LI62_RS00100 PF02378 Phosphotransferase system, EIIC LI62_RS00140 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS00270 PF00204 DNA gyrase B LI62_RS00275 PF00308 Bacterial dnaA protein LI62_RS00275 PF08299 Bacterial dnaA protein helix-turn-helix LI62_RS00275 PF11638 DnaA N-terminal domain LI62_RS00280 PF00712 DNA polymerase III beta subunit, N-terminal domain LI62_RS00280 PF02767 DNA polymerase III beta subunit, central domain LI62_RS00280 PF02768 DNA polymerase III beta subunit, C-terminal domain LI62_RS00285 PF02463 RecF/RecN/SMC N terminal domain LI62_RS00290 PF00204 DNA gyrase B LI62_RS00290 PF00986 DNA gyrase B subunit, carboxyl terminus LI62_RS00290 PF01751 Toprim domain LI62_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS00295 PF03466 LysR substrate binding domain LI62_RS00300 PF00107 Zinc-binding dehydrogenase LI62_RS00300 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS00305 PF08282 haloacid dehalogenase-like hydrolase LI62_RS00310 PF00392 Bacterial regulatory proteins, gntR family LI62_RS00310 PF07729 FCD domain LI62_RS00315 PF05035 2-keto-3-deoxy-galactonokinase LI62_RS00320 PF01081 KDPG and KHG aldolase LI62_RS00325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI62_RS00325 PF13378 Enolase C-terminal domain-like LI62_RS00330 PF07690 Major Facilitator Superfamily LI62_RS00335 PF07676 WD40-like Beta Propeller Repeat LI62_RS00335 PF12566 LI62_RS00335 LI62_RS00340 PF07119 LI62_RS00340 LI62_RS00345 PF00011 Hsp20/alpha crystallin family LI62_RS00350 PF00011 Hsp20/alpha crystallin family LI62_RS00355 PF02080 TrkA-C domain LI62_RS00355 PF06826 LI62_RS00355 LI62_RS00360 PF00392 Bacterial regulatory proteins, gntR family LI62_RS00360 PF07702 UTRA domain LI62_RS00365 PF00367 phosphotransferase system, EIIB LI62_RS00365 PF02378 Phosphotransferase system, EIIC LI62_RS00370 PF02056 Family 4 glycosyl hydrolase LI62_RS00370 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI62_RS00375 PF02656 LI62_RS00375 LI62_RS00380 PF02656 LI62_RS00380 LI62_RS00385 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS00390 PF02447 LI62_RS00390 LI62_RS00395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS00395 PF03466 LysR substrate binding domain LI62_RS00400 PF07690 Major Facilitator Superfamily LI62_RS00405 PF00892 EamA-like transporter family LI62_RS00410 PF13673 Acetyltransferase (GNAT) domain LI62_RS00420 PF09907 LI62_RS00420 LI62_RS00425 PF01381 Helix-turn-helix LI62_RS00430 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS00430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS00430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS00435 PF13710 ACT domain LI62_RS00440 PF00072 Response regulator receiver domain LI62_RS00440 PF00196 Bacterial regulatory proteins, luxR family LI62_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS00445 PF05231 LI62_RS00445 LI62_RS00445 PF07730 Histidine kinase LI62_RS00450 PF07690 Major Facilitator Superfamily LI62_RS00455 PF07690 Major Facilitator Superfamily LI62_RS00460 PF00561 alpha/beta hydrolase fold LI62_RS00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS00465 PF03466 LysR substrate binding domain LI62_RS00470 PF06711 LI62_RS00470 LI62_RS00480 PF00665 Integrase core domain LI62_RS00480 PF13565 LI62_RS00480 LI62_RS00485 PF07690 Major Facilitator Superfamily LI62_RS00490 PF00892 EamA-like transporter family LI62_RS00495 PF02264 LamB porin LI62_RS00500 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI62_RS00505 PF00232 Glycosyl hydrolase family 1 LI62_RS00510 PF02378 Phosphotransferase system, EIIC LI62_RS00515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS00520 PF00356 Bacterial regulatory proteins, lacI family LI62_RS00520 PF13377 Periplasmic binding protein-like domain LI62_RS00530 PF07690 Major Facilitator Superfamily LI62_RS00535 PF02321 Outer membrane efflux protein LI62_RS00540 PF00873 AcrB/AcrD/AcrF family LI62_RS00545 PF00529 HlyD family secretion protein LI62_RS00545 PF16576 LI62_RS00545 LI62_RS00550 PF00440 Bacterial regulatory proteins, tetR family LI62_RS00555 PF00583 Acetyltransferase (GNAT) family LI62_RS00560 PF00440 Bacterial regulatory proteins, tetR family LI62_RS00560 PF08362 YcdC-like protein, C-terminal region LI62_RS00565 PF07690 Major Facilitator Superfamily LI62_RS00570 PF03180 NLPA lipoprotein LI62_RS00575 PF00563 EAL domain LI62_RS00580 PF00196 Bacterial regulatory proteins, luxR family LI62_RS00585 PF00196 Bacterial regulatory proteins, luxR family LI62_RS00590 PF00419 Fimbrial protein LI62_RS00595 PF00577 Outer membrane usher protein LI62_RS00595 PF13953 PapC C-terminal domain LI62_RS00595 PF13954 PapC N-terminal domain LI62_RS00600 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS00600 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS00605 PF00419 Fimbrial protein LI62_RS00610 PF00486 Transcriptional regulatory protein, C terminal LI62_RS00615 PF15941 LI62_RS00615 LI62_RS00620 PF16449 LI62_RS00620 LI62_RS00630 PF15976 LI62_RS00630 LI62_RS00630 PF16967 LI62_RS00630 LI62_RS00655 PF00005 ABC transporter LI62_RS00655 PF00664 ABC transporter transmembrane region LI62_RS00655 PF03412 Peptidase C39 family LI62_RS00665 PF13437 HlyD family secretion protein LI62_RS00670 PF13483 Beta-lactamase superfamily domain LI62_RS00675 PF01965 DJ-1/PfpI family LI62_RS00675 PF12833 Helix-turn-helix domain LI62_RS00680 PF13175 AAA ATPase domain LI62_RS00680 PF13304 AAA domain LI62_RS00685 PF04463 LI62_RS00685 LI62_RS00685 PF08349 LI62_RS00685 LI62_RS00690 PF00576 HIUase/Transthyretin family LI62_RS00695 PF13411 MerR HTH family regulatory protein LI62_RS00700 PF08212 Lipocalin-like domain LI62_RS00705 PF00419 Fimbrial protein LI62_RS00710 PF00419 Fimbrial protein LI62_RS00715 PF00577 Outer membrane usher protein LI62_RS00715 PF13953 PapC C-terminal domain LI62_RS00715 PF13954 PapC N-terminal domain LI62_RS00720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS00720 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS00725 PF00419 Fimbrial protein LI62_RS00730 PF00196 Bacterial regulatory proteins, luxR family LI62_RS00735 PF00486 Transcriptional regulatory protein, C terminal LI62_RS00745 PF01965 DJ-1/PfpI family LI62_RS00745 PF12833 Helix-turn-helix domain LI62_RS00750 PF13673 Acetyltransferase (GNAT) domain LI62_RS00755 PF13310 LI62_RS00755 LI62_RS00760 PF08845 LI62_RS00760 LI62_RS00765 PF13132 LI62_RS00765 LI62_RS00780 PF06755 LI62_RS00780 LI62_RS00785 PF06154 YagB/YeeU/YfjZ family LI62_RS00790 PF06174 LI62_RS00790 LI62_RS00795 PF04002 RadC-like JAB domain LI62_RS00800 PF06067 LI62_RS00800 LI62_RS00820 PF05930 Prophage CP4-57 regulatory protein (AlpA) LI62_RS00825 PF11726 LI62_RS00825 LI62_RS00830 PF00916 LI62_RS00830 LI62_RS00830 PF01740 STAS domain LI62_RS00835 PF00582 Universal stress protein family LI62_RS00840 PF07690 Major Facilitator Superfamily LI62_RS00845 PF12840 Helix-turn-helix domain LI62_RS00850 PF03358 NADPH-dependent FMN reductase LI62_RS00855 PF04542 Sigma-70 region 2 LI62_RS00855 PF08281 Sigma-70, region 4 LI62_RS00860 PF06953 Arsenical resistance operon trans-acting repressor ArsD LI62_RS00865 PF02374 Anion-transporting ATPase LI62_RS00870 PF13420 Acetyltransferase (GNAT) domain LI62_RS00875 PF03960 ArsC family LI62_RS00880 PF02040 LI62_RS00880 LI62_RS00885 PF02374 Anion-transporting ATPase LI62_RS00890 PF06953 Arsenical resistance operon trans-acting repressor ArsD LI62_RS00895 PF01022 Bacterial regulatory protein, arsR family LI62_RS00900 PF13175 AAA ATPase domain LI62_RS00905 PF00580 UvrD/REP helicase N-terminal domain LI62_RS00905 PF13361 UvrD-like helicase C-terminal domain LI62_RS00910 PF00589 Phage integrase family LI62_RS00910 PF13356 Domain of unknown function (DUF4102) LI62_RS00920 PF13347 MFS/sugar transport protein LI62_RS00925 PF01055 Glycosyl hydrolases family 31 LI62_RS00925 PF13802 Galactose mutarotase-like LI62_RS00930 PF05170 LI62_RS00930 LI62_RS00935 PF00860 Permease family LI62_RS00940 PF03616 LI62_RS00940 LI62_RS00945 PF00270 DEAD/DEAH box helicase LI62_RS00945 PF00271 Helicase conserved C-terminal domain LI62_RS00945 PF17191 LI62_RS00945 LI62_RS00950 PF00588 SpoU rRNA Methylase family LI62_RS00950 PF12105 SpoU, rRNA methylase, C-terminal LI62_RS00955 PF02824 TGS domain LI62_RS00955 PF04607 Region found in RelA / SpoT proteins LI62_RS00955 PF13291 ACT domain LI62_RS00955 PF13328 HD domain LI62_RS00960 PF01192 RNA polymerase Rpb6 LI62_RS00965 PF00625 Guanylate kinase LI62_RS00970 PF01653 NAD-dependent DNA ligase adenylation domain LI62_RS00970 PF03120 NAD-dependent DNA ligase OB-fold domain LI62_RS00980 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB LI62_RS00985 PF06251 Capsule biosynthesis GfcC LI62_RS00990 PF06082 LI62_RS00990 LI62_RS00995 PF02563 Polysaccharide biosynthesis/export protein LI62_RS00995 PF10531 SLBB domain LI62_RS01000 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI62_RS01005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI62_RS01005 PF02706 Chain length determinant protein LI62_RS01005 PF13807 LI62_RS01005 LI62_RS01010 PF03458 LI62_RS01010 LI62_RS01015 PF03755 LI62_RS01015 LI62_RS01015 PF08340 LI62_RS01015 LI62_RS01020 PF01138 3' exoribonuclease family, domain 1 LI62_RS01020 PF03725 3' exoribonuclease family, domain 2 LI62_RS01025 PF00156 Phosphoribosyl transferase domain LI62_RS01030 PF00440 Bacterial regulatory proteins, tetR family LI62_RS01035 PF00692 dUTPase LI62_RS01040 PF02441 Flavoprotein LI62_RS01040 PF04127 DNA / pantothenate metabolism flavoprotein LI62_RS01045 PF04002 RadC-like JAB domain LI62_RS01050 PF00830 Ribosomal L28 family LI62_RS01055 PF00471 Ribosomal protein L33 LI62_RS01060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI62_RS01060 PF06827 Zinc finger found in FPG and IleRS LI62_RS01060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI62_RS01065 PF01467 Cytidylyltransferase LI62_RS01070 PF00535 Glycosyl transferase family 2 LI62_RS01075 PF00534 Glycosyl transferases group 1 LI62_RS01075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LI62_RS01080 PF00535 Glycosyl transferase family 2 LI62_RS01085 PF00534 Glycosyl transferases group 1 LI62_RS01085 PF13439 Glycosyltransferase Family 4 LI62_RS01090 PF00534 Glycosyl transferases group 1 LI62_RS01090 PF13439 Glycosyltransferase Family 4 LI62_RS01095 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI62_RS01105 PF04932 LI62_RS01105 LI62_RS01110 PF00535 Glycosyl transferase family 2 LI62_RS01115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI62_RS01120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI62_RS01125 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI62_RS01130 PF01370 NAD dependent epimerase/dehydratase family LI62_RS01135 PF00155 Aminotransferase class I and II LI62_RS01140 PF00107 Zinc-binding dehydrogenase LI62_RS01140 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS01150 PF00534 Glycosyl transferases group 1 LI62_RS01155 PF00535 Glycosyl transferase family 2 LI62_RS01160 PF04748 Divergent polysaccharide deacetylase LI62_RS01165 PF01551 Peptidase family M23 LI62_RS01170 PF01676 Metalloenzyme superfamily LI62_RS01170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LI62_RS01175 PF00581 Rhodanese-like domain LI62_RS01180 PF00462 Glutaredoxin LI62_RS01185 PF02556 Preprotein translocase subunit SecB LI62_RS01190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LI62_RS01190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LI62_RS01195 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS01195 PF06426 Serine acetyltransferase, N-terminal LI62_RS01200 PF13616 PPIC-type PPIASE domain LI62_RS01205 PF00580 UvrD/REP helicase N-terminal domain LI62_RS01205 PF13361 UvrD-like helicase C-terminal domain LI62_RS01210 PF02541 Ppx/GppA phosphatase family LI62_RS01215 PF00270 DEAD/DEAH box helicase LI62_RS01215 PF00271 Helicase conserved C-terminal domain LI62_RS01220 PF00085 Thioredoxin LI62_RS01225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI62_RS01225 PF07497 Rho termination factor, RNA-binding domain LI62_RS01225 PF07498 Rho termination factor, N-terminal domain LI62_RS01230 PF00953 Glycosyl transferase family 4 LI62_RS01235 PF02706 Chain length determinant protein LI62_RS01240 PF02350 UDP-N-acetylglucosamine 2-epimerase LI62_RS01245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI62_RS01245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI62_RS01245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI62_RS01250 PF00583 Acetyltransferase (GNAT) family LI62_RS01255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LI62_RS01260 PF01943 LI62_RS01260 LI62_RS01265 PF07429 LI62_RS01265 LI62_RS01270 PF06899 LI62_RS01270 LI62_RS01275 PF03808 LI62_RS01275 LI62_RS01280 PF00324 Amino acid permease LI62_RS01305 PF07219 LI62_RS01305 LI62_RS01305 PF07719 Tetratricopeptide repeat LI62_RS01310 PF04375 LI62_RS01310 LI62_RS01315 PF02602 Uroporphyrinogen-III synthase HemD LI62_RS01320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LI62_RS01320 PF03900 Porphobilinogen deaminase, C-terminal domain LI62_RS01325 PF01295 LI62_RS01325 LI62_RS01325 PF12633 LI62_RS01325 LI62_RS01330 PF01491 Frataxin-like domain LI62_RS01335 PF13627 LI62_RS01335 LI62_RS01340 PF01678 Diaminopimelate epimerase LI62_RS01345 PF04340 Protein of unknown function, DUF484 LI62_RS01350 PF00589 Phage integrase family LI62_RS01350 PF02899 Phage integrase, N-terminal SAM-like domain LI62_RS01355 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS01360 PF00580 UvrD/REP helicase N-terminal domain LI62_RS01360 PF13361 UvrD-like helicase C-terminal domain LI62_RS01365 PF01544 CorA-like Mg2+ transporter protein LI62_RS01370 PF00892 EamA-like transporter family LI62_RS01375 PF03061 Thioesterase superfamily LI62_RS01380 PF02253 Phospholipase A1 LI62_RS01385 PF00270 DEAD/DEAH box helicase LI62_RS01385 PF00271 Helicase conserved C-terminal domain LI62_RS01385 PF00570 HRDC domain LI62_RS01385 PF09382 RQC domain LI62_RS01385 PF16124 LI62_RS01385 LI62_RS01390 PF01810 LI62_RS01390 LI62_RS01395 PF01810 LI62_RS01395 LI62_RS01400 PF12146 Putative lysophospholipase LI62_RS01405 PF08282 haloacid dehalogenase-like hydrolase LI62_RS01410 PF00892 EamA-like transporter family LI62_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS01415 PF03466 LysR substrate binding domain LI62_RS01420 PF01717 Cobalamin-independent synthase, Catalytic domain LI62_RS01420 PF08267 Cobalamin-independent synthase, N-terminal domain LI62_RS01425 PF01738 Dienelactone hydrolase family LI62_RS01430 PF01048 Phosphorylase superfamily LI62_RS01435 PF02646 LI62_RS01435 LI62_RS01440 PF01209 ubiE/COQ5 methyltransferase family LI62_RS01445 PF02036 SCP-2 sterol transfer family LI62_RS01450 PF03109 LI62_RS01450 LI62_RS01455 PF02416 mttA/Hcf106 family LI62_RS01465 PF00902 Sec-independent protein translocase protein (TatC) LI62_RS01470 PF01026 TatD related DNase LI62_RS01475 PF02357 Transcription termination factor nusG LI62_RS01480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI62_RS01485 PF00175 Oxidoreductase NAD-binding domain LI62_RS01485 PF00970 Oxidoreductase FAD-binding domain LI62_RS01490 PF00005 ABC transporter LI62_RS01505 PF11254 LI62_RS01505 LI62_RS01510 PF00313 'Cold-shock' DNA-binding domain LI62_RS01515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI62_RS01515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI62_RS01520 PF07690 Major Facilitator Superfamily LI62_RS01525 PF00294 pfkB family carbohydrate kinase LI62_RS01535 PF00356 Bacterial regulatory proteins, lacI family LI62_RS01535 PF13377 Periplasmic binding protein-like domain LI62_RS01540 PF00691 OmpA family LI62_RS01540 PF13488 LI62_RS01540 LI62_RS01545 PF00384 Molybdopterin oxidoreductase LI62_RS01545 PF01568 Molydopterin dinucleotide binding domain LI62_RS01550 PF13673 Acetyltransferase (GNAT) domain LI62_RS01555 PF03352 Methyladenine glycosylase LI62_RS01565 PF07690 Major Facilitator Superfamily LI62_RS01570 PF00884 Sulfatase LI62_RS01570 PF08019 LI62_RS01570 LI62_RS01580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS01590 PF12911 LI62_RS01590 LI62_RS01595 PF00005 ABC transporter LI62_RS01595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS01600 PF00005 ABC transporter LI62_RS01600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS01605 PF00485 Phosphoribulokinase / Uridine kinase family LI62_RS01630 PF00009 Elongation factor Tu GTP binding domain LI62_RS01630 PF03143 Elongation factor Tu C-terminal domain LI62_RS01630 PF03144 Elongation factor Tu domain 2 LI62_RS01635 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LI62_RS01640 PF00467 KOW motif LI62_RS01640 PF02357 Transcription termination factor nusG LI62_RS01645 PF00298 Ribosomal protein L11, RNA binding domain LI62_RS01645 PF03946 Ribosomal protein L11, N-terminal domain LI62_RS01650 PF00687 Ribosomal protein L1p/L10e family LI62_RS01655 PF00466 Ribosomal protein L10 LI62_RS01660 PF00542 Ribosomal protein L7/L12 C-terminal domain LI62_RS01660 PF16320 LI62_RS01660 LI62_RS01665 PF00562 RNA polymerase Rpb2, domain 6 LI62_RS01665 PF04560 RNA polymerase Rpb2, domain 7 LI62_RS01665 PF04561 RNA polymerase Rpb2, domain 2 LI62_RS01665 PF04563 RNA polymerase beta subunit LI62_RS01665 PF04565 RNA polymerase Rpb2, domain 3 LI62_RS01665 PF10385 RNA polymerase beta subunit external 1 domain LI62_RS01670 PF00623 RNA polymerase Rpb1, domain 2 LI62_RS01670 PF04983 RNA polymerase Rpb1, domain 3 LI62_RS01670 PF04997 RNA polymerase Rpb1, domain 1 LI62_RS01670 PF04998 RNA polymerase Rpb1, domain 5 LI62_RS01670 PF05000 RNA polymerase Rpb1, domain 4 LI62_RS01675 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI62_RS01680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS01685 PF00990 GGDEF domain LI62_RS01685 PF02743 Cache domain LI62_RS01690 PF04055 Radical SAM superfamily LI62_RS01690 PF06968 Biotin and Thiamin Synthesis associated domain LI62_RS01695 PF05690 Thiazole biosynthesis protein ThiG LI62_RS01700 PF02597 ThiS family LI62_RS01705 PF00899 ThiF family LI62_RS01710 PF02581 Thiamine monophosphate synthase/TENI LI62_RS01715 PF01964 ThiC family LI62_RS01715 PF13667 ThiC-associated domain LI62_RS01720 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LI62_RS01725 PF00293 NUDIX domain LI62_RS01725 PF09297 NADH pyrophosphatase zinc ribbon domain LI62_RS01730 PF01208 Uroporphyrinogen decarboxylase (URO-D) LI62_RS01735 PF04493 Endonuclease V LI62_RS01740 PF04222 Protein of unknown function (DUF416) LI62_RS01745 PF00216 Bacterial DNA-binding protein LI62_RS01750 PF07356 LI62_RS01750 LI62_RS01755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LI62_RS01755 PF02843 Phosphoribosylglycinamide synthetase, C domain LI62_RS01755 PF02844 Phosphoribosylglycinamide synthetase, N domain LI62_RS01760 PF01808 AICARFT/IMPCHase bienzyme LI62_RS01760 PF02142 MGS-like domain LI62_RS01785 PF04204 Homoserine O-succinyltransferase LI62_RS01790 PF01274 Malate synthase LI62_RS01795 PF00463 Isocitrate lyase family LI62_RS01800 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LI62_RS01805 PF01614 Bacterial transcriptional regulator LI62_RS01805 PF09339 IclR helix-turn-helix domain LI62_RS01810 PF00809 Pterin binding enzyme LI62_RS01810 PF02310 B12 binding domain LI62_RS01810 PF02574 Homocysteine S-methyltransferase LI62_RS01810 PF02607 B12 binding domain LI62_RS01810 PF02965 Vitamin B12 dependent methionine synthase, activation domain LI62_RS01815 PF02690 LI62_RS01815 LI62_RS01820 PF07362 Post-segregation antitoxin CcdA LI62_RS01825 PF01845 CcdB protein LI62_RS01830 PF00849 RNA pseudouridylate synthase LI62_RS01830 PF01479 S4 domain LI62_RS01835 PF11656 LI62_RS01835 LI62_RS01840 PF01758 Sodium Bile acid symporter family LI62_RS01845 PF00696 Amino acid kinase family LI62_RS01850 PF00342 Phosphoglucose isomerase LI62_RS01855 PF11106 LI62_RS01855 LI62_RS01860 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB LI62_RS01865 PF06251 Capsule biosynthesis GfcC LI62_RS01870 PF06082 LI62_RS01870 LI62_RS01875 PF06146 LI62_RS01875 LI62_RS01880 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS01885 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS01885 PF14785 Maltose transport system permease protein MalF P2 domain LI62_RS01890 PF13416 Bacterial extracellular solute-binding protein LI62_RS01895 PF00005 ABC transporter LI62_RS01895 PF08402 TOBE domain LI62_RS01900 PF02264 LamB porin LI62_RS01905 PF07148 LI62_RS01905 LI62_RS01910 PF04345 Chorismate lyase LI62_RS01915 PF01040 UbiA prenyltransferase family LI62_RS01920 PF01553 Acyltransferase LI62_RS01925 PF01219 Prokaryotic diacylglycerol kinase LI62_RS01930 PF00717 Peptidase S24-like LI62_RS01930 PF01726 LexA DNA binding domain LI62_RS01935 PF01554 MatE LI62_RS01940 PF05532 CsbD-like LI62_RS01945 PF01475 Ferric uptake regulator family LI62_RS01950 PF07883 Cupin domain LI62_RS01955 PF13729 LI62_RS01955 LI62_RS01960 PF01207 Dihydrouridine synthase (Dus) LI62_RS01965 PF09583 LI62_RS01965 LI62_RS01970 PF00107 Zinc-binding dehydrogenase LI62_RS01970 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS01975 PF00772 DnaB-like helicase N terminal domain LI62_RS01975 PF03796 DnaB-like helicase C terminal domain LI62_RS01980 PF00842 Alanine racemase, C-terminal domain LI62_RS01980 PF01168 Alanine racemase, N-terminal domain LI62_RS01985 PF00155 Aminotransferase class I and II LI62_RS01990 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LI62_RS01995 PF01894 Uncharacterised protein family UPF0047 LI62_RS02000 PF04237 YjbR LI62_RS02005 PF00005 ABC transporter LI62_RS02010 PF00436 Single-strand binding protein family LI62_RS02015 PF15940 LI62_RS02015 LI62_RS02020 PF00990 GGDEF domain LI62_RS02025 PF00563 EAL domain LI62_RS02025 PF12792 LI62_RS02025 LI62_RS02030 PF12833 Helix-turn-helix domain LI62_RS02035 PF00376 MerR family regulatory protein LI62_RS02035 PF09278 MerR, DNA binding LI62_RS02040 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS02040 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS02045 PF00860 Permease family LI62_RS02050 PF00999 Sodium/hydrogen exchanger family LI62_RS02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS02055 PF03466 LysR substrate binding domain LI62_RS02060 PF03788 LI62_RS02060 LI62_RS02065 PF04172 LI62_RS02065 LI62_RS02070 PF00474 Sodium:solute symporter family LI62_RS02075 PF04341 LI62_RS02075 LI62_RS02080 PF00501 AMP-binding enzyme LI62_RS02080 PF13193 AMP-binding enzyme C-terminal domain LI62_RS02080 PF16177 LI62_RS02080 LI62_RS02085 PF00375 Sodium:dicarboxylate symporter family LI62_RS02090 PF08238 Sel1 repeat LI62_RS02095 PF01848 LI62_RS02095 LI62_RS02100 PF00665 Integrase core domain LI62_RS02100 PF13276 LI62_RS02100 LI62_RS02105 PF13518 Helix-turn-helix domain LI62_RS02110 PF00384 Molybdopterin oxidoreductase LI62_RS02110 PF01568 Molydopterin dinucleotide binding domain LI62_RS02115 PF00384 Molybdopterin oxidoreductase LI62_RS02115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS02120 PF00072 Response regulator receiver domain LI62_RS02120 PF00486 Transcriptional regulatory protein, C terminal LI62_RS02125 PF00294 pfkB family carbohydrate kinase LI62_RS02130 PF01116 Fructose-bisphosphate aldolase class-II LI62_RS02135 PF07385 Protein of unknown function (DUF1498) LI62_RS02140 PF13407 Periplasmic binding protein domain LI62_RS02145 PF02653 LI62_RS02145 LI62_RS02150 PF00005 ABC transporter LI62_RS02155 PF00072 Response regulator receiver domain LI62_RS02155 PF00672 HAMP domain LI62_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS02160 PF00480 ROK family LI62_RS02165 PF00834 Ribulose-phosphate 3 epimerase family LI62_RS02170 PF02653 LI62_RS02170 LI62_RS02175 PF00005 ABC transporter LI62_RS02180 PF13407 Periplasmic binding protein domain LI62_RS02185 PF01380 SIS domain LI62_RS02185 PF01418 Helix-turn-helix domain, rpiR family LI62_RS02190 PF02502 Ribose/Galactose Isomerase LI62_RS02200 PF12706 Beta-lactamase superfamily domain LI62_RS02205 PF00583 Acetyltransferase (GNAT) family LI62_RS02210 PF13238 AAA domain LI62_RS02215 PF07969 Amidohydrolase family LI62_RS02220 PF00005 ABC transporter LI62_RS02225 PF00005 ABC transporter LI62_RS02230 PF06007 LI62_RS02230 LI62_RS02235 PF05861 LI62_RS02235 LI62_RS02240 PF05845 Bacterial phosphonate metabolism protein (PhnH) LI62_RS02245 PF06754 LI62_RS02245 LI62_RS02250 PF00392 Bacterial regulatory proteins, gntR family LI62_RS02250 PF07702 UTRA domain LI62_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS02260 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein LI62_RS02265 PF00005 ABC transporter LI62_RS02270 PF06983 3-demethylubiquinone-9 3-methyltransferase LI62_RS02275 PF03831 PhnA protein LI62_RS02275 PF08274 PhnA Zinc-Ribbon LI62_RS02280 PF00350 Dynamin family LI62_RS02285 PF13990 LI62_RS02285 LI62_RS02290 PF03812 LI62_RS02290 LI62_RS02295 PF00083 Sugar (and other) transporter LI62_RS02295 PF08946 Osmosensory transporter coiled coil LI62_RS02300 PF03824 LI62_RS02300 LI62_RS02325 PF09997 LI62_RS02325 LI62_RS02335 PF02311 AraC-like ligand binding domain LI62_RS02335 PF12833 Helix-turn-helix domain LI62_RS02340 PF01810 LI62_RS02340 LI62_RS02350 PF02683 LI62_RS02350 LI62_RS02350 PF11412 Disulphide bond corrector protein DsbC LI62_RS02350 PF13899 Thioredoxin-like LI62_RS02355 PF03091 CutA1 divalent ion tolerance protein LI62_RS02360 PF03605 LI62_RS02360 LI62_RS02365 PF00206 Lyase LI62_RS02365 PF10415 Fumarase C C-terminus LI62_RS02370 PF04186 LI62_RS02370 LI62_RS02375 PF13520 Amino acid permease LI62_RS02380 PF00166 Chaperonin 10 Kd subunit LI62_RS02385 PF00118 TCP-1/cpn60 chaperonin family LI62_RS02390 PF01979 Amidohydrolase family LI62_RS02395 PF07670 Nucleoside recognition LI62_RS02400 PF07670 Nucleoside recognition LI62_RS02405 PF13698 LI62_RS02405 LI62_RS02410 PF04055 Radical SAM superfamily LI62_RS02410 PF13353 4Fe-4S single cluster domain LI62_RS02415 PF01132 Elongation factor P (EF-P) OB domain LI62_RS02415 PF08207 Elongation factor P (EF-P) KOW-like domain LI62_RS02415 PF09285 Elongation factor P, C-terminal LI62_RS02420 PF08085 LI62_RS02420 LI62_RS02425 PF08085 LI62_RS02425 LI62_RS02430 PF00196 Bacterial regulatory proteins, luxR family LI62_RS02435 PF00893 Small Multidrug Resistance protein LI62_RS02440 PF08212 Lipocalin-like domain LI62_RS02445 PF00144 Beta-lactamase LI62_RS02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS02450 PF03466 LysR substrate binding domain LI62_RS02455 PF02313 Fumarate reductase subunit D LI62_RS02460 PF02300 Fumarate reductase subunit C LI62_RS02465 PF13085 2Fe-2S iron-sulfur cluster binding domain LI62_RS02465 PF13183 4Fe-4S dicluster domain LI62_RS02470 PF00890 FAD binding domain LI62_RS02470 PF02910 Fumarate reductase flavoprotein C-term LI62_RS02475 PF00152 tRNA synthetases class II (D, K and N) LI62_RS02480 PF13520 Amino acid permease LI62_RS02485 PF00924 Mechanosensitive ion channel LI62_RS02485 PF12794 LI62_RS02485 LI62_RS02485 PF12795 LI62_RS02485 LI62_RS02490 PF02666 LI62_RS02490 LI62_RS02495 PF03193 Protein of unknown function, DUF258 LI62_RS02500 PF00929 Exonuclease LI62_RS02520 PF08331 LI62_RS02520 LI62_RS02520 PF13484 LI62_RS02520 LI62_RS02525 PF01256 Carbohydrate kinase LI62_RS02525 PF03853 YjeF-related protein N-terminus LI62_RS02530 PF02367 Uncharacterised P-loop hydrolase UPF0079 LI62_RS02535 PF01520 N-acetylmuramoyl-L-alanine amidase LI62_RS02540 PF01119 DNA mismatch repair protein, C-terminal domain LI62_RS02540 PF08676 MutL C terminal dimerisation domain LI62_RS02540 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS02545 PF01715 IPP transferase LI62_RS02555 PF01926 50S ribosome-binding GTPase LI62_RS02555 PF13167 LI62_RS02555 LI62_RS02555 PF16360 LI62_RS02555 LI62_RS02560 PF01145 SPFH domain / Band 7 family LI62_RS02560 PF12221 LI62_RS02560 LI62_RS02565 PF01145 SPFH domain / Band 7 family LI62_RS02570 PF09838 LI62_RS02570 LI62_RS02575 PF00709 Adenylosuccinate synthetase LI62_RS02580 PF02082 Transcriptional regulator LI62_RS02585 PF00575 S1 RNA binding domain LI62_RS02585 PF00773 RNB domain LI62_RS02585 PF08206 Ribonuclease B OB domain LI62_RS02585 PF08461 Ribonuclease R winged-helix domain LI62_RS02590 PF00588 SpoU rRNA Methylase family LI62_RS02590 PF08032 RNA 2'-O ribose methyltransferase substrate binding LI62_RS02595 PF00083 Sugar (and other) transporter LI62_RS02595 PF07690 Major Facilitator Superfamily LI62_RS02600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI62_RS02600 PF02770 Acyl-CoA dehydrogenase, middle domain LI62_RS02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS02605 PF00672 HAMP domain LI62_RS02605 PF17201 LI62_RS02605 LI62_RS02610 PF07338 Protein of unknown function (DUF1471) LI62_RS02615 PF07338 Protein of unknown function (DUF1471) LI62_RS02620 PF00326 Prolyl oligopeptidase family LI62_RS02625 PF00455 LI62_RS02625 LI62_RS02625 PF08220 DeoR-like helix-turn-helix domain LI62_RS02630 PF13483 Beta-lactamase superfamily domain LI62_RS02635 PF03611 LI62_RS02635 LI62_RS02640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS02645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS02650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS02655 PF01261 Xylose isomerase-like TIM barrel LI62_RS02660 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS02665 PF07338 Protein of unknown function (DUF1471) LI62_RS02670 PF01250 Ribosomal protein S6 LI62_RS02675 PF00436 Single-strand binding protein family LI62_RS02680 PF01084 Ribosomal protein S18 LI62_RS02685 PF01281 Ribosomal protein L9, N-terminal domain LI62_RS02685 PF03948 Ribosomal protein L9, C-terminal domain LI62_RS02690 PF00892 EamA-like transporter family LI62_RS02695 PF04225 Opacity-associated protein A LysM-like domain LI62_RS02695 PF08525 LI62_RS02695 LI62_RS02700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI62_RS02700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LI62_RS02705 PF00324 Amino acid permease LI62_RS02710 PF01814 Hemerythrin HHE cation binding domain LI62_RS02710 PF04405 LI62_RS02710 LI62_RS02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS02715 PF00672 HAMP domain LI62_RS02715 PF02203 Tar ligand binding domain homologue LI62_RS02720 PF00892 EamA-like transporter family LI62_RS02725 PF02311 AraC-like ligand binding domain LI62_RS02725 PF12833 Helix-turn-helix domain LI62_RS02730 PF05368 NmrA-like family LI62_RS02735 PF01638 HxlR-like helix-turn-helix LI62_RS02740 PF00149 Calcineurin-like phosphoesterase LI62_RS02740 PF02872 5'-nucleotidase, C-terminal domain LI62_RS02745 PF00459 Inositol monophosphatase family LI62_RS02750 PF09695 LI62_RS02750 LI62_RS02755 PF06526 Protein of unknown function (DUF1107) LI62_RS02760 PF05638 Protein of unknown function (DUF796) LI62_RS02770 PF00571 CBS domain LI62_RS02770 PF01595 LI62_RS02770 LI62_RS02770 PF03471 Transporter associated domain LI62_RS02775 PF01625 Peptide methionine sulfoxide reductase LI62_RS02780 PF01103 Surface antigen LI62_RS02780 PF07244 Surface antigen variable number repeat LI62_RS02785 PF04357 LI62_RS02785 LI62_RS02790 PF06094 AIG2-like family LI62_RS02795 PF00719 Inorganic pyrophosphatase LI62_RS02800 PF13407 Periplasmic binding protein domain LI62_RS02805 PF00005 ABC transporter LI62_RS02810 PF02653 LI62_RS02810 LI62_RS02815 PF02653 LI62_RS02815 LI62_RS02820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS02820 PF00672 HAMP domain LI62_RS02820 PF02203 Tar ligand binding domain homologue LI62_RS02825 PF00316 Fructose-1-6-bisphosphatase LI62_RS02830 PF01225 Mur ligase family, catalytic domain LI62_RS02830 PF02875 Mur ligase family, glutamate ligase domain LI62_RS02830 PF08245 Mur ligase middle domain LI62_RS02835 PF04751 Protein of unknown function (DUF615) LI62_RS02840 PF01523 Putative modulator of DNA gyrase LI62_RS02845 PF07361 Cytochrome b562 LI62_RS02855 PF00874 PRD domain LI62_RS02860 PF14272 LI62_RS02860 LI62_RS02865 PF14189 LI62_RS02865 LI62_RS02870 PF14188 LI62_RS02870 LI62_RS02875 PF14187 LI62_RS02875 LI62_RS02880 PF01979 Amidohydrolase family LI62_RS02885 PF03841 L-seryl-tRNA selenium transferase LI62_RS02890 PF07071 Protein of unknown function (DUF1341) LI62_RS02895 PF10282 Lactonase, 7-bladed beta-propeller LI62_RS02900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS02900 PF00874 PRD domain LI62_RS02900 PF05043 Mga helix-turn-helix domain LI62_RS02900 PF08279 HTH domain LI62_RS02905 PF13353 4Fe-4S single cluster domain LI62_RS02910 PF03477 ATP cone domain LI62_RS02910 PF13597 Anaerobic ribonucleoside-triphosphate reductase LI62_RS02915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS02920 PF01074 Glycosyl hydrolases family 38 N-terminal domain LI62_RS02920 PF07748 Glycosyl hydrolases family 38 C-terminal domain LI62_RS02920 PF09261 Alpha mannosidase, middle domain LI62_RS02925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS02925 PF02378 Phosphotransferase system, EIIC LI62_RS02930 PF01380 SIS domain LI62_RS02930 PF01418 Helix-turn-helix domain, rpiR family LI62_RS02935 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI62_RS02940 PF00128 Alpha amylase, catalytic domain LI62_RS02940 PF11941 Domain of unknown function (DUF3459) LI62_RS02945 PF00367 phosphotransferase system, EIIB LI62_RS02945 PF02378 Phosphotransferase system, EIIC LI62_RS02950 PF00356 Bacterial regulatory proteins, lacI family LI62_RS02950 PF13377 Periplasmic binding protein-like domain LI62_RS02955 PF00122 E1-E2 ATPase LI62_RS02955 PF00689 Cation transporting ATPase, C-terminus LI62_RS02955 PF00690 Cation transporter/ATPase, N-terminus LI62_RS02955 PF00702 haloacid dehalogenase-like hydrolase LI62_RS02960 PF00728 Glycosyl hydrolase family 20, catalytic domain LI62_RS02960 PF02838 Glycosyl hydrolase family 20, domain 2 LI62_RS02965 PF03067 Chitin binding domain LI62_RS02970 PF01042 Endoribonuclease L-PSP LI62_RS02975 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LI62_RS02975 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LI62_RS02980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI62_RS02980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI62_RS02985 PF01316 Arginine repressor, DNA binding domain LI62_RS02985 PF02863 Arginine repressor, C-terminal domain LI62_RS02990 PF03606 LI62_RS02990 LI62_RS02995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI62_RS02995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI62_RS03000 PF00696 Amino acid kinase family LI62_RS03005 PF02274 Amidinotransferase LI62_RS03010 PF04074 Domain of unknown function (DUF386) LI62_RS03015 PF00701 Dihydrodipicolinate synthetase family LI62_RS03020 PF00920 Dehydratase family LI62_RS03025 PF13347 MFS/sugar transport protein LI62_RS03030 PF04616 Glycosyl hydrolases family 43 LI62_RS03030 PF07081 Protein of unknown function (DUF1349) LI62_RS03035 PF01614 Bacterial transcriptional regulator LI62_RS03035 PF09339 IclR helix-turn-helix domain LI62_RS03040 PF12883 Protein of unknown function (DUF3828) LI62_RS03050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LI62_RS03050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LI62_RS03055 PF06877 Regulator of ribonuclease activity B LI62_RS03060 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LI62_RS03085 PF00589 Phage integrase family LI62_RS03140 PF00563 EAL domain LI62_RS03145 PF00589 Phage integrase family LI62_RS03165 PF13676 TIR domain LI62_RS03170 PF02384 N-6 DNA Methylase LI62_RS03170 PF12161 HsdM N-terminal domain LI62_RS03175 PF02384 N-6 DNA Methylase LI62_RS03175 PF12161 HsdM N-terminal domain LI62_RS03180 PF01420 Type I restriction modification DNA specificity domain LI62_RS03185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LI62_RS03185 PF04851 Type III restriction enzyme, res subunit LI62_RS03190 PF16263 LI62_RS03190 LI62_RS03195 PF13391 LI62_RS03195 LI62_RS03205 PF08845 LI62_RS03205 LI62_RS03215 PF01320 Colicin immunity protein / pyocin immunity protein LI62_RS03220 PF05488 PAAR motif LI62_RS03220 PF06958 S-type Pyocin LI62_RS03235 PF05638 Protein of unknown function (DUF796) LI62_RS03250 PF00579 tRNA synthetases class I (W and Y) LI62_RS03255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS03260 PF00356 Bacterial regulatory proteins, lacI family