LI65_RS00005 SM00387 Histidine kinase-like ATPases LI65_RS00005 SM00433 TopoisomeraseII LI65_RS00915 SM00382 ATPases associated with a variety of cellular activities LI65_RS00915 SM00760 Bacterial dnaA protein helix-turn-helix domain LI65_RS00920 SM00480 DNA polymerase III beta subunit LI65_RS00930 SM00387 Histidine kinase-like ATPases LI65_RS00930 SM00433 TopoisomeraseII LI65_RS00940 SM00829 Enoylreductase LI65_RS00950 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS00950 SM00895 LI65_RS00950 LI65_RS00965 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS01000 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS01000 SM00866 LI65_RS01000 LI65_RS01015 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS01105 SM00421 helix_turn_helix, Lux Regulon LI65_RS01105 SM00448 cheY-homologous receiver domain LI65_RS01110 SM00387 Histidine kinase-like ATPases LI65_RS01180 SM00354 helix_turn _helix lactose operon repressor LI65_RS01235 SM00052 Putative diguanylate phosphodiesterase LI65_RS01240 SM00421 helix_turn_helix, Lux Regulon LI65_RS01245 SM00421 helix_turn_helix, Lux Regulon LI65_RS01270 SM00862 Transcriptional regulatory protein, C terminal LI65_RS01315 SM00382 ATPases associated with a variety of cellular activities LI65_RS01335 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS01350 SM00095 Transthyretin LI65_RS01355 SM00422 helix_turn_helix, mercury resistance LI65_RS01390 SM00421 helix_turn_helix, Lux Regulon LI65_RS01395 SM00862 Transcriptional regulatory protein, C terminal LI65_RS01405 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS01445 SM00255 Toll - interleukin 1 - resistance LI65_RS01480 SM00487 DEAD-like helicases superfamily LI65_RS01480 SM00490 helicase superfamily c-terminal domain LI65_RS01490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS01490 SM00954 Region found in RelA / SpoT proteins LI65_RS01495 SM01409 LI65_RS01495 LI65_RS01500 SM00072 Guanylate kinase homologues. LI65_RS01505 SM00532 Ligase N family LI65_RS01535 SM00226 Low molecular weight phosphatase family LI65_RS01595 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LI65_RS01595 SM01232 LI65_RS01595 LI65_RS01675 SM00829 Enoylreductase LI65_RS01710 SM00450 Rhodanese Homology Domain LI65_RS01730 SM00971 Serine acetyltransferase, N-terminal LI65_RS01750 SM00487 DEAD-like helicases superfamily LI65_RS01750 SM00490 helicase superfamily c-terminal domain LI65_RS01760 SM00357 Cold shock protein domain LI65_RS01760 SM00382 ATPases associated with a variety of cellular activities LI65_RS01760 SM00959 Rho termination factor, N-terminal domain LI65_RS01780 SM00984 UDP binding domain LI65_RS01865 SM01219 LI65_RS01865 LI65_RS01920 SM00341 Helicase and RNase D C-terminal LI65_RS01920 SM00487 DEAD-like helicases superfamily LI65_RS01920 SM00490 helicase superfamily c-terminal domain LI65_RS01920 SM00956 LI65_RS01920 LI65_RS02010 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LI65_RS02025 SM00382 ATPases associated with a variety of cellular activities LI65_RS02030 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS02045 SM00357 Cold shock protein domain LI65_RS02070 SM00354 helix_turn _helix lactose operon repressor LI65_RS02130 SM00382 ATPases associated with a variety of cellular activities LI65_RS02135 SM00382 ATPases associated with a variety of cellular activities LI65_RS02175 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LI65_RS02175 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LI65_RS02180 SM00649 Ribosomal protein L11/L12 LI65_RS02205 SM00663 RNA polymerase I subunit A N-terminus LI65_RS02220 SM00267 diguanylate cyclase LI65_RS02225 SM00876 Biotin and Thiamin Synthesis associated domain LI65_RS02280 SM00411 bacterial (prokaryotic) histone like domain LI65_RS02290 SM01209 LI65_RS02290 LI65_RS02290 SM01210 LI65_RS02290 LI65_RS02295 SM00798 AICARFT/IMPCHase bienzyme LI65_RS02295 SM00851 MGS-like domain LI65_RS02340 SM00346 helix_turn_helix isocitrate lyase regulation LI65_RS02345 SM01018 B12 binding domain LI65_RS02365 SM00363 S4 RNA-binding domain LI65_RS02430 SM00382 ATPases associated with a variety of cellular activities LI65_RS02455 SM00563 Phosphate acyltransferases LI65_RS02505 SM00829 Enoylreductase LI65_RS02510 SM00382 ATPases associated with a variety of cellular activities LI65_RS02515 SM01005 Alanine racemase, C-terminal domain LI65_RS02555 SM00267 diguanylate cyclase LI65_RS02560 SM00052 Putative diguanylate phosphodiesterase LI65_RS02565 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS02570 SM00422 helix_turn_helix, mercury resistance LI65_RS02625 SM00671 Sel1-like repeats. LI65_RS02640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS02645 SM00448 cheY-homologous receiver domain LI65_RS02645 SM00862 Transcriptional regulatory protein, C terminal LI65_RS02675 SM00382 ATPases associated with a variety of cellular activities LI65_RS02680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS02680 SM00387 Histidine kinase-like ATPases LI65_RS02680 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS02680 SM00448 cheY-homologous receiver domain LI65_RS02700 SM00382 ATPases associated with a variety of cellular activities LI65_RS02735 SM00072 Guanylate kinase homologues. LI65_RS02745 SM00382 ATPases associated with a variety of cellular activities LI65_RS02750 SM00382 ATPases associated with a variety of cellular activities LI65_RS02775 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS02775 SM00866 LI65_RS02775 LI65_RS02790 SM00382 ATPases associated with a variety of cellular activities LI65_RS02865 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS02910 SM00883 Chaperonin 10 Kd subunit LI65_RS02945 SM00841 Elongation factor P, C-terminal LI65_RS02945 SM01185 LI65_RS02945 LI65_RS02960 SM00421 helix_turn_helix, Lux Regulon LI65_RS03030 SM00479 LI65_RS03030 LI65_RS03065 SM00646 LI65_RS03065 LI65_RS03070 SM00853 MutL C terminal dimerisation domain LI65_RS03070 SM01340 LI65_RS03070 LI65_RS03090 SM00244 prohibitin homologues LI65_RS03095 SM00244 prohibitin homologues LI65_RS03105 SM00788 Adenylosuccinate synthetase LI65_RS03115 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS03115 SM00357 Cold shock protein domain LI65_RS03115 SM00955 LI65_RS03115 LI65_RS03120 SM00967 RNA 2'-O ribose methyltransferase substrate binding LI65_RS03135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS03135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS03155 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS03155 SM01134 LI65_RS03155 LI65_RS03180 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI65_RS03190 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS03245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS03245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS03245 SM00319 Homologues of the ligand binding domain of Tar LI65_RS03255 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS03290 SM01091 Transporter associated domain LI65_RS03320 SM00354 helix_turn _helix lactose operon repressor LI65_RS03355 SM00382 ATPases associated with a variety of cellular activities LI65_RS03370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS03370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS03470 SM00872 Alpha mannosidase, middle domain LI65_RS03490 SM00642 Alpha-amylase domain LI65_RS03500 SM00354 helix_turn _helix lactose operon repressor LI65_RS03505 SM00831 Cation transporter/ATPase, N-terminus LI65_RS03565 SM01130 LI65_RS03565 LI65_RS03585 SM00346 helix_turn_helix isocitrate lyase regulation LI65_RS03685 SM00052 Putative diguanylate phosphodiesterase LI65_RS03725 SM00354 helix_turn _helix lactose operon repressor LI65_RS03775 SM00448 cheY-homologous receiver domain LI65_RS03780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS03780 SM00220 Serine/Threonine protein kinases, catalytic domain LI65_RS03780 