24-like LI64_RS09950 PF01011 PQQ enzyme repeat LI64_RS09950 PF13360 PQQ-like domain LI64_RS09955 PF00675 Insulinase (Peptidase family M16) LI64_RS09960 PF13186 Iron-sulfur cluster-binding domain LI64_RS09960 PF04055 Radical SAM superfamily LI64_RS09965 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LI64_RS09970 PF03070 TENA/THI-4/PQQC family LI64_RS09975 PF12706 Beta-lactamase superfamily domain LI64_RS09980 PF01244 Membrane dipeptidase (Peptidase family M19) LI64_RS09985 PF11798 IMS family HHH motif LI64_RS09985 PF11799 impB/mucB/samB family C-terminal domain LI64_RS09985 PF00817 impB/mucB/samB family LI64_RS09985 PF13438 Domain of unknown function (DUF4113) LI64_RS09990 PF01844 HNH endonuclease LI64_RS09995 PF00296 Luciferase-like monooxygenase LI64_RS10005 PF01594 AI-2E family transporter LI64_RS10010 PF00893 Small Multidrug Resistance protein LI64_RS10015 PF00893 Small Multidrug Resistance protein LI64_RS10020 PF00089 Trypsin LI64_RS10030 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LI64_RS10050 PF07690 Major Facilitator Superfamily LI64_RS10055 PF03466 LysR substrate binding domain LI64_RS10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS10060 PF00480 ROK family LI64_RS10070 PF00654 Voltage gated chloride channel LI64_RS10085 PF00571 CBS domain LI64_RS10085 PF00005 ABC transporter LI64_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS10095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI64_RS10100 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS10110 PF07690 Major Facilitator Superfamily LI64_RS10115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LI64_RS10120 PF03466 LysR substrate binding domain LI64_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS10125 PF00302 Chloramphenicol acetyltransferase LI64_RS10135 PF07130 YebG protein LI64_RS10140 PF02613 Nitrate reductase delta subunit LI64_RS10145 PF04976 DMSO reductase anchor subunit (DmsC) LI64_RS10155 PF01568 Molydopterin dinucleotide binding domain LI64_RS10155 PF00384 Molybdopterin oxidoreductase LI64_RS10155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS10205 PF00384 Molybdopterin oxidoreductase LI64_RS10205 PF01568 Molydopterin dinucleotide binding domain LI64_RS10205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS10210 PF06649 Protein of unknown function (DUF1161) LI64_RS10220 PF06788 Uncharacterised protein family (UPF0257) LI64_RS10225 PF13302 Acetyltransferase (GNAT) domain LI64_RS10230 PF06932 Protein of unknown function (DUF1283) LI64_RS10235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS10235 PF13378 Enolase C-terminal domain-like LI64_RS10240 PF00107 Zinc-binding dehydrogenase LI64_RS10240 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS10245 PF07690 Major Facilitator Superfamily LI64_RS10245 PF00083 Sugar (and other) transporter LI64_RS10250 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS10250 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS10255 PF14001 YdfZ protein LI64_RS10260 PF00582 Universal stress protein family LI64_RS10265 PF07729 FCD domain LI64_RS10265 PF00392 Bacterial regulatory proteins, gntR family LI64_RS10270 PF00106 short chain dehydrogenase LI64_RS10275 PF01432 Peptidase family M3 LI64_RS10280 PF06183 DinI-like family LI64_RS10295 PF01011 PQQ enzyme repeat LI64_RS10320 PF00072 Response regulator receiver domain LI64_RS10320 PF00486 Transcriptional regulatory protein, C terminal LI64_RS10335 PF15976 CS1-pili formation C-terminal LI64_RS10335 PF16967 E-set like domain LI64_RS10335 PF17271 TcfC Usher-like barrel domain LI64_RS10345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS10345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI64_RS10350 PF11739 Dicarboxylate transport LI64_RS10355 PF13617 YnbE-like lipoprotein LI64_RS10360 PF07027 Protein of unknown function (DUF1318) LI64_RS10365 PF12833 Helix-turn-helix domain LI64_RS10365 PF14525 AraC-binding-like domain LI64_RS10370 PF00171 Aldehyde dehydrogenase family LI64_RS10375 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS10375 PF01590 GAF domain LI64_RS10375 PF00563 EAL domain LI64_RS10375 PF00360 Phytochrome region LI64_RS10380 PF02728 Copper amine oxidase, N3 domain LI64_RS10380 PF07833 Copper amine oxidase N-terminal domain LI64_RS10380 PF02727 Copper amine oxidase, N2 domain LI64_RS10380 PF01179 Copper amine oxidase, enzyme domain LI64_RS10385 PF00171 Aldehyde dehydrogenase family LI64_RS10385 PF01575 MaoC like domain LI64_RS10390 PF05138 Phenylacetic acid catabolic protein LI64_RS10395 PF06243 Phenylacetic acid degradation B LI64_RS10400 PF05138 Phenylacetic acid catabolic protein LI64_RS10405 PF01883 Iron-sulfur cluster assembly protein LI64_RS10410 PF00970 Oxidoreductase FAD-binding domain LI64_RS10410 PF00175 Oxidoreductase NAD-binding domain LI64_RS10410 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS10415 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS10420 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS10425 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LI64_RS10425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI64_RS10425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI64_RS10430 PF03061 Thioesterase superfamily LI64_RS10435 PF00108 Thiolase, N-terminal domain LI64_RS10435 PF02803 Thiolase, C-terminal domain LI64_RS10440 PF00501 AMP-binding enzyme LI64_RS10440 PF14535 AMP-binding enzyme C-terminal domain LI64_RS10445 PF07848 PaaX-like protein LI64_RS10445 PF08223 PaaX-like protein C-terminal domain LI64_RS10450 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS10455 PF02028 BCCT, betaine/carnitine/choline family transporter LI64_RS10475 PF00106 short chain dehydrogenase LI64_RS10525 PF08267 Cobalamin-independent synthase, N-terminal domain LI64_RS10525 PF01717 Cobalamin-independent synthase, Catalytic domain LI64_RS10535 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LI64_RS10540 PF00849 RNA pseudouridylate synthase LI64_RS10545 PF02525 Flavodoxin-like fold LI64_RS10550 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LI64_RS10550 PF00271 Helicase conserved C-terminal domain LI64_RS10550 PF11898 Domain of unknown function (DUF3418) LI64_RS10550 PF00270 DEAD/DEAH box helicase LI64_RS10550 PF04408 Helicase associated domain (HA2) LI64_RS10555 PF01596 O-methyltransferase LI64_RS10560 PF02321 Outer membrane efflux protein LI64_RS10565 PF13533 Biotin-lipoyl like LI64_RS10575 PF02698 DUF218 domain LI64_RS10580 PF00171 Aldehyde dehydrogenase family LI64_RS10590 PF01292 Prokaryotic cytochrome b561 LI64_RS10595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS10595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI64_RS10600 PF00455 DeoR C terminal sensor domain LI64_RS10600 PF08220 DeoR-like helix-turn-helix domain LI64_RS10615 PF03412 Peptidase C39 family LI64_RS10615 PF00664 ABC transporter transmembrane region LI64_RS10615 PF00005 ABC transporter LI64_RS10635 PF10798 Biofilm development protein YmgB/AriR LI64_RS10645 PF10798 Biofilm development protein YmgB/AriR LI64_RS10655 PF13737 Transposase DDE domain LI64_RS10665 PF00672 HAMP domain LI64_RS10665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS10665 PF02203 Tar ligand binding domain homologue LI64_RS10670 PF01544 CorA-like Mg2+ transporter protein LI64_RS10675 PF03880 DbpA RNA binding domain LI64_RS10675 PF00270 DEAD/DEAH box helicase LI64_RS10675 PF00271 Helicase conserved C-terminal domain LI64_RS10680 PF01171 PP-loop family LI64_RS10685 PF12167 Arm DNA-binding domain LI64_RS10685 PF00589 Phage integrase family LI64_RS10700 PF00267 Gram-negative porin LI64_RS10705 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LI64_RS10705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS10705 PF10371 Domain of unknown function LI64_RS10705 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LI64_RS10705 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LI64_RS10710 PF03891 Domain of unknown function (DUF333) LI64_RS10715 PF03724 META domain LI64_RS10725 PF02322 Cytochrome bd terminal oxidase subunit II LI64_RS10730 PF01654 Cytochrome bd terminal oxidase subunit I LI64_RS10740 PF00155 Aminotransferase class I and II LI64_RS10740 PF00392 Bacterial regulatory proteins, gntR family LI64_RS10745 PF00171 Aldehyde dehydrogenase family LI64_RS10750 PF08956 Domain of unknown function (DUF1869) LI64_RS10755 PF09313 Domain of unknown function (DUF1971) LI64_RS10760 PF09313 Domain of unknown function (DUF1971) LI64_RS10765 PF10753 Toxin GhoT_OrtT LI64_RS10770 PF12146 Serine aminopeptidase, S33 LI64_RS10790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS10795 PF10735 Protein of unknown function (DUF2526) LI64_RS10800 PF04657 Putative inner membrane exporter, YdcZ LI64_RS10805 PF00583 Acetyltransferase (GNAT) family LI64_RS10810 PF08671 Anti-repressor SinI LI64_RS10810 PF01381 Helix-turn-helix LI64_RS10815 PF16884 N-terminal domain of oxidoreductase LI64_RS10815 PF00107 Zinc-binding dehydrogenase LI64_RS10820 PF00392 Bacterial regulatory proteins, gntR family LI64_RS10820 PF07729 FCD domain LI64_RS10825 PF00593 TonB dependent receptor LI64_RS10825 PF07715 TonB-dependent Receptor Plug Domain LI64_RS10835 PF00324 Amino acid permease LI64_RS10845 PF01202 Shikimate kinase LI64_RS10850 PF00296 Luciferase-like monooxygenase LI64_RS10855 PF07687 Peptidase dimerisation domain LI64_RS10855 PF01546 Peptidase family M20/M25/M40 LI64_RS10860 PF00296 Luciferase-like monooxygenase LI64_RS10865 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS10865 PF01464 Transglycosylase SLT domain LI64_RS10875 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS10880 PF00005 ABC transporter LI64_RS10890 PF13417 Glutathione S-transferase, N-terminal domain LI64_RS10895 PF01361 Tautomerase enzyme LI64_RS10900 PF03279 Bacterial lipid A biosynthesis acyltransferase LI64_RS10910 PF01022 Bacterial regulatory protein, arsR family LI64_RS10915 PF03144 Elongation factor Tu domain 2 LI64_RS10915 PF00009 Elongation factor Tu GTP binding domain LI64_RS10915 PF14492 Elongation Factor G, domain II LI64_RS10915 PF03764 Elongation factor G, domain IV LI64_RS10915 PF00679 Elongation factor G C-terminus LI64_RS10930 PF01613 Flavin reductase like domain LI64_RS10935 PF00797 N-acetyltransferase LI64_RS10940 PF02665 Nitrate reductase gamma subunit LI64_RS10945 PF02613 Nitrate reductase delta subunit LI64_RS10950 PF14711 Respiratory nitrate reductase beta C-terminal LI64_RS10950 PF13247 4Fe-4S dicluster domain LI64_RS10955 PF14710 Respiratory nitrate reductase alpha N-terminal LI64_RS10955 PF00384 Molybdopterin oxidoreductase LI64_RS10955 PF01568 Molydopterin dinucleotide binding domain LI64_RS10970 PF07690 Major Facilitator Superfamily LI64_RS10975 PF00267 Gram-negative porin LI64_RS10980 PF00892 EamA-like transporter family LI64_RS10985 PF00384 Molybdopterin oxidoreductase LI64_RS10985 PF01568 Molydopterin dinucleotide binding domain LI64_RS10985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS10990 PF00384 Molybdopterin oxidoreductase LI64_RS10990 PF01568 Molydopterin dinucleotide binding domain LI64_RS10990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS10995 PF09163 Formate dehydrogenase N, transmembrane LI64_RS10995 PF12800 4Fe-4S binding domain LI64_RS10995 PF13247 4Fe-4S dicluster domain LI64_RS11000 PF01292 Prokaryotic cytochrome b561 LI64_RS11005 PF03976 Polyphosphate kinase 2 (PPK2) LI64_RS11010 PF07690 Major Facilitator Superfamily LI64_RS11015 PF00107 Zinc-binding dehydrogenase LI64_RS11015 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS11020 PF00005 ABC transporter LI64_RS11020 PF12848 ABC transporter LI64_RS11025 PF00390 Malic enzyme, N-terminal domain LI64_RS11025 PF03949 Malic enzyme, NAD binding domain LI64_RS11030 PF08136 30S ribosomal protein subunit S22 family LI64_RS11035 PF10684 Putative biofilm-dependent modulation protein LI64_RS11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11050 PF03466 LysR substrate binding domain LI64_RS11055 PF02566 OsmC-like protein LI64_RS11060 PF03466 LysR substrate binding domain LI64_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS11070 PF00005 ABC transporter LI64_RS11075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS11075 PF00005 ABC transporter LI64_RS11080 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS11080 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11085 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS11095 PF01427 D-ala-D-ala dipeptidase LI64_RS11100 PF01418 Helix-turn-helix domain, rpiR family LI64_RS11100 PF01380 SIS domain LI64_RS11105 PF12146 Serine aminopeptidase, S33 LI64_RS11110 PF04940 Sensors of blue-light using FAD LI64_RS11110 PF00563 EAL domain LI64_RS11115 PF00294 pfkB family carbohydrate kinase LI64_RS11120 PF11471 Maltoporin periplasmic N-terminal extension LI64_RS11120 PF02264 LamB porin LI64_RS11125 PF02378 Phosphotransferase system, EIIC LI64_RS11125 PF00367 phosphotransferase system, EIIB LI64_RS11130 PF08244 Glycosyl hydrolases family 32 C terminal LI64_RS11130 PF00251 Glycosyl hydrolases family 32 N-terminal domain LI64_RS11135 PF13407 Periplasmic binding protein domain LI64_RS11135 PF00356 Bacterial regulatory proteins, lacI family LI64_RS11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS11140 PF00672 HAMP domain LI64_RS11140 PF02203 Tar ligand binding domain homologue LI64_RS11155 PF13098 Thioredoxin-like domain LI64_RS11160 PF02638 Glycosyl hydrolase-like 10 LI64_RS11165 PF09905 DNA-binding protein VF530 LI64_RS11170 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI64_RS11175 PF03466 LysR substrate binding domain LI64_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11195 PF11941 Domain of unknown function (DUF3459) LI64_RS11195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI64_RS11195 PF00128 Alpha amylase, catalytic domain LI64_RS11200 PF00128 Alpha amylase, catalytic domain LI64_RS11205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI64_RS11205 PF00128 Alpha amylase, catalytic domain LI64_RS11230 PF07690 Major Facilitator Superfamily LI64_RS11235 PF03466 LysR substrate binding domain LI64_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11275 PF01882 Protein of unknown function DUF58 LI64_RS11280 PF07726 ATPase family associated with various cellular activities (AAA) LI64_RS11280 PF17863 AAA lid domain LI64_RS11285 PF04055 Radical SAM superfamily LI64_RS11285 PF13186 Iron-sulfur cluster-binding domain LI64_RS11290 PF00884 Sulfatase LI64_RS11295 PF13737 Transposase DDE domain LI64_RS11305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LI64_RS11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11320 PF03466 LysR substrate binding domain LI64_RS11330 PF17755 UvrA DNA-binding domain LI64_RS11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11335 PF03466 LysR substrate binding domain LI64_RS11340 PF00893 Small Multidrug Resistance protein LI64_RS11360 PF01048 Phosphorylase superfamily LI64_RS11400 PF05598 Transposase domain (DUF772) LI64_RS11400 PF01609 Transposase DDE domain LI64_RS11430 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS11435 PF00295 Glycosyl hydrolases family 28 LI64_RS11440 PF08220 DeoR-like helix-turn-helix domain LI64_RS11440 PF00455 DeoR C terminal sensor domain LI64_RS11445 PF00293 NUDIX domain LI64_RS11455 PF00578 AhpC/TSA family LI64_RS11455 PF02683 Cytochrome C biogenesis protein transmembrane region LI64_RS11455 PF17991 Thioredoxin like C-terminal domain LI64_RS11460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS11460 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS11460 PF00672 HAMP domain LI64_RS11465 PF00072 Response regulator receiver domain LI64_RS11465 PF00486 Transcriptional regulatory protein, C terminal LI64_RS11470 PF00561 alpha/beta hydrolase fold LI64_RS11495 PF01062 Bestrophin, RFP-TM, chloride channel LI64_RS11500 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS11500 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS11510 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS11510 PF05230 MASE2 domain LI64_RS11515 PF13811 Domain of unknown function (DUF4186) LI64_RS11520 PF04960 Glutaminase LI64_RS11525 PF00672 HAMP domain LI64_RS11525 PF02203 Tar ligand binding domain homologue LI64_RS11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS11530 PF00171 Aldehyde dehydrogenase family LI64_RS11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11535 PF03466 LysR substrate binding domain LI64_RS11540 PF02567 Phenazine biosynthesis-like protein LI64_RS11545 PF02567 Phenazine biosynthesis-like protein LI64_RS11550 PF07690 Major Facilitator Superfamily LI64_RS11555 PF01914 MarC family integral membrane protein LI64_RS11560 PF01047 MarR family LI64_RS11565 PF12833 Helix-turn-helix domain LI64_RS11570 PF13999 MarB protein LI64_RS11575 PF00892 EamA-like transporter family LI64_RS11580 PF07690 Major Facilitator Superfamily LI64_RS11585 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LI64_RS11590 PF00005 ABC transporter LI64_RS11595 PF00005 ABC transporter LI64_RS11600 PF02653 Branched-chain amino acid transport system / permease component LI64_RS11605 PF02653 Branched-chain amino acid transport system / permease component LI64_RS11610 PF02954 Bacterial regulatory protein, Fis family LI64_RS11610 PF00158 Sigma-54 interaction domain LI64_RS11610 PF13188 PAS domain LI64_RS11615 PF01717 Cobalamin-independent synthase, Catalytic domain LI64_RS11625 PF01965 DJ-1/PfpI family LI64_RS11635 PF10829 Protein of unknown function (DUF2554) LI64_RS11640 PF01136 Peptidase family U32 LI64_RS11640 PF12392 Collagenase LI64_RS11645 PF07883 Cupin domain LI64_RS11645 PF01381 Helix-turn-helix LI64_RS11650 PF03594 Benzoate membrane transport protein LI64_RS11665 PF11769 Protein of unknown function (DUF3313) LI64_RS11670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS11675 PF07687 Peptidase dimerisation domain LI64_RS11675 PF01546 Peptidase family M20/M25/M40 LI64_RS11680 PF03848 Tellurite resistance protein TehB LI64_RS11685 PF03595 Voltage-dependent anion channel LI64_RS11690 PF18836 Beta solenoid repeat from YDCK LI64_RS11695 PF13302 Acetyltransferase (GNAT) domain LI64_RS11700 PF04349 Periplasmic glucan biosynthesis protein, MdoG LI64_RS11705 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS11710 PF00155 Aminotransferase class I and II LI64_RS11715 PF03466 LysR substrate binding domain LI64_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11720 PF00135 Carboxylesterase family LI64_RS11725 PF07063 Domain of unknown function (DUF1338) LI64_RS11730 PF03466 LysR substrate binding domain LI64_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS11735 PF02203 Tar ligand binding domain homologue LI64_RS11735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS11735 PF00672 HAMP domain LI64_RS11740 PF00107 Zinc-binding dehydrogenase LI64_RS11740 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS11745 PF02583 Metal-sensitive transcriptional repressor LI64_RS11765 PF13737 Transposase DDE domain LI64_RS11785 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LI64_RS11795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS11800 PF00246 Zinc carboxypeptidase LI64_RS11805 PF13378 Enolase C-terminal domain-like