CCL06_RS00005	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CCL06_RS00010	SM00480	DNA polymerase III beta subunit
CCL06_RS00020	SM00387	Histidine kinase-like ATPases
CCL06_RS00020	SM00433	TopoisomeraseII
CCL06_RS00030	SM00829	Enoylreductase
CCL06_RS00040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS00040	SM00895	CCL06_RS00040
CCL06_RS00055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS00090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS00090	SM00866	CCL06_RS00090
CCL06_RS00160	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS00180	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS00180	SM00448	cheY-homologous receiver domain
CCL06_RS00185	SM00387	Histidine kinase-like ATPases
CCL06_RS00250	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS00290	SM00095	Transthyretin
CCL06_RS00295	SM00422	helix_turn_helix, mercury resistance
CCL06_RS00315	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS00355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCL06_RS00355	SM00954	Region found in RelA / SpoT proteins
CCL06_RS00360	SM01409	CCL06_RS00360
CCL06_RS00365	SM00072	Guanylate kinase homologues.
CCL06_RS00370	SM00532	Ligase N family
CCL06_RS00465	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CCL06_RS00465	SM01232	CCL06_RS00465
CCL06_RS00540	SM00829	Enoylreductase
CCL06_RS00565	SM00450	Rhodanese Homology Domain
CCL06_RS00585	SM00971	Serine acetyltransferase, N-terminal
CCL06_RS00605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS00605	SM00895	CCL06_RS00605
CCL06_RS00695	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS00700	SM01007	Class II Aldolase and Adducin N-terminal domain
CCL06_RS00710	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CCL06_RS00740	SM00346	helix_turn_helix isocitrate lyase regulation
CCL06_RS00750	SM00642	Alpha-amylase domain
CCL06_RS00760	SM00047	Lysozyme subfamily 2
CCL06_RS00765	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS00775	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS00805	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS00835	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS00840	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS00850	SM00357	Cold shock protein domain
CCL06_RS00875	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS00995	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01000	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01040	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CCL06_RS01040	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCL06_RS01045	SM00649	Ribosomal protein L11/L12
CCL06_RS01075	SM00663	RNA polymerase I subunit A N-terminus
CCL06_RS01090	SM00267	diguanylate cyclase
CCL06_RS01095	SM00876	Biotin and Thiamin Synthesis associated domain
CCL06_RS01150	SM00411	bacterial (prokaryotic) histone like domain
CCL06_RS01160	SM01209	CCL06_RS01160
CCL06_RS01160	SM01210	CCL06_RS01160
CCL06_RS01165	SM00798	AICARFT/IMPCHase bienzyme
CCL06_RS01165	SM00851	MGS-like domain
CCL06_RS01215	SM00346	helix_turn_helix isocitrate lyase regulation
CCL06_RS01220	SM01018	B12 binding domain
CCL06_RS01240	SM00363	S4 RNA-binding domain
CCL06_RS01300	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01370	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01370	SM00962	SRP54-type protein, GTPase domain
CCL06_RS01370	SM00963	SRP54-type protein, helical bundle domain
CCL06_RS01375	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01425	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01430	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01450	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01485	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS01500	SM00563	Phosphate acyltransferases
CCL06_RS01550	SM00829	Enoylreductase
CCL06_RS01555	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01560	SM01005	Alanine racemase, C-terminal domain
CCL06_RS01600	SM00267	diguanylate cyclase
CCL06_RS01605	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS01610	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS01615	SM00422	helix_turn_helix, mercury resistance
CCL06_RS01675	SM00671	Sel1-like repeats.
CCL06_RS01690	SM00448	cheY-homologous receiver domain
CCL06_RS01690	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS01720	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS01725	SM00387	Histidine kinase-like ATPases
CCL06_RS01725	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS01725	SM00448	cheY-homologous receiver domain
CCL06_RS01745	SM00072	Guanylate kinase homologues.
CCL06_RS01755	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01760	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS01785	SM00866	CCL06_RS01785
CCL06_RS01800	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01875	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS01915	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCL06_RS01915	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCL06_RS01915	SM00493	CCL06_RS01915
CCL06_RS02165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS02165	SM00387	Histidine kinase-like ATPases
CCL06_RS02165	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS02195	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS02230	SM00857	Resolvase, N terminal domain
CCL06_RS02240	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS02255	SM00857	Resolvase, N terminal domain
CCL06_RS02290	SM00028	Tetratricopeptide repeats
CCL06_RS02325	SM00857	Resolvase, N terminal domain
CCL06_RS02350	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCL06_RS02350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS02385	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS02410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS02415	SM00450	Rhodanese Homology Domain
CCL06_RS02435	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS02450	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS02540	SM00883	Chaperonin 10 Kd subunit
CCL06_RS02560	SM00841	Elongation factor P, C-terminal
CCL06_RS02560	SM01185	CCL06_RS02560
CCL06_RS02575	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS02640	SM00479	CCL06_RS02640
CCL06_RS02675	SM00646	CCL06_RS02675
CCL06_RS02680	SM00853	MutL C terminal dimerisation domain
CCL06_RS02680	SM01340	CCL06_RS02680
CCL06_RS02700	SM00244	prohibitin homologues
CCL06_RS02705	SM00244	prohibitin homologues
CCL06_RS02715	SM00788	Adenylosuccinate synthetase
CCL06_RS02725	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS02725	SM00357	Cold shock protein domain
CCL06_RS02725	SM00955	CCL06_RS02725
CCL06_RS02730	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCL06_RS02745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS02745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS02765	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS02765	SM01134	CCL06_RS02765
CCL06_RS02790	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CCL06_RS02800	SM01007	Class II Aldolase and Adducin N-terminal domain
CCL06_RS02850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS02850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS02850	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS02860	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS02895	SM01091	Transporter associated domain
CCL06_RS02935	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS02980	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS02995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS02995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS03105	SM00642	Alpha-amylase domain
CCL06_RS03115	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS03120	SM00831	Cation transporter/ATPase, N-terminus
CCL06_RS03180	SM01130	CCL06_RS03180
CCL06_RS03200	SM00346	helix_turn_helix isocitrate lyase regulation
CCL06_RS03250	SM00487	DEAD-like helicases superfamily
CCL06_RS03255	SM00487	DEAD-like helicases superfamily
CCL06_RS03255	SM00490	helicase superfamily c-terminal domain
CCL06_RS03275	SM00487	DEAD-like helicases superfamily
CCL06_RS03275	SM00490	helicase superfamily c-terminal domain
CCL06_RS03325	SM00422	helix_turn_helix, mercury resistance
CCL06_RS03355	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS03375	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS03375	SM01134	CCL06_RS03375
