LI62_RS00275 SM00382 ATPases associated with a variety of cellular activities LI62_RS00275 SM00760 Bacterial dnaA protein helix-turn-helix domain LI62_RS00280 SM00480 DNA polymerase III beta subunit LI62_RS00290 SM00387 Histidine kinase-like ATPases LI62_RS00290 SM00433 TopoisomeraseII LI62_RS00300 SM00829 Enoylreductase LI62_RS00310 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS00310 SM00895 LI62_RS00310 LI62_RS00325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS00360 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS00360 SM00866 LI62_RS00360 LI62_RS00425 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS00440 SM00421 helix_turn_helix, Lux Regulon LI62_RS00440 SM00448 cheY-homologous receiver domain LI62_RS00445 SM00387 Histidine kinase-like ATPases LI62_RS00520 SM00354 helix_turn _helix lactose operon repressor LI62_RS00575 SM00052 Putative diguanylate phosphodiesterase LI62_RS00580 SM00421 helix_turn_helix, Lux Regulon LI62_RS00585 SM00421 helix_turn_helix, Lux Regulon LI62_RS00610 SM00862 Transcriptional regulatory protein, C terminal LI62_RS00655 SM00382 ATPases associated with a variety of cellular activities LI62_RS00675 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS00690 SM00095 Transthyretin LI62_RS00695 SM00422 helix_turn_helix, mercury resistance LI62_RS00730 SM00421 helix_turn_helix, Lux Regulon LI62_RS00735 SM00862 Transcriptional regulatory protein, C terminal LI62_RS00745 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS00845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS00885 SM00382 ATPases associated with a variety of cellular activities LI62_RS00895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS00945 SM00487 DEAD-like helicases superfamily LI62_RS00945 SM00490 helicase superfamily c-terminal domain LI62_RS00955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS00955 SM00954 Region found in RelA / SpoT proteins LI62_RS00960 SM01409 LI62_RS00960 LI62_RS00965 SM00072 Guanylate kinase homologues. LI62_RS00970 SM00532 Ligase N family LI62_RS01000 SM00226 Low molecular weight phosphatase family LI62_RS01060 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LI62_RS01060 SM01232 LI62_RS01060 LI62_RS01140 SM00829 Enoylreductase LI62_RS01175 SM00450 Rhodanese Homology Domain LI62_RS01195 SM00971 Serine acetyltransferase, N-terminal LI62_RS01215 SM00487 DEAD-like helicases superfamily LI62_RS01215 SM00490 helicase superfamily c-terminal domain LI62_RS01225 SM00357 Cold shock protein domain LI62_RS01225 SM00382 ATPases associated with a variety of cellular activities LI62_RS01225 SM00959 Rho termination factor, N-terminal domain LI62_RS01245 SM00984 UDP binding domain LI62_RS01330 SM01219 LI62_RS01330 LI62_RS01385 SM00341 Helicase and RNase D C-terminal LI62_RS01385 SM00487 DEAD-like helicases superfamily LI62_RS01385 SM00490 helicase superfamily c-terminal domain LI62_RS01385 SM00956 LI62_RS01385 LI62_RS01475 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LI62_RS01490 SM00382 ATPases associated with a variety of cellular activities LI62_RS01495 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS01510 SM00357 Cold shock protein domain LI62_RS01535 SM00354 helix_turn _helix lactose operon repressor LI62_RS01595 SM00382 ATPases associated with a variety of cellular activities LI62_RS01600 SM00382 ATPases associated with a variety of cellular activities LI62_RS01640 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LI62_RS01640 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LI62_RS01645 SM00649 Ribosomal protein L11/L12 LI62_RS01670 SM00663 RNA polymerase I subunit A N-terminus LI62_RS01685 SM00267 diguanylate cyclase LI62_RS01690 SM00876 Biotin and Thiamin Synthesis associated domain LI62_RS01745 SM00411 bacterial (prokaryotic) histone like domain LI62_RS01755 SM01209 LI62_RS01755 LI62_RS01755 SM01210 LI62_RS01755 LI62_RS01760 SM00798 AICARFT/IMPCHase bienzyme LI62_RS01760 SM00851 MGS-like domain LI62_RS01805 SM00346 helix_turn_helix isocitrate lyase regulation LI62_RS01810 SM01018 B12 binding domain LI62_RS01830 SM00363 S4 RNA-binding domain LI62_RS01895 SM00382 ATPases associated with a variety of cellular activities LI62_RS01920 SM00563 Phosphate acyltransferases LI62_RS01970 SM00829 Enoylreductase LI62_RS01975 SM00382 ATPases associated with a variety of cellular activities LI62_RS01980 SM01005 Alanine racemase, C-terminal domain LI62_RS02020 SM00267 diguanylate cyclase LI62_RS02025 SM00052 Putative diguanylate phosphodiesterase LI62_RS02030 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS02035 SM00422 helix_turn_helix, mercury resistance LI62_RS02090 SM00671 Sel1-like repeats. LI62_RS02115 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS02120 SM00448 cheY-homologous receiver domain LI62_RS02120 SM00862 Transcriptional regulatory protein, C terminal LI62_RS02150 SM00382 ATPases associated with a variety of cellular activities LI62_RS02155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS02155 SM00387 Histidine kinase-like ATPases LI62_RS02155 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS02155 SM00448 cheY-homologous receiver domain LI62_RS02175 SM00382 ATPases associated with a variety of cellular activities LI62_RS02210 SM00072 Guanylate kinase homologues. LI62_RS02220 SM00382 ATPases associated with a variety of cellular activities LI62_RS02225 SM00382 ATPases associated with a variety of cellular activities LI62_RS02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS02250 SM00866 LI62_RS02250 LI62_RS02265 SM00382 ATPases associated with a variety of cellular activities LI62_RS02335 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS02380 SM00883 Chaperonin 10 Kd subunit LI62_RS02415 SM00841 Elongation factor P, C-terminal LI62_RS02415 SM01185 LI62_RS02415 LI62_RS02430 SM00421 helix_turn_helix, Lux Regulon LI62_RS02500 SM00479 LI62_RS02500 LI62_RS02535 SM00646 LI62_RS02535 LI62_RS02540 SM00853 MutL C terminal dimerisation domain LI62_RS02540 SM01340 LI62_RS02540 LI62_RS02560 SM00244 prohibitin homologues LI62_RS02565 SM00244 prohibitin homologues LI62_RS02575 SM00788 Adenylosuccinate synthetase LI62_RS02585 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS02585 SM00357 Cold shock protein domain LI62_RS02585 SM00955 LI62_RS02585 LI62_RS02590 SM00967 RNA 2'-O ribose methyltransferase substrate binding LI62_RS02605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS02605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS02625 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS02625 SM01134 LI62_RS02625 LI62_RS02650 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS02660 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS02715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS02715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS02715 SM00319 Homologues of the ligand binding domain of Tar LI62_RS02725 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS02770 SM01091 Transporter associated domain LI62_RS02805 SM00382 ATPases associated with a variety of cellular activities LI62_RS02820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS02820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS02920 SM00872 Alpha mannosidase, middle domain LI62_RS02940 SM00642 Alpha-amylase domain LI62_RS02950 SM00354 helix_turn _helix lactose operon repressor LI62_RS02955 SM00831 Cation transporter/ATPase, N-terminus LI62_RS03015 SM01130 LI62_RS03015 LI62_RS03035 SM00346 helix_turn_helix isocitrate lyase regulation LI62_RS03140 SM00052 Putative diguanylate phosphodiesterase LI62_RS03165 SM00255 Toll - interleukin 1 - resistance LI62_RS03185 SM00487 DEAD-like helicases superfamily LI62_RS03220 SM00507 HNH nucleases LI62_RS03260 SM00354 helix_turn _helix lactose operon repressor LI62_RS03310 SM00448 cheY-homologous receiver domain LI62_RS03315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS03315 SM00220 Serine/Threonine protein kinases, catalytic domain LI62_RS03315 SM00387 Histidine kinase-like ATPases LI62_RS03315 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS03320 