locus-tag	class	description
LI62_RS00280	COG0592	DNA-directed DNA polymerase activity
LI62_RS00285	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LI62_RS00295	COG0583	DNA-binding transcription factor activity
LI62_RS00300	COG3321	synthase
LI62_RS00300	COG0604	alcohol dehydrogenase
LI62_RS00300	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS00305	COG0561	phosphatase activity
LI62_RS00310	COG2186	Transcriptional regulator
LI62_RS00315	COG3734	2-keto-3-deoxy-galactonokinase
LI62_RS00320	COG0800	Aldolase
LI62_RS00325	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS00330	COG2271	Major facilitator Superfamily
LI62_RS00335	COG0823	Involved in the tonB-independent uptake of proteins
LI62_RS00340	COG5645	(Lipo)protein
LI62_RS00350	COG0071	Belongs to the small heat shock protein (HSP20) family
LI62_RS00355	COG2985	domain, Protein
LI62_RS00360	COG2188	Transcriptional regulator
LI62_RS00375	COG2149	membrane
LI62_RS00390	COG2610	gluconate transmembrane transporter activity
LI62_RS00395	COG0583	DNA-binding transcription factor activity
LI62_RS00400	COG2814	Major facilitator Superfamily
LI62_RS00420	COG4680	protein conserved in bacteria
LI62_RS00425	COG5499	transcription regulator containing HTH domain
LI62_RS00430	COG0028	Belongs to the TPP enzyme family
LI62_RS00435	COG0440	acetolactate synthase activity
LI62_RS00440	COG2197	response regulator
LI62_RS00460	COG0596	Alpha beta hydrolase
LI62_RS00465	COG0583	DNA-binding transcription factor activity
LI62_RS00480	COG2801	Transposase and inactivated derivatives
LI62_RS00480	COG3415	Transposase
LI62_RS00490	COG0697	spore germination
LI62_RS00495	COG4580	involved in the transport of maltose and maltodextrins
LI62_RS00500	COG1447	Phosphotransferase system cellobiose-specific component IIA
LI62_RS00505	COG2723	6-phospho-beta-galactosidase activity
LI62_RS00510	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS00510	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS00520	COG1609	Transcriptional regulator
LI62_RS00530	COG2814	Major facilitator Superfamily
LI62_RS00540	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS00545	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS00555	COG0454	-acetyltransferase
LI62_RS00560	COG1309	transcriptional regulator
LI62_RS00570	COG1464	Belongs to the NlpA lipoprotein family
LI62_RS00595	COG3188	usher protein
LI62_RS00600	COG3121	Chaperone
LI62_RS00630	COG3188	usher protein
LI62_RS00655	COG2274	protein secretion by the type I secretion system
LI62_RS00670	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LI62_RS00685	COG3272	Protein of unknown function (DUF1722)
LI62_RS00690	COG2351	hydroxyisourate hydrolase activity
LI62_RS00720	COG3121	Chaperone
LI62_RS00750	COG0519	Catalyzes the synthesis of GMP from XMP
LI62_RS00795	COG2003	Belongs to the UPF0758 family
LI62_RS00830	COG0659	secondary active sulfate transmembrane transporter activity
LI62_RS00835	COG0589	response to stress
LI62_RS00850	COG0431	NADPH-dependent FMN reductase
LI62_RS00880	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LI62_RS00905	COG0210	DNA helicase
LI62_RS00910	COG0582	viral genome integration into host DNA
LI62_RS00920	COG2211	Major facilitator Superfamily
LI62_RS00925	COG1501	Belongs to the glycosyl hydrolase 31 family
LI62_RS00930	COG2982	Protein involved in outer membrane biogenesis
LI62_RS00935	COG2233	PERMEase
LI62_RS00940	COG0786	glutamate:sodium symporter activity
LI62_RS00945	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LI62_RS00950	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LI62_RS00955	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LI62_RS00970	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LI62_RS00990	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS00995	COG1596	polysaccharide export
LI62_RS01000	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LI62_RS01005	COG3206	protein involved in exopolysaccharide biosynthesis
LI62_RS01005	COG0489	protein tyrosine kinase activity
LI62_RS01010	COG2860	membrane
LI62_RS01015	COG1561	YicC-like family, N-terminal region
LI62_RS01025	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LI62_RS01035	COG0756	dUTP diphosphatase activity
LI62_RS01040	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LI62_RS01045	COG2003	Belongs to the UPF0758 family
LI62_RS01050	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LI62_RS01055	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LI62_RS01060	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LI62_RS01065	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LI62_RS01075	COG1519	Transferase
LI62_RS01080	COG1216	Glycosyl transferase, family 2
LI62_RS01085	COG0438	transferase activity, transferring glycosyl groups
LI62_RS01095	COG0859	PFAM glycosyl transferase family 9
LI62_RS01120	COG0859	PFAM glycosyl transferase family 9
LI62_RS01125	COG0859	PFAM glycosyl transferase family 9
LI62_RS01140	COG1063	alcohol dehydrogenase
LI62_RS01150	COG0438	transferase activity, transferring glycosyl groups
LI62_RS01155	COG0463	Glycosyl transferase, family 2
LI62_RS01160	COG2861	carbohydrate metabolic process
LI62_RS01165	COG4942	peptidase
LI62_RS01170	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LI62_RS01175	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LI62_RS01180	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LI62_RS01185	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LI62_RS01190	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LI62_RS01200	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LI62_RS01210	COG0248	Ppx GppA phosphatase
LI62_RS01220	COG3118	belongs to the thioredoxin family
LI62_RS01225	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LI62_RS01230	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LI62_RS01240	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LI62_RS01245	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LI62_RS01250	COG0456	acetyltransferase
LI62_RS01255	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LI62_RS01260	COG2244	polysaccharide biosynthetic process
LI62_RS01275	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
LI62_RS01305	COG3071	HemY protein
LI62_RS01310	COG2959	enzyme of heme biosynthesis
LI62_RS01320	COG0181	hydroxymethylbilane synthase activity
LI62_RS01335	COG5567	small periplasmic lipoprotein
LI62_RS01355	COG1011	Hydrolase
LI62_RS01360	COG0210	DNA helicase
LI62_RS01380	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
LI62_RS01390	COG1280	lysine exporter protein (LysE YggA)
LI62_RS01395	COG1280	lysine exporter protein (LysE YggA)
LI62_RS01400	COG2267	carboxylic ester hydrolase activity
LI62_RS01405	COG0561	phosphatase activity
LI62_RS01410	COG0697	spore germination
LI62_RS01415	COG0583	DNA-binding transcription factor activity
LI62_RS01425	COG0412	Dienelactone hydrolase
LI62_RS01435	COG1322	Protein conserved in bacteria
LI62_RS01440	COG2226	methyltransferase
LI62_RS01445	COG3165	ubiquinone biosynthetic process from chorismate
LI62_RS01450	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LI62_RS01465	COG0805	protein transport
LI62_RS01470	COG0084	hydrolase, TatD family'
LI62_RS01480	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LI62_RS01490	COG0488	(ABC) transporter
LI62_RS01495	COG2944	sequence-specific DNA binding
LI62_RS01510	COG1278	Cold shock
LI62_RS01515	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LI62_RS01525	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS01535	COG1609	Transcriptional regulator
LI62_RS01540	COG2885	chlorophyll binding
LI62_RS01545	COG0243	molybdopterin cofactor binding
LI62_RS01550	COG0456	acetyltransferase
LI62_RS01555	COG2818	Glycosylase
LI62_RS01560	COG5571	outer membrane autotransporter
LI62_RS01565	COG2223	nitrite transmembrane transporter activity
LI62_RS01580	COG0747	negative chemotaxis
LI62_RS01585	COG0601	transmembrane transport
LI62_RS01590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LI62_RS01595	COG0444	Belongs to the ABC transporter superfamily
LI62_RS01600	COG4608	Belongs to the ABC transporter superfamily
LI62_RS01605	COG1072	(Pantothenic acid kinase))
LI62_RS01640	COG0250	Participates in transcription elongation, termination and antitermination
LI62_RS01685	COG3706	GGDEF domain
LI62_RS01695	COG2022	thiamine diphosphate biosynthetic process
LI62_RS01700	COG2104	thiamine diphosphate biosynthetic process
LI62_RS01705	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LI62_RS01720	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
LI62_RS01730	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LI62_RS01735	COG1515	deoxyribonuclease V activity
LI62_RS01740	COG3068	Protein conserved in bacteria
LI62_RS01755	COG0151	Belongs to the GarS family
LI62_RS01790	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LI62_RS01800	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LI62_RS01830	COG1187	pseudouridine synthase activity
LI62_RS01845	COG0527	aspartate kinase activity
LI62_RS01870	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS01875	COG3223	Belongs to the PsiE family
LI62_RS01900	COG4580	involved in the transport of maltose and maltodextrins
LI62_RS01910	COG3161	chorismate lyase activity
LI62_RS01920	COG2937	Belongs to the GPAT DAPAT family
LI62_RS01925	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LI62_RS01930	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LI62_RS01935	COG0534	Mate efflux family protein
LI62_RS01940	COG3237	CsbD-like
LI62_RS01945	COG0735	belongs to the Fur family
LI62_RS01960	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LI62_RS01970	COG0604	alcohol dehydrogenase
LI62_RS01975	COG0305	Participates in initiation and elongation during chromosome replication
LI62_RS01985	COG1448	Aminotransferase
LI62_RS01990	COG3700	Belongs to the class B bacterial acid phosphatase family
LI62_RS02000	COG2315	Protein conserved in bacteria
LI62_RS02010	COG0629	single-stranded DNA binding
LI62_RS02025	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LI62_RS02035	COG0789	Transcriptional regulator
LI62_RS02040	COG0625	glutathione transferase activity
LI62_RS02045	COG2252	PERMEase
LI62_RS02050	COG0025	NhaP-type Na H and K H
LI62_RS02055	COG0583	DNA-binding transcription factor activity
LI62_RS02065	COG1346	cytolysis
LI62_RS02070	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LI62_RS02075	COG3162	membrane
LI62_RS02085	COG1301	dicarboxylic acid transport
LI62_RS02090	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
LI62_RS02100	COG2801	Transposase and inactivated derivatives
LI62_RS02105	COG2963	transposase activity
LI62_RS02110	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS02115	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS02130	COG0191	fructose-bisphosphate aldolase activity
LI62_RS02145	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS02150	COG1129	ABC transporter
LI62_RS02155	COG4191	Histidine kinase
LI62_RS02155	COG0784	Response regulator, receiver
LI62_RS02160	COG1940	carbohydrate kinase activity
LI62_RS02165	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LI62_RS02170	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS02175	COG1129	ABC transporter
LI62_RS02180	COG1879	ABC-type sugar transport system periplasmic component
LI62_RS02185	COG1737	Transcriptional regulator
LI62_RS02190	COG0698	ribose 5-phosphate isomerase
LI62_RS02200	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LI62_RS02205	COG0456	acetyltransferase
LI62_RS02210	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
LI62_RS02215	COG3454	Phosphonate metabolism
LI62_RS02220	COG4778	phosphonate C-P lyase system protein PhnL
LI62_RS02225	COG4107	phosphonate C-P lyase system protein PhnK
LI62_RS02230	COG3627	carbon phosphorus lyase activity
LI62_RS02235	COG3626	phosphonate metabolism
LI62_RS02240	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LI62_RS02245	COG3624	Phosphonate C-P lyase system protein PhnG
LI62_RS02250	COG2188	Transcriptional regulator
LI62_RS02255	COG3639	organic phosphonate transmembrane transporter activity
LI62_RS02260	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LI62_RS02270	COG2764	glyoxalase bleomycin resistance protein dioxygenase
LI62_RS02275	COG2824	Alkylphosphonate utilization operon protein PhnA
LI62_RS02280	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LI62_RS02300	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LI62_RS02325	COG3647	Membrane
LI62_RS02345	COG1309	transcriptional regulator
LI62_RS02360	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LI62_RS02365	COG1027	Aspartate ammonia-lyase
LI62_RS02370	COG3030	protein affecting phage T7 exclusion by the F plasmid
LI62_RS02375	COG0531	amino acid
LI62_RS02385	COG0459	protein refolding
LI62_RS02390	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LI62_RS02395	COG0700	Nucleoside recognition
LI62_RS02400	COG3366	ferrous iron transmembrane transporter activity
LI62_RS02425	COG5510	response to toxic substance
LI62_RS02450	COG0583	DNA-binding transcription factor activity
LI62_RS02460	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LI62_RS02465	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LI62_RS02470	COG1053	succinate dehydrogenase
LI62_RS02475	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LI62_RS02485	COG1511	domain protein
LI62_RS02485	COG3264	Mechanosensitive ion channel
LI62_RS02520	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LI62_RS02525	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LI62_RS02525	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LI62_RS02530	COG0802	atpase or kinase
LI62_RS02540	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LI62_RS02545	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LI62_RS02550	COG1923	regulation of RNA biosynthetic process
LI62_RS02555	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LI62_RS02560	COG0330	HflC and HflK could
LI62_RS02565	COG0330	HflC and HflK could
LI62_RS02570	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LI62_RS02580	COG1959	2 iron, 2 sulfur cluster binding
LI62_RS02585	COG0557	exoribonuclease II activity
LI62_RS02590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LI62_RS02595	COG0477	Major facilitator Superfamily
LI62_RS02600	COG1960	acyl-CoA dehydrogenase activity
LI62_RS02605	COG0840	transmembrane signaling receptor activity
LI62_RS02615	COG3650	response to hydrogen peroxide
LI62_RS02620	COG1073	alpha beta
LI62_RS02635	COG3037	sugar-specific permease SgaT UlaA
LI62_RS02675	COG2965	DNA replication, synthesis of RNA primer
LI62_RS02680	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LI62_RS02685	COG0359	binds to the 23S rRNA
LI62_RS02690	COG0697	spore germination
LI62_RS02695	COG3061	Opacity-associated protein A
LI62_RS02700	COG0545	Peptidyl-prolyl cis-trans isomerase
LI62_RS02705	COG1113	amino acid transport
LI62_RS02715	COG0840	transmembrane signaling receptor activity
LI62_RS02720	COG0697	spore germination
LI62_RS02730	COG0702	epimerase
LI62_RS02735	COG1733	regulation of RNA biosynthetic process
LI62_RS02745	COG1218	3'(2'),5'-bisphosphate nucleotidase
LI62_RS02750	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LI62_RS02770	COG1253	flavin adenine dinucleotide binding
LI62_RS02775	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LI62_RS02780	COG0729	surface antigen
LI62_RS02785	COG2911	Protein conserved in bacteria
LI62_RS02790	COG2105	PFAM AIG2 family protein
LI62_RS02800	COG1879	ABC-type sugar transport system periplasmic component
LI62_RS02805	COG1129	ABC transporter
LI62_RS02810	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS02815	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS02830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LI62_RS02835	COG3028	Belongs to the UPF0307 family
LI62_RS02840	COG0312	modulator of DNA gyrase
LI62_RS02880	COG3964	amidohydrolase
LI62_RS02900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS02900	COG3711	transcriptional antiterminator
LI62_RS02905	COG0602	queuosine metabolic process
LI62_RS02915	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS02915	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS02915	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS02920	COG0383	alpha-mannosidase activity
LI62_RS02940	COG0366	Alpha amylase catalytic
LI62_RS02945	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS02945	COG1263	PTS System
LI62_RS02950	COG1609	Transcriptional regulator
LI62_RS02960	COG3525	Glycosyl hydrolase, family 20, catalytic domain
LI62_RS02965	COG3397	chitin binding
LI62_RS02970	COG0251	oxidation-reduction process
LI62_RS02980	COG0540	Belongs to the ATCase OTCase family
LI62_RS02985	COG1438	arginine binding
LI62_RS02990	COG1288	antiporter activity
LI62_RS03005	COG2235	arginine
LI62_RS03010	COG2731	YhcH YjgK YiaL family protein
LI62_RS03015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LI62_RS03020	COG0129	dihydroxy-acid dehydratase activity
LI62_RS03025	COG2211	Major facilitator Superfamily
LI62_RS03030	COG3507	Belongs to the glycosyl hydrolase 43 family
LI62_RS03035	COG1414	Transcriptional regulator
LI62_RS03050	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LI62_RS03165	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LI62_RS03170	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LI62_RS03185	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
LI62_RS03260	COG1609	Transcriptional regulator
LI62_RS03270	COG2211	Major facilitator Superfamily
LI62_RS03295	COG1335	isochorismatase
LI62_RS03310	COG2204	response regulator
LI62_RS03315	COG4191	Histidine kinase
LI62_RS03320	COG4566	intracellular signal transduction
LI62_RS03325	COG0346	lactoylglutathione lyase activity
LI62_RS03330	COG0740	serine-type endopeptidase activity
LI62_RS03335	COG2850	peptidyl-arginine hydroxylation
LI62_RS03360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LI62_RS03365	COG5457	Domain of unknown function (DUF1127)
LI62_RS03375	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LI62_RS03385	COG0640	Transcriptional regulator
LI62_RS03395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS03405	COG2733	membrane
LI62_RS03430	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS03445	COG0523	cobalamin synthesis protein
LI62_RS03450	COG2879	small protein
LI62_RS03455	COG1966	Carbon starvation protein
LI62_RS03460	COG1349	DNA-binding transcription factor activity