LI62_RS03260 PF13377 Periplasmic binding protein-like domain LI62_RS03265 PF00150 Cellulase (glycosyl hydrolase family 5) LI62_RS03270 PF13347 MFS/sugar transport protein LI62_RS03275 PF00561 alpha/beta hydrolase fold LI62_RS03280 PF05977 Transmembrane secretion effector LI62_RS03285 PF07681 LI62_RS03285 LI62_RS03290 PF07969 Amidohydrolase family LI62_RS03295 PF00857 Isochorismatase family LI62_RS03300 PF07235 LI62_RS03300 LI62_RS03305 PF07235 LI62_RS03305 LI62_RS03310 PF00072 Response regulator receiver domain LI62_RS03315 PF00069 Protein kinase domain LI62_RS03315 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS03315 PF01590 GAF domain LI62_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS03315 PF08447 PAS fold LI62_RS03315 PF13191 AAA ATPase domain LI62_RS03320 PF00072 Response regulator receiver domain LI62_RS03320 PF00196 Bacterial regulatory proteins, luxR family LI62_RS03325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS03330 PF00574 Clp protease LI62_RS03335 PF08007 Cupin superfamily protein LI62_RS03345 PF09939 LI62_RS03345 LI62_RS03350 PF12833 Helix-turn-helix domain LI62_RS03355 PF00593 TonB dependent receptor LI62_RS03355 PF07715 TonB-dependent Receptor Plug Domain LI62_RS03360 PF00155 Aminotransferase class I and II LI62_RS03360 PF00392 Bacterial regulatory proteins, gntR family LI62_RS03365 PF06568 LI62_RS03365 LI62_RS03370 PF00155 Aminotransferase class I and II LI62_RS03370 PF00392 Bacterial regulatory proteins, gntR family LI62_RS03375 PF02627 Carboxymuconolactone decarboxylase family LI62_RS03380 PF03992 Antibiotic biosynthesis monooxygenase LI62_RS03385 PF12840 Helix-turn-helix domain LI62_RS03390 PF01047 MarR family LI62_RS03395 PF13533 Biotin-lipoyl like LI62_RS03400 PF11168 LI62_RS03400 LI62_RS03405 PF04286 LI62_RS03405 LI62_RS03410 PF04365 Protein of unknown function (DUF497) LI62_RS03415 PF14384 LI62_RS03415 LI62_RS03420 PF01810 LI62_RS03420 LI62_RS03425 PF02311 AraC-like ligand binding domain LI62_RS03425 PF12833 Helix-turn-helix domain LI62_RS03430 PF00171 Aldehyde dehydrogenase family LI62_RS03435 PF07437 LI62_RS03435 LI62_RS03440 PF13449 Esterase-like activity of phytase LI62_RS03445 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI62_RS03445 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI62_RS03450 PF04328 LI62_RS03450 LI62_RS03455 PF02554 LI62_RS03455 LI62_RS03455 PF13722 LI62_RS03455 LI62_RS03460 PF08279 HTH domain LI62_RS03465 PF01613 Flavin reductase like domain LI62_RS03470 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LI62_RS03470 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LI62_RS03475 PF07883 Cupin domain LI62_RS03475 PF12833 Helix-turn-helix domain LI62_RS03480 PF07690 Major Facilitator Superfamily LI62_RS03485 PF03328 HpcH/HpaI aldolase/citrate lyase family LI62_RS03490 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI62_RS03495 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LI62_RS03500 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI62_RS03505 PF00171 Aldehyde dehydrogenase family LI62_RS03510 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI62_RS03515 PF01047 MarR family LI62_RS03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS03520 PF00672 HAMP domain LI62_RS03520 PF02203 Tar ligand binding domain homologue LI62_RS03525 PF00583 Acetyltransferase (GNAT) family LI62_RS03530 PF00884 Sulfatase LI62_RS03535 PF10696 LI62_RS03535 LI62_RS03540 PF01695 IstB-like ATP binding protein LI62_RS03550 PF02566 OsmC-like protein LI62_RS03555 PF01047 MarR family LI62_RS03560 PF12821 LI62_RS03560 LI62_RS03565 PF06738 LI62_RS03565 LI62_RS03570 PF00196 Bacterial regulatory proteins, luxR family LI62_RS03575 PF00196 Bacterial regulatory proteins, luxR family LI62_RS03580 PF04073 Aminoacyl-tRNA editing domain LI62_RS03585 PF02378 Phosphotransferase system, EIIC LI62_RS03590 PF06276 Ferric iron reductase FhuF-like transporter LI62_RS03590 PF11575 LI62_RS03590 LI62_RS03595 PF00990 GGDEF domain LI62_RS03600 PF07256 LI62_RS03600 LI62_RS03620 PF05175 Methyltransferase small domain LI62_RS03620 PF08468 Methyltransferase small domain N-terminal LI62_RS03625 PF03603 DNA polymerase III psi subunit LI62_RS03630 PF00583 Acetyltransferase (GNAT) family LI62_RS03635 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS03640 PF00009 Elongation factor Tu GTP binding domain LI62_RS03640 PF03144 Elongation factor Tu domain 2 LI62_RS03640 PF16658 LI62_RS03640 LI62_RS03645 PF04972 BON domain LI62_RS03650 PF07043 LI62_RS03650 LI62_RS03655 PF01734 Patatin-like phospholipase LI62_RS03660 PF01026 TatD related DNase LI62_RS03665 PF04055 Radical SAM superfamily LI62_RS03665 PF13353 4Fe-4S single cluster domain LI62_RS03670 PF11230 LI62_RS03670 LI62_RS03675 PF01791 DeoC/LacD family aldolase LI62_RS03680 PF00591 Glycosyl transferase family, a/b domain LI62_RS03680 PF02885 Glycosyl transferase family, helical bundle domain LI62_RS03680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LI62_RS03685 PF01676 Metalloenzyme superfamily LI62_RS03690 PF01048 Phosphorylase superfamily LI62_RS03695 PF03099 Biotin/lipoate A/B protein ligase family LI62_RS03695 PF10437 Bacterial lipoate protein ligase C-terminus LI62_RS03700 PF10144 LI62_RS03700 LI62_RS03705 PF12710 haloacid dehalogenase-like hydrolase LI62_RS03710 PF13481 AAA domain LI62_RS03710 PF13541 Subunit ChlI of Mg-chelatase LI62_RS03715 PF01381 Helix-turn-helix LI62_RS03715 PF13521 AAA domain LI62_RS03720 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS03720 PF13602 Zinc-binding dehydrogenase LI62_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS03725 PF03466 LysR substrate binding domain LI62_RS03730 PF00005 ABC transporter LI62_RS03730 PF12848 ABC transporter LI62_RS03735 PF01464 Transglycosylase SLT domain LI62_RS03735 PF14718 Soluble lytic murein transglycosylase L domain LI62_RS03740 PF01371 Trp repressor protein LI62_RS03745 PF01931 Protein of unknown function DUF84 LI62_RS03750 PF00300 Histidine phosphatase superfamily (branch 1) LI62_RS03755 PF06445 GyrI-like small molecule binding domain LI62_RS03755 PF12833 Helix-turn-helix domain LI62_RS03760 PF05981 LI62_RS03760 LI62_RS03765 PF00072 Response regulator receiver domain LI62_RS03765 PF00486 Transcriptional regulatory protein, C terminal LI62_RS03770 PF00588 SpoU rRNA Methylase family LI62_RS03775 PF00696 Amino acid kinase family LI62_RS03775 PF00742 Homoserine dehydrogenase LI62_RS03775 PF01842 ACT domain LI62_RS03775 PF03447 Homoserine dehydrogenase, NAD binding domain LI62_RS03775 PF13840 ACT domain LI62_RS03780 PF00288 GHMP kinases N terminal domain LI62_RS03780 PF08544 GHMP kinases C terminal LI62_RS03785 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS03785 PF14821 Threonine synthase N terminus LI62_RS03790 PF10697 LI62_RS03790 LI62_RS03795 PF03883 LI62_RS03795 LI62_RS03800 PF01235 LI62_RS03800 LI62_RS03805 PF00923 Transaldolase LI62_RS03810 PF00994 Probable molybdopterin binding domain LI62_RS03815 PF07690 Major Facilitator Superfamily LI62_RS03820 PF01184 LI62_RS03820 LI62_RS03830 PF00012 Hsp70 protein LI62_RS03835 PF00226 DnaJ domain LI62_RS03835 PF00684 DnaJ central domain LI62_RS03835 PF01556 DnaJ C terminal domain LI62_RS03840 PF06965 Na+/H+ antiporter 1 LI62_RS03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS03845 PF03466 LysR substrate binding domain LI62_RS03850 PF01649 Ribosomal protein S20 LI62_RS03855 PF01687 Riboflavin kinase LI62_RS03855 PF06574 FAD synthetase LI62_RS03860 PF00133 tRNA synthetases class I (I, L, M and V) LI62_RS03860 PF06827 Zinc finger found in FPG and IleRS LI62_RS03860 PF08264 Anticodon-binding domain of tRNA LI62_RS03865 PF01252 LI62_RS03865 LI62_RS03870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI62_RS03875 PF02401 LytB protein LI62_RS03880 PF06560 Glucose-6-phosphate isomerase (GPI) LI62_RS03885 PF06560 Glucose-6-phosphate isomerase (GPI) LI62_RS03890 PF03613 LI62_RS03890 LI62_RS03895 PF03609 LI62_RS03895 LI62_RS03900 PF03830 PTS system sorbose subfamily IIB component LI62_RS03905 PF03610 PTS system fructose IIA component LI62_RS03915 PF00356 Bacterial regulatory proteins, lacI family LI62_RS03915 PF13377 Periplasmic binding protein-like domain LI62_RS03920 PF01113 Dihydrodipicolinate reductase, N-terminus LI62_RS03920 PF05173 Dihydrodipicolinate reductase, C-terminus LI62_RS03925 PF00117 Glutamine amidotransferase class-I LI62_RS03925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LI62_RS03930 PF02142 MGS-like domain LI62_RS03930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI62_RS03930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LI62_RS03935 PF06004 Bacterial protein of unknown function (DUF903) LI62_RS03940 PF03797 Autotransporter beta-domain LI62_RS03945 PF02525 Flavodoxin-like fold LI62_RS03950 PF00999 Sodium/hydrogen exchanger family LI62_RS03950 PF02254 TrkA-N domain LI62_RS03955 PF00186 Dihydrofolate reductase LI62_RS03960 PF00149 Calcineurin-like phosphoesterase LI62_RS03965 PF04379 Protein of unknown function (DUF525) LI62_RS03970 PF00398 Ribosomal RNA adenine dimethylase LI62_RS03975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LI62_RS03980 PF00639 PPIC-type PPIASE domain LI62_RS03980 PF09312 SurA N-terminal domain LI62_RS03985 PF03968 OstA-like protein LI62_RS03985 PF04453 Organic solvent tolerance protein LI62_RS03990 PF00226 DnaJ domain LI62_RS03990 PF05099 Tellurite resistance protein TerB LI62_RS03995 PF00849 RNA pseudouridylate synthase LI62_RS04000 PF00176 SNF2 family N-terminal domain LI62_RS04000 PF00271 Helicase conserved C-terminal domain LI62_RS04000 PF12137 RNA polymerase recycling family C-terminal LI62_RS04005 PF00136 DNA polymerase family B LI62_RS04005 PF03104 DNA polymerase family B, exonuclease domain LI62_RS04010 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS04015 PF02610 L-arabinose isomerase LI62_RS04015 PF11762 L-arabinose isomerase C-terminal domain LI62_RS04020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS04025 PF02311 AraC-like ligand binding domain LI62_RS04025 PF12833 Helix-turn-helix domain LI62_RS04030 PF09335 LI62_RS04030 LI62_RS04035 PF00005 ABC transporter LI62_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS04045 PF13343 Bacterial extracellular solute-binding protein LI62_RS04050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS04050 PF12793 LI62_RS04050 LI62_RS04055 PF15894 LI62_RS04055 LI62_RS04060 PF07690 Major Facilitator Superfamily LI62_RS04065 PF01848 LI62_RS04065 LI62_RS04070 PF00694 Aconitase C-terminal domain LI62_RS04075 PF00330 Aconitase family (aconitate hydratase) LI62_RS04080 PF00180 Isocitrate/isopropylmalate dehydrogenase LI62_RS04085 PF00682 HMGL-like LI62_RS04085 PF08502 LeuA allosteric (dimerisation) domain LI62_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS04090 PF03466 LysR substrate binding domain LI62_RS04095 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS04095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS04095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS04100 PF01842 ACT domain LI62_RS04100 PF10369 Small subunit of acetolactate synthase LI62_RS04105 PF00356 Bacterial regulatory proteins, lacI family LI62_RS04105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS04110 PF02381 MraZ protein LI62_RS04115 PF01795 MraW methylase family LI62_RS04120 PF04999 LI62_RS04120 LI62_RS04125 PF00905 Penicillin binding protein transpeptidase domain LI62_RS04125 PF03717 Penicillin-binding Protein dimerisation domain LI62_RS04130 PF01225 Mur ligase family, catalytic domain LI62_RS04130 PF02875 Mur ligase family, glutamate ligase domain LI62_RS04130 PF08245 Mur ligase middle domain LI62_RS04135 PF01225 Mur ligase family, catalytic domain LI62_RS04135 PF02875 Mur ligase family, glutamate ligase domain LI62_RS04135 PF08245 Mur ligase middle domain LI62_RS04140 PF00953 Glycosyl transferase family 4 LI62_RS04140 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LI62_RS04145 PF02875 Mur ligase family, glutamate ligase domain LI62_RS04145 PF08245 Mur ligase middle domain LI62_RS04150 PF01098 LI62_RS04150 LI62_RS04155 PF03033 Glycosyltransferase family 28 N-terminal domain LI62_RS04155 PF04101 Glycosyltransferase family 28 C-terminal domain LI62_RS04160 PF01225 Mur ligase family, catalytic domain LI62_RS04160 PF02875 Mur ligase family, glutamate ligase domain LI62_RS04160 PF08245 Mur ligase middle domain LI62_RS04165 PF01820 D-ala D-ala ligase N-terminus LI62_RS04165 PF07478 D-ala D-ala ligase C-terminus LI62_RS04170 PF03799 Cell division protein FtsQ LI62_RS04170 PF08478 POTRA domain, FtsQ-type LI62_RS04175 PF02491 SHS2 domain inserted in FTSA LI62_RS04175 PF14450 Cell division protein FtsA LI62_RS04180 PF00091 Tubulin/FtsZ family, GTPase domain LI62_RS04180 PF12327 FtsZ family, C-terminal domain LI62_RS04185 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LI62_RS04190 PF06558 LI62_RS04190 LI62_RS04195 PF01043 SecA preprotein cross-linking domain LI62_RS04195 PF02810 SEC-C motif LI62_RS04195 PF07516 SecA Wing and Scaffold domain LI62_RS04195 PF07517 SecA DEAD-like domain LI62_RS04200 PF00293 NUDIX domain LI62_RS04205 PF03884 Domain of unknown function (DUF329) LI62_RS04210 PF07072 Protein of unknown function (DUF1342) LI62_RS04215 PF01121 Dephospho-CoA kinase LI62_RS04220 PF00478 IMP dehydrogenase / GMP reductase domain LI62_RS04225 PF00482 Type II secretion system (T2SS), protein F LI62_RS04230 PF00437 Type II/IV secretion system protein LI62_RS04235 PF13633 Prokaryotic N-terminal methylation site LI62_RS04240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LI62_RS04240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LI62_RS04245 PF01510 N-acetylmuramoyl-L-alanine amidase LI62_RS04250 PF17113 LI62_RS04250 LI62_RS04255 PF04616 Glycosyl hydrolases family 43 LI62_RS04260 PF13347 MFS/sugar transport protein LI62_RS04265 PF00324 Amino acid permease LI62_RS04275 PF00392 Bacterial regulatory proteins, gntR family LI62_RS04275 PF07729 FCD domain LI62_RS04280 PF00456 Transketolase, thiamine diphosphate binding domain LI62_RS04285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI62_RS04285 PF00364 Biotin-requiring enzyme LI62_RS04285 PF02817 e3 binding domain LI62_RS04290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI62_RS04290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS04295 PF11453 LI62_RS04295 LI62_RS04300 PF11737 LI62_RS04300 LI62_RS04305 PF00330 Aconitase family (aconitate hydratase) LI62_RS04305 PF06434 Aconitate hydratase 2 N-terminus LI62_RS04305 PF11791 Aconitate B N-terminal domain LI62_RS04310 PF06062 LI62_RS04310 LI62_RS04315 PF02675 S-adenosylmethionine decarboxylase LI62_RS04320 PF01564 Spermine/spermidine synthase LI62_RS04325 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) LI62_RS04330 PF00394 Multicopper oxidase LI62_RS04330 PF07731 Multicopper oxidase LI62_RS04330 PF07732 Multicopper oxidase LI62_RS04330 PF10518 TAT (twin-arginine translocation) pathway signal sequence LI62_RS04335 PF01011 PQQ enzyme repeat LI62_RS04340 PF00156 Phosphoribosyl transferase domain LI62_RS04345 PF00484 Carbonic anhydrase LI62_RS04350 PF00005 ABC transporter LI62_RS04355 PF01061 LI62_RS04355 LI62_RS04360 PF03610 PTS system fructose IIA component LI62_RS04365 PF01522 Polysaccharide deacetylase LI62_RS04370 PF00419 Fimbrial protein LI62_RS04375 PF00419 Fimbrial protein LI62_RS04385 PF00419 Fimbrial protein LI62_RS04390 PF00577 Outer membrane usher protein LI62_RS04390 PF13953 PapC C-terminal domain LI62_RS04390 PF13954 PapC N-terminal domain LI62_RS04395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS04395 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS04405 PF02261 Aspartate decarboxylase LI62_RS04410 PF02569 Pantoate-beta-alanine ligase LI62_RS04415 PF02548 Ketopantoate hydroxymethyltransferase LI62_RS04420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LI62_RS04425 PF01743 Poly A polymerase head domain LI62_RS04425 PF12626 Polymerase A arginine-rich C-terminus LI62_RS04425 PF12627 Probable RNA and SrmB- binding site of polymerase A LI62_RS04430 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI62_RS04435 PF01258 Prokaryotic dksA/traR C4-type zinc finger LI62_RS04440 PF03749 Sugar fermentation stimulation protein LI62_RS04445 PF02834 LigT like Phosphoesterase LI62_RS04450 PF00270 DEAD/DEAH box helicase LI62_RS04450 PF00271 Helicase conserved C-terminal domain LI62_RS04450 PF04408 Helicase associated domain (HA2) LI62_RS04450 PF08482 LI62_RS04450 LI62_RS04455 PF00905 Penicillin binding protein transpeptidase domain LI62_RS04455 PF00912 Transglycosylase LI62_RS04455 PF14812 LI62_RS04455 LI62_RS04455 PF14814 Bifunctional transglycosylase second domain LI62_RS04460 PF00419 Fimbrial protein LI62_RS04465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS04465 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS04470 PF00577 Outer membrane usher protein LI62_RS04470 PF13953 PapC C-terminal domain LI62_RS04470 PF13954 PapC N-terminal domain LI62_RS04475 PF00419 Fimbrial protein LI62_RS04480 PF00593 TonB dependent receptor LI62_RS04480 PF07715 TonB-dependent Receptor Plug Domain LI62_RS04485 PF00005 ABC transporter LI62_RS04490 PF01497 Periplasmic binding protein LI62_RS04495 PF01032 FecCD transport family LI62_RS04500 PF00202 Aminotransferase class-III LI62_RS04505 PF00654 Voltage gated chloride channel LI62_RS04510 PF01521 Iron-sulphur cluster biosynthesis LI62_RS04515 PF03458 LI62_RS04515 LI62_RS04520 PF01497 Periplasmic binding protein LI62_RS04525 PF01048 Phosphorylase superfamily LI62_RS04530 PF01966 HD domain LI62_RS04530 PF13286 Phosphohydrolase-associated domain LI62_RS04535 PF00595 PDZ domain (Also known as DHR or GLGF) LI62_RS04535 PF13180 PDZ domain LI62_RS04535 PF13365 Trypsin-like peptidase domain LI62_RS04540 PF05651 LI62_RS04540 LI62_RS04540 PF13556 PucR C-terminal helix-turn-helix domain LI62_RS04545 PF11944 LI62_RS04545 LI62_RS04550 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS04550 PF14602 Hexapeptide repeat of succinyl-transferase LI62_RS04550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LI62_RS04555 PF01842 ACT domain LI62_RS04555 PF01909 Nucleotidyltransferase domain LI62_RS04555 PF01966 HD domain LI62_RS04555 PF08335 GlnD PII-uridylyltransferase LI62_RS04560 PF00557 Metallopeptidase family M24 LI62_RS04565 PF00318 Ribosomal protein S2 LI62_RS04570 PF00889 Elongation factor TS LI62_RS04575 PF00696 Amino acid kinase family LI62_RS04580 PF01765 Ribosome recycling factor LI62_RS04585 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LI62_RS04585 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal LI62_RS04585 PF13288 DXP reductoisomerase C-terminal domain LI62_RS04590 PF01255 Putative undecaprenyl diphosphate synthase LI62_RS04595 PF01148 Cytidylyltransferase family LI62_RS04600 PF02163 Peptidase family M50 LI62_RS04600 PF13180 PDZ domain LI62_RS04605 PF01103 Surface antigen LI62_RS04605 PF07244 Surface antigen variable number repeat LI62_RS04610 PF03938 Outer membrane protein (OmpH-like) LI62_RS04615 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS04615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LI62_RS04615 PF14602 Hexapeptide repeat of succinyl-transferase LI62_RS04620 PF07977 FabA-like domain LI62_RS04625 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS04625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LI62_RS04630 PF02684 LI62_RS04630 LI62_RS04635 PF01351 Ribonuclease HII LI62_RS04640 PF01336 OB-fold nucleic acid binding domain LI62_RS04640 PF02811 PHP domain LI62_RS04640 PF07733 Bacterial DNA polymerase III alpha subunit LI62_RS04640 PF14579 Helix-hairpin-helix motif LI62_RS04645 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LI62_RS04650 PF01276 Orn/Lys/Arg decarboxylase, major domain LI62_RS04650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI62_RS04650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI62_RS04655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS04660 PF01171 PP-loop family LI62_RS04660 PF09179 TilS substrate binding domain LI62_RS04660 PF11734 TilS substrate C-terminal domain LI62_RS04665 PF07073 Modulator of Rho-dependent transcription termination (ROF) LI62_RS04670 PF06786 LI62_RS04670 LI62_RS04675 PF07152 YaeQ protein LI62_RS04680 PF00472 RF-1 domain LI62_RS04685 PF04170 NlpE N-terminal domain LI62_RS04685 PF17185 LI62_RS04685 LI62_RS04690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI62_RS04690 PF03129 Anticodon binding domain LI62_RS04690 PF04073 Aminoacyl-tRNA editing domain LI62_RS04695 PF01980 Uncharacterised protein family UPF0066 LI62_RS04700 PF16358 LI62_RS04700 LI62_RS04705 PF03180 NLPA lipoprotein LI62_RS04710 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS04715 PF00005 ABC transporter LI62_RS04715 PF09383 NIL domain LI62_RS04720 PF13242 HAD-hyrolase-like LI62_RS04755 PF00248 Aldo/keto reductase family LI62_RS04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS04760 PF03466 LysR substrate binding domain LI62_RS04765 PF07690 Major Facilitator Superfamily LI62_RS04770 PF03372 Endonuclease/Exonuclease/phosphatase family LI62_RS04775 PF08241 Methyltransferase domain LI62_RS04780 PF01464 Transglycosylase SLT domain LI62_RS04780 PF01476 LysM domain LI62_RS04785 PF00753 Metallo-beta-lactamase superfamily LI62_RS04785 PF16123 LI62_RS04785 LI62_RS04790 PF08241 Methyltransferase domain LI62_RS04795 PF00075 RNase H LI62_RS04800 PF00929 Exonuclease LI62_RS04810 PF00392 Bacterial regulatory proteins, gntR family LI62_RS04810 PF07729 FCD domain LI62_RS04815 PF00005 ABC transporter LI62_RS04815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS04820 PF00005 ABC transporter LI62_RS04820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS04825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS04835 PF12911 LI62_RS04835 LI62_RS04840 PF01019 Gamma-glutamyltranspeptidase LI62_RS04845 PF00795 Carbon-nitrogen hydrolase LI62_RS04850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LI62_RS04850 PF02770 Acyl-CoA dehydrogenase, middle domain LI62_RS04850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LI62_RS04850 PF09317 LI62_RS04850 LI62_RS04855 PF13580 SIS domain LI62_RS04860 PF13230 Glutamine amidotransferases class-II LI62_RS04865 PF03734 L,D-transpeptidase catalytic domain LI62_RS04870 PF05896 LI62_RS04870 LI62_RS04870 PF11973 LI62_RS04870 LI62_RS04875 PF03116 LI62_RS04875 LI62_RS04880 PF04205 FMN-binding domain LI62_RS04885 PF02508 LI62_RS04885 LI62_RS04890 PF02508 LI62_RS04890 LI62_RS04895 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS04895 PF00175 Oxidoreductase NAD-binding domain LI62_RS04895 PF00970 Oxidoreductase FAD-binding domain LI62_RS04900 PF04400 LI62_RS04900 LI62_RS04905 PF00817 impB/mucB/samB family LI62_RS04905 PF11798 IMS family HHH motif LI62_RS04905 PF11799 impB/mucB/samB family C-terminal domain LI62_RS04910 PF01546 Peptidase family M20/M25/M40 LI62_RS04910 PF07687 Peptidase dimerisation domain LI62_RS04915 PF00156 Phosphoribosyl transferase domain LI62_RS04920 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LI62_RS04925 PF07417 Transcriptional regulator Crl LI62_RS04930 PF00267 Gram-negative porin LI62_RS04935 PF00696 Amino acid kinase family LI62_RS04935 PF01472 PUA domain LI62_RS04940 PF00171 Aldehyde dehydrogenase family LI62_RS04950 PF13847 Methyltransferase domain LI62_RS04955 PF09857 LI62_RS04955 LI62_RS04960 PF00563 EAL domain LI62_RS04960 PF00990 GGDEF domain LI62_RS04965 PF00174 Oxidoreductase molybdopterin binding domain LI62_RS04970 PF00672 HAMP domain LI62_RS04970 PF00990 GGDEF domain LI62_RS04970 PF01590 GAF domain LI62_RS04975 PF01594 LI62_RS04975 LI62_RS04980 PF00324 Amino acid permease LI62_RS04985 PF02574 Homocysteine S-methyltransferase LI62_RS04990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI62_RS04995 PF00005 ABC transporter LI62_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS05005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LI62_RS05010 PF01553 Acyltransferase LI62_RS05010 PF13444 Acetyltransferase (GNAT) domain LI62_RS05015 PF00490 Delta-aminolevulinic acid dehydratase LI62_RS05025 PF03797 Autotransporter beta-domain LI62_RS05030 PF15977 LI62_RS05030 LI62_RS05035 PF00144 Beta-lactamase LI62_RS05040 PF05992 LI62_RS05040 LI62_RS05045 PF07759 LI62_RS05045 LI62_RS05050 PF10954 LI62_RS05050 LI62_RS05055 PF10953 LI62_RS05055 LI62_RS05060 PF01820 D-ala D-ala ligase N-terminus LI62_RS05060 PF07478 D-ala D-ala ligase C-terminus LI62_RS05065 PF06904 LI62_RS05065 LI62_RS05070 PF07690 Major Facilitator Superfamily LI62_RS05075 PF10796 LI62_RS05075 LI62_RS05080 PF07769 LI62_RS05080 LI62_RS05085 PF00990 GGDEF domain LI62_RS05085 PF05230 LI62_RS05085 LI62_RS05090 PF03807 NADP oxidoreductase coenzyme F420-dependent LI62_RS05090 PF14748 Pyrroline-5-carboxylate reductase dimerisation LI62_RS05095 PF02639 LI62_RS05095 LI62_RS05100 PF01202 Shikimate kinase LI62_RS05105 PF16362 LI62_RS05105 LI62_RS05110 PF07302 LI62_RS05110 LI62_RS05115 PF06865 Protein of unknown function (DUF1255) LI62_RS05120 PF04381 Putative exonuclease, RdgC LI62_RS05125 PF00480 ROK family LI62_RS05130 PF13476 AAA domain LI62_RS05130 PF13558 Putative exonuclease SbcCD, C subunit LI62_RS05135 PF00149 Calcineurin-like phosphoesterase LI62_RS05135 PF12320 Type 5 capsule protein repressor C-terminal domain LI62_RS05140 PF00072 Response regulator receiver domain LI62_RS05140 PF00486 Transcriptional regulatory protein, C terminal LI62_RS05145 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS05145 PF00989 PAS fold LI62_RS05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS05145 PF11808 LI62_RS05145 LI62_RS05150 PF05525 LI62_RS05150 LI62_RS05155 PF00324 Amino acid permease LI62_RS05160 PF00128 Alpha amylase, catalytic domain LI62_RS05160 PF02903 Alpha amylase, N-terminal ig-like domain LI62_RS05165 PF10101 LI62_RS05165 LI62_RS05170 PF13163 LI62_RS05170 LI62_RS05175 PF00578 AhpC/TSA family LI62_RS05175 PF10417 C-terminal domain of 1-Cys peroxiredoxin LI62_RS05180 PF04336 LI62_RS05180 LI62_RS05185 PF02547 Queuosine biosynthesis protein LI62_RS05190 PF01702 Queuine tRNA-ribosyltransferase LI62_RS05195 PF02699 Preprotein translocase subunit LI62_RS05200 PF02355 Protein export membrane protein LI62_RS05200 PF07549 SecD/SecF GG Motif LI62_RS05200 PF13721 SecD export protein N-terminal TM region LI62_RS05205 PF02355 Protein export membrane protein LI62_RS05205 PF07549 SecD/SecF GG Motif LI62_RS05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS05215 PF08279 HTH domain LI62_RS05215 PF13280 LI62_RS05215 LI62_RS05220 PF03502 Nucleoside-specific channel-forming protein, Tsx LI62_RS05225 PF11622 Protein of unknown function (DUF3251) LI62_RS05230 PF03477 ATP cone domain LI62_RS05235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI62_RS05235 PF01872 RibD C-terminal domain LI62_RS05240 PF00885 6,7-dimethyl-8-ribityllumazine synthase LI62_RS05245 PF01029 NusB family LI62_RS05250 PF00586 AIR synthase related protein, N-terminal domain LI62_RS05250 PF02769 AIR synthase related protein, C-terminal domain LI62_RS05255 PF00248 Aldo/keto reductase family LI62_RS05260 PF02779 Transketolase, pyrimidine binding domain LI62_RS05260 PF02780 Transketolase, C-terminal domain LI62_RS05260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LI62_RS05265 PF00348 Polyprenyl synthetase LI62_RS05270 PF02609 Exonuclease VII small subunit LI62_RS05275 PF02568 Thiamine biosynthesis protein (ThiI) LI62_RS05275 PF02926 THUMP domain LI62_RS05280 PF00392 Bacterial regulatory proteins, gntR family LI62_RS05280 PF07702 UTRA domain LI62_RS05285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI62_RS05290 PF02056 Family 4 glycosyl hydrolase LI62_RS05290 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI62_RS05295 PF02378 Phosphotransferase system, EIIC LI62_RS05300 PF01965 DJ-1/PfpI family LI62_RS05305 PF02558 Ketopantoate reductase PanE/ApbA LI62_RS05305 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI62_RS05310 PF04461 Protein of unknown function (DUF520) LI62_RS05315 PF07690 Major Facilitator Superfamily LI62_RS05320 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS05325 PF13377 Periplasmic binding protein-like domain LI62_RS05330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS05330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS05335 PF13407 Periplasmic binding protein domain LI62_RS05340 PF02653 LI62_RS05340 LI62_RS05345 PF00005 ABC transporter LI62_RS05350 PF02952 L-fucose isomerase, C-terminal domain LI62_RS05350 PF07881 L-fucose isomerase, first N-terminal domain LI62_RS05350 PF07882 L-fucose isomerase, second N-terminal domain LI62_RS05355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS05355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS05360 PF05025 RbsD / FucU transport protein family LI62_RS05365 PF01040 UbiA prenyltransferase family LI62_RS05370 PF03626 LI62_RS05370 LI62_RS05375 PF00510 Cytochrome c oxidase subunit III LI62_RS05380 PF00115 Cytochrome C and Quinol oxidase polypeptide I LI62_RS05385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LI62_RS05385 PF06481 COX Aromatic Rich Motif LI62_RS05395 PF07690 Major Facilitator Superfamily LI62_RS05400 PF03923 LI62_RS05400 LI62_RS05400 PF08139 LI62_RS05400 LI62_RS05405 PF01722 BolA-like protein LI62_RS05410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI62_RS05410 PF05697 Bacterial trigger factor protein (TF) LI62_RS05410 PF05698 Bacterial trigger factor protein (TF) C-terminus LI62_RS05415 PF00574 Clp protease LI62_RS05420 PF06689 ClpX C4-type zinc finger LI62_RS05420 PF07724 AAA domain (Cdc48 subfamily) LI62_RS05420 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS05425 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS05425 PF02190 ATP-dependent protease La (LON) domain LI62_RS05425 PF05362 Lon protease (S16) C-terminal proteolytic domain LI62_RS05430 PF00216 Bacterial DNA-binding protein LI62_RS05435 PF13145 PPIC-type PPIASE domain LI62_RS05435 PF13624 SurA N-terminal domain LI62_RS05440 PF12836 Helix-hairpin-helix motif LI62_RS05445 PF03061 Thioesterase superfamily LI62_RS05450 PF06508 Queuosine biosynthesis protein QueC LI62_RS05455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS05455 PF12793 LI62_RS05455 LI62_RS05460 PF08282 haloacid dehalogenase-like hydrolase LI62_RS05465 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS05470 PF01037 AsnC family LI62_RS05470 PF13412 Winged helix-turn-helix DNA-binding LI62_RS05475 PF00005 ABC transporter LI62_RS05475 PF00664 ABC transporter transmembrane region LI62_RS05480 PF00005 ABC transporter LI62_RS05480 PF00664 ABC transporter transmembrane region LI62_RS05485 PF00543 Nitrogen regulatory protein P-II LI62_RS05490 PF00909 Ammonium Transporter Family LI62_RS05495 PF13622 Thioesterase-like superfamily LI62_RS05500 PF09619 Type III secretion system lipoprotein chaperone (YscW) LI62_RS05505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI62_RS05520 PF00155 Aminotransferase class I and II LI62_RS05520 PF00392 Bacterial regulatory proteins, gntR family LI62_RS05530 PF00356 Bacterial regulatory proteins, lacI family LI62_RS05530 PF13377 Periplasmic binding protein-like domain LI62_RS05535 PF00703 Glycosyl hydrolases family 2 LI62_RS05535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LI62_RS05535 PF02837 Glycosyl hydrolases family 2, sugar binding domain LI62_RS05535 PF02929 Beta galactosidase small chain LI62_RS05535 PF16353 LI62_RS05535 LI62_RS05540 PF03824 LI62_RS05540 LI62_RS05545 PF02583 Metal-sensitive transcriptional repressor LI62_RS05550 PF00563 EAL domain LI62_RS05550 PF12792 LI62_RS05550 LI62_RS05555 PF01197 Ribosomal protein L31 LI62_RS05560 PF00444 Ribosomal protein L36 LI62_RS05565 PF13302 Acetyltransferase (GNAT) domain LI62_RS05570 PF00155 Aminotransferase class I and II LI62_RS05570 PF00392 Bacterial regulatory proteins, gntR family LI62_RS05575 PF10777 LI62_RS05575 LI62_RS05580 PF12464 Maltose acetyltransferase LI62_RS05580 PF14602 Hexapeptide repeat of succinyl-transferase LI62_RS05585 PF05321 Haemolysin expression modulating protein LI62_RS05590 PF10757 LI62_RS05590 LI62_RS05595 PF00873 AcrB/AcrD/AcrF family LI62_RS05600 PF00529 HlyD family secretion protein LI62_RS05600 PF16576 LI62_RS05600 LI62_RS05605 PF00440 Bacterial regulatory proteins, tetR family LI62_RS05605 PF08361 MAATS-type transcriptional repressor, C-terminal region LI62_RS05610 PF00924 Mechanosensitive ion channel LI62_RS05610 PF12794 LI62_RS05610 LI62_RS05610 PF12795 LI62_RS05610 LI62_RS05615 PF10689 LI62_RS05615 LI62_RS05620 PF07445 Primosomal replication protein priB and priC LI62_RS05625 PF04304 LI62_RS05625 LI62_RS05630 PF00156 Phosphoribosyl transferase domain LI62_RS05635 PF12168 LI62_RS05635 LI62_RS05635 PF12169 DNA polymerase III subunits gamma and tau domain III LI62_RS05635 PF12170 DNA polymerase III tau subunit V interacting with alpha LI62_RS05635 PF13177 DNA polymerase III, delta subunit LI62_RS05640 PF02575 YbaB/EbfC DNA-binding family LI62_RS05645 PF02132 RecR protein LI62_RS05645 PF13662 Toprim domain LI62_RS05650 PF00183 Hsp90 protein LI62_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS05655 PF00406 Adenylate kinase LI62_RS05655 PF05191 Adenylate kinase, active site lid LI62_RS05660 PF00762 Ferrochelatase LI62_RS05665 PF00294 pfkB family carbohydrate kinase LI62_RS05670 PF00999 Sodium/hydrogen exchanger family LI62_RS05670 PF02254 TrkA-N domain LI62_RS05675 PF07690 Major Facilitator Superfamily LI62_RS05680 PF00149 Calcineurin-like phosphoesterase LI62_RS05680 PF02872 5'-nucleotidase, C-terminal domain LI62_RS05685 PF04073 Aminoacyl-tRNA editing domain LI62_RS05690 PF01963 LI62_RS05690 LI62_RS05695 PF00122 E1-E2 ATPase LI62_RS05695 PF00403 Heavy-metal-associated domain LI62_RS05695 PF00702 haloacid dehalogenase-like hydrolase LI62_RS05700 PF13411 MerR HTH family regulatory protein LI62_RS05705 PF01957 NfeD-like C-terminal, partner-binding LI62_RS05710 PF01145 SPFH domain / Band 7 family LI62_RS05710 PF16200 LI62_RS05710 LI62_RS05720 PF00005 ABC transporter LI62_RS05725 PF03649 LI62_RS05725 LI62_RS05730 PF00085 Thioredoxin LI62_RS05730 PF14559 Tetratricopeptide repeat LI62_RS05730 PF14561 Tetratricopeptide repeat LI62_RS05735 PF00106 short chain dehydrogenase LI62_RS05740 PF13472 GDSL-like Lipase/Acylhydrolase family LI62_RS05745 PF00005 ABC transporter LI62_RS05750 PF02687 LI62_RS05750 LI62_RS05755 PF03797 Autotransporter beta-domain LI62_RS05765 PF02222 ATP-grasp domain LI62_RS05770 PF00731 AIR carboxylase LI62_RS05775 PF00149 Calcineurin-like phosphoesterase LI62_RS05780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI62_RS05785 PF01406 tRNA synthetases class I (C) catalytic domain LI62_RS05785 PF09190 DALR domain LI62_RS05790 PF04307 LI62_RS05790 LI62_RS05795 PF00356 Bacterial regulatory proteins, lacI family LI62_RS05795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS05800 PF00367 phosphotransferase system, EIIB LI62_RS05800 PF02378 Phosphotransferase system, EIIC LI62_RS05805 PF13275 S4 domain LI62_RS05810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LI62_RS05810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LI62_RS05815 PF00419 Fimbrial protein LI62_RS05820 PF00419 Fimbrial protein LI62_RS05825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS05825 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS05830 PF00577 Outer membrane usher protein LI62_RS05830 PF13953 PapC C-terminal domain LI62_RS05830 PF13954 PapC N-terminal domain LI62_RS05835 PF00419 Fimbrial protein LI62_RS05840 PF00419 Fimbrial protein LI62_RS05845 PF00072 Response regulator receiver domain LI62_RS05845 PF00196 Bacterial regulatory proteins, luxR family LI62_RS05855 PF00563 EAL domain LI62_RS05865 PF00589 Phage integrase family LI62_RS05880 PF13973 LI62_RS05880 LI62_RS05890 PF01258 Prokaryotic dksA/traR C4-type zinc finger LI62_RS05905 PF05869 LI62_RS05905 LI62_RS05915 PF09588 YqaJ-like viral recombinase domain LI62_RS05930 PF07358 LI62_RS05930 LI62_RS05950 PF00717 Peptidase S24-like LI62_RS05950 PF01381 Helix-turn-helix