LI64_RS11805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS11810 PF08534 Redoxin LI64_RS11815 PF00158 Sigma-54 interaction domain LI64_RS11815 PF18024 Helix-turn-helix domain LI64_RS11820 PF05128 Domain of unknown function (DUF697) LI64_RS11825 PF04317 YcjX-like family, DUF463 LI64_RS11830 PF00356 Bacterial regulatory proteins, lacI family LI64_RS11830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS11835 PF09381 Outer membrane protein G (OmpG) LI64_RS11840 PF00005 ABC transporter LI64_RS11840 PF03459 TOBE domain LI64_RS11840 PF17912 MalK OB fold domain LI64_RS11845 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS11850 PF03633 Glycosyl hydrolase family 65, C-terminal domain LI64_RS11850 PF03636 Glycosyl hydrolase family 65, N-terminal domain LI64_RS11850 PF03632 Glycosyl hydrolase family 65 central catalytic domain LI64_RS11855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS11855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI64_RS11860 PF01261 Xylose isomerase-like TIM barrel LI64_RS11865 PF00107 Zinc-binding dehydrogenase LI64_RS11870 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11875 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11880 PF01547 Bacterial extracellular solute-binding protein LI64_RS11885 PF00128 Alpha amylase, catalytic domain LI64_RS11890 PF09584 Phage shock protein PspD (Phageshock_PspD) LI64_RS11895 PF04024 PspC domain LI64_RS11900 PF06667 Phage shock protein B LI64_RS11905 PF04012 PspA/IM30 family LI64_RS11910 PF02954 Bacterial regulatory protein, Fis family LI64_RS11910 PF00158 Sigma-54 interaction domain LI64_RS11915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS11920 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11925 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS11925 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS11930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS11930 PF00005 ABC transporter LI64_RS11935 PF00005 ABC transporter LI64_RS11940 PF00440 Bacterial regulatory proteins, tetR family LI64_RS11945 PF01042 Endoribonuclease L-PSP LI64_RS11960 PF00575 S1 RNA binding domain LI64_RS11960 PF08206 Ribonuclease B OB domain LI64_RS11960 PF17876 Cold shock domain LI64_RS11960 PF00773 RNB domain LI64_RS11965 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS11965 PF00563 EAL domain LI64_RS11965 PF13426 PAS domain LI64_RS11970 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS11980 PF08220 DeoR-like helix-turn-helix domain LI64_RS11980 PF00455 DeoR C terminal sensor domain LI64_RS11985 PF05433 Glycine zipper 2TM domain LI64_RS11990 PF01253 Translation initiation factor SUI1 LI64_RS11995 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI64_RS12000 PF18073 Rubredoxin metal binding domain LI64_RS12005 PF06305 Lipopolysaccharide assembly protein A domain LI64_RS12010 PF01569 PAP2 superfamily LI64_RS12015 PF00925 GTP cyclohydrolase II LI64_RS12020 PF00330 Aconitase family (aconitate hydratase) LI64_RS12020 PF00694 Aconitase C-terminal domain LI64_RS12040 PF03466 LysR substrate binding domain LI64_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS12045 PF01751 Toprim domain LI64_RS12045 PF01396 Topoisomerase DNA binding C4 zinc finger LI64_RS12045 PF08272 Topoisomerase I zinc-ribbon-like LI64_RS12045 PF01131 DNA topoisomerase LI64_RS12050 PF10692 Protein of unknown function (DUF2498) LI64_RS12055 PF08496 Peptidase family S49 N-terminal LI64_RS12055 PF01343 Peptidase family S49 LI64_RS12060 PF00106 short chain dehydrogenase LI64_RS12065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LI64_RS12065 PF12557 Cob(I)alamin adenosyltransferase N terminal LI64_RS12070 PF00849 RNA pseudouridylate synthase LI64_RS12070 PF01479 S4 domain LI64_RS12075 PF01300 Telomere recombination LI64_RS12080 PF02811 PHP domain LI64_RS12085 PF00425 chorismate binding enzyme LI64_RS12085 PF04715 Anthranilate synthase component I, N terminal region LI64_RS12090 PF00117 Glutamine amidotransferase class-I LI64_RS12090 PF02885 Glycosyl transferase family, helical bundle domain LI64_RS12090 PF00591 Glycosyl transferase family, a/b domain LI64_RS12095 PF00218 Indole-3-glycerol phosphate synthase LI64_RS12095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LI64_RS12100 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS12105 PF00290 Tryptophan synthase alpha chain LI64_RS12110 PF04143 Sulphur transport LI64_RS12115 PF01206 Sulfurtransferase TusA LI64_RS12125 PF03922 OmpW family LI64_RS12130 PF03692 Putative zinc- or iron-chelating domain LI64_RS12140 PF04279 Intracellular septation protein A LI64_RS12145 PF07715 TonB-dependent Receptor Plug Domain LI64_RS12145 PF00593 TonB dependent receptor LI64_RS12150 PF03061 Thioesterase superfamily LI64_RS12155 PF03544 Gram-negative bacterial TonB protein C-terminal LI64_RS12160 PF03795 YCII-related domain LI64_RS12165 PF01810 LysE type translocator LI64_RS12175 PF13091 PLD-like domain LI64_RS12175 PF13396 Phospholipase_D-nuclease N-terminal LI64_RS12180 PF04269 Protein of unknown function, DUF440 LI64_RS12185 PF00520 Ion transport protein LI64_RS12185 PF00027 Cyclic nucleotide-binding domain LI64_RS12190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS12190 PF00005 ABC transporter LI64_RS12195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS12195 PF00005 ABC transporter LI64_RS12200 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS12205 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS12210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS12215 PF01914 MarC family integral membrane protein LI64_RS12220 PF00465 Iron-containing alcohol dehydrogenase LI64_RS12220 PF00171 Aldehyde dehydrogenase family LI64_RS12225 PF00265 Thymidine kinase LI64_RS12230 PF00816 H-NS histone family LI64_RS12235 PF00483 Nucleotidyl transferase LI64_RS12240 PF00072 Response regulator receiver domain LI64_RS12245 PF01734 Patatin-like phospholipase LI64_RS12250 PF02810 SEC-C motif LI64_RS12255 PF00551 Formyl transferase LI64_RS12255 PF01842 ACT domain LI64_RS12270 PF02665 Nitrate reductase gamma subunit LI64_RS12275 PF02613 Nitrate reductase delta subunit LI64_RS12280 PF13247 4Fe-4S dicluster domain LI64_RS12280 PF14711 Respiratory nitrate reductase beta C-terminal LI64_RS12285 PF00384 Molybdopterin oxidoreductase LI64_RS12285 PF01568 Molydopterin dinucleotide binding domain LI64_RS12285 PF14710 Respiratory nitrate reductase alpha N-terminal LI64_RS12290 PF07690 Major Facilitator Superfamily LI64_RS12295 PF07730 Histidine kinase LI64_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS12295 PF00672 HAMP domain LI64_RS12295 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LI64_RS12300 PF00072 Response regulator receiver domain LI64_RS12300 PF00196 Bacterial regulatory proteins, luxR family LI64_RS12305 PF11924 Inverse autotransporter, beta-domain LI64_RS12310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS12310 PF00384 Molybdopterin oxidoreductase LI64_RS12310 PF01568 Molydopterin dinucleotide binding domain LI64_RS12310 PF04324 BFD-like [2Fe-2S] binding domain LI64_RS12315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS12315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI64_RS12315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI64_RS12315 PF13806 Rieske-like [2Fe-2S] domain LI64_RS12315 PF18267 Rubredoxin NAD+ reductase C-terminal domain LI64_RS12315 PF04324 BFD-like [2Fe-2S] binding domain LI64_RS12320 PF00005 ABC transporter LI64_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS12335 PF03861 ANTAR domain LI64_RS12335 PF08376 Nitrate and nitrite sensing LI64_RS12340 PF02635 DsrE/DsrF-like family LI64_RS12345 PF00672 HAMP domain LI64_RS12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS12345 PF02203 Tar ligand binding domain homologue LI64_RS12355 PF04752 ChaC-like protein LI64_RS12360 PF06150 ChaB LI64_RS12365 PF01699 Sodium/calcium exchanger protein LI64_RS12370 PF00793 DAHP synthetase I family LI64_RS12375 PF13369 Transglutaminase-like superfamily LI64_RS12380 PF04247 Invasion gene expression up-regulator, SirB LI64_RS12385 PF13847 Methyltransferase domain LI64_RS12385 PF17827 PrmC N-terminal domain LI64_RS12390 PF00472 RF-1 domain LI64_RS12390 PF03462 PCRF domain LI64_RS12395 PF01488 Shikimate / quinate 5-dehydrogenase LI64_RS12395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LI64_RS12395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LI64_RS12400 PF03550 Outer membrane lipoprotein LolB LI64_RS12405 PF00288 GHMP kinases N terminal domain LI64_RS12405 PF08544 GHMP kinases C terminal LI64_RS12410 PF14572 Phosphoribosyl synthetase-associated domain LI64_RS12410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LI64_RS12415 PF01740 STAS domain LI64_RS12415 PF00916 Sulfate permease family LI64_RS12425 PF10762 Protein of unknown function (DUF2583) LI64_RS12430 PF01195 Peptidyl-tRNA hydrolase LI64_RS12435 PF06071 Protein of unknown function (DUF933) LI64_RS12435 PF01926 50S ribosome-binding GTPase LI64_RS12470 PF13737 Transposase DDE domain LI64_RS12485 PF05593 RHS Repeat LI64_RS12485 PF03527 RHS protein LI64_RS12500 PF04717 Type VI secretion system, phage-baseplate injector LI64_RS12510 PF05488 PAAR motif LI64_RS12510 PF01129 NAD:arginine ADP-ribosyltransferase LI64_RS12535 PF00069 Protein kinase domain LI64_RS12540 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS12540 PF10431 C-terminal, D2-small domain, of ClpB protein LI64_RS12540 PF17871 AAA lid domain LI64_RS12540 PF07724 AAA domain (Cdc48 subfamily) LI64_RS12550 PF05947 Type VI secretion system, TssF LI64_RS12555 PF04965 Gene 25-like lysozyme LI64_RS12600 PF05638 Type VI secretion system effector, Hcp LI64_RS12605 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LI64_RS12610 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LI64_RS12615 PF06812 ImpA, N-terminal, type VI secretion system LI64_RS12625 PF06761 Intracellular multiplication and human macrophage-killing LI64_RS12625 PF14331 ImcF-related N-terminal domain LI64_RS12625 PF06744 Type VI secretion protein IcmF C-terminal LI64_RS12630 PF13677 Membrane MotB of proton-channel complex MotA/MotB LI64_RS12630 PF00691 OmpA family LI64_RS12635 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LI64_RS12650 PF12833 Helix-turn-helix domain LI64_RS12650 PF01965 DJ-1/PfpI family LI64_RS12655 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI64_RS12655 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI64_RS12665 PF01204 Trehalase LI64_RS12670 PF07715 TonB-dependent Receptor Plug Domain LI64_RS12670 PF00593 TonB dependent receptor LI64_RS12675 PF07238 PilZ domain LI64_RS12675 PF07317 Flagellar regulator YcgR LI64_RS12680 PF01464 Transglycosylase SLT domain LI64_RS12685 PF02016 LD-carboxypeptidase N-terminal domain LI64_RS12685 PF17676 LD-carboxypeptidase C-terminal domain LI64_RS12690 PF00999 Sodium/hydrogen exchanger family LI64_RS12690 PF03471 Transporter associated domain LI64_RS12690 PF02080 TrkA-C domain LI64_RS12695 PF01168 Alanine racemase, N-terminal domain LI64_RS12695 PF00842 Alanine racemase, C-terminal domain LI64_RS12700 PF01266 FAD dependent oxidoreductase LI64_RS12710 PF04293 SpoVR like protein LI64_RS12715 PF00392 Bacterial regulatory proteins, gntR family LI64_RS12715 PF07840 FadR C-terminal domain LI64_RS12720 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LI64_RS12725 PF02600 Disulfide bond formation protein DsbB LI64_RS12730 PF03692 Putative zinc- or iron-chelating domain LI64_RS12735 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI64_RS12740 PF05166 YcgL domain LI64_RS12745 PF03775 Septum formation inhibitor MinC, C-terminal domain LI64_RS12745 PF05209 Septum formation inhibitor MinC, N-terminal domain LI64_RS12750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI64_RS12755 PF03776 Septum formation topological specificity factor MinE LI64_RS12760 PF00570 HRDC domain LI64_RS12760 PF01612 3'-5' exonuclease LI64_RS12765 PF00501 AMP-binding enzyme LI64_RS12765 PF13193 AMP-binding enzyme C-terminal domain LI64_RS12770 PF03843 Outer membrane lipoprotein Slp family LI64_RS12775 PF00814 Glycoprotease family LI64_RS12780 PF04851 Type III restriction enzyme, res subunit LI64_RS12780 PF13307 Helicase C-terminal domain LI64_RS12785 PF01042 Endoribonuclease L-PSP LI64_RS12790 PF03701 Uncharacterised protein family (UPF0181) LI64_RS12795 PF04715 Anthranilate synthase component I, N terminal region LI64_RS12795 PF00425 chorismate binding enzyme LI64_RS12800 PF00293 NUDIX domain LI64_RS12805 PF03315 Serine dehydratase beta chain LI64_RS12805 PF03313 Serine dehydratase alpha chain LI64_RS12810 PF12792 CSS motif domain associated with EAL LI64_RS12810 PF00563 EAL domain LI64_RS12815 PF03471 Transporter associated domain LI64_RS12815 PF03741 Integral membrane protein TerC family LI64_RS12820 PF03610 PTS system fructose IIA component LI64_RS12820 PF03830 PTS system sorbose subfamily IIB component LI64_RS12825 PF03609 PTS system sorbose-specific iic component LI64_RS12830 PF03613 PTS system mannose/fructose/sorbose family IID component LI64_RS12835 PF06173 Protein of unknown function (DUF986) LI64_RS12840 PF02659 Putative manganese efflux pump LI64_RS12845 PF13847 Methyltransferase domain LI64_RS12850 PF00905 Penicillin binding protein transpeptidase domain LI64_RS12850 PF03717 Penicillin-binding Protein dimerisation domain LI64_RS12855 PF00313 'Cold-shock' DNA-binding domain LI64_RS12860 PF10736 Protein of unknown function (DUF2627) LI64_RS12865 PF13974 YebO-like protein LI64_RS12870 PF13998 MgrB protein LI64_RS12875 PF13996 YobH-like protein LI64_RS12880 PF09339 IclR helix-turn-helix domain LI64_RS12880 PF01614 Bacterial transcriptional regulator LI64_RS12885 PF07690 Major Facilitator Superfamily LI64_RS12890 PF01435 Peptidase family M48 LI64_RS12895 PF03572 Peptidase family S41 LI64_RS12895 PF11818 C-terminal domain of tail specific protease (DUF3340) LI64_RS12895 PF00595 PDZ domain LI64_RS12895 PF17804 Tail specific protease N-terminal domain LI64_RS12900 PF04352 ProQ/FINO family LI64_RS12900 PF17516 ProQ C-terminal domain LI64_RS12905 PF13185 GAF domain LI64_RS12910 PF04403 Paraquat-inducible protein A LI64_RS12915 PF02470 MlaD protein LI64_RS12920 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LI64_RS12920 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LI64_RS12920 PF01189 16S rRNA methyltransferase RsmB/F LI64_RS12925 PF07351 Protein of unknown function (DUF1480) LI64_RS12930 PF00149 Calcineurin-like phosphoesterase LI64_RS12935 PF04393 Protein of unknown function (DUF535) LI64_RS12945 PF10709 Protein of unknown function (DUF2511) LI64_RS12950 PF05425 Copper resistance protein D LI64_RS12955 PF04234 CopC domain LI64_RS12960 PF06440 DNA polymerase III, theta subunit LI64_RS12965 PF00795 Carbon-nitrogen hydrolase LI64_RS12970 PF00929 Exonuclease LI64_RS12975 PF00326 Prolyl oligopeptidase family LI64_RS12975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LI64_RS12980 PF04391 Protein of unknown function (DUF533) LI64_RS12985 PF02222 ATP-grasp domain LI64_RS13010 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LI64_RS13010 PF13296 Putative type VI secretion system Rhs element Vgr LI64_RS13010 PF04717 Type VI secretion system, phage-baseplate injector LI64_RS13015 PF01081 KDPG and KHG aldolase LI64_RS13020 PF00920 Dehydratase family LI64_RS13025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LI64_RS13025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LI64_RS13030 PF01418 Helix-turn-helix domain, rpiR family LI64_RS13030 PF01380 SIS domain LI64_RS13035 PF02887 Pyruvate kinase, alpha/beta domain LI64_RS13035 PF00224 Pyruvate kinase, barrel domain LI64_RS13040 PF03279 Bacterial lipid A biosynthesis acyltransferase LI64_RS13045 PF01551 Peptidase family M23 LI64_RS13045 PF08525 Opacity-associated protein A N-terminal motif LI64_RS13045 PF01476 LysM domain LI64_RS13050 PF01297 Zinc-uptake complex component A periplasmic LI64_RS13055 PF00005 ABC transporter LI64_RS13060 PF00950 ABC 3 transport family LI64_RS13065 PF17864 RuvB AAA lid domain LI64_RS13065 PF05491 RuvB C-terminal winged helix domain LI64_RS13065 PF05496 Holliday junction DNA helicase RuvB P-loop domain LI64_RS13070 PF07499 RuvA, C-terminal domain LI64_RS13070 PF01330 RuvA N terminal domain LI64_RS13075 PF02075 Crossover junction endodeoxyribonuclease RuvC LI64_RS13080 PF01709 Transcriptional regulator LI64_RS13085 PF00293 NUDIX domain LI64_RS13090 PF02938 GAD domain LI64_RS13090 PF00152 tRNA synthetases class II (D, K and N) LI64_RS13090 PF01336 OB-fold nucleic acid binding domain LI64_RS13095 PF00857 Isochorismatase family LI64_RS13100 PF01904 Protein of unknown function DUF72 LI64_RS13105 PF01124 MAPEG family LI64_RS13110 PF13649 Methyltransferase domain LI64_RS13115 PF08003 Protein of unknown function (DUF1698) LI64_RS13120 PF03932 CutC family LI64_RS13125 PF06185 YecM protein LI64_RS13130 PF03485 Arginyl tRNA synthetase N terminal domain LI64_RS13130 PF05746 DALR anticodon binding domain LI64_RS13130 PF00750 tRNA synthetases class I (R) LI64_RS13135 PF07470 Glycosyl Hydrolase Family 88 LI64_RS13145 PF06366 Flagellar protein FlhE LI64_RS13150 PF00771 FHIPEP family LI64_RS13155 PF01312 FlhB HrpN YscU SpaS Family LI64_RS13160 PF04344 Chemotaxis phosphatase, CheZ LI64_RS13165 PF00072 Response regulator receiver domain LI64_RS13170 PF01339 CheB methylesterase LI64_RS13170 PF00072 Response regulator receiver domain LI64_RS13175 PF01739 CheR methyltransferase, SAM binding domain LI64_RS13175 PF03705 CheR methyltransferase, all-alpha domain LI64_RS13180 PF00672 HAMP domain LI64_RS13180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS13180 PF02203 Tar ligand binding domain homologue LI64_RS13185 PF00672 HAMP domain LI64_RS13185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS13185 PF02203 Tar ligand binding domain homologue LI64_RS13215 PF00375 Sodium:dicarboxylate symporter family LI64_RS13220 PF01584 CheW-like domain LI64_RS13225 PF01627 Hpt domain LI64_RS13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS13225 PF02895 Signal transducing histidine kinase, homodimeric domain LI64_RS13225 PF09078 CheY binding LI64_RS13225 PF01584 CheW-like domain LI64_RS13230 PF00691 OmpA family LI64_RS13230 PF13677 Membrane MotB of proton-channel complex MotA/MotB LI64_RS13235 PF01618 MotA/TolQ/ExbB proton channel family LI64_RS13240 PF05280 Flagellar transcriptional activator (FlhC) LI64_RS13245 PF05247 Flagellar transcriptional activator (FlhD) LI64_RS13250 PF00582 Universal stress protein family LI64_RS13255 PF00982 Glycosyltransferase family 20 LI64_RS13260 PF02358 Trehalose-phosphatase LI64_RS13265 PF02653 Branched-chain amino acid transport system / permease component LI64_RS13270 PF00005 ABC transporter LI64_RS13275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS13285 PF00210 Ferritin-like domain LI64_RS13290 PF03605 Anaerobic c4-dicarboxylate membrane transporter LI64_RS13295 PF10964 Protein of unknown function (DUF2766) LI64_RS13300 PF07690 Major Facilitator Superfamily LI64_RS13315 PF00210 Ferritin-like domain LI64_RS13320 PF03222 Tryptophan/tyrosine permease family LI64_RS13325 PF02810 SEC-C motif LI64_RS13325 PF03695 Uncharacterised protein family (UPF0149) LI64_RS13330 