LI62_RS03465	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LI62_RS03470	COG2368	4-hydroxyphenylacetate
LI62_RS03490	COG3971	2-oxopent-4-enoate hydratase activity
LI62_RS03500	COG3384	dioxygenase
LI62_RS03505	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS03510	COG0179	Fumarylacetoacetate (FAA) hydrolase
LI62_RS03515	COG1846	Transcriptional regulator
LI62_RS03520	COG0840	transmembrane signaling receptor activity
LI62_RS03540	COG1484	DNA-dependent DNA replication
LI62_RS03550	COG1764	response to oxidative stress
LI62_RS03555	COG1846	Transcriptional regulator
LI62_RS03560	COG3610	response to peptide
LI62_RS03565	COG2966	Psort location CytoplasmicMembrane, score
LI62_RS03570	COG2197	response regulator
LI62_RS03575	COG2197	response regulator
LI62_RS03580	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LI62_RS03585	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS03585	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS03590	COG4114	ferric iron reductase
LI62_RS03620	COG2813	Specifically methylates the guanine in position
LI62_RS03625	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
LI62_RS03630	COG0456	acetyltransferase
LI62_RS03635	COG1011	Hydrolase
LI62_RS03640	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LI62_RS03645	COG2823	Periplasmic or secreted lipoprotein
LI62_RS03650	COG5487	UPF0391 membrane protein
LI62_RS03655	COG4667	esterase of the alpha-beta hydrolase superfamily
LI62_RS03660	COG0084	hydrolase, TatD family'
LI62_RS03665	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LI62_RS03670	COG1328	CTP reductase activity
LI62_RS03680	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LI62_RS03700	COG3726	membrane protein affecting hemolysin expression
LI62_RS03705	COG0560	Phosphoserine phosphatase
LI62_RS03730	COG0488	(ABC) transporter
LI62_RS03735	COG0741	lytic transglycosylase activity
LI62_RS03740	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LI62_RS03745	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LI62_RS03750	COG0406	alpha-ribazole phosphatase activity
LI62_RS03755	COG2207	Transcriptional regulator
LI62_RS03755	COG3708	Transcriptional regulator
LI62_RS03760	COG3045	CreA protein
LI62_RS03765	COG0745	RESPONSE REGULATOR receiver
LI62_RS03770	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
LI62_RS03775	COG0527	aspartate kinase activity
LI62_RS03775	COG0460	homoserine dehydrogenase
LI62_RS03785	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LI62_RS03800	COG1115	amino acid carrier protein
LI62_RS03810	COG0521	Mo-molybdopterin cofactor biosynthetic process
LI62_RS03815	COG0477	Major facilitator Superfamily
LI62_RS03820	COG1584	GPR1 FUN34 yaaH family protein
LI62_RS03830	COG0443	Heat shock 70 kDa protein
LI62_RS03840	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LI62_RS03845	COG0583	DNA-binding transcription factor activity
LI62_RS03850	COG0268	Binds directly to 16S ribosomal RNA
LI62_RS03855	COG0196	riboflavin kinase activity
LI62_RS03870	COG1047	Peptidyl-prolyl cis-trans
LI62_RS03890	COG3716	PTS system mannose fructose sorbose family IID component
LI62_RS03895	COG3715	PTS system
LI62_RS03900	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS03915	COG1609	Transcriptional regulator
LI62_RS03925	COG0505	Belongs to the CarA family
LI62_RS03950	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LI62_RS03950	COG0475	glutathione-regulated potassium exporter activity
LI62_RS03960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LI62_RS03965	COG2967	ApaG domain
LI62_RS03975	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LI62_RS03980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LI62_RS03985	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LI62_RS03990	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LI62_RS03995	COG0564	pseudouridine synthase activity
LI62_RS04000	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LI62_RS04005	COG0417	DNA replication proofreading
LI62_RS04010	COG0235	Class ii aldolase
LI62_RS04015	COG2160	L-arabinose isomerase activity
LI62_RS04020	COG1069	ribulokinase activity
LI62_RS04030	COG0586	Pfam SNARE associated Golgi protein
LI62_RS04040	COG1178	ABC-type Fe3 transport system permease component
LI62_RS04060	COG2814	Major facilitator Superfamily
LI62_RS04085	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LI62_RS04095	COG0028	Belongs to the TPP enzyme family
LI62_RS04105	COG1609	Transcriptional regulator
LI62_RS04110	COG2001	Belongs to the MraZ family
LI62_RS04125	COG0768	penicillin binding
LI62_RS04130	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LI62_RS04135	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LI62_RS04140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LI62_RS04150	COG0772	Belongs to the SEDS family
LI62_RS04165	COG1181	Belongs to the D-alanine--D-alanine ligase family
LI62_RS04175	COG0849	cell division
LI62_RS04180	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LI62_RS04185	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LI62_RS04195	COG0653	protein targeting
LI62_RS04200	COG0494	nUDIX hydrolase
LI62_RS04205	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LI62_RS04210	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LI62_RS04220	COG0516	GMP reductase activity
LI62_RS04225	COG1459	type II secretion system
LI62_RS04230	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LI62_RS04235	COG4969	Belongs to the N-Me-Phe pilin family
LI62_RS04245	COG3023	N-Acetylmuramoyl-L-alanine amidase
LI62_RS04250	COG3725	Membrane protein required for beta-lactamase induction
LI62_RS04255	COG3940	Belongs to the glycosyl hydrolase 43 family
LI62_RS04260	COG2211	Major facilitator Superfamily
LI62_RS04265	COG1113	amino acid transport
LI62_RS04275	COG2186	Transcriptional regulator
LI62_RS04280	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LI62_RS04285	COG0508	dehydrogenase complex catalyzes the overall conversion of
LI62_RS04290	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LI62_RS04300	COG3064	Membrane
LI62_RS04320	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LI62_RS04330	COG2132	Multicopper oxidase
LI62_RS04335	COG4993	Dehydrogenase
LI62_RS04345	COG0288	reversible hydration of carbon dioxide
LI62_RS04350	COG1131	(ABC) transporter
LI62_RS04355	COG0842	Transport permease protein
LI62_RS04360	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS04365	COG0726	polysaccharide deacetylase
LI62_RS04385	COG3539	Fimbrial protein
LI62_RS04390	COG3188	usher protein
LI62_RS04395	COG3121	Chaperone
LI62_RS04405	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LI62_RS04410	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LI62_RS04420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LI62_RS04425	COG0617	tRNA 3'-terminal CCA addition
LI62_RS04430	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LI62_RS04440	COG1489	DNA binding
LI62_RS04445	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LI62_RS04450	COG1643	Atp-dependent helicase
LI62_RS04455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LI62_RS04465	COG3121	Chaperone
LI62_RS04470	COG3188	usher protein
LI62_RS04480	COG4774	siderophore transport
LI62_RS04485	COG1120	ATPase activity
LI62_RS04490	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LI62_RS04495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS04500	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LI62_RS04510	COG0316	Belongs to the HesB IscA family
LI62_RS04515	COG2860	membrane
LI62_RS04525	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LI62_RS04530	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LI62_RS04535	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LI62_RS04540	COG3835	regulator
LI62_RS04585	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LI62_RS04595	COG0575	Belongs to the CDS family
LI62_RS04600	COG0750	zinc metalloprotease
LI62_RS04605	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS04615	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LI62_RS04620	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LI62_RS04625	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LI62_RS04630	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LI62_RS04635	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LI62_RS04645	COG0825	malonyl-CoA metabolic process
LI62_RS04650	COG1982	Orn Lys Arg decarboxylase major
LI62_RS04655	COG0346	lactoylglutathione lyase activity
LI62_RS04660	COG0037	tRNA processing
LI62_RS04665	COG4568	rho-dependent transcription termination
LI62_RS04680	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LI62_RS04685	COG3015	lipoprotein NlpE involved in copper resistance
LI62_RS04695	COG1720	tRNA m6t6A37 methyltransferase activity
LI62_RS04705	COG1464	Belongs to the NlpA lipoprotein family
LI62_RS04710	COG2011	ABC-type metal ion transport system permease component
LI62_RS04720	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LI62_RS04760	COG0583	DNA-binding transcription factor activity
LI62_RS04765	COG2814	Major facilitator Superfamily
LI62_RS04770	COG3021	interspecies interaction between organisms
LI62_RS04775	COG2226	methyltransferase
LI62_RS04780	COG0741	lytic transglycosylase activity
LI62_RS04780	COG1388	LysM domain
LI62_RS04785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LI62_RS04790	COG2226	methyltransferase
LI62_RS04815	COG0444	Belongs to the ABC transporter superfamily
LI62_RS04820	COG4608	Belongs to the ABC transporter superfamily
LI62_RS04825	COG0747	negative chemotaxis
LI62_RS04835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LI62_RS04845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LI62_RS04860	COG0121	glutamine amidotransferase
LI62_RS04865	COG3034	peptidoglycan biosynthetic process
LI62_RS04880	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LI62_RS04885	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LI62_RS04900	COG2991	Protein conserved in bacteria
LI62_RS04905	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LI62_RS04910	COG2195	Cleaves the N-terminal amino acid of tripeptides
LI62_RS04920	COG1073	alpha beta
LI62_RS04930	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LI62_RS04935	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LI62_RS04940	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LI62_RS04950	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LI62_RS04960	COG3300	MHYT domain
LI62_RS04960	COG5001	Diguanylate cyclase
LI62_RS04975	COG0628	permease
LI62_RS04980	COG0833	amino acid
LI62_RS04985	COG2040	homocysteine
LI62_RS04990	COG4521	taurine ABC transporter
LI62_RS04995	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LI62_RS05000	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LI62_RS05005	COG2175	clavaminate synthase activity
LI62_RS05015	COG0113	porphobilinogen synthase activity
LI62_RS05035	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LI62_RS05040	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
LI62_RS05060	COG1181	Belongs to the D-alanine--D-alanine ligase family
LI62_RS05085	COG3706	GGDEF domain
LI62_RS05090	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LI62_RS05095	COG1671	Belongs to the UPF0178 family
LI62_RS05100	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LI62_RS05110	COG4126	flavin adenine dinucleotide binding
LI62_RS05115	COG3123	guanosine phosphorylase activity
LI62_RS05125	COG1940	carbohydrate kinase activity
LI62_RS05130	COG0419	ATPase involved in DNA repair
LI62_RS05135	COG0420	3'-5' exonuclease activity
LI62_RS05145	COG5002	protein histidine kinase activity
LI62_RS05160	COG0366	Alpha amylase catalytic
LI62_RS05175	COG0450	alkyl hydroperoxide reductase
LI62_RS05180	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
LI62_RS05195	COG1862	Preprotein translocase
LI62_RS05200	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LI62_RS05205	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LI62_RS05220	COG3248	Nucleoside-binding outer membrane protein
LI62_RS05225	COG4238	major outer membrane lipoprotein
LI62_RS05230	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LI62_RS05235	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LI62_RS05235	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LI62_RS05240	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LI62_RS05245	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LI62_RS05250	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LI62_RS05255	COG0667	Aldo Keto reductase
LI62_RS05260	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LI62_RS05265	COG0142	geranyltranstransferase activity
LI62_RS05280	COG2188	Transcriptional regulator
LI62_RS05290	COG1486	melibiose metabolic process
LI62_RS05295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS05300	COG0693	protein deglycase activity
LI62_RS05305	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LI62_RS05315	COG2814	Major facilitator Superfamily
LI62_RS05320	COG0235	Class ii aldolase
LI62_RS05340	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS05345	COG1129	ABC transporter
LI62_RS05365	COG0109	protoheme IX farnesyltransferase activity
LI62_RS05370	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LI62_RS05375	COG1845	cytochrome c oxidase, subunit III
LI62_RS05380	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LI62_RS05385	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LI62_RS05395	COG2223	nitrite transmembrane transporter activity
LI62_RS05400	COG3056	Lipoprotein
LI62_RS05405	COG0271	Belongs to the BolA IbaG family
LI62_RS05410	COG0544	peptidyl-prolyl cis-trans isomerase activity
LI62_RS05425	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LI62_RS05430	COG0776	regulation of translation
LI62_RS05435	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LI62_RS05440	COG1555	photosystem II stabilization
LI62_RS05445	COG0824	Thioesterase
LI62_RS05450	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LI62_RS05455	COG4533	DNA binding
LI62_RS05460	COG0561	phosphatase activity
LI62_RS05470	COG1522	sequence-specific DNA binding
LI62_RS05475	COG1132	(ABC) transporter
LI62_RS05480	COG1132	(ABC) transporter
LI62_RS05485	COG0347	Belongs to the P(II) protein family
LI62_RS05490	COG0004	ammonium transporteR
LI62_RS05495	COG1946	Acyl-CoA thioesterase
LI62_RS05500	COG3126	Type III secretion system lipoprotein chaperone (YscW)
LI62_RS05505	COG3695	enzyme binding
LI62_RS05520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LI62_RS05525	COG2364	Membrane
LI62_RS05530	COG1609	Transcriptional regulator
LI62_RS05550	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LI62_RS05560	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LI62_RS05580	COG0110	maltose O-acetyltransferase activity
LI62_RS05595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS05600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS05605	COG1309	transcriptional regulator
LI62_RS05610	COG1196	nuclear chromosome segregation
LI62_RS05610	COG3264	Mechanosensitive ion channel
LI62_RS05620	COG3923	Primosomal replication protein n
LI62_RS05625	COG2832	Protein of unknown function (DUF454)
LI62_RS05630	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LI62_RS05640	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LI62_RS05645	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LI62_RS05650	COG0326	Molecular chaperone. Has ATPase activity
LI62_RS05660	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LI62_RS05665	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS05670	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LI62_RS05670	COG4651	solute:proton antiporter activity
LI62_RS05675	COG2223	nitrite transmembrane transporter activity
LI62_RS05680	COG0737	Belongs to the 5'-nucleotidase family
LI62_RS05685	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LI62_RS05690	COG3735	TraB family
LI62_RS05695	COG2217	Heavy metal translocating P-type atpase
LI62_RS05705	COG1585	Membrane protein implicated in regulation of membrane protease activity
LI62_RS05710	COG0330	HflC and HflK could
LI62_RS05720	COG4619	ABC transporter
LI62_RS05725	COG0390	transport system, permease component
LI62_RS05730	COG3118	belongs to the thioredoxin family
LI62_RS05735	COG0300	oxidoreductase activity
LI62_RS05740	COG2755	lipolytic protein G-D-S-L family
LI62_RS05745	COG4181	ATPase activity
LI62_RS05750	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LI62_RS05765	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LI62_RS05770	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LI62_RS05775	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LI62_RS05780	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LI62_RS05790	COG1988	membrane-bound metal-dependent
LI62_RS05795	COG1609	Transcriptional regulator
LI62_RS05800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS05800	COG1263	PTS System
LI62_RS05800	COG2190	(PTS) system
LI62_RS05805	COG2501	S4 domain
LI62_RS05865	COG0582	viral genome integration into host DNA
LI62_RS06035	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
LI62_RS06070	COG3646	Phage regulatory protein
LI62_RS06085	COG3728	DNA packaging
LI62_RS06090	COG1783	phage Terminase large subunit
LI62_RS06210	COG0463	Glycosyl transferase, family 2
LI62_RS06215	COG2246	polysaccharide biosynthetic process
LI62_RS06230	COG2135	peptidase activity
LI62_RS06250	COG1113	amino acid transport
LI62_RS06255	COG2211	Major facilitator Superfamily
LI62_RS06270	COG1609	Transcriptional regulator
LI62_RS06275	COG0668	transmembrane transport
LI62_RS06280	COG0477	Major facilitator Superfamily
LI62_RS06300	COG0778	Nitroreductase
LI62_RS06305	COG2315	Protein conserved in bacteria
LI62_RS06325	COG4774	siderophore transport
LI62_RS06355	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
LI62_RS06380	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
LI62_RS06390	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LI62_RS06420	COG4608	Belongs to the ABC transporter superfamily
LI62_RS06425	COG0444	Belongs to the ABC transporter superfamily
LI62_RS06430	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LI62_RS06435	COG0601	transmembrane transport
LI62_RS06465	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LI62_RS06470	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
LI62_RS06485	COG1121	(ABC) transporter
LI62_RS06490	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LI62_RS06495	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LI62_RS06500	COG2977	Belongs to the P-Pant transferase superfamily