LI62_RS05955 PF15943 LI62_RS05955 LI62_RS05960 PF06254 Protein of unknown function (DUF1019) LI62_RS05965 PF04492 LI62_RS05965 LI62_RS05970 PF06992 LI62_RS05970 LI62_RS05975 PF13412 Winged helix-turn-helix DNA-binding LI62_RS05985 PF14359 Domain of unknown function (DUF4406) LI62_RS05990 PF14354 LI62_RS05990 LI62_RS06010 PF06440 DNA polymerase III, theta subunit LI62_RS06020 PF05772 NinB protein LI62_RS06025 PF05322 LI62_RS06025 LI62_RS06030 PF07102 Protein of unknown function (DUF1364) LI62_RS06035 PF05866 Endodeoxyribonuclease RusA LI62_RS06040 PF06323 LI62_RS06040 LI62_RS06050 PF16931 LI62_RS06050 LI62_RS06055 PF05449 LI62_RS06055 LI62_RS06060 PF00959 Phage lysozyme LI62_RS06065 PF10828 LI62_RS06065 LI62_RS06070 PF09669 LI62_RS06070 LI62_RS06085 PF03592 Terminase small subunit LI62_RS06090 PF04466 Phage terminase large subunit LI62_RS06100 PF06381 LI62_RS06100 LI62_RS06105 PF04233 LI62_RS06105 LI62_RS06155 PF02368 Bacterial Ig-like domain (group 2) LI62_RS06165 PF01936 NYN domain LI62_RS06170 PF06120 LI62_RS06170 LI62_RS06190 PF00877 NlpC/P60 family LI62_RS06210 PF00535 Glycosyl transferase family 2 LI62_RS06215 PF04138 LI62_RS06215 LI62_RS06225 PF00817 impB/mucB/samB family LI62_RS06225 PF11799 impB/mucB/samB family C-terminal domain LI62_RS06225 PF13438 LI62_RS06225 LI62_RS06230 PF02586 Uncharacterised ACR, COG2135 LI62_RS06235 PF07338 Protein of unknown function (DUF1471) LI62_RS06240 PF00593 TonB dependent receptor LI62_RS06240 PF07715 TonB-dependent Receptor Plug Domain LI62_RS06245 PF05787 Bacterial protein of unknown function (DUF839) LI62_RS06250 PF00324 Amino acid permease LI62_RS06255 PF03825 LI62_RS06255 LI62_RS06260 PF01261 Xylose isomerase-like TIM barrel LI62_RS06260 PF07582 AP endonuclease family 2 C terminus LI62_RS06265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS06265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI62_RS06270 PF00356 Bacterial regulatory proteins, lacI family LI62_RS06270 PF13377 Periplasmic binding protein-like domain LI62_RS06275 PF00924 Mechanosensitive ion channel LI62_RS06280 PF07690 Major Facilitator Superfamily LI62_RS06285 PF13560 Helix-turn-helix domain LI62_RS06290 PF05973 LI62_RS06290 LI62_RS06295 PF13560 Helix-turn-helix domain LI62_RS06300 PF00881 Nitroreductase family LI62_RS06305 PF04237 YjbR LI62_RS06310 PF00440 Bacterial regulatory proteins, tetR family LI62_RS06315 PF12706 Beta-lactamase superfamily domain LI62_RS06320 PF12833 Helix-turn-helix domain LI62_RS06325 PF00593 TonB dependent receptor LI62_RS06325 PF07715 TonB-dependent Receptor Plug Domain LI62_RS06330 PF00756 Putative esterase LI62_RS06330 PF11806 Domain of unknown function (DUF3327) LI62_RS06335 PF06643 LI62_RS06335 LI62_RS06340 PF00122 E1-E2 ATPase LI62_RS06340 PF00689 Cation transporting ATPase, C-terminus LI62_RS06340 PF00690 Cation transporter/ATPase, N-terminus LI62_RS06340 PF00702 haloacid dehalogenase-like hydrolase LI62_RS06345 PF16576 LI62_RS06345 LI62_RS06350 PF00873 AcrB/AcrD/AcrF family LI62_RS06355 PF04107 Glutamate-cysteine ligase family 2(GCS2) LI62_RS06360 PF02558 Ketopantoate reductase PanE/ApbA LI62_RS06360 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI62_RS06370 PF10908 LI62_RS06370 LI62_RS06375 PF05638 Protein of unknown function (DUF796) LI62_RS06385 PF08546 Ketopantoate reductase PanE/ApbA C terminal LI62_RS06390 PF02677 LI62_RS06390 LI62_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS06395 PF03466 LysR substrate binding domain LI62_RS06400 PF03306 Alpha-acetolactate decarboxylase LI62_RS06405 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS06405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS06405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS06410 PF00106 short chain dehydrogenase LI62_RS06415 PF00313 'Cold-shock' DNA-binding domain LI62_RS06420 PF00005 ABC transporter LI62_RS06425 PF00005 ABC transporter LI62_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS06430 PF12911 LI62_RS06430 LI62_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS06440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS06445 PF13302 Acetyltransferase (GNAT) domain LI62_RS06450 PF00732 GMC oxidoreductase LI62_RS06450 PF05199 GMC oxidoreductase LI62_RS06455 PF00171 Aldehyde dehydrogenase family LI62_RS06460 PF00440 Bacterial regulatory proteins, tetR family LI62_RS06460 PF13977 Bacterial transcriptional repressor LI62_RS06465 PF02028 BCCT family transporter LI62_RS06470 PF06296 LI62_RS06470 LI62_RS06475 PF01381 Helix-turn-helix LI62_RS06480 PF01297 Periplasmic solute binding protein family LI62_RS06485 PF00005 ABC transporter LI62_RS06490 PF00950 LI62_RS06490 LI62_RS06495 PF00950 LI62_RS06495 LI62_RS06500 PF01648 4'-phosphopantetheinyl transferase superfamily LI62_RS06505 PF00593 TonB dependent receptor LI62_RS06505 PF07715 TonB-dependent Receptor Plug Domain LI62_RS06510 PF00756 Putative esterase LI62_RS06510 PF11806 Domain of unknown function (DUF3327) LI62_RS06515 PF03621 MbtH-like protein LI62_RS06520 PF00501 AMP-binding enzyme LI62_RS06520 PF00550 Phosphopantetheine attachment site LI62_RS06520 PF00668 Condensation domain LI62_RS06520 PF00975 Thioesterase domain LI62_RS06525 PF00005 ABC transporter LI62_RS06530 PF01032 FecCD transport family LI62_RS06535 PF01032 FecCD transport family LI62_RS06540 PF05977 Transmembrane secretion effector LI62_RS06545 PF01497 Periplasmic binding protein LI62_RS06550 PF00425 chorismate binding enzyme LI62_RS06555 PF00501 AMP-binding enzyme LI62_RS06555 PF13193 AMP-binding enzyme C-terminal domain LI62_RS06560 PF00550 Phosphopantetheine attachment site LI62_RS06560 PF00857 Isochorismatase family LI62_RS06565 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS06570 PF03061 Thioesterase superfamily LI62_RS06575 PF02554 LI62_RS06575 LI62_RS06575 PF13722 LI62_RS06575 LI62_RS06580 PF04328 LI62_RS06580 LI62_RS06585 PF01381 Helix-turn-helix LI62_RS06590 PF05016 Plasmid stabilisation system protein LI62_RS06595 PF00465 Iron-containing alcohol dehydrogenase LI62_RS06600 PF00005 ABC transporter LI62_RS06605 PF02653 LI62_RS06605 LI62_RS06610 PF13407 Periplasmic binding protein domain LI62_RS06620 PF01636 Phosphotransferase enzyme family LI62_RS06625 PF01008 Initiation factor 2 subunit family LI62_RS06630 PF03079 ARD/ARD' family LI62_RS06635 PF00702 haloacid dehalogenase-like hydrolase LI62_RS06640 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS06645 PF00155 Aminotransferase class I and II LI62_RS06655 PF01507 Phosphoadenosine phosphosulfate reductase family LI62_RS06655 PF11922 LI62_RS06655 LI62_RS06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS06660 PF03466 LysR substrate binding domain LI62_RS06665 PF00578 AhpC/TSA family LI62_RS06665 PF10417 C-terminal domain of 1-Cys peroxiredoxin LI62_RS06670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS06670 PF13192 Thioredoxin domain LI62_RS06675 PF00582 Universal stress protein family LI62_RS06680 PF00107 Zinc-binding dehydrogenase LI62_RS06680 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS06680 PF13823 Alcohol dehydrogenase GroES-associated LI62_RS06685 PF01272 Transcription elongation factor, GreA/GreB, C-term LI62_RS06685 PF14760 Rnk N-terminus LI62_RS06690 PF01613 Flavin reductase like domain LI62_RS06695 PF12833 Helix-turn-helix domain LI62_RS06700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS06700 PF00381 PTS HPr component phosphorylation site LI62_RS06700 PF00391 PEP-utilising enzyme, mobile domain LI62_RS06700 PF02896 PEP-utilising enzyme, TIM barrel domain LI62_RS06700 PF05524 PEP-utilising enzyme, N-terminal LI62_RS06705 PF05343 M42 glutamyl aminopeptidase LI62_RS06710 PF00557 Metallopeptidase family M24 LI62_RS06710 PF01321 Creatinase/Prolidase N-terminal domain LI62_RS06715 PF02378 Phosphotransferase system, EIIC LI62_RS06720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS06725 PF00445 Ribonuclease T2 family LI62_RS06730 PF03606 LI62_RS06730 LI62_RS06745 PF02321 Outer membrane efflux protein LI62_RS06750 PF16576 LI62_RS06750 LI62_RS06755 PF00873 AcrB/AcrD/AcrF family LI62_RS06760 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LI62_RS06765 PF00313 'Cold-shock' DNA-binding domain LI62_RS06770 PF02537 LI62_RS06770 LI62_RS06775 PF00795 Carbon-nitrogen hydrolase LI62_RS06780 PF02416 mttA/Hcf106 family LI62_RS06785 PF04055 Radical SAM superfamily LI62_RS06785 PF16881 LI62_RS06785 LI62_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS06790 PF03466 LysR substrate binding domain LI62_RS06795 PF03099 Biotin/lipoate A/B protein ligase family LI62_RS06800 PF04359 Protein of unknown function (DUF493) LI62_RS06805 PF00768 D-alanyl-D-alanine carboxypeptidase LI62_RS06805 PF07943 Penicillin-binding protein 5, C-terminal domain LI62_RS06810 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel LI62_RS06810 PF05036 Sporulation related domain LI62_RS06815 PF01098 LI62_RS06815 LI62_RS06820 PF00905 Penicillin binding protein transpeptidase domain LI62_RS06820 PF03717 Penicillin-binding Protein dimerisation domain LI62_RS06825 PF02590 Predicted SPOUT methyltransferase LI62_RS06830 PF02410 Oligomerisation domain LI62_RS06835 PF01467 Cytidylyltransferase LI62_RS06840 PF06144 DNA polymerase III, delta subunit LI62_RS06840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LI62_RS06845 PF04390 Lipopolysaccharide-assembly LI62_RS06850 PF00133 tRNA synthetases class I (I, L, M and V) LI62_RS06850 PF08264 Anticodon-binding domain of tRNA LI62_RS06850 PF13603 Leucyl-tRNA synthetase, Domain 2 LI62_RS06855 PF07295 LI62_RS06855 LI62_RS06860 PF01156 Inosine-uridine preferring nucleoside hydrolase LI62_RS06865 PF00005 ABC transporter LI62_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS06880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS06885 PF00795 Carbon-nitrogen hydrolase LI62_RS06890 PF00571 CBS domain LI62_RS06890 PF03471 Transporter associated domain LI62_RS06895 PF02130 Uncharacterized protein family UPF0054 LI62_RS06900 PF02562 PhoH-like protein LI62_RS06905 PF00919 Uncharacterized protein family UPF0004 LI62_RS06905 PF01938 TRAM domain LI62_RS06905 PF04055 Radical SAM superfamily LI62_RS06910 PF01494 FAD binding domain LI62_RS06955 PF00733 Asparagine synthase LI62_RS06955 PF13537 Glutamine amidotransferase domain LI62_RS06960 PF13242 HAD-hyrolase-like LI62_RS06960 PF13344 Haloacid dehalogenase-like hydrolase LI62_RS06965 PF00480 ROK family LI62_RS06965 PF01047 MarR family LI62_RS06970 PF01979 Amidohydrolase family LI62_RS06975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LI62_RS06980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI62_RS06980 PF00367 phosphotransferase system, EIIB LI62_RS06980 PF02378 Phosphotransferase system, EIIC LI62_RS06985 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI62_RS06985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LI62_RS06990 PF03573 outer membrane porin, OprD family LI62_RS06995 PF13982 LI62_RS06995 LI62_RS07000 PF01475 Ferric uptake regulator family LI62_RS07005 PF00258 Flavodoxin LI62_RS07010 PF01402 Ribbon-helix-helix protein, copG family LI62_RS07015 PF12697 Alpha/beta hydrolase family LI62_RS07020 PF03925 SeqA protein LI62_RS07025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI62_RS07025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI62_RS07025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI62_RS07025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI62_RS07030 PF13520 Amino acid permease LI62_RS07035 PF01276 Orn/Lys/Arg decarboxylase, major domain LI62_RS07035 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI62_RS07035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI62_RS07040 PF00072 Response regulator receiver domain LI62_RS07040 PF00486 Transcriptional regulatory protein, C terminal LI62_RS07045 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS07045 PF00582 Universal stress protein family LI62_RS07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS07045 PF02702 Osmosensitive K+ channel His kinase sensor domain LI62_RS07045 PF13493 Domain of unknown function (DUF4118) LI62_RS07050 PF02669 LI62_RS07050 LI62_RS07055 PF00122 E1-E2 ATPase LI62_RS07055 PF00702 haloacid dehalogenase-like hydrolase LI62_RS07060 PF03814 LI62_RS07060 LI62_RS07065 PF09604 LI62_RS07065 LI62_RS07070 PF10725 LI62_RS07070 LI62_RS07075 PF00875 DNA photolyase LI62_RS07075 PF03441 FAD binding domain of DNA photolyase LI62_RS07080 PF01784 NIF3 (NGG1p interacting factor 3) LI62_RS07085 PF02682 Allophanate hydrolase subunit 1 LI62_RS07090 PF02626 Allophanate hydrolase subunit 2 LI62_RS07095 PF03746 LamB/YcsF family LI62_RS07100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LI62_RS07100 PF06827 Zinc finger found in FPG and IleRS LI62_RS07100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LI62_RS07105 PF00285 Citrate synthase LI62_RS07110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LI62_RS07120 PF00890 FAD binding domain LI62_RS07120 PF02910 Fumarate reductase flavoprotein C-term LI62_RS07125 PF13085 2Fe-2S iron-sulfur cluster binding domain LI62_RS07125 PF13534 4Fe-4S dicluster domain LI62_RS07130 PF00676 Dehydrogenase E1 component LI62_RS07130 PF02779 Transketolase, pyrimidine binding domain LI62_RS07130 PF16078 LI62_RS07130 LI62_RS07130 PF16870 LI62_RS07130 LI62_RS07135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LI62_RS07135 PF00364 Biotin-requiring enzyme LI62_RS07135 PF02817 e3 binding domain LI62_RS07140 PF00549 CoA-ligase LI62_RS07140 PF08442 ATP-grasp domain LI62_RS07145 PF00549 CoA-ligase LI62_RS07145 PF02629 CoA binding domain LI62_RS07150 PF00392 Bacterial regulatory proteins, gntR family LI62_RS07150 PF07702 UTRA domain LI62_RS07155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS07155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS07160 PF01074 Glycosyl hydrolases family 38 N-terminal domain LI62_RS07160 PF07748 Glycosyl hydrolases family 38 C-terminal domain LI62_RS07160 PF09261 Alpha mannosidase, middle domain LI62_RS07165 PF01654 LI62_RS07165 LI62_RS07170 PF02322 LI62_RS07170 LI62_RS07175 PF08173 LI62_RS07175 LI62_RS07180 PF09600 LI62_RS07180 LI62_RS07185 PF03061 Thioesterase superfamily LI62_RS07190 PF01618 LI62_RS07190 LI62_RS07195 PF02472 Biopolymer transport protein ExbD/TolR LI62_RS07200 PF06519 TolA C-terminal LI62_RS07205 PF04052 TolB amino-terminal domain LI62_RS07205 PF07676 WD40-like Beta Propeller Repeat LI62_RS07210 PF00691 OmpA family LI62_RS07215 PF13174 Tetratricopeptide repeat LI62_RS07215 PF13432 Tetratricopeptide repeat LI62_RS07215 PF16331 LI62_RS07215 LI62_RS07245 PF02445 Quinolinate synthetase A protein LI62_RS07250 PF04973 LI62_RS07250 LI62_RS07255 PF01545 Cation efflux family LI62_RS07260 PF13985 LI62_RS07260 LI62_RS07265 PF00793 DAHP synthetase I family LI62_RS07270 PF00300 Histidine phosphatase superfamily (branch 1) LI62_RS07275 PF01263 Aldose 1-epimerase LI62_RS07280 PF00288 GHMP kinases N terminal domain LI62_RS07280 PF08544 GHMP kinases C terminal LI62_RS07280 PF10509 Galactokinase galactose-binding signature LI62_RS07285 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LI62_RS07285 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LI62_RS07290 PF16363 LI62_RS07290 LI62_RS07295 PF00005 ABC transporter LI62_RS07300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS07300 PF03459 TOBE domain LI62_RS07305 PF10766 Protein of unknown function (DUF2592) LI62_RS07310 PF13531 Bacterial extracellular solute-binding protein LI62_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07320 PF00005 ABC transporter LI62_RS07320 PF03459 TOBE domain LI62_RS07325 PF08282 haloacid dehalogenase-like hydrolase LI62_RS07330 PF10282 Lactonase, 7-bladed beta-propeller LI62_RS07335 PF01095 Pectinesterase LI62_RS07340 PF01979 Amidohydrolase family LI62_RS07345 PF00491 Arginase family LI62_RS07350 PF00392 Bacterial regulatory proteins, gntR family LI62_RS07350 PF07702 UTRA domain LI62_RS07355 PF01175 Urocanase LI62_RS07360 PF00221 Aromatic amino acid lyase LI62_RS07365 PF01161 Phosphatidylethanolamine-binding protein LI62_RS07370 PF00202 Aminotransferase class-III LI62_RS07375 PF04055 Radical SAM superfamily LI62_RS07375 PF06968 Biotin and Thiamin Synthesis associated domain LI62_RS07380 PF00155 Aminotransferase class I and II LI62_RS07385 PF08241 Methyltransferase domain LI62_RS07390 PF13500 AAA domain LI62_RS07395 PF00005 ABC transporter LI62_RS07400 PF00271 Helicase conserved C-terminal domain LI62_RS07400 PF02151 UvrB/uvrC motif LI62_RS07400 PF04851 Type III restriction enzyme, res subunit LI62_RS07400 PF12344 Ultra-violet resistance protein B LI62_RS07405 PF01933 Uncharacterised protein family UPF0052 LI62_RS07410 PF04055 Radical SAM superfamily LI62_RS07410 PF06463 Molybdenum Cofactor Synthesis C LI62_RS07410 PF13353 4Fe-4S single cluster domain LI62_RS07415 PF00994 Probable molybdopterin binding domain LI62_RS07420 PF01967 MoaC family LI62_RS07425 PF02597 ThiS family LI62_RS07430 PF02391 MoaE protein LI62_RS07435 PF01027 Inhibitor of apoptosis-promoting Bax1 LI62_RS07440 PF03706 LI62_RS07440 LI62_RS07445 PF13091 PLD-like domain LI62_RS07450 PF03372 Endonuclease/Exonuclease/phosphatase family LI62_RS07455 PF11076 LI62_RS07455 LI62_RS07460 PF12698 ABC-2 family transporter protein LI62_RS07465 PF12698 ABC-2 family transporter protein LI62_RS07470 PF00005 ABC transporter LI62_RS07475 PF16576 LI62_RS07475 LI62_RS07480 PF00440 Bacterial regulatory proteins, tetR family LI62_RS07480 PF09209 Domain of unknown function (DUF1956) LI62_RS07485 PF00270 DEAD/DEAH box helicase LI62_RS07485 PF00271 Helicase conserved C-terminal domain LI62_RS07490 PF00270 DEAD/DEAH box helicase LI62_RS07490 PF06733 DEAD_2 LI62_RS07490 PF13307 Helicase C-terminal domain LI62_RS07495 PF00419 Fimbrial protein LI62_RS07500 PF00419 Fimbrial protein LI62_RS07505 PF00577 Outer membrane usher protein LI62_RS07505 PF13953 PapC C-terminal domain LI62_RS07505 PF13954 PapC N-terminal domain LI62_RS07510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS07510 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS07515 PF00419 Fimbrial protein LI62_RS07520 PF02885 Glycosyl transferase family, helical bundle domain LI62_RS07525 PF07338 Protein of unknown function (DUF1471) LI62_RS07530 PF01258 Prokaryotic dksA/traR C4-type zinc finger LI62_RS07535 PF07338 Protein of unknown function (DUF1471) LI62_RS07545 PF05971 Protein of unknown function (DUF890) LI62_RS07550 PF00924 Mechanosensitive ion channel LI62_RS07555 PF00005 ABC transporter LI62_RS07560 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07565 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS07570 PF00210 Ferritin-like domain LI62_RS07575 PF00892 EamA-like transporter family LI62_RS07580 PF13505 Outer membrane protein beta-barrel domain LI62_RS07585 PF00884 Sulfatase LI62_RS07595 PF01325 Iron dependent repressor, N-terminal DNA binding domain LI62_RS07595 PF02742 Iron dependent repressor, metal binding and dimerisation domain LI62_RS07600 PF03600 Citrate transporter LI62_RS07605 PF13533 Biotin-lipoyl like LI62_RS07605 PF16576 LI62_RS07605 LI62_RS07610 PF07690 Major Facilitator Superfamily LI62_RS07615 PF02321 Outer membrane efflux protein LI62_RS07620 PF00248 Aldo/keto reductase family LI62_RS07625 PF00593 TonB dependent receptor LI62_RS07625 PF07715 TonB-dependent Receptor Plug Domain LI62_RS07630 PF00756 Putative esterase LI62_RS07635 PF00756 Putative esterase LI62_RS07635 PF11806 Domain of unknown function (DUF3327) LI62_RS07640 PF00005 ABC transporter LI62_RS07640 PF00664 ABC transporter transmembrane region LI62_RS07645 PF06722 Protein of unknown function (DUF1205) LI62_RS07650 PF16576 LI62_RS07650 LI62_RS07655 PF00005 ABC transporter LI62_RS07655 PF02687 LI62_RS07655 LI62_RS07655 PF12704 MacB-like periplasmic core domain LI62_RS07660 PF02321 Outer membrane efflux protein LI62_RS07665 PF00232 Glycosyl hydrolase family 1 LI62_RS07670 PF02378 Phosphotransferase system, EIIC LI62_RS07675 PF00392 Bacterial regulatory proteins, gntR family LI62_RS07675 PF07702 UTRA domain LI62_RS07680 PF03734 L,D-transpeptidase catalytic domain LI62_RS07685 PF00005 ABC transporter LI62_RS07685 PF12848 ABC transporter LI62_RS07690 PF01055 Glycosyl hydrolases family 31 LI62_RS07690 PF13802 Galactose mutarotase-like LI62_RS07690 PF17137 LI62_RS07690 LI62_RS07695 PF07690 Major Facilitator Superfamily LI62_RS07700 PF00356 Bacterial regulatory proteins, lacI family LI62_RS07700 PF13377 Periplasmic binding protein-like domain LI62_RS07705 PF07350 Protein of unknown function (DUF1479) LI62_RS07710 PF08282 haloacid dehalogenase-like hydrolase LI62_RS07715 PF01228 Glycine radical LI62_RS07715 PF02901 Pyruvate formate lyase LI62_RS07720 PF04055 Radical SAM superfamily LI62_RS07720 PF13353 4Fe-4S single cluster domain LI62_RS07725 PF00923 Transaldolase LI62_RS07730 PF00899 ThiF family LI62_RS07735 PF00994 Probable molybdopterin binding domain LI62_RS07735 PF03453 MoeA N-terminal region (domain I and II) LI62_RS07735 PF03454 MoeA C-terminal region (domain IV) LI62_RS07740 PF01112 Asparaginase LI62_RS07745 PF00005 ABC transporter LI62_RS07745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS07750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS07755 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07760 PF12911 LI62_RS07760 LI62_RS07765 PF00919 Uncharacterized protein family UPF0004 LI62_RS07765 PF04055 Radical SAM superfamily LI62_RS07770 PF10799 LI62_RS07770 LI62_RS07775 PF07995 Glucose / Sorbosone dehydrogenase LI62_RS07780 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS07780 PF13417 Glutathione S-transferase, N-terminal domain LI62_RS07785 PF00768 D-alanyl-D-alanine carboxypeptidase LI62_RS07785 PF07943 Penicillin-binding protein 5, C-terminal domain LI62_RS07790 PF00455 LI62_RS07790 LI62_RS07790 PF08220 DeoR-like helix-turn-helix domain LI62_RS07795 PF01569 PAP2 superfamily LI62_RS07800 PF01569 PAP2 superfamily LI62_RS07810 PF08282 haloacid dehalogenase-like hydrolase LI62_RS07815 PF07690 Major Facilitator Superfamily LI62_RS07820 PF00440 Bacterial regulatory proteins, tetR family LI62_RS07825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI62_RS07825 PF03960 ArsC family LI62_RS07830 PF02040 LI62_RS07830 LI62_RS07835 PF01022 Bacterial regulatory protein, arsR family LI62_RS07840 PF05638 Protein of unknown function (DUF796) LI62_RS07850 PF02080 TrkA-C domain LI62_RS07850 PF06826 LI62_RS07850 LI62_RS07855 PF11045 LI62_RS07855 LI62_RS07860 PF00462 Glutaredoxin LI62_RS07865 PF00881 Nitroreductase family LI62_RS07870 PF08443 RimK-like ATP-grasp domain LI62_RS07875 PF10722 Putative bacterial sensory transduction regulator LI62_RS07880 PF13416 Bacterial extracellular solute-binding protein LI62_RS07885 PF00005 ABC transporter LI62_RS07885 PF08402 TOBE domain LI62_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07900 PF10767 LI62_RS07900 LI62_RS07905 PF05958 tRNA (Uracil-5-)-methyltransferase LI62_RS07915 PF00072 Response regulator receiver domain LI62_RS07915 PF00486 Transcriptional regulatory protein, C terminal LI62_RS07920 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS07925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS07940 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS07945 PF00005 ABC transporter LI62_RS07950 PF12883 Protein of unknown function (DUF3828) LI62_RS07955 PF01906 Putative heavy-metal-binding LI62_RS07960 PF01510 N-acetylmuramoyl-L-alanine amidase LI62_RS07965 PF15977 LI62_RS07965 LI62_RS07980 PF11356 Type IV pilus biogenesis LI62_RS07985 PF00263 LI62_RS07985 LI62_RS07985 PF03958 Bacterial type II/III secretion system short domain LI62_RS07990 PF00437 Type II/IV secretion system protein LI62_RS07995 PF00482 Type II secretion system (T2SS), protein F LI62_RS08000 PF08334 Type II secretion system (T2SS), protein G LI62_RS08000 PF13544 LI62_RS08000 LI62_RS08005 PF12019 Type II transport protein GspH LI62_RS08005 PF13544 LI62_RS08005 LI62_RS08010 PF02501 Type II secretion system (T2SS), protein I LI62_RS08010 PF13633 Prokaryotic N-terminal methylation site LI62_RS08015 PF11612 Type II secretion system (T2SS), protein J LI62_RS08015 PF13633 Prokaryotic N-terminal methylation site LI62_RS08020 PF03934 Type II secretion system (T2SS), protein K LI62_RS08025 PF05134 Type II secretion system (T2SS), protein L LI62_RS08025 PF12693 GspL periplasmic domain LI62_RS08030 PF04612 Type II secretion system (T2SS), protein M LI62_RS08035 PF01478 Type IV leader peptidase family LI62_RS08035 PF06750 LI62_RS08035 LI62_RS08040 PF00704 Glycosyl hydrolases family 18 LI62_RS08040 PF02010 LI62_RS08040 LI62_RS08040 PF02839 Carbohydrate binding domain LI62_RS08040 PF08329 Chitinase A, N-terminal domain LI62_RS08045 PF01464 Transglycosylase SLT domain LI62_RS08050 PF00182 Chitinase class I LI62_RS08050 PF00801 PKD domain LI62_RS08050 PF02839 Carbohydrate binding domain LI62_RS08055 PF01370 NAD dependent epimerase/dehydratase family LI62_RS08060 PF11066 LI62_RS08060 LI62_RS08060 PF13460 NADH(P)-binding LI62_RS08065 PF01212 Beta-eliminating lyase LI62_RS08070 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS08070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS08070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS08075 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS08075 PF00175 Oxidoreductase NAD-binding domain LI62_RS08075 PF00970 Oxidoreductase FAD-binding domain LI62_RS08080 PF03063 Prismane/CO dehydrogenase family LI62_RS08085 PF03956 LI62_RS08085 LI62_RS08090 PF00230 Major intrinsic protein LI62_RS08095 PF11398 Protein of unknown function (DUF2813) LI62_RS08100 PF04393 LI62_RS08100 LI62_RS08105 PF16576 LI62_RS08105 LI62_RS08110 PF00005 ABC transporter LI62_RS08110 PF02687 LI62_RS08110 LI62_RS08110 PF12704 MacB-like periplasmic core domain LI62_RS08115 PF00313 'Cold-shock' DNA-binding domain LI62_RS08120 PF02617 ATP-dependent Clp protease adaptor protein ClpS LI62_RS08125 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS08125 PF02861 Clp amino terminal domain LI62_RS08125 PF07724 AAA domain (Cdc48 subfamily) LI62_RS08125 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS08130 PF01176 Translation initiation factor 1A / IF-1 LI62_RS08135 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LI62_RS08140 PF00005 ABC transporter LI62_RS08140 PF00664 ABC transporter transmembrane region LI62_RS08145 PF00005 ABC transporter LI62_RS08145 PF00664 ABC transporter transmembrane region LI62_RS08150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS08155 PF01037 AsnC family LI62_RS08155 PF13412 Winged helix-turn-helix DNA-binding LI62_RS08160 PF01580 FtsK/SpoIIIE family LI62_RS08160 PF09397 Ftsk gamma domain LI62_RS08160 PF13491 LI62_RS08160 LI62_RS08165 PF03548 Outer membrane lipoprotein carrier protein LolA LI62_RS08170 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS08170 PF12002 MgsA AAA+ ATPase C terminal LI62_RS08170 PF16193 LI62_RS08170 LI62_RS08175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI62_RS08175 PF02403 Seryl-tRNA synthetase N-terminal domain LI62_RS08180 PF00384 Molybdopterin oxidoreductase LI62_RS08180 PF01568 Molydopterin dinucleotide binding domain LI62_RS08180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS08185 PF12800 4Fe-4S binding domain LI62_RS08185 PF13247 4Fe-4S dicluster domain LI62_RS08190 PF04976 LI62_RS08190 LI62_RS08195 PF07690 Major Facilitator Superfamily LI62_RS08205 PF04055 Radical SAM superfamily LI62_RS08205 PF13353 4Fe-4S single cluster domain LI62_RS08210 PF01228 Glycine radical LI62_RS08210 PF02901 Pyruvate formate lyase LI62_RS08215 PF01226 Formate/nitrite transporter LI62_RS08220 PF02624 YcaO-like family LI62_RS08225 PF04239 Protein of unknown function (DUF421) LI62_RS08230 PF00266 Aminotransferase class-V LI62_RS08235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI62_RS08240 PF02224 Cytidylate kinase LI62_RS08245 PF00575 S1 RNA binding domain LI62_RS08250 PF00216 Bacterial DNA-binding protein LI62_RS08255 PF00753 Metallo-beta-lactamase superfamily LI62_RS08255 PF03772 LI62_RS08255 LI62_RS08260 PF00005 ABC transporter LI62_RS08260 PF00664 ABC transporter transmembrane region LI62_RS08265 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LI62_RS08270 PF06224 LI62_RS08270 LI62_RS08275 PF03966 Trm112p-like protein LI62_RS08280 PF02348 Cytidylyltransferase LI62_RS08285 PF01636 Phosphotransferase enzyme family LI62_RS08290 PF02698 DUF218 domain LI62_RS08295 PF13649 Methyltransferase domain LI62_RS08300 PF03882 KicB killing factor LI62_RS08300 PF17192 LI62_RS08300 LI62_RS08300 PF17193 LI62_RS08300 LI62_RS08305 PF04288 MukE-like family LI62_RS08310 PF04310 MukB N-terminal LI62_RS08310 PF13558 Putative exonuclease SbcCD, C subunit LI62_RS08310 PF16330 LI62_RS08310 LI62_RS08315 PF01471 Putative peptidoglycan binding domain LI62_RS08315 PF03734 L,D-transpeptidase catalytic domain LI62_RS08320 PF05951 LI62_RS08320 LI62_RS08325 PF00753 Metallo-beta-lactamase superfamily LI62_RS08330 PF00155 Aminotransferase class I and II LI62_RS08335 PF00267 Gram-negative porin LI62_RS08340 PF00152 tRNA synthetases class II (D, K and N) LI62_RS08340 PF01336 OB-fold nucleic acid binding domain LI62_RS08345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LI62_RS08350 PF01433 Peptidase family M1 LI62_RS08350 PF11940 Domain of unknown function (DUF3458) LI62_RS08355 PF00005 ABC transporter LI62_RS08360 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS08365 PF00296 Luciferase-like monooxygenase LI62_RS08370 PF09084 NMT1/THI5 like LI62_RS08375 PF03358 NADPH-dependent FMN reductase LI62_RS08380 PF01180 Dihydroorotate dehydrogenase LI62_RS08385 PF07126 LI62_RS08385 LI62_RS08390 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS08390 PF03473 MOSC domain LI62_RS08390 PF03476 MOSC N-terminal beta barrel domain LI62_RS08395 PF01170 Putative RNA methylase family UPF0020 LI62_RS08395 PF02926 THUMP domain LI62_RS08395 PF10672 S-adenosylmethionine-dependent methyltransferase LI62_RS08400 PF00005 ABC transporter LI62_RS08400 PF12848 ABC transporter LI62_RS08400 PF16326 LI62_RS08400 LI62_RS08405 PF04403 LI62_RS08405 LI62_RS08410 PF02470 LI62_RS08410 LI62_RS08415 PF03886 Protein of unknown function (DUF330) LI62_RS08420 PF04957 Ribosome modulation factor LI62_RS08425 PF07977 FabA-like domain LI62_RS08430 PF05362 Lon protease (S16) C-terminal proteolytic domain LI62_RS08430 PF13654 AAA domain LI62_RS08435 PF06303 Organiser of macrodomain of Terminus of chromosome LI62_RS08440 PF00691 OmpA family LI62_RS08440 PF01389 OmpA-like transmembrane domain LI62_RS08445 PF03846 Cell division inhibitor SulA LI62_RS08450 PF04993 TfoX N-terminal domain LI62_RS08450 PF04994 TfoX C-terminal domain LI62_RS08455 PF12805 LI62_RS08455 LI62_RS08455 PF13515 LI62_RS08455 LI62_RS08460 PF03733 LI62_RS08460 LI62_RS08465 PF00580 UvrD/REP helicase N-terminal domain LI62_RS08465 PF12462 LI62_RS08465 LI62_RS08465 PF13361 UvrD-like helicase C-terminal domain LI62_RS08470 PF02142 MGS-like domain LI62_RS08475 PF09829 LI62_RS08475 LI62_RS08480 PF13380 CoA binding domain LI62_RS08485 PF08755 Hemimethylated DNA-binding protein YccV like LI62_RS08490 PF10672 S-adenosylmethionine-dependent methyltransferase LI62_RS08495 PF00708 Acylphosphatase LI62_RS08500 PF04358 DsrC like protein LI62_RS08505 PF01027 Inhibitor of apoptosis-promoting Bax1 LI62_RS08510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS08520 PF00005 ABC transporter LI62_RS08525 PF01032 FecCD transport family LI62_RS08530 PF01497 Periplasmic binding protein LI62_RS08535 PF00924 Mechanosensitive ion channel LI62_RS08540 PF00196 Bacterial regulatory proteins, luxR family LI62_RS08550 PF00571 CBS domain LI62_RS08550 PF01769 Divalent cation transporter LI62_RS08555 PF09335 LI62_RS08555 LI62_RS08560 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS08565 PF01638 HxlR-like helix-turn-helix LI62_RS08575 PF00328 Histidine phosphatase superfamily (branch 2) LI62_RS08580 PF05954 Phage late control gene D protein (GPD) LI62_RS08580 PF10106 LI62_RS08580 LI62_RS08580 PF13296 LI62_RS08580 LI62_RS08595 PF13993 LI62_RS08595 LI62_RS08600 PF03358 NADPH-dependent FMN reductase LI62_RS08605 PF10685 LI62_RS08605 LI62_RS08610 PF00892 EamA-like transporter family LI62_RS08615 PF08681 Protein of unknown function (DUF1778) LI62_RS08620 PF00583 Acetyltransferase (GNAT) family LI62_RS08625 PF00860 Permease family LI62_RS08630 PF01613 Flavin reductase like domain LI62_RS08635 PF00881 Nitroreductase family LI62_RS08640 PF12697 Alpha/beta hydrolase family LI62_RS08645 PF01042 Endoribonuclease L-PSP LI62_RS08650 PF00857 Isochorismatase family LI62_RS08655 PF00296 Luciferase-like monooxygenase LI62_RS08660 PF00440 Bacterial regulatory proteins, tetR family LI62_RS08660 PF08362 YcdC-like protein, C-terminal region LI62_RS08665 PF07007 Protein of unknown function (DUF1311) LI62_RS08670 PF00171 Aldehyde dehydrogenase family LI62_RS08670 PF01619 Proline dehydrogenase LI62_RS08670 PF14850 DNA-binding domain of Proline dehydrogenase LI62_RS08675 PF00474 Sodium:solute symporter family LI62_RS08680 PF12098 LI62_RS08680 LI62_RS08685 PF01773 Na+ dependent nucleoside transporter N-terminus LI62_RS08685 PF07662 Na+ dependent nucleoside transporter C-terminus LI62_RS08685 PF07670 Nucleoside recognition LI62_RS08690 PF03239 LI62_RS08690 LI62_RS08695 PF09375 Imelysin LI62_RS08695 PF13473 Cupredoxin-like domain LI62_RS08700 PF04261 Dyp-type peroxidase family LI62_RS08705 PF02562 PhoH-like protein LI62_RS08710 PF01235 LI62_RS08710 LI62_RS08720 PF00857 Isochorismatase family LI62_RS08725 PF02678 Pirin LI62_RS08725 PF05726 Pirin C-terminal cupin domain LI62_RS08730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS08730 PF03466 LysR substrate binding domain LI62_RS08740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI62_RS08745 PF02811 PHP domain LI62_RS08750 PF02613 Nitrate reductase delta subunit LI62_RS08755 PF06496 LI62_RS08755 LI62_RS08760 PF03783 Curli production assembly/transport component CsgG LI62_RS08765 PF10614 LI62_RS08765 LI62_RS08770 PF10627 LI62_RS08770 LI62_RS08775 PF00196 Bacterial regulatory proteins, luxR family LI62_RS08780 PF07012 LI62_RS08780 LI62_RS08785 PF07012 LI62_RS08785 LI62_RS08790 PF10610 Thin aggregative fimbriae synthesis protein LI62_RS08800 PF01661 Macro domain LI62_RS08805 PF01757 LI62_RS08805 LI62_RS08810 PF04349 Periplasmic glucan biosynthesis protein, MdoG LI62_RS08815 PF00535 Glycosyl transferase family 2 LI62_RS08820 PF07119 LI62_RS08820 LI62_RS08825 PF13984 LI62_RS08825 LI62_RS08830 PF07690 Major Facilitator Superfamily LI62_RS08835 PF03279 LI62_RS08835 LI62_RS08840 PF00581 Rhodanese-like domain LI62_RS08840 PF12368 LI62_RS08840 LI62_RS08845 PF04264 YceI-like domain LI62_RS08850 PF01292 Prokaryotic cytochrome b561 LI62_RS08855 PF10968 LI62_RS08855 LI62_RS08860 PF01266 FAD dependent oxidoreductase LI62_RS08865 PF13991 LI62_RS08865 LI62_RS08870 PF06183 DinI-like family LI62_RS08875 PF01979 Amidohydrolase family LI62_RS08880 PF07273 Protein of unknown function (DUF1439) LI62_RS08885 PF07690 Major Facilitator Superfamily LI62_RS08890 PF13302 Acetyltransferase (GNAT) domain LI62_RS08895 PF04337 Protein of unknown function, DUF480 LI62_RS08900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS08905 PF03023 LI62_RS08905 LI62_RS08910 PF05130 FlgN protein LI62_RS08915 PF04316 Anti-sigma-28 factor, FlgM LI62_RS08920 PF13144 SAF-like LI62_RS08925 PF00460 Flagella basal body rod protein LI62_RS08930 PF00460 Flagella basal body rod protein LI62_RS08930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS08935 PF03963 LI62_RS08935 LI62_RS08935 PF13860 FlgD Ig-like domain LI62_RS08935 PF13861 FlgD Tudor-like domain LI62_RS08940 PF00460 Flagella basal body rod protein LI62_RS08940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS08940 PF07559 Flagellar basal body protein FlaE LI62_RS08945 PF00460 Flagella basal body rod protein LI62_RS08945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS08950 PF00460 Flagella basal body rod protein LI62_RS08950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS08955 PF02107 