SM00421 helix_turn_helix, Lux Regulon LI62_RS03320 SM00448 cheY-homologous receiver domain LI62_RS03335 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LI62_RS03350 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS03360 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS03370 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS03385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS03390 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS03425 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS03445 SM00833 Cobalamin synthesis protein cobW C-terminal domain LI62_RS03465 SM00903 Flavin reductase like domain LI62_RS03475 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS03515 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS03520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS03520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS03520 SM00319 Homologues of the ligand binding domain of Tar LI62_RS03540 SM00382 ATPases associated with a variety of cellular activities LI62_RS03555 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS03570 SM00421 helix_turn_helix, Lux Regulon LI62_RS03575 SM00421 helix_turn_helix, Lux Regulon LI62_RS03595 SM00267 diguanylate cyclase LI62_RS03645 SM00749 bacterial OsmY and nodulation domain LI62_RS03675 SM01133 LI62_RS03675 LI62_RS03680 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain LI62_RS03710 SM00382 ATPases associated with a variety of cellular activities LI62_RS03715 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS03720 SM00829 Enoylreductase LI62_RS03730 SM00382 ATPases associated with a variety of cellular activities LI62_RS03750 SM00855 Phosphoglycerate mutase family LI62_RS03755 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS03755 SM00871 Bacterial transcription activator, effector binding domain LI62_RS03765 SM00448 cheY-homologous receiver domain LI62_RS03765 SM00862 Transcriptional regulatory protein, C terminal LI62_RS03810 SM00852 Probable molybdopterin binding domain LI62_RS03835 SM00271 DnaJ molecular chaperone homology domain LI62_RS03855 SM00904 Riboflavin kinase LI62_RS03915 SM00354 helix_turn _helix lactose operon repressor LI62_RS03925 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LI62_RS03930 SM00851 MGS-like domain LI62_RS03930 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LI62_RS03940 SM00869 Autotransporter beta-domain LI62_RS03970 SM00650 Ribosomal RNA adenine dimethylases LI62_RS03990 SM00271 DnaJ molecular chaperone homology domain LI62_RS04000 SM00487 DEAD-like helicases superfamily LI62_RS04000 SM00490 helicase superfamily c-terminal domain LI62_RS04005 SM00486 DNA polymerase type-B family LI62_RS04010 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS04025 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS04035 SM00382 ATPases associated with a variety of cellular activities LI62_RS04080 SM01329 LI62_RS04080 LI62_RS04085 SM00917 LeuA allosteric (dimerisation) domain LI62_RS04105 SM00354 helix_turn _helix lactose operon repressor LI62_RS04175 SM00842 Cell division protein FtsA LI62_RS04180 SM00864 Tubulin/FtsZ family, GTPase domain LI62_RS04180 SM00865 Tubulin/FtsZ family, C-terminal domain LI62_RS04195 SM00957 SecA DEAD-like domain LI62_RS04195 SM00958 SecA preprotein cross-linking domain LI62_RS04220 SM01240 LI62_RS04220 LI62_RS04245 SM00644 LI62_RS04245 LI62_RS04275 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS04275 SM00895 LI62_RS04275 LI62_RS04335 SM00564 beta-propeller repeat LI62_RS04345 SM00947 Carbonic anhydrase LI62_RS04350 SM00382 ATPases associated with a variety of cellular activities LI62_RS04450 SM00487 DEAD-like helicases superfamily LI62_RS04450 SM00490 helicase superfamily c-terminal domain LI62_RS04450 SM00847 Helicase associated domain (HA2) Add an annotation LI62_RS04485 SM00382 ATPases associated with a variety of cellular activities LI62_RS04530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS04535 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI62_RS04555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS04600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI62_RS04610 SM00935 Outer membrane protein (OmpH-like) LI62_RS04640 SM00481 DNA polymerase alpha chain like domain LI62_RS04660 SM00977 TilS substrate C-terminal domain LI62_RS04675 SM01322 LI62_RS04675 LI62_RS04715 SM00382 ATPases associated with a variety of cellular activities LI62_RS04715 SM00930 LI62_RS04715 LI62_RS04780 SM00257 Lysin motif LI62_RS04785 SM00849 Metallo-beta-lactamase superfamily LI62_RS04800 SM00479 LI62_RS04800 LI62_RS04810 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS04810 SM00895 LI62_RS04810 LI62_RS04815 SM00382 ATPases associated with a variety of cellular activities LI62_RS04820 SM00382 ATPases associated with a variety of cellular activities LI62_RS04880 SM00900 LI62_RS04880 LI62_RS04935 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LI62_RS04960 SM00052 Putative diguanylate phosphodiesterase LI62_RS04960 SM00267 diguanylate cyclase LI62_RS04970 SM00267 diguanylate cyclase LI62_RS04970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS04990 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS04995 SM00382 ATPases associated with a variety of cellular activities LI62_RS05010 SM00563 Phosphate acyltransferases LI62_RS05015 SM01004 Delta-aminolevulinic acid dehydratase LI62_RS05025 SM00869 Autotransporter beta-domain LI62_RS05085 SM00267 diguanylate cyclase LI62_RS05140 SM00448 cheY-homologous receiver domain LI62_RS05140 SM00862 Transcriptional regulatory protein, C terminal LI62_RS05145 SM00091 PAS domain LI62_RS05145 SM00387 Histidine kinase-like ATPases LI62_RS05145 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS05160 SM00642 Alpha-amylase domain LI62_RS05195 SM01323 LI62_RS05195 LI62_RS05260 SM00861 Transketolase, pyrimidine binding domain LI62_RS05275 SM00981 LI62_RS05275 LI62_RS05280 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS05280 SM00866 LI62_RS05280 LI62_RS05320 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS05325 SM00354 helix_turn _helix lactose operon repressor LI62_RS05345 SM00382 ATPases associated with a variety of cellular activities LI62_RS05420 SM00382 ATPases associated with a variety of cellular activities LI62_RS05420 SM00994 ClpX C4-type zinc finger LI62_RS05420 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS05425 SM00382 ATPases associated with a variety of cellular activities LI62_RS05425 SM00464 Found in ATP-dependent protease La (LON) LI62_RS05430 SM00411 bacterial (prokaryotic) histone like domain LI62_RS05440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI62_RS05470 SM00344 helix_turn_helix ASNC type LI62_RS05475 SM00382 ATPases associated with a variety of cellular activities LI62_RS05480 SM00382 ATPases associated with a variety of cellular activities LI62_RS05485 SM00938 Nitrogen regulatory protein P-II LI62_RS05520 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS05530 SM00354 helix_turn _helix lactose operon repressor LI62_RS05535 SM01038 Beta galactosidase small chain LI62_RS05550 SM00052 Putative diguanylate phosphodiesterase LI62_RS05570 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS05580 SM01266 LI62_RS05580 LI62_RS05635 SM00382 ATPases associated with a variety of cellular activities LI62_RS05645 SM00493 LI62_RS05645 LI62_RS05650 SM00387 Histidine kinase-like ATPases LI62_RS05700 SM00422 helix_turn_helix, mercury resistance LI62_RS05710 SM00244 prohibitin homologues LI62_RS05720 SM00382 ATPases associated with a variety of cellular activities LI62_RS05735 SM00822 LI62_RS05735 LI62_RS05745 SM00382 ATPases associated with a variety of cellular activities LI62_RS05760 SM00450 Rhodanese Homology Domain LI62_RS05770 SM01001 AIR carboxylase LI62_RS05785 SM00840 LI62_RS05785 LI62_RS05795 SM00354 helix_turn _helix lactose operon repressor LI62_RS05845 SM00421 helix_turn_helix, Lux Regulon LI62_RS05845 SM00448 cheY-homologous receiver domain LI62_RS05855 SM00052 Putative diguanylate phosphodiesterase LI62_RS05950 