CCL06_RS03385	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CCL06_RS03390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS03400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS03425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS03430	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS03470	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS03490	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CCL06_RS03510	SM00903	Flavin reductase like domain
CCL06_RS03520	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS03560	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS03565	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS03565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS03565	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS03585	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS03600	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS03620	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS03625	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS03645	SM00267	diguanylate cyclase
CCL06_RS03695	SM00749	bacterial OsmY and nodulation domain
CCL06_RS03725	SM01133	CCL06_RS03725
CCL06_RS03730	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CCL06_RS03760	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS03765	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS03770	SM00829	Enoylreductase
CCL06_RS03785	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS03810	SM00855	Phosphoglycerate mutase family
CCL06_RS03815	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS03815	SM00871	Bacterial transcription activator, effector binding domain
CCL06_RS03825	SM00448	cheY-homologous receiver domain
CCL06_RS03825	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS03830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS03830	SM00387	Histidine kinase-like ATPases
CCL06_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS03840	SM00448	cheY-homologous receiver domain
CCL06_RS03840	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS03895	SM00852	Probable molybdopterin binding domain
CCL06_RS03915	SM00271	DnaJ molecular chaperone homology domain
CCL06_RS03940	SM00904	Riboflavin kinase
CCL06_RS03970	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CCL06_RS03975	SM00851	MGS-like domain
CCL06_RS03975	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CCL06_RS03985	SM00869	Autotransporter beta-domain
CCL06_RS04020	SM00650	Ribosomal RNA adenine dimethylases
CCL06_RS04040	SM00271	DnaJ molecular chaperone homology domain
CCL06_RS04050	SM00487	DEAD-like helicases superfamily
CCL06_RS04050	SM00490	helicase superfamily c-terminal domain
CCL06_RS04055	SM00486	DNA polymerase type-B family
CCL06_RS04060	SM01007	Class II Aldolase and Adducin N-terminal domain
CCL06_RS04075	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS04085	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04125	SM01329	CCL06_RS04125
CCL06_RS04130	SM00917	LeuA allosteric (dimerisation) domain
CCL06_RS04150	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS04220	SM00842	Cell division protein FtsA
CCL06_RS04225	SM00864	Tubulin/FtsZ family, GTPase domain
CCL06_RS04225	SM00865	Tubulin/FtsZ family, C-terminal domain
CCL06_RS04240	SM00957	SecA DEAD-like domain
CCL06_RS04240	SM00958	SecA preprotein cross-linking domain
CCL06_RS04265	SM01240	CCL06_RS04265
CCL06_RS04290	SM00644	CCL06_RS04290
CCL06_RS04320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS04320	SM00895	CCL06_RS04320
CCL06_RS04385	SM00564	beta-propeller repeat
CCL06_RS04395	SM00947	Carbonic anhydrase
CCL06_RS04400	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04490	SM00487	DEAD-like helicases superfamily
CCL06_RS04490	SM00490	helicase superfamily c-terminal domain
CCL06_RS04490	SM00847	Helicase associated domain (HA2)  Add an annotation
CCL06_RS04510	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04555	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCL06_RS04560	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCL06_RS04580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCL06_RS04625	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCL06_RS04635	SM00935	Outer membrane protein (OmpH-like)
CCL06_RS04665	SM00481	DNA polymerase alpha chain like domain
CCL06_RS04685	SM00977	TilS substrate C-terminal domain
CCL06_RS04700	SM01322	CCL06_RS04700
CCL06_RS04740	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04740	SM00930	CCL06_RS04740
CCL06_RS04810	SM00257	Lysin motif
CCL06_RS04815	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS04830	SM00479	CCL06_RS04830
CCL06_RS04850	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS04860	SM00226	Low molecular weight phosphatase family
CCL06_RS04870	SM00912	haemagglutination activity domain
CCL06_RS04885	SM00822	CCL06_RS04885
CCL06_RS04905	SM00825	Beta-ketoacyl synthase
CCL06_RS04920	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04945	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CCL06_RS04965	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS04980	SM00895	CCL06_RS04980
CCL06_RS04985	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS04990	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05050	SM00900	CCL06_RS05050
CCL06_RS05105	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CCL06_RS05140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS05205	SM01059	Chloramphenicol acetyltransferase
CCL06_RS05210	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS05210	SM00267	diguanylate cyclase
CCL06_RS05225	SM01060	CCL06_RS05225
CCL06_RS05245	SM00267	diguanylate cyclase
CCL06_RS05245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS05265	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS05270	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05285	SM00563	Phosphate acyltransferases
CCL06_RS05290	SM01004	Delta-aminolevulinic acid dehydratase
CCL06_RS05295	SM00869	Autotransporter beta-domain
CCL06_RS05355	SM00098	Alkaline phosphatase homologues
CCL06_RS05365	SM00267	diguanylate cyclase
CCL06_RS05420	SM00448	cheY-homologous receiver domain
CCL06_RS05420	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS05425	SM00091	PAS domain
CCL06_RS05425	SM00387	Histidine kinase-like ATPases
CCL06_RS05425	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS05440	SM00642	Alpha-amylase domain
CCL06_RS05475	SM01323	CCL06_RS05475
CCL06_RS05540	SM00861	Transketolase, pyrimidine binding domain
CCL06_RS05555	SM00981	CCL06_RS05555
CCL06_RS05635	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05635	SM00994	ClpX C4-type zinc finger
CCL06_RS05635	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS05640	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05640	SM00464	Found in ATP-dependent protease La (LON)
CCL06_RS05645	SM00411	bacterial (prokaryotic) histone like domain
CCL06_RS05655	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCL06_RS05695	SM00344	helix_turn_helix ASNC type
CCL06_RS05700	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05705	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05710	SM00938	Nitrogen regulatory protein P-II
CCL06_RS05760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS05770	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS05775	SM01038	Beta galactosidase small chain
CCL06_RS05790	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS05810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS05820	SM01266	CCL06_RS05820
CCL06_RS05875	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05885	SM00493	CCL06_RS05885
CCL06_RS05890	SM00387	Histidine kinase-like ATPases
CCL06_RS05945	SM00422	helix_turn_helix, mercury resistance
CCL06_RS05955	SM00244	prohibitin homologues
CCL06_RS05960	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS05975	SM00822	CCL06_RS05975
CCL06_RS05985	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06000	SM00450	Rhodanese Homology Domain
CCL06_RS06010	SM01001	AIR carboxylase
CCL06_RS06030	SM00840	CCL06_RS06030
CCL06_RS06040	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS06090	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS06090	SM00448	cheY-homologous receiver domain
CCL06_RS06100	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS06220	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS06320	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06450	SM00843	CCL06_RS06450