LI62_RS08955 LI62_RS08960 PF02119 LI62_RS08960 LI62_RS08965 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LI62_RS08965 PF10135 LI62_RS08965 LI62_RS08970 PF00460 Flagella basal body rod protein LI62_RS08970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS08975 PF00669 Bacterial flagellin N-terminal helical region LI62_RS08980 PF07690 Major Facilitator Superfamily LI62_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS08985 PF03466 LysR substrate binding domain LI62_RS08990 PF00575 S1 RNA binding domain LI62_RS08990 PF10150 Ribonuclease E/G family LI62_RS08990 PF12111 Polyribonucleotide phosphorylase C terminal LI62_RS08995 PF00849 RNA pseudouridylate synthase LI62_RS08995 PF01479 S4 domain LI62_RS09000 PF02545 Maf-like protein LI62_RS09005 PF02620 LI62_RS09005 LI62_RS09010 PF01783 Ribosomal L32p protein family LI62_RS09015 PF02504 Fatty acid synthesis protein LI62_RS09020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LI62_RS09020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LI62_RS09025 PF00698 Acyl transferase domain LI62_RS09030 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS09035 PF00550 Phosphopantetheine attachment site LI62_RS09040 PF00109 Beta-ketoacyl synthase, N-terminal domain LI62_RS09040 PF02801 Beta-ketoacyl synthase, C-terminal domain LI62_RS09045 PF01063 Aminotransferase class IV LI62_RS09050 PF02618 YceG-like family LI62_RS09055 PF02223 Thymidylate kinase LI62_RS09060 PF09115 DNA polymerase III, delta subunit, C terminal LI62_RS09060 PF13177 DNA polymerase III, delta subunit LI62_RS09065 PF01026 TatD related DNase LI62_RS09070 PF00367 phosphotransferase system, EIIB LI62_RS09070 PF02378 Phosphotransferase system, EIIC LI62_RS09075 PF00593 TonB dependent receptor LI62_RS09075 PF07715 TonB-dependent Receptor Plug Domain LI62_RS09080 PF01230 HIT domain LI62_RS09085 PF07233 Protein of unknown function (DUF1425) LI62_RS09090 PF13036 Protein of unknown function (DUF3897) LI62_RS09095 PF01636 Phosphotransferase enzyme family LI62_RS09100 PF00933 Glycosyl hydrolase family 3 N terminal domain LI62_RS09105 PF05728 Uncharacterised protein family (UPF0227) LI62_RS09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS09115 PF05433 LI62_RS09115 LI62_RS09120 PF00440 Bacterial regulatory proteins, tetR family LI62_RS09125 PF07338 Protein of unknown function (DUF1471) LI62_RS09130 PF01476 LysM domain LI62_RS09130 PF03734 L,D-transpeptidase catalytic domain LI62_RS09135 PF00270 DEAD/DEAH box helicase LI62_RS09135 PF00271 Helicase conserved C-terminal domain LI62_RS09135 PF02559 CarD-like/TRCF domain LI62_RS09135 PF03461 TRCF domain LI62_RS09140 PF01757 LI62_RS09140 LI62_RS09145 PF02687 LI62_RS09145 LI62_RS09145 PF12704 MacB-like periplasmic core domain LI62_RS09150 PF00005 ABC transporter LI62_RS09155 PF02687 LI62_RS09155 LI62_RS09155 PF12704 MacB-like periplasmic core domain LI62_RS09160 PF00480 ROK family LI62_RS09165 PF02146 Sir2 family LI62_RS09170 PF13343 Bacterial extracellular solute-binding protein LI62_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS09180 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS09185 PF00005 ABC transporter LI62_RS09185 PF08402 TOBE domain LI62_RS09195 PF01546 Peptidase family M20/M25/M40 LI62_RS09195 PF07687 Peptidase dimerisation domain LI62_RS09200 PF01797 Transposase IS200 like LI62_RS09205 PF08007 Cupin superfamily protein LI62_RS09210 PF00672 HAMP domain LI62_RS09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS09210 PF08918 PhoQ Sensor LI62_RS09215 PF00072 Response regulator receiver domain LI62_RS09215 PF00486 Transcriptional regulatory protein, C terminal LI62_RS09225 PF00206 Lyase LI62_RS09225 PF08328 Adenylosuccinate lyase C-terminal LI62_RS09230 PF04356 Protein of unknown function (DUF489) LI62_RS09235 PF03054 tRNA methyl transferase LI62_RS09240 PF00293 NUDIX domain LI62_RS09245 PF00849 RNA pseudouridylate synthase LI62_RS09250 PF00180 Isocitrate/isopropylmalate dehydrogenase LI62_RS09255 PF10820 LI62_RS09255 LI62_RS09260 PF00563 EAL domain LI62_RS09260 PF12792 LI62_RS09260 LI62_RS09265 PF04226 LI62_RS09265 LI62_RS09270 PF00990 GGDEF domain LI62_RS09270 PF13185 GAF domain LI62_RS09275 PF03891 LI62_RS09275 LI62_RS09285 PF04343 LI62_RS09285 LI62_RS09290 PF00117 Glutamine amidotransferase class-I LI62_RS09295 PF07690 Major Facilitator Superfamily LI62_RS09300 PF12833 Helix-turn-helix domain LI62_RS09305 PF04284 LI62_RS09305 LI62_RS09310 PF01055 Glycosyl hydrolases family 31 LI62_RS09315 PF13347 MFS/sugar transport protein LI62_RS09320 PF04073 Aminoacyl-tRNA editing domain LI62_RS09325 PF00589 Phage integrase family LI62_RS09325 PF09003 Bacteriophage lambda integrase, N-terminal domain LI62_RS09335 PF04448 LI62_RS09335 LI62_RS09370 PF00717 Peptidase S24-like LI62_RS09370 PF01381 Helix-turn-helix LI62_RS09375 PF09048 Cro LI62_RS09390 PF09524 LI62_RS09390 LI62_RS09390 PF13730 LI62_RS09390 LI62_RS09400 PF05063 LI62_RS09400 LI62_RS09410 PF01726 LexA DNA binding domain LI62_RS09415 PF05866 Endodeoxyribonuclease RusA LI62_RS09420 PF03374 LI62_RS09420 LI62_RS09420 PF09669 LI62_RS09420 LI62_RS09425 PF06147 LI62_RS09425 LI62_RS09430 PF06530 LI62_RS09430 LI62_RS09440 PF16931 LI62_RS09440 LI62_RS09445 PF05449 LI62_RS09445 LI62_RS09450 PF00182 Chitinase class I LI62_RS09480 PF01844 HNH endonuclease LI62_RS09485 PF03592 Terminase small subunit LI62_RS09490 PF03354 LI62_RS09490 LI62_RS09495 PF04586 LI62_RS09495 LI62_RS09495 PF05065 Phage capsid family LI62_RS09500 PF04860 Phage portal protein LI62_RS09510 PF05135 Phage gp6-like head-tail connector protein LI62_RS09515 PF05521 Phage head-tail joining protein LI62_RS09520 PF04883 LI62_RS09520 LI62_RS09525 PF11367 Protein of unknown function (DUF3168) LI62_RS09530 PF04383 KilA-N domain LI62_RS09535 PF08813 LI62_RS09535 LI62_RS09540 PF06222 Phage tail assembly chaperone LI62_RS09545 PF13227 LI62_RS09545 LI62_RS09555 PF06120 LI62_RS09555 LI62_RS09555 PF09718 LI62_RS09555 LI62_RS09560 PF05939 LI62_RS09560 LI62_RS09565 PF05100 LI62_RS09565 LI62_RS09570 PF00877 NlpC/P60 family LI62_RS09570 PF14464 Prokaryotic homologs of the JAB domain LI62_RS09575 PF06805 LI62_RS09575 LI62_RS09580 PF09327 LI62_RS09580 LI62_RS09605 PF04285 LI62_RS09605 LI62_RS09610 PF06798 LI62_RS09610 LI62_RS09610 PF08298 PrkA AAA domain LI62_RS09615 PF06629 LI62_RS09615 LI62_RS09620 PF01263 Aldose 1-epimerase LI62_RS09625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS09625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI62_RS09630 PF01641 SelR domain LI62_RS09635 PF07023 LI62_RS09635 LI62_RS09640 PF00704 Glycosyl hydrolases family 18 LI62_RS09645 PF00857 Isochorismatase family LI62_RS09650 PF00710 Asparaginase LI62_RS09655 PF01343 Peptidase family S49 LI62_RS09660 PF00881 Nitroreductase family LI62_RS09665 PF00586 AIR synthase related protein, N-terminal domain LI62_RS09665 PF02769 AIR synthase related protein, C-terminal domain LI62_RS09670 PF01131 DNA topoisomerase LI62_RS09670 PF01751 Toprim domain LI62_RS09675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LI62_RS09675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LI62_RS09680 PF07383 LI62_RS09680 LI62_RS09685 PF00293 NUDIX domain LI62_RS09690 PF02627 Carboxymuconolactone decarboxylase family LI62_RS09695 PF01066 CDP-alcohol phosphatidyltransferase LI62_RS09700 PF00581 Rhodanese-like domain LI62_RS09705 PF00005 ABC transporter LI62_RS09710 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS09715 PF13416 Bacterial extracellular solute-binding protein LI62_RS09720 PF09335 LI62_RS09720 LI62_RS09725 PF03372 Endonuclease/Exonuclease/phosphatase family LI62_RS09730 PF00202 Aminotransferase class-III LI62_RS09735 PF04958 Arginine N-succinyltransferase beta subunit LI62_RS09740 PF00171 Aldehyde dehydrogenase family LI62_RS09745 PF04996 Succinylarginine dihydrolase LI62_RS09750 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LI62_RS09755 PF07813 LTXXQ motif family protein LI62_RS09760 PF05962 HutD LI62_RS09770 PF02540 NAD synthase LI62_RS09775 PF04355 SmpA / OmlA family LI62_RS09780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS09785 PF02378 Phosphotransferase system, EIIC LI62_RS09790 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LI62_RS09795 PF07883 Cupin domain LI62_RS09795 PF12833 Helix-turn-helix domain LI62_RS09800 PF02056 Family 4 glycosyl hydrolase LI62_RS09800 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI62_RS09805 PF04794 YdjC-like protein LI62_RS09810 PF00199 Catalase LI62_RS09810 PF06628 Catalase-related immune-responsive LI62_RS09815 PF10729 Cell division activator CedA LI62_RS09820 PF00375 Sodium:dicarboxylate symporter family LI62_RS09825 PF04307 LI62_RS09825 LI62_RS09830 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS09835 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS09840 PF14002 LI62_RS09840 LI62_RS09845 PF03881 Fructosamine kinase LI62_RS09850 PF11080 Protein of unknown function (DUF2622) LI62_RS09855 PF00294 pfkB family carbohydrate kinase LI62_RS09860 PF04338 Protein of unknown function, DUF481 LI62_RS09870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LI62_RS09870 PF02824 TGS domain LI62_RS09870 PF03129 Anticodon binding domain LI62_RS09870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI62_RS09875 PF00707 Translation initiation factor IF-3, C-terminal domain LI62_RS09875 PF05198 Translation initiation factor IF-3, N-terminal domain LI62_RS09880 PF01632 Ribosomal protein L35 LI62_RS09885 PF00453 Ribosomal protein L20 LI62_RS09890 PF01409 tRNA synthetases class II core domain (F) LI62_RS09890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LI62_RS09895 PF01588 Putative tRNA binding domain LI62_RS09895 PF03147 Ferredoxin-fold anticodon binding domain LI62_RS09895 PF03483 B3/4 domain LI62_RS09895 PF03484 tRNA synthetase B5 domain LI62_RS09900 PF00216 Bacterial DNA-binding protein LI62_RS09905 PF01032 FecCD transport family LI62_RS09910 PF00255 Glutathione peroxidase LI62_RS09915 PF00005 ABC transporter LI62_RS09920 PF00877 NlpC/P60 family LI62_RS09925 PF00563 EAL domain LI62_RS09930 PF02696 LI62_RS09930 LI62_RS09935 PF00005 ABC transporter LI62_RS09940 PF01032 FecCD transport family LI62_RS09945 PF01497 Periplasmic binding protein LI62_RS09950 PF05171 Haemin-degrading HemS LI62_RS09955 PF00593 TonB dependent receptor LI62_RS09955 PF07715 TonB-dependent Receptor Plug Domain LI62_RS09960 PF10636 Hemin uptake protein hemP LI62_RS09965 PF00793 DAHP synthetase I family LI62_RS09970 PF03618 LI62_RS09970 LI62_RS09975 PF00391 PEP-utilising enzyme, mobile domain LI62_RS09975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LI62_RS09975 PF02896 PEP-utilising enzyme, TIM barrel domain LI62_RS09980 PF13347 MFS/sugar transport protein LI62_RS09985 PF00933 Glycosyl hydrolase family 3 N terminal domain LI62_RS09985 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI62_RS09985 PF14310 Fibronectin type III-like domain LI62_RS09990 PF01594 LI62_RS09990 LI62_RS09995 PF01565 FAD binding domain LI62_RS09995 PF02913 FAD linked oxidases, C-terminal domain LI62_RS09995 PF13183 4Fe-4S dicluster domain LI62_RS10000 PF03061 Thioesterase superfamily LI62_RS10005 PF15930 LI62_RS10005 LI62_RS10010 PF15977 LI62_RS10010 LI62_RS10015 PF15977 LI62_RS10015 LI62_RS10020 PF00419 Fimbrial protein LI62_RS10025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS10025 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS10030 PF00577 Outer membrane usher protein LI62_RS10030 PF13953 PapC C-terminal domain LI62_RS10030 PF13954 PapC N-terminal domain LI62_RS10040 PF00419 Fimbrial protein LI62_RS10045 PF00196 Bacterial regulatory proteins, luxR family LI62_RS10050 PF00384 Molybdopterin oxidoreductase LI62_RS10050 PF01568 Molydopterin dinucleotide binding domain LI62_RS10050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS10055 PF10798 Biofilm development protein YmgB/AriR LI62_RS10070 PF00563 EAL domain LI62_RS10070 PF04940 Sensors of blue-light using FAD LI62_RS10075 PF13411 MerR HTH family regulatory protein LI62_RS10080 PF01521 Iron-sulphur cluster biosynthesis LI62_RS10085 PF01458 Uncharacterized protein family (UPF0051) LI62_RS10090 PF00005 ABC transporter LI62_RS10095 PF01458 Uncharacterized protein family (UPF0051) LI62_RS10100 PF00266 Aminotransferase class-V LI62_RS10105 PF02657 Fe-S metabolism associated domain LI62_RS10110 PF01476 LysM domain LI62_RS10110 PF03734 L,D-transpeptidase catalytic domain LI62_RS10115 PF04728 Lipoprotein leucine-zipper LI62_RS10120 PF00224 Pyruvate kinase, barrel domain LI62_RS10120 PF02887 Pyruvate kinase, alpha/beta domain LI62_RS10125 PF01053 Cys/Met metabolism PLP-dependent enzyme LI62_RS10130 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS10130 PF00571 CBS domain LI62_RS10135 PF00005 ABC transporter LI62_RS10135 PF09383 NIL domain LI62_RS10140 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10145 PF03180 NLPA lipoprotein LI62_RS10150 PF10965 LI62_RS10150 LI62_RS10155 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10160 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10165 PF00005 ABC transporter LI62_RS10170 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS10180 PF09362 LI62_RS10180 LI62_RS10190 PF00753 Metallo-beta-lactamase superfamily LI62_RS10195 PF00484 Carbonic anhydrase LI62_RS10200 PF13454 FAD-NAD(P)-binding LI62_RS10205 PF08971 Glycogen synthesis protein LI62_RS10210 PF00011 Hsp20/alpha crystallin family LI62_RS10225 PF01554 MatE LI62_RS10230 PF00677 Lumazine binding domain LI62_RS10235 PF02353 Mycolic acid cyclopropane synthetase LI62_RS10240 PF07690 Major Facilitator Superfamily LI62_RS10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS10245 PF03466 LysR substrate binding domain LI62_RS10250 PF00356 Bacterial regulatory proteins, lacI family LI62_RS10250 PF13377 Periplasmic binding protein-like domain LI62_RS10260 PF07690 Major Facilitator Superfamily LI62_RS10265 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI62_RS10265 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI62_RS10270 PF00877 NlpC/P60 family LI62_RS10275 PF00462 Glutaredoxin LI62_RS10280 PF00929 Exonuclease LI62_RS10285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS10290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI62_RS10295 PF00440 Bacterial regulatory proteins, tetR family LI62_RS10295 PF16925 LI62_RS10295 LI62_RS10300 PF00884 Sulfatase LI62_RS10300 PF08019 LI62_RS10300 LI62_RS10305 PF06945 LI62_RS10305 LI62_RS10310 PF00248 Aldo/keto reductase family LI62_RS10315 PF00080 Copper/zinc superoxide dismutase (SODC) LI62_RS10320 PF04632 LI62_RS10320 LI62_RS10325 PF16576 LI62_RS10325 LI62_RS10330 PF07869 LI62_RS10330 LI62_RS10335 PF01047 MarR family LI62_RS10340 PF00990 GGDEF domain LI62_RS10340 PF17158 LI62_RS10340 LI62_RS10345 PF05433 LI62_RS10345 LI62_RS10350 PF03702 Uncharacterised protein family (UPF0075) LI62_RS10355 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LI62_RS10360 PF01243 Pyridoxamine 5'-phosphate oxidase LI62_RS10360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LI62_RS10365 PF00579 tRNA synthetases class I (W and Y) LI62_RS10365 PF01479 S4 domain LI62_RS10370 PF08543 Phosphomethylpyrimidine kinase LI62_RS10375 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS10375 PF13409 Glutathione S-transferase, N-terminal domain LI62_RS10380 PF00854 POT family LI62_RS10385 PF00633 Helix-hairpin-helix motif LI62_RS10385 PF00730 HhH-GPD superfamily base excision DNA repair protein LI62_RS10385 PF10576 Iron-sulfur binding domain of endonuclease III LI62_RS10390 PF02508 LI62_RS10390 LI62_RS10395 PF04205 FMN-binding domain LI62_RS10400 PF03116 LI62_RS10400 LI62_RS10405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI62_RS10405 PF10531 SLBB domain LI62_RS10405 PF13237 4Fe-4S dicluster domain LI62_RS10405 PF13375 RnfC Barrel sandwich hybrid domain LI62_RS10410 PF04060 Putative Fe-S cluster LI62_RS10410 PF14697 4Fe-4S dicluster domain LI62_RS10415 PF02508 LI62_RS10415 LI62_RS10420 PF10754 LI62_RS10420 LI62_RS10425 PF05321 Haemolysin expression modulating protein LI62_RS10435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS10435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI62_RS10440 PF00962 Adenosine/AMP deaminase LI62_RS10445 PF00155 Aminotransferase class I and II LI62_RS10450 PF00367 phosphotransferase system, EIIB LI62_RS10450 PF02378 Phosphotransferase system, EIIC LI62_RS10455 PF00356 Bacterial regulatory proteins, lacI family LI62_RS10455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS10460 PF06097 LI62_RS10460 LI62_RS10465 PF01238 Phosphomannose isomerase type I LI62_RS10470 PF05681 LI62_RS10470 LI62_RS10470 PF05683 Fumarase C-terminus LI62_RS10475 PF00206 Lyase LI62_RS10475 PF10415 Fumarase C C-terminus LI62_RS10480 PF05472 DNA replication terminus site-binding protein (Ter protein) LI62_RS10485 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS10485 PF00672 HAMP domain LI62_RS10485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS10495 PF00313 'Cold-shock' DNA-binding domain LI62_RS10505 PF00072 Response regulator receiver domain LI62_RS10505 PF00486 Transcriptional regulatory protein, C terminal LI62_RS10510 PF06942 LI62_RS10510 LI62_RS10515 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS10520 PF13520 Amino acid permease LI62_RS10525 PF07338 Protein of unknown function (DUF1471) LI62_RS10530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LI62_RS10530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LI62_RS10530 PF12769 Domain of unknown function (DUF3814) LI62_RS10535 PF02233 NAD(P) transhydrogenase beta subunit LI62_RS10540 PF00924 Mechanosensitive ion channel LI62_RS10545 PF00582 Universal stress protein family LI62_RS10550 PF00027 Cyclic nucleotide-binding domain LI62_RS10550 PF13545 Crp-like helix-turn-helix domain LI62_RS10555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI62_RS10555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI62_RS10560 PF03806 LI62_RS10560 LI62_RS10570 PF01546 Peptidase family M20/M25/M40 LI62_RS10570 PF07687 Peptidase dimerisation domain LI62_RS10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS10575 PF03466 LysR substrate binding domain LI62_RS10580 PF01713 Smr domain LI62_RS10585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS10585 PF00672 HAMP domain LI62_RS10585 PF02203 Tar ligand binding domain homologue LI62_RS10590 PF00248 Aldo/keto reductase family LI62_RS10600 PF00717 Peptidase S24-like LI62_RS10605 PF01011 PQQ enzyme repeat LI62_RS10610 PF00675 Insulinase (Peptidase family M16) LI62_RS10615 PF04055 Radical SAM superfamily LI62_RS10615 PF13186 Iron-sulfur cluster-binding domain LI62_RS10615 PF13353 4Fe-4S single cluster domain LI62_RS10620 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LI62_RS10625 PF03070 TENA/THI-4/PQQC family LI62_RS10630 PF12706 Beta-lactamase superfamily domain LI62_RS10635 PF01244 Membrane dipeptidase (Peptidase family M19) LI62_RS10640 PF00817 impB/mucB/samB family LI62_RS10640 PF11798 IMS family HHH motif LI62_RS10640 PF11799 impB/mucB/samB family C-terminal domain LI62_RS10640 PF13438 LI62_RS10640 LI62_RS10650 PF01844 HNH endonuclease LI62_RS10655 PF00296 Luciferase-like monooxygenase LI62_RS10665 PF01594 LI62_RS10665 LI62_RS10670 PF00893 Small Multidrug Resistance protein LI62_RS10675 PF00893 Small Multidrug Resistance protein LI62_RS10690 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LI62_RS10695 PF07690 Major Facilitator Superfamily LI62_RS10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS10700 PF03466 LysR substrate binding domain LI62_RS10705 PF00480 ROK family LI62_RS10710 PF13500 AAA domain LI62_RS10715 PF00654 Voltage gated chloride channel LI62_RS10720 PF00005 ABC transporter LI62_RS10720 PF00571 CBS domain LI62_RS10725 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI62_RS10735 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10740 PF06912 LI62_RS10740 LI62_RS10745 PF07690 Major Facilitator Superfamily LI62_RS10750 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LI62_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS10755 PF03466 LysR substrate binding domain LI62_RS10760 PF00302 Chloramphenicol acetyltransferase LI62_RS10770 PF07130 YebG protein LI62_RS10775 PF02613 Nitrate reductase delta subunit LI62_RS10780 PF04976 LI62_RS10780 LI62_RS10785 PF12800 4Fe-4S binding domain LI62_RS10785 PF13247 4Fe-4S dicluster domain LI62_RS10790 PF00384 Molybdopterin oxidoreductase LI62_RS10790 PF01568 Molydopterin dinucleotide binding domain LI62_RS10790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS10795 PF06649 LI62_RS10795 LI62_RS10800 PF01755 LI62_RS10800 LI62_RS10805 PF06788 LI62_RS10805 LI62_RS10810 PF13302 Acetyltransferase (GNAT) domain LI62_RS10815 PF06932 LI62_RS10815 LI62_RS10820 PF02694 LI62_RS10820 LI62_RS10825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI62_RS10825 PF13378 Enolase C-terminal domain-like LI62_RS10830 PF00107 Zinc-binding dehydrogenase LI62_RS10830 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS10835 PF07690 Major Facilitator Superfamily LI62_RS10840 PF02614 Glucuronate isomerase LI62_RS10850 PF01232 Mannitol dehydrogenase Rossmann domain LI62_RS10850 PF08125 Mannitol dehydrogenase C-terminal domain LI62_RS10855 PF14001 LI62_RS10855 LI62_RS10860 PF00582 Universal stress protein family LI62_RS10865 PF00392 Bacterial regulatory proteins, gntR family LI62_RS10865 PF07729 FCD domain LI62_RS10870 PF00106 short chain dehydrogenase LI62_RS10875 PF01432 Peptidase family M3 LI62_RS10885 PF00593 TonB dependent receptor LI62_RS10885 PF07715 TonB-dependent Receptor Plug Domain LI62_RS10895 PF07566 Domain of Unknown Function (DUF1543) LI62_RS10900 PF13531 Bacterial extracellular solute-binding protein LI62_RS10905 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS10910 PF06183 DinI-like family LI62_RS10915 PF01490 LI62_RS10915 LI62_RS10925 PF13360 PQQ-like domain LI62_RS10930 PF13628 LI62_RS10930 LI62_RS10935 PF07338 Protein of unknown function (DUF1471) LI62_RS10940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI62_RS10940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI62_RS10945 PF11739 LI62_RS10945 LI62_RS10950 PF13617 LI62_RS10950 LI62_RS10955 PF07027 LI62_RS10955 LI62_RS10960 PF12833 Helix-turn-helix domain LI62_RS10960 PF14525 LI62_RS10960 LI62_RS10965 PF00171 Aldehyde dehydrogenase family LI62_RS10970 PF00990 GGDEF domain LI62_RS10970 PF17178 LI62_RS10970 LI62_RS10975 PF00753 Metallo-beta-lactamase superfamily LI62_RS10975 PF14863 Alkyl sulfatase dimerisation LI62_RS10975 PF14864 Alkyl sulfatase C-terminal LI62_RS10980 PF01179 Copper amine oxidase, enzyme domain LI62_RS10980 PF02727 Copper amine oxidase, N2 domain LI62_RS10980 PF02728 Copper amine oxidase, N3 domain LI62_RS10980 PF07833 Copper amine oxidase N-terminal domain LI62_RS10985 PF00171 Aldehyde dehydrogenase family LI62_RS10985 PF01575 MaoC like domain LI62_RS10990 PF05138 Phenylacetic acid catabolic protein LI62_RS10995 PF06243 Phenylacetic acid degradation B LI62_RS11000 PF05138 Phenylacetic acid catabolic protein LI62_RS11005 PF01883 Domain of unknown function DUF59 LI62_RS11010 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS11010 PF00175 Oxidoreductase NAD-binding domain LI62_RS11010 PF00970 Oxidoreductase FAD-binding domain LI62_RS11015 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS11020 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS11025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI62_RS11025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI62_RS11030 PF03061 Thioesterase superfamily LI62_RS11035 PF00108 Thiolase, N-terminal domain LI62_RS11035 PF02803 Thiolase, C-terminal domain LI62_RS11040 PF00501 AMP-binding enzyme LI62_RS11040 PF14535 AMP-binding enzyme C-terminal domain LI62_RS11045 PF07848 PaaX-like protein LI62_RS11045 PF08223 PaaX-like protein C-terminal domain LI62_RS11050 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS11055 PF15977 LI62_RS11055 LI62_RS11060 PF00753 Metallo-beta-lactamase superfamily LI62_RS11060 PF14863 Alkyl sulfatase dimerisation LI62_RS11060 PF14864 Alkyl sulfatase C-terminal LI62_RS11075 PF12680 SnoaL-like domain LI62_RS11080 PF00106 short chain dehydrogenase LI62_RS11085 PF01593 Flavin containing amine oxidoreductase LI62_RS11090 PF07103 LI62_RS11090 LI62_RS11095 PF02353 Mycolic acid cyclopropane synthetase LI62_RS11100 PF11086 LI62_RS11100 LI62_RS11110 PF12915 LI62_RS11110 LI62_RS11115 PF04657 LI62_RS11115 LI62_RS11120 PF04657 LI62_RS11120 LI62_RS11125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11125 PF03466 LysR substrate binding domain LI62_RS11130 PF01717 Cobalamin-independent synthase, Catalytic domain LI62_RS11135 PF08908 LI62_RS11135 LI62_RS11140 PF09831 LI62_RS11140 LI62_RS11145 PF00849 RNA pseudouridylate synthase LI62_RS11150 PF02525 Flavodoxin-like fold LI62_RS11155 PF00271 Helicase conserved C-terminal domain LI62_RS11155 PF04408 Helicase associated domain (HA2) LI62_RS11155 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LI62_RS11155 PF11898 LI62_RS11155 LI62_RS11160 PF01596 O-methyltransferase LI62_RS11165 PF02321 Outer membrane efflux protein LI62_RS11170 PF00529 HlyD family secretion protein LI62_RS11170 PF16576 LI62_RS11170 LI62_RS11175 PF07690 Major Facilitator Superfamily LI62_RS11180 PF02698 DUF218 domain LI62_RS11185 PF00171 Aldehyde dehydrogenase family LI62_RS11190 PF01292 Prokaryotic cytochrome b561 LI62_RS11195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS11195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI62_RS11200 PF00455 LI62_RS11200 LI62_RS11200 PF08220 DeoR-like helix-turn-helix domain LI62_RS11205 PF02321 Outer membrane efflux protein LI62_RS11215 PF00005 ABC transporter LI62_RS11215 PF00664 ABC transporter transmembrane region LI62_RS11220 PF13437 HlyD family secretion protein LI62_RS11220 PF13533 Biotin-lipoyl like LI62_RS11230 PF00196 Bacterial regulatory proteins, luxR family LI62_RS11230 PF00563 EAL domain LI62_RS11235 PF10798 Biofilm development protein YmgB/AriR LI62_RS11250 PF05957 LI62_RS11250 LI62_RS11265 PF02583 Metal-sensitive transcriptional repressor LI62_RS11270 PF00107 Zinc-binding dehydrogenase LI62_RS11270 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS11275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS11275 PF00672 HAMP domain LI62_RS11275 PF02203 Tar ligand binding domain homologue LI62_RS11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11280 PF03466 LysR substrate binding domain LI62_RS11285 PF07063 Domain of unknown function (DUF1338) LI62_RS11290 PF00135 Carboxylesterase family LI62_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11295 PF03466 LysR substrate binding domain LI62_RS11300 PF00155 Aminotransferase class I and II LI62_RS11305 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS11310 PF04349 Periplasmic glucan biosynthesis protein, MdoG LI62_RS11315 PF13302 Acetyltransferase (GNAT) domain LI62_RS11325 PF03595 Voltage-dependent anion channel LI62_RS11330 PF03848 Tellurite resistance protein TehB LI62_RS11335 PF01546 Peptidase family M20/M25/M40 LI62_RS11335 PF07687 Peptidase dimerisation domain LI62_RS11340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS11345 PF11769 LI62_RS11345 LI62_RS11350 PF00892 EamA-like transporter family LI62_RS11355 PF12833 Helix-turn-helix domain LI62_RS11360 PF03594 LI62_RS11360 LI62_RS11365 PF01381 Helix-turn-helix LI62_RS11365 PF07883 Cupin domain LI62_RS11370 PF01136 LI62_RS11370 LI62_RS11370 PF12392 LI62_RS11370 LI62_RS11375 PF10829 LI62_RS11375 LI62_RS11385 PF01965 DJ-1/PfpI family LI62_RS11385 PF12833 Helix-turn-helix domain LI62_RS11390 PF00581 Rhodanese-like domain LI62_RS11395 PF01717 Cobalamin-independent synthase, Catalytic domain LI62_RS11400 PF02653 LI62_RS11400 LI62_RS11405 PF02653 LI62_RS11405 LI62_RS11410 PF00005 ABC transporter LI62_RS11410 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI62_RS11415 PF00005 ABC transporter LI62_RS11420 PF09223 YodA lipocalin-like domain LI62_RS11425 PF07690 Major Facilitator Superfamily LI62_RS11430 PF00892 EamA-like transporter family LI62_RS11435 PF13999 LI62_RS11435 LI62_RS11440 PF12833 Helix-turn-helix domain LI62_RS11445 PF01047 MarR family LI62_RS11450 PF01914 LI62_RS11450 LI62_RS11455 PF07690 Major Facilitator Superfamily LI62_RS11460 PF02567 Phenazine biosynthesis-like protein LI62_RS11465 PF02567 Phenazine biosynthesis-like protein LI62_RS11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11470 PF03466 LysR substrate binding domain LI62_RS11475 PF00171 Aldehyde dehydrogenase family LI62_RS11480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS11480 PF00672 HAMP domain LI62_RS11480 PF02203 Tar ligand binding domain homologue LI62_RS11485 PF04960 Glutaminase LI62_RS11490 PF13811 LI62_RS11490 LI62_RS11495 PF00990 GGDEF domain LI62_RS11495 PF01590 GAF domain LI62_RS11500 PF13673 Acetyltransferase (GNAT) domain LI62_RS11505 PF01232 Mannitol dehydrogenase Rossmann domain LI62_RS11505 PF08125 Mannitol dehydrogenase C-terminal domain LI62_RS11510 PF01062 LI62_RS11510 LI62_RS11515 PF13302 Acetyltransferase (GNAT) domain LI62_RS11520 PF13437 HlyD family secretion protein LI62_RS11525 PF00005 ABC transporter LI62_RS11525 PF00664 ABC transporter transmembrane region LI62_RS11525 PF03412 Peptidase C39 family LI62_RS11530 PF00583 Acetyltransferase (GNAT) family LI62_RS11535 PF00561 alpha/beta hydrolase fold LI62_RS11540 PF00072 Response regulator receiver domain LI62_RS11540 PF00486 Transcriptional regulatory protein, C terminal LI62_RS11545 PF00672 HAMP domain LI62_RS11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS11550 PF00578 AhpC/TSA family LI62_RS11550 PF02683 LI62_RS11550 LI62_RS11555 PF13489 Methyltransferase domain LI62_RS11565 PF00455 LI62_RS11565 LI62_RS11565 PF08220 DeoR-like helix-turn-helix domain LI62_RS11570 PF00295 Glycosyl hydrolases family 28 LI62_RS11575 PF00293 NUDIX domain LI62_RS11580 PF13737 LI62_RS11580 LI62_RS11585 PF07690 Major Facilitator Superfamily LI62_RS11590 PF00465 Iron-containing alcohol dehydrogenase LI62_RS11600 PF01636 Phosphotransferase enzyme family LI62_RS11610 PF13737 LI62_RS11610 LI62_RS11620 PF13518 Helix-turn-helix domain LI62_RS11625 PF13673 Acetyltransferase (GNAT) domain LI62_RS11630 PF08681 Protein of unknown function (DUF1778) LI62_RS11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11635 PF03466 LysR substrate binding domain LI62_RS11640 PF07690 Major Facilitator Superfamily LI62_RS11645 PF11199 LI62_RS11645 LI62_RS11650 PF06166 LI62_RS11650 LI62_RS11655 PF06149 LI62_RS11655 LI62_RS11660 PF13463 Winged helix DNA-binding domain LI62_RS11665 PF00128 Alpha amylase, catalytic domain LI62_RS11665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI62_RS11670 PF00128 Alpha amylase, catalytic domain LI62_RS11675 PF00128 Alpha amylase, catalytic domain LI62_RS11675 PF11941 Domain of unknown function (DUF3459) LI62_RS11680 PF00583 Acetyltransferase (GNAT) family LI62_RS11685 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS11690 PF00753 Metallo-beta-lactamase superfamily LI62_RS11695 PF13577 SnoaL-like domain LI62_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11700 PF03466 LysR substrate binding domain LI62_RS11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11705 PF03466 LysR substrate binding domain LI62_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11710 PF03466 LysR substrate binding domain LI62_RS11715 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI62_RS11720 PF09905 Uncharacterized conserved protein (DUF2132) LI62_RS11725 PF02638 LI62_RS11725 LI62_RS11730 PF13098 Thioredoxin-like domain LI62_RS11735 PF04542 Sigma-70 region 2 LI62_RS11735 PF08281 Sigma-70, region 4 LI62_RS11745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS11745 PF00672 HAMP domain LI62_RS11745 PF02203 Tar ligand binding domain homologue LI62_RS11750 PF00356 Bacterial regulatory proteins, lacI family LI62_RS11750 PF13377 Periplasmic binding protein-like domain LI62_RS11755 PF00251 Glycosyl hydrolases family 32 N-terminal domain LI62_RS11760 PF00367 phosphotransferase system, EIIB LI62_RS11760 PF02378 Phosphotransferase system, EIIC LI62_RS11765 PF02264 LamB porin LI62_RS11765 PF11471 LI62_RS11765 LI62_RS11770 PF00294 pfkB family carbohydrate kinase LI62_RS11775 PF00563 EAL domain LI62_RS11775 PF04940 Sensors of blue-light using FAD LI62_RS11780 PF12146 Putative lysophospholipase LI62_RS11785 PF01418 Helix-turn-helix domain, rpiR family LI62_RS11790 PF01427 D-ala-D-ala dipeptidase LI62_RS11795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS11800 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS11805 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS11805 PF12911 LI62_RS11805 LI62_RS11810 PF00005 ABC transporter LI62_RS11810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS11815 PF00005 ABC transporter LI62_RS11815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS11820 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS11830 PF02566 OsmC-like protein LI62_RS11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS11835 PF03466 LysR substrate binding domain LI62_RS11840 PF00753 Metallo-beta-lactamase superfamily LI62_RS11845 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS11850 PF10684 LI62_RS11850 LI62_RS11850 PF10798 Biofilm development protein YmgB/AriR LI62_RS11855 PF08136 LI62_RS11855 LI62_RS11860 PF00390 Malic enzyme, N-terminal domain LI62_RS11860 PF03949 Malic enzyme, NAD binding domain LI62_RS11865 PF00005 ABC transporter LI62_RS11870 PF00107 Zinc-binding dehydrogenase LI62_RS11870 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS11875 PF02082 Transcriptional regulator LI62_RS11880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS11885 PF07690 Major Facilitator Superfamily LI62_RS11890 PF03976 Polyphosphate kinase 2 (PPK2) LI62_RS11895 PF01292 Prokaryotic cytochrome b561 LI62_RS11900 PF09163 Formate dehydrogenase N, transmembrane LI62_RS11900 PF12800 4Fe-4S binding domain LI62_RS11900 PF13247 4Fe-4S dicluster domain LI62_RS11905 PF00384 Molybdopterin oxidoreductase LI62_RS11905 PF01568 Molydopterin dinucleotide binding domain LI62_RS11910 PF00384 Molybdopterin oxidoreductase LI62_RS11910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS11915 PF00892 EamA-like transporter family LI62_RS11920 PF00267 Gram-negative porin LI62_RS11925 PF07690 Major Facilitator Superfamily LI62_RS11930 PF00440 Bacterial regulatory proteins, tetR family LI62_RS11935 PF07690 Major Facilitator Superfamily LI62_RS11940 PF00384 Molybdopterin oxidoreductase LI62_RS11940 PF01568 Molydopterin dinucleotide binding domain LI62_RS11940 PF14710 Respiratory nitrate reductase alpha N-terminal LI62_RS11945 PF13247 4Fe-4S dicluster domain LI62_RS11945 PF14711 Respiratory nitrate reductase beta C-terminal LI62_RS11950 PF02613 Nitrate reductase delta subunit LI62_RS11955 PF02665 Nitrate reductase gamma subunit LI62_RS11960 PF00797 N-acetyltransferase LI62_RS11965 PF01613 Flavin reductase like domain LI62_RS11975 PF12883 Protein of unknown function (DUF3828) LI62_RS11980 PF00009 Elongation factor Tu GTP binding domain LI62_RS11980 PF00679 Elongation factor G C-terminus LI62_RS11980 PF03144 Elongation factor Tu domain 2 LI62_RS11980 PF03764 Elongation factor G, domain IV LI62_RS11980 PF14492 Elongation Factor G, domain II LI62_RS11985 PF12840 Helix-turn-helix domain LI62_RS11990 PF14090 LI62_RS11990 LI62_RS11995 PF03279 LI62_RS11995 LI62_RS12000 PF01361 Tautomerase enzyme LI62_RS12005 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS12010 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS12015 PF00005 ABC transporter LI62_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12025 PF00583 Acetyltransferase (GNAT) family LI62_RS12030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS12035 PF00296 Luciferase-like monooxygenase LI62_RS12040 PF01546 Peptidase family M20/M25/M40 LI62_RS12040 PF07687 Peptidase dimerisation domain LI62_RS12045 PF00296 Luciferase-like monooxygenase LI62_RS12050 PF01202 Shikimate kinase LI62_RS12055 