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS06155 SM00635 Bacterial Ig-like domain 2 LI62_RS06270 SM00354 helix_turn _helix lactose operon repressor LI62_RS06285 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS06295 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS06315 SM00849 Metallo-beta-lactamase superfamily LI62_RS06320 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS06340 SM00831 Cation transporter/ATPase, N-terminus LI62_RS06420 SM00382 ATPases associated with a variety of cellular activities LI62_RS06425 SM00382 ATPases associated with a variety of cellular activities LI62_RS06475 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS06485 SM00382 ATPases associated with a variety of cellular activities LI62_RS06515 SM00923 MbtH-like protein LI62_RS06520 SM00823 Phosphopantetheine attachment site LI62_RS06520 SM00824 Thioesterase LI62_RS06525 SM00382 ATPases associated with a variety of cellular activities LI62_RS06565 SM00822 LI62_RS06565 LI62_RS06585 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS06600 SM00382 ATPases associated with a variety of cellular activities LI62_RS06640 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS06680 SM00829 Enoylreductase LI62_RS06690 SM00903 Flavin reductase like domain LI62_RS06695 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS06765 SM00357 Cold shock protein domain LI62_RS06785 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS06805 SM00936 Penicillin-binding protein 5, C-terminal domain LI62_RS06865 SM00382 ATPases associated with a variety of cellular activities LI62_RS06880 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS06890 SM00116 Domain in cystathionine beta-synthase and other proteins. LI62_RS06890 SM01091 Transporter associated domain LI62_RS06905 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS07040 SM00448 cheY-homologous receiver domain LI62_RS07040 SM00862 Transcriptional regulatory protein, C terminal LI62_RS07045 SM00387 Histidine kinase-like ATPases LI62_RS07045 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS07085 SM00796 Allophanate hydrolase subunit 1 LI62_RS07090 SM00797 Allophanate hydrolase subunit 2 LI62_RS07100 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LI62_RS07100 SM01232 LI62_RS07100 LI62_RS07130 SM00861 Transketolase, pyrimidine binding domain LI62_RS07145 SM00881 CoA binding domain LI62_RS07150 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS07150 SM00866 LI62_RS07150 LI62_RS07160 SM00872 Alpha mannosidase, middle domain LI62_RS07270 SM00855 Phosphoglycerate mutase family LI62_RS07295 SM00382 ATPases associated with a variety of cellular activities LI62_RS07320 SM00382 ATPases associated with a variety of cellular activities LI62_RS07350 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS07350 SM00866 LI62_RS07350 LI62_RS07375 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS07375 SM00876 Biotin and Thiamin Synthesis associated domain LI62_RS07395 SM00382 ATPases associated with a variety of cellular activities LI62_RS07400 SM00487 DEAD-like helicases superfamily LI62_RS07400 SM00490 helicase superfamily c-terminal domain LI62_RS07410 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS07415 SM00852 Probable molybdopterin binding domain LI62_RS07445 SM00155 Phospholipase D. Active site motifs. LI62_RS07470 SM00382 ATPases associated with a variety of cellular activities LI62_RS07485 SM00487 DEAD-like helicases superfamily LI62_RS07485 SM00490 helicase superfamily c-terminal domain LI62_RS07490 SM00487 DEAD-like helicases superfamily LI62_RS07490 SM00488 LI62_RS07490 LI62_RS07490 SM00491 LI62_RS07490 LI62_RS07555 SM00382 ATPases associated with a variety of cellular activities LI62_RS07565 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS07565 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI62_RS07595 SM00529 Helix-turn-helix diphteria tox regulatory element LI62_RS07640 SM00382 ATPases associated with a variety of cellular activities LI62_RS07655 SM00382 ATPases associated with a variety of cellular activities LI62_RS07675 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS07675 SM00866 LI62_RS07675 LI62_RS07685 SM00382 ATPases associated with a variety of cellular activities LI62_RS07700 SM00354 helix_turn _helix lactose operon repressor LI62_RS07735 SM00852 Probable molybdopterin binding domain LI62_RS07745 SM00382 ATPases associated with a variety of cellular activities LI62_RS07765 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS07785 SM00936 Penicillin-binding protein 5, C-terminal domain LI62_RS07790 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS07790 SM01134 LI62_RS07790 LI62_RS07795 SM00014 Acid phosphatase homologues LI62_RS07835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS07885 SM00382 ATPases associated with a variety of cellular activities LI62_RS07915 SM00448 cheY-homologous receiver domain LI62_RS07915 SM00862 Transcriptional regulatory protein, C terminal LI62_RS07920 SM00387 Histidine kinase-like ATPases LI62_RS07920 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS07925 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS07925 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI62_RS07940 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS07940 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI62_RS07945 SM00382 ATPases associated with a variety of cellular activities LI62_RS07960 SM00644 LI62_RS07960 LI62_RS07990 SM00382 ATPases associated with a variety of cellular activities LI62_RS08040 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins LI62_RS08040 SM00495 Chitin-binding domain type 3 LI62_RS08040 SM00636 LI62_RS08040 LI62_RS08050 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins LI62_RS08050 SM00495 Chitin-binding domain type 3 LI62_RS08110 SM00382 ATPases associated with a variety of cellular activities LI62_RS08115 SM00357 Cold shock protein domain LI62_RS08125 SM00382 ATPases associated with a variety of cellular activities LI62_RS08125 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS08130 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS08140 SM00382 ATPases associated with a variety of cellular activities LI62_RS08145 SM00382 ATPases associated with a variety of cellular activities LI62_RS08155 SM00344 helix_turn_helix ASNC type LI62_RS08160 SM00843 LI62_RS08160 LI62_RS08170 SM00382 ATPases associated with a variety of cellular activities LI62_RS08180 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS08245 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS08250 SM00411 bacterial (prokaryotic) histone like domain LI62_RS08255 SM00849 Metallo-beta-lactamase superfamily LI62_RS08260 SM00382 ATPases associated with a variety of cellular activities LI62_RS08325 SM00849 Metallo-beta-lactamase superfamily LI62_RS08355 SM00382 ATPases associated with a variety of cellular activities LI62_RS08370 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS08395 SM00981 LI62_RS08395 LI62_RS08400 SM00382 ATPases associated with a variety of cellular activities LI62_RS08470 SM00851 MGS-like domain LI62_RS08480 SM00881 CoA binding domain LI62_RS08485 SM00992 Hemimethylated DNA-binding protein YccV like LI62_RS08490 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LI62_RS08520 SM00382 ATPases associated with a variety of cellular activities LI62_RS08540 SM00421 helix_turn_helix, Lux Regulon LI62_RS08560 SM00822 LI62_RS08560 LI62_RS08630 SM00903 Flavin reductase like domain LI62_RS08745 SM00481 DNA polymerase alpha chain like domain LI62_RS08775 SM00421 helix_turn_helix, Lux Regulon LI62_RS08800 SM00506 Appr-1"-p processing enzyme LI62_RS08840 SM00450 Rhodanese Homology Domain LI62_RS08845 SM00867 YceI-like domain LI62_RS08920 SM00858 LI62_RS08920 LI62_RS08965 SM00047 Lysozyme subfamily 2 LI62_RS08990 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS08995 SM00363 S4 RNA-binding domain LI62_RS09025 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LI62_RS09030 SM00822 LI62_RS09030 LI62_RS09040 SM00825 Beta-ketoacyl synthase LI62_RS09130 SM00257 