locus-tag	class	description
JLF42_RS00010	COG0592	DNA-directed DNA polymerase activity
JLF42_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JLF42_RS00025	COG0583	DNA-binding transcription factor activity
JLF42_RS00030	COG3321	synthase
JLF42_RS00030	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS00030	COG0604	alcohol dehydrogenase
JLF42_RS00035	COG0561	phosphatase activity
JLF42_RS00040	COG0823	Involved in the tonB-independent uptake of proteins
JLF42_RS00045	COG5645	(Lipo)protein
JLF42_RS00055	COG0071	Belongs to the small heat shock protein (HSP20) family
JLF42_RS00060	COG2985	domain, Protein
JLF42_RS00065	COG2188	Transcriptional regulator
JLF42_RS00080	COG2149	membrane
JLF42_RS00095	COG2610	gluconate transmembrane transporter activity
JLF42_RS00100	COG0583	DNA-binding transcription factor activity
JLF42_RS00110	COG2814	Major facilitator Superfamily
JLF42_RS00135	COG0028	Belongs to the TPP enzyme family
JLF42_RS00140	COG0440	acetolactate synthase activity
JLF42_RS00145	COG2197	response regulator
JLF42_RS00155	COG2271	Major facilitator Superfamily
JLF42_RS00175	COG0697	spore germination
JLF42_RS00180	COG4580	involved in the transport of maltose and maltodextrins
JLF42_RS00185	COG1447	Phosphotransferase system cellobiose-specific component IIA
JLF42_RS00190	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS00195	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS00195	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS00205	COG1609	Transcriptional regulator
JLF42_RS00215	COG0454	-acetyltransferase
JLF42_RS00225	COG1487	ribonuclease activity
JLF42_RS00230	COG1464	Belongs to the NlpA lipoprotein family
JLF42_RS00235	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JLF42_RS00275	COG3210	domain, Protein
JLF42_RS00295	COG3210	domain, Protein
JLF42_RS00420	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JLF42_RS00425	COG3272	Protein of unknown function (DUF1722)
JLF42_RS00435	COG0789	Transcriptional regulator
JLF42_RS00450	COG0519	Catalyzes the synthesis of GMP from XMP
JLF42_RS00510	COG2826	transposase and inactivated derivatives, IS30 family
JLF42_RS00530	COG3547	Transposase (IS116 IS110 IS902 family)
JLF42_RS00540	COG0582	viral genome integration into host DNA
JLF42_RS00550	COG2211	Major facilitator Superfamily
JLF42_RS00555	COG1501	Belongs to the glycosyl hydrolase 31 family
JLF42_RS00560	COG2982	Protein involved in outer membrane biogenesis
JLF42_RS00565	COG2233	PERMEase
JLF42_RS00570	COG0786	glutamate:sodium symporter activity
JLF42_RS00575	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JLF42_RS00580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLF42_RS00585	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JLF42_RS00600	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JLF42_RS00605	COG2194	sulfuric ester hydrolase activity
JLF42_RS00610	COG2860	membrane
JLF42_RS00615	COG1561	YicC-like family, N-terminal region
JLF42_RS00625	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JLF42_RS00630	COG3415	Transposase
JLF42_RS00630	COG2801	Transposase and inactivated derivatives
JLF42_RS00645	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JLF42_RS00650	COG2003	Belongs to the UPF0758 family
JLF42_RS00655	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JLF42_RS00660	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JLF42_RS00665	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JLF42_RS00670	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JLF42_RS00680	COG1519	Transferase
JLF42_RS00695	COG1216	Glycosyl transferase, family 2
JLF42_RS00710	COG0438	transferase activity, transferring glycosyl groups
JLF42_RS00715	COG0859	PFAM glycosyl transferase family 9
JLF42_RS00725	COG0859	PFAM glycosyl transferase family 9
JLF42_RS00740	COG1063	alcohol dehydrogenase
JLF42_RS00750	COG2861	carbohydrate metabolic process
JLF42_RS00755	COG4942	peptidase
JLF42_RS00760	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JLF42_RS00765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLF42_RS00770	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JLF42_RS00775	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
JLF42_RS00790	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JLF42_RS00795	COG2271	Major facilitator Superfamily
JLF42_RS00805	COG2186	Transcriptional regulator
JLF42_RS00820	COG3722	fumarate hydratase activity
JLF42_RS00840	COG1566	PFAM secretion protein HlyD family protein
JLF42_RS00845	COG0625	glutathione transferase activity
JLF42_RS00860	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS00865	COG0583	DNA-binding transcription factor activity
JLF42_RS00870	COG3713	MltA-interacting MipA family protein
JLF42_RS00890	COG0235	Class ii aldolase
JLF42_RS00895	COG3623	hexulose-6-phosphate isomerase