LI62_RS06505	COG4771	TonB-dependent receptor
LI62_RS06510	COG2382	esterase
LI62_RS06515	COG3251	PFAM MbtH domain protein
LI62_RS06520	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LI62_RS06520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LI62_RS06525	COG1120	ATPase activity
LI62_RS06530	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS06535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS06545	COG4592	Periplasmic binding protein
LI62_RS06550	COG1169	isochorismate synthase
LI62_RS06555	COG1021	2,3-dihydroxybenzoate-AMP ligase
LI62_RS06560	COG3433	isochorismatase activity
LI62_RS06560	COG1535	isochorismatase
LI62_RS06565	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS06570	COG2050	protein possibly involved in aromatic compounds catabolism
LI62_RS06575	COG1966	Carbon starvation protein
LI62_RS06580	COG2879	small protein
LI62_RS06595	COG0371	Dehydrogenase
LI62_RS06600	COG1129	ABC transporter
LI62_RS06605	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS06620	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
LI62_RS06635	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
LI62_RS06640	COG0235	Class ii aldolase
LI62_RS06645	COG0436	Aminotransferase
LI62_RS06655	COG3969	phosphoadenosine phosphosulfate
LI62_RS06660	COG0583	DNA-binding transcription factor activity
LI62_RS06680	COG1063	alcohol dehydrogenase
LI62_RS06685	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LI62_RS06695	COG2207	Transcriptional regulator
LI62_RS06700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS06700	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS06700	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LI62_RS06705	COG1363	Peptidase, m42
LI62_RS06710	COG0006	proline dipeptidase activity
LI62_RS06715	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS06720	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS06725	COG3719	Belongs to the RNase T2 family
LI62_RS06730	COG3069	C4-dicarboxylate transmembrane transporter activity
LI62_RS06750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS06755	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS06775	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LI62_RS06780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LI62_RS06785	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LI62_RS06790	COG0583	DNA-binding transcription factor activity
LI62_RS06795	COG0321	lipoyl(octanoyl) transferase activity
LI62_RS06805	COG1686	Belongs to the peptidase S11 family
LI62_RS06810	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LI62_RS06815	COG0772	Belongs to the SEDS family
LI62_RS06820	COG0768	penicillin binding
LI62_RS06830	COG0799	negative regulation of ribosome biogenesis
LI62_RS06840	COG1466	dna polymerase III delta subunit
LI62_RS06855	COG2888	peptidyl-tyrosine sulfation
LI62_RS06860	COG1957	nucleoside hydrolase
LI62_RS06865	COG1126	abc transporter atp-binding protein
LI62_RS06870	COG0765	amino acid transport
LI62_RS06875	COG0765	amino acid transport
LI62_RS06895	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LI62_RS06900	COG1702	phosphate starvation-inducible protein PhoH
LI62_RS06905	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LI62_RS06910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LI62_RS06955	COG0367	asparagine synthase
LI62_RS06960	COG0647	UMP catabolic process
LI62_RS06965	COG1846	Transcriptional regulator
LI62_RS06965	COG1940	carbohydrate kinase activity
LI62_RS06970	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LI62_RS06980	COG2190	(PTS) system
LI62_RS06980	COG1263	PTS System
LI62_RS06980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS07000	COG0735	belongs to the Fur family
LI62_RS07015	COG0596	Alpha beta hydrolase
LI62_RS07020	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LI62_RS07025	COG0033	Phosphoglucomutase
LI62_RS07030	COG0531	amino acid
LI62_RS07035	COG1982	Orn Lys Arg decarboxylase major
LI62_RS07040	COG0745	RESPONSE REGULATOR receiver
LI62_RS07045	COG2205	protein histidine kinase activity
LI62_RS07050	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LI62_RS07055	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LI62_RS07060	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LI62_RS07080	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LI62_RS07085	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LI62_RS07090	COG1984	allophanate hydrolase subunit 2
LI62_RS07100	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LI62_RS07105	COG0372	Belongs to the citrate synthase family
LI62_RS07110	COG2009	succinate dehydrogenase
LI62_RS07115	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LI62_RS07120	COG1053	succinate dehydrogenase
LI62_RS07125	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LI62_RS07130	COG0567	Dehydrogenase, E1 component
LI62_RS07135	COG0508	dehydrogenase complex catalyzes the overall conversion of
LI62_RS07140	COG0045	succinate-CoA ligase (ADP-forming) activity
LI62_RS07145	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LI62_RS07150	COG2188	Transcriptional regulator
LI62_RS07155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS07155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS07155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS07160	COG0383	alpha-mannosidase activity
LI62_RS07165	COG1271	oxidase subunit
LI62_RS07170	COG1294	oxidase, subunit
LI62_RS07175	COG4890	Cyd operon protein YbgT
LI62_RS07180	COG3790	cyd operon protein YbgE
LI62_RS07185	COG0824	Thioesterase
LI62_RS07190	COG0811	peptide transport
LI62_RS07195	COG0848	biopolymer transport protein
LI62_RS07200	COG3064	Membrane
LI62_RS07205	COG0823	Involved in the tonB-independent uptake of proteins
LI62_RS07210	COG2885	chlorophyll binding
LI62_RS07215	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LI62_RS07250	COG3201	nicotinamide mononucleotide transporter
LI62_RS07255	COG1230	cation diffusion facilitator family transporter
LI62_RS07265	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LI62_RS07275	COG2017	converts alpha-aldose to the beta-anomer
LI62_RS07280	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LI62_RS07285	COG1085	galactose-1-phosphate uridylyltransferase
LI62_RS07290	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LI62_RS07295	COG1119	ATPase activity
LI62_RS07300	COG3585	molybdate ion transport
LI62_RS07300	COG2005	Transcriptional regulator
LI62_RS07310	COG0725	ABC transporter, periplasmic molybdate-binding protein
LI62_RS07315	COG4149	molybdate abc transporter
LI62_RS07325	COG0561	phosphatase activity
LI62_RS07330	COG2706	6-phosphogluconolactonase activity
LI62_RS07335	COG4677	pectinesterase activity
LI62_RS07345	COG0010	Belongs to the arginase family
LI62_RS07355	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LI62_RS07360	COG2986	histidine ammonia-lyase
LI62_RS07365	COG1881	PFAM PEBP family protein
LI62_RS07370	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LI62_RS07375	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LI62_RS07380	COG0156	8-amino-7-oxononanoate synthase activity
LI62_RS07385	COG2226	methyltransferase
LI62_RS07415	COG0521	Mo-molybdopterin cofactor biosynthetic process
LI62_RS07420	COG0315	cyclic pyranopterin monophosphate synthase activity
LI62_RS07425	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LI62_RS07430	COG0314	molybdopterin synthase activity
LI62_RS07435	COG0670	Belongs to the BI1 family
LI62_RS07440	COG0392	lysyltransferase activity
LI62_RS07445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LI62_RS07450	COG3568	Endonuclease Exonuclease Phosphatase
LI62_RS07460	COG0842	Transport permease protein
LI62_RS07465	COG0842	Transport permease protein
LI62_RS07470	COG1131	(ABC) transporter
LI62_RS07475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS07480	COG1309	transcriptional regulator
LI62_RS07485	COG0513	Belongs to the DEAD box helicase family
LI62_RS07490	COG1199	ATP-dependent helicase activity
LI62_RS07510	COG3121	Chaperone
LI62_RS07515	COG3539	Fimbrial protein
LI62_RS07520	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LI62_RS07530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LI62_RS07545	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
LI62_RS07550	COG0668	transmembrane transport
LI62_RS07555	COG1126	abc transporter atp-binding protein
LI62_RS07560	COG0765	amino acid transport
LI62_RS07565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS07570	COG0783	Belongs to the Dps family
LI62_RS07580	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LI62_RS07585	COG2194	sulfuric ester hydrolase activity
LI62_RS07595	COG1321	iron dependent repressor
LI62_RS07600	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LI62_RS07605	COG1566	PFAM secretion protein HlyD family protein
LI62_RS07610	COG2814	Major facilitator Superfamily
LI62_RS07620	COG0667	Aldo Keto reductase
LI62_RS07630	COG2819	hydrolase of the alpha beta superfamily
LI62_RS07635	COG2382	esterase
LI62_RS07650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS07660	COG1538	Outer membrane efflux protein
LI62_RS07665	COG2723	6-phospho-beta-galactosidase activity
LI62_RS07670	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS07675	COG2188	Transcriptional regulator
LI62_RS07680	COG1376	ErfK ybiS ycfS ynhG family protein
LI62_RS07685	COG0488	(ABC) transporter
LI62_RS07695	COG2271	Major facilitator Superfamily
LI62_RS07700	COG1609	Transcriptional regulator
LI62_RS07710	COG0561	phosphatase activity
LI62_RS07715	COG1882	Formate acetyltransferase
LI62_RS07720	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LI62_RS07725	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LI62_RS07735	COG0303	'Molybdopterin
LI62_RS07740	COG1446	asparaginase
LI62_RS07775	COG2133	pyrroloquinoline quinone binding
LI62_RS07780	COG0625	glutathione transferase activity
LI62_RS07785	COG1686	Belongs to the peptidase S11 family
LI62_RS07790	COG1349	DNA-binding transcription factor activity
LI62_RS07795	COG0671	phosphoesterase, PA-phosphatase related
LI62_RS07810	COG0561	phosphatase activity
LI62_RS07815	COG0738	Major facilitator superfamily
LI62_RS07820	COG3226	Transcriptional regulator
LI62_RS07825	COG1393	Belongs to the ArsC family
LI62_RS07830	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LI62_RS07835	COG0640	Transcriptional regulator
LI62_RS07865	COG0778	Nitroreductase
LI62_RS07880	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LI62_RS07885	COG3842	ATPase activity
LI62_RS07890	COG1176	ABC-type spermidine putrescine transport system, permease component I
LI62_RS07895	COG1177	transmembrane transport
LI62_RS07905	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LI62_RS07915	COG0745	RESPONSE REGULATOR receiver
LI62_RS07920	COG5002	protein histidine kinase activity
LI62_RS07925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS07930	COG4160	amino acid transport
LI62_RS07935	COG4215	(ABC) transporter
LI62_RS07940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS07945	COG1126	abc transporter atp-binding protein
LI62_RS07955	COG0393	Putative heavy-metal-binding
LI62_RS07960	COG3023	N-Acetylmuramoyl-L-alanine amidase
LI62_RS07980	COG3031	protein transport across the cell outer membrane
LI62_RS07985	COG1450	Type ii and iii secretion system protein
LI62_RS07990	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LI62_RS08000	COG2165	general secretion pathway protein
LI62_RS08010	COG2165	general secretion pathway protein
LI62_RS08035	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LI62_RS08050	COG3397	chitin binding
LI62_RS08055	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LI62_RS08060	COG0702	epimerase
LI62_RS08065	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LI62_RS08070	COG0028	Belongs to the TPP enzyme family
LI62_RS08075	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LI62_RS08080	COG1151	hydroxylamine reductase activity
LI62_RS08085	COG2431	L-lysine efflux transmembrane transporter activity
LI62_RS08095	COG3593	DNA synthesis involved in DNA repair
LI62_RS08100	COG2990	Protein conserved in bacteria
LI62_RS08105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS08115	COG1278	Cold shock
LI62_RS08120	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LI62_RS08125	COG0542	response to heat
LI62_RS08130	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LI62_RS08135	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LI62_RS08140	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LI62_RS08145	COG4988	ABC transporter
LI62_RS08150	COG0492	ferredoxin-NADP+ reductase activity
LI62_RS08160	COG1674	ftsk spoiiie
LI62_RS08160	COG1178	ABC-type Fe3 transport system permease component
LI62_RS08165	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LI62_RS08170	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LI62_RS08175	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LI62_RS08180	COG0243	molybdopterin cofactor binding
LI62_RS08185	COG0437	4 iron, 4 sulfur cluster binding
LI62_RS08190	COG3302	dmso reductase anchor subunit
LI62_RS08195	COG0477	Major facilitator Superfamily
LI62_RS08205	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LI62_RS08210	COG1882	Formate acetyltransferase
LI62_RS08215	COG2116	formate transmembrane transporter activity
LI62_RS08220	COG1944	ATP diphosphatase activity
LI62_RS08225	COG2323	membrane
LI62_RS08230	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LI62_RS08235	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LI62_RS08240	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LI62_RS08245	COG0539	negative regulation of cytoplasmic translation
LI62_RS08250	COG0776	regulation of translation
LI62_RS08255	COG2333	competence protein COMEC
LI62_RS08255	COG0658	competence protein
LI62_RS08260	COG1132	(ABC) transporter
LI62_RS08270	COG3214	Protein conserved in bacteria
LI62_RS08275	COG2835	tetraacyldisaccharide 4'-kinase activity
LI62_RS08280	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LI62_RS08285	COG3173	Aminoglycoside phosphotransferase
LI62_RS08290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LI62_RS08295	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LI62_RS08305	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
LI62_RS08310	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LI62_RS08315	COG2989	Protein conserved in bacteria
LI62_RS08320	COG3108	Peptidase M15
LI62_RS08325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LI62_RS08330	COG1448	Aminotransferase
LI62_RS08340	COG0017	Asparaginyl-tRNA synthetase
LI62_RS08345	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LI62_RS08350	COG0308	aminopeptidase N
LI62_RS08360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LI62_RS08365	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS08370	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LI62_RS08375	COG0431	NADPH-dependent FMN reductase
LI62_RS08380	COG0167	dihydroorotate dehydrogenase activity
LI62_RS08390	COG0633	Ferredoxin
LI62_RS08390	COG3217	Mosc domain protein beta barrel domain protein
LI62_RS08395	COG0116	Belongs to the methyltransferase superfamily
LI62_RS08395	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LI62_RS08400	COG0488	(ABC) transporter
LI62_RS08405	COG2995	paraquat-inducible protein a
LI62_RS08410	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LI62_RS08410	COG3008	intermembrane lipid transfer
LI62_RS08415	COG3009	Protein conserved in bacteria
LI62_RS08420	COG3130	regulation of translation
LI62_RS08430	COG1067	ATP-dependent peptidase activity
LI62_RS08435	COG3120	sequence-specific DNA binding
LI62_RS08445	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
LI62_RS08450	COG3070	regulator of competence-specific genes
LI62_RS08455	COG1289	transmembrane transporter activity
LI62_RS08460	COG3304	Inner membrane component domain
LI62_RS08465	COG0210	DNA helicase
LI62_RS08470	COG1803	Methylglyoxal synthase
LI62_RS08475	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LI62_RS08480	COG1832	CoA-binding protein
LI62_RS08490	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LI62_RS08495	COG1254	Belongs to the acylphosphatase family
LI62_RS08505	COG0670	Belongs to the BI1 family
LI62_RS08520	COG1120	ATPase activity
LI62_RS08525	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS08535	COG3264	Mechanosensitive ion channel
LI62_RS08535	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LI62_RS08550	COG2239	Acts as a magnesium transporter
LI62_RS08555	COG0586	Pfam SNARE associated Golgi protein
LI62_RS08560	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS08565	COG1733	regulation of RNA biosynthetic process
LI62_RS08605	COG3729	General stress protein
LI62_RS08625	COG2233	PERMEase
LI62_RS08630	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LI62_RS08635	COG0778	Nitroreductase
LI62_RS08640	COG2267	carboxylic ester hydrolase activity
LI62_RS08645	COG0251	oxidation-reduction process
LI62_RS08650	COG1335	isochorismatase
LI62_RS08655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS08660	COG1309	transcriptional regulator
LI62_RS08670	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LI62_RS08670	COG0506	proline dehydrogenase activity
LI62_RS08670	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LI62_RS08675	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LI62_RS08685	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LI62_RS08695	COG2822	iron ion transport
LI62_RS08705	COG1702	phosphate starvation-inducible protein PhoH
LI62_RS08710	COG1115	amino acid carrier protein
LI62_RS08720	COG1335	isochorismatase
LI62_RS08730	COG0583	DNA-binding transcription factor activity
LI62_RS08740	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LI62_RS08745	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LI62_RS08750	COG3381	protein complex oligomerization
LI62_RS08800	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LI62_RS08815	COG2943	transferase activity, transferring hexosyl groups
LI62_RS08820	COG5645	(Lipo)protein
LI62_RS08835	COG1560	Kdo2-lipid A biosynthetic process
LI62_RS08840	COG1054	Belongs to the UPF0176 family
LI62_RS08845	COG2353	YceI-like domain
LI62_RS08850	COG3038	cytochrome b561
LI62_RS08875	COG0418	dihydroorotase activity
LI62_RS08885	COG0477	Major facilitator Superfamily
LI62_RS08890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LI62_RS08895	COG3132	Protein of unknown function, DUF480