PF13458 Periplasmic binding protein LI64_RS13335 PF02653 Branched-chain amino acid transport system / permease component LI64_RS13340 PF11862 Domain of unknown function (DUF3382) LI64_RS13340 PF02653 Branched-chain amino acid transport system / permease component LI64_RS13345 PF00005 ABC transporter LI64_RS13345 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI64_RS13350 PF00005 ABC transporter LI64_RS13360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13360 PF03466 LysR substrate binding domain LI64_RS13380 PF01066 CDP-alcohol phosphatidyltransferase LI64_RS13385 PF02151 UvrB/uvrC motif LI64_RS13385 PF08459 UvrC Helix-hairpin-helix N-terminal LI64_RS13385 PF01541 GIY-YIG catalytic domain LI64_RS13390 PF00072 Response regulator receiver domain LI64_RS13390 PF00196 Bacterial regulatory proteins, luxR family LI64_RS13395 PF10769 Protein of unknown function (DUF2594) LI64_RS13400 PF00196 Bacterial regulatory proteins, luxR family LI64_RS13400 PF03472 Autoinducer binding domain LI64_RS13405 PF00005 ABC transporter LI64_RS13410 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS13415 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS13420 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS13425 PF02899 Phage integrase, N-terminal SAM-like domain LI64_RS13430 PF04545 Sigma-70, region 4 LI64_RS13430 PF04539 Sigma-70 region 3 LI64_RS13430 PF04542 Sigma-70 region 2 LI64_RS13435 PF00669 Bacterial flagellin N-terminal helical region LI64_RS13435 PF00700 Bacterial flagellin C-terminal helical region LI64_RS13435 PF12445 Flagellin protein LI64_RS13440 PF07195 Flagellar hook-associated protein 2 C-terminus LI64_RS13440 PF02465 Flagellar hook-associated protein 2 N-terminus LI64_RS13445 PF02561 Flagellar protein FliS LI64_RS13450 PF05400 Flagellar protein FliT LI64_RS13455 PF00128 Alpha amylase, catalytic domain LI64_RS13455 PF02806 Alpha amylase, C-terminal all-beta domain LI64_RS13460 PF13987 YedD-like protein LI64_RS13465 PF02049 Flagellar hook-basal body complex protein FliE LI64_RS13470 PF01514 Secretory protein of YscJ/FliF family LI64_RS13470 PF08345 Flagellar M-ring protein C-terminal LI64_RS13475 PF01706 FliG C-terminal domain LI64_RS13475 PF14841 FliG middle domain LI64_RS13475 PF14842 FliG N-terminal domain LI64_RS13480 PF02108 Flagellar assembly protein FliH LI64_RS13485 PF18269 T3SS EscN ATPase C-terminal domain LI64_RS13485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI64_RS13490 PF02050 Flagellar FliJ protein LI64_RS13495 PF02120 Flagellar hook-length control protein FliK LI64_RS13500 PF03748 Flagellar basal body-associated protein FliL LI64_RS13505 PF02154 Flagellar motor switch protein FliM LI64_RS13505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LI64_RS13510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LI64_RS13510 PF16973 Flagellar motor switch protein FliN N-terminal LI64_RS13515 PF04347 Flagellar biosynthesis protein, FliO LI64_RS13520 PF00813 FliP family LI64_RS13525 PF01313 Bacterial export proteins, family 3 LI64_RS13530 PF01311 Bacterial export proteins, family 1 LI64_RS13535 PF00196 Bacterial regulatory proteins, luxR family LI64_RS13540 PF10781 Dextransucrase DSRB LI64_RS13545 PF10733 Protein of unknown function (DUF2525) LI64_RS13555 PF17151 Periplasmic sensor domain LI64_RS13555 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS13560 PF09926 Uncharacterized small protein (DUF2158) LI64_RS13565 PF05661 Protein of unknown function (DUF808) LI64_RS13570 PF00892 EamA-like transporter family LI64_RS13575 PF03852 DNA mismatch endonuclease Vsr LI64_RS13580 PF00145 C-5 cytosine-specific DNA methylase LI64_RS13580 PF18284 DNA methylase N-terminal domain LI64_RS13585 PF01966 HD domain LI64_RS13590 PF13737 Transposase DDE domain LI64_RS13595 PF00267 Gram-negative porin LI64_RS13600 PF13580 SIS domain LI64_RS13605 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LI64_RS13605 PF17203 Single cache domain 3 LI64_RS13605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS13605 PF00989 PAS fold LI64_RS13610 PF00072 Response regulator receiver domain LI64_RS13615 PF02424 ApbE family LI64_RS13620 PF14537 Cytochrome c3 LI64_RS13620 PF00890 FAD binding domain LI64_RS13625 PF00939 Sodium:sulfate symporter transmembrane region LI64_RS13630 PF05683 Fumarase C-terminus LI64_RS13630 PF05681 Fumarate hydratase (Fumerase) LI64_RS13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13635 PF03466 LysR substrate binding domain LI64_RS13640 PF00144 Beta-lactamase LI64_RS13645 PF07690 Major Facilitator Superfamily LI64_RS13655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13655 PF03466 LysR substrate binding domain LI64_RS13660 PF06167 Glucose-regulated metallo-peptidase M90 LI64_RS13670 PF04183 IucA / IucC family LI64_RS13670 PF06276 Ferric iron reductase FhuF-like transporter LI64_RS13680 PF04183 IucA / IucC family LI64_RS13680 PF06276 Ferric iron reductase FhuF-like transporter LI64_RS13685 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LI64_RS13690 PF00593 TonB dependent receptor LI64_RS13690 PF07715 TonB-dependent Receptor Plug Domain LI64_RS13705 PF00149 Calcineurin-like phosphoesterase LI64_RS13705 PF02872 5'-nucleotidase, C-terminal domain LI64_RS13710 PF03466 LysR substrate binding domain LI64_RS13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13715 PF03466 LysR substrate binding domain LI64_RS13725 PF17969 L,D-transpeptidase C-terminal domain LI64_RS13725 PF03734 L,D-transpeptidase catalytic domain LI64_RS13730 PF07690 Major Facilitator Superfamily LI64_RS13730 PF00083 Sugar (and other) transporter LI64_RS13735 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LI64_RS13735 PF01048 Phosphorylase superfamily LI64_RS13745 PF01554 MatE LI64_RS13755 PF04363 Protein of unknown function (DUF496) LI64_RS13760 PF04632 Fusaric acid resistance protein family LI64_RS13765 PF06445 GyrI-like small molecule binding domain LI64_RS13770 PF00768 D-alanyl-D-alanine carboxypeptidase LI64_RS13770 PF07943 Penicillin-binding protein 5, C-terminal domain LI64_RS13775 PF00929 Exonuclease LI64_RS13775 PF08411 Exonuclease C-terminal LI64_RS13780 PF13520 Amino acid permease LI64_RS13785 PF03466 LysR substrate binding domain LI64_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS13790 PF01370 NAD dependent epimerase/dehydratase family LI64_RS13795 PF08029 HisG, C-terminal domain LI64_RS13795 PF01634 ATP phosphoribosyltransferase LI64_RS13800 PF00815 Histidinol dehydrogenase LI64_RS13805 PF00155 Aminotransferase class I and II LI64_RS13810 PF08645 Polynucleotide kinase 3 phosphatase LI64_RS13810 PF00475 Imidazoleglycerol-phosphate dehydratase LI64_RS13815 PF00117 Glutamine amidotransferase class-I LI64_RS13820 PF00977 Histidine biosynthesis protein LI64_RS13825 PF00977 Histidine biosynthesis protein LI64_RS13830 PF01502 Phosphoribosyl-AMP cyclohydrolase LI64_RS13830 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LI64_RS13835 PF02706 Chain length determinant protein LI64_RS13840 PF01370 NAD dependent epimerase/dehydratase family LI64_RS13845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI64_RS13845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI64_RS13845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI64_RS13850 PF00483 Nucleotidyl transferase LI64_RS13855 PF16363 GDP-mannose 4,6 dehydratase LI64_RS13860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI64_RS13860 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LI64_RS13865 PF16363 GDP-mannose 4,6 dehydratase LI64_RS13870 PF00534 Glycosyl transferases group 1 LI64_RS13870 PF13439 Glycosyltransferase Family 4 LI64_RS13885 PF00534 Glycosyl transferases group 1 LI64_RS13885 PF13439 Glycosyltransferase Family 4 LI64_RS13895 PF00535 Glycosyl transferase family 2 LI64_RS13905 PF00483 Nucleotidyl transferase LI64_RS13915 PF00534 Glycosyl transferases group 1 LI64_RS13915 PF13439 Glycosyltransferase Family 4 LI64_RS13920 PF04230 Polysaccharide pyruvyl transferase LI64_RS13930 PF02397 Bacterial sugar transferase LI64_RS13935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI64_RS13935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI64_RS13935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI64_RS13935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI64_RS13940 PF01050 Mannose-6-phosphate isomerase LI64_RS13940 PF00483 Nucleotidyl transferase LI64_RS13945 PF00534 Glycosyl transferases group 1 LI64_RS13945 PF13579 Glycosyl transferase 4-like domain LI64_RS13950 PF00293 NUDIX domain LI64_RS13955 PF01370 NAD dependent epimerase/dehydratase family LI64_RS13960 PF16363 GDP-mannose 4,6 dehydratase LI64_RS13965 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS13970 PF00535 Glycosyl transferase family 2 LI64_RS13980 PF00534 Glycosyl transferases group 1 LI64_RS13980 PF13439 Glycosyltransferase Family 4 LI64_RS13985 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS13990 PF00535 Glycosyl transferase family 2 LI64_RS13995 PF02706 Chain length determinant protein LI64_RS13995 PF13614 AAA domain LI64_RS13995 PF13807 G-rich domain on putative tyrosine kinase LI64_RS14000 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI64_RS14005 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LI64_RS14005 PF10531 SLBB domain LI64_RS14005 PF02563 Polysaccharide biosynthesis/export protein LI64_RS14010 PF00571 CBS domain LI64_RS14010 PF03471 Transporter associated domain LI64_RS14010 PF03741 Integral membrane protein TerC family LI64_RS14015 PF05170 AsmA family LI64_RS14020 PF00692 dUTPase LI64_RS14025 PF00485 Phosphoribulokinase / Uridine kinase family LI64_RS14030 PF13426 PAS domain LI64_RS14030 PF00563 EAL domain LI64_RS14030 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS14030 PF08447 PAS fold LI64_RS14030 PF05231 MASE1 LI64_RS14030 PF08448 PAS fold LI64_RS14035 PF00730 HhH-GPD superfamily base excision DNA repair protein LI64_RS14035 PF06029 AlkA N-terminal domain LI64_RS14040 PF00012 Hsp70 protein LI64_RS14045 PF13533 Biotin-lipoyl like LI64_RS14050 PF00873 AcrB/AcrD/AcrF family LI64_RS14055 PF00873 AcrB/AcrD/AcrF family LI64_RS14060 PF07690 Major Facilitator Superfamily LI64_RS14065 PF00672 HAMP domain LI64_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS14065 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS14070 PF00486 Transcriptional regulatory protein, C terminal LI64_RS14070 PF00072 Response regulator receiver domain LI64_RS14075 PF01136 Peptidase family U32 LI64_RS14075 PF16325 Peptidase family U32 C-terminal domain LI64_RS14080 PF00781 Diacylglycerol kinase catalytic domain LI64_RS14085 PF01791 DeoC/LacD family aldolase LI64_RS14090 PF03825 Nucleoside H+ symporter LI64_RS14095 PF03747 ADP-ribosylglycohydrolase LI64_RS14100 PF00294 pfkB family carbohydrate kinase LI64_RS14105 PF07702 UTRA domain LI64_RS14105 PF00392 Bacterial regulatory proteins, gntR family LI64_RS14110 PF08543 Phosphomethylpyrimidine kinase LI64_RS14115 PF02110 Hydroxyethylthiazole kinase family LI64_RS14185 PF00202 Aminotransferase class-III LI64_RS14190 PF00282 Pyridoxal-dependent decarboxylase conserved domain LI64_RS14195 PF02706 Chain length determinant protein LI64_RS14195 PF13807 G-rich domain on putative tyrosine kinase LI64_RS14195 PF13614 AAA domain LI64_RS14200 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI64_RS14205 PF10531 SLBB domain LI64_RS14205 PF02563 Polysaccharide biosynthesis/export protein LI64_RS14205 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LI64_RS14210 PF11776 Nickel/cobalt transporter regulator LI64_RS14220 PF10609 NUBPL iron-transfer P-loop NTPase LI64_RS14225 PF09334 tRNA synthetases class I (M) LI64_RS14225 PF01588 Putative tRNA binding domain LI64_RS14230 PF07308 Protein of unknown function (DUF1456) LI64_RS14235 PF04397 LytTr DNA-binding domain LI64_RS14235 PF00072 Response regulator receiver domain LI64_RS14240 PF06580 Histidine kinase LI64_RS14240 PF07694 5TMR of 5TMR-LYT LI64_RS14245 PF13411 MerR HTH family regulatory protein LI64_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14255 PF00005 ABC transporter LI64_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI64_RS14270 PF14310 Fibronectin type III-like domain LI64_RS14270 PF00933 Glycosyl hydrolase family 3 N terminal domain LI64_RS14270 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI64_RS14275 PF01565 FAD binding domain LI64_RS14275 PF09330 D-lactate dehydrogenase, membrane binding LI64_RS14285 PF00768 D-alanyl-D-alanine carboxypeptidase LI64_RS14290 PF04893 Yip1 domain LI64_RS14295 PF09335 SNARE associated Golgi protein LI64_RS14305 PF02321 Outer membrane efflux protein LI64_RS14310 PF01207 Dihydrouridine synthase (Dus) LI64_RS14315 PF03788 LrgA family LI64_RS14320 PF04172 LrgB-like family LI64_RS14325 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LI64_RS14325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI64_RS14330 PF02698 DUF218 domain LI64_RS14335 PF02653 Branched-chain amino acid transport system / permease component LI64_RS14340 PF00005 ABC transporter LI64_RS14345 PF13407 Periplasmic binding protein domain LI64_RS14350 PF00356 Bacterial regulatory proteins, lacI family LI64_RS14355 PF04235 Protein of unknown function (DUF418) LI64_RS14360 PF01227 GTP cyclohydrolase I LI64_RS14365 PF06779 Uncharacterised MFS-type transporter YbfB LI64_RS14370 PF00756 Putative esterase LI64_RS14375 PF00593 TonB dependent receptor LI64_RS14375 PF07715 TonB-dependent Receptor Plug Domain LI64_RS14380 PF00324 Amino acid permease LI64_RS14385 PF03466 LysR substrate binding domain LI64_RS14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS14390 PF03601 Conserved hypothetical protein 698 LI64_RS14395 PF01261 Xylose isomerase-like TIM barrel LI64_RS14400 PF02378 Phosphotransferase system, EIIC LI64_RS14400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS14405 PF00294 pfkB family carbohydrate kinase LI64_RS14410 PF00381 PTS HPr component phosphorylation site LI64_RS14410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS14420 PF07690 Major Facilitator Superfamily LI64_RS14425 PF03692 Putative zinc- or iron-chelating domain LI64_RS14430 PF01132 Elongation factor P (EF-P) OB domain LI64_RS14430 PF09285 Elongation factor P, C-terminal LI64_RS14430 PF08207 Elongation factor P (EF-P) KOW-like domain LI64_RS14435 PF03786 D-mannonate dehydratase (UxuA) LI64_RS14440 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS14440 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS14445 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI64_RS14445 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI64_RS14450 PF01569 PAP2 superfamily LI64_RS14455 PF00877 NlpC/P60 family LI64_RS14460 PF12792 CSS motif domain associated with EAL LI64_RS14460 PF00563 EAL domain LI64_RS14465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI64_RS14470 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14475 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14475 PF12911 N-terminal TM domain of oligopeptide transport permease C LI64_RS14480 PF00005 ABC transporter LI64_RS14480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI64_RS14485 PF13989 YejG-like protein LI64_RS14490 PF07690 Major Facilitator Superfamily LI64_RS14495 PF00849 RNA pseudouridylate synthase LI64_RS14495 PF01479 S4 domain LI64_RS14500 PF04851 Type III restriction enzyme, res subunit LI64_RS14500 PF00271 Helicase conserved C-terminal domain LI64_RS14505 PF01386 Ribosomal L25p family LI64_RS14510 PF04245 37-kD nucleoid-associated bacterial protein LI64_RS14515 PF07208 Protein of unknown function (DUF1414) LI64_RS14520 PF11893 Domain of unknown function (DUF3413) LI64_RS14520 PF00884 Sulfatase LI64_RS14530 PF10749 Protein of unknown function (DUF2534) LI64_RS14535 PF03974 Ecotin LI64_RS14540 PF06039 Malate:quinone oxidoreductase (Mqo) LI64_RS14545 PF01740 STAS domain LI64_RS14545 PF00916 Sulfate permease family LI64_RS14550 PF00571 CBS domain LI64_RS14550 PF01769 Divalent cation transporter LI64_RS14550 PF03448 MgtE intracellular N domain LI64_RS14555 PF00005 ABC transporter LI64_RS14560 PF13532 2OG-Fe(II) oxygenase superfamily LI64_RS14565 PF12833 Helix-turn-helix domain LI64_RS14565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI64_RS14565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI64_RS14565 PF02805 Metal binding domain of Ada LI64_RS14570 PF02424 ApbE family LI64_RS14575 PF00267 Gram-negative porin LI64_RS14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS14580 PF16359 RcsD-ABL domain LI64_RS14580 PF01627 Hpt domain LI64_RS14585 PF00196 Bacterial regulatory proteins, luxR family LI64_RS14585 PF00072 Response regulator receiver domain LI64_RS14590 PF00072 Response regulator receiver domain LI64_RS14590 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS14590 PF09456 RcsC Alpha-Beta-Loop (ABL) LI64_RS14595 PF00521 DNA gyrase/topoisomerase IV, subunit A LI64_RS14595 PF03989 DNA gyrase C-terminal domain, beta-propeller LI64_RS14605 PF00317 Ribonucleotide reductase, all-alpha domain LI64_RS14605 PF02867 Ribonucleotide reductase, barrel domain LI64_RS14605 PF03477 ATP cone domain LI64_RS14610 PF00268 Ribonucleotide reductase, small chain LI64_RS14615 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS14620 PF03009 Glycerophosphoryl diester phosphodiesterase family LI64_RS14625 PF07690 Major Facilitator Superfamily LI64_RS14630 PF04324 BFD-like [2Fe-2S] binding domain LI64_RS14630 PF01266 FAD dependent oxidoreductase LI64_RS14635 PF00890 FAD binding domain LI64_RS14640 PF13183 4Fe-4S dicluster domain LI64_RS14640 PF02754 Cysteine-rich domain LI64_RS14645 PF00994 Probable molybdopterin binding domain LI64_RS14650 PF07437 YfaZ precursor LI64_RS14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS14655 PF08521 Two-component sensor kinase N-terminal LI64_RS14655 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS14660 PF00486 Transcriptional regulatory protein, C terminal LI64_RS14660 PF00072 Response regulator receiver domain LI64_RS14675 PF01970 Tripartite tricarboxylate transporter TctA family LI64_RS14680 PF00501 AMP-binding enzyme LI64_RS14680 PF13193 AMP-binding enzyme C-terminal domain LI64_RS14685 PF13378 Enolase C-terminal domain-like LI64_RS14690 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS14695 PF12697 Alpha/beta hydrolase family LI64_RS14700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS14700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS14700 PF16582 Middle domain of thiamine pyrophosphate LI64_RS14705 PF00425 chorismate binding enzyme LI64_RS14710 PF05957 Bacterial protein of unknown function (DUF883) LI64_RS14715 PF13673 Acetyltransferase (GNAT) domain LI64_RS14720 PF12706 Beta-lactamase superfamily domain LI64_RS14725 PF01584 CheW-like domain LI64_RS14725 PF00072 Response regulator receiver domain LI64_RS14730 PF00361 Proton-conducting membrane transporter LI64_RS14735 PF00361 Proton-conducting membrane transporter LI64_RS14740 PF00361 Proton-conducting membrane transporter LI64_RS14740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LI64_RS14745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LI64_RS14750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LI64_RS14755 PF12838 4Fe-4S dicluster domain LI64_RS14760 