Lysin motif LI62_RS09135 SM00487 DEAD-like helicases superfamily LI62_RS09135 SM00490 helicase superfamily c-terminal domain LI62_RS09135 SM00982 LI62_RS09135 LI62_RS09135 SM01058 CarD-like/TRCF domain LI62_RS09150 SM00382 ATPases associated with a variety of cellular activities LI62_RS09185 SM00382 ATPases associated with a variety of cellular activities LI62_RS09200 SM01321 LI62_RS09200 LI62_RS09205 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LI62_RS09210 SM00387 Histidine kinase-like ATPases LI62_RS09210 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS09215 SM00448 cheY-homologous receiver domain LI62_RS09215 SM00862 Transcriptional regulatory protein, C terminal LI62_RS09250 SM01329 LI62_RS09250 LI62_RS09260 SM00052 Putative diguanylate phosphodiesterase LI62_RS09270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS09270 SM00267 diguanylate cyclase LI62_RS09300 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS09370 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS09530 SM01252 LI62_RS09530 LI62_RS09570 SM00232 JAB/MPN domain LI62_RS09610 SM00763 PrkA AAA domain LI62_RS09625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS09640 SM00636 LI62_RS09640 LI62_RS09650 SM00870 LI62_RS09650 LI62_RS09670 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LI62_RS09670 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LI62_RS09670 SM00493 LI62_RS09670 LI62_RS09675 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LI62_RS09700 SM00450 Rhodanese Homology Domain LI62_RS09705 SM00382 ATPases associated with a variety of cellular activities LI62_RS09765 SM00465 GIY-YIG type nucleases (URI domain) LI62_RS09795 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS09810 SM01060 LI62_RS09810 LI62_RS09870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LI62_RS09895 SM00873 B3/4 domain LI62_RS09895 SM00874 tRNA synthetase B5 domain LI62_RS09895 SM00896 Ferredoxin-fold anticodon binding domain LI62_RS09900 SM00411 bacterial (prokaryotic) histone like domain LI62_RS09915 SM00382 ATPases associated with a variety of cellular activities LI62_RS09935 SM00382 ATPases associated with a variety of cellular activities LI62_RS09985 SM01217 LI62_RS09985 LI62_RS10045 SM00421 helix_turn_helix, Lux Regulon LI62_RS10050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS10070 SM00052 Putative diguanylate phosphodiesterase LI62_RS10070 SM01034 Sensors of blue-light using FAD LI62_RS10075 SM00422 helix_turn_helix, mercury resistance LI62_RS10090 SM00382 ATPases associated with a variety of cellular activities LI62_RS10110 SM00257 Lysin motif LI62_RS10130 SM00116 Domain in cystathionine beta-synthase and other proteins. LI62_RS10135 SM00382 ATPases associated with a variety of cellular activities LI62_RS10135 SM00930 LI62_RS10135 LI62_RS10165 SM00382 ATPases associated with a variety of cellular activities LI62_RS10170 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS10170 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI62_RS10190 SM00849 Metallo-beta-lactamase superfamily LI62_RS10195 SM00947 Carbonic anhydrase LI62_RS10250 SM00354 helix_turn _helix lactose operon repressor LI62_RS10280 SM00479 LI62_RS10280 LI62_RS10335 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS10340 SM00267 diguanylate cyclase LI62_RS10365 SM00363 S4 RNA-binding domain LI62_RS10385 SM00478 endonuclease III LI62_RS10385 SM00525 LI62_RS10385 LI62_RS10395 SM00900 LI62_RS10395 LI62_RS10455 SM00354 helix_turn _helix lactose operon repressor LI62_RS10485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS10485 SM00387 Histidine kinase-like ATPases LI62_RS10485 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS10495 SM00357 Cold shock protein domain LI62_RS10505 SM00448 cheY-homologous receiver domain LI62_RS10505 SM00862 Transcriptional regulatory protein, C terminal LI62_RS10530 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LI62_RS10530 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LI62_RS10550 SM00100 Cyclic nucleotide-monophosphate binding domain LI62_RS10550 SM00419 helix_turn_helix, cAMP Regulatory protein LI62_RS10580 SM00463 Small MutS-related domain LI62_RS10585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS10585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS10585 SM00319 Homologues of the ligand binding domain of Tar LI62_RS10605 SM00564 beta-propeller repeat LI62_RS10615 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS10650 SM00507 HNH nucleases LI62_RS10720 SM00116 Domain in cystathionine beta-synthase and other proteins. LI62_RS10720 SM00382 ATPases associated with a variety of cellular activities LI62_RS10760 SM01059 Chloramphenicol acetyltransferase LI62_RS10790 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS10825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS10865 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS10865 SM00895 LI62_RS10865 LI62_RS10925 SM00564 beta-propeller repeat LI62_RS10960 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS10970 SM00267 diguanylate cyclase LI62_RS10975 SM00849 Metallo-beta-lactamase superfamily LI62_RS11060 SM00849 Metallo-beta-lactamase superfamily LI62_RS11155 SM00382 ATPases associated with a variety of cellular activities LI62_RS11155 SM00487 DEAD-like helicases superfamily LI62_RS11155 SM00490 helicase superfamily c-terminal domain LI62_RS11155 SM00847 Helicase associated domain (HA2) Add an annotation LI62_RS11200 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS11200 SM01134 LI62_RS11200 LI62_RS11215 SM00382 ATPases associated with a variety of cellular activities LI62_RS11230 SM00052 Putative diguanylate phosphodiesterase LI62_RS11270 SM00829 Enoylreductase LI62_RS11275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS11275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS11275 SM00319 Homologues of the ligand binding domain of Tar LI62_RS11285 SM01150 LI62_RS11285 LI62_RS11305 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS11355 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS11365 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS11385 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS11390 SM00450 Rhodanese Homology Domain LI62_RS11415 SM00382 ATPases associated with a variety of cellular activities LI62_RS11440 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS11445 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS11480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS11480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS11495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS11495 SM00267 diguanylate cyclase LI62_RS11525 SM00382 ATPases associated with a variety of cellular activities LI62_RS11540 SM00448 cheY-homologous receiver domain LI62_RS11540 SM00862 Transcriptional regulatory protein, C terminal LI62_RS11545 SM00387 Histidine kinase-like ATPases LI62_RS11545 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS11565 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS11565 SM01134 LI62_RS11565 LI62_RS11570 SM00710 Parallel beta-helix repeats LI62_RS11665 SM00642 Alpha-amylase domain LI62_RS11670 SM00642 Alpha-amylase domain LI62_RS11675 SM00642 Alpha-amylase domain LI62_RS11690 SM00849 Metallo-beta-lactamase superfamily LI62_RS11745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS11745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS11750 SM00354 helix_turn _helix lactose operon repressor LI62_RS11755 SM00640 Glycosyl hydrolases family 32 LI62_RS11775 SM00052 Putative diguanylate phosphodiesterase LI62_RS11775 SM01034 Sensors of blue-light using FAD LI62_RS11810 SM00382 ATPases associated with a variety of cellular activities LI62_RS11815 SM00382 ATPases associated with a variety of cellular activities LI62_RS11820 SM00822 LI62_RS11820 LI62_RS11840 SM00849 Metallo-beta-lactamase superfamily LI62_RS11860 SM00919 Malic enzyme, NAD binding domain LI62_RS11860 SM01274 LI62_RS11860 LI62_RS11865 SM00382 ATPases associated with a variety of cellular activities LI62_RS11870 SM00829 Enoylreductase LI62_RS11910 