LI62_RS08930	COG1558	bacterial-type flagellum-dependent cell motility
LI62_RS08940	COG1749	Flagellar hook protein flgE
LI62_RS08950	COG4786	Flagellar basal body rod
LI62_RS08970	COG1256	bacterial-type flagellum assembly
LI62_RS08980	COG2814	Major facilitator Superfamily
LI62_RS08985	COG0583	DNA-binding transcription factor activity
LI62_RS08990	COG1530	ribonuclease E activity
LI62_RS08995	COG0564	pseudouridine synthase activity
LI62_RS09000	COG0424	maF-like protein
LI62_RS09010	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LI62_RS09015	COG0416	fatty acid biosynthetic process
LI62_RS09020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LI62_RS09035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LI62_RS09040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LI62_RS09045	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LI62_RS09050	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LI62_RS09055	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LI62_RS09060	COG0470	DNA polymerase III
LI62_RS09065	COG0084	hydrolase, TatD family'
LI62_RS09075	COG4773	Receptor
LI62_RS09080	COG0537	adenosine 5'-monophosphoramidase activity
LI62_RS09085	COG5633	Lipoprotein
LI62_RS09090	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
LI62_RS09105	COG3150	esterase
LI62_RS09110	COG1252	NADH dehydrogenase
LI62_RS09115	COG3134	Outer membrane lipoprotein
LI62_RS09120	COG1309	transcriptional regulator
LI62_RS09130	COG1388	LysM domain
LI62_RS09130	COG1376	ErfK ybiS ycfS ynhG family protein
LI62_RS09135	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LI62_RS09140	COG4763	Acyl-transferase
LI62_RS09145	COG4591	ABC-type transport system involved in lipoprotein release permease component
LI62_RS09150	COG1136	(ABC) transporter
LI62_RS09155	COG4591	ABC-type transport system involved in lipoprotein release permease component
LI62_RS09200	COG1943	Transposase
LI62_RS09205	COG2850	peptidyl-arginine hydroxylation
LI62_RS09210	COG2205	protein histidine kinase activity
LI62_RS09225	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LI62_RS09230	COG2915	High frequency lysogenization protein hflD homolog
LI62_RS09245	COG1187	pseudouridine synthase activity
LI62_RS09250	COG0538	isocitrate dehydrogenase activity
LI62_RS09260	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LI62_RS09265	COG2261	transglycosylase associated protein
LI62_RS09270	COG2199	diguanylate cyclase activity
LI62_RS09270	COG2203	Gaf domain
LI62_RS09275	COG3042	response to heat
LI62_RS09285	COG3189	MarR family transcriptional regulator
LI62_RS09290	COG0504	CTP synthase activity
LI62_RS09295	COG2807	transmembrane transport
LI62_RS09300	COG2207	Transcriptional regulator
LI62_RS09305	COG2707	UPF0756 membrane protein
LI62_RS09315	COG2211	Major facilitator Superfamily
LI62_RS09320	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LI62_RS09325	COG0582	viral genome integration into host DNA
LI62_RS09390	COG1802	Transcriptional regulator
LI62_RS09390	COG4626	Terminase
LI62_RS09425	COG1403	HNH endonuclease
LI62_RS09450	COG3179	chitinase
LI62_RS09605	COG2718	Belongs to the UPF0229 family
LI62_RS09610	COG2766	serine protein kinase
LI62_RS09615	COG3713	MltA-interacting MipA family protein
LI62_RS09635	COG3139	Protein of unknown function (DUF1315)
LI62_RS09645	COG1335	isochorismatase
LI62_RS09650	COG0252	asparaginase activity
LI62_RS09655	COG0616	signal peptide processing
LI62_RS09660	COG0778	Nitroreductase
LI62_RS09665	COG0709	Synthesizes selenophosphate from selenide and ATP
LI62_RS09670	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LI62_RS09685	COG0494	nUDIX hydrolase
LI62_RS09690	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LI62_RS09695	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LI62_RS09700	COG2897	thiosulfate sulfurtransferase activity
LI62_RS09705	COG4136	ATPase activity
LI62_RS09710	COG4135	transport system, permease component
LI62_RS09715	COG4134	Bacterial extracellular solute-binding protein
LI62_RS09725	COG0708	Exodeoxyribonuclease III
LI62_RS09735	COG3138	arginine N-succinyltransferase
LI62_RS09740	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS09745	COG3724	N-succinylarginine dihydrolase activity
LI62_RS09755	COG3678	ATP-independent chaperone mediated protein folding
LI62_RS09765	COG0322	excinuclease ABC activity
LI62_RS09775	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS09780	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS09785	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS09790	COG1447	Phosphotransferase system cellobiose-specific component IIA
LI62_RS09795	COG2169	Transcriptional regulator
LI62_RS09795	COG1917	Cupin 2, conserved barrel domain protein
LI62_RS09800	COG1486	melibiose metabolic process
LI62_RS09805	COG3394	polysaccharide catabolic process
LI62_RS09810	COG0753	catalase activity
LI62_RS09820	COG1823	symporter activity
LI62_RS09825	COG1988	membrane-bound metal-dependent
LI62_RS09830	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS09835	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS09845	COG3001	Fructosamine kinase
LI62_RS09855	COG1105	Belongs to the carbohydrate kinase PfkB family
LI62_RS09860	COG3137	Salt-induced outer membrane protein
LI62_RS09890	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LI62_RS09895	COG0072	phenylalanine-tRNA ligase activity
LI62_RS09895	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LI62_RS09900	COG0776	regulation of translation
LI62_RS09910	COG0386	Belongs to the glutathione peroxidase family
LI62_RS09920	COG0791	NLP P60 protein
LI62_RS09930	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LI62_RS09940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS09945	COG4558	Periplasmic binding protein
LI62_RS09950	COG3720	iron ion transport
LI62_RS09960	COG4256	Hemin uptake protein
LI62_RS09965	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LI62_RS09970	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LI62_RS09975	COG0574	Belongs to the PEP-utilizing enzyme family
LI62_RS09975	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LI62_RS09980	COG2211	Major facilitator Superfamily
LI62_RS09985	COG1472	Belongs to the glycosyl hydrolase 3 family
LI62_RS09990	COG0628	permease
LI62_RS09995	COG0277	FAD linked oxidase domain protein
LI62_RS09995	COG0247	lactate metabolic process
LI62_RS10000	COG2050	protein possibly involved in aromatic compounds catabolism
LI62_RS10010	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LI62_RS10025	COG3121	Chaperone
LI62_RS10050	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS10070	COG2200	EAL domain
LI62_RS10075	COG0789	Transcriptional regulator
LI62_RS10080	COG0316	Belongs to the HesB IscA family
LI62_RS10085	COG0719	Fe-S assembly protein
LI62_RS10090	COG0396	ATPase activity
LI62_RS10095	COG0719	Fe-S assembly protein
LI62_RS10100	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LI62_RS10105	COG2166	iron-sulfur cluster assembly
LI62_RS10110	COG1376	ErfK ybiS ycfS ynhG family protein
LI62_RS10125	COG0626	cystathionine gamma-synthase activity
LI62_RS10140	COG2011	ABC-type metal ion transport system permease component
LI62_RS10145	COG1464	Belongs to the NlpA lipoprotein family
LI62_RS10155	COG0765	amino acid transport
LI62_RS10160	COG0765	amino acid transport
LI62_RS10170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS10190	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LI62_RS10200	COG4529	Protein conserved in bacteria
LI62_RS10210	COG0071	Belongs to the small heat shock protein (HSP20) family
LI62_RS10230	COG0307	riboflavin synthase, alpha
LI62_RS10235	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LI62_RS10240	COG2814	Major facilitator Superfamily
LI62_RS10245	COG0583	DNA-binding transcription factor activity
LI62_RS10260	COG2814	Major facilitator Superfamily
LI62_RS10270	COG0791	NLP P60 protein
LI62_RS10275	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LI62_RS10285	COG0346	lactoylglutathione lyase activity
LI62_RS10290	COG1902	pentaerythritol trinitrate reductase activity
LI62_RS10295	COG1309	transcriptional regulator
LI62_RS10300	COG2194	sulfuric ester hydrolase activity
LI62_RS10305	COG3313	Fe-S protein
LI62_RS10310	COG4989	oxidoreductase activity
LI62_RS10315	COG2032	superoxide dismutase activity
LI62_RS10320	COG1289	transmembrane transporter activity
LI62_RS10325	COG1566	PFAM secretion protein HlyD family protein
LI62_RS10340	COG3706	GGDEF domain
LI62_RS10350	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LI62_RS10355	COG3895	Periplasmic Protein
LI62_RS10360	COG0259	pyridoxamine-phosphate oxidase activity
LI62_RS10365	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LI62_RS10370	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
LI62_RS10375	COG0625	glutathione transferase activity
LI62_RS10380	COG3104	oligopeptide transport
LI62_RS10385	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LI62_RS10435	COG0673	inositol 2-dehydrogenase activity
LI62_RS10440	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LI62_RS10445	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LI62_RS10450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS10450	COG1263	PTS System
LI62_RS10455	COG1609	Transcriptional regulator
LI62_RS10460	COG5339	Protein conserved in bacteria
LI62_RS10470	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LI62_RS10470	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LI62_RS10485	COG2205	protein histidine kinase activity
LI62_RS10495	COG1278	Cold shock
LI62_RS10505	COG0745	RESPONSE REGULATOR receiver
LI62_RS10510	COG3136	membrane protein required for alginate biosynthesis
LI62_RS10515	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS10520	COG0531	amino acid
LI62_RS10530	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LI62_RS10535	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LI62_RS10540	COG0668	transmembrane transport
LI62_RS10545	COG0589	response to stress
LI62_RS10555	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LI62_RS10560	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LI62_RS10565	COG1473	amidohydrolase
LI62_RS10575	COG0583	DNA-binding transcription factor activity
LI62_RS10580	COG2840	Smr protein MutS2
LI62_RS10590	COG0667	Aldo Keto reductase
LI62_RS10605	COG4993	Dehydrogenase
LI62_RS10640	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LI62_RS10650	COG1403	HNH endonuclease
LI62_RS10655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS10665	COG0628	permease
LI62_RS10670	COG2076	Multidrug Resistance protein
LI62_RS10675	COG2076	Multidrug Resistance protein
LI62_RS10680	COG3591	Belongs to the peptidase S1B family
LI62_RS10690	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LI62_RS10695	COG2814	Major facilitator Superfamily
LI62_RS10700	COG0583	DNA-binding transcription factor activity
LI62_RS10705	COG1940	carbohydrate kinase activity
LI62_RS10710	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LI62_RS10770	COG3141	response to X-ray
LI62_RS10775	COG3381	protein complex oligomerization
LI62_RS10780	COG3302	dmso reductase anchor subunit
LI62_RS10785	COG0437	4 iron, 4 sulfur cluster binding
LI62_RS10790	COG0243	molybdopterin cofactor binding
LI62_RS10810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LI62_RS10825	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS10830	COG1063	alcohol dehydrogenase
LI62_RS10835	COG0477	Major facilitator Superfamily
LI62_RS10840	COG1904	glucuronate isomerase
LI62_RS10850	COG0246	Mannitol dehydrogenase
LI62_RS10860	COG0589	response to stress
LI62_RS10865	COG1802	Transcriptional regulator
LI62_RS10870	COG4221	oxidoreductase activity
LI62_RS10885	COG4773	Receptor
LI62_RS10900	COG0725	ABC transporter, periplasmic molybdate-binding protein
LI62_RS10905	COG1176	ABC-type spermidine putrescine transport system, permease component I
LI62_RS10915	COG0814	amino acid
LI62_RS10925	COG4993	Dehydrogenase
LI62_RS10940	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LI62_RS10945	COG2911	Protein conserved in bacteria
LI62_RS10955	COG3784	Protein of unknown function (DUF1318)
LI62_RS10960	COG2207	Transcriptional regulator
LI62_RS10965	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS10970	COG2203	Gaf domain
LI62_RS10970	COG3706	GGDEF domain
LI62_RS10970	COG4251	negative regulation of phosphorylation
LI62_RS10970	COG5001	Diguanylate cyclase
LI62_RS10975	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LI62_RS10980	COG3733	amine oxidase
LI62_RS10985	COG2030	dehydratase
LI62_RS10985	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS10990	COG3396	Phenylacetate-CoA oxygenase
LI62_RS10995	COG3460	Phenylacetate-CoA oxygenase
LI62_RS11000	COG3396	Phenylacetate-CoA oxygenase
LI62_RS11005	COG2151	metal-sulfur cluster biosynthetic enzyme
LI62_RS11010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LI62_RS11015	COG1024	Enoyl-CoA hydratase
LI62_RS11020	COG1024	Enoyl-CoA hydratase
LI62_RS11025	COG1250	3-hydroxyacyl-CoA dehydrogenase
LI62_RS11030	COG2050	protein possibly involved in aromatic compounds catabolism
LI62_RS11035	COG0183	Belongs to the thiolase family
LI62_RS11040	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
LI62_RS11045	COG3327	negative regulation of DNA-templated transcription, initiation
LI62_RS11050	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LI62_RS11060	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LI62_RS11080	COG0300	oxidoreductase activity
LI62_RS11095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LI62_RS11140	COG3122	Protein conserved in bacteria
LI62_RS11145	COG0564	pseudouridine synthase activity
LI62_RS11155	COG1643	Atp-dependent helicase
LI62_RS11160	COG4122	O-methyltransferase activity
LI62_RS11180	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LI62_RS11185	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS11190	COG3038	cytochrome b561
LI62_RS11195	COG0673	inositol 2-dehydrogenase activity
LI62_RS11200	COG1349	DNA-binding transcription factor activity
LI62_RS11215	COG2274	protein secretion by the type I secretion system
LI62_RS11275	COG0840	transmembrane signaling receptor activity
LI62_RS11280	COG0583	DNA-binding transcription factor activity
LI62_RS11285	COG5383	Protein conserved in bacteria
LI62_RS11290	COG2272	Belongs to the type-B carboxylesterase lipase family
LI62_RS11300	COG0436	Aminotransferase
LI62_RS11310	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LI62_RS11315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LI62_RS11320	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LI62_RS11325	COG1275	C4-dicarboxylate transporter malic acid transport protein
LI62_RS11330	COG0500	methyltransferase
LI62_RS11335	COG2195	Cleaves the N-terminal amino acid of tripeptides
LI62_RS11340	COG0747	negative chemotaxis
LI62_RS11360	COG3135	benzoate transporter
LI62_RS11365	COG1396	sequence-specific DNA binding
LI62_RS11370	COG0826	peptidase U32
LI62_RS11395	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LI62_RS11410	COG1122	ATPase activity
LI62_RS11420	COG3443	Belongs to the bacterial solute-binding protein 9 family
LI62_RS11425	COG2814	Major facilitator Superfamily
LI62_RS11430	COG0697	spore germination
LI62_RS11445	COG1846	Transcriptional regulator
LI62_RS11455	COG2814	Major facilitator Superfamily
LI62_RS11470	COG0583	DNA-binding transcription factor activity
LI62_RS11475	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS11485	COG2066	Belongs to the glutaminase family
LI62_RS11495	COG3706	GGDEF domain
LI62_RS11505	COG0246	Mannitol dehydrogenase
LI62_RS11510	COG3781	membrane
LI62_RS11535	COG0596	Alpha beta hydrolase
LI62_RS11560	COG0494	nUDIX hydrolase
LI62_RS11565	COG1349	DNA-binding transcription factor activity
LI62_RS11585	COG2814	Major facilitator Superfamily
LI62_RS11590	COG1979	alcohol dehydrogenase
LI62_RS11620	COG2801	Transposase and inactivated derivatives
LI62_RS11640	COG2814	Major facilitator Superfamily
LI62_RS11675	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LI62_RS11685	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS11690	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LI62_RS11700	COG0583	DNA-binding transcription factor activity
LI62_RS11710	COG0583	DNA-binding transcription factor activity
LI62_RS11715	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LI62_RS11720	COG4628	conserved protein (DUF2132)
LI62_RS11725	COG1649	PFAM Uncharacterised BCR, COG1649
LI62_RS11730	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LI62_RS11745	COG0840	transmembrane signaling receptor activity
LI62_RS11775	COG2200	EAL domain
LI62_RS11790	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
LI62_RS11795	COG0747	negative chemotaxis
LI62_RS11800	COG0601	transmembrane transport
LI62_RS11805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LI62_RS11810	COG0444	Belongs to the ABC transporter superfamily
LI62_RS11815	COG4608	Belongs to the ABC transporter superfamily
LI62_RS11820	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS11830	COG1764	response to oxidative stress
LI62_RS11860	COG0281	malic enzyme
LI62_RS11865	COG0488	(ABC) transporter
LI62_RS11870	COG1064	alcohol dehydrogenase
LI62_RS11880	COG1252	NADH dehydrogenase
LI62_RS11885	COG2814	Major facilitator Superfamily
LI62_RS11895	COG2864	formate dehydrogenase
LI62_RS11900	COG0437	4 iron, 4 sulfur cluster binding
LI62_RS11905	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS11905	COG0243	molybdopterin cofactor binding
LI62_RS11910	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS11910	COG0243	molybdopterin cofactor binding
LI62_RS11935	COG2223	nitrite transmembrane transporter activity
LI62_RS11940	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LI62_RS11945	COG1140	nitrate reductase beta subunit
LI62_RS11950	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LI62_RS11955	COG2181	nitrate reductase activity
LI62_RS11960	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LI62_RS11965	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LI62_RS11980	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LI62_RS11985	COG0640	Transcriptional regulator
LI62_RS11995	COG1560	Kdo2-lipid A biosynthetic process
LI62_RS12000	COG1942	4-Oxalocrotonate Tautomerase
LI62_RS12005	COG0625	glutathione transferase activity
LI62_RS12015	COG1126	abc transporter atp-binding protein
LI62_RS12030	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LI62_RS12035	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS12040	COG1473	amidohydrolase