SM00387 Histidine kinase-like ATPases LI65_RS03780 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS03785 SM00421 helix_turn_helix, Lux Regulon LI65_RS03785 SM00448 cheY-homologous receiver domain LI65_RS03800 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LI65_RS03815 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS03825 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS03835 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS03850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI65_RS03855 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS03880 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS03900 SM00833 Cobalamin synthesis protein cobW C-terminal domain LI65_RS03920 SM00903 Flavin reductase like domain LI65_RS03930 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS03970 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS03975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS03975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS03975 SM00319 Homologues of the ligand binding domain of Tar LI65_RS03995 SM00382 ATPases associated with a variety of cellular activities LI65_RS04010 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS04025 SM00421 helix_turn_helix, Lux Regulon LI65_RS04030 SM00421 helix_turn_helix, Lux Regulon LI65_RS04050 SM00267 diguanylate cyclase LI65_RS04100 SM00749 bacterial OsmY and nodulation domain LI65_RS04130 SM01133 LI65_RS04130 LI65_RS04135 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain LI65_RS04165 SM00382 ATPases associated with a variety of cellular activities LI65_RS04170 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS04175 SM00829 Enoylreductase LI65_RS04185 SM00382 ATPases associated with a variety of cellular activities LI65_RS04205 SM00855 Phosphoglycerate mutase family LI65_RS04210 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS04210 SM00871 Bacterial transcription activator, effector binding domain LI65_RS04220 SM00448 cheY-homologous receiver domain LI65_RS04220 SM00862 Transcriptional regulatory protein, C terminal LI65_RS04265 SM00852 Probable molybdopterin binding domain LI65_RS04290 SM00271 DnaJ molecular chaperone homology domain LI65_RS04310 SM00904 Riboflavin kinase LI65_RS04370 SM00354 helix_turn _helix lactose operon repressor LI65_RS04380 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LI65_RS04385 SM00851 MGS-like domain LI65_RS04385 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LI65_RS04420 SM00650 Ribosomal RNA adenine dimethylases LI65_RS04440 SM00271 DnaJ molecular chaperone homology domain LI65_RS04450 SM00487 DEAD-like helicases superfamily LI65_RS04450 SM00490 helicase superfamily c-terminal domain LI65_RS04455 SM00486 DNA polymerase type-B family LI65_RS04460 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS04475 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS04485 SM00382 ATPases associated with a variety of cellular activities LI65_RS04530 SM01329 LI65_RS04530 LI65_RS04535 SM00917 LeuA allosteric (dimerisation) domain LI65_RS04555 SM00354 helix_turn _helix lactose operon repressor LI65_RS04625 SM00842 Cell division protein FtsA LI65_RS04630 SM00864 Tubulin/FtsZ family, GTPase domain LI65_RS04630 SM00865 Tubulin/FtsZ family, C-terminal domain LI65_RS04645 SM00957 SecA DEAD-like domain LI65_RS04645 SM00958 SecA preprotein cross-linking domain LI65_RS04670 SM01240 LI65_RS04670 LI65_RS04695 SM00644 LI65_RS04695 LI65_RS04725 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS04725 SM00895 LI65_RS04725 LI65_RS04785 SM00564 beta-propeller repeat LI65_RS04795 SM00947 Carbonic anhydrase LI65_RS04800 SM00382 ATPases associated with a variety of cellular activities LI65_RS04900 SM00487 DEAD-like helicases superfamily LI65_RS04900 SM00490 helicase superfamily c-terminal domain LI65_RS04900 SM00847 Helicase associated domain (HA2) Add an annotation LI65_RS04935 SM00382 ATPases associated with a variety of cellular activities LI65_RS04980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS04985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI65_RS05005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS05050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI65_RS05060 SM00935 Outer membrane protein (OmpH-like) LI65_RS05090 SM00481 DNA polymerase alpha chain like domain LI65_RS05110 SM00977 TilS substrate C-terminal domain LI65_RS05125 SM01322 LI65_RS05125 LI65_RS05165 SM00382 ATPases associated with a variety of cellular activities LI65_RS05165 SM00930 LI65_RS05165 LI65_RS05230 SM00257 Lysin motif LI65_RS05235 SM00849 Metallo-beta-lactamase superfamily LI65_RS05250 SM00479 LI65_RS05250 LI65_RS05260 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS05260 SM00895 LI65_RS05260 LI65_RS05265 SM00382 ATPases associated with a variety of cellular activities LI65_RS05270 SM00382 ATPases associated with a variety of cellular activities LI65_RS05330 SM00900 LI65_RS05330 LI65_RS05385 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LI65_RS05440 SM00052 Putative diguanylate phosphodiesterase LI65_RS05440 SM00267 diguanylate cyclase LI65_RS05450 SM00267 diguanylate cyclase LI65_RS05450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS05470 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS05475 SM00382 ATPases associated with a variety of cellular activities LI65_RS05490 SM00563 Phosphate acyltransferases LI65_RS05495 SM01004 Delta-aminolevulinic acid dehydratase LI65_RS05565 SM00267 diguanylate cyclase LI65_RS05620 SM00448 cheY-homologous receiver domain LI65_RS05620 SM00862 Transcriptional regulatory protein, C terminal LI65_RS05625 SM00091 PAS domain LI65_RS05625 SM00387 Histidine kinase-like ATPases LI65_RS05625 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS05640 SM00642 Alpha-amylase domain LI65_RS05675 SM01323 LI65_RS05675 LI65_RS05740 SM00861 Transketolase, pyrimidine binding domain LI65_RS05755 SM00981 LI65_RS05755 LI65_RS05760 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS05760 SM00866 LI65_RS05760 LI65_RS05800 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS05805 SM00354 helix_turn _helix lactose operon repressor LI65_RS05825 SM00382 ATPases associated with a variety of cellular activities LI65_RS05900 SM00382 ATPases associated with a variety of cellular activities LI65_RS05900 SM00994 ClpX C4-type zinc finger LI65_RS05900 SM01086 C-terminal, D2-small domain, of ClpB protein LI65_RS05905 SM00382 ATPases associated with a variety of cellular activities LI65_RS05905 SM00464 Found in ATP-dependent protease La (LON) LI65_RS05910 SM00411 bacterial (prokaryotic) histone like domain LI65_RS05920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI65_RS05950 SM00344 helix_turn_helix ASNC type LI65_RS05955 SM00382 ATPases associated with a variety of cellular activities LI65_RS05960 SM00382 ATPases associated with a variety of cellular activities LI65_RS05965 SM00938 Nitrogen regulatory protein P-II LI65_RS06000 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS06010 SM00354 helix_turn _helix lactose operon repressor LI65_RS06015 SM01038 Beta galactosidase small chain LI65_RS06030 SM00052 Putative diguanylate phosphodiesterase LI65_RS06050 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS06060 SM01266 LI65_RS06060 LI65_RS06135 SM00382 ATPases associated with a variety of cellular activities LI65_RS06160 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS06335 SM00857 Resolvase, N terminal domain LI65_RS06360 SM00382 ATPases associated with a variety of cellular activities LI65_RS06370 SM00493 LI65_RS06370 LI65_RS06375 SM00387 Histidine kinase-like ATPases LI65_RS06425 SM00422 helix_turn_helix, mercury resistance LI65_RS06435 SM00244 prohibitin homologues LI65_RS06445 SM00382 ATPases associated with a variety of cellular activities LI65_RS06460 SM00822 LI65_RS06460 LI65_RS06470 SM00382 