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS11940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS11965 SM00903 Flavin reductase like domain LI62_RS11980 SM00838 Elongation factor G C-terminus LI62_RS11980 SM00889 Elongation factor G, domain IV LI62_RS11985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS12010 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS12015 SM00382 ATPases associated with a variety of cellular activities LI62_RS12030 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS12080 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS12080 SM00895 LI62_RS12080 LI62_RS12085 SM00829 Enoylreductase LI62_RS12090 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS12160 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS12195 SM00890 Domain of unknown function LI62_RS12225 SM00487 DEAD-like helicases superfamily LI62_RS12225 SM00490 helicase superfamily c-terminal domain LI62_RS12240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS12350 SM00382 ATPases associated with a variety of cellular activities LI62_RS12350 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS12395 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS12405 SM00091 PAS domain LI62_RS12405 SM00382 ATPases associated with a variety of cellular activities LI62_RS12420 SM00354 helix_turn _helix lactose operon repressor LI62_RS12430 SM00382 ATPases associated with a variety of cellular activities LI62_RS12475 SM00642 Alpha-amylase domain LI62_RS12500 SM00382 ATPases associated with a variety of cellular activities LI62_RS12520 SM00382 ATPases associated with a variety of cellular activities LI62_RS12525 SM00382 ATPases associated with a variety of cellular activities LI62_RS12550 SM00357 Cold shock protein domain LI62_RS12550 SM00955 LI62_RS12550 LI62_RS12555 SM00052 Putative diguanylate phosphodiesterase LI62_RS12555 SM00091 PAS domain LI62_RS12555 SM00267 diguanylate cyclase LI62_RS12570 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS12570 SM01134 LI62_RS12570 LI62_RS12585 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS12590 SM00028 Tetratricopeptide repeats LI62_RS12600 SM00014 Acid phosphatase homologues LI62_RS12635 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LI62_RS12635 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LI62_RS12635 SM00493 LI62_RS12635 LI62_RS12650 SM00822 LI62_RS12650 LI62_RS12660 SM00363 S4 RNA-binding domain LI62_RS12670 SM00481 DNA polymerase alpha chain like domain LI62_RS12760 SM00155 Phospholipase D. Active site motifs. LI62_RS12775 SM00382 ATPases associated with a variety of cellular activities LI62_RS12780 SM00382 ATPases associated with a variety of cellular activities LI62_RS12815 SM00528 Domain in histone-like proteins of HNS family LI62_RS12825 SM00448 cheY-homologous receiver domain LI62_RS12870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS12880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS12880 SM00387 Histidine kinase-like ATPases LI62_RS12885 SM00421 helix_turn_helix, Lux Regulon LI62_RS12885 SM00448 cheY-homologous receiver domain LI62_RS12895 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS12905 SM00382 ATPases associated with a variety of cellular activities LI62_RS12920 SM01012 LI62_RS12920 LI62_RS12930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS12930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS12975 SM00937 LI62_RS12975 LI62_RS12995 SM01400 LI62_RS12995 LI62_RS13005 SM00422 helix_turn_helix, mercury resistance LI62_RS13030 SM00860 SMI1 / KNR4 family LI62_RS13070 SM00248 ankyrin repeats LI62_RS13085 SM00382 ATPases associated with a variety of cellular activities LI62_RS13085 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS13115 SM00331 Sigma factor PP2C-like phosphatases LI62_RS13115 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain LI62_RS13195 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS13200 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS13235 SM01091 Transporter associated domain LI62_RS13240 SM01005 Alanine racemase, C-terminal domain LI62_RS13260 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS13305 SM00341 Helicase and RNase D C-terminal LI62_RS13305 SM00474 3'-5' exonuclease LI62_RS13325 SM00487 DEAD-like helicases superfamily LI62_RS13325 SM00491 LI62_RS13325 LI62_RS13355 SM00052 Putative diguanylate phosphodiesterase LI62_RS13360 SM01091 Transporter associated domain LI62_RS13400 SM00357 Cold shock protein domain LI62_RS13425 SM00346 helix_turn_helix isocitrate lyase regulation LI62_RS13440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI62_RS13440 SM00245 tail specific protease LI62_RS13445 SM00945 ProQ/FINO family LI62_RS13450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS13515 SM00479 LI62_RS13515 LI62_RS13565 SM00257 Lysin motif LI62_RS13575 SM00382 ATPases associated with a variety of cellular activities LI62_RS13585 SM00382 ATPases associated with a variety of cellular activities LI62_RS13590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI62_RS13650 SM00836 DALR anticodon binding domain LI62_RS13650 SM01016 Arginyl tRNA synthetase N terminal dom LI62_RS13685 SM00448 cheY-homologous receiver domain LI62_RS13690 SM00448 cheY-homologous receiver domain LI62_RS13695 SM00138 Methyltransferase, chemotaxis proteins LI62_RS13700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS13700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS13700 SM00319 Homologues of the ligand binding domain of Tar LI62_RS13705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS13705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS13705 SM00319 Homologues of the ligand binding domain of Tar LI62_RS13710 SM00972 Spore Coat Protein U domain LI62_RS13725 SM00972 Spore Coat Protein U domain LI62_RS13730 SM00972 Spore Coat Protein U domain LI62_RS13740 SM00260 Two component signalling adaptor domain LI62_RS13745 SM00073 Histidine Phosphotransfer domain LI62_RS13745 SM00260 Two component signalling adaptor domain LI62_RS13745 SM00387 Histidine kinase-like ATPases LI62_RS13745 SM01231 LI62_RS13745 LI62_RS13790 SM00382 ATPases associated with a variety of cellular activities LI62_RS13870 SM00382 ATPases associated with a variety of cellular activities LI62_RS13875 SM00382 ATPases associated with a variety of cellular activities LI62_RS13920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI62_RS13920 SM00465 GIY-YIG type nucleases (URI domain) LI62_RS13925 SM00421 helix_turn_helix, Lux Regulon LI62_RS13925 SM00448 cheY-homologous receiver domain LI62_RS13935 SM00421 helix_turn_helix, Lux Regulon LI62_RS13940 SM00382 ATPases associated with a variety of cellular activities LI62_RS13955 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS13955 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI62_RS13990 SM00642 Alpha-amylase domain LI62_RS14020 SM00382 ATPases associated with a variety of cellular activities LI62_RS14070 SM00421 helix_turn_helix, Lux Regulon LI62_RS14090 SM00267 diguanylate cyclase LI62_RS14120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS14135 SM00387 Histidine kinase-like ATPases LI62_RS14140 SM00448 cheY-homologous receiver domain LI62_RS14150 SM00900 LI62_RS14150 LI62_RS14205 SM01006 Siderophore biosynthesis protein domain LI62_RS14230 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS14260 SM00831 Cation transporter/ATPase, N-terminus LI62_RS14325 SM00871 Bacterial transcription activator, effector binding domain LI62_RS14330 SM00936 Penicillin-binding protein 5, C-terminal domain LI62_RS14335 SM00479 LI62_RS14335 LI62_RS14405 SM00984 UDP binding domain LI62_RS14410 SM01350 LI62_RS14410 LI62_RS14425 SM00854 Bacterial capsule synthesis protein PGA_cap LI62_RS14575 SM00226 Low molecular weight phosphatase family LI62_RS14585 SM01091 Transporter associated domain LI62_RS14605 SM00052 Putative diguanylate phosphodiesterase LI62_RS14605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LI62_RS14605 SM00091 PAS domain LI62_RS14605 SM00267 diguanylate cyclase LI62_RS14610 SM00478 endonuclease III