LI62_RS12045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS12075	COG4772	TonB-dependent receptor
LI62_RS12080	COG1802	Transcriptional regulator
LI62_RS12085	COG2130	NADP-dependent
LI62_RS12095	COG1247	-acetyltransferase
LI62_RS12100	COG3238	Protein conserved in bacteria
LI62_RS12110	COG0747	negative chemotaxis
LI62_RS12140	COG3615	Tellurite resistance protein tehB
LI62_RS12145	COG3615	Tellurite resistance protein tehB
LI62_RS12155	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS12160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LI62_RS12170	COG1271	oxidase subunit
LI62_RS12175	COG1294	oxidase, subunit
LI62_RS12185	COG3187	Heat shock protein
LI62_RS12190	COG3042	response to heat
LI62_RS12195	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LI62_RS12195	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LI62_RS12195	COG1013	pyruvate-flavodoxin oxidoreductase activity
LI62_RS12195	COG0674	pyruvate-flavodoxin oxidoreductase activity
LI62_RS12205	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LI62_RS12225	COG0513	Belongs to the DEAD box helicase family
LI62_RS12240	COG0840	transmembrane signaling receptor activity
LI62_RS12340	COG3179	chitinase
LI62_RS12385	COG4166	transmembrane transport
LI62_RS12390	COG2866	Carboxypeptidase
LI62_RS12395	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS12400	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LI62_RS12410	COG3768	UPF0283 membrane protein
LI62_RS12415	COG3106	COG3106 Predicted ATPase
LI62_RS12420	COG1609	Transcriptional regulator
LI62_RS12430	COG3842	ATPase activity
LI62_RS12435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS12440	COG1554	hydrolase, family 65, central catalytic
LI62_RS12445	COG0673	inositol 2-dehydrogenase activity
LI62_RS12450	COG1082	Xylose isomerase domain protein TIM barrel
LI62_RS12455	COG1063	alcohol dehydrogenase
LI62_RS12460	COG0395	ABC-type sugar transport system, permease component
LI62_RS12465	COG1175	transmembrane transport
LI62_RS12470	COG1653	transport
LI62_RS12475	COG0366	Alpha amylase catalytic
LI62_RS12485	COG1983	PspC domain protein
LI62_RS12495	COG1842	Phage shock protein A
LI62_RS12500	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LI62_RS12515	COG4171	peptide transport system, permease
LI62_RS12525	COG4172	Belongs to the ABC transporter superfamily
LI62_RS12535	COG0251	oxidation-reduction process
LI62_RS12540	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LI62_RS12545	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LI62_RS12545	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LI62_RS12555	COG5001	Diguanylate cyclase
LI62_RS12560	COG1024	Enoyl-CoA hydratase
LI62_RS12570	COG1349	DNA-binding transcription factor activity
LI62_RS12580	COG0023	Translation Initiation Factor
LI62_RS12585	COG0284	orotidine-5'-phosphate decarboxylase activity
LI62_RS12590	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LI62_RS12595	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LI62_RS12600	COG0671	phosphoesterase, PA-phosphatase related
LI62_RS12610	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LI62_RS12645	COG0616	signal peptide processing
LI62_RS12650	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS12655	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
LI62_RS12665	COG0009	L-threonylcarbamoyladenylate synthase
LI62_RS12680	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LI62_RS12680	COG0512	Glutamine amidotransferase of anthranilate synthase
LI62_RS12690	COG0133	tryptophan synthase activity
LI62_RS12695	COG0159	tryptophan synthase activity
LI62_RS12700	COG2391	methyltransferase activity
LI62_RS12705	COG0425	Belongs to the sulfur carrier protein TusA family
LI62_RS12710	COG3047	cAMP biosynthetic process
LI62_RS12715	COG0727	PFAM Uncharacterised protein family (UPF0153)
LI62_RS12745	COG2350	Protein conserved in bacteria
LI62_RS12750	COG1280	lysine exporter protein (LysE YggA)
LI62_RS12765	COG3099	Belongs to the UPF0263 family
LI62_RS12770	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LI62_RS12775	COG4608	Belongs to the ABC transporter superfamily
LI62_RS12780	COG0444	Belongs to the ABC transporter superfamily
LI62_RS12800	COG2095	MarC family integral membrane protein
LI62_RS12805	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS12805	COG1454	alcohol dehydrogenase
LI62_RS12810	COG1435	thymidine kinase activity
LI62_RS12820	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LI62_RS12825	COG0745	RESPONSE REGULATOR receiver
LI62_RS12830	COG1752	Esterase of the alpha-beta hydrolase superfamily
LI62_RS12835	COG3012	SEC-C Motif Domain Protein
LI62_RS12840	COG0788	formyltetrahydrofolate deformylase activity
LI62_RS12855	COG2181	nitrate reductase activity
LI62_RS12860	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LI62_RS12865	COG1140	nitrate reductase beta subunit
LI62_RS12870	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LI62_RS12875	COG2223	nitrite transmembrane transporter activity
LI62_RS12880	COG3850	Histidine kinase
LI62_RS12885	COG2197	response regulator
LI62_RS12890	COG4932	domain protein
LI62_RS12895	COG0243	molybdopterin cofactor binding
LI62_RS12900	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LI62_RS12900	COG2146	nitrite reductase [NAD(P)H] activity
LI62_RS12905	COG1116	anion transmembrane transporter activity
LI62_RS12915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LI62_RS12920	COG3707	response regulator
LI62_RS12925	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LI62_RS12930	COG0840	transmembrane signaling receptor activity
LI62_RS12940	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
LI62_RS12945	COG4572	Cation transport regulator
LI62_RS12950	COG0387	Pfam Sodium calcium exchanger
LI62_RS12955	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LI62_RS12970	COG2890	protein-(glutamine-N5) methyltransferase activity
LI62_RS12980	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LI62_RS12990	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LI62_RS13000	COG0659	secondary active sulfate transmembrane transporter activity
LI62_RS13015	COG0193	aminoacyl-tRNA hydrolase activity
LI62_RS13020	COG0012	GTP binding
LI62_RS13055	COG3209	COG3209 Rhs family protein
LI62_RS13080	COG0515	serine threonine protein kinase
LI62_RS13195	COG4977	sequence-specific DNA binding
LI62_RS13215	COG4774	siderophore transport
LI62_RS13225	COG0741	lytic transglycosylase activity
LI62_RS13230	COG1619	proteins homologs of microcin C7 resistance protein MccF
LI62_RS13235	COG3263	regulation of cellular component size
LI62_RS13240	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LI62_RS13245	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LI62_RS13255	COG2719	SpoVR family
LI62_RS13265	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LI62_RS13275	COG2983	Belongs to the UPF0260 family
LI62_RS13280	COG0179	Fumarylacetoacetate (FAA) hydrolase
LI62_RS13290	COG0850	regulation of cytokinetic process
LI62_RS13295	COG2894	cell division
LI62_RS13300	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LI62_RS13305	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LI62_RS13310	COG0318	PFAM AMP-dependent synthetase and ligase
LI62_RS13315	COG3065	identical protein binding
LI62_RS13320	COG1214	PFAM Peptidase M22, glycoprotease
LI62_RS13325	COG1199	ATP-dependent helicase activity
LI62_RS13330	COG0251	oxidation-reduction process
LI62_RS13345	COG0494	nUDIX hydrolase
LI62_RS13350	COG1760	l-serine dehydratase
LI62_RS13355	COG2200	EAL domain
LI62_RS13360	COG1253	flavin adenine dinucleotide binding
LI62_RS13365	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS13365	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS13370	COG3715	PTS system
LI62_RS13375	COG3716	PTS system mannose fructose sorbose family IID component
LI62_RS13380	COG4811	Protein of unknown function (DUF986)
LI62_RS13385	COG1971	Probably functions as a manganese efflux pump
LI62_RS13390	COG2226	methyltransferase
LI62_RS13395	COG0768	penicillin binding
LI62_RS13425	COG1414	Transcriptional regulator
LI62_RS13430	COG2814	Major facilitator Superfamily
LI62_RS13435	COG0501	Belongs to the peptidase M48B family
LI62_RS13445	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
LI62_RS13450	COG1956	GAF domain-containing protein
LI62_RS13455	COG2995	paraquat-inducible protein a
LI62_RS13460	COG3008	intermembrane lipid transfer
LI62_RS13465	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LI62_RS13465	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
LI62_RS13480	COG2990	Protein conserved in bacteria
LI62_RS13495	COG1276	copper resistance
LI62_RS13500	COG2372	response to copper ion
LI62_RS13510	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LI62_RS13515	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LI62_RS13520	COG1770	oligopeptidase
LI62_RS13525	COG2979	Protein of unknown function (DUF533)
LI62_RS13535	COG0800	Aldolase
LI62_RS13540	COG0129	dihydroxy-acid dehydratase activity
LI62_RS13545	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LI62_RS13550	COG1737	Transcriptional regulator
LI62_RS13560	COG1560	Kdo2-lipid A biosynthetic process
LI62_RS13565	COG0739	heme binding
LI62_RS13570	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LI62_RS13580	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LI62_RS13585	COG2255	four-way junction helicase activity
LI62_RS13590	COG0632	four-way junction helicase activity
LI62_RS13605	COG0494	nUDIX hydrolase
LI62_RS13615	COG1335	isochorismatase
LI62_RS13620	COG1801	Protein of unknown function DUF72
LI62_RS13625	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LI62_RS13630	COG2226	methyltransferase
LI62_RS13635	COG0500	methyltransferase
LI62_RS13640	COG3142	Participates in the control of copper homeostasis
LI62_RS13645	COG3102	Protein conserved in bacteria
LI62_RS13650	COG0018	arginyl-trna synthetase
LI62_RS13655	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
LI62_RS13685	COG0745	RESPONSE REGULATOR receiver
LI62_RS13700	COG0840	transmembrane signaling receptor activity
LI62_RS13735	COG1301	dicarboxylic acid transport
LI62_RS13775	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
LI62_RS13785	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS13795	COG1879	ABC-type sugar transport system periplasmic component
LI62_RS13805	COG1528	Iron-storage protein
LI62_RS13810	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LI62_RS13835	COG1528	Iron-storage protein
LI62_RS13845	COG0814	amino acid
LI62_RS13850	COG3012	SEC-C Motif Domain Protein
LI62_RS13850	COG3318	Belongs to the UPF0149 family
LI62_RS13885	COG0583	DNA-binding transcription factor activity
LI62_RS13925	COG2197	response regulator
LI62_RS13935	COG2197	response regulator
LI62_RS13940	COG1126	abc transporter atp-binding protein
LI62_RS13945	COG0765	amino acid transport
LI62_RS13955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS13975	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LI62_RS13980	COG1516	flagellar protein fliS
LI62_RS13990	COG0366	Alpha amylase catalytic
LI62_RS14000	COG1677	Flagellar hook-basal body complex protein FliE
LI62_RS14010	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LI62_RS14020	COG1157	protein secretion by the type III secretion system
LI62_RS14060	COG1987	bacterial-type flagellum assembly
LI62_RS14070	COG2197	response regulator
LI62_RS14095	COG5475	Uncharacterized small protein (DUF2158)
LI62_RS14100	COG2354	Protein conserved in bacteria
LI62_RS14105	COG0697	spore germination
LI62_RS14110	COG3727	T/G mismatch-specific endonuclease activity
LI62_RS14115	COG0270	DNA (cytosine-5-)-methyltransferase activity
LI62_RS14120	COG1418	mRNA catabolic process
LI62_RS14125	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LI62_RS14135	COG3290	protein histidine kinase activity
LI62_RS14140	COG4565	transcriptional regulatory protein
LI62_RS14160	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LI62_RS14160	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LI62_RS14185	COG0583	DNA-binding transcription factor activity
LI62_RS14235	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
LI62_RS14255	COG1376	ErfK ybiS ycfS ynhG family protein
LI62_RS14260	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LI62_RS14265	COG0589	response to stress
LI62_RS14275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS14290	COG0477	Major facilitator Superfamily
LI62_RS14295	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LI62_RS14305	COG0534	Mate efflux family protein
LI62_RS14320	COG1289	transmembrane transporter activity
LI62_RS14325	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LI62_RS14335	COG2925	Exonuclease
LI62_RS14340	COG0531	amino acid
LI62_RS14345	COG0583	DNA-binding transcription factor activity
LI62_RS14350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LI62_RS14355	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LI62_RS14360	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LI62_RS14365	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LI62_RS14375	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LI62_RS14380	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LI62_RS14385	COG0107	imidazoleglycerol-phosphate synthase activity
LI62_RS14410	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LI62_RS14425	COG2843	Capsule synthesis protein
LI62_RS14455	COG1216	Glycosyl transferase, family 2
LI62_RS14465	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LI62_RS14470	COG1091	dTDP-4-dehydrorhamnose reductase activity
LI62_RS14475	COG1088	dTDP-glucose 4,6-dehydratase activity
LI62_RS14490	COG0438	transferase activity, transferring glycosyl groups
LI62_RS14495	COG2327	Polysaccharide pyruvyl transferase
LI62_RS14500	COG2244	polysaccharide biosynthetic process
LI62_RS14505	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LI62_RS14510	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LI62_RS14520	COG0297	glycogen (starch) synthase activity
LI62_RS14525	COG1051	belongs to the nudix hydrolase family
LI62_RS14530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LI62_RS14535	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
LI62_RS14540	COG0110	maltose O-acetyltransferase activity
LI62_RS14545	COG1216	Glycosyl transferase, family 2
LI62_RS14555	COG0438	transferase activity, transferring glycosyl groups
LI62_RS14560	COG1045	serine acetyltransferase
LI62_RS14565	COG0463	Glycosyl transferase, family 2
LI62_RS14570	COG0489	protein tyrosine kinase activity
LI62_RS14570	COG3206	protein involved in exopolysaccharide biosynthesis
LI62_RS14585	COG1253	flavin adenine dinucleotide binding
LI62_RS14590	COG2982	Protein involved in outer membrane biogenesis
LI62_RS14595	COG0717	Belongs to the dCTP deaminase family
LI62_RS14605	COG5002	protein histidine kinase activity
LI62_RS14605	COG5001	Diguanylate cyclase
LI62_RS14605	COG3447	MASE1 domain protein
LI62_RS14610	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LI62_RS14615	COG0443	Heat shock 70 kDa protein
LI62_RS14620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS14625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS14630	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS14635	COG0477	Major facilitator Superfamily
LI62_RS14640	COG2205	protein histidine kinase activity
LI62_RS14645	COG0745	RESPONSE REGULATOR receiver
LI62_RS14650	COG0826	peptidase U32
LI62_RS14655	COG1597	lipid kinase activity
LI62_RS14660	COG4608	Belongs to the ABC transporter superfamily
LI62_RS14665	COG0444	Belongs to the ABC transporter superfamily
LI62_RS14670	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LI62_RS14675	COG0601	transmembrane transport
LI62_RS14680	COG0747	negative chemotaxis
LI62_RS14685	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS14690	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS14700	COG1070	Carbohydrate kinase
LI62_RS14725	COG1070	Carbohydrate kinase
LI62_RS14735	COG1830	Aldolase
LI62_RS14740	COG2211	Major facilitator Superfamily
LI62_RS14745	COG1397	ADP-ribosylglycohydrolase
LI62_RS14750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS14755	COG2188	Transcriptional regulator
LI62_RS14760	COG0351	phosphomethylpyrimidine kinase
LI62_RS14765	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LI62_RS14845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LI62_RS14850	COG0076	glutamate decarboxylase activity
LI62_RS14855	COG3206	protein involved in exopolysaccharide biosynthesis
LI62_RS14855	COG0489	protein tyrosine kinase activity
LI62_RS14860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LI62_RS14865	COG1596	polysaccharide export
LI62_RS14870	COG5455	response to cobalt ion
LI62_RS14880	COG0489	protein tyrosine kinase activity
LI62_RS14890	COG4807	Protein conserved in bacteria
LI62_RS14900	COG3275	phosphorelay sensor kinase activity
LI62_RS14905	COG0789	Transcriptional regulator
LI62_RS14910	COG1174	glycine betaine transport
LI62_RS14915	COG1125	glycine betaine transport
LI62_RS14920	COG1174	glycine betaine transport
LI62_RS14925	COG1732	Glycine betaine
LI62_RS14930	COG1472	Belongs to the glycosyl hydrolase 3 family
LI62_RS14935	COG0277	FAD linked oxidase domain protein
LI62_RS14945	COG1686	Belongs to the peptidase S11 family
LI62_RS14955	COG0586	Pfam SNARE associated Golgi protein
LI62_RS14960	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS14965	COG1538	Outer membrane efflux protein
LI62_RS14970	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LI62_RS14980	COG1346	cytolysis
LI62_RS14985	COG0295	cytidine deaminase activity
LI62_RS14990	COG2949	membrane
LI62_RS15000	COG1129	ABC transporter
LI62_RS15015	COG2311	Membrane
LI62_RS15025	COG0477	Major facilitator Superfamily
LI62_RS15030	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LI62_RS15035	COG4771	TonB-dependent receptor
LI62_RS15040	COG0833	amino acid
LI62_RS15045	COG0583	DNA-binding transcription factor activity
LI62_RS15050	COG2855	membrane
LI62_RS15055	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LI62_RS15060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS15060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LI62_RS15060	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LI62_RS15065	COG1105	Belongs to the carbohydrate kinase PfkB family
LI62_RS15070	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS15070	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS15085	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LI62_RS15090	COG1312	Catalyzes the dehydration of D-mannonate