ATPases associated with a variety of cellular activities LI65_RS06485 SM00450 Rhodanese Homology Domain LI65_RS06495 SM01001 AIR carboxylase LI65_RS06510 SM00840 LI65_RS06510 LI65_RS06520 SM00354 helix_turn _helix lactose operon repressor LI65_RS06570 SM00421 helix_turn_helix, Lux Regulon LI65_RS06570 SM00448 cheY-homologous receiver domain LI65_RS06580 SM00052 Putative diguanylate phosphodiesterase LI65_RS06620 SM00710 Parallel beta-helix repeats LI65_RS06690 SM00354 helix_turn _helix lactose operon repressor LI65_RS06705 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS06715 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS06735 SM00849 Metallo-beta-lactamase superfamily LI65_RS06740 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS06760 SM00831 Cation transporter/ATPase, N-terminus LI65_RS06785 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS06790 SM00382 ATPases associated with a variety of cellular activities LI65_RS06825 SM00382 ATPases associated with a variety of cellular activities LI65_RS06830 SM00382 ATPases associated with a variety of cellular activities LI65_RS06900 SM00382 ATPases associated with a variety of cellular activities LI65_RS06930 SM00923 MbtH-like protein LI65_RS06935 SM00823 Phosphopantetheine attachment site LI65_RS06935 SM00824 Thioesterase LI65_RS06940 SM00382 ATPases associated with a variety of cellular activities LI65_RS06980 SM00822 LI65_RS06980 LI65_RS07000 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS07010 SM00822 LI65_RS07010 LI65_RS07020 SM00382 ATPases associated with a variety of cellular activities LI65_RS07060 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS07070 SM00470 ParB-like nuclease domain LI65_RS07100 SM00829 Enoylreductase LI65_RS07110 SM00903 Flavin reductase like domain LI65_RS07115 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS07185 SM00357 Cold shock protein domain LI65_RS07205 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS07225 SM00936 Penicillin-binding protein 5, C-terminal domain LI65_RS07285 SM00382 ATPases associated with a variety of cellular activities LI65_RS07300 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS07310 SM00116 Domain in cystathionine beta-synthase and other proteins. LI65_RS07310 SM01091 Transporter associated domain LI65_RS07325 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS07420 SM00354 helix_turn _helix lactose operon repressor LI65_RS07475 SM00448 cheY-homologous receiver domain LI65_RS07475 SM00862 Transcriptional regulatory protein, C terminal LI65_RS07480 SM00387 Histidine kinase-like ATPases LI65_RS07480 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS07520 SM00796 Allophanate hydrolase subunit 1 LI65_RS07525 SM00797 Allophanate hydrolase subunit 2 LI65_RS07535 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LI65_RS07535 SM01232 LI65_RS07535 LI65_RS07565 SM00861 Transketolase, pyrimidine binding domain LI65_RS07580 SM00881 CoA binding domain LI65_RS07585 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS07585 SM00866 LI65_RS07585 LI65_RS07595 SM00872 Alpha mannosidase, middle domain LI65_RS07705 SM00855 Phosphoglycerate mutase family LI65_RS07730 SM00382 ATPases associated with a variety of cellular activities LI65_RS07755 SM00382 ATPases associated with a variety of cellular activities LI65_RS07785 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS07785 SM00866 LI65_RS07785 LI65_RS07810 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS07810 SM00876 Biotin and Thiamin Synthesis associated domain LI65_RS07830 SM00382 ATPases associated with a variety of cellular activities LI65_RS07835 SM00487 DEAD-like helicases superfamily LI65_RS07835 SM00490 helicase superfamily c-terminal domain LI65_RS07845 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS07850 SM00852 Probable molybdopterin binding domain LI65_RS07880 SM00155 Phospholipase D. Active site motifs. LI65_RS07905 SM00382 ATPases associated with a variety of cellular activities LI65_RS07920 SM00487 DEAD-like helicases superfamily LI65_RS07920 SM00490 helicase superfamily c-terminal domain LI65_RS07925 SM00487 DEAD-like helicases superfamily LI65_RS07925 SM00488 LI65_RS07925 LI65_RS07925 SM00491 LI65_RS07925 LI65_RS07990 SM00382 ATPases associated with a variety of cellular activities LI65_RS08000 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS08000 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI65_RS08030 SM00529 Helix-turn-helix diphteria tox regulatory element LI65_RS08075 SM00382 ATPases associated with a variety of cellular activities LI65_RS08090 SM00382 ATPases associated with a variety of cellular activities LI65_RS08110 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS08110 SM00866 LI65_RS08110 LI65_RS08120 SM00382 ATPases associated with a variety of cellular activities LI65_RS08135 SM00354 helix_turn _helix lactose operon repressor LI65_RS08170 SM00852 Probable molybdopterin binding domain LI65_RS08180 SM00382 ATPases associated with a variety of cellular activities LI65_RS08200 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS08220 SM00936 Penicillin-binding protein 5, C-terminal domain LI65_RS08225 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS08225 SM01134 LI65_RS08225 LI65_RS08230 SM00014 Acid phosphatase homologues LI65_RS08270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI65_RS08320 SM00382 ATPases associated with a variety of cellular activities LI65_RS08350 SM00448 cheY-homologous receiver domain LI65_RS08350 SM00862 Transcriptional regulatory protein, C terminal LI65_RS08355 SM00387 Histidine kinase-like ATPases LI65_RS08355 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS08360 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS08360 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI65_RS08375 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS08375 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI65_RS08380 SM00382 ATPases associated with a variety of cellular activities LI65_RS08395 SM00644 LI65_RS08395 LI65_RS08425 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins LI65_RS08425 SM00495 Chitin-binding domain type 3 LI65_RS08425 SM00636 LI65_RS08425 LI65_RS08435 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins LI65_RS08435 SM00495 Chitin-binding domain type 3 LI65_RS08495 SM00382 ATPases associated with a variety of cellular activities LI65_RS08500 SM00357 Cold shock protein domain LI65_RS08510 SM00382 ATPases associated with a variety of cellular activities LI65_RS08510 SM01086 C-terminal, D2-small domain, of ClpB protein LI65_RS08515 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS08525 SM00382 ATPases associated with a variety of cellular activities LI65_RS08530 SM00382 ATPases associated with a variety of cellular activities LI65_RS08540 SM00344 helix_turn_helix ASNC type LI65_RS08545 SM00843 LI65_RS08545 LI65_RS08555 SM00382 ATPases associated with a variety of cellular activities LI65_RS08565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS08630 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS08635 SM00411 bacterial (prokaryotic) histone like domain LI65_RS08640 SM00849 Metallo-beta-lactamase superfamily LI65_RS08645 SM00382 ATPases associated with a variety of cellular activities LI65_RS08710 SM00849 Metallo-beta-lactamase superfamily LI65_RS08800 SM00857 Resolvase, N terminal domain LI65_RS08835 SM00382 ATPases associated with a variety of cellular activities LI65_RS08850 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS08875 SM00981 LI65_RS08875 LI65_RS08880 SM00382 ATPases associated with a variety of cellular activities LI65_RS08950 SM00851 MGS-like domain LI65_RS08960 SM00881 CoA binding domain LI65_RS08965 SM00992 Hemimethylated DNA-binding protein YccV like LI65_RS08970 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LI65_RS09000 