CCL06_RS06535	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06560	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS06585	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS06600	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS06610	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS06630	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS06635	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS06715	SM00860	SMI1 / KNR4 family
CCL06_RS06735	SM00860	SMI1 / KNR4 family
CCL06_RS06785	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06795	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS06795	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS06840	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06845	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06900	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS06925	SM00923	MbtH-like protein
CCL06_RS06930	SM00824	Thioesterase
CCL06_RS06935	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS06975	SM00822	CCL06_RS06975
CCL06_RS07015	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS07025	SM00822	CCL06_RS07025
CCL06_RS07035	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07080	SM01007	Class II Aldolase and Adducin N-terminal domain
CCL06_RS07090	SM00470	ParB-like nuclease domain
CCL06_RS07130	SM00903	Flavin reductase like domain
CCL06_RS07150	SM00357	Cold shock protein domain
CCL06_RS07170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS07190	SM00936	Penicillin-binding protein 5, C-terminal domain 
CCL06_RS07255	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07270	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS07280	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCL06_RS07280	SM01091	Transporter associated domain
CCL06_RS07295	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS07430	SM00448	cheY-homologous receiver domain
CCL06_RS07430	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS07435	SM00387	Histidine kinase-like ATPases
CCL06_RS07435	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS07475	SM00796	Allophanate hydrolase subunit 1
CCL06_RS07480	SM00797	Allophanate hydrolase subunit 2
CCL06_RS07490	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CCL06_RS07490	SM01232	CCL06_RS07490
CCL06_RS07525	SM00861	Transketolase, pyrimidine binding domain
CCL06_RS07540	SM00881	CoA binding domain
CCL06_RS07650	SM00855	Phosphoglycerate mutase family
CCL06_RS07675	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07700	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS07735	SM00866	CCL06_RS07735
CCL06_RS07760	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS07760	SM00876	Biotin and Thiamin Synthesis associated domain
CCL06_RS07780	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07785	SM00487	DEAD-like helicases superfamily
CCL06_RS07785	SM00490	helicase superfamily c-terminal domain
CCL06_RS07800	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS07805	SM00852	Probable molybdopterin binding domain
CCL06_RS07835	SM00155	Phospholipase D. Active site motifs.
CCL06_RS07860	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07875	SM00487	DEAD-like helicases superfamily
CCL06_RS07875	SM00490	helicase superfamily c-terminal domain
CCL06_RS07880	SM00487	DEAD-like helicases superfamily
CCL06_RS07880	SM00488	CCL06_RS07880
CCL06_RS07880	SM00491	CCL06_RS07880
CCL06_RS07940	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS07950	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS07950	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS07985	SM00529	Helix-turn-helix diphteria tox regulatory element
CCL06_RS08025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS08025	SM00866	CCL06_RS08025
CCL06_RS08035	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08050	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS08095	SM00852	Probable molybdopterin binding domain
CCL06_RS08105	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS08145	SM00936	Penicillin-binding protein 5, C-terminal domain 
CCL06_RS08150	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS08150	SM01134	CCL06_RS08150
CCL06_RS08155	SM00014	Acid phosphatase homologues
CCL06_RS08195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS08240	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08265	SM00448	cheY-homologous receiver domain
CCL06_RS08265	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS08270	SM00387	Histidine kinase-like ATPases
CCL06_RS08270	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS08275	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS08275	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS08290	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS08290	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS08295	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08310	SM00644	CCL06_RS08310
CCL06_RS08340	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08390	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CCL06_RS08390	SM00495	Chitin-binding domain type 3
CCL06_RS08390	SM00636	CCL06_RS08390
CCL06_RS08400	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CCL06_RS08400	SM00495	Chitin-binding domain type 3
CCL06_RS08465	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08470	SM00357	Cold shock protein domain
CCL06_RS08480	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08480	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS08485	SM00953	CCL06_RS08485
CCL06_RS08505	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS08515	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08520	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08535	SM00344	helix_turn_helix ASNC type
CCL06_RS08540	SM00843	CCL06_RS08540
CCL06_RS08550	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08560	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS08625	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS08630	SM00411	bacterial (prokaryotic) histone like domain
CCL06_RS08635	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS08640	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08700	SM00634	Bacterial Ig-like domain (group 1)
CCL06_RS08715	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS08750	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08765	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS08795	SM00981	CCL06_RS08795
CCL06_RS08800	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS08870	SM00851	MGS-like domain
CCL06_RS08885	SM00881	CoA binding domain
CCL06_RS08890	SM00992	Hemimethylated DNA-binding protein YccV like
CCL06_RS08895	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CCL06_RS08910	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS08950	SM00091	PAS domain
CCL06_RS08950	SM00267	diguanylate cyclase
CCL06_RS09130	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS09150	SM00855	Phosphoglycerate mutase family
CCL06_RS09195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS09195	SM00895	CCL06_RS09195
CCL06_RS09235	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS09250	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS09265	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS09305	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS09325	SM00822	CCL06_RS09325
CCL06_RS09385	SM00903	Flavin reductase like domain
CCL06_RS09425	SM00903	Flavin reductase like domain
CCL06_RS09525	SM00481	DNA polymerase alpha chain like domain
CCL06_RS09555	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS09580	SM00506	Appr-1"-p processing enzyme
CCL06_RS09625	SM00450	Rhodanese Homology Domain
CCL06_RS09630	SM00867	YceI-like domain 
CCL06_RS09705	SM00858	CCL06_RS09705
CCL06_RS09750	SM00047	Lysozyme subfamily 2
CCL06_RS09775	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS09785	SM00363	S4 RNA-binding domain
CCL06_RS09815	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CCL06_RS09820	SM00822	CCL06_RS09820
CCL06_RS09830	SM00825	Beta-ketoacyl synthase
CCL06_RS09950	SM00257	Lysin motif
CCL06_RS09955	SM00487	DEAD-like helicases superfamily
CCL06_RS09955	SM00490	helicase superfamily c-terminal domain
CCL06_RS09955	SM00982	CCL06_RS09955
CCL06_RS09955	SM01058	CarD-like/TRCF domain
CCL06_RS09970	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS09990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS10015	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS10025	SM01321	CCL06_RS10025