PF00146 NADH dehydrogenase LI64_RS14765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI64_RS14765 PF01568 Molydopterin dinucleotide binding domain LI64_RS14765 PF00384 Molybdopterin oxidoreductase LI64_RS14765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS14770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI64_RS14770 PF10531 SLBB domain LI64_RS14770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI64_RS14780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LI64_RS14780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LI64_RS14785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI64_RS14790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LI64_RS14795 PF03466 LysR substrate binding domain LI64_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS14800 PF00155 Aminotransferase class I and II LI64_RS14810 PF02080 TrkA-C domain LI64_RS14810 PF03600 Citrate transporter LI64_RS14815 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS14820 PF03887 YfbU domain LI64_RS14825 PF04217 Protein of unknown function, DUF412 LI64_RS14830 PF00871 Acetokinase family LI64_RS14835 PF01515 Phosphate acetyl/butaryl transferase LI64_RS14835 PF07085 DRTGG domain LI64_RS14840 PF02780 Transketolase, C-terminal domain LI64_RS14840 PF02779 Transketolase, pyrimidine binding domain LI64_RS14840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LI64_RS14845 PF00456 Transketolase, thiamine diphosphate binding domain LI64_RS14850 PF03611 PTS system sugar-specific permease component LI64_RS14860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS14865 PF00356 Bacterial regulatory proteins, lacI family LI64_RS14870 PF00293 NUDIX domain LI64_RS14875 PF12850 Calcineurin-like phosphoesterase superfamily domain LI64_RS14880 PF14834 Glutathione S-transferase, C-terminal domain LI64_RS14880 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS14885 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS14885 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS14890 PF02152 Dihydroneopterin aldolase LI64_RS14895 PF08338 Domain of unknown function (DUF1731) LI64_RS14895 PF01370 NAD dependent epimerase/dehydratase family LI64_RS14900 PF13302 Acetyltransferase (GNAT) domain LI64_RS14905 PF00005 ABC transporter LI64_RS14910 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14915 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS14920 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS14925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS14930 PF02441 Flavoprotein LI64_RS14935 PF00156 Phosphoribosyl transferase domain LI64_RS14940 PF02674 Colicin V production protein LI64_RS14945 PF05036 Sporulation related domain LI64_RS14950 PF08245 Mur ligase middle domain LI64_RS14950 PF02875 Mur ligase family, glutamate ligase domain LI64_RS14955 PF01039 Carboxyl transferase domain LI64_RS14955 PF17848 Acetyl-coA carboxylase zinc finger domain LI64_RS14960 PF09335 SNARE associated Golgi protein LI64_RS14965 PF01416 tRNA pseudouridine synthase LI64_RS14970 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI64_RS14970 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI64_RS14975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI64_RS14975 PF11890 Domain of unknown function (DUF3410) LI64_RS14975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS14985 PF07690 Major Facilitator Superfamily LI64_RS14990 PF00109 Beta-ketoacyl synthase, N-terminal domain LI64_RS14990 PF02801 Beta-ketoacyl synthase, C-terminal domain LI64_RS14995 PF01266 FAD dependent oxidoreductase LI64_RS14995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LI64_RS15000 PF08891 YfcL protein LI64_RS15005 PF04315 Elongation factor P hydroxylase LI64_RS15010 PF01925 Sulfite exporter TauE/SafE LI64_RS15015 PF03411 Penicillin-insensitive murein endopeptidase LI64_RS15020 PF01264 Chorismate synthase LI64_RS15025 PF05175 Methyltransferase small domain LI64_RS15030 PF01713 Smr domain LI64_RS15035 PF00300 Histidine phosphatase superfamily (branch 1) LI64_RS15040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI64_RS15040 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS15040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI64_RS15045 PF02803 Thiolase, C-terminal domain LI64_RS15045 PF00108 Thiolase, N-terminal domain LI64_RS15050 PF04175 Protein of unknown function (DUF406) LI64_RS15055 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LI64_RS15060 PF04333 MlaA lipoprotein LI64_RS15065 PF01226 Formate/nitrite transporter LI64_RS15075 PF03279 Bacterial lipid A biosynthesis acyltransferase LI64_RS15085 PF00155 Aminotransferase class I and II LI64_RS15090 PF06580 Histidine kinase LI64_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS15090 PF07694 5TMR of 5TMR-LYT LI64_RS15095 PF04397 LytTr DNA-binding domain LI64_RS15095 PF00072 Response regulator receiver domain LI64_RS15100 PF02685 Glucokinase LI64_RS15105 PF00654 Voltage gated chloride channel LI64_RS15110 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS15110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS15110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS15115 PF00248 Aldo/keto reductase family LI64_RS15120 PF10697 Protein of unknown function (DUF2502) LI64_RS15125 PF01566 Natural resistance-associated macrophage protein LI64_RS15130 PF01773 Na+ dependent nucleoside transporter N-terminus LI64_RS15130 PF07662 Na+ dependent nucleoside transporter C-terminus LI64_RS15130 PF07670 Nucleoside recognition LI64_RS15135 PF00563 EAL domain LI64_RS15135 PF05231 MASE1 LI64_RS15150 PF07037 Putative transcription regulator (DUF1323) LI64_RS15155 PF07037 Putative transcription regulator (DUF1323) LI64_RS15160 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI64_RS15190 PF03466 LysR substrate binding domain LI64_RS15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS15195 PF13593 SBF-like CPA transporter family (DUF4137) LI64_RS15200 PF12843 Putative quorum-sensing-regulated virulence factor LI64_RS15205 PF12826 Helix-hairpin-helix motif LI64_RS15205 PF00533 BRCA1 C Terminus (BRCT) domain LI64_RS15205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LI64_RS15205 PF01653 NAD-dependent DNA ligase adenylation domain LI64_RS15205 PF03120 NAD-dependent DNA ligase OB-fold domain LI64_RS15210 PF04354 ZipA, C-terminal FtsZ-binding domain LI64_RS15220 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS15225 PF00381 PTS HPr component phosphorylation site LI64_RS15230 PF02896 PEP-utilising enzyme, TIM barrel domain LI64_RS15230 PF00391 PEP-utilising enzyme, mobile domain LI64_RS15230 PF05524 PEP-utilising enzyme, N-terminal LI64_RS15235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS15240 PF08543 Phosphomethylpyrimidine kinase LI64_RS15245 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS15250 PF00005 ABC transporter LI64_RS15255 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS15260 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS15270 PF04261 Dyp-type peroxidase family LI64_RS15275 PF06572 Protein of unknown function (DUF1131) LI64_RS15280 PF11143 Protein of unknown function (DUF2919) LI64_RS15285 PF00583 Acetyltransferase (GNAT) family LI64_RS15290 PF01520 N-acetylmuramoyl-L-alanine amidase LI64_RS15295 PF01218 Coproporphyrinogen III oxidase LI64_RS15300 PF03949 Malic enzyme, NAD binding domain LI64_RS15300 PF01515 Phosphate acetyl/butaryl transferase LI64_RS15300 PF00390 Malic enzyme, N-terminal domain LI64_RS15305 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI64_RS15310 PF02780 Transketolase, C-terminal domain LI64_RS15310 PF00456 Transketolase, thiamine diphosphate binding domain LI64_RS15310 PF02779 Transketolase, pyrimidine binding domain LI64_RS15315 PF06674 Protein of unknown function (DUF1176) LI64_RS15320 PF00293 NUDIX domain LI64_RS15325 PF13247 4Fe-4S dicluster domain LI64_RS15325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS15325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI64_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS15335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LI64_RS15335 PF00672 HAMP domain LI64_RS15335 PF07730 Histidine kinase LI64_RS15340 PF00873 AcrB/AcrD/AcrF family LI64_RS15345 PF03960 ArsC family LI64_RS15350 PF01546 Peptidase family M20/M25/M40 LI64_RS15350 PF07687 Peptidase dimerisation domain LI64_RS15355 PF13980 Uncharacterised protein family (UPF0370) LI64_RS15360 PF02230 Phospholipase/Carboxylesterase LI64_RS15365 PF17176 tRNA-binding domain LI64_RS15365 PF13718 GNAT acetyltransferase 2 LI64_RS15365 PF05127 Helicase LI64_RS15365 PF08351 Domain of unknown function (DUF1726) LI64_RS15370 PF04228 Putative neutral zinc metallopeptidase LI64_RS15375 PF01259 SAICAR synthetase LI64_RS15380 PF06804 NlpB/DapX lipoprotein LI64_RS15385 PF00701 Dihydrodipicolinate synthetase family LI64_RS15390 PF01842 ACT domain LI64_RS15395 PF00578 AhpC/TSA family LI64_RS15400 PF01594 AI-2E family transporter LI64_RS15405 PF01435 Peptidase family M48 LI64_RS15410 PF03960 ArsC family LI64_RS15420 PF02378 Phosphotransferase system, EIIC LI64_RS15425 PF01112 Asparaginase LI64_RS15430 PF00883 Cytosol aminopeptidase family, catalytic domain LI64_RS15430 PF02789 Cytosol aminopeptidase family, N-terminal domain LI64_RS15435 PF00308 Bacterial dnaA protein LI64_RS15440 PF00860 Permease family LI64_RS15450 PF00232 Glycosyl hydrolase family 1 LI64_RS15455 PF02769 AIR synthase related protein, C-terminal domain LI64_RS15455 PF00586 AIR synthase related protein, N-terminal domain LI64_RS15460 PF00551 Formyl transferase LI64_RS15465 PF13090 Polyphosphate kinase C-terminal domain 2 LI64_RS15465 PF13089 Polyphosphate kinase N-terminal domain LI64_RS15465 PF17941 Polyphosphate kinase C-terminal domain 1 LI64_RS15465 PF02503 Polyphosphate kinase middle domain LI64_RS15470 PF02541 Ppx/GppA phosphatase family LI64_RS15475 PF05231 MASE1 LI64_RS15475 PF00563 EAL domain LI64_RS15500 PF06629 MltA-interacting protein MipA LI64_RS15505 PF00072 Response regulator receiver domain LI64_RS15505 PF00486 Transcriptional regulatory protein, C terminal LI64_RS15510 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS15520 PF00873 AcrB/AcrD/AcrF family LI64_RS15525 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS15525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS15530 PF12833 Helix-turn-helix domain LI64_RS15530 PF06445 GyrI-like small molecule binding domain LI64_RS15545 PF13737 Transposase DDE domain LI64_RS15560 PF00589 Phage integrase family LI64_RS15560 PF13356 Arm DNA-binding domain LI64_RS15570 PF00958 GMP synthase C terminal domain LI64_RS15570 PF00117 Glutamine amidotransferase class-I LI64_RS15570 PF02540 NAD synthase LI64_RS15575 PF00571 CBS domain LI64_RS15575 PF00478 IMP dehydrogenase / GMP reductase domain LI64_RS15580 PF13742 OB-fold nucleic acid binding domain LI64_RS15580 PF02601 Exonuclease VII, large subunit LI64_RS15585 PF16485 Protealysin propeptide LI64_RS15585 PF02868 Thermolysin metallopeptidase, alpha-helical domain LI64_RS15585 PF01447 Thermolysin metallopeptidase, catalytic domain LI64_RS15595 PF07191 zinc-ribbons LI64_RS15605 PF00854 POT family LI64_RS15615 PF00267 Gram-negative porin LI64_RS15630 PF01926 50S ribosome-binding GTPase LI64_RS15630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LI64_RS15635 PF13360 PQQ-like domain LI64_RS15640 PF09976 Tetratricopeptide repeat-like domain LI64_RS15645 PF03129 Anticodon binding domain LI64_RS15645 PF13393 Histidyl-tRNA synthetase LI64_RS15650 PF04551 GcpE protein LI64_RS15655 PF13464 Domain of unknown function (DUF4115) LI64_RS15660 PF04055 Radical SAM superfamily LI64_RS15665 PF00334 Nucleoside diphosphate kinase LI64_RS15680 PF12800 4Fe-4S binding domain LI64_RS15680 PF13247 4Fe-4S dicluster domain LI64_RS15685 PF00384 Molybdopterin oxidoreductase LI64_RS15685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS15685 PF01568 Molydopterin dinucleotide binding domain LI64_RS15690 PF00905 Penicillin binding protein transpeptidase domain LI64_RS15690 PF00912 Transglycosylase LI64_RS15690 PF06832 Penicillin-Binding Protein C-terminus Family LI64_RS15695 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LI64_RS15695 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LI64_RS15695 PF00207 Alpha-2-macroglobulin family LI64_RS15695 PF07703 Alpha-2-macroglobulin bait region domain LI64_RS15695 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LI64_RS15695 PF01835 MG2 domain LI64_RS15695 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LI64_RS15695 PF17962 Bacterial macroglobulin domain 6 LI64_RS15695 PF07678 A-macroglobulin TED domain LI64_RS15700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS15700 PF02378 Phosphotransferase system, EIIC LI64_RS15700 PF00367 phosphotransferase system, EIIB LI64_RS15705 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI64_RS15705 PF02056 Family 4 glycosyl hydrolase LI64_RS15710 PF00581 Rhodanese-like domain LI64_RS15715 PF01418 Helix-turn-helix domain, rpiR family LI64_RS15715 PF01380 SIS domain LI64_RS15720 PF07179 SseB protein N-terminal domain LI64_RS15720 PF14581 SseB protein C-terminal domain LI64_RS15725 PF12404 Peptidase LI64_RS15725 PF00883 Cytosol aminopeptidase family, catalytic domain LI64_RS15730 PF04384 Iron-sulphur cluster assembly LI64_RS15735 PF00111 2Fe-2S iron-sulfur cluster binding domain LI64_RS15740 PF00012 Hsp70 protein LI64_RS15745 PF07743 HSCB C-terminal oligomerisation domain LI64_RS15750 PF01521 Iron-sulphur cluster biosynthesis LI64_RS15755 PF01592 NifU-like N terminal domain LI64_RS15760 PF00266 Aminotransferase class-V LI64_RS15765 PF02082 Transcriptional regulator LI64_RS15770 PF00588 SpoU rRNA Methylase family LI64_RS15775 PF00459 Inositol monophosphatase family LI64_RS15780 PF03824 High-affinity nickel-transport protein LI64_RS15790 PF00874 PRD domain LI64_RS15795 PF12832 MFS_1 like family LI64_RS15800 PF07681 DoxX LI64_RS15805 PF00464 Serine hydroxymethyltransferase LI64_RS15815 PF00175 Oxidoreductase NAD-binding domain LI64_RS15815 PF00042 Globin LI64_RS15815 PF00970 Oxidoreductase FAD-binding domain LI64_RS15820 PF00543 Nitrogen regulatory protein P-II LI64_RS15825 PF00158 Sigma-54 interaction domain LI64_RS15825 PF00072 Response regulator receiver domain LI64_RS15830 PF13942 YfhG lipoprotein LI64_RS15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS15835 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS15840 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LI64_RS15840 PF02769 AIR synthase related protein, C-terminal domain LI64_RS15840 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LI64_RS15845 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI64_RS15845 PF01464 Transglycosylase SLT domain LI64_RS15850 PF14437 MafB19-like deaminase LI64_RS15860 PF00367 phosphotransferase system, EIIB LI64_RS15860 PF02378 Phosphotransferase system, EIIC LI64_RS15865 PF01380 SIS domain LI64_RS15870 PF01418 Helix-turn-helix domain, rpiR family LI64_RS15870 PF01380 SIS domain LI64_RS15875 PF12838 4Fe-4S dicluster domain LI64_RS15880 PF01648 4'-phosphopantetheinyl transferase superfamily LI64_RS15885 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LI64_RS15890 PF11967 Recombination protein O N terminal LI64_RS15890 PF02565 Recombination protein O C terminal LI64_RS15895 PF01926 50S ribosome-binding GTPase LI64_RS15895 PF07650 KH domain LI64_RS15900 PF14622 Ribonuclease-III-like LI64_RS15900 PF00035 Double-stranded RNA binding motif LI64_RS15905 PF10502 Signal peptidase, peptidase S26 LI64_RS15910 PF06421 GTP-binding protein LepA C-terminus LI64_RS15910 PF00679 Elongation factor G C-terminus LI64_RS15910 PF00009 Elongation factor Tu GTP binding domain LI64_RS15910 PF03144 Elongation factor Tu domain 2 LI64_RS15920 PF03888 MucB/RseB N-terminal domain LI64_RS15920 PF17188 MucB/RseB C-terminal domain LI64_RS15925 PF03873 Anti sigma-E protein RseA, C-terminal domain LI64_RS15925 PF03872 Anti sigma-E protein RseA, N-terminal domain LI64_RS15930 PF08281 Sigma-70, region 4 LI64_RS15930 PF04542 Sigma-70 region 2 LI64_RS15935 PF00890 FAD binding domain LI64_RS15935 PF02910 Fumarate reductase flavoprotein C-term LI64_RS15940 PF05175 Methyltransferase small domain LI64_RS15945 PF00271 Helicase conserved C-terminal domain LI64_RS15945 PF00270 DEAD/DEAH box helicase LI64_RS15950 PF01228 Glycine radical LI64_RS15955 PF03167 Uracil DNA glycosylase superfamily LI64_RS15960 PF08032 RNA 2'-O ribose methyltransferase substrate binding LI64_RS15960 PF00588 SpoU rRNA Methylase family LI64_RS15965 PF00085 Thioredoxin LI64_RS15970 PF03942 DTW domain LI64_RS15975 PF13607 Succinyl-CoA ligase like flavodoxin domain LI64_RS15975 PF13380 CoA binding domain LI64_RS15975 PF00583 Acetyltransferase (GNAT) family LI64_RS15980 PF13091 PLD-like domain LI64_RS15985 PF10043 Predicted periplasmic lipoprotein (DUF2279) LI64_RS15990 PF00083 Sugar (and other) transporter LI64_RS16020 PF02861 Clp amino terminal domain, pathogenicity island component LI64_RS16020 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS16020 PF17871 AAA lid domain LI64_RS16020 PF10431 C-terminal, D2-small domain, of ClpB protein LI64_RS16020 PF07724 AAA domain (Cdc48 subfamily) LI64_RS16025 PF02578 Multi-copper polyphenol oxidoreductase laccase LI64_RS16030 PF01479 S4 domain LI64_RS16030 PF00849 RNA pseudouridylate synthase LI64_RS16035 PF13525 Outer membrane lipoprotein LI64_RS16040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LI64_RS16045 PF00800 Prephenate dehydratase LI64_RS16045 PF01817 Chorismate mutase type II LI64_RS16050 PF08450 SMP-30/Gluconolactonase/LRE-like region LI64_RS16055 PF01817 Chorismate mutase type II LI64_RS16055 PF02153 Prephenate dehydrogenase LI64_RS16060 PF00793 DAHP synthetase I family LI64_RS16070 PF17152 Periplasmic sensor domain LI64_RS16070 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS16075 PF00691 OmpA family LI64_RS16090 PF01245 Ribosomal protein L19 LI64_RS16095 PF01746 tRNA (Guanine-1)-methyltransferase LI64_RS16100 PF01782 RimM N-terminal domain LI64_RS16100 PF05239 PRC-barrel domain LI64_RS16105 PF00886 Ribosomal protein S16 LI64_RS16110 PF02978 Signal peptide binding domain LI64_RS16110 PF02881 SRP54-type protein, helical bundle domain LI64_RS16110 PF00448 SRP54-type protein, GTPase domain LI64_RS16115 PF01578 Cytochrome C assembly protein LI64_RS16120 PF01595 Cyclin M transmembrane N-terminal domain LI64_RS16120 PF00571 CBS domain LI64_RS16120 PF03471 Transporter associated domain LI64_RS16125 PF01025 GrpE LI64_RS16135 PF01513 ATP-NAD kinase LI64_RS16140 PF02463 RecF/RecN/SMC N terminal domain LI64_RS16145 PF04355 SmpA / OmlA family LI64_RS16150 PF03658 RnfH family Ubiquitin LI64_RS16155 PF03364 Polyketide cyclase / dehydrase and lipid transport LI64_RS16160 PF01668 SmpB protein LI64_RS16165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI64_RS16170 PF01380 SIS domain LI64_RS16180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS16180 PF00367 phosphotransferase system, EIIB LI64_RS16180 PF02378 Phosphotransferase system, EIIC LI64_RS16190 PF07728 AAA domain (dynein-related subfamily) LI64_RS16190 PF12102 Domain of unknown function (DUF3578) LI64_RS16190 PF12102 Domain of unknown function (DUF3578) LI64_RS16190 PF07728 AAA domain (dynein-related subfamily) LI64_RS16200 PF13936 Helix-turn-helix domain LI64_RS16200 PF00665 Integrase core domain LI64_RS16205 PF13737 Transposase DDE domain LI64_RS16210 PF00294 pfkB family carbohydrate kinase LI64_RS16215 PF01527 Transposase LI64_RS16220 PF13333 Integrase core domain LI64_RS16220 PF13276 HTH-like domain LI64_RS16220 PF00665 Integrase core domain LI64_RS16230 PF13737 Transposase DDE domain LI64_RS16240 PF01679 Proteolipid membrane potential modulator LI64_RS16245 PF11127 Protein of unknown function (DUF2892) LI64_RS16245 PF00581 Rhodanese-like domain LI64_RS16255 PF00816 H-NS histone family LI64_RS16260 PF06610 L-alanine exporter LI64_RS16265 PF09400 Protein of unknown function (DUF2002) LI64_RS16270 PF05957 Bacterial protein of unknown function (DUF883) LI64_RS16275 PF00462 Glutaredoxin LI64_RS16280 PF07972 NrdI Flavodoxin like LI64_RS16285 PF08343 Ribonucleotide reductase N-terminal LI64_RS16285 PF00317 Ribonucleotide reductase, all-alpha domain LI64_RS16285 PF02867 Ribonucleotide reductase, barrel domain LI64_RS16290 PF00268 Ribonucleotide reductase, small chain LI64_RS16295 PF00005 ABC transporter LI64_RS16295 PF00571 CBS domain LI64_RS16300 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS16305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI64_RS16310 PF07690 Major Facilitator Superfamily LI64_RS16315 PF01047 MarR family LI64_RS16320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS16320 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS16325 PF07690 Major Facilitator Superfamily LI64_RS16330 PF00682 HMGL-like LI64_RS16330 PF08502 LeuA allosteric (dimerisation) domain LI64_RS16335 PF12833 Helix-turn-helix domain LI64_RS16335 PF12852 Cupin LI64_RS16340 PF02664 S-Ribosylhomocysteinase (LuxS) LI64_RS16345 PF04262 Glutamate-cysteine ligase LI64_RS16350 PF09335 SNARE associated Golgi protein LI64_RS16355 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS16385 PF02599 Global regulator protein family LI64_RS16390 PF02272 DHHA1 domain LI64_RS16390 PF01411 tRNA synthetases class II (A) LI64_RS16390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI64_RS16395 PF02631 RecX family LI64_RS16400 PF00154 recA bacterial DNA recombination protein LI64_RS16405 PF02464 Competence-damaged protein LI64_RS16410 PF01297 Zinc-uptake complex component A periplasmic LI64_RS16415 PF00950 ABC 3 transport family LI64_RS16420 PF00005 ABC transporter LI64_RS16425 PF13406 Transglycosylase SLT domain LI64_RS16430 PF01380 SIS domain LI64_RS16430 PF00571 CBS domain LI64_RS16435 PF00158 Sigma-54 interaction domain LI64_RS16435 PF01590 GAF domain LI64_RS16440 PF00301 Rubredoxin LI64_RS16440 PF00753 Metallo-beta-lactamase superfamily LI64_RS16440 PF00258 Flavodoxin LI64_RS16445 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS16445 PF18113 Rubredoxin binding C-terminal domain LI64_RS16450 PF03824 High-affinity nickel-transport protein LI64_RS16455 PF17788 HypF Kae1-like domain LI64_RS16455 PF01300 Telomere recombination LI64_RS16455 PF00708 Acylphosphatase LI64_RS16455 PF07503 HypF finger LI64_RS16460 PF13247 4Fe-4S dicluster domain LI64_RS16460 PF12800 4Fe-4S binding domain LI64_RS16465 PF00356 Bacterial regulatory proteins, lacI family LI64_RS16470 PF02378 Phosphotransferase system, EIIC LI64_RS16470 PF00367 phosphotransferase system, EIIB LI64_RS16475 PF00232 Glycosyl hydrolase family 1 LI64_RS16480 PF01750 Hydrogenase maturation protease LI64_RS16485 PF07450 Formate hydrogenlyase maturation protein HycH LI64_RS16490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI64_RS16495 PF12838 4Fe-4S dicluster domain LI64_RS16500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LI64_RS16500 PF00374 Nickel-dependent hydrogenase LI64_RS16500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LI64_RS16505 PF00146 NADH dehydrogenase LI64_RS16510 PF00361 Proton-conducting membrane transporter LI64_RS16515 PF13247 4Fe-4S dicluster domain LI64_RS16520 PF11046 Transcriptional repressor of hyc and hyp operons LI64_RS16525 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LI64_RS16530 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI64_RS16535 PF01455 HupF/HypC family LI64_RS16540 PF01924 Hydrogenase formation hypA family LI64_RS16545 PF02769 AIR synthase related protein, C-terminal domain LI64_RS16545 PF00586 AIR synthase related protein, N-terminal domain LI64_RS16550 PF00158 Sigma-54 interaction domain LI64_RS16550 PF02954 Bacterial regulatory protein, Fis family LI64_RS16550 PF01590 GAF domain LI64_RS16560 PF01032 FecCD transport family LI64_RS16565 PF00005 ABC transporter LI64_RS16570 PF07690 Major Facilitator Superfamily LI64_RS16575 PF11756 Nitrous oxide-stimulated promoter LI64_RS16580 PF08845 Toxin SymE, type I toxin-antitoxin system LI64_RS16605 PF13737 Transposase DDE domain LI64_RS16630 PF00589 Phage integrase family LI64_RS16630 PF02899 Phage integrase, N-terminal SAM-like domain LI64_RS16650 PF13737 Transposase DDE domain LI64_RS16655 PF01026 TatD related DNase LI64_RS16680 PF00488 MutS domain V LI64_RS16680 PF05192 MutS domain III LI64_RS16680 PF05190 MutS family domain IV LI64_RS16680 PF05188 MutS domain II LI64_RS16680 PF01624 MutS domain I LI64_RS16690 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI64_RS16695 PF02441 Flavoprotein LI64_RS16700 PF01047 MarR family LI64_RS16705 PF03466 LysR substrate binding domain LI64_RS16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS16710 PF07690 Major Facilitator Superfamily LI64_RS16720 PF00140 Sigma-70 factor, region 1.2 LI64_RS16720 PF04545 Sigma-70, region 4 LI64_RS16720 PF04542 Sigma-70 region 2 LI64_RS16720 PF04539 Sigma-70 region 3 LI64_RS16725 PF01476 LysM domain LI64_RS16725 PF01551 Peptidase family M23 LI64_RS16735 PF01975 Survival protein SurE LI64_RS16740 PF01142 tRNA pseudouridine synthase D (TruD) LI64_RS16745 PF02542 YgbB family LI64_RS16750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LI64_RS16755 PF04977 Septum formation initiator LI64_RS16760 PF12084 Protein of unknown function (DUF3561) LI64_RS16770 PF00009 Elongation factor Tu GTP binding domain LI64_RS16775 PF01507 Phosphoadenosine phosphosulfate reductase family LI64_RS16780 PF10414 Sirohaem synthase dimerisation region LI64_RS16780 PF14824 Sirohaem biosynthesis protein central LI64_RS16780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI64_RS16785 PF04389 Peptidase family M28 LI64_RS16790 PF01507 Phosphoadenosine phosphosulfate reductase family LI64_RS16795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI64_RS16795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI64_RS16800 PF00175 Oxidoreductase NAD-binding domain LI64_RS16800 PF00258 Flavodoxin LI64_RS16800 PF00667 FAD binding domain LI64_RS16805 PF01242 6-pyruvoyl tetrahydropterin synthase LI64_RS16810 PF12833 Helix-turn-helix domain LI64_RS16815 PF07687 Peptidase dimerisation domain LI64_RS16815 PF01546 Peptidase family M20/M25/M40 LI64_RS16820 PF07690 Major Facilitator Superfamily LI64_RS16825 PF04055 Radical SAM superfamily LI64_RS16830 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LI64_RS16835 PF02378 Phosphotransferase system, EIIC LI64_RS16835 PF00367 phosphotransferase system, EIIB LI64_RS16835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI64_RS16840 PF01418 Helix-turn-helix domain, rpiR family LI64_RS16840 PF01380 SIS domain LI64_RS16845 PF00113 Enolase, C-terminal TIM barrel domain LI64_RS16845 PF03952 Enolase, N-terminal domain LI64_RS16850 PF06418 CTP synthase N-terminus LI64_RS16850 PF00117 Glutamine amidotransferase class-I LI64_RS16855 PF03819 MazG nucleotide pyrophosphohydrolase domain LI64_RS16860 PF13291 ACT domain LI64_RS16860 PF04607 Region found in RelA / SpoT proteins LI64_RS16860 PF02824 TGS domain LI64_RS16865 PF05958 tRNA (Uracil-5-)-methyltransferase LI64_RS16865 PF01938 TRAM domain LI64_RS16870 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS16870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LI64_RS16870 PF00072 Response regulator receiver domain LI64_RS16870 PF00672 HAMP domain LI64_RS16870 PF01627 Hpt domain LI64_RS16875 PF02595 Glycerate kinase family LI64_RS16880 PF13378 Enolase C-terminal domain-like LI64_RS16885 PF13378 Enolase C-terminal domain-like LI64_RS16885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS16890 PF07690 Major Facilitator Superfamily LI64_RS16895 PF00258 Flavodoxin LI64_RS16900 PF00849 RNA pseudouridylate synthase LI64_RS16905 PF04287 tRNA pseudouridine synthase C LI64_RS16910 PF07348 Syd protein (SUKH-2) LI64_RS16915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LI64_RS16915 PF14489 QueF-like protein LI64_RS16920 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LI64_RS16920 PF11892 Domain of unknown function (DUF3412) LI64_RS16920 PF03641 Possible lysine decarboxylase LI64_RS16930 PF03315 Serine dehydratase beta chain LI64_RS16930 PF03313 Serine dehydratase alpha chain LI64_RS16935 PF01367 5'-3' exonuclease, C-terminal SAM fold LI64_RS16935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI64_RS16940 PF01728 FtsJ-like methyltransferase LI64_RS16940 PF18125 RlmM ferredoxin-like domain LI64_RS16945 PF04241 Protein of unknown function (DUF423) LI64_RS16950 PF03466 LysR substrate binding domain LI64_RS16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS16955 PF06004 Bacterial protein of unknown function (DUF903) LI64_RS16960 PF00266 Aminotransferase class-V LI64_RS16965 PF02657 Fe-S metabolism associated domain LI64_RS16970 PF00899 ThiF family LI64_RS16975 PF06725 3D domain LI64_RS16975 PF03562 MltA specific insert domain LI64_RS16995 PF11741 AMIN domain LI64_RS16995 PF01520 N-acetylmuramoyl-L-alanine amidase LI64_RS17000 PF00583 Acetyltransferase (GNAT) family LI64_RS17000 PF00696 Amino acid kinase family LI64_RS17005 PF13538 UvrD-like helicase C-terminal domain LI64_RS17010 PF12705 PD-(D/E)XK nuclease superfamily LI64_RS17010 PF13361 UvrD-like helicase C-terminal domain LI64_RS17010 PF00580 UvrD/REP helicase N-terminal domain LI64_RS17015 PF16187 Middle or third domain of peptidase_M16 LI64_RS17015 PF05193 Peptidase M16 inactive domain LI64_RS17015 PF00675 Insulinase (Peptidase family M16) LI64_RS17020 PF17946 RecC C-terminal domain LI64_RS17025 PF12528 Type II secretion prepilin peptidase dependent protein C LI64_RS17025 PF07963 Prokaryotic N-terminal methylation motif LI64_RS17030 PF10713 Protein of unknown function (DUF2509) LI64_RS17035 PF07963 Prokaryotic N-terminal methylation motif LI64_RS17040 PF07963 Prokaryotic N-terminal methylation motif LI64_RS17045 PF00303 Thymidylate synthase LI64_RS17050 PF01790 Prolipoprotein diacylglyceryl transferase LI64_RS17055 PF05524 PEP-utilising enzyme, N-terminal LI64_RS17055 PF01590 GAF domain LI64_RS17055 PF02896 PEP-utilising enzyme, TIM barrel domain LI64_RS17055 PF00391 PEP-utilising enzyme, mobile domain LI64_RS17060 PF00293 NUDIX domain LI64_RS17065 PF02976 DNA mismatch repair enzyme MutH LI64_RS17070 PF06004 Bacterial protein of unknown function (DUF903) LI64_RS17075 PF00248 Aldo/keto reductase family LI64_RS17080 PF07690 Major Facilitator Superfamily LI64_RS17085 PF01553 Acyltransferase LI64_RS17085 PF00501 AMP-binding enzyme LI64_RS17090 PF00356 Bacterial regulatory proteins, lacI family LI64_RS17100 PF07729 FCD domain LI64_RS17100 PF00392 Bacterial regulatory proteins, gntR family LI64_RS17105 PF00232 Glycosyl hydrolase family 1 LI64_RS17110 PF02378 Phosphotransferase system, EIIC LI64_RS17115 PF00356 Bacterial regulatory proteins, lacI family LI64_RS17120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI64_RS17120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LI64_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS17125 PF03466 LysR substrate binding domain LI64_RS17130 PF01177 Asp/Glu/Hydantoin racemase LI64_RS17140 PF02706 Chain length determinant protein LI64_RS17145 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS17150 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS17155 PF03459 TOBE domain LI64_RS17155 PF00005 ABC transporter LI64_RS17155 PF17912 MalK OB fold domain LI64_RS17165 PF00083 Sugar (and other) transporter LI64_RS17175 PF04962 KduI/IolB family LI64_RS17180 PF14583 Oligogalacturonate lyase LI64_RS17185 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI64_RS17190 PF02803 Thiolase, C-terminal domain LI64_RS17190 PF00108 Thiolase, N-terminal domain LI64_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS17195 PF03466 LysR substrate binding domain LI64_RS17205 PF03222 Tryptophan/tyrosine permease family LI64_RS17210 PF14542 GCN5-related N-acetyl-transferase LI64_RS17215 PF06902 Divergent 4Fe-4S mono-cluster LI64_RS17220 PF10685 Stress-induced bacterial acidophilic repeat motif LI64_RS17225 PF05974 Domain of unknown function (DUF892) LI64_RS17230 PF05974 Domain of unknown function (DUF892) LI64_RS17235 PF05067 Manganese containing catalase LI64_RS17240 PF01654 Cytochrome bd terminal oxidase subunit I LI64_RS17245 PF02322 Cytochrome bd terminal oxidase subunit II LI64_RS17250 PF00128 Alpha amylase, catalytic domain LI64_RS17250 PF16657 Maltogenic Amylase, C-terminal domain LI64_RS17255 PF00561 alpha/beta hydrolase fold LI64_RS17255 PF00106 short chain dehydrogenase LI64_RS17260 PF02464 Competence-damaged protein LI64_RS17275 PF04076 Bacterial OB fold (BOF) protein LI64_RS17285 PF00753 Metallo-beta-lactamase superfamily LI64_RS17285 PF14864 Alkyl sulfatase C-terminal LI64_RS17285 PF14863 Alkyl sulfatase dimerisation LI64_RS17295 PF00691 OmpA family LI64_RS17295 PF01389 OmpA-like transmembrane domain LI64_RS17300 PF15977 Winged helix-turn-helix DNA binding LI64_RS17305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LI64_RS17325 PF01476 LysM domain LI64_RS17325 PF01551 Peptidase family M23 LI64_RS17330 PF00293 NUDIX domain LI64_RS17335 PF01336 OB-fold nucleic acid binding domain LI64_RS17335 PF00152 tRNA synthetases class II (D, K and N) LI64_RS17340 PF00472 RF-1 domain LI64_RS17340 PF03462 PCRF domain LI64_RS17350 PF01368 DHH family LI64_RS17350 PF17768 RecJ OB domain LI64_RS17350 PF02272 DHHA1 domain LI64_RS17355 PF10411 Disulfide bond isomerase protein N-terminus LI64_RS17355 PF13098 Thioredoxin-like domain LI64_RS17360 PF00589 Phage integrase family LI64_RS17360 PF02899 Phage integrase, N-terminal SAM-like domain LI64_RS17365 PF00258 Flavodoxin LI64_RS17370 PF07254 Membrane-bound toxin component of toxin-antitoxin system LI64_RS17375 PF03937 Flavinator of succinate dehydrogenase LI64_RS17380 PF01571 Aminomethyltransferase folate-binding domain LI64_RS17385 PF03006 Haemolysin-III related LI64_RS17390 PF01418 Helix-turn-helix domain, rpiR family LI64_RS17390 PF01380 SIS domain LI64_RS17395 PF00232 Glycosyl hydrolase family 1 LI64_RS17415 PF00578 AhpC/TSA family LI64_RS17425 PF02347 Glycine cleavage system P-protein LI64_RS17430 PF01597 Glycine cleavage H-protein LI64_RS17435 PF08669 Glycine cleavage T-protein C-terminal barrel domain LI64_RS17435 PF01571 Aminomethyltransferase folate-binding domain LI64_RS17440 PF01494 FAD binding domain LI64_RS17445 PF01494 FAD binding domain LI64_RS17450 PF05195 Aminopeptidase P, N-terminal domain LI64_RS17450 PF00557 Metallopeptidase family M24 LI64_RS17455 PF03695 Uncharacterised protein family (UPF0149) LI64_RS17460 PF05164 Cell division protein ZapA LI64_RS17465 PF01812 5-formyltetrahydrofolate cyclo-ligase family LI64_RS17470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI64_RS17470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS17470 PF01842 ACT domain LI64_RS17475 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LI64_RS17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS17480 PF03466 LysR substrate binding domain LI64_RS17485 PF04402 Protein of unknown function (DUF541) LI64_RS17490 PF01810 LysE type translocator LI64_RS17495 PF05552 Conserved TM helix LI64_RS17495 PF00924 Mechanosensitive ion channel LI64_RS17500 PF01116 Fructose-bisphosphate aldolase class-II LI64_RS17505 PF00162 Phosphoglycerate kinase LI64_RS17510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI64_RS17510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI64_RS17515 PF02780 Transketolase, C-terminal domain LI64_RS17515 PF02779 Transketolase, pyrimidine binding domain LI64_RS17515 PF00456 Transketolase, thiamine diphosphate binding domain LI64_RS17520 PF01435 Peptidase family M48 LI64_RS17525 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS17525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS17525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS17530 PF00171 Aldehyde dehydrogenase family LI64_RS17535 PF01958 Domain of unknown function DUF108 LI64_RS17535 PF03447 Homoserine dehydrogenase, NAD binding domain LI64_RS17545 PF12697 Alpha/beta hydrolase family LI64_RS17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS17560 PF14759 Reductase C-terminal LI64_RS17570 PF01614 Bacterial transcriptional regulator LI64_RS17570 PF09339 IclR helix-turn-helix domain LI64_RS17580 PF00355 Rieske [2Fe-2S] domain LI64_RS17590 PF00355 Rieske [2Fe-2S] domain LI64_RS17595 PF00491 Arginase family LI64_RS17600 PF17810 Arginine decarboxylase helical bundle domain LI64_RS17600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI64_RS17600 PF17944 Arginine decarboxylase C-terminal helical extension LI64_RS17605 PF00438 S-adenosylmethionine synthetase, N-terminal domain LI64_RS17605 PF02773 S-adenosylmethionine synthetase, C-terminal domain LI64_RS17605 PF02772 S-adenosylmethionine synthetase, central domain LI64_RS17625 PF13737 Transposase DDE domain LI64_RS17650 PF00083 Sugar (and other) transporter LI64_RS17655 PF17283 SprT-like zinc ribbon domain LI64_RS17655 PF10263 SprT-like family LI64_RS17660 PF04231 Endonuclease I LI64_RS17665 PF04452 RNA methyltransferase LI64_RS17670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LI64_RS17670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LI64_RS17675 PF02622 Uncharacterized ACR, COG1678 LI64_RS17680 PF03652 Holliday junction resolvase LI64_RS17685 PF00437 Type II/IV secretion system protein LI64_RS17690 PF01168 Alanine racemase, N-terminal domain LI64_RS17695 PF02325 YGGT family LI64_RS17700 PF02594 Uncharacterised ACR, YggU family COG1872 LI64_RS17705 PF01725 Ham1 family LI64_RS17710 PF06969 HemN C-terminal domain LI64_RS17710 PF04055 Radical SAM superfamily LI64_RS17715 PF04480 Protein of unknown function (DUF559) LI64_RS17720 PF11101 Protein of unknown function (DUF2884) LI64_RS17725 PF04320 Protein with unknown function (DUF469) LI64_RS17730 PF02390 Putative methyltransferase LI64_RS17735 PF14815 NUDIX domain LI64_RS17735 PF00730 HhH-GPD superfamily base excision DNA repair protein LI64_RS17735 PF00633 Helix-hairpin-helix motif LI64_RS17735 PF10576 Iron-sulfur binding domain of endonuclease III LI64_RS17740 PF04362 Bacterial Fe(2+) trafficking LI64_RS17745 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LI64_RS17745 PF01464 Transglycosylase SLT domain LI64_RS17750 PF03825 Nucleoside H+ symporter LI64_RS17755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI64_RS17755 PF01276 Orn/Lys/Arg decarboxylase, major domain LI64_RS17755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI64_RS17760 PF04474 Protein of