SM00382 ATPases associated with a variety of cellular activities LI65_RS09020 SM00421 helix_turn_helix, Lux Regulon LI65_RS09040 SM00822 LI65_RS09040 LI65_RS09085 SM00903 Flavin reductase like domain LI65_RS09225 SM00481 DNA polymerase alpha chain like domain LI65_RS09255 SM00421 helix_turn_helix, Lux Regulon LI65_RS09280 SM00506 Appr-1"-p processing enzyme LI65_RS09320 SM00450 Rhodanese Homology Domain LI65_RS09325 SM00867 YceI-like domain LI65_RS09400 SM00858 LI65_RS09400 LI65_RS09445 SM00047 Lysozyme subfamily 2 LI65_RS09470 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS09475 SM00363 S4 RNA-binding domain LI65_RS09505 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LI65_RS09510 SM00822 LI65_RS09510 LI65_RS09520 SM00825 Beta-ketoacyl synthase LI65_RS09610 SM00257 Lysin motif LI65_RS09615 SM00487 DEAD-like helicases superfamily LI65_RS09615 SM00490 helicase superfamily c-terminal domain LI65_RS09615 SM00982 LI65_RS09615 LI65_RS09615 SM01058 CarD-like/TRCF domain LI65_RS09630 SM00382 ATPases associated with a variety of cellular activities LI65_RS09665 SM00382 ATPases associated with a variety of cellular activities LI65_RS09680 SM01321 LI65_RS09680 LI65_RS09685 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LI65_RS09690 SM00387 Histidine kinase-like ATPases LI65_RS09690 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS09695 SM00448 cheY-homologous receiver domain LI65_RS09695 SM00862 Transcriptional regulatory protein, C terminal LI65_RS09730 SM01329 LI65_RS09730 LI65_RS09740 SM00052 Putative diguanylate phosphodiesterase LI65_RS09750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS09750 SM00267 diguanylate cyclase LI65_RS09780 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS09810 SM00763 PrkA AAA domain LI65_RS09825 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI65_RS09840 SM00636 LI65_RS09840 LI65_RS09850 SM00870 LI65_RS09850 LI65_RS09870 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LI65_RS09870 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LI65_RS09870 SM00493 LI65_RS09870 LI65_RS09905 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LI65_RS09930 SM00450 Rhodanese Homology Domain LI65_RS09935 SM00382 ATPases associated with a variety of cellular activities LI65_RS09995 SM00465 GIY-YIG type nucleases (URI domain) LI65_RS10025 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS10040 SM01060 LI65_RS10040 LI65_RS10100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LI65_RS10125 SM00873 B3/4 domain LI65_RS10125 SM00874 tRNA synthetase B5 domain LI65_RS10125 SM00896 Ferredoxin-fold anticodon binding domain LI65_RS10130 SM00411 bacterial (prokaryotic) histone like domain LI65_RS10290 SM00857 Resolvase, N terminal domain LI65_RS10320 SM00382 ATPases associated with a variety of cellular activities LI65_RS10340 SM00382 ATPases associated with a variety of cellular activities LI65_RS10390 SM01217 LI65_RS10390 LI65_RS10450 SM00421 helix_turn_helix, Lux Regulon LI65_RS10455 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS10475 SM00052 Putative diguanylate phosphodiesterase LI65_RS10475 SM01034 Sensors of blue-light using FAD LI65_RS10480 SM00422 helix_turn_helix, mercury resistance LI65_RS10505 SM00382 ATPases associated with a variety of cellular activities LI65_RS10525 SM00257 Lysin motif LI65_RS10545 SM00116 Domain in cystathionine beta-synthase and other proteins. LI65_RS10550 SM00382 ATPases associated with a variety of cellular activities LI65_RS10550 SM00930 LI65_RS10550 LI65_RS10580 SM00382 ATPases associated with a variety of cellular activities LI65_RS10585 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS10585 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI65_RS10605 SM00849 Metallo-beta-lactamase superfamily LI65_RS10610 SM00947 Carbonic anhydrase LI65_RS10665 SM00354 helix_turn _helix lactose operon repressor LI65_RS10695 SM00479 LI65_RS10695 LI65_RS10750 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS10755 SM00267 diguanylate cyclase LI65_RS10780 SM00363 S4 RNA-binding domain LI65_RS10800 SM00478 endonuclease III LI65_RS10800 SM00525 LI65_RS10800 LI65_RS10810 SM00900 LI65_RS10810 LI65_RS10870 SM00354 helix_turn _helix lactose operon repressor LI65_RS10900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS10900 SM00387 Histidine kinase-like ATPases LI65_RS10900 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS10910 SM00357 Cold shock protein domain LI65_RS10920 SM00448 cheY-homologous receiver domain LI65_RS10920 SM00862 Transcriptional regulatory protein, C terminal LI65_RS10945 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LI65_RS10945 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LI65_RS10965 SM00100 Cyclic nucleotide-monophosphate binding domain LI65_RS10965 SM00419 helix_turn_helix, cAMP Regulatory protein LI65_RS10995 SM00463 Small MutS-related domain LI65_RS11000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS11000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS11000 SM00319 Homologues of the ligand binding domain of Tar LI65_RS11020 SM00564 beta-propeller repeat LI65_RS11030 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS11060 SM00507 HNH nucleases LI65_RS11130 SM00116 Domain in cystathionine beta-synthase and other proteins. LI65_RS11130 SM00382 ATPases associated with a variety of cellular activities LI65_RS11170 SM01059 Chloramphenicol acetyltransferase LI65_RS11235 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS11275 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS11275 SM00895 LI65_RS11275 LI65_RS11335 SM00564 beta-propeller repeat LI65_RS11370 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS11380 SM00267 diguanylate cyclase LI65_RS11385 SM00849 Metallo-beta-lactamase superfamily LI65_RS11470 SM00849 Metallo-beta-lactamase superfamily LI65_RS11565 SM00382 ATPases associated with a variety of cellular activities LI65_RS11565 SM00487 DEAD-like helicases superfamily LI65_RS11565 SM00490 helicase superfamily c-terminal domain LI65_RS11565 SM00847 Helicase associated domain (HA2) Add an annotation LI65_RS11605 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS11605 SM01134 LI65_RS11605 LI65_RS11620 SM00382 ATPases associated with a variety of cellular activities LI65_RS11635 SM00052 Putative diguanylate phosphodiesterase LI65_RS11675 SM00829 Enoylreductase LI65_RS11680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS11680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS11680 SM00319 Homologues of the ligand binding domain of Tar LI65_RS11690 SM01150 LI65_RS11690 LI65_RS11710 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS11760 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS11770 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS11790 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS11795 SM00450 Rhodanese Homology Domain LI65_RS11825 SM00382 ATPases associated with a variety of cellular activities LI65_RS11850 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS11855 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS11890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS11890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS11905 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS11905 SM00267 diguanylate cyclase LI65_RS11955 SM00448 cheY-homologous receiver domain LI65_RS11955 SM00862 Transcriptional regulatory protein, C terminal LI65_RS11960 SM00387 Histidine kinase-like ATPases LI65_RS11960 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS11980 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS11980 SM01134 LI65_RS11980 LI65_RS11985 SM00710 Parallel beta-helix repeats LI65_RS12035 SM00642 Alpha-amylase domain LI65_RS12040 SM00642 Alpha-amylase domain LI65_RS12045 SM00642 Alpha-amylase domain LI65_RS12060 SM00849 Metallo-beta-lactamase