LI62_RS14610 SM01009 AlkA N-terminal domain LI62_RS14640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS14640 SM00387 Histidine kinase-like ATPases LI62_RS14640 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS14645 SM00448 cheY-homologous receiver domain LI62_RS14645 SM00862 Transcriptional regulatory protein, C terminal LI62_RS14655 SM00046 Diacylglycerol kinase catalytic domain (presumed) LI62_RS14660 SM00382 ATPases associated with a variety of cellular activities LI62_RS14665 SM00382 ATPases associated with a variety of cellular activities LI62_RS14685 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS14715 SM00354 helix_turn _helix lactose operon repressor LI62_RS14735 SM01133 LI62_RS14735 LI62_RS14755 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS14755 SM00866 LI62_RS14755 LI62_RS14860 SM00226 Low molecular weight phosphatase family LI62_RS14895 SM00448 cheY-homologous receiver domain LI62_RS14895 SM00850 LytTr DNA-binding domain LI62_RS14900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS14900 SM00387 Histidine kinase-like ATPases LI62_RS14905 SM00422 helix_turn_helix, mercury resistance LI62_RS14915 SM00382 ATPases associated with a variety of cellular activities LI62_RS14930 SM01217 LI62_RS14930 LI62_RS15000 SM00382 ATPases associated with a variety of cellular activities LI62_RS15010 SM00354 helix_turn _helix lactose operon repressor LI62_RS15055 SM00518 AP endonuclease family 2 LI62_RS15085 SM00841 Elongation factor P, C-terminal LI62_RS15085 SM01185 LI62_RS15085 LI62_RS15100 SM00833 Cobalamin synthesis protein cobW C-terminal domain LI62_RS15105 SM00014 Acid phosphatase homologues LI62_RS15115 SM00052 Putative diguanylate phosphodiesterase LI62_RS15135 SM00382 ATPases associated with a variety of cellular activities LI62_RS15150 SM00363 S4 RNA-binding domain LI62_RS15155 SM00487 DEAD-like helicases superfamily LI62_RS15155 SM00490 helicase superfamily c-terminal domain LI62_RS15205 SM00924 MgtE intracellular N domain LI62_RS15210 SM00382 ATPases associated with a variety of cellular activities LI62_RS15220 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS15235 SM00387 Histidine kinase-like ATPases LI62_RS15240 SM00421 helix_turn_helix, Lux Regulon LI62_RS15240 SM00448 cheY-homologous receiver domain LI62_RS15245 SM00387 Histidine kinase-like ATPases LI62_RS15245 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS15245 SM00448 cheY-homologous receiver domain LI62_RS15250 SM00434 DNA Topoisomerase IV LI62_RS15300 SM00852 Probable molybdopterin binding domain LI62_RS15310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS15310 SM00387 Histidine kinase-like ATPases LI62_RS15310 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS15315 SM00448 cheY-homologous receiver domain LI62_RS15315 SM00862 Transcriptional regulatory protein, C terminal LI62_RS15340 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS15375 SM00849 Metallo-beta-lactamase superfamily LI62_RS15380 SM00260 Two component signalling adaptor domain LI62_RS15380 SM00448 cheY-homologous receiver domain LI62_RS15420 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS15420 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI62_RS15425 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI62_RS15460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS15495 SM00861 Transketolase, pyrimidine binding domain LI62_RS15520 SM00354 helix_turn _helix lactose operon repressor LI62_RS15545 SM00905 Dihydroneopterin aldolase LI62_RS15560 SM00382 ATPases associated with a variety of cellular activities LI62_RS15575 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS15580 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS15625 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI62_RS15645 SM00825 Beta-ketoacyl synthase LI62_RS15685 SM00463 Small MutS-related domain LI62_RS15750 SM00387 Histidine kinase-like ATPases LI62_RS15755 SM00448 cheY-homologous receiver domain LI62_RS15755 SM00850 LytTr DNA-binding domain LI62_RS15795 SM00052 Putative diguanylate phosphodiesterase LI62_RS15795 SM00267 diguanylate cyclase LI62_RS15865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI62_RS15865 SM00292 breast cancer carboxy-terminal domain LI62_RS15865 SM00532 Ligase N family LI62_RS15870 SM00771 ZipA, C-terminal domain (FtsZ-binding) LI62_RS15910 SM00382 ATPases associated with a variety of cellular activities LI62_RS15950 SM00646 LI62_RS15950 LI62_RS15960 SM00919 Malic enzyme, NAD binding domain LI62_RS15960 SM01274 LI62_RS15960 LI62_RS15970 SM00861 Transketolase, pyrimidine binding domain LI62_RS15980 SM00354 helix_turn _helix lactose operon repressor LI62_RS15985 SM01038 Beta galactosidase small chain LI62_RS16030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS16030 SM00387 Histidine kinase-like ATPases LI62_RS16080 SM01130 LI62_RS16080 LI62_RS16170 SM00052 Putative diguanylate phosphodiesterase LI62_RS16170 SM00267 diguanylate cyclase LI62_RS16190 SM00448 cheY-homologous receiver domain LI62_RS16190 SM00862 Transcriptional regulatory protein, C terminal LI62_RS16195 SM00387 Histidine kinase-like ATPases LI62_RS16195 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS16215 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS16420 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS16470 SM00116 Domain in cystathionine beta-synthase and other proteins. LI62_RS16470 SM01240 LI62_RS16470 LI62_RS16510 SM00564 beta-propeller repeat LI62_RS16530 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS16540 SM00562 LI62_RS16540 LI62_RS16560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS16570 SM01359 LI62_RS16570 LI62_RS16570 SM01360 LI62_RS16570 LI62_RS16585 SM00450 Rhodanese Homology Domain LI62_RS16620 SM00271 DnaJ molecular chaperone homology domain LI62_RS16695 SM00938 Nitrogen regulatory protein P-II LI62_RS16700 SM00382 ATPases associated with a variety of cellular activities LI62_RS16700 SM00448 cheY-homologous receiver domain LI62_RS16710 SM00387 Histidine kinase-like ATPases LI62_RS16710 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS16715 SM01211 LI62_RS16715 LI62_RS16720 SM00062 Bacterial periplasmic substrate-binding proteins LI62_RS16775 SM00358 Double-stranded RNA binding motif LI62_RS16775 SM00535 Ribonuclease III family LI62_RS16820 SM00487 DEAD-like helicases superfamily LI62_RS16820 SM00490 helicase superfamily c-terminal domain LI62_RS16830 SM00986 Uracil DNA glycosylase superfamily LI62_RS16830 SM00987 UreE urease accessory protein, C-terminal domain LI62_RS16835 SM00967 RNA 2'-O ribose methyltransferase substrate binding LI62_RS16845 SM01144 LI62_RS16845 LI62_RS16850 SM00881 CoA binding domain LI62_RS16855 SM00155 Phospholipase D. Active site motifs. LI62_RS16895 SM00382 ATPases associated with a variety of cellular activities LI62_RS16895 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS16905 SM00363 S4 RNA-binding domain LI62_RS16920 SM00830 Chorismate mutase type II LI62_RS16930 SM00830 Chorismate mutase type II LI62_RS16950 SM00267 diguanylate cyclase LI62_RS16990 SM00382 ATPases associated with a variety of cellular activities LI62_RS16990 SM00962 SRP54-type protein, GTPase domain LI62_RS16990 SM00963 SRP54-type protein, helical bundle domain LI62_RS17000 SM01091 Transporter associated domain LI62_RS17045 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS17070 SM00382 ATPases associated with a variety of cellular activities LI62_RS17075 SM00260 Two component signalling adaptor domain LI62_RS17080 SM00073 Histidine Phosphotransfer domain LI62_RS17080 SM00260 Two component signalling adaptor domain LI62_RS17080 SM00387 Histidine kinase-like ATPases LI62_RS17080 SM01231 LI62_RS17080 LI62_RS17110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS17110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS17125 SM00047 Lysozyme subfamily 2 LI62_RS17170 SM00858 LI62_RS17170 LI62_RS17260 SM00382 ATPases associated with a variety of cellular activities LI62_RS17285 SM00138 Methyltransferase, chemotaxis proteins LI62_RS17290 SM00448 cheY-homologous