unknown function (DUF554) LI64_RS17770 PF13609 Gram-negative porin LI64_RS17775 PF13737 Transposase DDE domain LI64_RS17785 PF01522 Polysaccharide deacetylase LI64_RS17785 PF14883 Hypothetical glycosyl hydrolase family 13 LI64_RS17790 PF00535 Glycosyl transferase family 2 LI64_RS17800 PF03738 Glutathionylspermidine synthase preATP-grasp LI64_RS17800 PF05257 CHAP domain LI64_RS17805 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS17815 PF00455 DeoR C terminal sensor domain LI64_RS17815 PF08220 DeoR-like helix-turn-helix domain LI64_RS17820 PF02203 Tar ligand binding domain homologue LI64_RS17820 PF00672 HAMP domain LI64_RS17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS17825 PF00248 Aldo/keto reductase family LI64_RS17830 PF03350 Uncharacterized protein family, UPF0114 LI64_RS17850 PF02472 Biopolymer transport protein ExbD/TolR LI64_RS17855 PF01618 MotA/TolQ/ExbB proton channel family LI64_RS17860 PF01053 Cys/Met metabolism PLP-dependent enzyme LI64_RS17865 PF09335 SNARE associated Golgi protein LI64_RS17870 PF06719 AraC-type transcriptional regulator N-terminus LI64_RS17870 PF12833 Helix-turn-helix domain LI64_RS17875 PF00465 Iron-containing alcohol dehydrogenase LI64_RS17880 PF00248 Aldo/keto reductase family LI64_RS17885 PF08497 Radical SAM N-terminal LI64_RS17885 PF04055 Radical SAM superfamily LI64_RS17885 PF11842 Domain of unknown function (DUF3362) LI64_RS17890 PF13737 Transposase DDE domain LI64_RS17905 PF03811 InsA N-terminal domain LI64_RS17905 PF12759 InsA C-terminal domain LI64_RS17910 PF03400 IS1 transposase LI64_RS17915 PF02583 Metal-sensitive transcriptional repressor LI64_RS17920 PF00107 Zinc-binding dehydrogenase LI64_RS17920 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS17930 PF00756 Putative esterase LI64_RS17940 PF00665 Integrase core domain LI64_RS17945 PF01527 Transposase LI64_RS17955 PF05717 IS66 Orf2 like protein LI64_RS17970 PF13737 Transposase DDE domain LI64_RS17975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI64_RS17975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS17980 PF12759 InsA C-terminal domain LI64_RS17980 PF03811 InsA N-terminal domain LI64_RS17985 PF03400 IS1 transposase LI64_RS17990 PF04542 Sigma-70 region 2 LI64_RS17990 PF08281 Sigma-70, region 4 LI64_RS17995 PF04773 FecR protein LI64_RS17995 PF16220 Domain of unknown function (DUF4880) LI64_RS18000 PF07660 Secretin and TonB N terminus short domain LI64_RS18000 PF00593 TonB dependent receptor LI64_RS18000 PF07715 TonB-dependent Receptor Plug Domain LI64_RS18005 PF01497 Periplasmic binding protein LI64_RS18010 PF01032 FecCD transport family LI64_RS18015 PF01032 FecCD transport family LI64_RS18020 PF00005 ABC transporter LI64_RS18025 PF05717 IS66 Orf2 like protein LI64_RS18040 PF02371 Transposase IS116/IS110/IS902 family LI64_RS18040 PF01548 Transposase LI64_RS18045 PF03960 ArsC family LI64_RS18050 PF02040 Arsenical pump membrane protein LI64_RS18055 PF01022 Bacterial regulatory protein, arsR family LI64_RS18060 PF03358 NADPH-dependent FMN reductase LI64_RS18075 PF00239 Resolvase, N terminal domain LI64_RS18075 PF02796 Helix-turn-helix domain of resolvase LI64_RS18080 PF13700 Domain of unknown function (DUF4158) LI64_RS18080 PF01526 Tn3 transposase DDE domain LI64_RS18090 PF01548 Transposase LI64_RS18090 PF02371 Transposase IS116/IS110/IS902 family LI64_RS18095 PF00107 Zinc-binding dehydrogenase LI64_RS18095 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS18100 PF00356 Bacterial regulatory proteins, lacI family LI64_RS18105 PF02837 Glycosyl hydrolases family 2, sugar binding domain LI64_RS18105 PF02929 Beta galactosidase small chain LI64_RS18105 PF16353 Domain of unknown function(DUF4981) LI64_RS18105 PF00703 Glycosyl hydrolases family 2 LI64_RS18105 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LI64_RS18110 PF01306 LacY proton/sugar symporter LI64_RS18115 PF12464 Maltose acetyltransferase LI64_RS18115 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS18120 PF03400 IS1 transposase LI64_RS18125 PF12759 InsA C-terminal domain LI64_RS18125 PF03811 InsA N-terminal domain LI64_RS18130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI64_RS18130 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS18135 PF13276 HTH-like domain LI64_RS18135 PF00665 Integrase core domain LI64_RS18135 PF13333 Integrase core domain LI64_RS18155 PF13737 Transposase DDE domain LI64_RS18180 PF11842 Domain of unknown function (DUF3362) LI64_RS18180 PF08497 Radical SAM N-terminal LI64_RS18180 PF04055 Radical SAM superfamily LI64_RS18185 PF02386 Cation transport protein LI64_RS18190 PF07732 Multicopper oxidase LI64_RS18190 PF07731 Multicopper oxidase LI64_RS18190 PF00394 Multicopper oxidase LI64_RS18195 PF01553 Acyltransferase LI64_RS18200 PF00521 DNA gyrase/topoisomerase IV, subunit A LI64_RS18200 PF03989 DNA gyrase C-terminal domain, beta-propeller LI64_RS18205 PF04076 Bacterial OB fold (BOF) protein LI64_RS18210 PF00486 Transcriptional regulatory protein, C terminal LI64_RS18210 PF00072 Response regulator receiver domain LI64_RS18215 PF08521 Two-component sensor kinase N-terminal LI64_RS18215 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS18220 PF02525 Flavodoxin-like fold LI64_RS18225 PF03992 Antibiotic biosynthesis monooxygenase LI64_RS18230 PF01476 LysM domain LI64_RS18230 PF04972 BON domain LI64_RS18235 PF07470 Glycosyl Hydrolase Family 88 LI64_RS18240 PF01306 LacY proton/sugar symporter LI64_RS18255 PF00204 DNA gyrase B LI64_RS18255 PF01751 Toprim domain LI64_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS18255 PF00986 DNA gyrase B subunit, carboxyl terminus LI64_RS18260 PF05728 Uncharacterised protein family (UPF0227) LI64_RS18265 PF00149 Calcineurin-like phosphoesterase LI64_RS18270 PF06853 Protein of unknown function (DUF1249) LI64_RS18275 PF00293 NUDIX domain LI64_RS18280 PF02321 Outer membrane efflux protein LI64_RS18285 PF06693 Protein of unknown function (DUF1190) LI64_RS18290 PF03738 Glutathionylspermidine synthase preATP-grasp LI64_RS18295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI64_RS18300 PF02535 ZIP Zinc transporter LI64_RS18305 PF00419 Fimbrial protein LI64_RS18310 PF00577 Outer membrane usher protein LI64_RS18310 PF13953 PapC C-terminal domain LI64_RS18310 PF13954 PapC N-terminal domain LI64_RS18315 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS18315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS18320 PF00419 Fimbrial protein LI64_RS18325 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LI64_RS18330 PF04380 Membrane fusogenic activity LI64_RS18335 PF00294 pfkB family carbohydrate kinase LI64_RS18335 PF01467 Cytidylyltransferase-like LI64_RS18340 PF08335 GlnD PII-uridylyltransferase LI64_RS18340 PF03710 Glutamate-ammonia ligase adenylyltransferase LI64_RS18345 PF01928 CYTH domain LI64_RS18350 PF08239 Bacterial SH3 domain LI64_RS18355 PF01966 HD domain LI64_RS18355 PF01743 Poly A polymerase head domain LI64_RS18355 PF12627 Probable RNA and SrmB- binding site of polymerase A LI64_RS18360 PF02673 Bacitracin resistance protein BacA LI64_RS18365 PF02152 Dihydroneopterin aldolase LI64_RS18370 PF02660 Glycerol-3-phosphate acyltransferase LI64_RS18375 PF01774 UreD urease accessory protein LI64_RS18380 PF00547 Urease, gamma subunit LI64_RS18385 PF00699 Urease beta subunit LI64_RS18390 PF01979 Amidohydrolase family LI64_RS18390 PF00449 Urease alpha-subunit, N-terminal domain LI64_RS18395 PF02814 UreE urease accessory protein, N-terminal domain LI64_RS18395 PF05194 UreE urease accessory protein, C-terminal domain LI64_RS18405 PF01730 UreF LI64_RS18410 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI64_RS18420 PF00072 Response regulator receiver domain LI64_RS18420 PF00196 Bacterial regulatory proteins, luxR family LI64_RS18425 PF00814 Glycoprotease family LI64_RS18430 PF01165 Ribosomal protein S21 LI64_RS18435 PF10410 DnaB-helicase binding domain of primase LI64_RS18435 PF08278 DNA primase DnaG DnaB-binding LI64_RS18435 PF08275 DNA primase catalytic core, N-terminal domain LI64_RS18435 PF01807 CHC2 zinc finger LI64_RS18440 PF04539 Sigma-70 region 3 LI64_RS18440 PF04545 Sigma-70, region 4 LI64_RS18440 PF04542 Sigma-70 region 2 LI64_RS18440 PF00140 Sigma-70 factor, region 1.2 LI64_RS18440 PF04546 Sigma-70, non-essential region LI64_RS18440 PF03979 Sigma-70 factor, region 1.1 LI64_RS18445 PF03167 Uracil DNA glycosylase superfamily LI64_RS18470 PF03354 Phage Terminase LI64_RS18545 PF10548 P22AR C-terminal domain LI64_RS18545 PF08346 AntA/AntB antirepressor LI64_RS18555 PF00589 Phage integrase family LI64_RS18560 PF13276 HTH-like domain LI64_RS18560 PF13683 Integrase core domain LI64_RS18565 PF01527 Transposase LI64_RS18580 PF05860 haemagglutination activity domain LI64_RS18580 PF13018 Extended Signal Peptide of Type V secretion system LI64_RS18580 PF04829 Pre-toxin domain with VENN motif LI64_RS18580 PF13332 Hemagglutinin repeat LI64_RS18595 PF04829 Pre-toxin domain with VENN motif LI64_RS18595 PF05594 Haemagluttinin repeat LI64_RS18595 PF13332 Hemagglutinin repeat LI64_RS18595 PF15526 Novel toxin 21 LI64_RS18595 PF05860 haemagglutination activity domain LI64_RS18600 PF08479 POTRA domain, ShlB-type LI64_RS18600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LI64_RS18600 PF17287 POTRA domain LI64_RS18610 PF04954 Siderophore-interacting protein LI64_RS18610 PF08021 Siderophore-interacting FAD-binding domain LI64_RS18615 PF03551 Transcriptional regulator PadR-like family LI64_RS18620 PF00672 HAMP domain LI64_RS18620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS18620 PF02203 Tar ligand binding domain homologue LI64_RS18625 PF08447 PAS fold LI64_RS18625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI64_RS18630 PF00202 Aminotransferase class-III LI64_RS18645 PF03992 Antibiotic biosynthesis monooxygenase LI64_RS18650 PF01791 DeoC/LacD family aldolase LI64_RS18655 PF13407 Periplasmic binding protein domain LI64_RS18660 PF02653 Branched-chain amino acid transport system / permease component LI64_RS18665 PF02653 Branched-chain amino acid transport system / permease component LI64_RS18670 PF00005 ABC transporter LI64_RS18675 PF04198 Putative sugar-binding domain LI64_RS18680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS18680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS18685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS18685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI64_RS18690 PF05175 Methyltransferase small domain LI64_RS18695 PF01863 Protein of unknown function DUF45 LI64_RS18700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS18705 PF03741 Integral membrane protein TerC family LI64_RS18710 PF00375 Sodium:dicarboxylate symporter family LI64_RS18715 PF08666 SAF domain LI64_RS18715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LI64_RS18720 PF02614 Glucuronate isomerase LI64_RS18725 PF07690 Major Facilitator Superfamily LI64_RS18730 PF07729 FCD domain LI64_RS18730 PF00392 Bacterial regulatory proteins, gntR family LI64_RS18735 PF09335 SNARE associated Golgi protein LI64_RS18740 PF13721 SecD export protein N-terminal TM region LI64_RS18745 PF06476 Protein of unknown function (DUF1090) LI64_RS18750 PF05957 Bacterial protein of unknown function (DUF883) LI64_RS18755 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LI64_RS18760 PF13997 YqjK-like protein LI64_RS18765 PF07681 DoxX LI64_RS18770 PF13409 Glutathione S-transferase, N-terminal domain LI64_RS18775 PF05656 Protein of unknown function (DUF805) LI64_RS18780 PF03466 LysR substrate binding domain LI64_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS18785 PF02678 Pirin LI64_RS18785 PF17954 Quercetinase C-terminal cupin domain LI64_RS18790 PF03313 Serine dehydratase alpha chain LI64_RS18800 PF01228 Glycine radical LI64_RS18800 PF02901 Pyruvate formate lyase-like LI64_RS18805 PF00871 Acetokinase family LI64_RS18810 PF03222 Tryptophan/tyrosine permease family LI64_RS18815 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS18820 PF03466 LysR substrate binding domain LI64_RS18825 PF02595 Glycerate kinase family LI64_RS18830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI64_RS18830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI64_RS18835 PF03328 HpcH/HpaI aldolase/citrate lyase family LI64_RS18840 PF08666 SAF domain LI64_RS18840 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LI64_RS18845 PF01116 Fructose-bisphosphate aldolase class-II LI64_RS18850 PF08013 Tagatose 6 phosphate kinase LI64_RS18855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS18860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS18865 PF03611 PTS system sugar-specific permease component LI64_RS18870 PF00107 Zinc-binding dehydrogenase LI64_RS18870 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS18875 PF08220 DeoR-like helix-turn-helix domain LI64_RS18880 PF13784 Fic/DOC family N-terminal LI64_RS18880 PF02661 Fic/DOC family LI64_RS18885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI64_RS18890 PF04348 LppC putative lipoprotein LI64_RS18895 PF02021 Uncharacterised protein family UPF0102 LI64_RS18900 PF13580 SIS domain LI64_RS18905 PF04972 BON domain LI64_RS18910 PF03773 Predicted permease LI64_RS18915 PF13460 NAD(P)H-binding LI64_RS18920 PF01965 DJ-1/PfpI family LI64_RS18930 PF01541 GIY-YIG catalytic domain LI64_RS18935 PF13508 Acetyltransferase (GNAT) domain LI64_RS18940 PF02036 SCP-2 sterol transfer family LI64_RS18945 PF01136 Peptidase family U32 LI64_RS18950 PF01136 Peptidase family U32 LI64_RS18955 PF00296 Luciferase-like monooxygenase LI64_RS18960 PF00665 Integrase core domain LI64_RS18965 PF03222 Tryptophan/tyrosine permease family LI64_RS18970 PF03880 DbpA RNA binding domain LI64_RS18970 PF00270 DEAD/DEAH box helicase LI64_RS18970 PF12343 Cold shock protein DEAD box A LI64_RS18970 PF00271 Helicase conserved C-terminal domain LI64_RS18975 PF07719 Tetratricopeptide repeat LI64_RS18975 PF13181 Tetratricopeptide repeat LI64_RS18980 PF01138 3' exoribonuclease family, domain 1 LI64_RS18980 PF00575 S1 RNA binding domain LI64_RS18980 PF03725 3' exoribonuclease family, domain 2 LI64_RS18980 PF00013 KH domain LI64_RS18980 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LI64_RS18985 PF00312 Ribosomal protein S15 LI64_RS18990 PF09157 Pseudouridine synthase II TruB, C-terminal LI64_RS18990 PF16198 tRNA pseudouridylate synthase B C-terminal domain LI64_RS18990 PF01509 TruB family pseudouridylate synthase (N terminal domain) LI64_RS18995 PF02033 Ribosome-binding factor A LI64_RS19000 PF11987 Translation-initiation factor 2 LI64_RS19000 PF04760 Translation initiation factor IF-2, N-terminal region LI64_RS19000 PF00009 Elongation factor Tu GTP binding domain LI64_RS19000 PF08364 Bacterial translation initiation factor IF-2 associated region LI64_RS19005 PF08529 NusA N-terminal domain LI64_RS19005 PF13184 NusA-like KH domain LI64_RS19010 PF17384 RimP C-terminal SH3 domain LI64_RS19010 PF02576 RimP N-terminal domain LI64_RS19020 PF00764 Arginosuccinate synthase LI64_RS19030 PF03840 Preprotein translocase SecG subunit LI64_RS19035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI64_RS19035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI64_RS19035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI64_RS19035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI64_RS19040 PF00809 Pterin binding enzyme LI64_RS19045 PF06480 FtsH Extracellular LI64_RS19045 PF01434 Peptidase family M41 LI64_RS19045 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS19045 PF17862 AAA+ lid domain LI64_RS19050 PF01728 FtsJ-like methyltransferase LI64_RS19055 PF01985 CRS1 / YhbY (CRM) domain LI64_RS19060 PF01272 Transcription elongation factor, GreA/GreB, C-term LI64_RS19060 PF03449 Transcription elongation factor, N-terminal LI64_RS19065 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LI64_RS19070 PF00072 Response regulator receiver domain LI64_RS19070 PF00486 Transcriptional regulatory protein, C terminal LI64_RS19075 PF00672 HAMP domain LI64_RS19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS19075 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS19080 PF01926 50S ribosome-binding GTPase LI64_RS19080 PF01018 GTP1/OBG LI64_RS19085 PF00892 EamA-like transporter family LI64_RS19090 PF01016 Ribosomal L27 protein LI64_RS19095 PF00829 Ribosomal prokaryotic L21 protein LI64_RS19100 PF00348 Polyprenyl synthetase LI64_RS19105 PF13693 Winged helix-turn-helix DNA-binding LI64_RS19110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI64_RS19115 PF01722 BolA-like protein LI64_RS19120 PF13466 STAS domain LI64_RS19125 PF05494 MlaC protein LI64_RS19130 PF02470 MlaD protein LI64_RS19135 PF02405 Permease MlaE LI64_RS19140 PF00005 ABC transporter LI64_RS19145 PF01699 Sodium/calcium exchanger protein LI64_RS19150 PF01380 SIS domain LI64_RS19150 PF00571 CBS domain LI64_RS19160 PF06835 Lipopolysaccharide-assembly, LptC-related LI64_RS19165 PF03968 OstA-like protein LI64_RS19170 PF00005 ABC transporter LI64_RS19170 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI64_RS19175 PF00309 Sigma-54 factor, Activator interacting domain (AID) LI64_RS19175 PF04963 Sigma-54 factor, core binding domain LI64_RS19175 PF04552 Sigma-54, DNA binding domain LI64_RS19180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LI64_RS19185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS19190 PF03668 P-loop ATPase protein family LI64_RS19195 PF00381 PTS HPr component phosphorylation site LI64_RS19200 PF00912 Transglycosylase LI64_RS19210 PF00072 Response regulator receiver domain LI64_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS19210 PF01627 Hpt domain LI64_RS19210 PF18415 Histidine kinase receptor ArcB trans-membrane domain LI64_RS19210 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS19210 PF00989 PAS fold LI64_RS19215 PF03739 Lipopolysaccharide export system permease LptF/LptG LI64_RS19220 PF03739 Lipopolysaccharide export system permease LptF/LptG LI64_RS19225 PF00883 Cytosol aminopeptidase family, catalytic domain LI64_RS19225 PF02789 Cytosol aminopeptidase family, N-terminal domain LI64_RS19230 PF04364 DNA polymerase III chi subunit, HolC LI64_RS19235 PF00133 tRNA synthetases class I (I, L, M and V) LI64_RS19235 PF08264 Anticodon-binding domain of tRNA LI64_RS19235 PF10458 Valyl tRNA synthetase tRNA binding arm LI64_RS19240 PF00583 Acetyltransferase (GNAT) family LI64_RS19245 PF00107 Zinc-binding dehydrogenase LI64_RS19245 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS19250 PF02733 Dak1 domain LI64_RS19250 PF02734 DAK2 domain LI64_RS19255 PF05872 Bacterial protein of unknown function (DUF853) LI64_RS19260 PF04055 Radical SAM superfamily LI64_RS19260 PF16199 Radical_SAM C-terminal domain LI64_RS19265 PF04898 Glutamate synthase central domain LI64_RS19265 PF00310 Glutamine amidotransferases class-II LI64_RS19265 PF01493 GXGXG motif LI64_RS19265 PF01645 Conserved region in glutamate synthase LI64_RS19270 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS19270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI64_RS19280 PF00577 Outer membrane usher protein LI64_RS19280 PF13954 PapC N-terminal domain LI64_RS19280 PF13953 PapC C-terminal domain LI64_RS19285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS19290 