superfamily LI65_RS12115 SM00507 HNH nucleases LI65_RS12130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS12130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS12135 SM00354 helix_turn _helix lactose operon repressor LI65_RS12140 SM00640 Glycosyl hydrolases family 32 LI65_RS12160 SM00052 Putative diguanylate phosphodiesterase LI65_RS12160 SM01034 Sensors of blue-light using FAD LI65_RS12195 SM00382 ATPases associated with a variety of cellular activities LI65_RS12200 SM00382 ATPases associated with a variety of cellular activities LI65_RS12215 SM00849 Metallo-beta-lactamase superfamily LI65_RS12235 SM00919 Malic enzyme, NAD binding domain LI65_RS12235 SM01274 LI65_RS12235 LI65_RS12240 SM00382 ATPases associated with a variety of cellular activities LI65_RS12245 SM00829 Enoylreductase LI65_RS12290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS12320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS12345 SM00903 Flavin reductase like domain LI65_RS12355 SM00838 Elongation factor G C-terminus LI65_RS12355 SM00889 Elongation factor G, domain IV LI65_RS12360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LI65_RS12385 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS12390 SM00382 ATPases associated with a variety of cellular activities LI65_RS12405 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS12455 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS12455 SM00895 LI65_RS12455 LI65_RS12460 SM00829 Enoylreductase LI65_RS12465 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS12535 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS12570 SM00890 Domain of unknown function LI65_RS12595 SM00487 DEAD-like helicases superfamily LI65_RS12595 SM00490 helicase superfamily c-terminal domain LI65_RS12605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS12635 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS12645 SM00091 PAS domain LI65_RS12645 SM00382 ATPases associated with a variety of cellular activities LI65_RS12660 SM00354 helix_turn _helix lactose operon repressor LI65_RS12670 SM00382 ATPases associated with a variety of cellular activities LI65_RS12715 SM00642 Alpha-amylase domain LI65_RS12740 SM00382 ATPases associated with a variety of cellular activities LI65_RS12760 SM00382 ATPases associated with a variety of cellular activities LI65_RS12765 SM00382 ATPases associated with a variety of cellular activities LI65_RS12780 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS12785 SM00267 diguanylate cyclase LI65_RS12800 SM00357 Cold shock protein domain LI65_RS12800 SM00955 LI65_RS12800 LI65_RS12805 SM00052 Putative diguanylate phosphodiesterase LI65_RS12805 SM00091 PAS domain LI65_RS12805 SM00267 diguanylate cyclase LI65_RS12820 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS12820 SM01134 LI65_RS12820 LI65_RS12835 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI65_RS12840 SM00028 Tetratricopeptide repeats LI65_RS12850 SM00014 Acid phosphatase homologues LI65_RS12885 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LI65_RS12885 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LI65_RS12885 SM00493 LI65_RS12885 LI65_RS12900 SM00822 LI65_RS12900 LI65_RS12910 SM00363 S4 RNA-binding domain LI65_RS12920 SM00481 DNA polymerase alpha chain like domain LI65_RS13010 SM00155 Phospholipase D. Active site motifs. LI65_RS13025 SM00382 ATPases associated with a variety of cellular activities LI65_RS13030 SM00382 ATPases associated with a variety of cellular activities LI65_RS13070 SM00528 Domain in histone-like proteins of HNS family LI65_RS13080 SM00448 cheY-homologous receiver domain LI65_RS13125 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS13135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS13135 SM00387 Histidine kinase-like ATPases LI65_RS13140 SM00421 helix_turn_helix, Lux Regulon LI65_RS13140 SM00448 cheY-homologous receiver domain LI65_RS13150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS13160 SM00382 ATPases associated with a variety of cellular activities LI65_RS13175 SM01012 LI65_RS13175 LI65_RS13185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS13185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS13230 SM00937 LI65_RS13230 LI65_RS13250 SM01400 LI65_RS13250 LI65_RS13260 SM00422 helix_turn_helix, mercury resistance LI65_RS13300 SM00506 Appr-1"-p processing enzyme LI65_RS13340 SM00382 ATPases associated with a variety of cellular activities LI65_RS13340 SM01086 C-terminal, D2-small domain, of ClpB protein LI65_RS13370 SM00331 Sigma factor PP2C-like phosphatases LI65_RS13370 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain LI65_RS13455 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS13460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI65_RS13495 SM01091 Transporter associated domain LI65_RS13500 SM01005 Alanine racemase, C-terminal domain LI65_RS13520 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS13565 SM00341 Helicase and RNase D C-terminal LI65_RS13565 SM00474 3'-5' exonuclease LI65_RS13585 SM00487 DEAD-like helicases superfamily LI65_RS13585 SM00491 LI65_RS13585 LI65_RS13615 SM00052 Putative diguanylate phosphodiesterase LI65_RS13620 SM01091 Transporter associated domain LI65_RS13660 SM00357 Cold shock protein domain LI65_RS13685 SM00346 helix_turn_helix isocitrate lyase regulation LI65_RS13700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI65_RS13700 SM00245 tail specific protease LI65_RS13705 SM00945 ProQ/FINO family LI65_RS13710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS13825 SM00479 LI65_RS13825 LI65_RS13875 SM00257 Lysin motif LI65_RS13885 SM00382 ATPases associated with a variety of cellular activities LI65_RS13895 SM00382 ATPases associated with a variety of cellular activities LI65_RS13900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI65_RS13960 SM00836 DALR anticodon binding domain LI65_RS13960 SM01016 Arginyl tRNA synthetase N terminal dom LI65_RS13995 SM00448 cheY-homologous receiver domain LI65_RS14000 SM00448 cheY-homologous receiver domain LI65_RS14005 SM00138 Methyltransferase, chemotaxis proteins LI65_RS14010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS14010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS14010 SM00319 Homologues of the ligand binding domain of Tar LI65_RS14015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS14015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS14015 SM00319 Homologues of the ligand binding domain of Tar LI65_RS14020 SM00972 Spore Coat Protein U domain LI65_RS14035 SM00972 Spore Coat Protein U domain LI65_RS14040 SM00972 Spore Coat Protein U domain LI65_RS14050 SM00260 Two component signalling adaptor domain LI65_RS14055 SM00073 Histidine Phosphotransfer domain LI65_RS14055 SM00260 Two component signalling adaptor domain LI65_RS14055 SM00387 Histidine kinase-like ATPases LI65_RS14055 SM01231 LI65_RS14055 LI65_RS14100 SM00382 ATPases associated with a variety of cellular activities LI65_RS14180 SM00382 ATPases associated with a variety of cellular activities LI65_RS14185 SM00382 ATPases associated with a variety of cellular activities LI65_RS14220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI65_RS14220 SM00465 GIY-YIG type nucleases (URI domain) LI65_RS14225 SM00421 helix_turn_helix, Lux Regulon LI65_RS14225 SM00448 cheY-homologous receiver domain LI65_RS14235 SM00421 helix_turn_helix, Lux Regulon LI65_RS14240 SM00382 ATPases associated with a variety of cellular activities LI65_RS14255 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS14255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LI65_RS14290 SM00642 Alpha-amylase domain LI65_RS14320 SM00382 ATPases associated with a variety of cellular activities LI65_RS14370 SM00421 helix_turn_helix, Lux Regulon LI65_RS14390 SM00267 diguanylate cyclase LI65_RS14420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS14435 