LI62_RS15095	COG0246	Mannitol dehydrogenase
LI62_RS15100	COG0523	cobalamin synthesis protein
LI62_RS15105	COG0671	phosphoesterase, PA-phosphatase related
LI62_RS15110	COG0791	NLP P60 protein
LI62_RS15115	COG2200	EAL domain
LI62_RS15120	COG4166	transmembrane transport
LI62_RS15125	COG4174	ABC transporter (Permease)
LI62_RS15130	COG4239	(ABC) transporter, permease
LI62_RS15135	COG4172	Belongs to the ABC transporter superfamily
LI62_RS15145	COG2814	Major facilitator Superfamily
LI62_RS15150	COG1187	pseudouridine synthase activity
LI62_RS15155	COG1061	Type III restriction enzyme res subunit
LI62_RS15165	COG3081	Nucleoid-associated protein
LI62_RS15170	COG3082	Protein of unknown function (DUF1414)
LI62_RS15185	COG3182	Iron-regulated membrane protein
LI62_RS15195	COG0579	oxidoreductase
LI62_RS15200	COG0659	secondary active sulfate transmembrane transporter activity
LI62_RS15205	COG2239	Acts as a magnesium transporter
LI62_RS15210	COG4615	Cyclic peptide transporter
LI62_RS15220	COG2169	Transcriptional regulator
LI62_RS15220	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LI62_RS15230	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LI62_RS15235	COG2198	Histidine kinase
LI62_RS15235	COG0642	Histidine kinase
LI62_RS15255	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LI62_RS15270	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LI62_RS15275	COG0584	glycerophosphoryl diester phosphodiesterase
LI62_RS15280	COG2271	Major facilitator Superfamily
LI62_RS15285	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LI62_RS15290	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
LI62_RS15295	COG0247	lactate metabolic process
LI62_RS15340	COG1441	menaquinone biosynthetic process
LI62_RS15350	COG0596	Alpha beta hydrolase
LI62_RS15355	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LI62_RS15360	COG1169	isochorismate synthase
LI62_RS15365	COG4575	ribosome binding
LI62_RS15370	COG2153	protein acetylation
LI62_RS15375	COG1234	tRNA 3'-trailer cleavage
LI62_RS15380	COG0784	Response regulator, receiver
LI62_RS15380	COG0835	chemotaxis
LI62_RS15385	COG1007	ATP synthesis coupled electron transport
LI62_RS15390	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LI62_RS15395	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LI62_RS15400	COG0713	ATP synthesis coupled electron transport
LI62_RS15405	COG0839	Belongs to the complex I subunit 6 family
LI62_RS15415	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LI62_RS15445	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LI62_RS15450	COG0583	DNA-binding transcription factor activity
LI62_RS15455	COG0436	Aminotransferase
LI62_RS15465	COG0471	metal ion transport
LI62_RS15465	COG0490	domain, Protein
LI62_RS15470	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS15495	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LI62_RS15500	COG3959	Transketolase, thiamine diphosphate binding domain
LI62_RS15505	COG3037	sugar-specific permease SgaT UlaA
LI62_RS15515	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS15520	COG1609	Transcriptional regulator
LI62_RS15530	COG0622	Phosphoesterase
LI62_RS15535	COG0625	glutathione transferase activity
LI62_RS15540	COG0625	glutathione transferase activity
LI62_RS15545	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LI62_RS15550	COG1090	epimerase
LI62_RS15555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LI62_RS15560	COG4598	ABC transporter
LI62_RS15565	COG4160	amino acid transport
LI62_RS15575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS15585	COG0163	prenyltransferase activity
LI62_RS15590	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LI62_RS15595	COG1286	toxin biosynthetic process
LI62_RS15600	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LI62_RS15605	COG0285	dihydrofolate synthase activity
LI62_RS15615	COG0586	Pfam SNARE associated Golgi protein
LI62_RS15620	COG0101	tRNA pseudouridine synthase activity
LI62_RS15625	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LI62_RS15630	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LI62_RS15645	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LI62_RS15650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LI62_RS15650	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LI62_RS15660	COG3101	peptidyl-lysine hydroxylation
LI62_RS15665	COG0730	response to heat
LI62_RS15675	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LI62_RS15685	COG2840	Smr protein MutS2
LI62_RS15690	COG2062	phosphohistidine phosphatase, SixA
LI62_RS15695	COG1250	3-hydroxyacyl-CoA dehydrogenase
LI62_RS15695	COG1024	Enoyl-CoA hydratase
LI62_RS15705	COG3691	Protein conserved in bacteria
LI62_RS15710	COG2067	long-chain fatty acid transport protein
LI62_RS15720	COG2116	formate transmembrane transporter activity
LI62_RS15735	COG1560	Kdo2-lipid A biosynthetic process
LI62_RS15745	COG0436	Aminotransferase
LI62_RS15750	COG3275	phosphorelay sensor kinase activity
LI62_RS15755	COG3279	Response regulator of the LytR AlgR family
LI62_RS15760	COG0837	glucose binding
LI62_RS15770	COG3961	Belongs to the TPP enzyme family
LI62_RS15775	COG0667	Aldo Keto reductase
LI62_RS15785	COG1914	H( )-stimulated, divalent metal cation uptake system
LI62_RS15790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LI62_RS15795	COG2200	EAL domain
LI62_RS15795	COG2199	diguanylate cyclase activity
LI62_RS15810	COG3415	Transposase
LI62_RS15815	COG3415	Transposase
LI62_RS15820	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LI62_RS15850	COG0583	DNA-binding transcription factor activity
LI62_RS15855	COG0385	Bile acid
LI62_RS15860	COG3530	Putative quorum-sensing-regulated virulence factor
LI62_RS15865	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LI62_RS15870	COG3115	cell septum assembly
LI62_RS15885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS15910	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LI62_RS15915	COG4208	sulfate ABC transporter
LI62_RS15920	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LI62_RS15925	COG4150	thiosulfate binding
LI62_RS15930	COG2837	iron assimilation
LI62_RS15955	COG0408	coproporphyrinogen oxidase activity
LI62_RS15970	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LI62_RS15975	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LI62_RS15980	COG1609	Transcriptional regulator
LI62_RS15985	COG3250	beta-galactosidase activity
LI62_RS15990	COG2731	YhcH YjgK YiaL family protein
LI62_RS15995	COG0531	amino acid
LI62_RS16005	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LI62_RS16005	COG3408	Glycogen debranching enzyme
LI62_RS16010	COG5342	invasion associated locus B
LI62_RS16015	COG0494	nUDIX hydrolase
LI62_RS16020	COG0493	'glutamate synthase
LI62_RS16020	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LI62_RS16030	COG3850	Histidine kinase
LI62_RS16035	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS16040	COG1393	Belongs to the ArsC family
LI62_RS16045	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LI62_RS16055	COG0400	carboxylic ester hydrolase activity
LI62_RS16065	COG2321	neutral zinc metallopeptidase
LI62_RS16070	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LI62_RS16075	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LI62_RS16085	COG2716	regulation of RNA biosynthetic process
LI62_RS16090	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LI62_RS16095	COG0628	permease
LI62_RS16100	COG4783	chaperone-mediated protein folding
LI62_RS16105	COG1393	Belongs to the ArsC family
LI62_RS16120	COG1446	asparaginase
LI62_RS16125	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LI62_RS16135	COG2233	PERMEase
LI62_RS16140	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LI62_RS16145	COG2723	6-phospho-beta-galactosidase activity
LI62_RS16155	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LI62_RS16170	COG2200	EAL domain
LI62_RS16185	COG3713	MltA-interacting MipA family protein
LI62_RS16190	COG0745	RESPONSE REGULATOR receiver
LI62_RS16210	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS16225	COG3179	chitinase
LI62_RS16345	COG5484	DNA packaging
LI62_RS16345	COG3728	DNA packaging
LI62_RS16435	COG3723	Recombinational DNA repair protein, rece pathway
LI62_RS16470	COG0517	IMP dehydrogenase activity
LI62_RS16470	COG0516	GMP reductase activity
LI62_RS16475	COG1570	exodeoxyribonuclease VII activity
LI62_RS16490	COG1645	bacterial-type flagellum-dependent swarming motility
LI62_RS16505	COG1160	GTP binding
LI62_RS16515	COG2976	Protein conserved in bacteria
LI62_RS16520	COG0124	histidyl-tRNA synthetase
LI62_RS16535	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LI62_RS16555	COG0437	4 iron, 4 sulfur cluster binding
LI62_RS16560	COG0243	molybdopterin cofactor binding
LI62_RS16565	COG4953	penicillin-binding protein 1C
LI62_RS16570	COG2373	Large extracellular alpha-helical protein
LI62_RS16575	COG1263	PTS System
LI62_RS16575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS16575	COG2190	(PTS) system
LI62_RS16585	COG2897	thiosulfate sulfurtransferase activity
LI62_RS16590	COG1737	Transcriptional regulator
LI62_RS16600	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LI62_RS16605	COG2975	iron-sulfur cluster assembly
LI62_RS16610	COG0633	Ferredoxin
LI62_RS16615	COG0443	Heat shock 70 kDa protein
LI62_RS16620	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LI62_RS16625	COG0316	Belongs to the HesB IscA family
LI62_RS16630	COG0822	iron-sulfur transferase activity
LI62_RS16635	COG1104	cysteine desulfurase activity
LI62_RS16640	COG1959	2 iron, 2 sulfur cluster binding
LI62_RS16655	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LI62_RS16665	COG3711	transcriptional antiterminator
LI62_RS16670	COG2814	Major facilitator Superfamily
LI62_RS16675	COG2259	Doxx family
LI62_RS16690	COG1017	nitric oxide dioxygenase activity
LI62_RS16690	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LI62_RS16695	COG0347	Belongs to the P(II) protein family
LI62_RS16700	COG2204	response regulator
LI62_RS16705	COG3170	Tfp pilus assembly protein FimV
LI62_RS16710	COG2205	protein histidine kinase activity
LI62_RS16715	COG0047	phosphoribosylformylglycinamidine synthase activity
LI62_RS16715	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LI62_RS16720	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
LI62_RS16730	COG0560	Phosphoserine phosphatase
LI62_RS16735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS16735	COG1263	PTS System
LI62_RS16740	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LI62_RS16745	COG1737	Transcriptional regulator
LI62_RS16750	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LI62_RS16760	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LI62_RS16765	COG1381	Involved in DNA repair and RecF pathway recombination
LI62_RS16780	COG0681	Belongs to the peptidase S26 family
LI62_RS16790	COG3086	response to oxidative stress
LI62_RS16800	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
LI62_RS16810	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LI62_RS16815	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LI62_RS16820	COG0513	Belongs to the DEAD box helicase family
LI62_RS16825	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
LI62_RS16830	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LI62_RS16835	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LI62_RS16840	COG3118	belongs to the thioredoxin family
LI62_RS16845	COG3148	PFAM DTW domain containing protein
LI62_RS16855	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LI62_RS16860	COG5544	Lipoprotein
LI62_RS16865	COG0477	Major facilitator Superfamily
LI62_RS16895	COG0542	response to heat
LI62_RS16905	COG0564	pseudouridine synthase activity
LI62_RS16910	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS16915	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LI62_RS16920	COG0077	Prephenate dehydratase
LI62_RS16920	COG1605	Chorismate mutase
LI62_RS16930	COG0287	Prephenate dehydrogenase
LI62_RS16930	COG1605	Chorismate mutase
LI62_RS16935	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LI62_RS16950	COG2199	diguanylate cyclase activity
LI62_RS16955	COG2885	chlorophyll binding
LI62_RS16975	COG0336	Belongs to the RNA methyltransferase TrmD family
LI62_RS16980	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LI62_RS16990	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LI62_RS16995	COG4137	Cytochrome C assembly protein
LI62_RS17000	COG4536	flavin adenine dinucleotide binding
LI62_RS17005	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LI62_RS17015	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LI62_RS17020	COG0497	DNA recombination
LI62_RS17035	COG2867	negative regulation of translational initiation
LI62_RS17045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS17050	COG4209	transmembrane transport
LI62_RS17055	COG0395	ABC-type sugar transport system, permease component
LI62_RS17070	COG3842	ATPase activity
LI62_RS17075	COG0835	chemotaxis
LI62_RS17085	COG1360	Flagellar Motor Protein
LI62_RS17125	COG1705	Flagellar rod assembly protein muramidase FlgJ
LI62_RS17125	COG3951	Flagellar rod assembly protein muramidase FlgJ
LI62_RS17130	COG1706	bacterial-type flagellum-dependent cell motility
LI62_RS17140	COG4786	Flagellar basal body rod
LI62_RS17150	COG1749	Flagellar hook protein flgE
LI62_RS17165	COG1815	bacterial-type flagellum-dependent cell motility
LI62_RS17175	COG2747	anti-sigma28 factor FlgM
LI62_RS17180	COG3418	PFAM FlgN family protein
LI62_RS17220	COG1987	bacterial-type flagellum assembly
LI62_RS17230	COG3190	flagellar
LI62_RS17235	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LI62_RS17245	COG1580	Controls the rotational direction of flagella during chemotaxis
LI62_RS17250	COG3144	bacterial-type flagellum assembly
LI62_RS17275	COG1766	The M ring may be actively involved in energy transduction
LI62_RS17280	COG1677	Flagellar hook-basal body complex protein FliE
LI62_RS17285	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LI62_RS17295	COG0745	RESPONSE REGULATOR receiver
LI62_RS17305	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LI62_RS17310	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LI62_RS17325	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LI62_RS17345	COG2814	Major facilitator Superfamily
LI62_RS17350	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LI62_RS17355	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS17360	COG2226	methyltransferase
LI62_RS17360	COG1073	alpha beta
LI62_RS17390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS17395	COG3549	Plasmid maintenance system killer
LI62_RS17400	COG3093	addiction module antidote protein HigA
LI62_RS17405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LI62_RS17420	COG0402	S-adenosylhomocysteine deaminase activity
LI62_RS17425	COG0549	Belongs to the carbamate kinase family
LI62_RS17435	COG1304	FMN binding
LI62_RS17440	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LI62_RS17445	COG0666	response to abiotic stimulus
LI62_RS17450	COG0583	DNA-binding transcription factor activity
LI62_RS17455	COG0401	homolog of Blt101
LI62_RS17480	COG4575	ribosome binding
LI62_RS17490	COG1780	Probably involved in ribonucleotide reductase function
LI62_RS17495	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LI62_RS17505	COG4175	Glycine betaine
LI62_RS17510	COG4176	ABC-type proline glycine betaine transport system permease component
LI62_RS17520	COG2814	Major facilitator Superfamily
LI62_RS17525	COG1846	Transcriptional regulator
LI62_RS17530	COG1566	PFAM secretion protein HlyD family protein
LI62_RS17535	COG2814	Major facilitator Superfamily
LI62_RS17540	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LI62_RS17555	COG2918	glutathione biosynthetic process
LI62_RS17560	COG1238	metal cluster binding
LI62_RS17565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS17595	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LI62_RS17600	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LI62_RS17615	COG1546	Belongs to the CinA family
LI62_RS17625	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LI62_RS17635	COG2951	lytic endotransglycosylase activity
LI62_RS17640	COG3730	PTS system glucitol sorbitol-specific
LI62_RS17645	COG3732	PTS system glucitol sorbitol-specific
LI62_RS17655	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS17660	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS17665	COG1349	DNA-binding transcription factor activity
LI62_RS17675	COG3604	Transcriptional regulator
LI62_RS17680	COG1773	rubredoxin
LI62_RS17680	COG0426	domain, Protein
LI62_RS17685	COG0446	pyridine nucleotide-disulphide oxidoreductase
LI62_RS17690	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LI62_RS17695	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LI62_RS17700	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LI62_RS17705	COG1609	Transcriptional regulator
LI62_RS17710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS17710	COG1263	PTS System
LI62_RS17715	COG2723	6-phospho-beta-galactosidase activity
LI62_RS17720	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LI62_RS17730	COG3260	NADH ubiquinone oxidoreductase 20
LI62_RS17735	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LI62_RS17740	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
LI62_RS17740	COG3261	NADH dehydrogenase
LI62_RS17745	COG0650	Formate hydrogenlyase subunit 4
LI62_RS17750	COG0651	ATP synthesis coupled electron transport
LI62_RS17755	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LI62_RS17765	COG0375	protein maturation
LI62_RS17770	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LI62_RS17775	COG0298	carbon dioxide binding
LI62_RS17780	COG0409	Hydrogenase expression formation protein
LI62_RS17785	COG0309	Hydrogenase expression formation protein (HypE)
LI62_RS17805	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LI62_RS17815	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LI62_RS17820	COG0163	prenyltransferase activity
LI62_RS17835	COG0477	Major facilitator Superfamily
LI62_RS17850	COG1388	LysM domain
LI62_RS17850	COG4942	peptidase
LI62_RS17865	COG0585	pseudouridine synthase activity
LI62_RS17875	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LI62_RS17880	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LI62_RS17890	COG0529	Catalyzes the synthesis of activated sulfate