PF07883 Cupin domain LI62_RS12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS12060 PF03466 LysR substrate binding domain LI62_RS12065 PF00324 Amino acid permease LI62_RS12075 PF00593 TonB dependent receptor LI62_RS12075 PF07715 TonB-dependent Receptor Plug Domain LI62_RS12080 PF00392 Bacterial regulatory proteins, gntR family LI62_RS12080 PF07729 FCD domain LI62_RS12085 PF00107 Zinc-binding dehydrogenase LI62_RS12085 PF16884 LI62_RS12085 LI62_RS12090 PF01381 Helix-turn-helix LI62_RS12095 PF00583 Acetyltransferase (GNAT) family LI62_RS12100 PF04657 LI62_RS12100 LI62_RS12105 PF10735 LI62_RS12105 LI62_RS12110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS12120 PF07520 LI62_RS12120 LI62_RS12125 PF10139 LI62_RS12125 LI62_RS12130 PF12697 Alpha/beta hydrolase family LI62_RS12135 PF10753 LI62_RS12135 LI62_RS12140 PF09313 Domain of unknown function (DUF1971) LI62_RS12145 PF09313 Domain of unknown function (DUF1971) LI62_RS12150 PF08956 Domain of unknown function (DUF1869) LI62_RS12155 PF00171 Aldehyde dehydrogenase family LI62_RS12160 PF00155 Aminotransferase class I and II LI62_RS12160 PF00392 Bacterial regulatory proteins, gntR family LI62_RS12170 PF01654 LI62_RS12170 LI62_RS12175 PF02322 LI62_RS12175 LI62_RS12180 PF10617 LI62_RS12180 LI62_RS12185 PF03724 META domain LI62_RS12190 PF03891 LI62_RS12190 LI62_RS12195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LI62_RS12195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LI62_RS12195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS12195 PF10371 Domain of unknown function LI62_RS12195 PF12838 4Fe-4S dicluster domain LI62_RS12195 PF17147 LI62_RS12195 LI62_RS12205 PF00267 Gram-negative porin LI62_RS12210 PF04828 Glutathione-dependent formaldehyde-activating enzyme LI62_RS12220 PF01171 PP-loop family LI62_RS12225 PF00270 DEAD/DEAH box helicase LI62_RS12225 PF00271 Helicase conserved C-terminal domain LI62_RS12225 PF03880 DbpA RNA binding domain LI62_RS12235 PF01544 CorA-like Mg2+ transporter protein LI62_RS12240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS12250 PF06812 LI62_RS12250 LI62_RS12250 PF12486 LI62_RS12250 LI62_RS12255 PF04965 Gene 25-like lysozyme LI62_RS12265 PF11876 LI62_RS12265 LI62_RS12280 PF05954 Phage late control gene D protein (GPD) LI62_RS12300 PF05954 Phage late control gene D protein (GPD) LI62_RS12300 PF10106 LI62_RS12300 LI62_RS12300 PF13296 LI62_RS12300 LI62_RS12305 PF12790 Type VI secretion lipoprotein LI62_RS12310 PF06996 LI62_RS12310 LI62_RS12315 PF05947 LI62_RS12315 LI62_RS12320 PF06812 LI62_RS12320 LI62_RS12320 PF16989 LI62_RS12320 LI62_RS12325 PF06744 LI62_RS12325 LI62_RS12325 PF06761 LI62_RS12325 LI62_RS12345 PF05954 Phage late control gene D protein (GPD) LI62_RS12345 PF10106 LI62_RS12345 LI62_RS12345 PF13296 LI62_RS12345 LI62_RS12350 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS12350 PF07724 AAA domain (Cdc48 subfamily) LI62_RS12350 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS12355 PF05638 Protein of unknown function (DUF796) LI62_RS12360 PF00691 OmpA family LI62_RS12365 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) LI62_RS12370 PF05936 LI62_RS12370 LI62_RS12375 PF05943 LI62_RS12375 LI62_RS12380 PF05591 LI62_RS12380 LI62_RS12385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS12390 PF00246 Zinc carboxypeptidase LI62_RS12395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI62_RS12395 PF13378 Enolase C-terminal domain-like LI62_RS12400 PF08534 Redoxin LI62_RS12405 PF00158 Sigma-54 interaction domain LI62_RS12410 PF05128 LI62_RS12410 LI62_RS12415 PF04317 LI62_RS12415 LI62_RS12420 PF00356 Bacterial regulatory proteins, lacI family LI62_RS12420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS12425 PF09381 Outer membrane protein G (OmpG) LI62_RS12430 PF00005 ABC transporter LI62_RS12430 PF08402 TOBE domain LI62_RS12435 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS12440 PF03632 Glycosyl hydrolase family 65 central catalytic domain LI62_RS12440 PF03633 Glycosyl hydrolase family 65, C-terminal domain LI62_RS12440 PF03636 Glycosyl hydrolase family 65, N-terminal domain LI62_RS12445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS12445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI62_RS12450 PF01261 Xylose isomerase-like TIM barrel LI62_RS12455 PF00107 Zinc-binding dehydrogenase LI62_RS12460 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12470 PF01547 Bacterial extracellular solute-binding protein LI62_RS12475 PF00128 Alpha amylase, catalytic domain LI62_RS12480 PF09584 LI62_RS12480 LI62_RS12485 PF04024 LI62_RS12485 LI62_RS12490 PF06667 LI62_RS12490 LI62_RS12495 PF04012 LI62_RS12495 LI62_RS12500 PF00158 Sigma-54 interaction domain LI62_RS12500 PF02954 Bacterial regulatory protein, Fis family LI62_RS12505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS12510 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12515 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12515 PF12911 LI62_RS12515 LI62_RS12520 PF00005 ABC transporter LI62_RS12520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS12525 PF00005 ABC transporter LI62_RS12530 PF00440 Bacterial regulatory proteins, tetR family LI62_RS12535 PF01042 Endoribonuclease L-PSP LI62_RS12540 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS12550 PF00575 S1 RNA binding domain LI62_RS12550 PF00773 RNB domain LI62_RS12550 PF08206 Ribonuclease B OB domain LI62_RS12555 PF00563 EAL domain LI62_RS12555 PF00990 GGDEF domain LI62_RS12555 PF13426 PAS domain LI62_RS12560 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS12570 PF00455 LI62_RS12570 LI62_RS12570 PF08220 DeoR-like helix-turn-helix domain LI62_RS12575 PF05433 LI62_RS12575 LI62_RS12580 PF01253 Translation initiation factor SUI1 LI62_RS12585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS12590 PF13181 Tetratricopeptide repeat LI62_RS12595 PF06305 LI62_RS12595 LI62_RS12600 PF01569 PAP2 superfamily LI62_RS12605 PF00925 GTP cyclohydrolase II LI62_RS12610 PF00330 Aconitase family (aconitate hydratase) LI62_RS12610 PF00694 Aconitase C-terminal domain LI62_RS12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS12630 PF03466 LysR substrate binding domain LI62_RS12635 PF01131 DNA topoisomerase LI62_RS12635 PF01396 LI62_RS12635 LI62_RS12635 PF01751 Toprim domain LI62_RS12635 PF08272 Topoisomerase I zinc-ribbon-like LI62_RS12640 PF10692 Protein of unknown function (DUF2498) LI62_RS12645 PF01343 Peptidase family S49 LI62_RS12645 PF08496 LI62_RS12645 LI62_RS12650 PF00106 short chain dehydrogenase LI62_RS12655 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LI62_RS12660 PF00849 RNA pseudouridylate synthase LI62_RS12660 PF01479 S4 domain LI62_RS12665 PF01300 Telomere recombination LI62_RS12670 PF02811 PHP domain LI62_RS12675 PF00425 chorismate binding enzyme LI62_RS12675 PF04715 Anthranilate synthase component I, N terminal region LI62_RS12680 PF00117 Glutamine amidotransferase class-I LI62_RS12680 PF00591 Glycosyl transferase family, a/b domain LI62_RS12680 PF02885 Glycosyl transferase family, helical bundle domain LI62_RS12685 PF00218 Indole-3-glycerol phosphate synthase LI62_RS12685 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LI62_RS12690 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS12695 PF00290 Tryptophan synthase alpha chain LI62_RS12700 PF04143 LI62_RS12700 LI62_RS12705 PF01206 Sulfurtransferase TusA LI62_RS12710 PF03922 OmpW family LI62_RS12715 PF03692 LI62_RS12715 LI62_RS12720 PF06790 LI62_RS12720 LI62_RS12725 PF04279 LI62_RS12725 LI62_RS12730 PF00593 TonB dependent receptor LI62_RS12730 PF07715 TonB-dependent Receptor Plug Domain LI62_RS12735 PF03061 Thioesterase superfamily LI62_RS12740 PF03544 Gram-negative bacterial TonB protein C-terminal LI62_RS12740 PF16031 LI62_RS12740 LI62_RS12745 PF03795 YCII-related domain LI62_RS12750 PF01810 LI62_RS12750 LI62_RS12760 PF13091 PLD-like domain LI62_RS12760 PF13396 LI62_RS12760 LI62_RS12765 PF04269 Protein of unknown function, DUF440 LI62_RS12770 PF00520 Ion transport protein LI62_RS12775 PF00005 ABC transporter LI62_RS12775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS12780 PF00005 ABC transporter LI62_RS12780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12785 PF12911 LI62_RS12785 LI62_RS12790 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS12800 PF01914 LI62_RS12800 LI62_RS12805 PF00171 Aldehyde dehydrogenase family LI62_RS12805 PF00465 Iron-containing alcohol dehydrogenase LI62_RS12810 PF00265 Thymidine kinase LI62_RS12815 PF00816 H-NS histone family LI62_RS12820 PF00483 Nucleotidyl transferase LI62_RS12825 PF00072 Response regulator receiver domain LI62_RS12830 PF01734 Patatin-like phospholipase LI62_RS12835 PF02810 SEC-C motif LI62_RS12840 PF00551 Formyl transferase LI62_RS12840 PF01842 ACT domain LI62_RS12855 PF02665 Nitrate reductase gamma subunit LI62_RS12860 PF02613 Nitrate reductase delta subunit LI62_RS12865 PF13247 4Fe-4S dicluster domain LI62_RS12865 PF14711 Respiratory nitrate reductase beta C-terminal LI62_RS12870 PF00384 Molybdopterin oxidoreductase LI62_RS12870 PF01568 Molydopterin dinucleotide binding domain LI62_RS12870 PF14710 Respiratory nitrate reductase alpha N-terminal LI62_RS12875 PF07690 Major Facilitator Superfamily LI62_RS12880 PF00672 HAMP domain LI62_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS12880 PF07730 Histidine kinase LI62_RS12880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LI62_RS12885 PF00072 Response regulator receiver domain LI62_RS12885 PF00196 Bacterial regulatory proteins, luxR family LI62_RS12890 PF11924 Protein of unknown function (DUF3442) LI62_RS12895 PF00384 Molybdopterin oxidoreductase LI62_RS12895 PF01568 Molydopterin dinucleotide binding domain LI62_RS12895 PF04324 BFD-like [2Fe-2S] binding domain LI62_RS12895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS12900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI62_RS12900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI62_RS12900 PF04324 BFD-like [2Fe-2S] binding domain LI62_RS12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS12900 PF13806 Rieske-like [2Fe-2S] domain LI62_RS12905 PF00005 ABC transporter LI62_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS12915 PF13379 NMT1-like family LI62_RS12920 PF03861 ANTAR domain LI62_RS12920 PF08376 Nitrate and nitrite sensing LI62_RS12925 PF02635 DsrE/DsrF-like family LI62_RS12930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS12930 PF00672 HAMP domain LI62_RS12930 PF02743 Cache domain LI62_RS12940 PF04752 LI62_RS12940 LI62_RS12945 PF06150 ChaB LI62_RS12950 PF01699 Sodium/calcium exchanger protein LI62_RS12955 PF00793 DAHP synthetase I family LI62_RS12960 PF13369 LI62_RS12960 LI62_RS12960 PF13371 Tetratricopeptide repeat LI62_RS12965 PF04247 LI62_RS12965 LI62_RS12970 PF13847 Methyltransferase domain LI62_RS12975 PF00472 RF-1 domain LI62_RS12975 PF03462 PCRF domain LI62_RS12980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LI62_RS12980 PF01488 Shikimate / quinate 5-dehydrogenase LI62_RS12980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LI62_RS12985 PF03550 Outer membrane lipoprotein LolB LI62_RS12990 PF00288 GHMP kinases N terminal domain LI62_RS12990 PF08544 GHMP kinases C terminal LI62_RS12995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LI62_RS12995 PF14572 Phosphoribosyl synthetase-associated domain LI62_RS13000 PF00916 LI62_RS13000 LI62_RS13000 PF01740 STAS domain LI62_RS13005 PF13411 MerR HTH family regulatory protein LI62_RS13010 PF10762 LI62_RS13010 LI62_RS13015 PF01195 Peptidyl-tRNA hydrolase LI62_RS13020 PF01926 50S ribosome-binding GTPase LI62_RS13020 PF06071 Protein of unknown function (DUF933) LI62_RS13030 PF09346 SMI1 / KNR4 family (SUKH-1) LI62_RS13035 PF15428 LI62_RS13035 LI62_RS13040 PF03527 LI62_RS13040 LI62_RS13050 PF01320 Colicin immunity protein / pyocin immunity protein LI62_RS13055 PF03527 LI62_RS13055 LI62_RS13055 PF05488 PAAR motif LI62_RS13055 PF05593 LI62_RS13055 LI62_RS13060 PF08786 Domain of unknown function (DUF1795) LI62_RS13065 PF05954 Phage late control gene D protein (GPD) LI62_RS13080 PF00069 Protein kinase domain LI62_RS13085 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS13085 PF02861 Clp amino terminal domain LI62_RS13085 PF07724 AAA domain (Cdc48 subfamily) LI62_RS13085 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS13090 PF06996 LI62_RS13090 LI62_RS13095 PF05947 LI62_RS13095 LI62_RS13100 PF04965 Gene 25-like lysozyme LI62_RS13105 PF07024 ImpE protein LI62_RS13115 PF13672 Protein phosphatase 2C LI62_RS13120 PF00498 FHA domain LI62_RS13135 PF05638 Protein of unknown function (DUF796) LI62_RS13140 PF16695 LI62_RS13140 LI62_RS13145 PF14113 Domain of unknown function (DUF4285) LI62_RS13150 PF05943 LI62_RS13150 LI62_RS13155 PF05591 LI62_RS13155 LI62_RS13160 PF06812 LI62_RS13160 LI62_RS13165 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) LI62_RS13170 PF06744 LI62_RS13170 LI62_RS13170 PF06761 LI62_RS13170 LI62_RS13170 PF14331 LI62_RS13170 LI62_RS13175 PF00691 OmpA family LI62_RS13175 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) LI62_RS13180 PF05936 LI62_RS13180 LI62_RS13185 PF12790 Type VI secretion lipoprotein LI62_RS13195 PF01965 DJ-1/PfpI family LI62_RS13195 PF12833 Helix-turn-helix domain LI62_RS13200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS13200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI62_RS13205 PF16966 LI62_RS13205 LI62_RS13210 PF01204 Trehalase LI62_RS13215 PF00593 TonB dependent receptor LI62_RS13215 PF07715 TonB-dependent Receptor Plug Domain LI62_RS13220 PF07238 PilZ domain LI62_RS13220 PF07317 Flagellar regulator YcgR LI62_RS13225 PF01464 Transglycosylase SLT domain LI62_RS13230 PF02016 LD-carboxypeptidase LI62_RS13235 PF00999 Sodium/hydrogen exchanger family LI62_RS13235 PF02080 TrkA-C domain LI62_RS13235 PF03471 Transporter associated domain LI62_RS13240 PF00842 Alanine racemase, C-terminal domain LI62_RS13240 PF01168 Alanine racemase, N-terminal domain LI62_RS13245 PF01266 FAD dependent oxidoreductase LI62_RS13255 PF04293 LI62_RS13255 LI62_RS13260 PF00392 Bacterial regulatory proteins, gntR family LI62_RS13260 PF07840 FadR C-terminal domain LI62_RS13265 PF06450 LI62_RS13265 LI62_RS13270 PF02600 Disulfide bond formation protein DsbB LI62_RS13275 PF03692 LI62_RS13275 LI62_RS13280 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI62_RS13285 PF05166 YcgL domain LI62_RS13290 PF03775 Septum formation inhibitor MinC, C-terminal domain LI62_RS13290 PF05209 Septum formation inhibitor MinC, N-terminal domain LI62_RS13295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI62_RS13300 PF03776 Septum formation topological specificity factor MinE LI62_RS13305 PF00570 HRDC domain LI62_RS13305 PF01612 3'-5' exonuclease LI62_RS13310 PF00501 AMP-binding enzyme LI62_RS13310 PF13193 AMP-binding enzyme C-terminal domain LI62_RS13315 PF03843 LI62_RS13315 LI62_RS13320 PF00814 Glycoprotease family LI62_RS13325 PF00270 DEAD/DEAH box helicase LI62_RS13325 PF06733 DEAD_2 LI62_RS13325 PF13307 Helicase C-terminal domain LI62_RS13330 PF01042 Endoribonuclease L-PSP LI62_RS13335 PF03701 LI62_RS13335 LI62_RS13340 PF00425 chorismate binding enzyme LI62_RS13340 PF04715 Anthranilate synthase component I, N terminal region LI62_RS13345 PF00293 NUDIX domain LI62_RS13350 PF03313 LI62_RS13350 LI62_RS13350 PF03315 Serine dehydratase beta chain LI62_RS13355 PF00563 EAL domain LI62_RS13355 PF12792 LI62_RS13355 LI62_RS13360 PF03471 Transporter associated domain LI62_RS13360 PF03741 LI62_RS13360 LI62_RS13365 PF03610 PTS system fructose IIA component LI62_RS13365 PF03830 PTS system sorbose subfamily IIB component LI62_RS13370 PF03609 LI62_RS13370 LI62_RS13375 PF03613 LI62_RS13375 LI62_RS13380 PF06173 LI62_RS13380 LI62_RS13385 PF02659 LI62_RS13385 LI62_RS13390 PF08241 Methyltransferase domain LI62_RS13395 PF00905 Penicillin binding protein transpeptidase domain LI62_RS13395 PF03717 Penicillin-binding Protein dimerisation domain LI62_RS13400 PF00313 'Cold-shock' DNA-binding domain LI62_RS13405 PF10736 LI62_RS13405 LI62_RS13410 PF13974 LI62_RS13410 LI62_RS13415 PF13998 LI62_RS13415 LI62_RS13420 PF13996 LI62_RS13420 LI62_RS13425 PF01614 Bacterial transcriptional regulator LI62_RS13425 PF09339 IclR helix-turn-helix domain LI62_RS13430 PF07690 Major Facilitator Superfamily LI62_RS13435 PF01435 Peptidase family M48 LI62_RS13440 PF00595 PDZ domain (Also known as DHR or GLGF) LI62_RS13440 PF03572 Peptidase family S41 LI62_RS13440 PF11818 LI62_RS13440 LI62_RS13445 PF04352 ProQ/FINO family LI62_RS13450 PF13185 GAF domain LI62_RS13455 PF04403 LI62_RS13455 LI62_RS13460 PF02470 LI62_RS13460 LI62_RS13465 PF01189 NOL1/NOP2/sun family LI62_RS13465 PF13636 pre-rRNA processing and ribosome biogenesis LI62_RS13465 PF17125 LI62_RS13465 LI62_RS13470 PF07351 LI62_RS13470 LI62_RS13475 PF00149 Calcineurin-like phosphoesterase LI62_RS13480 PF04393 LI62_RS13480 LI62_RS13490 PF10709 LI62_RS13490 LI62_RS13495 PF05425 LI62_RS13495 LI62_RS13500 PF04234 CopC domain LI62_RS13505 PF06440 DNA polymerase III, theta subunit LI62_RS13510 PF00795 Carbon-nitrogen hydrolase LI62_RS13515 PF00929 Exonuclease LI62_RS13520 PF00326 Prolyl oligopeptidase family LI62_RS13520 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LI62_RS13525 PF04391 LI62_RS13525 LI62_RS13530 PF01370 NAD dependent epimerase/dehydratase family LI62_RS13530 PF02222 ATP-grasp domain LI62_RS13535 PF01081 KDPG and KHG aldolase LI62_RS13540 PF00920 Dehydratase family LI62_RS13545 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LI62_RS13545 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LI62_RS13550 PF01380 SIS domain LI62_RS13550 PF01418 Helix-turn-helix domain, rpiR family LI62_RS13555 PF00224 Pyruvate kinase, barrel domain LI62_RS13555 PF02887 Pyruvate kinase, alpha/beta domain LI62_RS13560 PF03279 LI62_RS13560 LI62_RS13565 PF01551 Peptidase family M23 LI62_RS13565 PF04225 Opacity-associated protein A LysM-like domain LI62_RS13565 PF08525 LI62_RS13565 LI62_RS13570 PF01297 Periplasmic solute binding protein family LI62_RS13575 PF00005 ABC transporter LI62_RS13580 PF00950 LI62_RS13580 LI62_RS13585 PF05491 Holliday junction DNA helicase ruvB C-terminus LI62_RS13585 PF05496 Holliday junction DNA helicase ruvB N-terminus LI62_RS13590 PF01330 RuvA N terminal domain LI62_RS13590 PF07499 RuvA, C-terminal domain LI62_RS13590 PF14520 Helix-hairpin-helix domain LI62_RS13595 PF02075 Crossover junction endodeoxyribonuclease RuvC LI62_RS13600 PF01709 Transcriptional regulator LI62_RS13605 PF00293 NUDIX domain LI62_RS13610 PF00152 tRNA synthetases class II (D, K and N) LI62_RS13610 PF01336 OB-fold nucleic acid binding domain LI62_RS13610 PF02938 GAD domain LI62_RS13615 PF00857 Isochorismatase family LI62_RS13620 PF01904 Protein of unknown function DUF72 LI62_RS13625 PF01124 MAPEG family LI62_RS13630 PF13649 Methyltransferase domain LI62_RS13635 PF08003 Protein of unknown function (DUF1698) LI62_RS13640 PF03932 CutC family LI62_RS13645 PF06185 YecM protein LI62_RS13650 PF00750 tRNA synthetases class I (R) LI62_RS13650 PF03485 Arginyl tRNA synthetase N terminal domain LI62_RS13650 PF05746 DALR anticodon binding domain LI62_RS13655 PF07470 Glycosyl Hydrolase Family 88 LI62_RS13660 PF13347 MFS/sugar transport protein LI62_RS13665 PF06366 LI62_RS13665 LI62_RS13670 PF00771 FHIPEP family LI62_RS13675 PF01312 FlhB HrpN YscU SpaS Family LI62_RS13680 PF04344 Chemotaxis phosphatase, CheZ LI62_RS13685 PF00072 Response regulator receiver domain LI62_RS13690 PF00072 Response regulator receiver domain LI62_RS13690 PF01339 CheB methylesterase LI62_RS13695 PF01739 CheR methyltransferase, SAM binding domain LI62_RS13695 PF03705 CheR methyltransferase, all-alpha domain LI62_RS13700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS13700 PF00672 HAMP domain LI62_RS13700 PF02203 Tar ligand binding domain homologue LI62_RS13705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS13705 PF00672 HAMP domain LI62_RS13705 PF02203 Tar ligand binding domain homologue LI62_RS13710 PF05229 LI62_RS13710 LI62_RS13715 PF00577 Outer membrane usher protein LI62_RS13715 PF13953 PapC C-terminal domain LI62_RS13720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS13725 PF05229 LI62_RS13725 LI62_RS13730 PF05229 LI62_RS13730 LI62_RS13735 PF00375 Sodium:dicarboxylate symporter family LI62_RS13740 PF01584 CheW-like domain LI62_RS13745 PF01584 CheW-like domain LI62_RS13745 PF01627 Hpt domain LI62_RS13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS13745 PF02895 Signal transducing histidine kinase, homodimeric domain LI62_RS13745 PF09078 CheY binding LI62_RS13750 PF00691 OmpA family LI62_RS13750 PF13677 LI62_RS13750 LI62_RS13755 PF01618 LI62_RS13755 LI62_RS13760 PF05280 Flagellar transcriptional activator (FlhC) LI62_RS13765 PF05247 Flagellar transcriptional activator (FlhD) LI62_RS13770 PF00582 Universal stress protein family LI62_RS13775 PF00982 Glycosyltransferase family 20 LI62_RS13780 PF02358 Trehalose-phosphatase LI62_RS13785 PF02653 LI62_RS13785 LI62_RS13790 PF00005 ABC transporter LI62_RS13795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS13800 PF01965 DJ-1/PfpI family LI62_RS13805 PF00210 Ferritin-like domain LI62_RS13810 PF03605 LI62_RS13810 LI62_RS13815 PF10964 LI62_RS13815 LI62_RS13820 PF07690 Major Facilitator Superfamily LI62_RS13825 PF02502 Ribose/Galactose Isomerase LI62_RS13825 PF12408 Ribose-5-phosphate isomerase LI62_RS13830 PF13992 LI62_RS13830 LI62_RS13835 PF00210 Ferritin-like domain LI62_RS13840 PF10678 LI62_RS13840 LI62_RS13845 PF03222 Tryptophan/tyrosine permease family LI62_RS13850 PF02810 SEC-C motif LI62_RS13850 PF03695 Uncharacterised protein family (UPF0149) LI62_RS13855 PF13458 Periplasmic binding protein LI62_RS13860 PF02653 LI62_RS13860 LI62_RS13865 PF02653 LI62_RS13865 LI62_RS13865 PF11862 LI62_RS13865 LI62_RS13870 PF00005 ABC transporter LI62_RS13870 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI62_RS13875 PF00005 ABC transporter LI62_RS13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS13885 PF03466 LysR substrate binding domain LI62_RS13895 PF13988 LI62_RS13895 LI62_RS13915 PF01066 CDP-alcohol phosphatidyltransferase LI62_RS13920 PF01541 GIY-YIG catalytic domain LI62_RS13920 PF02151 UvrB/uvrC motif LI62_RS13920 PF08459 UvrC Helix-hairpin-helix N-terminal LI62_RS13920 PF14520 Helix-hairpin-helix domain LI62_RS13925 PF00072 Response regulator receiver domain LI62_RS13925 PF00196 Bacterial regulatory proteins, luxR family LI62_RS13930 PF10769 LI62_RS13930 LI62_RS13935 PF00196 Bacterial regulatory proteins, luxR family LI62_RS13935 PF03472 Autoinducer binding domain LI62_RS13940 PF00005 ABC transporter LI62_RS13945 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS13950 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS13955 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS13960 PF02899 Phage integrase, N-terminal SAM-like domain LI62_RS13965 PF04539 Sigma-70 region 3 LI62_RS13965 PF04542 Sigma-70 region 2 LI62_RS13965 PF04545 Sigma-70, region 4 LI62_RS13970 PF00669 Bacterial flagellin N-terminal helical region LI62_RS13970 PF00700 Bacterial flagellin C-terminal helical region LI62_RS13970 PF12445 LI62_RS13970 LI62_RS13975 PF02465 LI62_RS13975 LI62_RS13975 PF07195 LI62_RS13975 LI62_RS13980 PF02561 Flagellar protein FliS LI62_RS13985 PF05400 Flagellar protein FliT LI62_RS13990 PF00128 Alpha amylase, catalytic domain LI62_RS13995 PF13987 YedD-like protein LI62_RS14000 PF02049 LI62_RS14000 LI62_RS14005 PF01514 Secretory protein of YscJ/FliF family LI62_RS14005 PF08345 LI62_RS14005 LI62_RS14010 PF01706 FliG C-terminal domain LI62_RS14010 PF14841 FliG middle domain LI62_RS14010 PF14842 FliG N-terminal domain LI62_RS14015 PF02108 LI62_RS14015 LI62_RS14020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI62_RS14025 PF02050 Flagellar FliJ protein LI62_RS14030 PF02120 Flagellar hook-length control protein FliK LI62_RS14035 PF03748 LI62_RS14035 LI62_RS14040 PF01052 Surface presentation of antigens (SPOA) LI62_RS14040 PF02154 Flagellar motor switch protein FliM LI62_RS14045 PF01052 Surface presentation of antigens (SPOA) LI62_RS14045 PF16973 LI62_RS14045 LI62_RS14050 PF04347 LI62_RS14050 LI62_RS14055 PF00813 LI62_RS14055 LI62_RS14060 PF01313 LI62_RS14060 LI62_RS14065 PF01311 LI62_RS14065 LI62_RS14070 PF00196 Bacterial regulatory proteins, luxR family LI62_RS14075 PF10781 LI62_RS14075 LI62_RS14080 PF10733 LI62_RS14080 LI62_RS14085 PF08282 haloacid dehalogenase-like hydrolase LI62_RS14090 PF00990 GGDEF domain LI62_RS14090 PF17151 LI62_RS14090 LI62_RS14095 PF09926 LI62_RS14095 LI62_RS14100 PF05661 LI62_RS14100 LI62_RS14105 PF00892 EamA-like transporter family LI62_RS14110 PF03852 DNA mismatch endonuclease Vsr LI62_RS14115 PF00145 C-5 cytosine-specific DNA methylase LI62_RS14120 PF01966 HD domain LI62_RS14125 PF00267 Gram-negative porin LI62_RS14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS14135 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LI62_RS14135 PF17203 LI62_RS14135 LI62_RS14140 PF00072 Response regulator receiver domain LI62_RS14145 PF02424 ApbE family LI62_RS14150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI62_RS14150 PF00890 FAD binding domain LI62_RS14150 PF04205 FMN-binding domain LI62_RS14155 PF00939 Sodium:sulfate symporter transmembrane region LI62_RS14160 PF05681 LI62_RS14160 LI62_RS14160 PF05683 Fumarase C-terminus LI62_RS14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS14165 PF03466 LysR substrate binding domain LI62_RS14170 PF00144 Beta-lactamase LI62_RS14175 PF00083 Sugar (and other) transporter LI62_RS14180 PF13531 Bacterial extracellular solute-binding protein LI62_RS14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS14185 PF03466 LysR substrate binding domain LI62_RS14190 PF06167 Glucose-regulated metallo-peptidase M90 LI62_RS14195 PF07690 Major Facilitator Superfamily LI62_RS14200 PF04183 IucA / IucC family LI62_RS14200 PF06276 Ferric iron reductase FhuF-like transporter LI62_RS14205 PF13523 Acetyltransferase (GNAT) domain LI62_RS14210 PF04183 IucA / IucC family LI62_RS14210 PF06276 Ferric iron reductase FhuF-like transporter LI62_RS14220 PF00593 TonB dependent receptor LI62_RS14220 PF07715 TonB-dependent Receptor Plug Domain LI62_RS14230 PF13744 Helix-turn-helix domain LI62_RS14235 PF05973 LI62_RS14235 LI62_RS14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS14240 PF03466 LysR substrate binding domain LI62_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS14245 PF03466 LysR substrate binding domain LI62_RS14255 PF03734 L,D-transpeptidase catalytic domain LI62_RS14260 PF00122 E1-E2 ATPase LI62_RS14260 PF00689 Cation transporting ATPase, C-terminus LI62_RS14260 PF00690 Cation transporter/ATPase, N-terminus LI62_RS14260 PF00702 haloacid dehalogenase-like hydrolase LI62_RS14260 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit LI62_RS14265 PF00582 Universal stress protein family LI62_RS14270 PF16576 LI62_RS14270 LI62_RS14275 PF00873 AcrB/AcrD/AcrF family LI62_RS14285 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LI62_RS14290 PF00083 Sugar (and other) transporter LI62_RS14295 PF01048 Phosphorylase superfamily LI62_RS14295 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LI62_RS14305 PF01554 MatE LI62_RS14315 PF04363 LI62_RS14315 LI62_RS14320 PF04632 LI62_RS14320 LI62_RS14325 PF06445 GyrI-like small molecule binding domain LI62_RS14330 PF00768 D-alanyl-D-alanine carboxypeptidase LI62_RS14330 PF07943 Penicillin-binding protein 5, C-terminal domain LI62_RS14335 PF00929 Exonuclease LI62_RS14335 PF08411 Exonuclease C-terminal LI62_RS14340 PF13520 Amino acid permease LI62_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS14345 PF03466 LysR substrate binding domain LI62_RS14350 PF01370 NAD dependent epimerase/dehydratase family LI62_RS14355 PF01634 ATP phosphoribosyltransferase LI62_RS14355 PF08029 HisG, C-terminal domain LI62_RS14360 PF00815 Histidinol dehydrogenase LI62_RS14365 PF00155 Aminotransferase class I and II LI62_RS14370 PF00475 Imidazoleglycerol-phosphate dehydratase LI62_RS14370 PF13242 HAD-hyrolase-like LI62_RS14375 PF00117 Glutamine amidotransferase class-I LI62_RS14380 PF00977 Histidine biosynthesis protein LI62_RS14385 PF00977 Histidine biosynthesis protein LI62_RS14390 PF01502 Phosphoribosyl-AMP cyclohydrolase LI62_RS14390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LI62_RS14395 PF02706 Chain length determinant protein LI62_RS14400 PF16363 LI62_RS14400 LI62_RS14405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LI62_RS14405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LI62_RS14405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LI62_RS14410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LI62_RS14410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI62_RS14415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LI62_RS14420 PF14305 LI62_RS14420 LI62_RS14425 PF09587 Bacterial capsule synthesis protein PGA_cap LI62_RS14430 PF01943 LI62_RS14430 LI62_RS14450 PF04765 LI62_RS14450 LI62_RS14455 PF00535 Glycosyl transferase family 2 LI62_RS14460 PF14897 LI62_RS14460 LI62_RS14465 PF00483 Nucleotidyl transferase LI62_RS14470 PF04321 RmlD substrate binding domain LI62_RS14475 PF16363 LI62_RS14475 LI62_RS14480 PF00483 Nucleotidyl transferase LI62_RS14490 PF00534 Glycosyl transferases group 1 LI62_RS14490 PF13439 Glycosyltransferase Family 4 LI62_RS14495 PF04230 LI62_RS14495 LI62_RS14500 PF13440 LI62_RS14500 LI62_RS14505 PF02397 LI62_RS14505 LI62_RS14505 PF13727 CoA-binding domain LI62_RS14510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI62_RS14510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI62_RS14510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI62_RS14510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI62_RS14515 PF00483 Nucleotidyl transferase LI62_RS14515 PF01050 Mannose-6-phosphate isomerase LI62_RS14520 PF00534 Glycosyl transferases group 1 LI62_RS14520 PF13579 Glycosyl transferase 4-like domain LI62_RS14525 PF00293 NUDIX domain LI62_RS14530 PF01370 NAD dependent epimerase/dehydratase family LI62_RS14535 PF16363 LI62_RS14535 LI62_RS14540 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS14545 PF00535 Glycosyl transferase family 2 LI62_RS14555 PF13439 Glycosyltransferase Family 4 LI62_RS14560 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS14565 PF00535 Glycosyl transferase family 2 LI62_RS14570 PF02706 Chain length determinant protein LI62_RS14570 PF13614 AAA domain LI62_RS14570 PF13807 LI62_RS14570 LI62_RS14575 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI62_RS14580 PF02563 Polysaccharide biosynthesis/export protein LI62_RS14580 PF10531 SLBB domain LI62_RS14585 PF00571 CBS domain LI62_RS14585 PF03471 Transporter associated domain LI62_RS14585 PF03741 LI62_RS14585 LI62_RS14590 PF05170 LI62_RS14590 LI62_RS14590 PF13502 LI62_RS14590 LI62_RS14595 PF00692 dUTPase LI62_RS14600 PF00485 Phosphoribulokinase / Uridine kinase family LI62_RS14605 PF00563 EAL domain LI62_RS14605 PF00989 PAS fold LI62_RS14605 PF00990 GGDEF domain LI62_RS14605 PF05231 LI62_RS14605 LI62_RS14605 PF08447 PAS fold LI62_RS14610 PF00730 HhH-GPD superfamily base excision DNA repair protein LI62_RS14610 PF06029 AlkA N-terminal domain LI62_RS14615 PF00012 Hsp70 protein LI62_RS14620 PF13437 HlyD family secretion protein LI62_RS14620 PF13533 Biotin-lipoyl like LI62_RS14625 PF00873 AcrB/AcrD/AcrF family LI62_RS14630 PF00873 AcrB/AcrD/AcrF family LI62_RS14635 PF07690 Major Facilitator Superfamily LI62_RS14640 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS14640 PF00672 HAMP domain LI62_RS14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS14645 PF00072 Response regulator receiver domain LI62_RS14645 PF00486 Transcriptional regulatory protein, C terminal LI62_RS14650 PF01136 LI62_RS14650 LI62_RS14650 PF16325 LI62_RS14650 LI62_RS14655 PF00781 Diacylglycerol kinase catalytic domain LI62_RS14660 PF00005 ABC transporter LI62_RS14665 PF00005 ABC transporter LI62_RS14670 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS14670 PF12911 LI62_RS14670 LI62_RS14675 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS14680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS14685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI62_RS14685 PF13378 Enolase C-terminal domain-like LI62_RS14690 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS14695 PF07690 Major Facilitator Superfamily LI62_RS14700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS14700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS14705 PF01232 Mannitol dehydrogenase Rossmann domain LI62_RS14705 PF08125 Mannitol dehydrogenase C-terminal domain LI62_RS14710 PF04198 Putative sugar-binding domain LI62_RS14710 PF13384 Homeodomain-like domain LI62_RS14715 PF00356 Bacterial regulatory proteins, lacI family LI62_RS14715 PF13407 Periplasmic binding protein domain LI62_RS14720 PF00106 short chain dehydrogenase LI62_RS14725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS14725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS14730 PF07690 Major Facilitator Superfamily LI62_RS14735 PF01791 DeoC/LacD family aldolase LI62_RS14740 PF03825 LI62_RS14740 LI62_RS14745 PF03747 ADP-ribosylglycohydrolase LI62_RS14750 PF00294 pfkB family carbohydrate kinase LI62_RS14755 PF00392 Bacterial regulatory proteins, gntR family LI62_RS14755 PF07702 UTRA domain LI62_RS14760 PF08543 Phosphomethylpyrimidine kinase LI62_RS14765 PF02110 Hydroxyethylthiazole kinase family LI62_RS14770 PF00563 EAL domain LI62_RS14785 PF03864 Phage major capsid protein E LI62_RS14820 PF00589 Phage integrase family LI62_RS14825 PF13391 LI62_RS14825 LI62_RS14830 PF00589 Phage integrase family LI62_RS14835 PF01391 Collagen triple helix repeat (20 copies) LI62_RS14835 PF03895 YadA-like C-terminal region LI62_RS14845 PF00202 Aminotransferase class-III LI62_RS14850 PF00282 Pyridoxal-dependent decarboxylase conserved domain LI62_RS14855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LI62_RS14855 PF02706 Chain length determinant protein LI62_RS14855 PF13807 LI62_RS14855 LI62_RS14860 PF01451 Low molecular weight phosphotyrosine protein phosphatase LI62_RS14865 PF02563 Polysaccharide biosynthesis/export protein LI62_RS14865 PF10531 SLBB domain LI62_RS14870 PF11776 Domain of unknown function (DUF3315) LI62_RS14875 PF13508 Acetyltransferase (GNAT) domain LI62_RS14880 PF10609 ParA/MinD ATPase like LI62_RS14885 PF01588 Putative tRNA binding domain LI62_RS14885 PF09334 tRNA synthetases class I (M) LI62_RS14890 PF07308 LI62_RS14890 LI62_RS14895 PF00072 Response regulator receiver domain LI62_RS14895 PF04397 LytTr DNA-binding domain LI62_RS14900 PF06580 LI62_RS14900 LI62_RS14900 PF07694 5TMR of 5TMR-LYT LI62_RS14900 PF13185 GAF domain LI62_RS14905 PF13411 MerR HTH family regulatory protein LI62_RS14910 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS14915 PF00005 ABC transporter LI62_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS14925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI62_RS14930 PF00933 Glycosyl hydrolase family 3 N terminal domain LI62_RS14930 PF01915 Glycosyl hydrolase family 3 C-terminal domain LI62_RS14930 PF14310 Fibronectin type III-like domain LI62_RS14935 PF01565 FAD binding domain LI62_RS14935 PF09330 D-lactate dehydrogenase, membrane binding LI62_RS14940 PF13420 Acetyltransferase (GNAT) domain LI62_RS14945 PF00768 D-alanyl-D-alanine carboxypeptidase LI62_RS14950 PF06930 LI62_RS14950 LI62_RS14955 PF09335 LI62_RS14955 LI62_RS14960 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS14965 PF02321 Outer membrane efflux protein LI62_RS14970 PF01207 Dihydrouridine synthase (Dus) LI62_RS14975 PF03788 LI62_RS14975 LI62_RS14980 PF04172 LI62_RS14980 LI62_RS14985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LI62_RS14985 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LI62_RS14990 PF02698 DUF218 domain LI62_RS14995 PF02653 LI62_RS14995 LI62_RS15000 PF00005 ABC transporter LI62_RS15005 PF13407 Periplasmic binding protein domain LI62_RS15010 PF00356 Bacterial regulatory proteins, lacI