SM00387 Histidine kinase-like ATPases LI65_RS14440 SM00448 cheY-homologous receiver domain LI65_RS14450 SM00900 LI65_RS14450 LI65_RS14505 SM01006 Siderophore biosynthesis protein domain LI65_RS14580 SM00831 Cation transporter/ATPase, N-terminus LI65_RS14645 SM00871 Bacterial transcription activator, effector binding domain LI65_RS14650 SM00936 Penicillin-binding protein 5, C-terminal domain LI65_RS14655 SM00479 LI65_RS14655 LI65_RS14725 SM00984 UDP binding domain LI65_RS14730 SM01350 LI65_RS14730 LI65_RS14880 SM00226 Low molecular weight phosphatase family LI65_RS14890 SM01091 Transporter associated domain LI65_RS14910 SM00052 Putative diguanylate phosphodiesterase LI65_RS14910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LI65_RS14910 SM00091 PAS domain LI65_RS14910 SM00267 diguanylate cyclase LI65_RS14915 SM00478 endonuclease III LI65_RS14915 SM01009 AlkA N-terminal domain LI65_RS14945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS14945 SM00387 Histidine kinase-like ATPases LI65_RS14945 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS14950 SM00448 cheY-homologous receiver domain LI65_RS14950 SM00862 Transcriptional regulatory protein, C terminal LI65_RS14960 SM00046 Diacylglycerol kinase catalytic domain (presumed) LI65_RS14965 SM00382 ATPases associated with a variety of cellular activities LI65_RS14970 SM00382 ATPases associated with a variety of cellular activities LI65_RS14990 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS15020 SM00354 helix_turn _helix lactose operon repressor LI65_RS15040 SM01133 LI65_RS15040 LI65_RS15060 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS15060 SM00866 LI65_RS15060 LI65_RS15105 SM00226 Low molecular weight phosphatase family LI65_RS15140 SM00448 cheY-homologous receiver domain LI65_RS15140 SM00850 LytTr DNA-binding domain LI65_RS15145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS15145 SM00387 Histidine kinase-like ATPases LI65_RS15150 SM00422 helix_turn_helix, mercury resistance LI65_RS15160 SM00382 ATPases associated with a variety of cellular activities LI65_RS15175 SM01217 LI65_RS15175 LI65_RS15245 SM00382 ATPases associated with a variety of cellular activities LI65_RS15255 SM00354 helix_turn _helix lactose operon repressor LI65_RS15300 SM00518 AP endonuclease family 2 LI65_RS15330 SM00841 Elongation factor P, C-terminal LI65_RS15330 SM01185 LI65_RS15330 LI65_RS15345 SM00833 Cobalamin synthesis protein cobW C-terminal domain LI65_RS15350 SM00014 Acid phosphatase homologues LI65_RS15360 SM00052 Putative diguanylate phosphodiesterase LI65_RS15380 SM00382 ATPases associated with a variety of cellular activities LI65_RS15395 SM00363 S4 RNA-binding domain LI65_RS15400 SM00487 DEAD-like helicases superfamily LI65_RS15400 SM00490 helicase superfamily c-terminal domain LI65_RS15450 SM00924 MgtE intracellular N domain LI65_RS15455 SM00382 ATPases associated with a variety of cellular activities LI65_RS15465 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS15480 SM00387 Histidine kinase-like ATPases LI65_RS15485 SM00421 helix_turn_helix, Lux Regulon LI65_RS15485 SM00448 cheY-homologous receiver domain LI65_RS15490 SM00387 Histidine kinase-like ATPases LI65_RS15490 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS15490 SM00448 cheY-homologous receiver domain LI65_RS15495 SM00434 DNA Topoisomerase IV LI65_RS15545 SM00852 Probable molybdopterin binding domain LI65_RS15555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS15555 SM00387 Histidine kinase-like ATPases LI65_RS15555 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS15560 SM00448 cheY-homologous receiver domain LI65_RS15560 SM00862 Transcriptional regulatory protein, C terminal LI65_RS15585 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS15620 SM00849 Metallo-beta-lactamase superfamily LI65_RS15625 SM00260 Two component signalling adaptor domain LI65_RS15625 SM00448 cheY-homologous receiver domain LI65_RS15665 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS15665 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LI65_RS15670 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LI65_RS15705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS15740 SM00861 Transketolase, pyrimidine binding domain LI65_RS15765 SM00354 helix_turn _helix lactose operon repressor LI65_RS15790 SM00905 Dihydroneopterin aldolase LI65_RS15805 SM00382 ATPases associated with a variety of cellular activities LI65_RS15820 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS15825 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS15870 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI65_RS15890 SM00825 Beta-ketoacyl synthase LI65_RS15930 SM00463 Small MutS-related domain LI65_RS15975 SM00267 diguanylate cyclase LI65_RS15995 SM00387 Histidine kinase-like ATPases LI65_RS16000 SM00448 cheY-homologous receiver domain LI65_RS16000 SM00850 LytTr DNA-binding domain LI65_RS16040 SM00052 Putative diguanylate phosphodiesterase LI65_RS16040 SM00267 diguanylate cyclase LI65_RS16115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LI65_RS16115 SM00292 breast cancer carboxy-terminal domain LI65_RS16115 SM00532 Ligase N family LI65_RS16120 SM00771 ZipA, C-terminal domain (FtsZ-binding) LI65_RS16160 SM00382 ATPases associated with a variety of cellular activities LI65_RS16200 SM00646 LI65_RS16200 LI65_RS16210 SM00919 Malic enzyme, NAD binding domain LI65_RS16210 SM01274 LI65_RS16210 LI65_RS16220 SM00861 Transketolase, pyrimidine binding domain LI65_RS16230 SM00354 helix_turn _helix lactose operon repressor LI65_RS16235 SM01038 Beta galactosidase small chain LI65_RS16280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS16280 SM00387 Histidine kinase-like ATPases LI65_RS16330 SM01130 LI65_RS16330 LI65_RS16420 SM00052 Putative diguanylate phosphodiesterase LI65_RS16420 SM00267 diguanylate cyclase LI65_RS16440 SM00448 cheY-homologous receiver domain LI65_RS16440 SM00862 Transcriptional regulatory protein, C terminal LI65_RS16445 SM00387 Histidine kinase-like ATPases LI65_RS16445 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS16465 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS16475 SM00116 Domain in cystathionine beta-synthase and other proteins. LI65_RS16475 SM01240 LI65_RS16475 LI65_RS16515 SM00564 beta-propeller repeat LI65_RS16535 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS16545 SM00562 LI65_RS16545 LI65_RS16565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS16575 SM01359 LI65_RS16575 LI65_RS16575 SM01360 LI65_RS16575 LI65_RS16590 SM00450 Rhodanese Homology Domain LI65_RS16625 SM00271 DnaJ molecular chaperone homology domain LI65_RS16700 SM00938 Nitrogen regulatory protein P-II LI65_RS16705 SM00382 ATPases associated with a variety of cellular activities LI65_RS16705 SM00448 cheY-homologous receiver domain LI65_RS16715 SM00387 Histidine kinase-like ATPases LI65_RS16715 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS16720 SM01211 LI65_RS16720 LI65_RS16725 SM00062 Bacterial periplasmic substrate-binding proteins LI65_RS16780 SM00358 Double-stranded RNA binding motif LI65_RS16780 SM00535 Ribonuclease III family LI65_RS16870 SM00409 Immunoglobulin LI65_RS17075 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS17165 SM00487 DEAD-like helicases superfamily LI65_RS17165 SM00490 helicase superfamily c-terminal domain LI65_RS17175 SM00986 Uracil DNA glycosylase superfamily LI65_RS17175 SM00987 UreE urease accessory protein, C-terminal domain LI65_RS17180 SM00967 RNA 2'-O ribose methyltransferase substrate binding LI65_RS17190 SM01144 LI65_RS17190 LI65_RS17195 SM00881 CoA binding domain LI65_RS17200 SM00155 Phospholipase D. Active site motifs. LI65_RS17240 SM00382 ATPases associated with a variety of cellular activities LI65_RS17240 SM01086 C-terminal, D2-small domain, of ClpB protein