receiver domain LI62_RS17295 SM00448 cheY-homologous receiver domain LI62_RS17340 SM00354 helix_turn _helix lactose operon repressor LI62_RS17385 SM00382 ATPases associated with a variety of cellular activities LI62_RS17400 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS17445 SM00248 ankyrin repeats LI62_RS17465 SM00528 Domain in histone-like proteins of HNS family LI62_RS17505 SM00382 ATPases associated with a variety of cellular activities LI62_RS17525 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS17540 SM00917 LeuA allosteric (dimerisation) domain LI62_RS17545 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS17600 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LI62_RS17610 SM00382 ATPases associated with a variety of cellular activities LI62_RS17630 SM00382 ATPases associated with a variety of cellular activities LI62_RS17665 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS17665 SM01134 LI62_RS17665 LI62_RS17675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS17675 SM00382 ATPases associated with a variety of cellular activities LI62_RS17680 SM00849 Metallo-beta-lactamase superfamily LI62_RS17705 SM00354 helix_turn _helix lactose operon repressor LI62_RS17790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS17790 SM00382 ATPases associated with a variety of cellular activities LI62_RS17805 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LI62_RS17805 SM00534 ATPase domain of DNA mismatch repair MUTS family LI62_RS17825 SM00347 helix_turn_helix multiple antibiotic resistance protein LI62_RS17850 SM00257 Lysin motif LI62_RS17935 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS17970 SM01192 LI62_RS17970 LI62_RS17970 SM01193 LI62_RS17970 LI62_RS17985 SM00954 Region found in RelA / SpoT proteins LI62_RS17995 SM00073 Histidine Phosphotransfer domain LI62_RS17995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS17995 SM00387 Histidine kinase-like ATPases LI62_RS17995 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS17995 SM00448 cheY-homologous receiver domain LI62_RS18005 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS18010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI62_RS18065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LI62_RS18065 SM00475 5'-3' exonuclease LI62_RS18105 SM00925 MltA specific insert domain LI62_RS18125 SM00646 LI62_RS18125 LI62_RS18185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI62_RS18195 SM00927 DNA mismatch repair enzyme MutH LI62_RS18215 SM00563 Phosphate acyltransferases LI62_RS18220 SM00354 helix_turn _helix lactose operon repressor LI62_RS18230 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS18230 SM00895 LI62_RS18230 LI62_RS18245 SM00354 helix_turn _helix lactose operon repressor LI62_RS18285 SM00382 ATPases associated with a variety of cellular activities LI62_RS18380 SM00642 Alpha-amylase domain LI62_RS18385 SM00822 LI62_RS18385 LI62_RS18415 SM00849 Metallo-beta-lactamase superfamily LI62_RS18460 SM00257 Lysin motif LI62_RS18475 SM00937 LI62_RS18475 LI62_RS18585 SM01011 Aminopeptidase P, N-terminal domain LI62_RS18650 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI62_RS18655 SM00861 Transketolase, pyrimidine binding domain LI62_RS18715 SM00346 helix_turn_helix isocitrate lyase regulation LI62_RS18770 SM00731 SprT homologues. LI62_RS18795 SM00732 Likely ribonuclease with RNase H fold. LI62_RS18815 SM01152 LI62_RS18815 LI62_RS18825 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS18850 SM00478 endonuclease III LI62_RS18850 SM00525 LI62_RS18850 LI62_RS18895 SM00764 Citrate lyase ligase C-terminal domain LI62_RS18910 SM00091 PAS domain LI62_RS18910 SM00387 Histidine kinase-like ATPases LI62_RS18915 SM00448 cheY-homologous receiver domain LI62_RS18980 SM00382 ATPases associated with a variety of cellular activities LI62_RS18995 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS19015 SM00857 Resolvase, N terminal domain LI62_RS19080 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS19115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS19130 SM00422 helix_turn_helix, mercury resistance LI62_RS19135 SM00422 helix_turn_helix, mercury resistance LI62_RS19155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS19195 SM00382 ATPases associated with a variety of cellular activities LI62_RS19365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LI62_RS19365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LI62_RS19365 SM00493 LI62_RS19365 LI62_RS19405 SM00382 ATPases associated with a variety of cellular activities LI62_RS19415 SM00387 Histidine kinase-like ATPases LI62_RS19415 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS19415 SM00448 cheY-homologous receiver domain LI62_RS19420 SM00421 helix_turn_helix, Lux Regulon LI62_RS19420 SM00448 cheY-homologous receiver domain LI62_RS19430 SM00869 Autotransporter beta-domain LI62_RS19470 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS19470 SM01134 LI62_RS19470 LI62_RS19475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS19475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS19525 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS19555 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS19565 SM00829 Enoylreductase LI62_RS19585 SM00829 Enoylreductase LI62_RS19640 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS19650 SM00849 Metallo-beta-lactamase superfamily LI62_RS19665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI62_RS19715 SM00563 Phosphate acyltransferases LI62_RS19720 SM00434 DNA Topoisomerase IV LI62_RS19730 SM00448 cheY-homologous receiver domain LI62_RS19730 SM00862 Transcriptional regulatory protein, C terminal LI62_RS19735 SM00387 Histidine kinase-like ATPases LI62_RS19735 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS19750 SM00257 Lysin motif LI62_RS19750 SM00749 bacterial OsmY and nodulation domain LI62_RS19770 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS19795 SM00382 ATPases associated with a variety of cellular activities LI62_RS19805 SM00387 Histidine kinase-like ATPases LI62_RS19805 SM00433 TopoisomeraseII LI62_RS19895 SM01118 LI62_RS19895 LI62_RS19900 SM00287 Bacterial SH3 domain homologues LI62_RS19905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI62_RS19915 SM00905 Dihydroneopterin aldolase LI62_RS19920 SM01207 LI62_RS19920 LI62_RS19950 SM00988 UreE urease accessory protein, N-terminal domain LI62_RS19980 SM00400 zinc finger LI62_RS19980 SM00493 LI62_RS19980 LI62_RS19980 SM00766 DNA primase DnaG DnaB-binding LI62_RS19990 SM00986 Uracil DNA glycosylase superfamily LI62_RS19990 SM00987 UreE urease accessory protein, C-terminal domain LI62_RS20015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS20015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS20020 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LI62_RS20020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI62_RS20070 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS20075 SM00873 B3/4 domain LI62_RS20085 SM01133 LI62_RS20085 LI62_RS20105 SM00382 ATPases associated with a variety of cellular activities LI62_RS20150 SM00858 LI62_RS20150 LI62_RS20165 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS20165 SM00895 LI62_RS20165 LI62_RS20275 SM00858 LI62_RS20275 LI62_RS20280 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS20280 SM01134 LI62_RS20280 LI62_RS20365 SM00749 bacterial OsmY and nodulation domain LI62_RS20425 SM00487 DEAD-like helicases superfamily LI62_RS20425 SM00490 helicase superfamily c-terminal domain LI62_RS20430 SM00028 Tetratricopeptide repeats LI62_RS20435 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS20435 SM00322 K homology RNA-binding domain LI62_RS20440 SM01387 LI62_RS20440 LI62_RS20460 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS20500 SM00382 ATPases associated with a variety of cellular activities LI62_RS20510 SM01103 LI62_RS20510 LI62_RS20525 SM00448 cheY-homologous receiver domain LI62_RS20525 SM00862 Transcriptional regulatory protein, C terminal LI62_RS20530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS20530 