LI62_RS17910	COG2234	aminopeptidase activity
LI62_RS17925	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LI62_RS17930	COG0720	synthase
LI62_RS17940	COG1473	amidohydrolase
LI62_RS17950	COG0602	queuosine metabolic process
LI62_RS17955	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LI62_RS17960	COG1263	PTS System
LI62_RS17960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS17960	COG2190	(PTS) system
LI62_RS17965	COG1737	Transcriptional regulator
LI62_RS17980	COG3956	TIGRFAM MazG family protein
LI62_RS17985	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LI62_RS17990	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LI62_RS17995	COG4999	Histidine kinase
LI62_RS17995	COG3850	Histidine kinase
LI62_RS17995	COG3437	response regulator, receiver
LI62_RS17995	COG2205	protein histidine kinase activity
LI62_RS18000	COG1929	Belongs to the glycerate kinase type-1 family
LI62_RS18005	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS18010	COG4948	Mandelate Racemase Muconate Lactonizing
LI62_RS18015	COG2271	Major facilitator Superfamily
LI62_RS18020	COG0716	FMN binding
LI62_RS18025	COG0564	pseudouridine synthase activity
LI62_RS18030	COG3098	single-species biofilm formation
LI62_RS18050	COG1611	Belongs to the LOG family
LI62_RS18055	COG0814	amino acid
LI62_RS18060	COG1760	l-serine dehydratase
LI62_RS18070	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
LI62_RS18075	COG2363	Small membrane protein
LI62_RS18080	COG0583	DNA-binding transcription factor activity
LI62_RS18090	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LI62_RS18095	COG2166	iron-sulfur cluster assembly
LI62_RS18100	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LI62_RS18105	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LI62_RS18125	COG0860	N-Acetylmuramoyl-L-alanine amidase
LI62_RS18130	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LI62_RS18130	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LI62_RS18135	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LI62_RS18140	COG1074	ATP-dependent DNA helicase activity
LI62_RS18150	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LI62_RS18155	COG4967	type IV pilus modification protein PilV
LI62_RS18165	COG4795	General secretion pathway protein
LI62_RS18170	COG2165	general secretion pathway protein
LI62_RS18175	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LI62_RS18180	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LI62_RS18190	COG0494	nUDIX hydrolase
LI62_RS18195	COG3066	DNA modification
LI62_RS18205	COG0667	Aldo Keto reductase
LI62_RS18210	COG0477	Major facilitator Superfamily
LI62_RS18215	COG0204	Acyl-transferase
LI62_RS18215	COG0318	PFAM AMP-dependent synthetase and ligase
LI62_RS18220	COG1609	Transcriptional regulator
LI62_RS18230	COG2186	Transcriptional regulator
LI62_RS18235	COG2723	6-phospho-beta-galactosidase activity
LI62_RS18240	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LI62_RS18245	COG1609	Transcriptional regulator
LI62_RS18255	COG0583	DNA-binding transcription factor activity
LI62_RS18260	COG1794	racemase activity, acting on amino acids and derivatives
LI62_RS18270	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LI62_RS18275	COG1175	transmembrane transport
LI62_RS18280	COG0395	ABC-type sugar transport system, permease component
LI62_RS18285	COG3842	ATPase activity
LI62_RS18295	COG2814	Major facilitator Superfamily
LI62_RS18300	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS18305	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
LI62_RS18310	COG0823	Involved in the tonB-independent uptake of proteins
LI62_RS18315	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LI62_RS18320	COG0183	Belongs to the thiolase family
LI62_RS18335	COG0814	amino acid
LI62_RS18340	COG2388	GCN5-related N-acetyl-transferase
LI62_RS18345	COG3592	Divergent 4Fe-4S mono-cluster
LI62_RS18350	COG3729	General stress protein
LI62_RS18355	COG3685	Protein conserved in bacteria
LI62_RS18360	COG3685	Protein conserved in bacteria
LI62_RS18365	COG3546	catalase activity
LI62_RS18370	COG1271	oxidase subunit
LI62_RS18375	COG1294	oxidase, subunit
LI62_RS18390	COG1546	Belongs to the CinA family
LI62_RS18405	COG3111	PFAM Bacterial OB fold (BOF) protein
LI62_RS18410	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS18415	COG2015	COG2015, Alkyl sulfatase and related hydrolases
LI62_RS18435	COG2067	long-chain fatty acid transport protein
LI62_RS18440	COG1335	isochorismatase
LI62_RS18460	COG4942	peptidase
LI62_RS18465	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LI62_RS18470	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LI62_RS18485	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LI62_RS18495	COG4974	Belongs to the 'phage' integrase family
LI62_RS18510	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LI62_RS18515	COG0354	folic acid binding
LI62_RS18520	COG1272	protein, Hemolysin III
LI62_RS18525	COG1737	Transcriptional regulator
LI62_RS18530	COG2723	6-phospho-beta-galactosidase activity
LI62_RS18550	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LI62_RS18555	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS18560	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LI62_RS18560	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LI62_RS18570	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LI62_RS18575	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LI62_RS18580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LI62_RS18585	COG0006	proline dipeptidase activity
LI62_RS18595	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LI62_RS18600	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LI62_RS18605	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LI62_RS18610	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LI62_RS18615	COG0583	DNA-binding transcription factor activity
LI62_RS18620	COG2968	Membrane
LI62_RS18625	COG1279	arginine transmembrane transporter activity
LI62_RS18630	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LI62_RS18635	COG0668	transmembrane transport
LI62_RS18640	COG0191	fructose-bisphosphate aldolase activity
LI62_RS18645	COG0126	phosphoglycerate kinase activity
LI62_RS18650	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LI62_RS18655	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LI62_RS18660	COG0501	Belongs to the peptidase M48B family
LI62_RS18680	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
LI62_RS18685	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS18690	COG2267	carboxylic ester hydrolase activity
LI62_RS18715	COG1414	Transcriptional regulator
LI62_RS18720	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS18735	COG2146	nitrite reductase [NAD(P)H] activity
LI62_RS18745	COG0010	Belongs to the arginase family
LI62_RS18750	COG1166	arginine decarboxylase activity
LI62_RS18765	COG2814	Major facilitator Superfamily
LI62_RS18770	COG3091	SprT-like family
LI62_RS18775	COG2356	endonuclease I
LI62_RS18780	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LI62_RS18800	COG2805	Type II/IV secretion system protein
LI62_RS18805	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LI62_RS18810	COG0762	integral membrane protein
LI62_RS18815	COG1872	DUF167
LI62_RS18825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LI62_RS18830	COG2852	Protein conserved in bacteria
LI62_RS18840	COG3171	Protein conserved in bacteria
LI62_RS18850	COG1194	a g-specific adenine glycosylase
LI62_RS18860	COG0741	lytic transglycosylase activity
LI62_RS18865	COG2211	Major facilitator Superfamily
LI62_RS18870	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
LI62_RS18890	COG3052	prosthetic group binding
LI62_RS18900	COG0179	Fumarylacetoacetate (FAA) hydrolase
LI62_RS18905	COG3493	citrate carrier protein
LI62_RS18920	COG1982	Orn Lys Arg decarboxylase major
LI62_RS18925	COG1811	Na channel or pump
LI62_RS18935	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LI62_RS18945	COG0210	DNA helicase
LI62_RS18950	COG3344	reverse transcriptase
LI62_RS19015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LI62_RS19050	COG3039	Transposase
LI62_RS19070	COG3039	Transposase
LI62_RS19110	COG3039	Transposase
LI62_RS19115	COG0640	Transcriptional regulator
LI62_RS19120	COG1230	cation diffusion facilitator family transporter
LI62_RS19130	COG0789	Transcriptional regulator
LI62_RS19135	COG0789	Transcriptional regulator
LI62_RS19150	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LI62_RS19155	COG0243	molybdopterin cofactor binding
LI62_RS19160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS19175	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LI62_RS19355	COG0629	single-stranded DNA binding
LI62_RS19365	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LI62_RS19415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LI62_RS19415	COG2205	protein histidine kinase activity
LI62_RS19420	COG2197	response regulator
LI62_RS19440	COG0457	Tetratricopeptide repeat
LI62_RS19445	COG0726	polysaccharide deacetylase
LI62_RS19445	COG1649	PFAM Uncharacterised BCR, COG1649
LI62_RS19450	COG1215	transferase activity, transferring glycosyl groups
LI62_RS19460	COG0754	glutathionylspermidine amidase activity
LI62_RS19465	COG0625	glutathione transferase activity
LI62_RS19470	COG1349	DNA-binding transcription factor activity
LI62_RS19475	COG0840	transmembrane signaling receptor activity
LI62_RS19480	COG0667	Aldo Keto reductase
LI62_RS19485	COG2862	Uncharacterized protein family, UPF0114
LI62_RS19505	COG0848	biopolymer transport protein
LI62_RS19515	COG0626	cystathionine gamma-synthase activity
LI62_RS19520	COG0586	Pfam SNARE associated Golgi protein
LI62_RS19525	COG2207	Transcriptional regulator
LI62_RS19530	COG1979	alcohol dehydrogenase
LI62_RS19540	COG1032	radical SAM domain protein
LI62_RS19565	COG0604	alcohol dehydrogenase
LI62_RS19645	COG0697	spore germination
LI62_RS19650	COG1234	tRNA 3'-trailer cleavage
LI62_RS19660	COG1902	pentaerythritol trinitrate reductase activity
LI62_RS19665	COG0640	Transcriptional regulator
LI62_RS19675	COG2963	transposase activity
LI62_RS19705	COG1032	radical SAM domain protein
LI62_RS19725	COG3111	PFAM Bacterial OB fold (BOF) protein
LI62_RS19740	COG2249	NAD(P)H dehydrogenase (quinone) activity
LI62_RS19745	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LI62_RS19750	COG1652	LysM domain
LI62_RS19755	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
LI62_RS19760	COG2211	Major facilitator Superfamily
LI62_RS19785	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS19790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LI62_RS19795	COG1120	ATPase activity
LI62_RS19800	COG4774	siderophore transport
LI62_RS19805	COG0187	DNA topoisomerase II activity
LI62_RS19810	COG3150	esterase
LI62_RS19815	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LI62_RS19820	COG3151	Protein conserved in bacteria
LI62_RS19825	COG0494	nUDIX hydrolase
LI62_RS19840	COG0754	glutathionylspermidine amidase activity
LI62_RS19845	COG3384	dioxygenase
LI62_RS19855	COG3539	Fimbrial protein
LI62_RS19860	COG3188	usher protein
LI62_RS19865	COG3121	Chaperone
LI62_RS19870	COG3539	Fimbrial protein
LI62_RS19875	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LI62_RS19885	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LI62_RS19885	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LI62_RS19895	COG3025	triphosphatase activity
LI62_RS19900	COG4991	sh3 domain protein
LI62_RS19905	COG0617	tRNA 3'-terminal CCA addition
LI62_RS19915	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LI62_RS19925	COG0477	Major facilitator Superfamily
LI62_RS19930	COG0829	nickel cation binding
LI62_RS19935	COG0831	urea catabolic process
LI62_RS19940	COG0832	Belongs to the urease beta subunit family
LI62_RS19945	COG0804	urea catabolic process
LI62_RS19950	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LI62_RS19960	COG0830	nickel cation binding
LI62_RS19965	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LI62_RS19975	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LI62_RS19980	COG0358	DNA primase activity
LI62_RS19990	COG3663	DNA glycosylase
LI62_RS20005	COG2375	cellular response to nickel ion
LI62_RS20010	COG1695	Transcriptional regulator
LI62_RS20015	COG0840	transmembrane signaling receptor activity
LI62_RS20020	COG0840	transmembrane signaling receptor activity
LI62_RS20025	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LI62_RS20040	COG3121	Chaperone
LI62_RS20045	COG3188	usher protein
LI62_RS20055	COG3539	Fimbrial protein
LI62_RS20065	COG3121	Chaperone
LI62_RS20080	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LI62_RS20085	COG1830	Aldolase
LI62_RS20090	COG1879	ABC-type sugar transport system periplasmic component
LI62_RS20095	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS20100	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS20105	COG1129	ABC transporter
LI62_RS20110	COG2390	Transcriptional regulator
LI62_RS20115	COG1070	Carbohydrate kinase
LI62_RS20120	COG1902	pentaerythritol trinitrate reductase activity
LI62_RS20120	COG0446	pyridine nucleotide-disulphide oxidoreductase
LI62_RS20130	COG1451	nucleotide metabolic process
LI62_RS20135	COG0673	inositol 2-dehydrogenase activity
LI62_RS20140	COG0861	Integral membrane protein TerC family
LI62_RS20150	COG2721	sulfolactate sulfo-lyase activity
LI62_RS20160	COG2271	Major facilitator Superfamily
LI62_RS20165	COG2186	Transcriptional regulator
LI62_RS20170	COG0586	Pfam SNARE associated Golgi protein
LI62_RS20180	COG1422	Protein of unknown function (DUF1090)
LI62_RS20185	COG4575	ribosome binding
LI62_RS20190	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
LI62_RS20200	COG2259	Doxx family
LI62_RS20205	COG0435	Glutathione S-transferase
LI62_RS20210	COG3152	Membrane
LI62_RS20215	COG0583	DNA-binding transcription factor activity
LI62_RS20220	COG1741	Belongs to the pirin family
LI62_RS20230	COG0814	amino acid
LI62_RS20235	COG1882	Formate acetyltransferase
LI62_RS20240	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LI62_RS20245	COG0814	amino acid
LI62_RS20250	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LI62_RS20255	COG0583	DNA-binding transcription factor activity
LI62_RS20260	COG1929	Belongs to the glycerate kinase type-1 family
LI62_RS20265	COG2084	Dehydrogenase
LI62_RS20275	COG2721	sulfolactate sulfo-lyase activity
LI62_RS20280	COG1349	DNA-binding transcription factor activity
LI62_RS20290	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS20300	COG3716	PTS system mannose fructose sorbose family IID component
LI62_RS20310	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LI62_RS20315	COG2222	sugar isomerase
LI62_RS20320	COG0191	fructose-bisphosphate aldolase activity
LI62_RS20325	COG1263	PTS System
LI62_RS20325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LI62_RS20345	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LI62_RS20350	COG3107	peptidoglycan biosynthetic process
LI62_RS20355	COG0792	nuclease activity
LI62_RS20360	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
LI62_RS20365	COG2823	Periplasmic or secreted lipoprotein
LI62_RS20370	COG0701	Predicted permease
LI62_RS20375	COG0702	epimerase
LI62_RS20380	COG0693	protein deglycase activity
LI62_RS20385	COG3787	Belongs to the UPF0306 family
LI62_RS20390	COG2827	Endonuclease containing a URI domain
LI62_RS20395	COG3153	acetyltransferase
LI62_RS20400	COG3154	lipid carrier protein
LI62_RS20405	COG0826	peptidase U32
LI62_RS20410	COG0826	peptidase U32
LI62_RS20415	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LI62_RS20420	COG0814	amino acid
LI62_RS20425	COG0513	Belongs to the DEAD box helicase family
LI62_RS20440	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LI62_RS20445	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LI62_RS20450	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LI62_RS20455	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LI62_RS20475	COG0137	argininosuccinate synthase activity
LI62_RS20485	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LI62_RS20490	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LI62_RS20495	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LI62_RS20505	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LI62_RS20510	COG1534	Rna-binding protein
LI62_RS20520	COG2027	D-alanyl-D-alanine carboxypeptidase
LI62_RS20525	COG0745	RESPONSE REGULATOR receiver
LI62_RS20530	COG0642	Histidine kinase
LI62_RS20535	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LI62_RS20540	COG0697	spore germination
LI62_RS20550	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LI62_RS20555	COG0142	geranyltranstransferase activity
LI62_RS20560	COG3423	Transcriptional regulator
LI62_RS20565	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LI62_RS20570	COG5007	Belongs to the BolA IbaG family
LI62_RS20575	COG3113	response to antibiotic
LI62_RS20580	COG2854	intermembrane phospholipid transfer
LI62_RS20585	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LI62_RS20590	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LI62_RS20595	COG1127	ABC transporter
LI62_RS20600	COG0530	calcium, potassium:sodium antiporter activity
LI62_RS20610	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LI62_RS20615	COG3117	lipopolysaccharide transmembrane transporter activity
LI62_RS20620	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LI62_RS20625	COG1137	ATPase activity
LI62_RS20630	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LI62_RS20650	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS20660	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LI62_RS20665	COG5002	protein histidine kinase activity
LI62_RS20665	COG2198	Histidine kinase
LI62_RS20665	COG0784	Response regulator, receiver
LI62_RS20670	COG0795	lipopolysaccharide-transporting ATPase activity
LI62_RS20675	COG0795	lipopolysaccharide-transporting ATPase activity
LI62_RS20680	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LI62_RS20685	COG2927	DNA polymerase III (CHI subunit)
LI62_RS20695	COG0456	acetyltransferase
LI62_RS20700	COG1064	alcohol dehydrogenase
LI62_RS20710	COG0433	COG0433 Predicted ATPase
LI62_RS20715	COG1242	4 iron, 4 sulfur cluster binding
LI62_RS20720	COG0070	glutamate synthase
LI62_RS20720	COG0067	glutamate synthase
LI62_RS20720	COG0069	glutamate synthase activity
LI62_RS20725	COG0493	'glutamate synthase
LI62_RS20730	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LI62_RS20735	COG0402	S-adenosylhomocysteine deaminase activity