PF04386 Stringent starvation protein B LI64_RS19295 PF02798 Glutathione S-transferase, N-terminal domain LI64_RS19295 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS19300 PF00380 Ribosomal protein S9/S16 LI64_RS19305 PF00572 Ribosomal protein L13 LI64_RS19310 PF03969 AFG1-like ATPase LI64_RS19315 PF06295 Protein of unknown function (DUF1043) LI64_RS19320 PF13180 PDZ domain LI64_RS19320 PF00595 PDZ domain LI64_RS19325 PF13180 PDZ domain LI64_RS19330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LI64_RS19330 PF00056 lactate/malate dehydrogenase, NAD binding domain LI64_RS19335 PF01316 Arginine repressor, DNA binding domain LI64_RS19335 PF02863 Arginine repressor, C-terminal domain LI64_RS19340 PF07338 Protein of unknown function (DUF1471) LI64_RS19345 PF01337 Barstar (barnase inhibitor) LI64_RS19350 PF00171 Aldehyde dehydrogenase family LI64_RS19355 PF04632 Fusaric acid resistance protein family LI64_RS19360 PF13533 Biotin-lipoyl like LI64_RS19365 PF07869 Protein of unknown function (DUF1656) LI64_RS19370 PF03466 LysR substrate binding domain LI64_RS19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS19375 PF01523 Putative modulator of DNA gyrase LI64_RS19380 PF13502 AsmA-like C-terminal region LI64_RS19380 PF13116 Protein of unknown function LI64_RS19385 PF10150 Ribonuclease E/G family LI64_RS19385 PF00575 S1 RNA binding domain LI64_RS19390 PF02545 Maf-like protein LI64_RS19395 PF04093 rod shape-determining protein MreD LI64_RS19400 PF04085 rod shape-determining protein MreC LI64_RS19410 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS19410 PF17157 Gammaproteobacterial periplasmic sensor domain LI64_RS19410 PF00563 EAL domain LI64_RS19415 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS19415 PF00107 Zinc-binding dehydrogenase LI64_RS19420 PF00174 Oxidoreductase molybdopterin binding domain LI64_RS19425 PF01794 Ferric reductase like transmembrane component LI64_RS19430 PF01220 Dehydroquinase class II LI64_RS19435 PF00364 Biotin-requiring enzyme LI64_RS19440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI64_RS19440 PF02785 Biotin carboxylase C-terminal domain LI64_RS19440 PF00289 Biotin carboxylase, N-terminal domain LI64_RS19445 PF06196 Protein of unknown function (DUF997) LI64_RS19450 PF00474 Sodium:solute symporter family LI64_RS19460 PF00194 Eukaryotic-type carbonic anhydrase LI64_RS19465 PF01207 Dihydrouridine synthase (Dus) LI64_RS19470 PF02954 Bacterial regulatory protein, Fis family LI64_RS19475 PF10831 Protein of unknown function (DUF2556) LI64_RS19480 PF00563 EAL domain LI64_RS19480 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS19480 PF03707 Bacterial signalling protein N terminal repeat LI64_RS19485 PF00440 Bacterial regulatory proteins, tetR family LI64_RS19485 PF08361 MAATS-type transcriptional repressor, C-terminal region LI64_RS19490 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS19490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS19495 PF00873 AcrB/AcrD/AcrF family LI64_RS19535 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS19540 PF07369 Protein of unknown function (DUF1488) LI64_RS19545 PF08501 Shikimate dehydrogenase substrate binding domain LI64_RS19545 PF01488 Shikimate / quinate 5-dehydrogenase LI64_RS19545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LI64_RS19550 PF01300 Telomere recombination LI64_RS19555 PF01396 Topoisomerase DNA binding C4 zinc finger LI64_RS19560 PF04361 Protein of unknown function (DUF494) LI64_RS19565 PF17782 DprA winged helix domain LI64_RS19565 PF02481 DNA recombination-mediator protein A LI64_RS19570 PF01327 Polypeptide deformylase LI64_RS19575 PF02911 Formyl transferase, C-terminal domain LI64_RS19575 PF00551 Formyl transferase LI64_RS19580 PF01189 16S rRNA methyltransferase RsmB/F LI64_RS19580 PF01029 NusB family LI64_RS19585 PF02254 TrkA-N domain LI64_RS19585 PF02080 TrkA-C domain LI64_RS19590 PF01741 Large-conductance mechanosensitive channel, MscL LI64_RS19595 PF03889 Alternative ribosome-rescue factor A LI64_RS19600 PF13411 MerR HTH family regulatory protein LI64_RS19605 PF09350 Domain of unknown function (DUF1992) LI64_RS19610 PF01196 Ribosomal protein L17 LI64_RS19615 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LI64_RS19615 PF01000 RNA polymerase Rpb3/RpoA insert domain LI64_RS19615 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LI64_RS19620 PF01479 S4 domain LI64_RS19620 PF00163 Ribosomal protein S4/S9 N-terminal domain LI64_RS19625 PF00411 Ribosomal protein S11 LI64_RS19630 PF00416 Ribosomal protein S13/S18 LI64_RS19635 PF00444 Ribosomal protein L36 LI64_RS19640 PF00344 SecY translocase LI64_RS19645 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LI64_RS19650 PF00327 Ribosomal protein L30p/L7e LI64_RS19655 PF03719 Ribosomal protein S5, C-terminal domain LI64_RS19655 PF00333 Ribosomal protein S5, N-terminal domain LI64_RS19660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LI64_RS19665 PF00347 Ribosomal protein L6 LI64_RS19670 PF00410 Ribosomal protein S8 LI64_RS19675 PF00253 Ribosomal protein S14p/S29e LI64_RS19680 PF00281 Ribosomal protein L5 LI64_RS19680 PF00673 ribosomal L5P family C-terminus LI64_RS19685 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LI64_RS19685 PF00467 KOW motif LI64_RS19690 PF00238 Ribosomal protein L14p/L23e LI64_RS19695 PF00366 Ribosomal protein S17 LI64_RS19700 PF00831 Ribosomal L29 protein LI64_RS19705 PF00252 Ribosomal protein L16p/L10e LI64_RS19710 PF00189 Ribosomal protein S3, C-terminal domain LI64_RS19710 PF07650 KH domain LI64_RS19715 PF00237 Ribosomal protein L22p/L17e LI64_RS19720 PF00203 Ribosomal protein S19 LI64_RS19725 PF00181 Ribosomal Proteins L2, RNA binding domain LI64_RS19725 PF03947 Ribosomal Proteins L2, C-terminal domain LI64_RS19730 PF00276 Ribosomal protein L23 LI64_RS19735 PF00573 Ribosomal protein L4/L1 family LI64_RS19740 PF00297 Ribosomal protein L3 LI64_RS19745 PF00338 Ribosomal protein S10p/S20e LI64_RS19750 PF01478 Type IV leader peptidase family LI64_RS19755 PF00210 Ferritin-like domain LI64_RS19760 PF04324 BFD-like [2Fe-2S] binding domain LI64_RS19765 PF00009 Elongation factor Tu GTP binding domain LI64_RS19765 PF03144 Elongation factor Tu domain 2 LI64_RS19765 PF03143 Elongation factor Tu C-terminal domain LI64_RS19770 PF00679 Elongation factor G C-terminus LI64_RS19770 PF14492 Elongation Factor G, domain II LI64_RS19770 PF00009 Elongation factor Tu GTP binding domain LI64_RS19770 PF03764 Elongation factor G, domain IV LI64_RS19770 PF03144 Elongation factor Tu domain 2 LI64_RS19775 PF00177 Ribosomal protein S7p/S5e LI64_RS19780 PF00164 Ribosomal protein S12/S23 LI64_RS19785 PF04077 DsrH like protein LI64_RS19790 PF02635 DsrE/DsrF-like family LI64_RS19795 PF02635 DsrE/DsrF-like family LI64_RS19800 PF08348 YheO-like PAS domain LI64_RS19800 PF13309 HTH domain LI64_RS19805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI64_RS19805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LI64_RS19810 PF04102 SlyX LI64_RS19815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI64_RS19820 PF09526 Probable metal-binding protein (DUF2387) LI64_RS19825 PF00999 Sodium/hydrogen exchanger family LI64_RS19825 PF02254 TrkA-N domain LI64_RS19830 PF02525 Flavodoxin-like fold LI64_RS19835 PF12848 ABC transporter LI64_RS19835 PF00005 ABC transporter LI64_RS19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS19840 PF03466 LysR substrate binding domain LI64_RS19845 PF00698 Acyl transferase domain LI64_RS19850 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LI64_RS19855 PF03547 Membrane transport protein LI64_RS19865 PF01039 Carboxyl transferase domain LI64_RS19870 PF06857 Malonate decarboxylase delta subunit (MdcD) LI64_RS19875 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LI64_RS19880 PF16957 Malonate decarboxylase, alpha subunit, transporter LI64_RS19890 PF00561 alpha/beta hydrolase fold LI64_RS19895 PF06794 Uncharacterised protein family (UPF0270) LI64_RS19900 PF00485 Phosphoribulokinase / Uridine kinase family LI64_RS19905 PF02566 OsmC-like protein LI64_RS19910 PF00027 Cyclic nucleotide-binding domain LI64_RS19910 PF13545 Crp-like helix-turn-helix domain LI64_RS19915 PF12805 FUSC-like inner membrane protein yccS LI64_RS19920 PF00202 Aminotransferase class-III LI64_RS19925 PF00117 Glutamine amidotransferase class-I LI64_RS19930 PF02661 Fic/DOC family LI64_RS19935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI64_RS19940 PF07690 Major Facilitator Superfamily LI64_RS19950 PF04324 BFD-like [2Fe-2S] binding domain LI64_RS19950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI64_RS19950 PF18267 Rubredoxin NAD+ reductase C-terminal domain LI64_RS19950 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS19950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI64_RS19955 PF13806 Rieske-like [2Fe-2S] domain LI64_RS19960 PF14824 Sirohaem biosynthesis protein central LI64_RS19960 PF10414 Sirohaem synthase dimerisation region LI64_RS19960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI64_RS19965 PF13978 Protein of unknown function (DUF4223) LI64_RS19970 PF00579 tRNA synthetases class I (W and Y) LI64_RS19975 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS19980 PF00834 Ribulose-phosphate 3 epimerase family LI64_RS19985 PF02086 D12 class N6 adenine-specific DNA methyltransferase LI64_RS19990 PF05036 Sporulation related domain LI64_RS19995 PF01761 3-dehydroquinate synthase LI64_RS20000 PF01202 Shikimate kinase LI64_RS20010 PF03958 Bacterial type II/III secretion system short domain LI64_RS20010 PF00263 Bacterial type II and III secretion system protein LI64_RS20035 PF00912 Transglycosylase LI64_RS20035 PF00905 Penicillin binding protein transpeptidase domain LI64_RS20035 PF17092 Penicillin-binding protein OB-like domain LI64_RS20040 PF00293 NUDIX domain LI64_RS20050 PF07095 Intracellular growth attenuator protein IgaA LI64_RS20055 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS20060 PF01479 S4 domain LI64_RS20065 PF01430 Hsp33 protein LI64_RS20070 PF01293 Phosphoenolpyruvate carboxykinase LI64_RS20075 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS20075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS20075 PF00672 HAMP domain LI64_RS20080 PF00486 Transcriptional regulatory protein, C terminal LI64_RS20080 PF00072 Response regulator receiver domain LI64_RS20085 PF03449 Transcription elongation factor, N-terminal LI64_RS20085 PF01272 Transcription elongation factor, GreA/GreB, C-term LI64_RS20090 PF00575 S1 RNA binding domain LI64_RS20090 PF17674 HHH domain LI64_RS20090 PF09371 Tex-like protein N-terminal domain LI64_RS20090 PF16921 Tex protein YqgF-like domain LI64_RS20095 PF04023 FeoA domain LI64_RS20100 PF02421 Ferrous iron transport protein B LI64_RS20100 PF17910 FeoB cytosolic helical domain LI64_RS20100 PF07664 Ferrous iron transport protein B C terminus LI64_RS20100 PF07670 Nucleoside recognition LI64_RS20105 PF09012 FeoC like transcriptional regulator LI64_RS20110 PF00561 alpha/beta hydrolase fold LI64_RS20115 PF00156 Phosphoribosyl transferase domain LI64_RS20120 PF01521 Iron-sulphur cluster biosynthesis LI64_RS20120 PF01106 NifU-like domain LI64_RS20125 PF02447 GntP family permease LI64_RS20130 PF02446 4-alpha-glucanotransferase LI64_RS20135 PF00343 Carbohydrate phosphorylase LI64_RS20140 PF00196 Bacterial regulatory proteins, luxR family LI64_RS20140 PF17874 MalT-like TPR region LI64_RS20145 PF00455 DeoR C terminal sensor domain LI64_RS20145 PF08220 DeoR-like helix-turn-helix domain LI64_RS20150 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LI64_RS20150 PF01694 Rhomboid family LI64_RS20155 PF00581 Rhodanese-like domain LI64_RS20165 PF01266 FAD dependent oxidoreductase LI64_RS20165 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LI64_RS20170 PF00343 Carbohydrate phosphorylase LI64_RS20175 PF08323 Starch synthase catalytic domain LI64_RS20175 PF00534 Glycosyl transferases group 1 LI64_RS20180 PF00483 Nucleotidyl transferase LI64_RS20185 PF18390 Glycogen debranching enzyme C-terminal domain LI64_RS20185 PF00128 Alpha amylase, catalytic domain LI64_RS20185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI64_RS20190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI64_RS20190 PF02806 Alpha amylase, C-terminal all-beta domain LI64_RS20190 PF00128 Alpha amylase, catalytic domain LI64_RS20195 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI64_RS20195 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI64_RS20205 PF01914 MarC family integral membrane protein LI64_RS20210 PF02447 GntP family permease LI64_RS20215 PF01202 Shikimate kinase LI64_RS20220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI64_RS20220 PF00356 Bacterial regulatory proteins, lacI family LI64_RS20225 PF17954 Quercetinase C-terminal cupin domain LI64_RS20225 PF02678 Pirin LI64_RS20230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI64_RS20230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI64_RS20235 PF00583 Acetyltransferase (GNAT) family LI64_RS20245 PF10956 Protein of unknown function (DUF2756) LI64_RS20250 PF03009 Glycerophosphoryl diester phosphodiesterase family LI64_RS20255 PF00005 ABC transporter LI64_RS20255 PF17912 MalK OB fold domain LI64_RS20260 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS20265 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS20270 PF13416 Bacterial extracellular solute-binding protein LI64_RS20275 PF00005 ABC transporter LI64_RS20280 PF00005 ABC transporter LI64_RS20280 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI64_RS20285 PF02653 Branched-chain amino acid transport system / permease component LI64_RS20285 PF11862 Domain of unknown function (DUF3382) LI64_RS20290 PF02653 Branched-chain amino acid transport system / permease component LI64_RS20295 PF13458 Periplasmic binding protein LI64_RS20310 PF12568 Acetyltransferase (GNAT) domain, PanZ LI64_RS20315 PF13458 Periplasmic binding protein LI64_RS20320 PF00202 Aminotransferase class-III LI64_RS20325 PF04542 Sigma-70 region 2 LI64_RS20325 PF00140 Sigma-70 factor, region 1.2 LI64_RS20325 PF04545 Sigma-70, region 4 LI64_RS20330 PF18075 FtsX extracellular domain LI64_RS20330 PF02687 FtsX-like permease family LI64_RS20335 PF00005 ABC transporter LI64_RS20340 PF00448 SRP54-type protein, GTPase domain LI64_RS20340 PF02881 SRP54-type protein, helical bundle domain LI64_RS20350 PF06611 Protein of unknown function (DUF1145) LI64_RS20355 PF10694 Protein of unknown function (DUF2500) LI64_RS20360 PF07947 YhhN family LI64_RS20365 PF00403 Heavy-metal-associated domain LI64_RS20370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LI64_RS20380 PF03480 Bacterial extracellular solute-binding protein, family 7 LI64_RS20385 PF01206 Sulfurtransferase TusA LI64_RS20390 PF02592 Putative vitamin uptake transporter LI64_RS20395 PF08786 DcrB LI64_RS20400 PF01594 AI-2E family transporter LI64_RS20415 PF00550 Phosphopantetheine attachment site LI64_RS20420 PF00550 Phosphopantetheine attachment site LI64_RS20440 PF00535 Glycosyl transferase family 2 LI64_RS20465 PF00109 Beta-ketoacyl synthase, N-terminal domain LI64_RS20465 PF02801 Beta-ketoacyl synthase, C-terminal domain LI64_RS20480 PF02801 Beta-ketoacyl synthase, C-terminal domain LI64_RS20480 PF00109 Beta-ketoacyl synthase, N-terminal domain LI64_RS20485 PF01648 4'-phosphopantetheinyl transferase superfamily LI64_RS20490 PF05870 Phenolic acid decarboxylase (PAD) LI64_RS20495 PF03466 LysR substrate binding domain LI64_RS20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS20500 PF00106 short chain dehydrogenase LI64_RS20510 PF03741 Integral membrane protein TerC family LI64_RS20515 PF07690 Major Facilitator Superfamily LI64_RS20520 PF09339 IclR helix-turn-helix domain LI64_RS20520 PF01614 Bacterial transcriptional regulator LI64_RS20525 PF03737 Aldolase/RraA LI64_RS20530 PF01842 ACT domain LI64_RS20530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI64_RS20530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI64_RS20545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS20545 PF00672 HAMP domain LI64_RS20545 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS20550 PF00486 Transcriptional regulatory protein, C terminal LI64_RS20550 PF00072 Response regulator receiver domain LI64_RS20555 PF05425 Copper resistance protein D LI64_RS20560 PF04234 CopC domain LI64_RS20565 PF05275 Copper resistance protein B precursor (CopB) LI64_RS20570 PF07732 Multicopper oxidase LI64_RS20570 PF07731 Multicopper oxidase LI64_RS20570 PF00394 Multicopper oxidase LI64_RS20580 PF01551 Peptidase family M23 LI64_RS20580 PF08525 Opacity-associated protein A N-terminal motif LI64_RS20580 PF01476 LysM domain LI64_RS20590 PF04945 YHS domain LI64_RS20600 PF00873 AcrB/AcrD/AcrF family LI64_RS20605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS20610 PF11604 Copper binding periplasmic protein CusF LI64_RS20615 PF02321 Outer membrane efflux protein LI64_RS20625 PF00486 Transcriptional regulatory protein, C terminal LI64_RS20625 PF00072 Response regulator receiver domain LI64_RS20630 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS20630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS20630 PF00672 HAMP domain LI64_RS20670 PF13401 AAA domain LI64_RS20670 PF11426 Tn7 transposition regulator TnsC LI64_RS20675 PF00665 Integrase core domain LI64_RS20685 PF13737 Transposase DDE domain LI64_RS20700 PF01384 Phosphate transporter family LI64_RS20705 PF10625 Universal stress protein B (UspB) LI64_RS20710 PF00582 Universal stress protein family LI64_RS20715 PF04445 Putative SAM-dependent methyltransferase LI64_RS20720 PF01432 Peptidase family M3 LI64_RS20725 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LI64_RS20730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS20730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI64_RS20740 PF01204 Trehalase LI64_RS20760 PF00196 Bacterial regulatory proteins, luxR family LI64_RS20770 PF03466 LysR substrate binding domain LI64_RS20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS20775 PF03631 Virulence factor BrkB LI64_RS20780 PF00083 Sugar (and other) transporter LI64_RS20780 PF07690 Major Facilitator Superfamily LI64_RS20785 PF05170 AsmA family LI64_RS20790 PF00563 EAL domain LI64_RS20795 PF00294 pfkB family carbohydrate kinase LI64_RS20800 PF00675 Insulinase (Peptidase family M16) LI64_RS20800 PF05193 Peptidase M16 inactive domain LI64_RS20805 PF00375 Sodium:dicarboxylate symporter family LI64_RS20810 PF00672 HAMP domain LI64_RS20810 PF00563 EAL domain LI64_RS20810 PF00990 Diguanylate cyclase, GGDEF domain LI64_RS20810 PF17154 Gammaproteobacterial periplasmic sensor domain LI64_RS20815 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LI64_RS20820 PF01270 Glycosyl hydrolases family 8 LI64_RS20825 PF03170 Bacterial cellulose synthase subunit LI64_RS20835 PF06564 Cellulose biosynthesis protein BcsQ LI64_RS20840 PF10945 Cellulose biosynthesis protein BcsR LI64_RS20845 PF10995 Cellulose biosynthesis GIL LI64_RS20850 PF11120 Cellulose biosynthesis protein BcsF LI64_RS20855 PF11658 Cellulose biosynthesis protein BcsG LI64_RS20860 PF03099 Biotin/lipoate A/B protein ligase family LI64_RS20860 PF08279 HTH domain LI64_RS20860 PF02237 