SM00387 Histidine kinase-like ATPases LI62_RS20530 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS20595 SM00382 ATPases associated with a variety of cellular activities LI62_RS20625 SM00382 ATPases associated with a variety of cellular activities LI62_RS20665 SM00073 Histidine Phosphotransfer domain LI62_RS20665 SM00091 PAS domain LI62_RS20665 SM00387 Histidine kinase-like ATPases LI62_RS20665 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS20665 SM00448 cheY-homologous receiver domain LI62_RS20700 SM00829 Enoylreductase LI62_RS20705 SM01120 LI62_RS20705 LI62_RS20715 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS20755 SM01130 LI62_RS20755 LI62_RS20760 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS20760 SM00895 LI62_RS20760 LI62_RS20795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI62_RS20800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI62_RS20860 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS20885 SM00052 Putative diguanylate phosphodiesterase LI62_RS20885 SM00267 diguanylate cyclase LI62_RS20890 SM00829 Enoylreductase LI62_RS20915 SM00878 Biotin carboxylase C-terminal domain LI62_RS20935 SM01057 Eukaryotic-type carbonic anhydrase LI62_RS20955 SM00052 Putative diguanylate phosphodiesterase LI62_RS20955 SM00267 diguanylate cyclase LI62_RS21075 SM00422 helix_turn_helix, mercury resistance LI62_RS21090 SM00662 RNA polymerases D LI62_RS21095 SM00363 S4 RNA-binding domain LI62_RS21095 SM01390 LI62_RS21095 LI62_RS21160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LI62_RS21165 SM01374 LI62_RS21165 LI62_RS21185 SM00322 K homology RNA-binding domain LI62_RS21200 SM01382 LI62_RS21200 LI62_RS21200 SM01383 LI62_RS21200 LI62_RS21220 SM01403 LI62_RS21220 LI62_RS21245 SM00838 Elongation factor G C-terminus LI62_RS21245 SM00889 Elongation factor G, domain IV LI62_RS21310 SM00382 ATPases associated with a variety of cellular activities LI62_RS21320 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LI62_RS21385 SM00100 Cyclic nucleotide-monophosphate binding domain LI62_RS21385 SM00419 helix_turn_helix, cAMP Regulatory protein LI62_RS21480 SM00965 Secretin and TonB N terminus short domain LI62_RS21530 SM00363 S4 RNA-binding domain LI62_RS21550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS21550 SM00387 Histidine kinase-like ATPases LI62_RS21550 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS21555 SM00448 cheY-homologous receiver domain LI62_RS21555 SM00862 Transcriptional regulatory protein, C terminal LI62_RS21565 SM00316 Ribosomal protein S1-like RNA-binding domain LI62_RS21565 SM00732 Likely ribonuclease with RNase H fold. LI62_RS21570 SM00899 LI62_RS21570 LI62_RS21615 SM00421 helix_turn_helix, Lux Regulon LI62_RS21620 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS21620 SM01134 LI62_RS21620 LI62_RS21630 SM00450 Rhodanese Homology Domain LI62_RS21660 SM00642 Alpha-amylase domain LI62_RS21665 SM00642 Alpha-amylase domain LI62_RS21670 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI62_RS21695 SM00354 helix_turn _helix lactose operon repressor LI62_RS21730 SM00382 ATPases associated with a variety of cellular activities LI62_RS21750 SM00382 ATPases associated with a variety of cellular activities LI62_RS21755 SM00382 ATPases associated with a variety of cellular activities LI62_RS21810 SM00382 ATPases associated with a variety of cellular activities LI62_RS21815 SM00382 ATPases associated with a variety of cellular activities LI62_RS21815 SM00962 SRP54-type protein, GTPase domain LI62_RS21815 SM00963 SRP54-type protein, helical bundle domain LI62_RS21885 SM00563 Phosphate acyltransferases LI62_RS21940 SM00825 Beta-ketoacyl synthase LI62_RS21950 SM00822 LI62_RS21950 LI62_RS21955 SM00825 Beta-ketoacyl synthase LI62_RS22035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS22035 SM00387 Histidine kinase-like ATPases LI62_RS22035 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS22040 SM00448 cheY-homologous receiver domain LI62_RS22040 SM00862 Transcriptional regulatory protein, C terminal LI62_RS22080 SM00746 metallochaperone-like domain LI62_RS22115 SM00448 cheY-homologous receiver domain LI62_RS22115 SM00862 Transcriptional regulatory protein, C terminal LI62_RS22120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS22120 SM00387 Histidine kinase-like ATPases LI62_RS22120 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS22145 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS22160 SM00382 ATPases associated with a variety of cellular activities LI62_RS22240 SM00421 helix_turn_helix, Lux Regulon LI62_RS22245 SM00822 LI62_RS22245 LI62_RS22270 SM00052 Putative diguanylate phosphodiesterase LI62_RS22290 SM00052 Putative diguanylate phosphodiesterase LI62_RS22290 SM00267 diguanylate cyclase LI62_RS22295 SM00028 Tetratricopeptide repeats LI62_RS22440 SM00382 ATPases associated with a variety of cellular activities LI62_RS22450 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS22455 SM00047 Lysozyme subfamily 2 LI62_RS22460 SM00642 Alpha-amylase domain LI62_RS22475 SM00346 helix_turn_helix isocitrate lyase regulation LI62_RS22505 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI62_RS22515 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS22520 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS22610 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS22610 SM00895 LI62_RS22610 LI62_RS22665 SM00382 ATPases associated with a variety of cellular activities LI62_RS22760 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI62_RS22815 SM00487 DEAD-like helicases superfamily LI62_RS22815 SM00490 helicase superfamily c-terminal domain LI62_RS22820 SM00354 helix_turn _helix lactose operon repressor LI62_RS22835 SM00382 ATPases associated with a variety of cellular activities LI62_RS22835 SM01086 C-terminal, D2-small domain, of ClpB protein LI62_RS22940 SM00382 ATPases associated with a variety of cellular activities LI62_RS22955 SM00448 cheY-homologous receiver domain LI62_RS22955 SM00862 Transcriptional regulatory protein, C terminal LI62_RS22960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI62_RS22960 SM00387 Histidine kinase-like ATPases LI62_RS22960 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS22980 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS22985 SM00342 helix_turn_helix, arabinose operon control protein LI62_RS23005 SM01007 Class II Aldolase and Adducin N-terminal domain LI62_RS23015 SM00382 ATPases associated with a variety of cellular activities LI62_RS23050 SM00354 helix_turn _helix lactose operon repressor LI62_RS23055 SM00530 Helix-turn-helix XRE-family like proteins LI62_RS23100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI62_RS23160 SM00420 helix_turn_helix, Deoxyribose operon repressor LI62_RS23160 SM01134 LI62_RS23160 LI62_RS23175 SM01133 LI62_RS23175 LI62_RS23210 SM01230 LI62_RS23210 LI62_RS23215 SM00091 PAS domain LI62_RS23215 SM00387 Histidine kinase-like ATPases LI62_RS23215 SM00388 His Kinase A (phosphoacceptor) domain LI62_RS23220 SM00382 ATPases associated with a variety of cellular activities LI62_RS23220 SM00448 cheY-homologous receiver domain LI62_RS23230 SM00729 Elongator protein 3, MiaB family, Radical SAM LI62_RS23245 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LI62_RS23245 SM00474 3'-5' exonuclease LI62_RS23245 SM00475 5'-3' exonuclease LI62_RS23245 SM00482 DNA polymerase A domain LI62_RS23250 SM00563 Phosphate acyltransferases LI62_RS23300 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI62_RS23300 SM00895 LI62_RS23300 LI62_RS23310 SM00354 helix_turn _helix lactose operon repressor LI62_RS23330 SM00382 ATPases associated with a variety of cellular activities LI62_RS23345 SM00382 ATPases associated with a variety of cellular activities LI62_RS23350 SM00327 von Willebrand factor (vWF) type A domain LI62_RS23360 SM00344 helix_turn_helix ASNC type LI62_RS23370 SM01228 LI62_RS23370 LI62_RS23415 SM00382 ATPases associated with a variety of cellular activities LI62_RS23470 SM00382 ATPases associated with a variety of cellular activities