CCL06_RS10030	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CCL06_RS10035	SM00387	Histidine kinase-like ATPases
CCL06_RS10035	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS10040	SM00448	cheY-homologous receiver domain
CCL06_RS10040	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS10070	SM01329	CCL06_RS10070
CCL06_RS10085	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS10090	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS10095	SM00267	diguanylate cyclase
CCL06_RS10115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS10115	SM00267	diguanylate cyclase
CCL06_RS10145	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS10205	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS10260	SM01252	CCL06_RS10260
CCL06_RS10265	SM00507	HNH nucleases
CCL06_RS10370	SM00635	Bacterial Ig-like domain 2
CCL06_RS10400	SM00232	JAB/MPN domain
CCL06_RS10415	SM00060	Fibronectin type 3 domain
CCL06_RS10445	SM00763	PrkA AAA domain
CCL06_RS10460	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCL06_RS10475	SM00636	CCL06_RS10475
CCL06_RS10485	SM00870	CCL06_RS10485
CCL06_RS10510	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCL06_RS10510	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCL06_RS10510	SM00493	CCL06_RS10510
CCL06_RS10515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CCL06_RS10540	SM00450	Rhodanese Homology Domain
CCL06_RS10545	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS10605	SM00465	GIY-YIG type nucleases (URI domain)
CCL06_RS10635	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS10650	SM01060	CCL06_RS10650
CCL06_RS10710	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCL06_RS10740	SM00873	B3/4 domain
CCL06_RS10740	SM00874	tRNA synthetase B5 domain
CCL06_RS10740	SM00896	Ferredoxin-fold anticodon binding domain
CCL06_RS10745	SM00411	bacterial (prokaryotic) histone like domain
CCL06_RS10760	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS10795	SM00882	Coenzyme A transferase
CCL06_RS10800	SM00882	Coenzyme A transferase
CCL06_RS10810	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS10860	SM01217	CCL06_RS10860
CCL06_RS10925	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS10935	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS10955	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS10955	SM01034	Sensors of blue-light using FAD
CCL06_RS10960	SM00422	helix_turn_helix, mercury resistance
CCL06_RS10985	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS11005	SM00257	Lysin motif
CCL06_RS11025	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCL06_RS11030	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS11030	SM00930	CCL06_RS11030
CCL06_RS11060	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS11065	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS11065	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS11075	SM00387	Histidine kinase-like ATPases
CCL06_RS11075	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS11080	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS11080	SM00448	cheY-homologous receiver domain
CCL06_RS11095	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS11100	SM00947	Carbonic anhydrase
CCL06_RS11145	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS11180	SM00479	CCL06_RS11180
CCL06_RS11235	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS11240	SM00267	diguanylate cyclase
CCL06_RS11265	SM00363	S4 RNA-binding domain
CCL06_RS11285	SM00478	endonuclease III
CCL06_RS11285	SM00525	CCL06_RS11285
CCL06_RS11295	SM00900	CCL06_RS11295
CCL06_RS11355	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS11385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS11385	SM00387	Histidine kinase-like ATPases
CCL06_RS11385	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS11400	SM00990	CCL06_RS11400
CCL06_RS11420	SM00448	cheY-homologous receiver domain
CCL06_RS11420	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS11445	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CCL06_RS11445	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CCL06_RS11465	SM00100	Cyclic nucleotide-monophosphate binding domain
CCL06_RS11465	SM00419	helix_turn_helix, cAMP Regulatory protein
CCL06_RS11495	SM00463	Small MutS-related domain
CCL06_RS11500	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS11500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS11500	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS11550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS11565	SM00507	HNH nucleases
CCL06_RS11600	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS11600	SM00267	diguanylate cyclase
CCL06_RS11640	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS11650	SM01230	CCL06_RS11650
CCL06_RS11690	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCL06_RS11690	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS11715	SM00422	helix_turn_helix, mercury resistance
CCL06_RS11755	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS11775	SM00387	Histidine kinase-like ATPases
CCL06_RS11775	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS11780	SM00448	cheY-homologous receiver domain
CCL06_RS11780	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS11825	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS11855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS11880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS11880	SM00895	CCL06_RS11880
CCL06_RS11895	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS11895	SM00091	PAS domain
CCL06_RS11895	SM00267	diguanylate cyclase
CCL06_RS11930	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS11940	SM00267	diguanylate cyclase
CCL06_RS12230	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS12230	SM00487	DEAD-like helicases superfamily
CCL06_RS12230	SM00490	helicase superfamily c-terminal domain
CCL06_RS12230	SM00847	Helicase associated domain (HA2)  Add an annotation
CCL06_RS12260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCL06_RS12275	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS12275	SM01134	CCL06_RS12275
CCL06_RS12315	SM00829	Enoylreductase
CCL06_RS12320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS12320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS12320	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS12325	SM00564	beta-propeller repeat
CCL06_RS12365	SM00822	CCL06_RS12365
CCL06_RS12370	SM00642	Alpha-amylase domain
CCL06_RS12410	SM01150	CCL06_RS12410
CCL06_RS12430	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS12480	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS12490	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS12515	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS12520	SM00450	Rhodanese Homology Domain
CCL06_RS12550	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS12575	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS12580	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS12635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS12635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS12635	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS12650	SM00267	diguanylate cyclase
CCL06_RS12655	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS12655	SM00267	diguanylate cyclase
CCL06_RS12700	SM00448	cheY-homologous receiver domain
CCL06_RS12700	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS12705	SM00387	Histidine kinase-like ATPases
CCL06_RS12705	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS12725	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS12725	SM01134	CCL06_RS12725
CCL06_RS12870	SM00448	cheY-homologous receiver domain
CCL06_RS12870	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS12875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS12875	SM00387	Histidine kinase-like ATPases
CCL06_RS12875	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS12910	SM00642	Alpha-amylase domain
CCL06_RS12915	SM00642	Alpha-amylase domain
CCL06_RS12920	SM00642	Alpha-amylase domain
CCL06_RS12935	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS12965	SM00331	Sigma factor PP2C-like phosphatases
CCL06_RS12965	SM00448	cheY-homologous receiver domain
CCL06_RS13005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCL06_RS13005	SM00387	Histidine kinase-like ATPases