LI62_RS20740	COG2731	YhcH YjgK YiaL family protein
LI62_RS20755	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LI62_RS20760	COG2186	Transcriptional regulator
LI62_RS20765	COG2969	positive regulation of protein catabolic process
LI62_RS20770	COG0625	glutathione transferase activity
LI62_RS20775	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LI62_RS20785	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LI62_RS20790	COG3105	Protein conserved in bacteria
LI62_RS20795	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LI62_RS20800	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LI62_RS20810	COG1438	arginine binding
LI62_RS20820	COG2732	(Barnase) inhibitor
LI62_RS20825	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS20830	COG1289	transmembrane transporter activity
LI62_RS20845	COG0583	DNA-binding transcription factor activity
LI62_RS20850	COG0312	modulator of DNA gyrase
LI62_RS20855	COG3164	Protein of unknown function
LI62_RS20870	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LI62_RS20875	COG1792	Involved in formation and maintenance of cell shape
LI62_RS20880	COG1077	Cell shape determining protein MreB Mrl
LI62_RS20885	COG2199	diguanylate cyclase activity
LI62_RS20885	COG2200	EAL domain
LI62_RS20890	COG0604	alcohol dehydrogenase
LI62_RS20900	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LI62_RS20905	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LI62_RS20910	COG0511	ligase activity, forming carbon-carbon bonds
LI62_RS20915	COG0439	Biotin carboxylase
LI62_RS20920	COG3924	membrane
LI62_RS20925	COG4145	pantothenate transmembrane transporter activity
LI62_RS20930	COG2264	protein methyltransferase activity
LI62_RS20960	COG1309	transcriptional regulator
LI62_RS20965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS20970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LI62_RS21010	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LI62_RS21020	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LI62_RS21025	COG0009	L-threonylcarbamoyladenylate synthase
LI62_RS21030	COG0551	DNA topoisomerase type I activity
LI62_RS21035	COG2922	Belongs to the Smg family
LI62_RS21040	COG0758	DNA mediated transformation
LI62_RS21045	COG0242	peptide deformylase activity
LI62_RS21050	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LI62_RS21055	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LI62_RS21055	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LI62_RS21065	COG1970	mechanosensitive ion channel activity
LI62_RS21070	COG3036	rescue of stalled ribosome
LI62_RS21075	COG0789	Transcriptional regulator
LI62_RS21090	COG0202	RNA polymerase activity
LI62_RS21100	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LI62_RS21115	COG0201	protein transport
LI62_RS21125	COG1841	ribosomal large subunit assembly
LI62_RS21140	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LI62_RS21145	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LI62_RS21175	COG0255	Belongs to the universal ribosomal protein uL29 family
LI62_RS21180	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LI62_RS21220	COG0051	transcription antitermination factor activity, RNA binding
LI62_RS21260	COG2168	tRNA wobble position uridine thiolation
LI62_RS21265	COG2923	Belongs to the DsrF TusC family
LI62_RS21270	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LI62_RS21275	COG2964	Protein conserved in bacteria
LI62_RS21280	COG0545	Peptidyl-prolyl cis-trans isomerase
LI62_RS21290	COG1047	Peptidyl-prolyl cis-trans
LI62_RS21295	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LI62_RS21300	COG0475	glutathione-regulated potassium exporter activity
LI62_RS21300	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LI62_RS21305	COG2249	NAD(P)H dehydrogenase (quinone) activity
LI62_RS21310	COG0488	(ABC) transporter
LI62_RS21320	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LI62_RS21330	COG0679	Auxin Efflux Carrier
LI62_RS21365	COG0429	hydrolase of the alpha beta-hydrolase fold
LI62_RS21370	COG3089	Belongs to the UPF0270 family
LI62_RS21375	COG3954	Phosphoribulokinase
LI62_RS21380	COG1765	OsmC-like protein
LI62_RS21390	COG1289	transmembrane transporter activity
LI62_RS21395	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LI62_RS21405	COG2184	nucleotidyltransferase activity
LI62_RS21415	COG0738	Major facilitator superfamily
LI62_RS21420	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LI62_RS21430	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LI62_RS21430	COG1648	precorrin-2 dehydrogenase activity
LI62_RS21440	COG0180	Tryptophanyl-tRNA synthetase
LI62_RS21450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LI62_RS21455	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LI62_RS21460	COG3266	domain, Protein
LI62_RS21465	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LI62_RS21470	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LI62_RS21480	COG4796	Type ii and iii secretion system protein
LI62_RS21500	COG4972	Pilus assembly protein
LI62_RS21505	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LI62_RS21510	COG0494	nUDIX hydrolase
LI62_RS21525	COG1011	Hydrolase
LI62_RS21530	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LI62_RS21535	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LI62_RS21540	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
LI62_RS21545	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LI62_RS21560	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LI62_RS21565	COG2183	response to ionizing radiation
LI62_RS21570	COG1918	ferrous iron import across plasma membrane
LI62_RS21590	COG1040	competence protein
LI62_RS21600	COG2610	gluconate transmembrane transporter activity
LI62_RS21605	COG1640	4-alpha-glucanotransferase
LI62_RS21610	COG0058	SHG alpha-glucan phosphorylase activity
LI62_RS21615	COG2909	trisaccharide binding
LI62_RS21620	COG1349	DNA-binding transcription factor activity
LI62_RS21625	COG0705	Rhomboid family
LI62_RS21630	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LI62_RS21640	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LI62_RS21645	COG0058	SHG alpha-glucan phosphorylase activity
LI62_RS21650	COG0297	glycogen (starch) synthase activity
LI62_RS21655	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LI62_RS21660	COG1523	belongs to the glycosyl hydrolase 13 family
LI62_RS21665	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LI62_RS21670	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LI62_RS21680	COG2095	MarC family integral membrane protein
LI62_RS21685	COG2610	gluconate transmembrane transporter activity
LI62_RS21690	COG3265	gluconokinase activity
LI62_RS21695	COG1609	Transcriptional regulator
LI62_RS21700	COG1741	Belongs to the pirin family
LI62_RS21705	COG0673	inositol 2-dehydrogenase activity
LI62_RS21710	COG1247	-acetyltransferase
LI62_RS21715	COG0405	Gamma-glutamyltransferase
LI62_RS21725	COG0584	glycerophosphoryl diester phosphodiesterase
LI62_RS21755	COG0411	ABC transporter
LI62_RS21760	COG4177	L-phenylalanine transmembrane transporter activity
LI62_RS21770	COG0683	leucine binding
LI62_RS21785	COG0456	acetyltransferase
LI62_RS21790	COG0683	leucine binding
LI62_RS21795	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LI62_RS21800	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LI62_RS21805	COG2177	Part of the ABC transporter FtsEX involved in
LI62_RS21810	COG2884	Cell division ATP-binding protein ftsE
LI62_RS21815	COG0552	protein localization to endoplasmic reticulum
LI62_RS21820	COG0742	ribosomal rna small subunit methyltransferase
LI62_RS21825	COG3776	membrane
LI62_RS21835	COG3714	YhhN family
LI62_RS21855	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LI62_RS21860	COG0425	Belongs to the sulfur carrier protein TusA family
LI62_RS21865	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LI62_RS21875	COG0628	permease
LI62_RS21895	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LI62_RS21915	COG1216	Glycosyl transferase, family 2
LI62_RS21940	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LI62_RS21950	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS21955	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LI62_RS22000	COG3479	Phenolic acid decarboxylase
LI62_RS22005	COG0583	DNA-binding transcription factor activity
LI62_RS22010	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS22035	COG2205	protein histidine kinase activity
LI62_RS22040	COG0745	RESPONSE REGULATOR receiver
LI62_RS22045	COG1276	copper resistance
LI62_RS22050	COG2372	response to copper ion
LI62_RS22055	COG3667	copper resistance
LI62_RS22060	COG2132	Multicopper oxidase
LI62_RS22070	COG0739	heme binding
LI62_RS22100	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LI62_RS22175	COG2081	HI0933 family
LI62_RS22180	COG0306	phosphate transporter
LI62_RS22190	COG0589	response to stress
LI62_RS22195	COG0742	ribosomal rna small subunit methyltransferase
LI62_RS22200	COG0339	signal peptide processing
LI62_RS22205	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LI62_RS22210	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LI62_RS22230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LI62_RS22240	COG2197	response regulator
LI62_RS22245	COG1028	Short-chain dehydrogenase reductase Sdr
LI62_RS22250	COG0583	DNA-binding transcription factor activity
LI62_RS22255	COG1295	ribonuclease BN
LI62_RS22260	COG0477	Major facilitator Superfamily
LI62_RS22265	COG2982	Protein involved in outer membrane biogenesis
LI62_RS22270	COG2200	EAL domain
LI62_RS22280	COG0612	Peptidase, M16
LI62_RS22285	COG1301	dicarboxylic acid transport
LI62_RS22290	COG2200	EAL domain
LI62_RS22290	COG2199	diguanylate cyclase activity
LI62_RS22295	COG3118	belongs to the thioredoxin family
LI62_RS22295	COG0457	Tetratricopeptide repeat
LI62_RS22300	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LI62_RS22305	COG1215	transferase activity, transferring glycosyl groups
LI62_RS22335	COG2194	sulfuric ester hydrolase activity
LI62_RS22345	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LI62_RS22375	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LI62_RS22385	COG1739	Uncharacterized protein family UPF0029
LI62_RS22390	COG0006	proline dipeptidase activity
LI62_RS22395	COG1024	Enoyl-CoA hydratase
LI62_RS22395	COG1250	3-hydroxyacyl-CoA dehydrogenase
LI62_RS22400	COG0183	Belongs to the thiolase family
LI62_RS22405	COG0751	glycine-tRNA ligase activity
LI62_RS22410	COG0752	glycyl-tRNA synthetase alpha subunit
LI62_RS22420	COG3274	enterobacterial common antigen metabolic process
LI62_RS22425	COG1070	Carbohydrate kinase
LI62_RS22430	COG2115	Belongs to the xylose isomerase family
LI62_RS22435	COG4213	ABC transporter substrate-binding protein
LI62_RS22445	COG4214	carbohydrate transport
LI62_RS22450	COG1609	Transcriptional regulator
LI62_RS22450	COG2207	Transcriptional regulator
LI62_RS22455	COG2992	FlgJ-related protein
LI62_RS22460	COG0366	Alpha amylase catalytic
LI62_RS22465	COG3977	Valine--pyruvate aminotransferase
LI62_RS22470	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LI62_RS22475	COG1414	Transcriptional regulator
LI62_RS22485	COG2731	YhcH YjgK YiaL family protein
LI62_RS22495	COG2271	Major facilitator Superfamily
LI62_RS22500	COG1070	Carbohydrate kinase
LI62_RS22505	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LI62_RS22510	COG3623	hexulose-6-phosphate isomerase
LI62_RS22515	COG0235	Class ii aldolase
LI62_RS22525	COG2211	Major facilitator Superfamily
LI62_RS22540	COG1012	belongs to the aldehyde dehydrogenase family
LI62_RS22545	COG1940	carbohydrate kinase activity
LI62_RS22550	COG3276	selenocysteine insertion sequence binding
LI62_RS22560	COG0625	glutathione transferase activity
LI62_RS22565	COG2213	PTS system mannitol-specific
LI62_RS22565	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LI62_RS22575	COG3722	fumarate hydratase activity
LI62_RS22595	COG3121	Chaperone
LI62_RS22600	COG3539	Fimbrial protein
LI62_RS22610	COG2186	Transcriptional regulator
LI62_RS22615	COG1304	FMN binding
LI62_RS22620	COG2271	Major facilitator Superfamily
LI62_RS22625	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LI62_RS22635	COG0583	DNA-binding transcription factor activity
LI62_RS22640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LI62_RS22650	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LI62_RS22655	COG3978	acetolactate synthase activity
LI62_RS22670	COG3085	chromosome segregation
LI62_RS22720	COG4206	TonB-dependent receptor
LI62_RS22725	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LI62_RS22745	COG0583	DNA-binding transcription factor activity
LI62_RS22750	COG0165	Argininosuccinate lyase
LI62_RS22760	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LI62_RS22765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LI62_RS22770	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LI62_RS22780	COG0371	Dehydrogenase
LI62_RS22785	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
LI62_RS22795	COG0460	homoserine dehydrogenase
LI62_RS22795	COG0527	aspartate kinase activity
LI62_RS22800	COG0626	cystathionine gamma-synthase activity
LI62_RS22810	COG0254	rRNA binding
LI62_RS22815	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LI62_RS22820	COG1609	Transcriptional regulator
LI62_RS22825	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LI62_RS22840	COG1575	Belongs to the MenA family. Type 1 subfamily
LI62_RS22855	COG3074	FtsZ-dependent cytokinesis
LI62_RS22860	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LI62_RS22870	COG1494	fructose-1,6-bisphosphatase
LI62_RS22880	COG3152	Membrane
LI62_RS22890	COG0149	triose-phosphate isomerase activity
LI62_RS22900	COG2134	cdp-diacylglycerol pyrophosphatase
LI62_RS22910	COG0205	6-phosphofructokinase activity
LI62_RS22930	COG4695	Portal protein
LI62_RS22940	COG0464	growth
LI62_RS22950	COG3678	ATP-independent chaperone mediated protein folding
LI62_RS22955	COG0745	RESPONSE REGULATOR receiver
LI62_RS22960	COG2205	protein histidine kinase activity
LI62_RS22965	COG2258	MOSC domain
LI62_RS22970	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LI62_RS22980	COG4977	sequence-specific DNA binding
LI62_RS22980	COG1917	Cupin 2, conserved barrel domain protein
LI62_RS22985	COG4977	sequence-specific DNA binding
LI62_RS22995	COG1070	Carbohydrate kinase
LI62_RS23000	COG4806	L-rhamnose isomerase
LI62_RS23005	COG0235	Class ii aldolase
LI62_RS23015	COG1129	ABC transporter
LI62_RS23020	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS23030	COG1454	alcohol dehydrogenase
LI62_RS23040	COG2211	Major facilitator Superfamily
LI62_RS23060	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LI62_RS23075	COG3188	usher protein
LI62_RS23080	COG3121	Chaperone
LI62_RS23100	COG0243	molybdopterin cofactor binding
LI62_RS23100	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS23105	COG3383	formate dehydrogenase (NAD+) activity
LI62_RS23105	COG0243	molybdopterin cofactor binding
LI62_RS23110	COG0437	4 iron, 4 sulfur cluster binding
LI62_RS23115	COG2864	formate dehydrogenase
LI62_RS23120	COG3058	Necessary for formate dehydrogenase activity
LI62_RS23130	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LI62_RS23140	COG0456	acetyltransferase
LI62_RS23155	COG1011	Hydrolase
LI62_RS23160	COG1349	DNA-binding transcription factor activity
LI62_RS23165	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS23175	COG3684	Belongs to the aldolase LacD family
LI62_RS23185	COG1501	Belongs to the glycosyl hydrolase 31 family
LI62_RS23200	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LI62_RS23215	COG3852	Histidine kinase
LI62_RS23230	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LI62_RS23235	COG3078	GTPase activator activity
LI62_RS23250	COG0204	Acyl-transferase
LI62_RS23260	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LI62_RS23265	COG3084	Protein conserved in bacteria
LI62_RS23270	COG0746	molybdenum cofactor guanylyltransferase activity
LI62_RS23275	COG1763	Mo-molybdopterin cofactor biosynthetic process
LI62_RS23300	COG2186	Transcriptional regulator
LI62_RS23305	COG0477	Major facilitator Superfamily
LI62_RS23310	COG1609	Transcriptional regulator
LI62_RS23315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LI62_RS23325	COG1172	Belongs to the binding-protein-dependent transport system permease family
LI62_RS23330	COG1129	ABC transporter
LI62_RS23335	COG1869	D-ribose catabolic process
LI62_RS23340	COG3158	transport of potassium into the cell
LI62_RS23350	COG2425	protein containing a von Willebrand factor type A (vWA) domain
LI62_RS23355	COG2502	aspartate--ammonia ligase
LI62_RS23360	COG1522	sequence-specific DNA binding
LI62_RS23365	COG0716	FMN binding
LI62_RS23370	COG0445	tRNA wobble uridine modification
LI62_RS23375	COG0357	Ribosomal RNA small subunit methyltransferase G
LI62_RS23380	COG3312	ion transport
LI62_RS23385	COG0356	it plays a direct role in the translocation of protons across the membrane
LI62_RS23395	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LI62_RS23400	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LI62_RS23415	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LI62_RS23420	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LI62_RS23425	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LI62_RS23435	COG3539	Fimbrial protein
LI62_RS23440	COG3121	Chaperone
LI62_RS23450	COG3539	Fimbrial protein
LI62_RS23455	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LI62_RS23460	COG0573	inorganic phosphate transmembrane transporter activity
LI62_RS23465	COG0581	inorganic phosphate transmembrane transporter activity
LI62_RS23470	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LI62_RS23475	COG0704	Plays a role in the regulation of phosphate uptake
LI62_RS23480	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LI62_RS23485	COG2252	PERMEase
LI62_RS23490	COG0431	NADPH-dependent FMN reductase
LI62_RS23495	COG2091	lysine biosynthetic process via aminoadipic acid
LI62_RS23515	COG0706	membrane insertase activity
LI62_RS23785	COG0596	Alpha beta hydrolase
LI62_RS24200	COG0431	NADPH-dependent FMN reductase
LI62_RS24235	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LI62_RS24370	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LI62_RS24430	COG2003	Belongs to the UPF0758 family
LI62_RS24525	COG0859	PFAM glycosyl transferase family 9
LI62_RS24645	COG2244	polysaccharide biosynthetic process
LI62_RS24785	COG3165	ubiquinone biosynthetic process from chorismate