JLF42_RS00900	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JLF42_RS00905	COG1070	Carbohydrate kinase
JLF42_RS00910	COG2271	Major facilitator Superfamily
JLF42_RS00920	COG2731	YhcH YjgK YiaL family protein
JLF42_RS00930	COG1414	Transcriptional regulator
JLF42_RS00935	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLF42_RS00955	COG3977	Valine--pyruvate aminotransferase
JLF42_RS00965	COG2992	FlgJ-related protein
JLF42_RS00970	COG1609	Transcriptional regulator
JLF42_RS00970	COG2207	Transcriptional regulator
JLF42_RS00975	COG4214	carbohydrate transport
JLF42_RS00985	COG4213	ABC transporter substrate-binding protein
JLF42_RS00990	COG2115	Belongs to the xylose isomerase family
JLF42_RS00995	COG1070	Carbohydrate kinase
JLF42_RS01000	COG1335	isochorismatase
JLF42_RS01010	COG3274	enterobacterial common antigen metabolic process
JLF42_RS01020	COG0752	glycyl-tRNA synthetase alpha subunit
JLF42_RS01025	COG0751	glycine-tRNA ligase activity
JLF42_RS01035	COG2944	sequence-specific DNA binding
JLF42_RS01045	COG1278	Cold shock
JLF42_RS01050	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JLF42_RS01060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLF42_RS01070	COG1609	Transcriptional regulator
JLF42_RS01075	COG2885	chlorophyll binding
JLF42_RS01080	COG0243	molybdopterin cofactor binding
JLF42_RS01085	COG0456	acetyltransferase
JLF42_RS01090	COG2818	Glycosylase
JLF42_RS01095	COG5571	outer membrane autotransporter
JLF42_RS01100	COG2223	nitrite transmembrane transporter activity
JLF42_RS01105	COG2194	sulfuric ester hydrolase activity
JLF42_RS01115	COG0747	negative chemotaxis
JLF42_RS01120	COG0601	transmembrane transport
JLF42_RS01125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS01130	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS01135	COG4608	Belongs to the ABC transporter superfamily
JLF42_RS01140	COG1072	(Pantothenic acid kinase))
JLF42_RS01175	COG0250	Participates in transcription elongation, termination and antitermination
JLF42_RS01220	COG3706	GGDEF domain
JLF42_RS01230	COG2022	thiamine diphosphate biosynthetic process
JLF42_RS01235	COG2104	thiamine diphosphate biosynthetic process
JLF42_RS01240	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JLF42_RS01255	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
JLF42_RS01265	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JLF42_RS01275	COG3068	Protein conserved in bacteria
JLF42_RS01320	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JLF42_RS01330	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
JLF42_RS01350	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JLF42_RS01355	COG3657	addiction module killer protein
JLF42_RS01360	COG1187	pseudouridine synthase activity
JLF42_RS01375	COG4650	regulator
JLF42_RS01385	COG1690	Belongs to the RtcB family
JLF42_RS01390	COG3541	Predicted nucleotidyltransferase
JLF42_RS01395	COG0527	aspartate kinase activity
JLF42_RS01420	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLF42_RS01425	COG3223	Belongs to the PsiE family
JLF42_RS01450	COG4580	involved in the transport of maltose and maltodextrins
JLF42_RS01460	COG3161	chorismate lyase activity
JLF42_RS01470	COG2217	Heavy metal translocating P-type atpase
JLF42_RS01475	COG3714	YhhN family
JLF42_RS01485	COG3776	membrane
JLF42_RS01490	COG0742	ribosomal rna small subunit methyltransferase
JLF42_RS01495	COG0552	protein localization to endoplasmic reticulum
JLF42_RS01500	COG2884	Cell division ATP-binding protein ftsE
JLF42_RS01505	COG2177	Part of the ABC transporter FtsEX involved in
JLF42_RS01510	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JLF42_RS01515	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JLF42_RS01525	COG0456	acetyltransferase
JLF42_RS01530	COG0683	leucine binding
JLF42_RS01540	COG4177	L-phenylalanine transmembrane transporter activity
JLF42_RS01545	COG0411	ABC transporter
JLF42_RS01575	COG0584	glycerophosphoryl diester phosphodiesterase
JLF42_RS01585	COG0405	Gamma-glutamyltransferase
JLF42_RS01590	COG1247	-acetyltransferase
JLF42_RS01595	COG0673	inositol 2-dehydrogenase activity
JLF42_RS01600	COG1741	Belongs to the pirin family
JLF42_RS01605	COG1609	Transcriptional regulator
JLF42_RS01610	COG3265	gluconokinase activity
JLF42_RS01615	COG2610	gluconate transmembrane transporter activity
JLF42_RS01620	COG2937	Belongs to the GPAT DAPAT family
JLF42_RS01625	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JLF42_RS01630	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JLF42_RS01635	COG0534	Mate efflux family protein
JLF42_RS01640	COG3237	CsbD-like
JLF42_RS01645	COG0735	belongs to the Fur family
JLF42_RS01660	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JLF42_RS01670	COG0604	alcohol dehydrogenase
JLF42_RS01675	COG0305	Participates in initiation and elongation during chromosome replication
JLF42_RS01695	COG1448	Aminotransferase