CCL06_RS13005	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS13005	SM00448	cheY-homologous receiver domain
CCL06_RS13060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS13060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS13065	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS13070	SM00640	Glycosyl hydrolases family 32
CCL06_RS13090	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS13090	SM01034	Sensors of blue-light using FAD
CCL06_RS13125	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13130	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13150	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS13165	SM00919	Malic enzyme, NAD binding domain
CCL06_RS13165	SM01274	CCL06_RS13165
CCL06_RS13175	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13180	SM00829	Enoylreductase
CCL06_RS13200	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13290	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13295	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13370	SM00764	Citrate lyase ligase C-terminal domain
CCL06_RS13400	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS13410	SM00903	Flavin reductase like domain
CCL06_RS13420	SM00838	Elongation factor G C-terminus
CCL06_RS13420	SM00889	Elongation factor G, domain IV
CCL06_RS13425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS13445	SM00919	Malic enzyme, NAD binding domain
CCL06_RS13445	SM01274	CCL06_RS13445
CCL06_RS13465	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS13490	SM00857	Resolvase, N terminal domain
CCL06_RS13565	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13580	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS13630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS13630	SM00895	CCL06_RS13630
CCL06_RS13635	SM00829	Enoylreductase
CCL06_RS13640	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS13705	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS13750	SM00890	Domain of unknown function
CCL06_RS13780	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS13785	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS13810	SM00487	DEAD-like helicases superfamily
CCL06_RS13810	SM00490	helicase superfamily c-terminal domain
CCL06_RS13825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS13830	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS13830	SM00267	diguanylate cyclase
CCL06_RS13835	SM00091	PAS domain
CCL06_RS13835	SM00267	diguanylate cyclase
CCL06_RS13930	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS13930	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS13975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS13990	SM00091	PAS domain
CCL06_RS13990	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14005	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS14015	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14060	SM00642	Alpha-amylase domain
CCL06_RS14085	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14105	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14110	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS14120	SM00387	Histidine kinase-like ATPases
CCL06_RS14120	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS14125	SM00448	cheY-homologous receiver domain
CCL06_RS14125	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS14155	SM00357	Cold shock protein domain
CCL06_RS14155	SM00955	CCL06_RS14155
CCL06_RS14160	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS14160	SM00091	PAS domain
CCL06_RS14160	SM00267	diguanylate cyclase
CCL06_RS14175	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS14175	SM01134	CCL06_RS14175
CCL06_RS14190	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CCL06_RS14195	SM00028	Tetratricopeptide repeats
CCL06_RS14205	SM00014	Acid phosphatase homologues
CCL06_RS14235	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCL06_RS14235	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCL06_RS14235	SM00493	CCL06_RS14235
CCL06_RS14255	SM00822	CCL06_RS14255
CCL06_RS14265	SM00363	S4 RNA-binding domain
CCL06_RS14275	SM00481	DNA polymerase alpha chain like domain
CCL06_RS14350	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS14365	SM00155	Phospholipase D. Active site motifs.
CCL06_RS14380	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14385	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14420	SM00528	Domain in histone-like proteins of HNS family
CCL06_RS14430	SM00448	cheY-homologous receiver domain
CCL06_RS14460	SM00344	helix_turn_helix ASNC type
CCL06_RS14485	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS14495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS14495	SM00387	Histidine kinase-like ATPases
CCL06_RS14500	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS14500	SM00448	cheY-homologous receiver domain
CCL06_RS14510	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS14520	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14535	SM01012	CCL06_RS14535
CCL06_RS14545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS14545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS14585	SM00937	CCL06_RS14585
CCL06_RS14610	SM01400	CCL06_RS14610
CCL06_RS14620	SM00422	helix_turn_helix, mercury resistance
CCL06_RS14690	SM00860	SMI1 / KNR4 family
CCL06_RS14890	SM00248	ankyrin repeats
CCL06_RS14905	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS14905	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS14935	SM00331	Sigma factor PP2C-like phosphatases
CCL06_RS14935	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCL06_RS15060	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS15065	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCL06_RS15075	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS15125	SM01091	Transporter associated domain
CCL06_RS15130	SM01005	Alanine racemase, C-terminal domain
CCL06_RS15145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS15190	SM00341	Helicase and RNase D C-terminal
CCL06_RS15190	SM00474	3'-5' exonuclease
CCL06_RS15210	SM00487	DEAD-like helicases superfamily
CCL06_RS15210	SM00491	CCL06_RS15210
CCL06_RS15240	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS15245	SM01091	Transporter associated domain
CCL06_RS15290	SM00357	Cold shock protein domain
CCL06_RS15320	SM00346	helix_turn_helix isocitrate lyase regulation
CCL06_RS15335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCL06_RS15335	SM00245	tail specific protease
CCL06_RS15340	SM00945	ProQ/FINO family
CCL06_RS15345	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS15405	SM00479	CCL06_RS15405
CCL06_RS15455	SM00257	Lysin motif
CCL06_RS15465	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15475	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCL06_RS15545	SM00836	DALR anticodon binding domain
CCL06_RS15545	SM01016	Arginyl tRNA synthetase N terminal dom
CCL06_RS15570	SM00448	cheY-homologous receiver domain
CCL06_RS15575	SM00448	cheY-homologous receiver domain
CCL06_RS15580	SM00138	Methyltransferase, chemotaxis proteins 
CCL06_RS15585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS15585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS15585	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS15590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS15590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS15590	SM00319	Homologues of the ligand binding domain of Tar
CCL06_RS15595	SM00972	Spore Coat Protein U domain
CCL06_RS15610	SM00972	Spore Coat Protein U domain
CCL06_RS15615	SM00972	Spore Coat Protein U domain
CCL06_RS15625	SM00260	Two component signalling adaptor domain
CCL06_RS15630	SM00073	Histidine Phosphotransfer domain
CCL06_RS15630	SM00260	Two component signalling adaptor domain
CCL06_RS15630	SM00387	Histidine kinase-like ATPases
CCL06_RS15630	SM01231	CCL06_RS15630
CCL06_RS15675	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15745	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15750	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15815	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCL06_RS15815	SM00465	GIY-YIG type nucleases (URI domain)
CCL06_RS15820	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS15820	SM00448	cheY-homologous receiver domain
CCL06_RS15830	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS15835	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15850	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS15850	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCL06_RS15890	SM00642	Alpha-amylase domain