LI65_RS17250 SM00363 S4 RNA-binding domain LI65_RS17265 SM00830 Chorismate mutase type II LI65_RS17275 SM00830 Chorismate mutase type II LI65_RS17295 SM00267 diguanylate cyclase LI65_RS17335 SM00382 ATPases associated with a variety of cellular activities LI65_RS17335 SM00962 SRP54-type protein, GTPase domain LI65_RS17335 SM00963 SRP54-type protein, helical bundle domain LI65_RS17345 SM01091 Transporter associated domain LI65_RS17420 SM00382 ATPases associated with a variety of cellular activities LI65_RS17540 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS17565 SM00382 ATPases associated with a variety of cellular activities LI65_RS17570 SM00260 Two component signalling adaptor domain LI65_RS17575 SM00073 Histidine Phosphotransfer domain LI65_RS17575 SM00260 Two component signalling adaptor domain LI65_RS17575 SM00387 Histidine kinase-like ATPases LI65_RS17575 SM01231 LI65_RS17575 LI65_RS17605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS17605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS17620 SM00047 Lysozyme subfamily 2 LI65_RS17665 SM00858 LI65_RS17665 LI65_RS17755 SM00382 ATPases associated with a variety of cellular activities LI65_RS17780 SM00138 Methyltransferase, chemotaxis proteins LI65_RS17785 SM00448 cheY-homologous receiver domain LI65_RS17790 SM00448 cheY-homologous receiver domain LI65_RS17835 SM00354 helix_turn _helix lactose operon repressor LI65_RS17880 SM00382 ATPases associated with a variety of cellular activities LI65_RS17895 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS17945 SM00248 ankyrin repeats LI65_RS17965 SM00528 Domain in histone-like proteins of HNS family LI65_RS18005 SM00382 ATPases associated with a variety of cellular activities LI65_RS18025 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS18040 SM00917 LeuA allosteric (dimerisation) domain LI65_RS18045 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS18100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LI65_RS18110 SM00382 ATPases associated with a variety of cellular activities LI65_RS18130 SM00382 ATPases associated with a variety of cellular activities LI65_RS18165 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS18165 SM01134 LI65_RS18165 LI65_RS18175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS18175 SM00382 ATPases associated with a variety of cellular activities LI65_RS18180 SM00849 Metallo-beta-lactamase superfamily LI65_RS18205 SM00354 helix_turn _helix lactose operon repressor LI65_RS18290 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS18290 SM00382 ATPases associated with a variety of cellular activities LI65_RS18305 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LI65_RS18305 SM00534 ATPase domain of DNA mismatch repair MUTS family LI65_RS18325 SM00347 helix_turn_helix multiple antibiotic resistance protein LI65_RS18350 SM00257 Lysin motif LI65_RS18435 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS18470 SM01192 LI65_RS18470 LI65_RS18470 SM01193 LI65_RS18470 LI65_RS18485 SM00954 Region found in RelA / SpoT proteins LI65_RS18495 SM00073 Histidine Phosphotransfer domain LI65_RS18495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS18495 SM00387 Histidine kinase-like ATPases LI65_RS18495 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS18495 SM00448 cheY-homologous receiver domain LI65_RS18505 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS18510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LI65_RS18565 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LI65_RS18565 SM00475 5'-3' exonuclease LI65_RS18605 SM00925 MltA specific insert domain LI65_RS18625 SM00646 LI65_RS18625 LI65_RS18685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LI65_RS18695 SM00927 DNA mismatch repair enzyme MutH LI65_RS18715 SM00563 Phosphate acyltransferases LI65_RS18720 SM00354 helix_turn _helix lactose operon repressor LI65_RS18730 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS18730 SM00895 LI65_RS18730 LI65_RS18745 SM00354 helix_turn _helix lactose operon repressor LI65_RS18785 SM00382 ATPases associated with a variety of cellular activities LI65_RS18880 SM00642 Alpha-amylase domain LI65_RS18885 SM00822 LI65_RS18885 LI65_RS18915 SM00849 Metallo-beta-lactamase superfamily LI65_RS18960 SM00257 Lysin motif LI65_RS18975 SM00937 LI65_RS18975 LI65_RS19085 SM01011 Aminopeptidase P, N-terminal domain LI65_RS19150 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LI65_RS19155 SM00861 Transketolase, pyrimidine binding domain LI65_RS19215 SM00346 helix_turn_helix isocitrate lyase regulation LI65_RS19270 SM00731 SprT homologues. LI65_RS19295 SM00732 Likely ribonuclease with RNase H fold. LI65_RS19315 SM01152 LI65_RS19315 LI65_RS19325 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS19350 SM00478 endonuclease III LI65_RS19350 SM00525 LI65_RS19350 LI65_RS19395 SM00764 Citrate lyase ligase C-terminal domain LI65_RS19410 SM00091 PAS domain LI65_RS19410 SM00387 Histidine kinase-like ATPases LI65_RS19415 SM00448 cheY-homologous receiver domain LI65_RS19435 SM00387 Histidine kinase-like ATPases LI65_RS19435 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS19435 SM00448 cheY-homologous receiver domain LI65_RS19440 SM00421 helix_turn_helix, Lux Regulon LI65_RS19440 SM00448 cheY-homologous receiver domain LI65_RS19450 SM00869 Autotransporter beta-domain LI65_RS19490 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS19490 SM01134 LI65_RS19490 LI65_RS19495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS19495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS19545 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS19560 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS19570 SM00563 Phosphate acyltransferases LI65_RS19575 SM00434 DNA Topoisomerase IV LI65_RS19585 SM00448 cheY-homologous receiver domain LI65_RS19585 SM00862 Transcriptional regulatory protein, C terminal LI65_RS19590 SM00387 Histidine kinase-like ATPases LI65_RS19590 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS19605 SM00257 Lysin motif LI65_RS19605 SM00749 bacterial OsmY and nodulation domain LI65_RS19625 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS19650 SM00382 ATPases associated with a variety of cellular activities LI65_RS19660 SM00387 Histidine kinase-like ATPases LI65_RS19660 SM00433 TopoisomeraseII LI65_RS19750 SM01118 LI65_RS19750 LI65_RS19755 SM00287 Bacterial SH3 domain homologues LI65_RS19760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LI65_RS19770 SM00905 Dihydroneopterin aldolase LI65_RS19775 SM01207 LI65_RS19775 LI65_RS19805 SM00988 UreE urease accessory protein, N-terminal domain LI65_RS19835 SM00400 zinc finger LI65_RS19835 SM00493 LI65_RS19835 LI65_RS19835 SM00766 DNA primase DnaG DnaB-binding LI65_RS19845 SM00986 Uracil DNA glycosylase superfamily LI65_RS19845 SM00987 UreE urease accessory protein, C-terminal domain LI65_RS19920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS19920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS19925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LI65_RS19925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LI65_RS19975 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS19980 SM00873 B3/4 domain LI65_RS19990 SM01133 LI65_RS19990 LI65_RS20010 SM00382 ATPases associated with a variety of cellular activities LI65_RS20055 SM00858 LI65_RS20055 LI65_RS20070 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS20070 SM00895 LI65_RS20070 LI65_RS20180 SM00858 LI65_RS20180 LI65_RS20185 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS20185 SM01134 LI65_RS20185 LI65_RS20265 SM00749 bacterial OsmY and nodulation domain LI65_RS20325 SM00487 DEAD-like helicases superfamily LI65_RS20325 SM00490 helicase superfamily c-terminal domain LI65_RS20330 SM00028 Tetratricopeptide repeats LI65_RS20335 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS20335 