family LI62_RS15010 PF13377 Periplasmic binding protein-like domain LI62_RS15015 PF04235 LI62_RS15015 LI62_RS15020 PF01227 GTP cyclohydrolase I LI62_RS15025 PF06779 LI62_RS15025 LI62_RS15030 PF00756 Putative esterase LI62_RS15035 PF00593 TonB dependent receptor LI62_RS15035 PF07715 TonB-dependent Receptor Plug Domain LI62_RS15040 PF00324 Amino acid permease LI62_RS15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS15045 PF03466 LysR substrate binding domain LI62_RS15050 PF03601 LI62_RS15050 LI62_RS15055 PF01261 Xylose isomerase-like TIM barrel LI62_RS15060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS15060 PF02378 Phosphotransferase system, EIIC LI62_RS15065 PF00294 pfkB family carbohydrate kinase LI62_RS15070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS15070 PF00381 PTS HPr component phosphorylation site LI62_RS15075 PF07690 Major Facilitator Superfamily LI62_RS15080 PF03692 LI62_RS15080 LI62_RS15085 PF01132 Elongation factor P (EF-P) OB domain LI62_RS15085 PF08207 Elongation factor P (EF-P) KOW-like domain LI62_RS15085 PF09285 Elongation factor P, C-terminal LI62_RS15090 PF03786 D-mannonate dehydratase (UxuA) LI62_RS15095 PF01232 Mannitol dehydrogenase Rossmann domain LI62_RS15095 PF08125 Mannitol dehydrogenase C-terminal domain LI62_RS15100 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI62_RS15100 PF07683 Cobalamin synthesis protein cobW C-terminal domain LI62_RS15105 PF01569 PAP2 superfamily LI62_RS15110 PF00877 NlpC/P60 family LI62_RS15115 PF00563 EAL domain LI62_RS15115 PF12792 LI62_RS15115 LI62_RS15120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LI62_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15130 PF12911 LI62_RS15130 LI62_RS15135 PF00005 ABC transporter LI62_RS15135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LI62_RS15140 PF13989 LI62_RS15140 LI62_RS15145 PF07690 Major Facilitator Superfamily LI62_RS15150 PF00849 RNA pseudouridylate synthase LI62_RS15150 PF01479 S4 domain LI62_RS15155 PF00271 Helicase conserved C-terminal domain LI62_RS15155 PF04851 Type III restriction enzyme, res subunit LI62_RS15160 PF01386 Ribosomal L25p family LI62_RS15165 PF04245 LI62_RS15165 LI62_RS15170 PF07208 Protein of unknown function (DUF1414) LI62_RS15175 PF00884 Sulfatase LI62_RS15175 PF11893 LI62_RS15175 LI62_RS15185 PF10749 LI62_RS15185 LI62_RS15190 PF03974 Ecotin LI62_RS15195 PF06039 LI62_RS15195 LI62_RS15200 PF00916 LI62_RS15200 LI62_RS15205 PF00571 CBS domain LI62_RS15205 PF01769 Divalent cation transporter LI62_RS15205 PF03448 MgtE intracellular N domain LI62_RS15210 PF00005 ABC transporter LI62_RS15215 PF13532 2OG-Fe(II) oxygenase superfamily LI62_RS15220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LI62_RS15220 PF02805 Metal binding domain of Ada LI62_RS15220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LI62_RS15220 PF12833 Helix-turn-helix domain LI62_RS15225 PF02424 ApbE family LI62_RS15230 PF00267 Gram-negative porin LI62_RS15235 PF01627 Hpt domain LI62_RS15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS15235 PF16359 LI62_RS15235 LI62_RS15240 PF00072 Response regulator receiver domain LI62_RS15240 PF00196 Bacterial regulatory proteins, luxR family LI62_RS15245 PF00072 Response regulator receiver domain LI62_RS15245 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS15245 PF09456 RcsC Alpha-Beta-Loop (ABL) LI62_RS15250 PF00521 DNA gyrase/topoisomerase IV, subunit A LI62_RS15250 PF03989 DNA gyrase C-terminal domain, beta-propeller LI62_RS15255 PF13489 Methyltransferase domain LI62_RS15260 PF00317 Ribonucleotide reductase, all-alpha domain LI62_RS15260 PF02867 Ribonucleotide reductase, barrel domain LI62_RS15260 PF03477 ATP cone domain LI62_RS15265 PF00268 Ribonucleotide reductase, small chain LI62_RS15270 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS15275 PF03009 Glycerophosphoryl diester phosphodiesterase family LI62_RS15280 PF07690 Major Facilitator Superfamily LI62_RS15285 PF01266 FAD dependent oxidoreductase LI62_RS15285 PF04324 BFD-like [2Fe-2S] binding domain LI62_RS15290 PF00890 FAD binding domain LI62_RS15295 PF02754 LI62_RS15295 LI62_RS15295 PF13183 4Fe-4S dicluster domain LI62_RS15300 PF00994 Probable molybdopterin binding domain LI62_RS15305 PF07437 LI62_RS15305 LI62_RS15310 PF00672 HAMP domain LI62_RS15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS15310 PF08521 LI62_RS15310 LI62_RS15315 PF00072 Response regulator receiver domain LI62_RS15315 PF00486 Transcriptional regulatory protein, C terminal LI62_RS15320 PF03401 Tripartite tricarboxylate transporter family receptor LI62_RS15325 PF07331 LI62_RS15325 LI62_RS15330 PF01970 LI62_RS15330 LI62_RS15335 PF00501 AMP-binding enzyme LI62_RS15335 PF13193 AMP-binding enzyme C-terminal domain LI62_RS15340 PF13378 Enolase C-terminal domain-like LI62_RS15345 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS15350 PF12697 Alpha/beta hydrolase family LI62_RS15355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS15355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS15355 PF16582 LI62_RS15355 LI62_RS15360 PF00425 chorismate binding enzyme LI62_RS15365 PF05957 LI62_RS15365 LI62_RS15370 PF13673 Acetyltransferase (GNAT) domain LI62_RS15375 PF12706 Beta-lactamase superfamily domain LI62_RS15380 PF00072 Response regulator receiver domain LI62_RS15380 PF01584 CheW-like domain LI62_RS15385 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LI62_RS15390 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LI62_RS15395 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LI62_RS15395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LI62_RS15400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LI62_RS15405 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LI62_RS15410 PF12838 4Fe-4S dicluster domain LI62_RS15415 PF00146 NADH dehydrogenase LI62_RS15420 PF00384 Molybdopterin oxidoreductase LI62_RS15420 PF01568 Molydopterin dinucleotide binding domain LI62_RS15420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS15420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI62_RS15420 PF13510 2Fe-2S iron-sulfur cluster binding domain LI62_RS15425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LI62_RS15425 PF10531 SLBB domain LI62_RS15425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI62_RS15430 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin LI62_RS15435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LI62_RS15435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LI62_RS15440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI62_RS15445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LI62_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS15450 PF03466 LysR substrate binding domain LI62_RS15455 PF00155 Aminotransferase class I and II LI62_RS15460 PF13023 HD domain LI62_RS15465 PF02080 TrkA-C domain LI62_RS15465 PF03600 Citrate transporter LI62_RS15470 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS15475 PF03887 YfbU domain LI62_RS15480 PF04217 LI62_RS15480 LI62_RS15485 PF00871 Acetokinase family LI62_RS15490 PF01515 Phosphate acetyl/butaryl transferase LI62_RS15490 PF07085 DRTGG domain LI62_RS15490 PF13500 AAA domain LI62_RS15495 PF02779 Transketolase, pyrimidine binding domain LI62_RS15495 PF02780 Transketolase, C-terminal domain LI62_RS15500 PF00456 Transketolase, thiamine diphosphate binding domain LI62_RS15505 PF03611 LI62_RS15505 LI62_RS15510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS15515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS15520 PF00356 Bacterial regulatory proteins, lacI family LI62_RS15520 PF13377 Periplasmic binding protein-like domain LI62_RS15525 PF00293 NUDIX domain LI62_RS15530 PF12850 Calcineurin-like phosphoesterase superfamily domain LI62_RS15535 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS15535 PF14834 Glutathione S-transferase, C-terminal domain LI62_RS15540 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS15540 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS15545 PF02152 Dihydroneopterin aldolase LI62_RS15550 PF01370 NAD dependent epimerase/dehydratase family LI62_RS15550 PF08338 Domain of unknown function (DUF1731) LI62_RS15555 PF13302 Acetyltransferase (GNAT) domain LI62_RS15560 PF00005 ABC transporter LI62_RS15565 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15570 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15575 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS15585 PF02441 Flavoprotein LI62_RS15590 PF00156 Phosphoribosyl transferase domain LI62_RS15590 PF13522 Glutamine amidotransferase domain LI62_RS15595 PF02674 LI62_RS15595 LI62_RS15600 PF05036 Sporulation related domain LI62_RS15605 PF02875 Mur ligase family, glutamate ligase domain LI62_RS15605 PF08245 Mur ligase middle domain LI62_RS15610 PF01039 Carboxyl transferase domain LI62_RS15615 PF09335 LI62_RS15615 LI62_RS15620 PF01416 tRNA pseudouridine synthase LI62_RS15625 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI62_RS15625 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI62_RS15630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI62_RS15630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI62_RS15630 PF11890 Domain of unknown function (DUF3410) LI62_RS15640 PF07690 Major Facilitator Superfamily LI62_RS15645 PF00109 Beta-ketoacyl synthase, N-terminal domain LI62_RS15645 PF02801 Beta-ketoacyl synthase, C-terminal domain LI62_RS15650 PF01266 FAD dependent oxidoreductase LI62_RS15650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LI62_RS15655 PF08891 LI62_RS15655 LI62_RS15660 PF04315 LI62_RS15660 LI62_RS15665 PF01925 LI62_RS15665 LI62_RS15670 PF03411 Penicillin-insensitive murein endopeptidase LI62_RS15675 PF01264 Chorismate synthase LI62_RS15680 PF05175 Methyltransferase small domain LI62_RS15685 PF01713 Smr domain LI62_RS15690 PF00300 Histidine phosphatase superfamily (branch 1) LI62_RS15695 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS15695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI62_RS15695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI62_RS15700 PF00108 Thiolase, N-terminal domain LI62_RS15700 PF02803 Thiolase, C-terminal domain LI62_RS15705 PF04175 Protein of unknown function (DUF406) LI62_RS15710 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LI62_RS15715 PF04333 LI62_RS15715 LI62_RS15720 PF01226 Formate/nitrite transporter LI62_RS15735 PF03279 LI62_RS15735 LI62_RS15745 PF00155 Aminotransferase class I and II LI62_RS15750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS15750 PF06580 LI62_RS15750 LI62_RS15750 PF07694 5TMR of 5TMR-LYT LI62_RS15755 PF00072 Response regulator receiver domain LI62_RS15755 PF04397 LytTr DNA-binding domain LI62_RS15760 PF02685 Glucokinase LI62_RS15765 PF00654 Voltage gated chloride channel LI62_RS15770 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS15770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS15770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS15775 PF00248 Aldo/keto reductase family LI62_RS15780 PF10697 LI62_RS15780 LI62_RS15785 PF01566 LI62_RS15785 LI62_RS15790 PF01773 Na+ dependent nucleoside transporter N-terminus LI62_RS15790 PF07662 Na+ dependent nucleoside transporter C-terminus LI62_RS15790 PF07670 Nucleoside recognition LI62_RS15795 PF00563 EAL domain LI62_RS15795 PF00990 GGDEF domain LI62_RS15795 PF05231 LI62_RS15795 LI62_RS15810 PF07037 LI62_RS15810 LI62_RS15815 PF07037 LI62_RS15815 LI62_RS15820 PF00749 tRNA synthetases class I (E and Q), catalytic domain LI62_RS15845 PF14282 LI62_RS15845 LI62_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS15850 PF03466 LysR substrate binding domain LI62_RS15855 PF13593 SBF-like CPA transporter family (DUF4137) LI62_RS15860 PF12843 LI62_RS15860 LI62_RS15865 PF00533 BRCA1 C Terminus (BRCT) domain LI62_RS15865 PF01653 NAD-dependent DNA ligase adenylation domain LI62_RS15865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LI62_RS15865 PF03120 NAD-dependent DNA ligase OB-fold domain LI62_RS15865 PF12826 Helix-hairpin-helix motif LI62_RS15865 PF14520 Helix-hairpin-helix domain LI62_RS15870 PF04354 ZipA, C-terminal FtsZ-binding domain LI62_RS15875 PF07264 Etoposide-induced protein 2 LI62_RS15880 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS15885 PF00381 PTS HPr component phosphorylation site LI62_RS15890 PF00391 PEP-utilising enzyme, mobile domain LI62_RS15890 PF02896 PEP-utilising enzyme, TIM barrel domain LI62_RS15890 PF05524 PEP-utilising enzyme, N-terminal LI62_RS15895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LI62_RS15900 PF08543 Phosphomethylpyrimidine kinase LI62_RS15905 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS15910 PF00005 ABC transporter LI62_RS15910 PF12857 LI62_RS15910 LI62_RS15915 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15920 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS15925 PF13531 Bacterial extracellular solute-binding protein LI62_RS15930 PF04261 Dyp-type peroxidase family LI62_RS15935 PF06572 Protein of unknown function (DUF1131) LI62_RS15940 PF11143 LI62_RS15940 LI62_RS15945 PF00583 Acetyltransferase (GNAT) family LI62_RS15950 PF01520 N-acetylmuramoyl-L-alanine amidase LI62_RS15955 PF01218 Coproporphyrinogen III oxidase LI62_RS15960 PF00390 Malic enzyme, N-terminal domain LI62_RS15960 PF01515 Phosphate acetyl/butaryl transferase LI62_RS15960 PF03949 Malic enzyme, NAD binding domain LI62_RS15965 PF00923 Transaldolase LI62_RS15970 PF00456 Transketolase, thiamine diphosphate binding domain LI62_RS15970 PF02779 Transketolase, pyrimidine binding domain LI62_RS15970 PF02780 Transketolase, C-terminal domain LI62_RS15975 PF01588 Putative tRNA binding domain LI62_RS15980 PF00356 Bacterial regulatory proteins, lacI family LI62_RS15980 PF13377 Periplasmic binding protein-like domain LI62_RS15985 PF00703 Glycosyl hydrolases family 2 LI62_RS15985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LI62_RS15985 PF02837 Glycosyl hydrolases family 2, sugar binding domain LI62_RS15985 PF02929 Beta galactosidase small chain LI62_RS15985 PF16353 LI62_RS15985 LI62_RS15990 PF04074 Domain of unknown function (DUF386) LI62_RS15995 PF13520 Amino acid permease LI62_RS16005 PF01204 Trehalase LI62_RS16010 PF06674 LI62_RS16010 LI62_RS16015 PF00293 NUDIX domain LI62_RS16020 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS16020 PF13247 4Fe-4S dicluster domain LI62_RS16020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI62_RS16030 PF00672 HAMP domain LI62_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS16030 PF07730 Histidine kinase LI62_RS16030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LI62_RS16035 PF00873 AcrB/AcrD/AcrF family LI62_RS16040 PF03960 ArsC family LI62_RS16045 PF01546 Peptidase family M20/M25/M40 LI62_RS16045 PF07687 Peptidase dimerisation domain LI62_RS16050 PF13980 LI62_RS16050 LI62_RS16055 PF02230 Phospholipase/Carboxylesterase LI62_RS16060 PF05127 Helicase LI62_RS16060 PF08351 Domain of unknown function (DUF1726) LI62_RS16060 PF13718 GNAT acetyltransferase 2 LI62_RS16060 PF17176 LI62_RS16060 LI62_RS16065 PF04228 LI62_RS16065 LI62_RS16070 PF01259 SAICAR synthetase LI62_RS16075 PF06804 NlpB/DapX lipoprotein LI62_RS16080 PF00701 Dihydrodipicolinate synthetase family LI62_RS16085 PF01842 ACT domain LI62_RS16085 PF13740 ACT domain LI62_RS16090 PF00578 AhpC/TSA family LI62_RS16095 PF01594 LI62_RS16095 LI62_RS16100 PF01435 Peptidase family M48 LI62_RS16100 PF14559 Tetratricopeptide repeat LI62_RS16105 PF03960 ArsC family LI62_RS16115 PF02378 Phosphotransferase system, EIIC LI62_RS16120 PF01112 Asparaginase LI62_RS16125 PF00883 Cytosol aminopeptidase family, catalytic domain LI62_RS16130 PF00308 Bacterial dnaA protein LI62_RS16135 PF00860 Permease family LI62_RS16140 PF14681 Uracil phosphoribosyltransferase LI62_RS16145 PF00232 Glycosyl hydrolase family 1 LI62_RS16150 PF00586 AIR synthase related protein, N-terminal domain LI62_RS16150 PF02769 AIR synthase related protein, C-terminal domain LI62_RS16155 PF00551 Formyl transferase LI62_RS16160 PF02503 Polyphosphate kinase middle domain LI62_RS16160 PF13089 Polyphosphate kinase N-terminal domain LI62_RS16160 PF13090 Polyphosphate kinase C-terminal domain LI62_RS16165 PF02541 Ppx/GppA phosphatase family LI62_RS16170 PF00563 EAL domain LI62_RS16170 PF05231 LI62_RS16170 LI62_RS16180 PF12697 Alpha/beta hydrolase family LI62_RS16185 PF06629 LI62_RS16185 LI62_RS16190 PF00072 Response regulator receiver domain LI62_RS16190 PF00486 Transcriptional regulatory protein, C terminal LI62_RS16195 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS16195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS16200 PF02082 Transcriptional regulator LI62_RS16205 PF00873 AcrB/AcrD/AcrF family LI62_RS16210 PF16576 LI62_RS16210 LI62_RS16215 PF12833 Helix-turn-helix domain LI62_RS16220 PF10721 LI62_RS16220 LI62_RS16225 PF00182 Chitinase class I LI62_RS16230 PF05449 LI62_RS16230 LI62_RS16235 PF16931 LI62_RS16235 LI62_RS16240 PF01943 LI62_RS16240 LI62_RS16325 PF12236 Bacteriophage head to tail connecting protein LI62_RS16345 PF03592 Terminase small subunit LI62_RS16380 PF13935 LI62_RS16380 LI62_RS16395 PF02075 Crossover junction endodeoxyribonuclease RuvC LI62_RS16400 PF06992 LI62_RS16400 LI62_RS16420 PF01381 Helix-turn-helix LI62_RS16430 PF09588 YqaJ-like viral recombinase domain LI62_RS16435 PF03837 LI62_RS16435 LI62_RS16440 PF05930 Prophage CP4-57 regulatory protein (AlpA) LI62_RS16445 PF06069 LI62_RS16445 LI62_RS16450 PF07131 LI62_RS16450 LI62_RS16455 PF05063 LI62_RS16455 LI62_RS16460 PF00589 Phage integrase family LI62_RS16460 PF13356 Domain of unknown function (DUF4102) LI62_RS16460 PF14659 Phage integrase, N-terminal SAM-like domain LI62_RS16465 PF00117 Glutamine amidotransferase class-I LI62_RS16465 PF00958 GMP synthase C terminal domain LI62_RS16465 PF02540 NAD synthase LI62_RS16470 PF00478 IMP dehydrogenase / GMP reductase domain LI62_RS16470 PF00571 CBS domain LI62_RS16475 PF02601 LI62_RS16475 LI62_RS16475 PF13742 LI62_RS16475 LI62_RS16480 PF01447 Thermolysin metallopeptidase, catalytic domain LI62_RS16480 PF02868 Thermolysin metallopeptidase, alpha-helical domain LI62_RS16480 PF16485 LI62_RS16480 LI62_RS16490 PF07191 zinc-ribbons LI62_RS16495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS16500 PF00854 POT family LI62_RS16505 PF01926 50S ribosome-binding GTPase LI62_RS16505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LI62_RS16510 PF13360 PQQ-like domain LI62_RS16515 PF09976 Tetratricopeptide repeat LI62_RS16520 PF03129 Anticodon binding domain LI62_RS16520 PF13393 Histidyl-tRNA synthetase LI62_RS16525 PF04551 GcpE protein LI62_RS16530 PF13413 Helix-turn-helix domain LI62_RS16530 PF13464 LI62_RS16530 LI62_RS16535 PF04055 Radical SAM superfamily LI62_RS16540 PF00334 Nucleoside diphosphate kinase LI62_RS16545 PF00037 4Fe-4S binding domain LI62_RS16545 PF12838 4Fe-4S dicluster domain LI62_RS16550 PF04976 LI62_RS16550 LI62_RS16555 PF12800 4Fe-4S binding domain LI62_RS16555 PF13247 4Fe-4S dicluster domain LI62_RS16560 PF00384 Molybdopterin oxidoreductase LI62_RS16560 PF01568 Molydopterin dinucleotide binding domain LI62_RS16560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS16565 PF00905 Penicillin binding protein transpeptidase domain LI62_RS16565 PF00912 Transglycosylase LI62_RS16565 PF06832 LI62_RS16565 LI62_RS16570 PF00207 Alpha-2-macroglobulin family LI62_RS16570 PF01835 MG2 domain LI62_RS16570 PF07678 A-macroglobulin complement component LI62_RS16570 PF07703 Alpha-2-macroglobulin family N-terminal region LI62_RS16570 PF10569 Alpha-macro-globulin thiol-ester bond-forming region LI62_RS16570 PF11974 Alpha-2-macroglobulin MG1 domain LI62_RS16575 PF00367 phosphotransferase system, EIIB LI62_RS16575 PF02378 Phosphotransferase system, EIIC LI62_RS16580 PF02056 Family 4 glycosyl hydrolase LI62_RS16580 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI62_RS16585 PF00581 Rhodanese-like domain LI62_RS16590 PF01380 SIS domain LI62_RS16590 PF01418 Helix-turn-helix domain, rpiR family LI62_RS16595 PF07179 LI62_RS16595 LI62_RS16595 PF14581 LI62_RS16595 LI62_RS16600 PF00883 Cytosol aminopeptidase family, catalytic domain LI62_RS16600 PF12404 LI62_RS16600 LI62_RS16605 PF04384 Iron-sulphur cluster assembly LI62_RS16610 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS16615 PF00012 Hsp70 protein LI62_RS16620 PF07743 HSCB C-terminal oligomerisation domain LI62_RS16625 PF01521 Iron-sulphur cluster biosynthesis LI62_RS16630 PF01592 NifU-like N terminal domain LI62_RS16635 PF00266 Aminotransferase class-V LI62_RS16640 PF02082 Transcriptional regulator LI62_RS16645 PF00588 SpoU rRNA Methylase family LI62_RS16650 PF00459 Inositol monophosphatase family LI62_RS16655 PF03824 LI62_RS16655 LI62_RS16660 PF06226 LI62_RS16660 LI62_RS16665 PF00874 PRD domain LI62_RS16670 PF12832 MFS_1 like family LI62_RS16675 PF07681 LI62_RS16675 LI62_RS16680 PF00464 Serine hydroxymethyltransferase LI62_RS16690 PF00042 Globin LI62_RS16690 PF00175 Oxidoreductase NAD-binding domain LI62_RS16690 PF00970 Oxidoreductase FAD-binding domain LI62_RS16695 PF00543 Nitrogen regulatory protein P-II LI62_RS16700 PF00072 Response regulator receiver domain LI62_RS16700 PF00158 Sigma-54 interaction domain LI62_RS16705 PF13942 LI62_RS16705 LI62_RS16710 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS16710 PF00672 HAMP domain LI62_RS16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS16715 PF02769 AIR synthase related protein, C-terminal domain LI62_RS16715 PF13507 CobB/CobQ-like glutamine amidotransferase domain LI62_RS16720 PF00497 Bacterial extracellular solute-binding proteins, family 3 LI62_RS16720 PF01464 Transglycosylase SLT domain LI62_RS16725 PF14437 LI62_RS16725 LI62_RS16730 PF12710 haloacid dehalogenase-like hydrolase LI62_RS16735 PF00367 phosphotransferase system, EIIB LI62_RS16735 PF02378 Phosphotransferase system, EIIC LI62_RS16740 PF01380 SIS domain LI62_RS16745 PF01380 SIS domain LI62_RS16745 PF01418 Helix-turn-helix domain, rpiR family LI62_RS16750 PF00037 4Fe-4S binding domain LI62_RS16755 PF01648 4'-phosphopantetheinyl transferase superfamily LI62_RS16760 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LI62_RS16765 PF02565 Recombination protein O C terminal LI62_RS16765 PF11967 Recombination protein O N terminal LI62_RS16770 PF01926 50S ribosome-binding GTPase LI62_RS16770 PF07650 KH domain LI62_RS16775 PF00035 Double-stranded RNA binding motif LI62_RS16775 PF14622 Ribonuclease-III-like LI62_RS16780 PF00717 Peptidase S24-like LI62_RS16780 PF10502 Signal peptidase, peptidase S26 LI62_RS16785 PF00009 Elongation factor Tu GTP binding domain LI62_RS16785 PF00679 Elongation factor G C-terminus LI62_RS16785 PF03144 Elongation factor Tu domain 2 LI62_RS16785 PF06421 GTP-binding protein LepA C-terminus LI62_RS16790 PF04246 LI62_RS16790 LI62_RS16795 PF03888 MucB/RseB family LI62_RS16795 PF17188 LI62_RS16795 LI62_RS16800 PF03872 Anti sigma-E protein RseA, N-terminal domain LI62_RS16800 PF03873 Anti sigma-E protein RseA, C-terminal domain LI62_RS16805 PF04542 Sigma-70 region 2 LI62_RS16805 PF08281 Sigma-70, region 4 LI62_RS16810 PF00890 FAD binding domain LI62_RS16810 PF02910 Fumarate reductase flavoprotein C-term LI62_RS16815 PF05175 Methyltransferase small domain LI62_RS16820 PF00270 DEAD/DEAH box helicase LI62_RS16820 PF00271 Helicase conserved C-terminal domain LI62_RS16825 PF01228 Glycine radical LI62_RS16830 PF03167 Uracil DNA glycosylase superfamily LI62_RS16835 PF00588 SpoU rRNA Methylase family LI62_RS16835 PF08032 RNA 2'-O ribose methyltransferase substrate binding LI62_RS16840 PF00085 Thioredoxin LI62_RS16845 PF03942 LI62_RS16845 LI62_RS16850 PF00583 Acetyltransferase (GNAT) family LI62_RS16850 PF13380 CoA binding domain LI62_RS16850 PF13549 ATP-grasp domain LI62_RS16850 PF13607 Succinyl-CoA ligase like flavodoxin domain LI62_RS16855 PF13091 PLD-like domain LI62_RS16860 PF10043 LI62_RS16860 LI62_RS16865 PF00083 Sugar (and other) transporter LI62_RS16865 PF07690 Major Facilitator Superfamily LI62_RS16870 PF14328 LI62_RS16870 LI62_RS16895 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS16895 PF02861 Clp amino terminal domain LI62_RS16895 PF07724 AAA domain (Cdc48 subfamily) LI62_RS16895 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS16900 PF02578 Multi-copper polyphenol oxidoreductase laccase LI62_RS16905 PF00849 RNA pseudouridylate synthase LI62_RS16905 PF01479 S4 domain LI62_RS16910 PF13525 Outer membrane lipoprotein LI62_RS16915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LI62_RS16920 PF00800 Prephenate dehydratase LI62_RS16920 PF01817 Chorismate mutase type II LI62_RS16925 PF08450 SMP-30/Gluconolaconase/LRE-like region LI62_RS16930 PF01817 Chorismate mutase type II LI62_RS16930 PF02153 Prephenate dehydrogenase LI62_RS16935 PF00793 DAHP synthetase I family LI62_RS16940 PF10973 LI62_RS16940 LI62_RS16945 PF13689 LI62_RS16945 LI62_RS16950 PF00990 GGDEF domain LI62_RS16950 PF17152 LI62_RS16950 LI62_RS16955 PF00691 OmpA family LI62_RS16960 PF03929 LI62_RS16960 LI62_RS16965 PF11162 LI62_RS16965 LI62_RS16970 PF01245 Ribosomal protein L19 LI62_RS16975 PF01746 tRNA (Guanine-1)-methyltransferase LI62_RS16980 PF01782 RimM N-terminal domain LI62_RS16980 PF05239 PRC-barrel domain LI62_RS16985 PF00886 Ribosomal protein S16 LI62_RS16990 PF00448 SRP54-type protein, GTPase domain LI62_RS16990 PF02881 SRP54-type protein, helical bundle domain LI62_RS16990 PF02978 Signal peptide binding domain LI62_RS16995 PF01578 LI62_RS16995 LI62_RS17000 PF00571 CBS domain LI62_RS17000 PF01595 LI62_RS17000 LI62_RS17000 PF03471 Transporter associated domain LI62_RS17005 PF01025 GrpE LI62_RS17015 PF01513 ATP-NAD kinase LI62_RS17020 PF13476 AAA domain LI62_RS17025 PF04355 SmpA / OmlA family LI62_RS17030 PF03658 RnfH family Ubiquitin LI62_RS17035 PF03364 Polyketide cyclase / dehydrase and lipid transport LI62_RS17040 PF01668 SmpB protein LI62_RS17045 PF00294 pfkB family carbohydrate kinase LI62_RS17045 PF08220 DeoR-like helix-turn-helix domain LI62_RS17050 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS17055 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS17060 PF13416 Bacterial extracellular solute-binding protein LI62_RS17065 PF03747 ADP-ribosylglycohydrolase LI62_RS17070 PF00005 ABC transporter LI62_RS17070 PF08402 TOBE domain LI62_RS17075 PF01584 CheW-like domain LI62_RS17080 PF01584 CheW-like domain LI62_RS17080 PF01627 Hpt domain LI62_RS17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS17080 PF02895 Signal transducing histidine kinase, homodimeric domain LI62_RS17080 PF09078 CheY binding LI62_RS17085 PF00691 OmpA family LI62_RS17085 PF13677 LI62_RS17085 LI62_RS17090 PF01618 LI62_RS17090 LI62_RS17095 PF05280 Flagellar transcriptional activator (FlhC) LI62_RS17100 PF05247 Flagellar transcriptional activator (FlhD) LI62_RS17105 PF04539 Sigma-70 region 3 LI62_RS17105 PF04542 Sigma-70 region 2 LI62_RS17105 PF04545 Sigma-70, region 4 LI62_RS17110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS17110 PF00672 HAMP domain LI62_RS17110 PF02203 Tar ligand binding domain homologue LI62_RS17115 PF00669 Bacterial flagellin N-terminal helical region LI62_RS17120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS17125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LI62_RS17125 PF10135 LI62_RS17125 LI62_RS17130 PF02119 LI62_RS17130 LI62_RS17135 PF02107 LI62_RS17135 LI62_RS17140 PF00460 Flagella basal body rod protein LI62_RS17140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS17145 PF00460 Flagella basal body rod protein LI62_RS17145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS17150 PF00460 Flagella basal body rod protein LI62_RS17150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS17150 PF07559 Flagellar basal body protein FlaE LI62_RS17155 PF03963 LI62_RS17155 LI62_RS17155 PF13861 FlgD Tudor-like domain LI62_RS17160 PF00460 Flagella basal body rod protein LI62_RS17160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LI62_RS17165 PF00460 Flagella basal body rod protein LI62_RS17170 PF13144 SAF-like LI62_RS17175 PF04316 Anti-sigma-28 factor, FlgM LI62_RS17180 PF05130 FlgN protein LI62_RS17185 PF05400 Flagellar protein FliT LI62_RS17190 PF02561 Flagellar protein FliS LI62_RS17195 PF02465 LI62_RS17195 LI62_RS17195 PF07195 LI62_RS17195 LI62_RS17195 PF07196 Flagellin hook IN motif LI62_RS17200 PF00669 Bacterial flagellin N-terminal helical region LI62_RS17200 PF00700 Bacterial flagellin C-terminal helical region LI62_RS17215 PF01311 LI62_RS17215 LI62_RS17220 PF01313 LI62_RS17220 LI62_RS17225 PF00813 LI62_RS17225 LI62_RS17230 PF04347 LI62_RS17230 LI62_RS17235 PF01052 Surface presentation of antigens (SPOA) LI62_RS17235 PF16973 LI62_RS17235 LI62_RS17240 PF01052 Surface presentation of antigens (SPOA) LI62_RS17240 PF02154 Flagellar motor switch protein FliM LI62_RS17245 PF03748 LI62_RS17245 LI62_RS17250 PF02120 Flagellar hook-length control protein FliK LI62_RS17255 PF02050 Flagellar FliJ protein LI62_RS17260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI62_RS17265 PF02108 LI62_RS17265 LI62_RS17270 PF01706 FliG C-terminal domain LI62_RS17270 PF14841 FliG middle domain LI62_RS17270 PF14842 FliG N-terminal domain LI62_RS17275 PF01514 Secretory protein of YscJ/FliF family LI62_RS17275 PF08345 LI62_RS17275 LI62_RS17280 PF02049 LI62_RS17280 LI62_RS17285 PF01739 CheR methyltransferase, SAM binding domain LI62_RS17285 PF03705 CheR methyltransferase, all-alpha domain LI62_RS17290 PF00072 Response regulator receiver domain LI62_RS17290 PF01339 CheB methylesterase LI62_RS17295 PF00072 Response regulator receiver domain LI62_RS17300 PF04344 Chemotaxis phosphatase, CheZ LI62_RS17305 PF01312 FlhB HrpN YscU SpaS Family LI62_RS17310 PF00771 FHIPEP family LI62_RS17315 PF06366 LI62_RS17315 LI62_RS17320 PF01425 Amidase LI62_RS17325 PF00815 Histidinol dehydrogenase LI62_RS17330 PF07366 SnoaL-like polyketide cyclase LI62_RS17335 PF07366 SnoaL-like polyketide cyclase LI62_RS17335 PF12680 SnoaL-like domain LI62_RS17340 PF00356 Bacterial regulatory proteins, lacI family LI62_RS17340 PF13377 Periplasmic binding protein-like domain LI62_RS17345 PF07690 Major Facilitator Superfamily LI62_RS17350 PF00815 Histidinol dehydrogenase LI62_RS17355 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS17360 PF12697 Alpha/beta hydrolase family LI62_RS17365 PF03328 HpcH/HpaI aldolase/citrate lyase family LI62_RS17375 PF12245 Bacterial Ig-like domain (group 3) LI62_RS17380 PF02321 Outer membrane efflux protein LI62_RS17385 PF00005 ABC transporter LI62_RS17385 PF00664 ABC transporter transmembrane region LI62_RS17390 PF13437 HlyD family secretion protein LI62_RS17390 PF13533 Biotin-lipoyl like LI62_RS17395 PF05015 Plasmid maintenance system killer protein LI62_RS17400 PF01381 Helix-turn-helix LI62_RS17405 PF00155 Aminotransferase class I and II LI62_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS17410 PF03466 LysR substrate binding domain LI62_RS17415 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS17420 PF07969 Amidohydrolase family LI62_RS17425 PF00696 Amino acid kinase family LI62_RS17435 PF06545 Protein of unknown function (DUF1116) LI62_RS17440 PF00549 CoA-ligase LI62_RS17440 PF02629 CoA binding domain LI62_RS17445 PF12796 Ankyrin repeats (3 copies) LI62_RS17445 PF13637 Ankyrin repeats (many copies) LI62_RS17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS17450 PF03466 LysR substrate binding domain LI62_RS17455 PF01679 LI62_RS17455 LI62_RS17465 PF00816 H-NS histone family LI62_RS17470 PF06610 LI62_RS17470 LI62_RS17475 PF09400 Protein of unknown function (DUF2002) LI62_RS17480 PF05957 LI62_RS17480 LI62_RS17485 PF00462 Glutaredoxin LI62_RS17490 PF07972 NrdI Flavodoxin like LI62_RS17495 PF00317 Ribonucleotide reductase, all-alpha domain LI62_RS17495 PF02867 Ribonucleotide reductase, barrel domain LI62_RS17495 PF08343 Ribonucleotide reductase N-terminal LI62_RS17500 PF00268 Ribonucleotide reductase, small chain LI62_RS17505 PF00005 ABC transporter LI62_RS17505 PF00571 CBS domain LI62_RS17510 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS17515 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LI62_RS17520 PF07690 Major Facilitator Superfamily LI62_RS17525 PF01047 MarR family LI62_RS17530 PF00529 HlyD family secretion protein LI62_RS17530 PF16576 LI62_RS17530 LI62_RS17535 PF07690 Major Facilitator Superfamily LI62_RS17540 PF00682 HMGL-like LI62_RS17540 PF08502 LeuA allosteric (dimerisation) domain LI62_RS17545 PF07883 Cupin domain LI62_RS17545 PF12833 Helix-turn-helix domain LI62_RS17550 PF02664 S-Ribosylhomocysteinase (LuxS) LI62_RS17555 PF04262 Glutamate-cysteine ligase LI62_RS17560 PF09335 LI62_RS17560 LI62_RS17565 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS17595 PF02599 Global regulator protein family LI62_RS17600 PF01411 tRNA synthetases class II (A) LI62_RS17600 PF02272 DHHA1 domain LI62_RS17600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LI62_RS17605 PF02631 RecX family LI62_RS17610 PF00154 recA bacterial DNA recombination protein LI62_RS17615 PF02464 Competence-damaged protein LI62_RS17620 PF01297 Periplasmic solute binding protein family LI62_RS17625 PF00950 LI62_RS17625 LI62_RS17630 PF00005 ABC transporter LI62_RS17635 PF13406 Transglycosylase SLT domain LI62_RS17640 PF03608 LI62_RS17640 LI62_RS17645 PF03612 LI62_RS17645 LI62_RS17645 PF07663 LI62_RS17645 LI62_RS17650 PF03829 PTS system glucitol/sorbitol-specific IIA component LI62_RS17655 PF00106 short chain dehydrogenase LI62_RS17660 PF06923 LI62_RS17660 LI62_RS17665 PF00455 LI62_RS17665 LI62_RS17665 PF08220 DeoR-like helix-turn-helix domain LI62_RS17670 PF00571 CBS domain LI62_RS17670 PF01380 SIS domain LI62_RS17675 PF00158 Sigma-54 interaction domain LI62_RS17675 PF01590 GAF domain LI62_RS17680 PF00258 Flavodoxin LI62_RS17680 PF00301 Rubredoxin LI62_RS17680 PF00753 Metallo-beta-lactamase superfamily LI62_RS17685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS17690 PF03824 LI62_RS17690 LI62_RS17695 PF00708 Acylphosphatase LI62_RS17695 PF01300 Telomere recombination LI62_RS17695 PF07503 HypF finger LI62_RS17700 PF00037 4Fe-4S binding domain LI62_RS17700 PF12798 4Fe-4S binding domain LI62_RS17705 PF00356 Bacterial regulatory proteins, lacI family LI62_RS17705 PF13377 Periplasmic binding protein-like domain LI62_RS17710 PF00367 phosphotransferase system, EIIB LI62_RS17710 PF02378 Phosphotransferase system, EIIC LI62_RS17715 PF00232 Glycosyl hydrolase family 1 LI62_RS17720 PF01750 Hydrogenase maturation protease LI62_RS17725 PF07450 LI62_RS17725 LI62_RS17730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LI62_RS17735 PF12838 4Fe-4S dicluster domain LI62_RS17740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LI62_RS17740 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LI62_RS17740 PF00374 Nickel-dependent hydrogenase LI62_RS17745 PF00146 NADH dehydrogenase LI62_RS17750 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains LI62_RS17755 PF13247 4Fe-4S dicluster domain LI62_RS17760 PF11046 LI62_RS17760 LI62_RS17765 PF01155 Hydrogenase expression/synthesis hypA family LI62_RS17770 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI62_RS17775 PF01455 HupF/HypC family LI62_RS17780 PF01924 Hydrogenase formation hypA family LI62_RS17785 PF00586 AIR synthase related protein, N-terminal domain LI62_RS17785 PF02769 AIR synthase related protein, C-terminal domain LI62_RS17790 PF00158 Sigma-54 interaction domain LI62_RS17790 PF01590 GAF domain LI62_RS17790 PF02954 Bacterial regulatory protein, Fis family LI62_RS17795 PF11756 LI62_RS17795 LI62_RS17800 PF08845 LI62_RS17800 LI62_RS17805 PF00488 MutS domain V LI62_RS17805 PF01624 MutS domain I LI62_RS17805 PF05188 MutS domain II LI62_RS17805 PF05190 MutS family domain IV LI62_RS17805 PF05192 MutS domain III LI62_RS17815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LI62_RS17820 PF02441 Flavoprotein LI62_RS17825 PF01047 MarR family LI62_RS17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS17830 PF03466 LysR substrate binding domain LI62_RS17835 PF07690 Major Facilitator Superfamily LI62_RS17840 