CCL06_RS15920	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS15970	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS15990	SM00267	diguanylate cyclase
CCL06_RS16020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCL06_RS16035	SM00387	Histidine kinase-like ATPases
CCL06_RS16040	SM00448	cheY-homologous receiver domain
CCL06_RS16050	SM00900	CCL06_RS16050
CCL06_RS16095	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS16100	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS16120	SM00260	Two component signalling adaptor domain
CCL06_RS16125	SM00073	Histidine Phosphotransfer domain
CCL06_RS16125	SM00260	Two component signalling adaptor domain
CCL06_RS16125	SM00387	Histidine kinase-like ATPases
CCL06_RS16125	SM01231	CCL06_RS16125
CCL06_RS16155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS16155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS16170	SM00047	Lysozyme subfamily 2
CCL06_RS16215	SM00858	CCL06_RS16215
CCL06_RS16255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS16255	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS16270	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS16325	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS16350	SM00138	Methyltransferase, chemotaxis proteins 
CCL06_RS16355	SM00448	cheY-homologous receiver domain
CCL06_RS16360	SM00448	cheY-homologous receiver domain
CCL06_RS16385	SM00869	Autotransporter beta-domain
CCL06_RS16400	SM00830	Chorismate mutase type II
CCL06_RS16430	SM01006	Siderophore biosynthesis protein domain
CCL06_RS16460	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS16595	SM00953	CCL06_RS16595
CCL06_RS16620	SM00331	Sigma factor PP2C-like phosphatases
CCL06_RS16620	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCL06_RS16625	SM00220	Serine/Threonine protein kinases, catalytic domain
CCL06_RS16675	SM00903	Flavin reductase like domain
CCL06_RS16695	SM00825	Beta-ketoacyl synthase
CCL06_RS16795	SM00871	Bacterial transcription activator, effector binding domain
CCL06_RS16800	SM00936	Penicillin-binding protein 5, C-terminal domain 
CCL06_RS16875	SM00984	UDP binding domain
CCL06_RS16890	SM01350	CCL06_RS16890
CCL06_RS16935	SM00858	CCL06_RS16935
CCL06_RS17055	SM00226	Low molecular weight phosphatase family
CCL06_RS17065	SM01091	Transporter associated domain
CCL06_RS17085	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS17085	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCL06_RS17085	SM00091	PAS domain
CCL06_RS17085	SM00267	diguanylate cyclase
CCL06_RS17090	SM00478	endonuclease III
CCL06_RS17090	SM01009	AlkA N-terminal domain
CCL06_RS17120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS17120	SM00387	Histidine kinase-like ATPases
CCL06_RS17120	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS17125	SM00448	cheY-homologous receiver domain
CCL06_RS17125	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS17145	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CCL06_RS17150	SM01133	CCL06_RS17150
CCL06_RS17170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS17170	SM00866	CCL06_RS17170
CCL06_RS17205	SM00640	Glycosyl hydrolases family 32
CCL06_RS17215	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS17255	SM00226	Low molecular weight phosphatase family
CCL06_RS17290	SM00448	cheY-homologous receiver domain
CCL06_RS17290	SM00850	LytTr DNA-binding domain
CCL06_RS17295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS17295	SM00387	Histidine kinase-like ATPases
CCL06_RS17300	SM00422	helix_turn_helix, mercury resistance
CCL06_RS17315	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS17330	SM01217	CCL06_RS17330
CCL06_RS17395	SM01230	CCL06_RS17395
CCL06_RS17405	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS17415	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS17475	SM00518	AP endonuclease family 2
CCL06_RS17525	SM00841	Elongation factor P, C-terminal
CCL06_RS17525	SM01185	CCL06_RS17525
CCL06_RS17545	SM00014	Acid phosphatase homologues
CCL06_RS17555	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS17575	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS17595	SM00363	S4 RNA-binding domain
CCL06_RS17600	SM00487	DEAD-like helicases superfamily
CCL06_RS17600	SM00490	helicase superfamily c-terminal domain
CCL06_RS17675	SM00924	MgtE intracellular N domain
CCL06_RS17680	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS17690	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS17705	SM00387	Histidine kinase-like ATPases
CCL06_RS17710	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS17710	SM00448	cheY-homologous receiver domain
CCL06_RS17715	SM00387	Histidine kinase-like ATPases
CCL06_RS17715	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS17715	SM00448	cheY-homologous receiver domain
CCL06_RS17720	SM00434	DNA Topoisomerase IV
CCL06_RS17770	SM00852	Probable molybdopterin binding domain
CCL06_RS17785	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS17820	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS17825	SM00260	Two component signalling adaptor domain
CCL06_RS17825	SM00448	cheY-homologous receiver domain
CCL06_RS17865	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS17865	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CCL06_RS17870	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CCL06_RS17905	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCL06_RS17940	SM00861	Transketolase, pyrimidine binding domain
CCL06_RS17970	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS17995	SM00905	Dihydroneopterin aldolase
CCL06_RS18010	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS18025	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS18030	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS18075	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCL06_RS18095	SM00825	Beta-ketoacyl synthase
CCL06_RS18135	SM00463	Small MutS-related domain
CCL06_RS18210	SM00387	Histidine kinase-like ATPases
CCL06_RS18215	SM00448	cheY-homologous receiver domain
CCL06_RS18215	SM00850	LytTr DNA-binding domain
CCL06_RS18255	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS18255	SM00267	diguanylate cyclase
CCL06_RS18325	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCL06_RS18325	SM00292	breast cancer carboxy-terminal domain
CCL06_RS18325	SM00532	Ligase N family
CCL06_RS18330	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CCL06_RS18380	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS18420	SM00646	CCL06_RS18420
CCL06_RS18430	SM00919	Malic enzyme, NAD binding domain
CCL06_RS18430	SM01274	CCL06_RS18430
CCL06_RS18440	SM00861	Transketolase, pyrimidine binding domain
CCL06_RS18465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS18465	SM00387	Histidine kinase-like ATPases
CCL06_RS18515	SM01130	CCL06_RS18515
CCL06_RS18615	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS18615	SM00267	diguanylate cyclase
CCL06_RS18670	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS18725	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCL06_RS18725	SM01240	CCL06_RS18725
CCL06_RS18765	SM00564	beta-propeller repeat
CCL06_RS18785	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS18795	SM00562	CCL06_RS18795
CCL06_RS18805	SM01359	CCL06_RS18805
CCL06_RS18805	SM01360	CCL06_RS18805
CCL06_RS18820	SM00450	Rhodanese Homology Domain
CCL06_RS18855	SM00271	DnaJ molecular chaperone homology domain
CCL06_RS18925	SM00938	Nitrogen regulatory protein P-II
CCL06_RS18930	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS18930	SM00448	cheY-homologous receiver domain
CCL06_RS18940	SM00387	Histidine kinase-like ATPases
CCL06_RS18940	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS18945	SM01211	CCL06_RS18945
CCL06_RS18955	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS19010	SM00358	Double-stranded RNA binding motif
CCL06_RS19010	SM00535	Ribonuclease III family
CCL06_RS19060	SM00487	DEAD-like helicases superfamily
CCL06_RS19060	SM00490	helicase superfamily c-terminal domain
CCL06_RS19070	SM00986	Uracil DNA glycosylase superfamily
CCL06_RS19070	SM00987	UreE urease accessory protein, C-terminal domain 
CCL06_RS19075	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCL06_RS19090	SM01144	CCL06_RS19090
CCL06_RS19095	SM00881	CoA binding domain
CCL06_RS19100	SM00155	Phospholipase D. Active site motifs.