Biotin protein ligase C terminal domain LI64_RS20865 PF01565 FAD binding domain LI64_RS20865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LI64_RS20895 PF12724 Flavodoxin domain LI64_RS20900 PF02386 Cation transport protein LI64_RS20905 PF01205 Uncharacterized protein family UPF0029 LI64_RS20905 PF09186 Domain of unknown function (DUF1949) LI64_RS20910 PF00557 Metallopeptidase family M24 LI64_RS20915 PF00378 Enoyl-CoA hydratase/isomerase LI64_RS20915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI64_RS20915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI64_RS20920 PF00108 Thiolase, N-terminal domain LI64_RS20920 PF02803 Thiolase, C-terminal domain LI64_RS20925 PF05746 DALR anticodon binding domain LI64_RS20925 PF02092 Glycyl-tRNA synthetase beta subunit LI64_RS20930 PF02091 Glycyl-tRNA synthetase alpha subunit LI64_RS20935 PF13983 YsaB-like lipoprotein LI64_RS20940 PF01757 Acyltransferase family LI64_RS20945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS20945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS20955 PF13407 Periplasmic binding protein domain LI64_RS20960 PF00005 ABC transporter LI64_RS20965 PF02653 Branched-chain amino acid transport system / permease component LI64_RS20970 PF12833 Helix-turn-helix domain LI64_RS20975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LI64_RS20980 PF00128 Alpha amylase, catalytic domain LI64_RS20985 PF00155 Aminotransferase class I and II LI64_RS20990 PF13247 4Fe-4S dicluster domain LI64_RS20995 PF02311 AraC-like ligand binding domain LI64_RS20995 PF12833 Helix-turn-helix domain LI64_RS21005 PF07944 Beta-L-arabinofuranosidase, GH127 LI64_RS21010 PF00171 Aldehyde dehydrogenase family LI64_RS21015 PF00480 ROK family LI64_RS21020 PF03144 Elongation factor Tu domain 2 LI64_RS21020 PF09106 Elongation factor SelB, winged helix LI64_RS21020 PF00009 Elongation factor Tu GTP binding domain LI64_RS21020 PF09107 Elongation factor SelB, winged helix LI64_RS21025 PF12390 Selenocysteine synthase N terminal LI64_RS21025 PF03841 L-seryl-tRNA selenium transferase LI64_RS21030 PF00043 Glutathione S-transferase, C-terminal domain LI64_RS21030 PF13417 Glutathione S-transferase, N-terminal domain LI64_RS21035 PF00529 HlyD membrane-fusion protein of T1SS LI64_RS21035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LI64_RS21040 PF11742 Protein of unknown function (DUF3302) LI64_RS21045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI64_RS21045 PF02378 Phosphotransferase system, EIIC LI64_RS21045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI64_RS21050 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS21050 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS21055 PF05068 Mannitol repressor LI64_RS21060 PF10928 Protein of unknown function (DUF2810) LI64_RS21065 PF13086 AAA domain LI64_RS21065 PF13087 AAA domain LI64_RS21065 PF13195 Protein of unknown function (DUF4011) LI64_RS21065 PF13086 AAA domain LI64_RS21065 PF13195 Protein of unknown function (DUF4011) LI64_RS21065 PF13087 AAA domain LI64_RS21075 PF13954 PapC N-terminal domain LI64_RS21075 PF00577 Outer membrane usher protein LI64_RS21075 PF13953 PapC C-terminal domain LI64_RS21080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS21080 PF02753 Pili assembly chaperone PapD, C-terminal domain LI64_RS21090 PF02652 L-lactate permease LI64_RS21095 PF00392 Bacterial regulatory proteins, gntR family LI64_RS21095 PF07729 FCD domain LI64_RS21100 PF01070 FMN-dependent dehydrogenase LI64_RS21105 PF07690 Major Facilitator Superfamily LI64_RS21110 PF00588 SpoU rRNA Methylase family LI64_RS21115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LI64_RS21115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LI64_RS21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS21120 PF03466 LysR substrate binding domain LI64_RS21125 PF00585 C-terminal regulatory domain of Threonine dehydratase LI64_RS21125 PF00291 Pyridoxal-phosphate dependent enzyme LI64_RS21130 PF00920 Dehydratase family LI64_RS21135 PF01063 Amino-transferase class IV LI64_RS21145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI64_RS21145 PF00205 Thiamine pyrophosphate enzyme, central domain LI64_RS21145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI64_RS21150 PF01078 Magnesium chelatase, subunit ChlI LI64_RS21150 PF13335 Magnesium chelatase, subunit ChlI C-terminal LI64_RS21155 PF04219 Protein of unknown function, DUF LI64_RS21160 PF03466 LysR substrate binding domain LI64_RS21160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS21200 PF01177 Asp/Glu/Hydantoin racemase LI64_RS21205 PF00593 TonB dependent receptor LI64_RS21205 PF07715 TonB-dependent Receptor Plug Domain LI64_RS21210 PF05958 tRNA (Uracil-5-)-methyltransferase LI64_RS21215 PF07226 Protein of unknown function (DUF1422) LI64_RS21220 PF00440 Bacterial regulatory proteins, tetR family LI64_RS21225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI64_RS21225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI64_RS21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS21230 PF03466 LysR substrate binding domain LI64_RS21235 PF14698 Argininosuccinate lyase C-terminal LI64_RS21235 PF00206 Lyase LI64_RS21240 PF00696 Amino acid kinase family LI64_RS21245 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI64_RS21245 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI64_RS21250 PF01546 Peptidase family M20/M25/M40 LI64_RS21250 PF07687 Peptidase dimerisation domain LI64_RS21255 PF00311 Phosphoenolpyruvate carboxylase LI64_RS21260 PF00923 Transaldolase/Fructose-6-phosphate aldolase LI64_RS21265 PF00465 Iron-containing alcohol dehydrogenase LI64_RS21270 PF00141 Peroxidase LI64_RS21275 PF02219 Methylenetetrahydrofolate reductase LI64_RS21280 PF03447 Homoserine dehydrogenase, NAD binding domain LI64_RS21280 PF00742 Homoserine dehydrogenase LI64_RS21280 PF00696 Amino acid kinase family LI64_RS21285 PF01053 Cys/Met metabolism PLP-dependent enzyme LI64_RS21290 PF01340 Met Apo-repressor, MetJ LI64_RS21295 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI64_RS21300 PF01197 Ribosomal protein L31 LI64_RS21305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LI64_RS21305 PF00271 Helicase conserved C-terminal domain LI64_RS21305 PF17764 3′ DNA-binding domain (3′BD) LI64_RS21305 PF00270 DEAD/DEAH box helicase LI64_RS21305 PF18074 Primosomal protein N C-terminal domain LI64_RS21310 PF00356 Bacterial regulatory proteins, lacI family LI64_RS21315 PF05036 Sporulation related domain LI64_RS21320 PF00227 Proteasome subunit LI64_RS21325 PF10431 C-terminal, D2-small domain, of ClpB protein LI64_RS21325 PF07724 AAA domain (Cdc48 subfamily) LI64_RS21325 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS21330 PF01040 UbiA prenyltransferase family LI64_RS21335 PF03737 Aldolase/RraA LI64_RS21340 PF06005 Cell division protein ZapB LI64_RS21345 PF00230 Major intrinsic protein LI64_RS21350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS21350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS21355 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LI64_RS21360 PF00175 Oxidoreductase NAD-binding domain LI64_RS21360 PF00970 Oxidoreductase FAD-binding domain LI64_RS21365 PF05656 Protein of unknown function (DUF805) LI64_RS21370 PF07305 Protein of unknown function (DUF1454) LI64_RS21375 PF00121 Triosephosphate isomerase LI64_RS21385 PF02611 CDP-diacylglycerol pyrophosphatase LI64_RS21395 PF00365 Phosphofructokinase LI64_RS21400 PF01545 Cation efflux family LI64_RS21400 PF16916 Dimerisation domain of Zinc Transporter LI64_RS21415 PF00004 ATPase family associated with various cellular activities (AAA) LI64_RS21425 PF07813 LTXXQ motif family protein LI64_RS21430 PF00486 Transcriptional regulatory protein, C terminal LI64_RS21430 PF00072 Response regulator receiver domain LI64_RS21435 PF16527 Two-component sensor protein CpxA, periplasmic domain LI64_RS21435 PF00672 HAMP domain LI64_RS21435 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS21435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS21440 PF03473 MOSC domain LI64_RS21440 PF03475 3-alpha domain LI64_RS21445 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI64_RS21445 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI64_RS21450 PF06379 L-rhamnose-proton symport protein (RhaT) LI64_RS21455 PF12833 Helix-turn-helix domain LI64_RS21455 PF02311 AraC-like ligand binding domain LI64_RS21460 PF02311 AraC-like ligand binding domain LI64_RS21460 PF12833 Helix-turn-helix domain LI64_RS21470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI64_RS21470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI64_RS21475 PF06134 L-rhamnose isomerase (RhaA) LI64_RS21480 PF00596 Class II Aldolase and Adducin N-terminal domain LI64_RS21485 PF13407 Periplasmic binding protein domain LI64_RS21490 PF00005 ABC transporter LI64_RS21495 PF02653 Branched-chain amino acid transport system / permease component LI64_RS21500 PF02653 Branched-chain amino acid transport system / permease component LI64_RS21505 PF00465 Iron-containing alcohol dehydrogenase LI64_RS21510 PF05336 L-rhamnose mutarotase LI64_RS21520 PF03591 AzlC protein LI64_RS21535 PF13953 PapC C-terminal domain LI64_RS21535 PF00577 Outer membrane usher protein LI64_RS21535 PF13954 PapC N-terminal domain LI64_RS21540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI64_RS21555 PF02634 FdhD/NarQ family LI64_RS21560 PF00384 Molybdopterin oxidoreductase LI64_RS21560 PF01568 Molydopterin dinucleotide binding domain LI64_RS21560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS21565 PF00384 Molybdopterin oxidoreductase LI64_RS21565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI64_RS21565 PF01568 Molydopterin dinucleotide binding domain LI64_RS21570 PF13247 4Fe-4S dicluster domain LI64_RS21570 PF09163 Formate dehydrogenase N, transmembrane LI64_RS21575 PF01292 Prokaryotic cytochrome b561 LI64_RS21580 PF04216 Protein involved in formate dehydrogenase formation LI64_RS21590 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system LI64_RS21595 PF09500 Putative thioesterase (yiiD_Cterm) LI64_RS21595 PF00583 Acetyltransferase (GNAT) family LI64_RS21600 PF02580 D-Tyr-tRNA(Tyr) deacylase LI64_RS21605 PF03631 Virulence factor BrkB LI64_RS21610 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS21615 PF00455 DeoR C terminal sensor domain LI64_RS21615 PF08220 DeoR-like helix-turn-helix domain LI64_RS21620 PF00294 pfkB family carbohydrate kinase LI64_RS21625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI64_RS21625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI64_RS21630 PF01791 DeoC/LacD family aldolase LI64_RS21640 PF01055 Glycosyl hydrolases family 31 LI64_RS21655 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI64_RS21660 PF03144 Elongation factor Tu domain 2 LI64_RS21660 PF00679 Elongation factor G C-terminus LI64_RS21660 PF00009 Elongation factor Tu GTP binding domain LI64_RS21665 PF00120 Glutamine synthetase, catalytic domain LI64_RS21665 PF03951 Glutamine synthetase, beta-Grasp domain LI64_RS21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS21670 PF00989 PAS fold LI64_RS21670 PF00512 His Kinase A (phospho-acceptor) domain LI64_RS21675 PF00072 Response regulator receiver domain LI64_RS21675 PF00158 Sigma-54 interaction domain LI64_RS21675 PF02954 Bacterial regulatory protein, Fis family LI64_RS21685 PF04055 Radical SAM superfamily LI64_RS21685 PF06969 HemN C-terminal domain LI64_RS21690 PF04220 Der GTPase activator (YihI) LI64_RS21695 PF01926 50S ribosome-binding GTPase LI64_RS21700 PF00476 DNA polymerase family A LI64_RS21700 PF01367 5'-3' exonuclease, C-terminal SAM fold LI64_RS21700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI64_RS21700 PF01612 3'-5' exonuclease LI64_RS21705 PF01553 Acyltransferase LI64_RS21710 PF01323 DSBA-like thioredoxin domain LI64_RS21715 PF01636 Phosphotransferase enzyme family LI64_RS21720 PF06288 Protein of unknown function (DUF1040) LI64_RS21725 PF12804 MobA-like NTP transferase domain LI64_RS21730 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LI64_RS21755 PF00392 Bacterial regulatory proteins, gntR family LI64_RS21755 PF07729 FCD domain LI64_RS21760 PF07690 Major Facilitator Superfamily LI64_RS21765 PF00356 Bacterial regulatory proteins, lacI family LI64_RS21770 PF00294 pfkB family carbohydrate kinase LI64_RS21775 PF13407 Periplasmic binding protein domain LI64_RS21780 PF02653 Branched-chain amino acid transport system / permease component LI64_RS21785 PF00005 ABC transporter LI64_RS21790 PF05025 RbsD / FucU transport protein family LI64_RS21795 PF02705 K+ potassium transporter LI64_RS21800 PF07728 AAA domain (dynein-related subfamily) LI64_RS21800 PF12592 Protein of unknown function (DUF3763) LI64_RS21800 PF17868 AAA lid domain LI64_RS21805 PF05762 VWA domain containing CoxE-like protein LI64_RS21810 PF03590 Aspartate-ammonia ligase LI64_RS21815 PF01037 Lrp/AsnC ligand binding domain LI64_RS21820 PF00258 Flavodoxin LI64_RS21825 PF13932 GidA associated domain LI64_RS21825 PF01134 Glucose inhibited division protein A LI64_RS21830 PF02527 rRNA small subunit methyltransferase G LI64_RS21835 PF03899 ATP synthase I chain LI64_RS21840 PF00119 ATP synthase A chain LI64_RS21845 PF00137 ATP synthase subunit C LI64_RS21850 PF00430 ATP synthase B/B' CF(0) LI64_RS21855 PF00213 ATP synthase delta (OSCP) subunit LI64_RS21860 PF00306 ATP synthase alpha/beta chain, C terminal domain LI64_RS21860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI64_RS21860 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI64_RS21865 PF00231 ATP synthase LI64_RS21870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI64_RS21870 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI64_RS21875 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LI64_RS21875 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LI64_RS21880 PF12804 MobA-like NTP transferase domain LI64_RS21880 PF00132 Bacterial transferase hexapeptide (six repeats) LI64_RS21885 PF01380 SIS domain LI64_RS21890 PF12849 PBP superfamily domain LI64_RS21895 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS21900 PF00528 Binding-protein-dependent transport system inner membrane component LI64_RS21905 PF00005 ABC transporter LI64_RS21910 PF01895 PhoU domain LI64_RS21915 PF13419 Haloacid dehalogenase-like hydrolase LI64_RS21920 PF00860 Permease family LI64_RS21925 PF03358 NADPH-dependent FMN reductase LI64_RS21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS21935 PF03466 LysR substrate binding domain LI64_RS21940 PF07690 Major Facilitator Superfamily LI64_RS21945 PF10396 GTP-binding protein TrmE N-terminus LI64_RS21945 PF12631 MnmE helical domain LI64_RS21945 PF01926 50S ribosome-binding GTPase LI64_RS21950 PF02096 60Kd inner membrane protein LI64_RS21950 PF14849 YidC periplasmic domain LI64_RS21955 PF00825 Ribonuclease P LI64_RS21960 PF00468 Ribosomal protein L34 LI64_RS22010 PF02463 RecF/RecN/SMC N terminal domain LI64_RS22025 PF00986 DNA gyrase B subunit, carboxyl terminus LI64_RS22025 PF00204 DNA gyrase B LI64_RS22025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS22025 PF01751 Toprim domain LI64_RS22025 PF18053 DNA gyrase B subunit insert domain LI64_RS22055 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS22055 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS22150 PF00392 Bacterial regulatory proteins, gntR family LI64_RS22150 PF07702 UTRA domain LI64_RS22210 PF07690 Major Facilitator Superfamily LI64_RS22285 PF07690 Major Facilitator Superfamily LI64_RS22290 PF07690 Major Facilitator Superfamily LI64_RS22315 PF03466 LysR substrate binding domain LI64_RS22315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI64_RS22375 PF00204 DNA gyrase B LI64_RS22375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI64_RS22375 PF18053 DNA gyrase B subunit insert domain LI64_RS22375 PF01751 Toprim domain LI64_RS22375 PF00986 DNA gyrase B subunit, carboxyl terminus LI64_RS22395 PF08125 Mannitol dehydrogenase C-terminal domain LI64_RS22395 PF01232 Mannitol dehydrogenase Rossmann domain LI64_RS22445 PF02080 TrkA-C domain LI64_RS22445 PF06826 Predicted Permease Membrane Region LI64_RS22630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI64_RS22630 PF13378 Enolase C-terminal domain-like LI64_RS22725 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI64_RS22725 PF02056 Family 4 glycosyl hydrolase LI64_RS22890 PF13953 PapC C-terminal domain LI64_RS22890 PF00577 Outer membrane usher protein LI64_RS22890 PF13954 PapC N-terminal domain LI64_RS23115 PF00589 Phage integrase family LI64_RS23115 PF14659 Phage integrase, N-terminal SAM-like domain LI64_RS23115 PF13356 Arm DNA-binding domain LI64_RS23130 PF01055 Glycosyl hydrolases family 31 LI64_RS23130 PF13802 Galactose mutarotase-like LI64_RS23245 PF06082 Exopolysaccharide biosynthesis protein YbjH LI64_RS23265 PF13807 G-rich domain on putative tyrosine kinase LI64_RS23265 PF02706 Chain length determinant protein LI64_RS23265 PF13614 AAA domain LI64_RS23450 PF08240 Alcohol dehydrogenase GroES-like domain LI64_RS23450 PF00107 Zinc-binding dehydrogenase LI64_RS23635 PF01295 Adenylate cyclase, class-I LI64_RS23635 PF12633 Adenylate cyclase NT domain LI64_RS23695 PF00270 DEAD/DEAH box helicase LI64_RS23695 PF00271 Helicase conserved C-terminal domain LI64_RS23695 PF00570 HRDC domain LI64_RS23695 PF16124 RecQ zinc-binding LI64_RS23695 PF09382 RQC domain LI64_RS23700 PF00570 HRDC domain LI64_RS23700 PF00271 Helicase conserved C-terminal domain LI64_RS23700 PF00270 DEAD/DEAH box helicase LI64_RS23700 PF16124 RecQ zinc-binding LI64_RS23700 PF09382 RQC domain LI64_RS23755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI64_RS23755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI64_RS23755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI64_RS23755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI64_RS24065 PF04560 RNA polymerase Rpb2, domain 7 LI64_RS24065 PF00562 RNA polymerase Rpb2, domain 6 LI64_RS24065 PF10385 RNA polymerase beta subunit external 1 domain LI64_RS24065 PF04565 RNA polymerase Rpb2, domain 3 LI64_RS24065 PF04561 RNA polymerase Rpb2, domain 2 LI64_RS24065 PF04563 RNA polymerase beta subunit LI64_RS24080 PF04560 RNA polymerase Rpb2, domain 7 LI64_RS24080 PF00562 RNA polymerase Rpb2, domain 6 LI64_RS24080 PF04565 RNA polymerase Rpb2, domain 3 LI64_RS24080 PF10385 RNA polymerase beta subunit external 1 domain LI64_RS24080 PF04563 RNA polymerase beta subunit LI64_RS24080 PF04561 RNA polymerase Rpb2, domain 2 LI64_RS24110 PF00623 RNA polymerase Rpb1, domain 2 LI64_RS24110 PF04983 RNA polymerase Rpb1, domain 3 LI64_RS24110 PF05000 RNA polymerase Rpb1, domain 4 LI64_RS24110 PF04998 RNA polymerase Rpb1, domain 5 LI64_RS24110 PF04997 RNA polymerase Rpb1, domain 1 LI64_RS24155 PF01964 Radical SAM ThiC family LI64_RS24155 PF13667 ThiC-associated domain LI64_RS24260 PF00463 Isocitrate lyase family LI64_RS24395 PF13018 Extended Signal Peptide of Type V secretion system LI64_RS24395 PF03895 YadA-like membrane anchor domain LI64_RS24395 PF05658 Head domain of trimeric autotransporter adhesin LI64_RS24395 PF05662 Coiled stalk of trimeric autotransporter adhesin LI64_RS24415 PF05840 Bacteriophage replication gene A protein (GPA)