PF14534 Domain of unknown function (DUF4440) LI62_RS17845 PF00140 Sigma-70 factor, region 1 LI62_RS17845 PF04539 Sigma-70 region 3 LI62_RS17845 PF04542 Sigma-70 region 2 LI62_RS17845 PF04545 Sigma-70, region 4 LI62_RS17850 PF01476 LysM domain LI62_RS17850 PF01551 Peptidase family M23 LI62_RS17855 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) LI62_RS17860 PF01975 Survival protein SurE LI62_RS17865 PF01142 tRNA pseudouridine synthase D (TruD) LI62_RS17870 PF02542 YgbB family LI62_RS17875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LI62_RS17880 PF04977 Septum formation initiator LI62_RS17885 PF12084 LI62_RS17885 LI62_RS17890 PF01583 Adenylylsulphate kinase LI62_RS17895 PF00009 Elongation factor Tu GTP binding domain LI62_RS17900 PF01507 Phosphoadenosine phosphosulfate reductase family LI62_RS17905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI62_RS17905 PF10414 Sirohaem synthase dimerisation region LI62_RS17905 PF13241 Putative NAD(P)-binding LI62_RS17905 PF14824 Sirohaem biosynthesis protein central LI62_RS17910 PF04389 Peptidase family M28 LI62_RS17915 PF01507 Phosphoadenosine phosphosulfate reductase family LI62_RS17920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI62_RS17920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI62_RS17925 PF00175 Oxidoreductase NAD-binding domain LI62_RS17925 PF00258 Flavodoxin LI62_RS17925 PF00667 FAD binding domain LI62_RS17930 PF01242 6-pyruvoyl tetrahydropterin synthase LI62_RS17935 PF12833 Helix-turn-helix domain LI62_RS17940 PF01546 Peptidase family M20/M25/M40 LI62_RS17940 PF07687 Peptidase dimerisation domain LI62_RS17945 PF07690 Major Facilitator Superfamily LI62_RS17950 PF04055 Radical SAM superfamily LI62_RS17950 PF13394 4Fe-4S single cluster domain LI62_RS17955 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LI62_RS17960 PF00367 phosphotransferase system, EIIB LI62_RS17960 PF02378 Phosphotransferase system, EIIC LI62_RS17965 PF01380 SIS domain LI62_RS17965 PF01418 Helix-turn-helix domain, rpiR family LI62_RS17970 PF00113 Enolase, C-terminal TIM barrel domain LI62_RS17970 PF03952 Enolase, N-terminal domain LI62_RS17975 PF00117 Glutamine amidotransferase class-I LI62_RS17975 PF06418 CTP synthase N-terminus LI62_RS17980 PF03819 MazG nucleotide pyrophosphohydrolase domain LI62_RS17985 PF02824 TGS domain LI62_RS17985 PF04607 Region found in RelA / SpoT proteins LI62_RS17985 PF13291 ACT domain LI62_RS17985 PF13328 HD domain LI62_RS17990 PF01938 TRAM domain LI62_RS17990 PF05958 tRNA (Uracil-5-)-methyltransferase LI62_RS17995 PF00072 Response regulator receiver domain LI62_RS17995 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS17995 PF00672 HAMP domain LI62_RS17995 PF01627 Hpt domain LI62_RS17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS17995 PF09984 LI62_RS17995 LI62_RS18000 PF02595 Glycerate kinase family LI62_RS18005 PF13378 Enolase C-terminal domain-like LI62_RS18010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LI62_RS18010 PF13378 Enolase C-terminal domain-like LI62_RS18015 PF07690 Major Facilitator Superfamily LI62_RS18020 PF00258 Flavodoxin LI62_RS18025 PF00849 RNA pseudouridylate synthase LI62_RS18030 PF04287 tRNA pseudouridine synthase C LI62_RS18040 PF07348 Syd protein (SUKH-2) LI62_RS18045 PF14489 QueF-like protein LI62_RS18045 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LI62_RS18050 PF03641 Possible lysine decarboxylase LI62_RS18050 PF11892 Domain of unknown function (DUF3412) LI62_RS18050 PF14793 Domain of unknown function (DUF4478) LI62_RS18060 PF03313 LI62_RS18060 LI62_RS18060 PF03315 Serine dehydratase beta chain LI62_RS18065 PF01367 5'-3' exonuclease, C-terminal SAM fold LI62_RS18065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI62_RS18070 PF01728 FtsJ-like methyltransferase LI62_RS18075 PF04241 LI62_RS18075 LI62_RS18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS18080 PF03466 LysR substrate binding domain LI62_RS18085 PF06004 Bacterial protein of unknown function (DUF903) LI62_RS18090 PF00266 Aminotransferase class-V LI62_RS18095 PF02657 Fe-S metabolism associated domain LI62_RS18100 PF00899 ThiF family LI62_RS18105 PF03562 MltA specific insert domain LI62_RS18105 PF06725 3D domain LI62_RS18125 PF01520 N-acetylmuramoyl-L-alanine amidase LI62_RS18125 PF11741 AMIN domain LI62_RS18130 PF00583 Acetyltransferase (GNAT) family LI62_RS18130 PF00696 Amino acid kinase family LI62_RS18135 PF13538 UvrD-like helicase C-terminal domain LI62_RS18135 PF13604 AAA domain LI62_RS18140 PF00580 UvrD/REP helicase N-terminal domain LI62_RS18140 PF12705 PD-(D/E)XK nuclease superfamily LI62_RS18140 PF13361 UvrD-like helicase C-terminal domain LI62_RS18145 PF00675 Insulinase (Peptidase family M16) LI62_RS18145 PF05193 Peptidase M16 inactive domain LI62_RS18145 PF16187 LI62_RS18145 LI62_RS18150 PF04257 Exodeoxyribonuclease V, gamma subunit LI62_RS18155 PF12528 LI62_RS18155 LI62_RS18160 PF10713 LI62_RS18160 LI62_RS18165 PF13544 LI62_RS18165 LI62_RS18170 PF13544 LI62_RS18170 LI62_RS18175 PF00303 Thymidylate synthase LI62_RS18180 PF01790 LI62_RS18180 LI62_RS18185 PF00391 PEP-utilising enzyme, mobile domain LI62_RS18185 PF01590 GAF domain LI62_RS18185 PF02896 PEP-utilising enzyme, TIM barrel domain LI62_RS18185 PF05524 PEP-utilising enzyme, N-terminal LI62_RS18190 PF00293 NUDIX domain LI62_RS18195 PF02976 DNA mismatch repair enzyme MutH LI62_RS18200 PF06004 Bacterial protein of unknown function (DUF903) LI62_RS18205 PF00248 Aldo/keto reductase family LI62_RS18210 PF07690 Major Facilitator Superfamily LI62_RS18215 PF00501 AMP-binding enzyme LI62_RS18215 PF01553 Acyltransferase LI62_RS18220 PF00356 Bacterial regulatory proteins, lacI family LI62_RS18220 PF13377 Periplasmic binding protein-like domain LI62_RS18225 PF13673 Acetyltransferase (GNAT) domain LI62_RS18230 PF00392 Bacterial regulatory proteins, gntR family LI62_RS18230 PF07729 FCD domain LI62_RS18235 PF00232 Glycosyl hydrolase family 1 LI62_RS18240 PF02378 Phosphotransferase system, EIIC LI62_RS18245 PF00356 Bacterial regulatory proteins, lacI family LI62_RS18245 PF13377 Periplasmic binding protein-like domain LI62_RS18250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LI62_RS18250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI62_RS18255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS18255 PF03466 LysR substrate binding domain LI62_RS18260 PF01177 Asp/Glu/Hydantoin racemase LI62_RS18265 PF07883 Cupin domain LI62_RS18270 PF02706 Chain length determinant protein LI62_RS18275 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS18280 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS18285 PF00005 ABC transporter LI62_RS18285 PF08402 TOBE domain LI62_RS18290 PF01547 Bacterial extracellular solute-binding protein LI62_RS18295 PF00083 Sugar (and other) transporter LI62_RS18300 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS18305 PF04962 KduI/IolB family LI62_RS18310 PF14583 Oligogalacturonate lyase LI62_RS18315 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI62_RS18320 PF00108 Thiolase, N-terminal domain LI62_RS18320 PF02803 Thiolase, C-terminal domain LI62_RS18325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS18325 PF03466 LysR substrate binding domain LI62_RS18330 PF05232 LI62_RS18330 LI62_RS18340 PF14542 GCN5-related N-acetyl-transferase LI62_RS18345 PF06902 Divergent 4Fe-4S mono-cluster LI62_RS18350 PF10685 LI62_RS18350 LI62_RS18355 PF05974 Domain of unknown function (DUF892) LI62_RS18360 PF05974 Domain of unknown function (DUF892) LI62_RS18365 PF05067 Manganese containing catalase LI62_RS18370 PF01654 LI62_RS18370 LI62_RS18375 PF02322 LI62_RS18375 LI62_RS18380 PF00128 Alpha amylase, catalytic domain LI62_RS18385 PF00106 short chain dehydrogenase LI62_RS18390 PF02464 Competence-damaged protein LI62_RS18395 PF04239 Protein of unknown function (DUF421) LI62_RS18405 PF04076 Bacterial OB fold (BOF) protein LI62_RS18410 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS18415 PF00753 Metallo-beta-lactamase superfamily LI62_RS18415 PF14863 Alkyl sulfatase dimerisation LI62_RS18415 PF14864 Alkyl sulfatase C-terminal LI62_RS18425 PF01389 OmpA-like transmembrane domain LI62_RS18430 PF15977 LI62_RS18430 LI62_RS18435 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LI62_RS18440 PF00857 Isochorismatase family LI62_RS18460 PF01476 LysM domain LI62_RS18460 PF01551 Peptidase family M23 LI62_RS18465 PF00293 NUDIX domain LI62_RS18470 PF00152 tRNA synthetases class II (D, K and N) LI62_RS18470 PF01336 OB-fold nucleic acid binding domain LI62_RS18475 PF00472 RF-1 domain LI62_RS18475 PF03462 PCRF domain LI62_RS18485 PF01368 DHH family LI62_RS18485 PF02272 DHHA1 domain LI62_RS18490 PF10411 Disulfide bond isomerase protein N-terminus LI62_RS18490 PF13098 Thioredoxin-like domain LI62_RS18495 PF00589 Phage integrase family LI62_RS18495 PF02899 Phage integrase, N-terminal SAM-like domain LI62_RS18500 PF00258 Flavodoxin LI62_RS18505 PF07254 LI62_RS18505 LI62_RS18510 PF03937 Flavinator of succinate dehydrogenase LI62_RS18515 PF01571 Aminomethyltransferase folate-binding domain LI62_RS18520 PF03006 LI62_RS18520 LI62_RS18525 PF01380 SIS domain LI62_RS18525 PF01418 Helix-turn-helix domain, rpiR family LI62_RS18530 PF00232 Glycosyl hydrolase family 1 LI62_RS18540 PF11412 Disulphide bond corrector protein DsbC LI62_RS18540 PF13899 Thioredoxin-like LI62_RS18545 PF13462 Thioredoxin LI62_RS18550 PF00578 AhpC/TSA family LI62_RS18555 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS18560 PF02347 Glycine cleavage system P-protein LI62_RS18565 PF01597 Glycine cleavage H-protein LI62_RS18570 PF01571 Aminomethyltransferase folate-binding domain LI62_RS18570 PF08669 Glycine cleavage T-protein C-terminal barrel domain LI62_RS18575 PF01494 FAD binding domain LI62_RS18580 PF01494 FAD binding domain LI62_RS18585 PF00557 Metallopeptidase family M24 LI62_RS18585 PF05195 Aminopeptidase P, N-terminal domain LI62_RS18590 PF03695 Uncharacterised protein family (UPF0149) LI62_RS18595 PF05164 Cell division protein ZapA LI62_RS18600 PF01812 5-formyltetrahydrofolate cyclo-ligase family LI62_RS18605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LI62_RS18605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LI62_RS18610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LI62_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS18615 PF03466 LysR substrate binding domain LI62_RS18620 PF04402 Protein of unknown function (DUF541) LI62_RS18625 PF01810 LI62_RS18625 LI62_RS18630 PF03480 Bacterial extracellular solute-binding protein, family 7 LI62_RS18635 PF00924 Mechanosensitive ion channel LI62_RS18635 PF05552 Conserved TM helix LI62_RS18640 PF01116 Fructose-bisphosphate aldolase class-II LI62_RS18645 PF00162 Phosphoglycerate kinase LI62_RS18650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS18650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LI62_RS18655 PF00456 Transketolase, thiamine diphosphate binding domain LI62_RS18655 PF02779 Transketolase, pyrimidine binding domain LI62_RS18655 PF02780 Transketolase, C-terminal domain LI62_RS18660 PF01435 Peptidase family M48 LI62_RS18665 PF03573 outer membrane porin, OprD family LI62_RS18670 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS18670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS18670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS18675 PF00171 Aldehyde dehydrogenase family LI62_RS18680 PF01958 Domain of unknown function DUF108 LI62_RS18680 PF03447 Homoserine dehydrogenase, NAD binding domain LI62_RS18685 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS18690 PF00561 alpha/beta hydrolase fold LI62_RS18695 PF07883 Cupin domain LI62_RS18700 PF07690 Major Facilitator Superfamily LI62_RS18705 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS18705 PF14759 Reductase C-terminal LI62_RS18710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS18715 PF01614 Bacterial transcriptional regulator LI62_RS18715 PF09339 IclR helix-turn-helix domain LI62_RS18720 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS18725 PF00355 Rieske [2Fe-2S] domain LI62_RS18735 PF00355 Rieske [2Fe-2S] domain LI62_RS18740 PF07690 Major Facilitator Superfamily LI62_RS18745 PF00491 Arginase family LI62_RS18750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LI62_RS18750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LI62_RS18755 PF10885 LI62_RS18755 LI62_RS18760 PF00438 S-adenosylmethionine synthetase, N-terminal domain LI62_RS18760 PF02772 S-adenosylmethionine synthetase, central domain LI62_RS18760 PF02773 S-adenosylmethionine synthetase, C-terminal domain LI62_RS18765 PF00083 Sugar (and other) transporter LI62_RS18770 PF10263 LI62_RS18770 LI62_RS18775 PF04231 Endonuclease I LI62_RS18780 PF04452 RNA methyltransferase LI62_RS18785 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LI62_RS18785 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LI62_RS18790 PF02622 Uncharacterized ACR, COG1678 LI62_RS18795 PF03652 Uncharacterised protein family (UPF0081) LI62_RS18800 PF00437 Type II/IV secretion system protein LI62_RS18805 PF01168 Alanine racemase, N-terminal domain LI62_RS18810 PF02325 LI62_RS18810 LI62_RS18815 PF02594 Uncharacterised ACR, YggU family COG1872 LI62_RS18820 PF01725 Ham1 family LI62_RS18825 PF04055 Radical SAM superfamily LI62_RS18825 PF06969 HemN C-terminal domain LI62_RS18830 PF04480 Protein of unknown function (DUF559) LI62_RS18835 PF11101 LI62_RS18835 LI62_RS18840 PF04320 LI62_RS18840 LI62_RS18845 PF02390 Putative methyltransferase LI62_RS18850 PF00633 Helix-hairpin-helix motif LI62_RS18850 PF00730 HhH-GPD superfamily base excision DNA repair protein LI62_RS18850 PF10576 Iron-sulfur binding domain of endonuclease III LI62_RS18850 PF14815 NUDIX domain LI62_RS18855 PF04362 Bacterial Fe(2+) trafficking LI62_RS18860 PF01464 Transglycosylase SLT domain LI62_RS18860 PF11873 Domain of unknown function (DUF3393) LI62_RS18865 PF03825 LI62_RS18865 LI62_RS18870 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LI62_RS18875 PF03802 LI62_RS18875 LI62_RS18880 PF04223 Citrate lyase, alpha subunit (CitF) LI62_RS18885 PF03328 HpcH/HpaI aldolase/citrate lyase family LI62_RS18890 PF06857 LI62_RS18890 LI62_RS18895 PF08218 Citrate lyase ligase C-terminal domain LI62_RS18900 PF01557 Fumarylacetoacetate (FAA) hydrolase family LI62_RS18905 PF03390 LI62_RS18905 LI62_RS18910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS18910 PF13188 PAS domain LI62_RS18910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LI62_RS18910 PF17203 LI62_RS18910 LI62_RS18915 PF00072 Response regulator receiver domain LI62_RS18915 PF12431 LI62_RS18915 LI62_RS18920 PF01276 Orn/Lys/Arg decarboxylase, major domain LI62_RS18920 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LI62_RS18920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LI62_RS18925 PF04474 LI62_RS18925 LI62_RS18935 PF00589 Phage integrase family LI62_RS18935 PF02899 Phage integrase, N-terminal SAM-like domain LI62_RS18940 PF07514 Putative helicase LI62_RS18940 PF07515 Protein of unknown function (DUF1528) LI62_RS18945 PF00580 UvrD/REP helicase N-terminal domain LI62_RS18945 PF13361 UvrD-like helicase C-terminal domain LI62_RS18950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LI62_RS18950 PF08388 LI62_RS18950 LI62_RS18960 PF00145 C-5 cytosine-specific DNA methylase LI62_RS18965 PF09019 EcoRII C terminal LI62_RS18965 PF09217 Restriction endonuclease EcoRII, N-terminal LI62_RS18970 PF13676 TIR domain LI62_RS18980 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS18995 PF13560 Helix-turn-helix domain LI62_RS19000 PF06114 Domain of unknown function (DUF955) LI62_RS19010 PF01548 LI62_RS19010 LI62_RS19010 PF02371 LI62_RS19010 LI62_RS19015 PF00239 Resolvase, N terminal domain LI62_RS19015 PF02796 Helix-turn-helix domain of resolvase LI62_RS19035 PF07883 Cupin domain LI62_RS19040 PF01934 Protein of unknown function DUF86 LI62_RS19045 PF01909 Nucleotidyltransferase domain LI62_RS19050 PF01609 Transposase DDE domain LI62_RS19050 PF05598 LI62_RS19050 LI62_RS19065 PF12834 LI62_RS19065 LI62_RS19065 PF12835 Integrase LI62_RS19070 PF01609 Transposase DDE domain LI62_RS19070 PF05598 LI62_RS19070 LI62_RS19075 PF03824 LI62_RS19075 LI62_RS19080 PF12833 Helix-turn-helix domain LI62_RS19085 PF04632 LI62_RS19085 LI62_RS19090 PF16576 LI62_RS19090 LI62_RS19095 PF07338 Protein of unknown function (DUF1471) LI62_RS19100 PF00440 Bacterial regulatory proteins, tetR family LI62_RS19105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI62_RS19105 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS19110 PF01609 Transposase DDE domain LI62_RS19110 PF05598 LI62_RS19110 LI62_RS19115 PF01022 Bacterial regulatory protein, arsR family LI62_RS19120 PF01545 Cation efflux family LI62_RS19125 PF00122 E1-E2 ATPase LI62_RS19125 PF00403 Heavy-metal-associated domain LI62_RS19125 PF00702 haloacid dehalogenase-like hydrolase LI62_RS19130 PF00376 MerR family regulatory protein LI62_RS19130 PF09278 MerR, DNA binding LI62_RS19135 PF13411 MerR HTH family regulatory protein LI62_RS19140 PF00122 E1-E2 ATPase LI62_RS19140 PF00403 Heavy-metal-associated domain LI62_RS19140 PF00702 haloacid dehalogenase-like hydrolase LI62_RS19150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LI62_RS19155 PF00111 2Fe-2S iron-sulfur cluster binding domain LI62_RS19155 PF00175 Oxidoreductase NAD-binding domain LI62_RS19155 PF00384 Molybdopterin oxidoreductase LI62_RS19155 PF00970 Oxidoreductase FAD-binding domain LI62_RS19155 PF01568 Molydopterin dinucleotide binding domain LI62_RS19155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS19160 PF16576 LI62_RS19160 LI62_RS19165 PF00873 AcrB/AcrD/AcrF family LI62_RS19170 PF13476 AAA domain LI62_RS19175 PF00717 Peptidase S24-like LI62_RS19180 PF08020 Protein of unknown function (DUF1706) LI62_RS19190 PF00665 Integrase core domain LI62_RS19195 PF01695 IstB-like ATP binding protein LI62_RS19200 PF01610 LI62_RS19200 LI62_RS19210 PF07916 LI62_RS19210 LI62_RS19225 PF06834 LI62_RS19225 LI62_RS19230 PF07511 LI62_RS19230 LI62_RS19245 PF11130 LI62_RS19245 LI62_RS19260 PF03743 Bacterial conjugation TrbI-like protein LI62_RS19265 PF11920 LI62_RS19265 LI62_RS19270 PF11444 LI62_RS19270 LI62_RS19275 PF11990 LI62_RS19275 LI62_RS19280 PF11190 LI62_RS19280 LI62_RS19285 PF11660 LI62_RS19285 LI62_RS19290 PF09686 LI62_RS19290 LI62_RS19300 PF14348 LI62_RS19300 LI62_RS19305 PF12696 TraM recognition site of TraD and TraG LI62_RS19315 PF04471 Restriction endonuclease LI62_RS19320 PF11072 LI62_RS19320 LI62_RS19325 PF01464 Transglycosylase SLT domain LI62_RS19345 PF10387 Protein of unknown function (DUF2442) LI62_RS19350 PF13711 LI62_RS19350 LI62_RS19355 PF00436 Single-strand binding protein family LI62_RS19360 PF12101 LI62_RS19360 LI62_RS19365 PF01131 DNA topoisomerase LI62_RS19365 PF01396 LI62_RS19365 LI62_RS19365 PF01751 Toprim domain LI62_RS19375 PF08900 LI62_RS19375 LI62_RS19380 PF13730 LI62_RS19380 LI62_RS19390 PF11198 LI62_RS19390 LI62_RS19395 PF10979 LI62_RS19395 LI62_RS19405 PF00772 DnaB-like helicase N terminal domain LI62_RS19405 PF03796 DnaB-like helicase C terminal domain LI62_RS19410 PF13614 AAA domain LI62_RS19415 PF00072 Response regulator receiver domain LI62_RS19415 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS19420 PF00072 Response regulator receiver domain LI62_RS19420 PF00196 Bacterial regulatory proteins, luxR family LI62_RS19430 PF03797 Autotransporter beta-domain LI62_RS19435 PF00196 Bacterial regulatory proteins, luxR family LI62_RS19445 PF01522 Polysaccharide deacetylase LI62_RS19445 PF14883 Hypothetical glycosyl hydrolase family 13 LI62_RS19450 PF13641 Glycosyltransferase like family 2 LI62_RS19455 PF13994 LI62_RS19455 LI62_RS19460 PF03738 Glutathionylspermidine synthase preATP-grasp LI62_RS19460 PF05257 CHAP domain LI62_RS19465 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS19465 PF13410 Glutathione S-transferase, C-terminal domain LI62_RS19470 PF00455 LI62_RS19470 LI62_RS19470 PF08220 DeoR-like helix-turn-helix domain LI62_RS19475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS19475 PF00672 HAMP domain LI62_RS19475 PF02203 Tar ligand binding domain homologue LI62_RS19480 PF00248 Aldo/keto reductase family LI62_RS19485 PF03350 LI62_RS19485 LI62_RS19505 PF02472 Biopolymer transport protein ExbD/TolR LI62_RS19510 PF01618 LI62_RS19510 LI62_RS19515 PF01053 Cys/Met metabolism PLP-dependent enzyme LI62_RS19520 PF09335 LI62_RS19520 LI62_RS19525 PF06719 LI62_RS19525 LI62_RS19525 PF12833 Helix-turn-helix domain LI62_RS19530 PF00465 Iron-containing alcohol dehydrogenase LI62_RS19535 PF00248 Aldo/keto reductase family LI62_RS19540 PF04055 Radical SAM superfamily LI62_RS19540 PF11842 LI62_RS19540 LI62_RS19550 PF07693 LI62_RS19550 LI62_RS19555 PF01381 Helix-turn-helix LI62_RS19560 PF00440 Bacterial regulatory proteins, tetR family LI62_RS19560 PF16925 LI62_RS19560 LI62_RS19565 PF00107 Zinc-binding dehydrogenase LI62_RS19565 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS19570 PF03811 LI62_RS19570 LI62_RS19570 PF12759 LI62_RS19570 LI62_RS19575 PF03400 LI62_RS19575 LI62_RS19580 PF02583 Metal-sensitive transcriptional repressor LI62_RS19585 PF00107 Zinc-binding dehydrogenase LI62_RS19585 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS19590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LI62_RS19595 PF00756 Putative esterase LI62_RS19610 PF00005 ABC transporter LI62_RS19615 PF03050 LI62_RS19615 LI62_RS19620 PF00107 Zinc-binding dehydrogenase LI62_RS19620 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS19620 PF13823 Alcohol dehydrogenase GroES-associated LI62_RS19635 PF13460 NADH(P)-binding LI62_RS19640 PF12833 Helix-turn-helix domain LI62_RS19645 PF00892 EamA-like transporter family LI62_RS19650 PF00753 Metallo-beta-lactamase superfamily LI62_RS19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS19655 PF03466 LysR substrate binding domain LI62_RS19660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI62_RS19665 PF12840 Helix-turn-helix domain LI62_RS19670 PF13276 LI62_RS19670 LI62_RS19675 PF01527 Transposase LI62_RS19695 PF00589 Phage integrase family LI62_RS19705 PF08497 LI62_RS19705 LI62_RS19710 PF07731 Multicopper oxidase LI62_RS19710 PF07732 Multicopper oxidase LI62_RS19715 PF01553 Acyltransferase LI62_RS19720 PF00521 DNA gyrase/topoisomerase IV, subunit A LI62_RS19720 PF03989 DNA gyrase C-terminal domain, beta-propeller LI62_RS19725 PF04076 Bacterial OB fold (BOF) protein LI62_RS19730 PF00072 Response regulator receiver domain LI62_RS19730 PF00486 Transcriptional regulatory protein, C terminal LI62_RS19735 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS19735 PF08521 LI62_RS19735 LI62_RS19740 PF02525 Flavodoxin-like fold LI62_RS19745 PF03992 Antibiotic biosynthesis monooxygenase LI62_RS19750 PF01476 LysM domain LI62_RS19750 PF04972 BON domain LI62_RS19755 PF07470 Glycosyl Hydrolase Family 88 LI62_RS19760 PF01306 LacY proton/sugar symporter LI62_RS19765 PF10022 LI62_RS19765 LI62_RS19770 PF02311 AraC-like ligand binding domain LI62_RS19770 PF12833 Helix-turn-helix domain LI62_RS19775 PF01380 SIS domain LI62_RS19775 PF01418 Helix-turn-helix domain, rpiR family LI62_RS19780 PF01497 Periplasmic binding protein LI62_RS19785 PF01032 FecCD transport family LI62_RS19790 PF01032 FecCD transport family LI62_RS19795 PF00005 ABC transporter LI62_RS19800 PF00593 TonB dependent receptor LI62_RS19800 PF07715 TonB-dependent Receptor Plug Domain LI62_RS19805 PF00204 DNA gyrase B LI62_RS19805 PF00986 DNA gyrase B subunit, carboxyl terminus LI62_RS19805 PF01751 Toprim domain LI62_RS19805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS19810 PF05728 Uncharacterised protein family (UPF0227) LI62_RS19815 PF00149 Calcineurin-like phosphoesterase LI62_RS19820 PF06853 LI62_RS19820 LI62_RS19825 PF00293 NUDIX domain LI62_RS19830 PF02321 Outer membrane efflux protein LI62_RS19835 PF06693 LI62_RS19835 LI62_RS19840 PF03738 Glutathionylspermidine synthase preATP-grasp LI62_RS19845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LI62_RS19850 PF02535 LI62_RS19850 LI62_RS19855 PF00419 Fimbrial protein LI62_RS19860 PF00577 Outer membrane usher protein LI62_RS19860 PF13953 PapC C-terminal domain LI62_RS19860 PF13954 PapC N-terminal domain LI62_RS19865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS19865 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS19870 PF00419 Fimbrial protein LI62_RS19875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LI62_RS19880 PF04380 LI62_RS19880 LI62_RS19885 PF00294 pfkB family carbohydrate kinase LI62_RS19885 PF01467 Cytidylyltransferase LI62_RS19890 PF03710 Glutamate-ammonia ligase adenylyltransferase LI62_RS19890 PF08335 GlnD PII-uridylyltransferase LI62_RS19895 PF01928 CYTH domain LI62_RS19900 PF08239 Bacterial SH3 domain LI62_RS19905 PF01743 Poly A polymerase head domain LI62_RS19905 PF01966 HD domain LI62_RS19905 PF12627 Probable RNA and SrmB- binding site of polymerase A LI62_RS19910 PF02673 LI62_RS19910 LI62_RS19915 PF02152 Dihydroneopterin aldolase LI62_RS19920 PF02660 LI62_RS19920 LI62_RS19925 PF00083 Sugar (and other) transporter LI62_RS19930 PF01774 UreD urease accessory protein LI62_RS19935 PF00547 Urease, gamma subunit LI62_RS19940 PF00699 Urease beta subunit LI62_RS19945 PF00449 Urease alpha-subunit, N-terminal domain LI62_RS19945 PF01979 Amidohydrolase family LI62_RS19950 PF02814 UreE urease accessory protein, N-terminal domain LI62_RS19950 PF05194 UreE urease accessory protein, C-terminal domain LI62_RS19955 PF04955 LI62_RS19955 LI62_RS19960 PF01730 UreF LI62_RS19965 PF02492 CobW/HypB/UreG, nucleotide-binding domain LI62_RS19970 PF00814 Glycoprotease family LI62_RS19975 PF01165 Ribosomal protein S21 LI62_RS19980 PF01807 CHC2 zinc finger LI62_RS19980 PF08275 DNA primase catalytic core, N-terminal domain LI62_RS19980 PF08278 DNA primase DnaG DnaB-binding LI62_RS19980 PF10410 DnaB-helicase binding domain of primase LI62_RS19980 PF13155 Toprim-like LI62_RS19985 PF00140 Sigma-70 factor, region 1 LI62_RS19985 PF03979 Sigma-70 factor, region 1 LI62_RS19985 PF04539 Sigma-70 region 3 LI62_RS19985 PF04542 Sigma-70 region 2 LI62_RS19985 PF04545 Sigma-70, region 4 LI62_RS19985 PF04546 Sigma-70, non-essential region LI62_RS19990 PF03167 Uracil DNA glycosylase superfamily LI62_RS20005 PF04954 Siderophore-interacting protein LI62_RS20005 PF08021 Siderophore-interacting FAD-binding domain LI62_RS20010 PF03551 Transcriptional regulator PadR-like family LI62_RS20015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS20015 PF00672 HAMP domain LI62_RS20015 PF12729 LI62_RS20015 LI62_RS20020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LI62_RS20020 PF00672 HAMP domain LI62_RS20020 PF08447 PAS fold LI62_RS20025 PF00202 Aminotransferase class-III LI62_RS20030 PF00419 Fimbrial protein LI62_RS20035 PF00419 Fimbrial protein LI62_RS20040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS20040 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS20045 PF00577 Outer membrane usher protein LI62_RS20045 PF13953 PapC C-terminal domain LI62_RS20045 PF13954 PapC N-terminal domain LI62_RS20050 PF00419 Fimbrial protein LI62_RS20055 PF00419 Fimbrial protein LI62_RS20060 PF00419 Fimbrial protein LI62_RS20065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS20065 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS20070 PF01381 Helix-turn-helix LI62_RS20070 PF07883 Cupin domain LI62_RS20075 PF03483 B3/4 domain LI62_RS20080 PF03992 Antibiotic biosynthesis monooxygenase LI62_RS20085 PF01791 DeoC/LacD family aldolase LI62_RS20090 PF13407 Periplasmic binding protein domain LI62_RS20095 PF02653 LI62_RS20095 LI62_RS20100 PF02653 LI62_RS20100 LI62_RS20105 PF00005 ABC transporter LI62_RS20110 PF04198 Putative sugar-binding domain LI62_RS20115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS20115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS20120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LI62_RS20120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS20125 PF05175 Methyltransferase small domain LI62_RS20130 PF01863 Protein of unknown function DUF45 LI62_RS20135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS20140 PF03741 LI62_RS20140 LI62_RS20145 PF00375 Sodium:dicarboxylate symporter family LI62_RS20150 PF04295 LI62_RS20150 LI62_RS20150 PF08666 SAF domain LI62_RS20155 PF02614 Glucuronate isomerase LI62_RS20160 PF07690 Major Facilitator Superfamily LI62_RS20165 PF00392 Bacterial regulatory proteins, gntR family LI62_RS20165 PF07729 FCD domain LI62_RS20170 PF09335 LI62_RS20170 LI62_RS20175 PF13721 SecD export protein N-terminal TM region LI62_RS20180 PF06476 LI62_RS20180 LI62_RS20185 PF05957 LI62_RS20185 LI62_RS20190 PF07332 LI62_RS20190 LI62_RS20195 PF13997 LI62_RS20195 LI62_RS20200 PF07681 LI62_RS20200 LI62_RS20205 PF13409 Glutathione S-transferase, N-terminal domain LI62_RS20205 PF13410 Glutathione S-transferase, C-terminal domain LI62_RS20210 PF05656 LI62_RS20210 LI62_RS20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS20215 PF03466 LysR substrate binding domain LI62_RS20220 PF02678 Pirin LI62_RS20225 PF03313 LI62_RS20225 LI62_RS20235 PF01228 Glycine radical LI62_RS20235 PF02901 Pyruvate formate lyase LI62_RS20240 PF00871 Acetokinase family LI62_RS20245 PF03222 Tryptophan/tyrosine permease family LI62_RS20250 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS20255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS20255 PF03466 LysR substrate binding domain LI62_RS20260 PF02595 Glycerate kinase family LI62_RS20265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI62_RS20265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI62_RS20270 PF03328 HpcH/HpaI aldolase/citrate lyase family LI62_RS20275 PF04295 LI62_RS20275 LI62_RS20275 PF08666 SAF domain LI62_RS20280 PF00455 LI62_RS20280 LI62_RS20280 PF08220 DeoR-like helix-turn-helix domain LI62_RS20285 PF08013 Tagatose 6 phosphate kinase LI62_RS20290 PF03830 PTS system sorbose subfamily IIB component LI62_RS20295 PF03609 LI62_RS20295 LI62_RS20300 PF03613 LI62_RS20300 LI62_RS20305 PF03610 PTS system fructose IIA component LI62_RS20310 PF01979 Amidohydrolase family LI62_RS20315 PF01380 SIS domain LI62_RS20320 PF01116 Fructose-bisphosphate aldolase class-II LI62_RS20325 PF00367 phosphotransferase system, EIIB LI62_RS20325 PF02378 Phosphotransferase system, EIIC LI62_RS20330 PF00155 Aminotransferase class I and II LI62_RS20340 PF02661 Fic/DOC family LI62_RS20345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI62_RS20350 PF04348 LppC putative lipoprotein LI62_RS20355 PF02021 Uncharacterised protein family UPF0102 LI62_RS20360 PF13580 SIS domain LI62_RS20365 PF04972 BON domain LI62_RS20370 PF03773 LI62_RS20370 LI62_RS20375 PF13460 NADH(P)-binding LI62_RS20380 PF01965 DJ-1/PfpI family LI62_RS20390 PF01541 GIY-YIG catalytic domain LI62_RS20395 PF13508 Acetyltransferase (GNAT) domain LI62_RS20400 PF02036 SCP-2 sterol transfer family LI62_RS20405 PF01136 LI62_RS20405 LI62_RS20410 PF01136 LI62_RS20410 LI62_RS20415 PF00296 Luciferase-like monooxygenase LI62_RS20420 PF03222 Tryptophan/tyrosine permease family LI62_RS20425 PF00270 DEAD/DEAH box helicase LI62_RS20425 PF00271 Helicase conserved C-terminal domain LI62_RS20425 PF03880 DbpA RNA binding domain LI62_RS20430 PF07719 Tetratricopeptide repeat LI62_RS20430 PF13181 Tetratricopeptide repeat LI62_RS20435 PF00013 KH domain LI62_RS20435 PF00575 S1 RNA binding domain LI62_RS20435 PF01138 3' exoribonuclease family, domain 1 LI62_RS20435 PF03725 3' exoribonuclease family, domain 2 LI62_RS20435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LI62_RS20440 PF00312 Ribosomal protein S15 LI62_RS20445 PF01509 TruB family pseudouridylate synthase (N terminal domain) LI62_RS20445 PF09157 Pseudouridine synthase II TruB, C-terminal LI62_RS20445 PF16198 LI62_RS20445 LI62_RS20450 PF02033 Ribosome-binding factor A LI62_RS20455 PF00009 Elongation factor Tu GTP binding domain LI62_RS20455 PF04760 Translation initiation factor IF-2, N-terminal region LI62_RS20455 PF08364 LI62_RS20455 LI62_RS20455 PF11987 Translation-initiation factor 2 LI62_RS20460 PF08529 NusA N-terminal domain LI62_RS20460 PF13184 NusA-like KH domain LI62_RS20460 PF14520 Helix-hairpin-helix domain LI62_RS20465 PF02576 Uncharacterised BCR, YhbC family COG0779 LI62_RS20475 PF00764 Arginosuccinate synthase LI62_RS20485 PF03840 Preprotein translocase SecG subunit LI62_RS20490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LI62_RS20490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LI62_RS20490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LI62_RS20490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LI62_RS20495 PF00809 Pterin binding enzyme LI62_RS20500 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS20500 PF01434 Peptidase family M41 LI62_RS20500 PF06480 FtsH Extracellular LI62_RS20505 PF01728 FtsJ-like methyltransferase LI62_RS20510 PF01985 CRS1 / YhbY (CRM) domain LI62_RS20515 PF01272 Transcription elongation factor, GreA/GreB, C-term LI62_RS20515 PF03449 Transcription elongation factor, N-terminal LI62_RS20520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LI62_RS20525 PF00072 Response regulator receiver domain LI62_RS20525 PF00486 Transcriptional regulatory protein, C terminal LI62_RS20530 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS20530 PF00672 HAMP domain LI62_RS20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS20535 PF01018 GTP1/OBG LI62_RS20535 PF01926 50S ribosome-binding GTPase LI62_RS20540 PF00892 EamA-like transporter family LI62_RS20545 PF01016 Ribosomal L27 protein LI62_RS20550 PF00829 Ribosomal prokaryotic L21 protein LI62_RS20555 PF00348 Polyprenyl synthetase LI62_RS20560 PF13693 Winged helix-turn-helix DNA-binding LI62_RS20565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LI62_RS20570 PF01722 BolA-like protein LI62_RS20575 PF13466 STAS domain LI62_RS20580 PF05494 Toluene tolerance, Ttg2 LI62_RS20585 PF02470 LI62_RS20585 LI62_RS20590 PF02405 LI62_RS20590 LI62_RS20595 PF00005 ABC transporter LI62_RS20600 PF01699 Sodium/calcium exchanger protein LI62_RS20605 PF00571 CBS domain LI62_RS20605 PF01380 SIS domain LI62_RS20610 PF08282 haloacid dehalogenase-like hydrolase LI62_RS20615 PF06835 Lipopolysaccharide-assembly, LptC-related LI62_RS20620 PF03968 OstA-like protein LI62_RS20625 PF00005 ABC transporter LI62_RS20625 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI62_RS20630 PF00309 LI62_RS20630 LI62_RS20630 PF04552 Sigma-54, DNA binding domain LI62_RS20630 PF04963 Sigma-54 factor, core binding domain LI62_RS20635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LI62_RS20640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS20645 PF03668 LI62_RS20645 LI62_RS20650 PF00381 PTS HPr component phosphorylation site LI62_RS20655 PF00912 Transglycosylase LI62_RS20665 PF00072 Response regulator receiver domain LI62_RS20665 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS20665 PF00989 PAS fold LI62_RS20665 PF01627 Hpt domain LI62_RS20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS20670 PF03739 LI62_RS20670 LI62_RS20675 PF03739 LI62_RS20675 LI62_RS20680 PF00883 Cytosol aminopeptidase family, catalytic domain LI62_RS20680 PF02789 Cytosol aminopeptidase family, N-terminal domain LI62_RS20685 PF04364 DNA polymerase III chi subunit, HolC LI62_RS20690 PF00133 tRNA synthetases class I (I, L, M and V) LI62_RS20690 PF08264 Anticodon-binding domain of tRNA LI62_RS20690 PF10458 Valyl tRNA synthetase tRNA binding arm LI62_RS20695 PF00583 Acetyltransferase (GNAT) family LI62_RS20700 PF00107 Zinc-binding dehydrogenase LI62_RS20700 PF08240 Alcohol dehydrogenase GroES-like domain LI62_RS20705 PF02733 Dak1 domain LI62_RS20705 PF02734 DAK2 domain LI62_RS20710 PF05872 LI62_RS20710 LI62_RS20715 PF04055 Radical SAM superfamily LI62_RS20715 PF16199 LI62_RS20715 LI62_RS20720 PF00310 Glutamine amidotransferases class-II LI62_RS20720 PF01493 GXGXG motif LI62_RS20720 PF01645 Conserved region in glutamate synthase LI62_RS20720 PF04898 Glutamate synthase central domain LI62_RS20725 