CCL06_RS19140	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19140	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS19150	SM00363	S4 RNA-binding domain
CCL06_RS19165	SM00830	Chorismate mutase type II
CCL06_RS19175	SM00830	Chorismate mutase type II
CCL06_RS19195	SM00267	diguanylate cyclase
CCL06_RS19235	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19235	SM00962	SRP54-type protein, GTPase domain
CCL06_RS19235	SM00963	SRP54-type protein, helical bundle domain
CCL06_RS19245	SM01091	Transporter associated domain
CCL06_RS19320	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS19340	SM00867	YceI-like domain 
CCL06_RS19355	SM00028	Tetratricopeptide repeats
CCL06_RS19370	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19400	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS19405	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS19465	SM00248	ankyrin repeats
CCL06_RS19480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCL06_RS19485	SM00450	Rhodanese Homology Domain
CCL06_RS19495	SM00528	Domain in histone-like proteins of HNS family
CCL06_RS19535	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19575	SM00917	LeuA allosteric (dimerisation) domain
CCL06_RS19580	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS19635	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCL06_RS19645	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19665	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19700	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS19700	SM01134	CCL06_RS19700
CCL06_RS19710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS19710	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19715	SM00849	Metallo-beta-lactamase superfamily
CCL06_RS19750	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS19850	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS19875	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS19880	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CCL06_RS19880	SM00534	ATPase domain of DNA mismatch repair MUTS family
CCL06_RS19900	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCL06_RS19910	SM00257	Lysin motif
CCL06_RS20020	SM01192	CCL06_RS20020
CCL06_RS20020	SM01193	CCL06_RS20020
CCL06_RS20035	SM00954	Region found in RelA / SpoT proteins
CCL06_RS20045	SM00073	Histidine Phosphotransfer domain
CCL06_RS20045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS20045	SM00387	Histidine kinase-like ATPases
CCL06_RS20045	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS20045	SM00448	cheY-homologous receiver domain
CCL06_RS20055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS20060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CCL06_RS20115	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CCL06_RS20115	SM00475	5'-3' exonuclease
CCL06_RS20155	SM00925	MltA specific insert domain
CCL06_RS20165	SM00646	CCL06_RS20165
CCL06_RS20225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCL06_RS20235	SM00927	DNA mismatch repair enzyme MutH
CCL06_RS20255	SM00563	Phosphate acyltransferases
CCL06_RS20260	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS20270	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS20330	SM00344	helix_turn_helix ASNC type
CCL06_RS20350	SM00091	PAS domain
CCL06_RS20350	SM00387	Histidine kinase-like ATPases
CCL06_RS20355	SM00448	cheY-homologous receiver domain
CCL06_RS20370	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS20415	SM00257	Lysin motif
CCL06_RS20515	SM01011	Aminopeptidase P, N-terminal domain
CCL06_RS20590	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCL06_RS20595	SM00861	Transketolase, pyrimidine binding domain
CCL06_RS20640	SM00731	SprT homologues.
CCL06_RS20665	SM00732	Likely ribonuclease with RNase H fold.
CCL06_RS20685	SM01152	CCL06_RS20685
CCL06_RS20695	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS20725	SM00478	endonuclease III
CCL06_RS20725	SM00525	CCL06_RS20725
CCL06_RS20775	SM00764	Citrate lyase ligase C-terminal domain
CCL06_RS20790	SM00091	PAS domain
CCL06_RS20790	SM00387	Histidine kinase-like ATPases
CCL06_RS20795	SM00448	cheY-homologous receiver domain
CCL06_RS20825	SM00387	Histidine kinase-like ATPases
CCL06_RS20825	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS20825	SM00448	cheY-homologous receiver domain
CCL06_RS20830	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS20830	SM00448	cheY-homologous receiver domain
CCL06_RS20840	SM00869	Autotransporter beta-domain
CCL06_RS20875	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS20880	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS20945	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS20945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS20980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS21010	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS21045	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS21065	SM00829	Enoylreductase
CCL06_RS21155	SM00965	Secretin and TonB N terminus short domain
CCL06_RS21175	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS21200	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS21205	SM01038	Beta galactosidase small chain
CCL06_RS21280	SM00563	Phosphate acyltransferases
CCL06_RS21285	SM00434	DNA Topoisomerase IV
CCL06_RS21295	SM00448	cheY-homologous receiver domain
CCL06_RS21295	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS21300	SM00387	Histidine kinase-like ATPases
CCL06_RS21300	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS21335	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS21345	SM00387	Histidine kinase-like ATPases
CCL06_RS21345	SM00433	TopoisomeraseII
CCL06_RS21415	SM01118	CCL06_RS21415
CCL06_RS21425	SM00287	Bacterial SH3 domain homologues
CCL06_RS21440	SM00905	Dihydroneopterin aldolase
CCL06_RS21445	SM01207	CCL06_RS21445
CCL06_RS21475	SM00988	UreE urease accessory protein, N-terminal domain
CCL06_RS21500	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS21500	SM00448	cheY-homologous receiver domain
CCL06_RS21520	SM00400	zinc finger
CCL06_RS21520	SM00493	CCL06_RS21520
CCL06_RS21520	SM00766	DNA primase DnaG DnaB-binding
CCL06_RS21535	SM00986	Uracil DNA glycosylase superfamily
CCL06_RS21535	SM00987	UreE urease accessory protein, C-terminal domain 
CCL06_RS21630	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS21670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS21670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS21675	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCL06_RS21675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCL06_RS21685	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS21690	SM00873	B3/4 domain
CCL06_RS21700	SM01133	CCL06_RS21700
CCL06_RS21720	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS21765	SM00858	CCL06_RS21765
CCL06_RS21785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS21785	SM00895	CCL06_RS21785
CCL06_RS21905	SM00858	CCL06_RS21905
CCL06_RS21935	SM00829	Enoylreductase
CCL06_RS21940	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS21940	SM01134	CCL06_RS21940
CCL06_RS21975	SM00749	bacterial OsmY and nodulation domain
CCL06_RS22035	SM00487	DEAD-like helicases superfamily
CCL06_RS22035	SM00490	helicase superfamily c-terminal domain
CCL06_RS22040	SM00028	Tetratricopeptide repeats
CCL06_RS22045	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS22045	SM00322	K homology RNA-binding domain
CCL06_RS22050	SM01387	CCL06_RS22050