SM00322 K homology RNA-binding domain LI65_RS20340 SM01387 LI65_RS20340 LI65_RS20360 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS20400 SM00382 ATPases associated with a variety of cellular activities LI65_RS20410 SM01103 LI65_RS20410 LI65_RS20425 SM00448 cheY-homologous receiver domain LI65_RS20425 SM00862 Transcriptional regulatory protein, C terminal LI65_RS20430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS20430 SM00387 Histidine kinase-like ATPases LI65_RS20430 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS20495 SM00382 ATPases associated with a variety of cellular activities LI65_RS20525 SM00382 ATPases associated with a variety of cellular activities LI65_RS20565 SM00073 Histidine Phosphotransfer domain LI65_RS20565 SM00091 PAS domain LI65_RS20565 SM00387 Histidine kinase-like ATPases LI65_RS20565 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS20565 SM00448 cheY-homologous receiver domain LI65_RS20600 SM00829 Enoylreductase LI65_RS20605 SM01120 LI65_RS20605 LI65_RS20615 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS20655 SM01130 LI65_RS20655 LI65_RS20660 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS20660 SM00895 LI65_RS20660 LI65_RS20700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI65_RS20705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LI65_RS20765 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS20790 SM00052 Putative diguanylate phosphodiesterase LI65_RS20790 SM00267 diguanylate cyclase LI65_RS20795 SM00829 Enoylreductase LI65_RS20820 SM00878 Biotin carboxylase C-terminal domain LI65_RS20840 SM01057 Eukaryotic-type carbonic anhydrase LI65_RS20860 SM00052 Putative diguanylate phosphodiesterase LI65_RS20860 SM00267 diguanylate cyclase LI65_RS20980 SM00422 helix_turn_helix, mercury resistance LI65_RS20995 SM00662 RNA polymerases D LI65_RS21000 SM00363 S4 RNA-binding domain LI65_RS21000 SM01390 LI65_RS21000 LI65_RS21065 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LI65_RS21070 SM01374 LI65_RS21070 LI65_RS21090 SM00322 K homology RNA-binding domain LI65_RS21105 SM01382 LI65_RS21105 LI65_RS21105 SM01383 LI65_RS21105 LI65_RS21125 SM01403 LI65_RS21125 LI65_RS21150 SM00838 Elongation factor G C-terminus LI65_RS21150 SM00889 Elongation factor G, domain IV LI65_RS21215 SM00382 ATPases associated with a variety of cellular activities LI65_RS21225 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LI65_RS21290 SM00100 Cyclic nucleotide-monophosphate binding domain LI65_RS21290 SM00419 helix_turn_helix, cAMP Regulatory protein LI65_RS21385 SM00965 Secretin and TonB N terminus short domain LI65_RS21435 SM00363 S4 RNA-binding domain LI65_RS21450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS21450 SM00387 Histidine kinase-like ATPases LI65_RS21450 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS21455 SM00448 cheY-homologous receiver domain LI65_RS21455 SM00862 Transcriptional regulatory protein, C terminal LI65_RS21465 SM00316 Ribosomal protein S1-like RNA-binding domain LI65_RS21465 SM00732 Likely ribonuclease with RNase H fold. LI65_RS21470 SM00899 LI65_RS21470 LI65_RS21515 SM00421 helix_turn_helix, Lux Regulon LI65_RS21520 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS21520 SM01134 LI65_RS21520 LI65_RS21530 SM00450 Rhodanese Homology Domain LI65_RS21560 SM00642 Alpha-amylase domain LI65_RS21565 SM00642 Alpha-amylase domain LI65_RS21570 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI65_RS21595 SM00354 helix_turn _helix lactose operon repressor LI65_RS21630 SM00382 ATPases associated with a variety of cellular activities LI65_RS21650 SM00382 ATPases associated with a variety of cellular activities LI65_RS21655 SM00382 ATPases associated with a variety of cellular activities LI65_RS21710 SM00382 ATPases associated with a variety of cellular activities LI65_RS21715 SM00382 ATPases associated with a variety of cellular activities LI65_RS21715 SM00962 SRP54-type protein, GTPase domain LI65_RS21715 SM00963 SRP54-type protein, helical bundle domain LI65_RS21785 SM00563 Phosphate acyltransferases LI65_RS21840 SM00825 Beta-ketoacyl synthase LI65_RS21850 SM00822 LI65_RS21850 LI65_RS21855 SM00825 Beta-ketoacyl synthase LI65_RS21990 SM00421 helix_turn_helix, Lux Regulon LI65_RS21995 SM00822 LI65_RS21995 LI65_RS22020 SM00052 Putative diguanylate phosphodiesterase LI65_RS22040 SM00052 Putative diguanylate phosphodiesterase LI65_RS22040 SM00267 diguanylate cyclase LI65_RS22045 SM00028 Tetratricopeptide repeats LI65_RS22195 SM00382 ATPases associated with a variety of cellular activities LI65_RS22205 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS22210 SM00047 Lysozyme subfamily 2 LI65_RS22215 SM00642 Alpha-amylase domain LI65_RS22230 SM00346 helix_turn_helix isocitrate lyase regulation LI65_RS22260 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LI65_RS22270 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS22275 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS22360 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS22360 SM00895 LI65_RS22360 LI65_RS22415 SM00382 ATPases associated with a variety of cellular activities LI65_RS22510 SM00859 Semialdehyde dehydrogenase, NAD binding domain LI65_RS22565 SM00487 DEAD-like helicases superfamily LI65_RS22565 SM00490 helicase superfamily c-terminal domain LI65_RS22570 SM00354 helix_turn _helix lactose operon repressor LI65_RS22585 SM00382 ATPases associated with a variety of cellular activities LI65_RS22585 SM01086 C-terminal, D2-small domain, of ClpB protein LI65_RS22675 SM00448 cheY-homologous receiver domain LI65_RS22675 SM00862 Transcriptional regulatory protein, C terminal LI65_RS22680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LI65_RS22680 SM00387 Histidine kinase-like ATPases LI65_RS22680 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS22705 SM00342 helix_turn_helix, arabinose operon control protein LI65_RS22725 SM01007 Class II Aldolase and Adducin N-terminal domain LI65_RS22735 SM00382 ATPases associated with a variety of cellular activities LI65_RS22770 SM00354 helix_turn _helix lactose operon repressor LI65_RS22775 SM00530 Helix-turn-helix XRE-family like proteins LI65_RS22820 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LI65_RS22880 SM00420 helix_turn_helix, Deoxyribose operon repressor LI65_RS22880 SM01134 LI65_RS22880 LI65_RS22895 SM01133 LI65_RS22895 LI65_RS22930 SM01230 LI65_RS22930 LI65_RS22935 SM00091 PAS domain LI65_RS22935 SM00387 Histidine kinase-like ATPases LI65_RS22935 SM00388 His Kinase A (phosphoacceptor) domain LI65_RS22940 SM00382 ATPases associated with a variety of cellular activities LI65_RS22940 SM00448 cheY-homologous receiver domain LI65_RS22950 SM00729 Elongator protein 3, MiaB family, Radical SAM LI65_RS22965 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LI65_RS22965 SM00474 3'-5' exonuclease LI65_RS22965 SM00475 5'-3' exonuclease LI65_RS22965 SM00482 DNA polymerase A domain LI65_RS22970 SM00563 Phosphate acyltransferases LI65_RS23020 SM00345 helix_turn_helix gluconate operon transcriptional repressor LI65_RS23020 SM00895 LI65_RS23020 LI65_RS23030 SM00354 helix_turn _helix lactose operon repressor LI65_RS23050 SM00382 ATPases associated with a variety of cellular activities LI65_RS23065 SM00382 ATPases associated with a variety of cellular activities LI65_RS23070 SM00327 von Willebrand factor (vWF) type A domain LI65_RS23080 SM00344 helix_turn_helix ASNC type LI65_RS23090 SM01228 LI65_RS23090 LI65_RS23135 SM00382 ATPases associated with a variety of cellular activities LI65_RS23170 SM00382 ATPases associated with a variety of cellular activities LI65_RS23270 SM00433 TopoisomeraseII LI65_RS23285 SM00829 Enoylreductase LI65_RS24230 SM00382 ATPases associated with a variety of cellular activities LI65_RS25130 SM00421 helix_turn_helix, Lux Regulon