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS20725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LI62_RS20730 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LI62_RS20735 PF07969 Amidohydrolase family LI62_RS20740 PF04074 Domain of unknown function (DUF386) LI62_RS20745 PF00480 ROK family LI62_RS20750 PF07690 Major Facilitator Superfamily LI62_RS20755 PF00701 Dihydrodipicolinate synthetase family LI62_RS20760 PF00392 Bacterial regulatory proteins, gntR family LI62_RS20760 PF07729 FCD domain LI62_RS20765 PF04386 Stringent starvation protein B LI62_RS20770 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS20770 PF02798 Glutathione S-transferase, N-terminal domain LI62_RS20775 PF00380 Ribosomal protein S9/S16 LI62_RS20780 PF00572 Ribosomal protein L13 LI62_RS20785 PF03969 AFG1-like ATPase LI62_RS20790 PF06295 LI62_RS20790 LI62_RS20795 PF00595 PDZ domain (Also known as DHR or GLGF) LI62_RS20795 PF13180 PDZ domain LI62_RS20795 PF13365 Trypsin-like peptidase domain LI62_RS20800 PF13180 PDZ domain LI62_RS20800 PF13365 Trypsin-like peptidase domain LI62_RS20805 PF00056 lactate/malate dehydrogenase, NAD binding domain LI62_RS20805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LI62_RS20810 PF01316 Arginine repressor, DNA binding domain LI62_RS20810 PF02863 Arginine repressor, C-terminal domain LI62_RS20815 PF07338 Protein of unknown function (DUF1471) LI62_RS20820 PF01337 Barstar (barnase inhibitor) LI62_RS20825 PF00171 Aldehyde dehydrogenase family LI62_RS20830 PF04632 LI62_RS20830 LI62_RS20835 PF13437 HlyD family secretion protein LI62_RS20835 PF13533 Biotin-lipoyl like LI62_RS20840 PF07869 LI62_RS20840 LI62_RS20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS20845 PF03466 LysR substrate binding domain LI62_RS20850 PF01523 Putative modulator of DNA gyrase LI62_RS20855 PF13116 LI62_RS20855 LI62_RS20855 PF13502 LI62_RS20855 LI62_RS20860 PF00575 S1 RNA binding domain LI62_RS20860 PF10150 Ribonuclease E/G family LI62_RS20865 PF02545 Maf-like protein LI62_RS20870 PF04093 LI62_RS20870 LI62_RS20875 PF04085 rod shape-determining protein MreC LI62_RS20880 PF06723 MreB/Mbl protein LI62_RS20885 PF00563 EAL domain LI62_RS20885 PF00990 GGDEF domain LI62_RS20885 PF17157 LI62_RS20885 LI62_RS20890 PF00107 Zinc-binding dehydrogenase LI62_RS20895 PF00174 Oxidoreductase molybdopterin binding domain LI62_RS20900 PF01794 LI62_RS20900 LI62_RS20905 PF01220 Dehydroquinase class II LI62_RS20910 PF00364 Biotin-requiring enzyme LI62_RS20915 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LI62_RS20915 PF02785 Biotin carboxylase C-terminal domain LI62_RS20915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LI62_RS20920 PF06196 LI62_RS20920 LI62_RS20925 PF00474 Sodium:solute symporter family LI62_RS20930 PF06325 Ribosomal protein L11 methyltransferase (PrmA) LI62_RS20935 PF00194 Eukaryotic-type carbonic anhydrase LI62_RS20940 PF01207 Dihydrouridine synthase (Dus) LI62_RS20945 PF02954 Bacterial regulatory protein, Fis family LI62_RS20950 PF10831 LI62_RS20950 LI62_RS20955 PF00563 EAL domain LI62_RS20955 PF00990 GGDEF domain LI62_RS20955 PF03707 LI62_RS20955 LI62_RS20960 PF00440 Bacterial regulatory proteins, tetR family LI62_RS20960 PF08361 MAATS-type transcriptional repressor, C-terminal region LI62_RS20965 PF00529 HlyD family secretion protein LI62_RS20965 PF16576 LI62_RS20965 LI62_RS20970 PF00873 AcrB/AcrD/AcrF family LI62_RS21010 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS21015 PF07369 Protein of unknown function (DUF1488) LI62_RS21020 PF01488 Shikimate / quinate 5-dehydrogenase LI62_RS21020 PF08501 Shikimate dehydrogenase substrate binding domain LI62_RS21025 PF01300 Telomere recombination LI62_RS21030 PF01396 LI62_RS21030 LI62_RS21035 PF04361 LI62_RS21035 LI62_RS21040 PF02481 DNA recombination-mediator protein A LI62_RS21045 PF01327 Polypeptide deformylase LI62_RS21050 PF00551 Formyl transferase LI62_RS21050 PF02911 Formyl transferase, C-terminal domain LI62_RS21055 PF01029 NusB family LI62_RS21055 PF01189 NOL1/NOP2/sun family LI62_RS21060 PF02080 TrkA-C domain LI62_RS21060 PF02254 TrkA-N domain LI62_RS21065 PF01741 Large-conductance mechanosensitive channel, MscL LI62_RS21070 PF03889 LI62_RS21070 LI62_RS21075 PF13411 MerR HTH family regulatory protein LI62_RS21080 PF09350 LI62_RS21080 LI62_RS21085 PF01196 Ribosomal protein L17 LI62_RS21090 PF01000 RNA polymerase Rpb3/RpoA insert domain LI62_RS21090 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LI62_RS21090 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LI62_RS21095 PF00163 Ribosomal protein S4/S9 N-terminal domain LI62_RS21095 PF01479 S4 domain LI62_RS21100 PF00411 Ribosomal protein S11 LI62_RS21105 PF00416 Ribosomal protein S13/S18 LI62_RS21110 PF00444 Ribosomal protein L36 LI62_RS21115 PF00344 SecY translocase LI62_RS21120 PF00828 Ribosomal protein L18e/L15 LI62_RS21125 PF00327 Ribosomal protein L30p/L7e LI62_RS21130 PF00333 Ribosomal protein S5, N-terminal domain LI62_RS21130 PF03719 Ribosomal protein S5, C-terminal domain LI62_RS21135 PF00861 Ribosomal L18p/L5e family LI62_RS21140 PF00347 Ribosomal protein L6 LI62_RS21145 PF00410 Ribosomal protein S8 LI62_RS21150 PF00253 Ribosomal protein S14p/S29e LI62_RS21155 PF00281 Ribosomal protein L5 LI62_RS21155 PF00673 ribosomal L5P family C-terminus LI62_RS21160 PF17136 LI62_RS21160 LI62_RS21165 PF00238 Ribosomal protein L14p/L23e LI62_RS21170 PF00366 Ribosomal protein S17 LI62_RS21175 PF00831 Ribosomal L29 protein LI62_RS21180 PF00252 Ribosomal protein L16p/L10e LI62_RS21185 PF00189 Ribosomal protein S3, C-terminal domain LI62_RS21185 PF07650 KH domain LI62_RS21190 PF00237 Ribosomal protein L22p/L17e LI62_RS21195 PF00203 Ribosomal protein S19 LI62_RS21200 PF00181 Ribosomal Proteins L2, RNA binding domain LI62_RS21200 PF03947 Ribosomal Proteins L2, C-terminal domain LI62_RS21205 PF00276 Ribosomal protein L23 LI62_RS21210 PF00573 Ribosomal protein L4/L1 family LI62_RS21215 PF00297 Ribosomal protein L3 LI62_RS21220 PF00338 Ribosomal protein S10p/S20e LI62_RS21225 PF01478 Type IV leader peptidase family LI62_RS21230 PF00210 Ferritin-like domain LI62_RS21235 PF04324 BFD-like [2Fe-2S] binding domain LI62_RS21240 PF00009 Elongation factor Tu GTP binding domain LI62_RS21240 PF03143 Elongation factor Tu C-terminal domain LI62_RS21240 PF03144 Elongation factor Tu domain 2 LI62_RS21245 PF00009 Elongation factor Tu GTP binding domain LI62_RS21245 PF00679 Elongation factor G C-terminus LI62_RS21245 PF03144 Elongation factor Tu domain 2 LI62_RS21245 PF03764 Elongation factor G, domain IV LI62_RS21245 PF14492 Elongation Factor G, domain II LI62_RS21250 PF00177 Ribosomal protein S7p/S5e LI62_RS21255 PF00164 Ribosomal protein S12/S23 LI62_RS21260 PF04077 DsrH like protein LI62_RS21265 PF02635 DsrE/DsrF-like family LI62_RS21270 PF02635 DsrE/DsrF-like family LI62_RS21275 PF08348 LI62_RS21275 LI62_RS21275 PF13309 LI62_RS21275 LI62_RS21280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI62_RS21280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LI62_RS21285 PF04102 SlyX LI62_RS21290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LI62_RS21295 PF09526 LI62_RS21295 LI62_RS21300 PF00999 Sodium/hydrogen exchanger family LI62_RS21300 PF02254 TrkA-N domain LI62_RS21305 PF02525 Flavodoxin-like fold LI62_RS21310 PF00005 ABC transporter LI62_RS21310 PF12848 ABC transporter LI62_RS21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS21315 PF03466 LysR substrate binding domain LI62_RS21320 PF00698 Acyl transferase domain LI62_RS21325 PF10620 LI62_RS21325 LI62_RS21330 PF03547 LI62_RS21330 LI62_RS21335 PF06833 Malonate decarboxylase gamma subunit (MdcE) LI62_RS21340 PF01039 Carboxyl transferase domain LI62_RS21345 PF06857 LI62_RS21345 LI62_RS21350 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LI62_RS21355 PF16957 LI62_RS21355 LI62_RS21365 PF00561 alpha/beta hydrolase fold LI62_RS21370 PF06794 Uncharacterised protein family (UPF0270) LI62_RS21375 PF00485 Phosphoribulokinase / Uridine kinase family LI62_RS21380 PF02566 OsmC-like protein LI62_RS21385 PF00027 Cyclic nucleotide-binding domain LI62_RS21385 PF00325 Bacterial regulatory proteins, crp family LI62_RS21390 PF12805 LI62_RS21390 LI62_RS21390 PF13515 LI62_RS21390 LI62_RS21395 PF00202 Aminotransferase class-III LI62_RS21400 PF00117 Glutamine amidotransferase class-I LI62_RS21405 PF02661 Fic/DOC family LI62_RS21405 PF10832 LI62_RS21405 LI62_RS21410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LI62_RS21415 PF07690 Major Facilitator Superfamily LI62_RS21420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LI62_RS21420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LI62_RS21420 PF04324 BFD-like [2Fe-2S] binding domain LI62_RS21420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS21425 PF13806 Rieske-like [2Fe-2S] domain LI62_RS21430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LI62_RS21430 PF10414 Sirohaem synthase dimerisation region LI62_RS21430 PF13241 Putative NAD(P)-binding LI62_RS21430 PF14824 Sirohaem biosynthesis protein central LI62_RS21435 PF13978 LI62_RS21435 LI62_RS21440 PF00579 tRNA synthetases class I (W and Y) LI62_RS21445 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS21450 PF00834 Ribulose-phosphate 3 epimerase family LI62_RS21455 PF02086 D12 class N6 adenine-specific DNA methyltransferase LI62_RS21460 PF05036 Sporulation related domain LI62_RS21465 PF01761 3-dehydroquinate synthase LI62_RS21470 PF01202 Shikimate kinase LI62_RS21480 PF00263 LI62_RS21480 LI62_RS21480 PF03958 Bacterial type II/III secretion system short domain LI62_RS21485 PF10748 LI62_RS21485 LI62_RS21495 PF05137 LI62_RS21495 LI62_RS21505 PF00905 Penicillin binding protein transpeptidase domain LI62_RS21505 PF00912 Transglycosylase LI62_RS21505 PF17092 LI62_RS21505 LI62_RS21510 PF00293 NUDIX domain LI62_RS21520 PF07095 Intracellular growth attenuator protein IgaA LI62_RS21525 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS21530 PF01479 S4 domain LI62_RS21535 PF01430 Hsp33 protein LI62_RS21540 PF13687 LI62_RS21540 LI62_RS21545 PF01293 Phosphoenolpyruvate carboxykinase LI62_RS21550 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS21550 PF00672 HAMP domain LI62_RS21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS21555 PF00072 Response regulator receiver domain LI62_RS21555 PF00486 Transcriptional regulatory protein, C terminal LI62_RS21560 PF01272 Transcription elongation factor, GreA/GreB, C-term LI62_RS21560 PF03449 Transcription elongation factor, N-terminal LI62_RS21565 PF00575 S1 RNA binding domain LI62_RS21565 PF09371 Tex-like protein N-terminal domain LI62_RS21565 PF12836 Helix-hairpin-helix motif LI62_RS21565 PF16921 LI62_RS21565 LI62_RS21570 PF04023 FeoA domain LI62_RS21575 PF02421 Ferrous iron transport protein B LI62_RS21575 PF07664 LI62_RS21575 LI62_RS21575 PF07670 Nucleoside recognition LI62_RS21580 PF09012 FeoC like transcriptional regulator LI62_RS21585 PF00561 alpha/beta hydrolase fold LI62_RS21595 PF01106 NifU-like domain LI62_RS21595 PF01521 Iron-sulphur cluster biosynthesis LI62_RS21600 PF02447 LI62_RS21600 LI62_RS21605 PF02446 4-alpha-glucanotransferase LI62_RS21610 PF00343 Carbohydrate phosphorylase LI62_RS21615 PF00196 Bacterial regulatory proteins, luxR family LI62_RS21620 PF00455 LI62_RS21620 LI62_RS21620 PF08220 DeoR-like helix-turn-helix domain LI62_RS21625 PF01694 Rhomboid family LI62_RS21625 PF12122 Protein of unknown function (DUF3582) LI62_RS21630 PF00581 Rhodanese-like domain LI62_RS21640 PF01266 FAD dependent oxidoreductase LI62_RS21640 PF16901 LI62_RS21640 LI62_RS21645 PF00343 Carbohydrate phosphorylase LI62_RS21650 PF00534 Glycosyl transferases group 1 LI62_RS21650 PF08323 Starch synthase catalytic domain LI62_RS21655 PF00483 Nucleotidyl transferase LI62_RS21660 PF00128 Alpha amylase, catalytic domain LI62_RS21660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI62_RS21665 PF00128 Alpha amylase, catalytic domain LI62_RS21665 PF02806 Alpha amylase, C-terminal all-beta domain LI62_RS21665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LI62_RS21670 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI62_RS21670 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI62_RS21680 PF01914 LI62_RS21680 LI62_RS21685 PF02447 LI62_RS21685 LI62_RS21690 PF01202 Shikimate kinase LI62_RS21695 PF00356 Bacterial regulatory proteins, lacI family LI62_RS21695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS21700 PF02678 Pirin LI62_RS21705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LI62_RS21705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LI62_RS21710 PF00583 Acetyltransferase (GNAT) family LI62_RS21715 PF01019 Gamma-glutamyltranspeptidase LI62_RS21720 PF10956 LI62_RS21720 LI62_RS21725 PF03009 Glycerophosphoryl diester phosphodiesterase family LI62_RS21730 PF00005 ABC transporter LI62_RS21730 PF08402 TOBE domain LI62_RS21735 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS21740 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS21745 PF13416 Bacterial extracellular solute-binding protein LI62_RS21750 PF00005 ABC transporter LI62_RS21755 PF00005 ABC transporter LI62_RS21755 PF12399 Branched-chain amino acid ATP-binding cassette transporter LI62_RS21760 PF02653 LI62_RS21760 LI62_RS21760 PF11862 LI62_RS21760 LI62_RS21765 PF02653 LI62_RS21765 LI62_RS21770 PF13458 Periplasmic binding protein LI62_RS21780 PF15945 LI62_RS21780 LI62_RS21785 PF12568 Acetyltransferase (GNAT) domain LI62_RS21790 PF13458 Periplasmic binding protein LI62_RS21795 PF00202 Aminotransferase class-III LI62_RS21800 PF00140 Sigma-70 factor, region 1 LI62_RS21800 PF04542 Sigma-70 region 2 LI62_RS21800 PF04545 Sigma-70, region 4 LI62_RS21805 PF02687 LI62_RS21805 LI62_RS21810 PF00005 ABC transporter LI62_RS21815 PF00448 SRP54-type protein, GTPase domain LI62_RS21815 PF02881 SRP54-type protein, helical bundle domain LI62_RS21820 PF03602 Conserved hypothetical protein 95 LI62_RS21825 PF06611 LI62_RS21825 LI62_RS21830 PF10694 Protein of unknown function (DUF2500) LI62_RS21835 PF07947 LI62_RS21835 LI62_RS21845 PF06808 LI62_RS21845 LI62_RS21850 PF04290 LI62_RS21850 LI62_RS21855 PF03480 Bacterial extracellular solute-binding protein, family 7 LI62_RS21860 PF01206 Sulfurtransferase TusA LI62_RS21865 PF02592 LI62_RS21865 LI62_RS21870 PF08786 Domain of unknown function (DUF1795) LI62_RS21875 PF01594 LI62_RS21875 LI62_RS21880 PF13723 LI62_RS21880 LI62_RS21885 PF01553 Acyltransferase LI62_RS21890 PF00550 Phosphopantetheine attachment site LI62_RS21895 PF00550 Phosphopantetheine attachment site LI62_RS21905 PF00501 AMP-binding enzyme LI62_RS21910 PF07977 FabA-like domain LI62_RS21915 PF00535 Glycosyl transferase family 2 LI62_RS21920 PF13279 Thioesterase-like superfamily LI62_RS21925 PF03548 Outer membrane lipoprotein carrier protein LolA LI62_RS21930 PF03176 MMPL family LI62_RS21935 PF11659 LI62_RS21935 LI62_RS21940 PF00109 Beta-ketoacyl synthase, N-terminal domain LI62_RS21940 PF02801 Beta-ketoacyl synthase, C-terminal domain LI62_RS21950 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS21955 PF00109 Beta-ketoacyl synthase, N-terminal domain LI62_RS21955 PF02801 Beta-ketoacyl synthase, C-terminal domain LI62_RS21960 PF01648 4'-phosphopantetheinyl transferase superfamily LI62_RS21970 PF00893 Small Multidrug Resistance protein LI62_RS21975 PF02366 LI62_RS21975 LI62_RS21980 PF01522 Polysaccharide deacetylase LI62_RS21985 PF00551 Formyl transferase LI62_RS21985 PF01370 NAD dependent epimerase/dehydratase family LI62_RS21985 PF02911 Formyl transferase, C-terminal domain LI62_RS21990 PF00535 Glycosyl transferase family 2 LI62_RS21995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LI62_RS22000 PF05870 Phenolic acid decarboxylase (PAD) LI62_RS22005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS22005 PF03466 LysR substrate binding domain LI62_RS22010 PF00106 short chain dehydrogenase LI62_RS22015 PF12710 haloacid dehalogenase-like hydrolase LI62_RS22020 PF03741 LI62_RS22020 LI62_RS22035 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS22035 PF00672 HAMP domain LI62_RS22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS22040 PF00072 Response regulator receiver domain LI62_RS22040 PF00486 Transcriptional regulatory protein, C terminal LI62_RS22045 PF05425 LI62_RS22045 LI62_RS22050 PF04234 CopC domain LI62_RS22055 PF05275 LI62_RS22055 LI62_RS22060 PF00394 Multicopper oxidase LI62_RS22060 PF07731 Multicopper oxidase LI62_RS22060 PF07732 Multicopper oxidase LI62_RS22070 PF01551 Peptidase family M23 LI62_RS22075 PF11666 LI62_RS22075 LI62_RS22080 PF00122 E1-E2 ATPase LI62_RS22080 PF00702 haloacid dehalogenase-like hydrolase LI62_RS22080 PF04945 YHS domain LI62_RS22085 PF04214 LI62_RS22085 LI62_RS22090 PF00873 AcrB/AcrD/AcrF family LI62_RS22095 PF16576 LI62_RS22095 LI62_RS22100 PF11604 Copper binding periplasmic protein CusF LI62_RS22105 PF02321 Outer membrane efflux protein LI62_RS22115 PF00072 Response regulator receiver domain LI62_RS22115 PF00486 Transcriptional regulatory protein, C terminal LI62_RS22120 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS22120 PF00672 HAMP domain LI62_RS22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS22130 PF03713 Domain of unknown function (DUF305) LI62_RS22135 PF13175 AAA ATPase domain LI62_RS22145 PF01381 Helix-turn-helix LI62_RS22155 PF06527 LI62_RS22155 LI62_RS22155 PF15978 LI62_RS22155 LI62_RS22160 PF13401 AAA domain LI62_RS22170 PF08722 TnsA endonuclease N terminal LI62_RS22175 PF03486 HI0933-like protein LI62_RS22180 PF01384 LI62_RS22180 LI62_RS22185 PF10625 LI62_RS22185 LI62_RS22190 PF00582 Universal stress protein family LI62_RS22195 PF04445 Putative SAM-dependent methyltransferase LI62_RS22200 PF01432 Peptidase family M3 LI62_RS22205 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ LI62_RS22210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI62_RS22210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS22220 PF01204 Trehalase LI62_RS22230 PF13302 Acetyltransferase (GNAT) domain LI62_RS22240 PF00196 Bacterial regulatory proteins, luxR family LI62_RS22245 PF13561 Enoyl-(Acyl carrier protein) reductase LI62_RS22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS22250 PF03466 LysR substrate binding domain LI62_RS22255 PF03631 LI62_RS22255 LI62_RS22260 PF07690 Major Facilitator Superfamily LI62_RS22265 PF05170 LI62_RS22265 LI62_RS22270 PF00563 EAL domain LI62_RS22275 PF00294 pfkB family carbohydrate kinase LI62_RS22280 PF00675 Insulinase (Peptidase family M16) LI62_RS22280 PF05193 Peptidase M16 inactive domain LI62_RS22285 PF00375 Sodium:dicarboxylate symporter family LI62_RS22290 PF00563 EAL domain LI62_RS22290 PF00672 HAMP domain LI62_RS22290 PF00990 GGDEF domain LI62_RS22290 PF17154 LI62_RS22290 LI62_RS22295 PF05420 LI62_RS22295 LI62_RS22295 PF13181 Tetratricopeptide repeat LI62_RS22295 PF13432 Tetratricopeptide repeat LI62_RS22295 PF14559 Tetratricopeptide repeat LI62_RS22300 PF01270 Glycosyl hydrolases family 8 LI62_RS22305 PF03170 Bacterial cellulose synthase subunit LI62_RS22310 PF00535 Glycosyl transferase family 2 LI62_RS22310 PF07238 PilZ domain LI62_RS22320 PF10945 LI62_RS22320 LI62_RS22325 PF10995 LI62_RS22325 LI62_RS22330 PF11120 LI62_RS22330 LI62_RS22335 PF11658 LI62_RS22335 LI62_RS22340 PF02237 Biotin protein ligase C terminal domain LI62_RS22340 PF03099 Biotin/lipoate A/B protein ligase family LI62_RS22340 PF08279 HTH domain LI62_RS22345 PF01565 FAD binding domain LI62_RS22345 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LI62_RS22375 PF12724 Flavodoxin domain LI62_RS22380 PF02386 Cation transport protein LI62_RS22385 PF01205 Uncharacterized protein family UPF0029 LI62_RS22385 PF09186 Domain of unknown function (DUF1949) LI62_RS22390 PF00557 Metallopeptidase family M24 LI62_RS22395 PF00378 Enoyl-CoA hydratase/isomerase family LI62_RS22395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LI62_RS22395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LI62_RS22400 PF00108 Thiolase, N-terminal domain LI62_RS22400 PF02803 Thiolase, C-terminal domain LI62_RS22405 PF02092 LI62_RS22405 LI62_RS22405 PF05746 DALR anticodon binding domain LI62_RS22410 PF02091 Glycyl-tRNA synthetase alpha subunit LI62_RS22415 PF13983 LI62_RS22415 LI62_RS22420 PF01757 LI62_RS22420 LI62_RS22425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS22425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS22435 PF13407 Periplasmic binding protein domain LI62_RS22440 PF00005 ABC transporter LI62_RS22445 PF02653 LI62_RS22445 LI62_RS22450 PF12833 Helix-turn-helix domain LI62_RS22450 PF13377 Periplasmic binding protein-like domain LI62_RS22455 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LI62_RS22460 PF00128 Alpha amylase, catalytic domain LI62_RS22465 PF00155 Aminotransferase class I and II LI62_RS22470 PF12800 4Fe-4S binding domain LI62_RS22470 PF13247 4Fe-4S dicluster domain LI62_RS22475 PF01614 Bacterial transcriptional regulator LI62_RS22475 PF09339 IclR helix-turn-helix domain LI62_RS22480 PF02615 Malate/L-lactate dehydrogenase LI62_RS22485 PF04074 Domain of unknown function (DUF386) LI62_RS22490 PF16154 LI62_RS22490 LI62_RS22495 PF07690 Major Facilitator Superfamily LI62_RS22500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS22500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS22505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS22510 PF01261 Xylose isomerase-like TIM barrel LI62_RS22515 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS22520 PF02311 AraC-like ligand binding domain LI62_RS22520 PF12833 Helix-turn-helix domain LI62_RS22525 PF13347 MFS/sugar transport protein LI62_RS22530 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) LI62_RS22535 PF15919 LI62_RS22535 LI62_RS22540 PF00171 Aldehyde dehydrogenase family LI62_RS22545 PF00480 ROK family LI62_RS22550 PF00009 Elongation factor Tu GTP binding domain LI62_RS22550 PF03144 Elongation factor Tu domain 2 LI62_RS22550 PF09106 Elongation factor SelB, winged helix LI62_RS22550 PF09107 Elongation factor SelB, winged helix LI62_RS22555 PF03841 L-seryl-tRNA selenium transferase LI62_RS22555 PF12390 LI62_RS22555 LI62_RS22560 PF00043 Glutathione S-transferase, C-terminal domain LI62_RS22560 PF13417 Glutathione S-transferase, N-terminal domain LI62_RS22565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LI62_RS22565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LI62_RS22565 PF02378 Phosphotransferase system, EIIC LI62_RS22570 PF01232 Mannitol dehydrogenase Rossmann domain LI62_RS22570 PF08125 Mannitol dehydrogenase C-terminal domain LI62_RS22575 PF05068 Mannitol repressor LI62_RS22580 PF10928 Protein of unknown function (DUF2810) LI62_RS22585 PF00419 Fimbrial protein LI62_RS22590 PF00577 Outer membrane usher protein LI62_RS22590 PF13953 PapC C-terminal domain LI62_RS22590 PF13954 PapC N-terminal domain LI62_RS22595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS22595 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS22600 PF00419 Fimbrial protein LI62_RS22605 PF02652 LI62_RS22605 LI62_RS22610 PF00392 Bacterial regulatory proteins, gntR family LI62_RS22610 PF07729 FCD domain LI62_RS22615 PF01070 FMN-dependent dehydrogenase LI62_RS22620 PF07690 Major Facilitator Superfamily LI62_RS22625 PF00588 SpoU rRNA Methylase family LI62_RS22630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LI62_RS22630 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain LI62_RS22635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS22635 PF03466 LysR substrate binding domain LI62_RS22640 PF00291 Pyridoxal-phosphate dependent enzyme LI62_RS22640 PF00585 C-terminal regulatory domain of Threonine dehydratase LI62_RS22645 PF00920 Dehydratase family LI62_RS22650 PF01063 Aminotransferase class IV LI62_RS22655 PF13710 ACT domain LI62_RS22660 PF00205 Thiamine pyrophosphate enzyme, central domain LI62_RS22660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LI62_RS22660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LI62_RS22665 PF01078 Magnesium chelatase, subunit ChlI LI62_RS22665 PF13335 LI62_RS22665 LI62_RS22665 PF13541 Subunit ChlI of Mg-chelatase LI62_RS22670 PF04219 LI62_RS22670 LI62_RS22675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS22675 PF03466 LysR substrate binding domain LI62_RS22715 PF01177 Asp/Glu/Hydantoin racemase LI62_RS22720 PF00593 TonB dependent receptor LI62_RS22720 PF07715 TonB-dependent Receptor Plug Domain LI62_RS22725 PF05958 tRNA (Uracil-5-)-methyltransferase LI62_RS22730 PF07226 LI62_RS22730 LI62_RS22735 PF00440 Bacterial regulatory proteins, tetR family LI62_RS22740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LI62_RS22740 PF07992 Pyridine nucleotide-disulphide oxidoreductase LI62_RS22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS22745 PF03466 LysR substrate binding domain LI62_RS22750 PF00206 Lyase LI62_RS22750 PF14698 Argininosuccinate lyase C-terminal LI62_RS22755 PF00696 Amino acid kinase family LI62_RS22760 PF01118 Semialdehyde dehydrogenase, NAD binding domain LI62_RS22760 PF02774 Semialdehyde dehydrogenase, dimerisation domain LI62_RS22765 PF01546 Peptidase family M20/M25/M40 LI62_RS22765 PF07687 Peptidase dimerisation domain LI62_RS22770 PF00311 Phosphoenolpyruvate carboxylase LI62_RS22780 PF00465 Iron-containing alcohol dehydrogenase LI62_RS22785 PF00141 Peroxidase LI62_RS22790 PF02219 Methylenetetrahydrofolate reductase LI62_RS22795 PF00696 Amino acid kinase family LI62_RS22795 PF00742 Homoserine dehydrogenase LI62_RS22795 PF03447 Homoserine dehydrogenase, NAD binding domain LI62_RS22800 PF01053 Cys/Met metabolism PLP-dependent enzyme LI62_RS22805 PF01340 Met Apo-repressor, MetJ LI62_RS22810 PF01197 Ribosomal protein L31 LI62_RS22815 PF00270 DEAD/DEAH box helicase LI62_RS22815 PF00271 Helicase conserved C-terminal domain LI62_RS22820 PF00356 Bacterial regulatory proteins, lacI family LI62_RS22820 PF13377 Periplasmic binding protein-like domain LI62_RS22825 PF05036 Sporulation related domain LI62_RS22830 PF00227 Proteasome subunit LI62_RS22835 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS22835 PF07724 AAA domain (Cdc48 subfamily) LI62_RS22835 PF10431 C-terminal, D2-small domain, of ClpB protein LI62_RS22840 PF01040 UbiA prenyltransferase family LI62_RS22845 PF03737 Demethylmenaquinone methyltransferase LI62_RS22855 PF06005 Protein of unknown function (DUF904) LI62_RS22860 PF00230 Major intrinsic protein LI62_RS22865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS22865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS22870 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LI62_RS22875 PF00175 Oxidoreductase NAD-binding domain LI62_RS22875 PF00970 Oxidoreductase FAD-binding domain LI62_RS22880 PF05656 LI62_RS22880 LI62_RS22885 PF07305 LI62_RS22885 LI62_RS22890 PF00121 Triosephosphate isomerase LI62_RS22895 PF00939 Sodium:sulfate symporter transmembrane region LI62_RS22900 PF02611 CDP-diacylglycerol pyrophosphatase LI62_RS22905 PF13531 Bacterial extracellular solute-binding protein LI62_RS22910 PF00365 Phosphofructokinase LI62_RS22915 PF01545 Cation efflux family LI62_RS22915 PF16916 LI62_RS22915 LI62_RS22920 PF04606 LI62_RS22920 LI62_RS22925 PF05954 Phage late control gene D protein (GPD) LI62_RS22930 PF04860 Phage portal protein LI62_RS22935 PF00082 Subtilase family LI62_RS22940 PF00004 ATPase family associated with various cellular activities (AAA) LI62_RS22950 PF07813 LTXXQ motif family protein LI62_RS22955 PF00072 Response regulator receiver domain LI62_RS22955 PF00486 Transcriptional regulatory protein, C terminal LI62_RS22960 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS22960 PF00672 HAMP domain LI62_RS22960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS22960 PF16527 LI62_RS22960 LI62_RS22965 PF03473 MOSC domain LI62_RS22965 PF03475 3-alpha domain LI62_RS22970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LI62_RS22970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LI62_RS22975 PF06379 LI62_RS22975 LI62_RS22980 PF02311 AraC-like ligand binding domain LI62_RS22980 PF12833 Helix-turn-helix domain LI62_RS22985 PF02311 AraC-like ligand binding domain LI62_RS22985 PF12833 Helix-turn-helix domain LI62_RS22995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LI62_RS22995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LI62_RS23000 PF06134 L-rhamnose isomerase (RhaA) LI62_RS23005 PF00596 Class II Aldolase and Adducin N-terminal domain LI62_RS23010 PF13407 Periplasmic binding protein domain LI62_RS23015 PF00005 ABC transporter LI62_RS23020 PF02653 LI62_RS23020 LI62_RS23025 PF02653 LI62_RS23025 LI62_RS23030 PF00465 Iron-containing alcohol dehydrogenase LI62_RS23035 PF05336 Domain of unknown function (DUF718) LI62_RS23040 PF01306 LacY proton/sugar symporter LI62_RS23045 PF02065 Melibiase LI62_RS23045 PF16874 LI62_RS23045 LI62_RS23045 PF16875 LI62_RS23045 LI62_RS23050 PF00356 Bacterial regulatory proteins, lacI family LI62_RS23050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LI62_RS23055 PF01381 Helix-turn-helix LI62_RS23055 PF07883 Cupin domain LI62_RS23060 PF03591 LI62_RS23060 LI62_RS23065 PF05437 LI62_RS23065 LI62_RS23075 PF00577 Outer membrane usher protein LI62_RS23075 PF13953 PapC C-terminal domain LI62_RS23075 PF13954 PapC N-terminal domain LI62_RS23080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS23085 PF06551 LI62_RS23085 LI62_RS23090 PF07338 Protein of unknown function (DUF1471) LI62_RS23095 PF02634 FdhD/NarQ family LI62_RS23100 PF00384 Molybdopterin oxidoreductase LI62_RS23100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS23105 PF00384 Molybdopterin oxidoreductase LI62_RS23105 PF01568 Molydopterin dinucleotide binding domain LI62_RS23110 PF09163 Formate dehydrogenase N, transmembrane LI62_RS23110 PF13247 4Fe-4S dicluster domain LI62_RS23115 PF01292 Prokaryotic cytochrome b561 LI62_RS23120 PF04216 Protein involved in formate dehydrogenase formation LI62_RS23125 PF01850 PIN domain LI62_RS23130 PF01402 Ribbon-helix-helix protein, copG family LI62_RS23135 PF07859 alpha/beta hydrolase fold LI62_RS23140 PF09500 Putative thioesterase (yiiD_Cterm) LI62_RS23140 PF13673 Acetyltransferase (GNAT) domain LI62_RS23145 PF02580 D-Tyr-tRNA(Tyr) deacylase LI62_RS23150 PF03631 LI62_RS23150 LI62_RS23155 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS23160 PF00455 LI62_RS23160 LI62_RS23160 PF08220 DeoR-like helix-turn-helix domain LI62_RS23165 PF00294 pfkB family carbohydrate kinase LI62_RS23170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LI62_RS23170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LI62_RS23175 PF01791 DeoC/LacD family aldolase LI62_RS23180 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LI62_RS23185 PF01055 Glycosyl hydrolases family 31 LI62_RS23190 PF13347 MFS/sugar transport protein LI62_RS23195 PF13347 MFS/sugar transport protein LI62_RS23200 PF06178 Oligogalacturonate-specific porin protein (KdgM) LI62_RS23205 PF00009 Elongation factor Tu GTP binding domain LI62_RS23205 PF00679 Elongation factor G C-terminus LI62_RS23205 PF03144 Elongation factor Tu domain 2 LI62_RS23210 PF00120 Glutamine synthetase, catalytic domain LI62_RS23210 PF03951 Glutamine synthetase, beta-Grasp domain LI62_RS23215 PF00512 His Kinase A (phospho-acceptor) domain LI62_RS23215 PF00989 PAS fold LI62_RS23215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LI62_RS23220 PF00072 Response regulator receiver domain LI62_RS23220 PF00158 Sigma-54 interaction domain LI62_RS23220 PF02954 Bacterial regulatory protein, Fis family LI62_RS23230 PF04055 Radical SAM superfamily LI62_RS23230 PF06969 HemN C-terminal domain LI62_RS23235 PF04220 LI62_RS23235 LI62_RS23240 PF01926 50S ribosome-binding GTPase LI62_RS23245 PF00476 DNA polymerase family A LI62_RS23245 PF01367 5'-3' exonuclease, C-terminal SAM fold LI62_RS23245 PF01612 3'-5' exonuclease LI62_RS23245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LI62_RS23250 PF01553 Acyltransferase LI62_RS23255 PF01323 DSBA-like thioredoxin domain LI62_RS23260 PF01636 Phosphotransferase enzyme family LI62_RS23265 PF06288 Protein of unknown function (DUF1040) LI62_RS23270 PF12804 MobA-like NTP transferase domain LI62_RS23275 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LI62_RS23300 PF00392 Bacterial regulatory proteins, gntR family LI62_RS23300 PF07729 FCD domain LI62_RS23305 PF07690 Major Facilitator Superfamily LI62_RS23310 PF00356 Bacterial regulatory proteins, lacI family LI62_RS23310 PF13377 Periplasmic binding protein-like domain LI62_RS23315 PF00294 pfkB family carbohydrate kinase LI62_RS23320 PF13407 Periplasmic binding protein domain LI62_RS23325 PF02653 LI62_RS23325 LI62_RS23330 PF00005 ABC transporter LI62_RS23335 PF05025 RbsD / FucU transport protein family LI62_RS23340 PF02705 LI62_RS23340 LI62_RS23345 PF07728 AAA domain (dynein-related subfamily) LI62_RS23345 PF12592 Protein of unknown function (DUF3763) LI62_RS23350 PF05762 VWA domain containing CoxE-like protein LI62_RS23355 PF03590 Aspartate-ammonia ligase LI62_RS23360 PF01037 AsnC family LI62_RS23360 PF13412 Winged helix-turn-helix DNA-binding LI62_RS23365 PF00258 Flavodoxin LI62_RS23370 PF01134 Glucose inhibited division protein A LI62_RS23370 PF13932 GidA associated domain 3 LI62_RS23375 PF02527 rRNA small subunit methyltransferase G LI62_RS23380 PF03899 LI62_RS23380 LI62_RS23385 PF00119 ATP synthase A chain LI62_RS23390 PF00137 ATP synthase subunit C LI62_RS23395 PF00430 ATP synthase B/B' CF(0) LI62_RS23400 PF00213 ATP synthase delta (OSCP) subunit LI62_RS23405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI62_RS23405 PF00306 ATP synthase alpha/beta chain, C terminal domain LI62_RS23405 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI62_RS23410 PF00231 ATP synthase LI62_RS23415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LI62_RS23415 PF02874 ATP synthase alpha/beta family, beta-barrel domain LI62_RS23420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LI62_RS23420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LI62_RS23425 PF00132 Bacterial transferase hexapeptide (six repeats) LI62_RS23425 PF12804 MobA-like NTP transferase domain LI62_RS23430 PF01380 SIS domain LI62_RS23430 PF13522 Glutamine amidotransferase domain LI62_RS23435 PF00419 Fimbrial protein LI62_RS23440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LI62_RS23440 PF02753 Pili assembly chaperone PapD, C-terminal domain LI62_RS23445 PF00577 Outer membrane usher protein LI62_RS23445 PF13953 PapC C-terminal domain LI62_RS23445 PF13954 PapC N-terminal domain LI62_RS23450 PF00419 Fimbrial protein LI62_RS23455 PF12849 PBP superfamily domain LI62_RS23460 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS23465 PF00528 Binding-protein-dependent transport system inner membrane component LI62_RS23470 PF00005 ABC transporter LI62_RS23475 PF01895 PhoU domain LI62_RS23480 PF13419 Haloacid dehalogenase-like hydrolase LI62_RS23485 PF00860 Permease family LI62_RS23490 PF03358 NADPH-dependent FMN reductase LI62_RS23500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LI62_RS23500 PF03466 LysR substrate binding domain LI62_RS23505 PF07690 Major Facilitator Superfamily LI62_RS23510 PF01926 50S ribosome-binding GTPase LI62_RS23510 PF10396 GTP-binding protein TrmE N-terminus LI62_RS23510 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE LI62_RS23515 PF02096 60Kd inner membrane protein LI62_RS23515 PF14849 YidC periplasmic domain LI62_RS23520 PF00825 Ribonuclease P LI62_RS23525 PF00468 Ribosomal protein L34 LI62_RS23545 PF00712 DNA polymerase III beta subunit, N-terminal domain LI62_RS23660 PF11975 Family 4 glycosyl hydrolase C-terminal domain LI62_RS23695 PF00150 Cellulase (glycosyl hydrolase family 5) LI62_RS24110 PF08845 LI62_RS24110 LI62_RS24185 PF07690 Major Facilitator Superfamily LI62_RS24200 PF03358 NADPH-dependent FMN reductase LI62_RS24235 PF02040 LI62_RS24235 LI62_RS24250 PF13175 AAA ATPase domain LI62_RS24370 PF06082 LI62_RS24370 LI62_RS24525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LI62_RS24675 PF00324 Amino acid permease LI62_RS24785 PF02036 SCP-2 sterol transfer family