CCL06_RS22070	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS22110	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS22120	SM01103	CCL06_RS22120
CCL06_RS22135	SM00448	cheY-homologous receiver domain
CCL06_RS22135	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS22140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS22140	SM00387	Histidine kinase-like ATPases
CCL06_RS22140	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS22205	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS22235	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS22275	SM00073	Histidine Phosphotransfer domain
CCL06_RS22275	SM00091	PAS domain
CCL06_RS22275	SM00387	Histidine kinase-like ATPases
CCL06_RS22275	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS22275	SM00448	cheY-homologous receiver domain
CCL06_RS22315	SM00829	Enoylreductase
CCL06_RS22320	SM01120	CCL06_RS22320
CCL06_RS22330	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS22395	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCL06_RS22400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCL06_RS22470	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS22500	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS22500	SM00267	diguanylate cyclase
CCL06_RS22505	SM00829	Enoylreductase
CCL06_RS22530	SM00878	Biotin carboxylase C-terminal domain
CCL06_RS22550	SM01057	Eukaryotic-type carbonic anhydrase
CCL06_RS22570	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS22570	SM00267	diguanylate cyclase
CCL06_RS22595	SM00062	Bacterial periplasmic substrate-binding proteins
CCL06_RS22610	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS22720	SM00422	helix_turn_helix, mercury resistance
CCL06_RS22735	SM00662	RNA polymerases D
CCL06_RS22740	SM00363	S4 RNA-binding domain
CCL06_RS22740	SM01390	CCL06_RS22740
CCL06_RS22805	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCL06_RS22810	SM01374	CCL06_RS22810
CCL06_RS22830	SM00322	K homology RNA-binding domain
CCL06_RS22845	SM01382	CCL06_RS22845
CCL06_RS22845	SM01383	CCL06_RS22845
CCL06_RS22865	SM01403	CCL06_RS22865
CCL06_RS22890	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS22950	SM00495	Chitin-binding domain type 3
CCL06_RS22960	SM00838	Elongation factor G C-terminus
CCL06_RS22960	SM00889	Elongation factor G, domain IV
CCL06_RS23030	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS23060	SM00100	Cyclic nucleotide-monophosphate binding domain
CCL06_RS23060	SM00419	helix_turn_helix, cAMP Regulatory protein
CCL06_RS23160	SM00965	Secretin and TonB N terminus short domain
CCL06_RS23210	SM00363	S4 RNA-binding domain
CCL06_RS23225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS23225	SM00387	Histidine kinase-like ATPases
CCL06_RS23225	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS23230	SM00448	cheY-homologous receiver domain
CCL06_RS23230	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS23240	SM00316	Ribosomal protein S1-like RNA-binding domain
CCL06_RS23240	SM00732	Likely ribonuclease with RNase H fold.
CCL06_RS23245	SM00899	CCL06_RS23245
CCL06_RS23295	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS23300	SM00420	helix_turn_helix, Deoxyribose operon repressor
CCL06_RS23300	SM01134	CCL06_RS23300
CCL06_RS23310	SM00450	Rhodanese Homology Domain
CCL06_RS23340	SM00642	Alpha-amylase domain
CCL06_RS23345	SM00642	Alpha-amylase domain
CCL06_RS23350	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCL06_RS23465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS23465	SM00387	Histidine kinase-like ATPases
CCL06_RS23465	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS23470	SM00448	cheY-homologous receiver domain
CCL06_RS23470	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS23510	SM00746	metallochaperone-like domain
CCL06_RS23540	SM00448	cheY-homologous receiver domain
CCL06_RS23540	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS23545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS23545	SM00387	Histidine kinase-like ATPases
CCL06_RS23545	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS23565	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS23580	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS23665	SM00421	helix_turn_helix, Lux Regulon
CCL06_RS23700	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS23720	SM00052	Putative diguanylate phosphodiesterase
CCL06_RS23720	SM00267	diguanylate cyclase
CCL06_RS23720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS23725	SM00028	Tetratricopeptide repeats
CCL06_RS23865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CCL06_RS23960	SM00341	Helicase and RNase D C-terminal
CCL06_RS23960	SM00487	DEAD-like helicases superfamily
CCL06_RS23960	SM00490	helicase superfamily c-terminal domain
CCL06_RS23960	SM00956	CCL06_RS23960
CCL06_RS24020	SM01219	CCL06_RS24020
CCL06_RS24115	SM00984	UDP binding domain
CCL06_RS24135	SM00357	Cold shock protein domain
CCL06_RS24135	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24135	SM00959	Rho termination factor, N-terminal domain
CCL06_RS24145	SM00487	DEAD-like helicases superfamily
CCL06_RS24145	SM00490	helicase superfamily c-terminal domain
CCL06_RS24205	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24305	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCL06_RS24320	SM00342	helix_turn_helix, arabinose operon control protein
CCL06_RS24370	SM00487	DEAD-like helicases superfamily
CCL06_RS24370	SM00490	helicase superfamily c-terminal domain
CCL06_RS24375	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS24390	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24390	SM01086	C-terminal, D2-small domain, of ClpB protein
CCL06_RS24475	SM00448	cheY-homologous receiver domain
CCL06_RS24475	SM00862	Transcriptional regulatory protein, C terminal
CCL06_RS24480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCL06_RS24480	SM00387	Histidine kinase-like ATPases
CCL06_RS24480	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS24510	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS24515	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS24560	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCL06_RS24585	SM00530	Helix-turn-helix XRE-family like proteins 
CCL06_RS24630	SM01230	CCL06_RS24630
CCL06_RS24640	SM00091	PAS domain
CCL06_RS24640	SM00387	Histidine kinase-like ATPases
CCL06_RS24640	SM00388	His Kinase A (phosphoacceptor) domain
CCL06_RS24645	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24645	SM00448	cheY-homologous receiver domain
CCL06_RS24655	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCL06_RS24680	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CCL06_RS24680	SM00474	3'-5' exonuclease
CCL06_RS24680	SM00475	5'-3' exonuclease
CCL06_RS24680	SM00482	DNA polymerase A domain
CCL06_RS24685	SM00563	Phosphate acyltransferases
CCL06_RS24735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCL06_RS24735	SM00895	CCL06_RS24735
CCL06_RS24745	SM00354	helix_turn _helix lactose operon repressor
CCL06_RS24765	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24780	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24785	SM00327	von Willebrand factor (vWF) type A domain
CCL06_RS24795	SM00344	helix_turn_helix ASNC type
CCL06_RS24805	SM01228	CCL06_RS24805
CCL06_RS24850	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24885	SM00382	ATPases associated with a variety of cellular activities
CCL06_RS24935	SM01234	CCL06_RS24935