JLF42_RS01700	COG3700	Belongs to the class B bacterial acid phosphatase family
JLF42_RS01710	COG2315	Protein conserved in bacteria
JLF42_RS01720	COG0629	single-stranded DNA binding
JLF42_RS01730	COG4943	cyclic-guanylate-specific phosphodiesterase activity
JLF42_RS01740	COG0789	Transcriptional regulator
JLF42_RS01750	COG2252	PERMEase
JLF42_RS01755	COG0025	NhaP-type Na H and K H
JLF42_RS01760	COG0583	DNA-binding transcription factor activity
JLF42_RS01765	COG1380	Effector of murein hydrolase LrgA
JLF42_RS01770	COG1346	cytolysis
JLF42_RS01775	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JLF42_RS01780	COG3162	membrane
JLF42_RS01785	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JLF42_RS01790	COG1301	dicarboxylic acid transport
JLF42_RS01795	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
JLF42_RS01835	COG0191	fructose-bisphosphate aldolase activity
JLF42_RS01850	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS01855	COG1129	ABC transporter
JLF42_RS01860	COG4191	Histidine kinase
JLF42_RS01860	COG0784	Response regulator, receiver
JLF42_RS01895	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JLF42_RS01900	COG0456	acetyltransferase
JLF42_RS01905	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
JLF42_RS01910	COG3454	Phosphonate metabolism
JLF42_RS01915	COG4778	phosphonate C-P lyase system protein PhnL
JLF42_RS01920	COG4107	phosphonate C-P lyase system protein PhnK
JLF42_RS01925	COG3627	carbon phosphorus lyase activity
JLF42_RS01930	COG3626	phosphonate metabolism
JLF42_RS01935	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
JLF42_RS01940	COG3624	Phosphonate C-P lyase system protein PhnG
JLF42_RS01945	COG2188	Transcriptional regulator
JLF42_RS01950	COG3639	organic phosphonate transmembrane transporter activity
JLF42_RS01955	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JLF42_RS01965	COG2764	glyoxalase bleomycin resistance protein dioxygenase
JLF42_RS01970	COG2824	Alkylphosphonate utilization operon protein PhnA
JLF42_RS01980	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JLF42_RS02000	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JLF42_RS02030	COG1309	transcriptional regulator
JLF42_RS02045	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JLF42_RS02050	COG1027	Aspartate ammonia-lyase
JLF42_RS02055	COG3030	protein affecting phage T7 exclusion by the F plasmid
JLF42_RS02060	COG0531	amino acid
JLF42_RS02070	COG0459	protein refolding
JLF42_RS02075	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JLF42_RS02080	COG0700	Nucleoside recognition
JLF42_RS02085	COG3366	ferrous iron transmembrane transporter activity
JLF42_RS02100	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JLF42_RS02105	COG5510	response to toxic substance
JLF42_RS02135	COG0583	DNA-binding transcription factor activity
JLF42_RS02145	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
JLF42_RS02150	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JLF42_RS02155	COG1053	succinate dehydrogenase
JLF42_RS02160	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
JLF42_RS02170	COG3264	Mechanosensitive ion channel
JLF42_RS02170	COG1511	domain protein
JLF42_RS02185	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
JLF42_RS02205	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JLF42_RS02210	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JLF42_RS02210	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JLF42_RS02215	COG0802	atpase or kinase
JLF42_RS02225	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JLF42_RS02230	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JLF42_RS02235	COG1923	regulation of RNA biosynthetic process
JLF42_RS02240	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JLF42_RS02245	COG0330	HflC and HflK could
JLF42_RS02250	COG0330	HflC and HflK could
JLF42_RS02255	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
JLF42_RS02265	COG1959	2 iron, 2 sulfur cluster binding
JLF42_RS02270	COG0557	exoribonuclease II activity
JLF42_RS02275	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLF42_RS02280	COG2801	Transposase and inactivated derivatives
JLF42_RS02280	COG3415	Transposase
JLF42_RS02285	COG0477	Major facilitator Superfamily
JLF42_RS02290	COG1960	acyl-CoA dehydrogenase activity
JLF42_RS02295	COG0840	transmembrane signaling receptor activity
JLF42_RS02305	COG3650	response to hydrogen peroxide
JLF42_RS02310	COG1073	alpha beta
JLF42_RS02325	COG3037	sugar-specific permease SgaT UlaA
JLF42_RS02360	COG0360	Binds together with S18 to 16S ribosomal RNA
JLF42_RS02365	COG2965	DNA replication, synthesis of RNA primer
JLF42_RS02370	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JLF42_RS02375	COG0359	binds to the 23S rRNA
JLF42_RS02380	COG3061	Opacity-associated protein A
JLF42_RS02385	COG0545	Peptidyl-prolyl cis-trans isomerase
JLF42_RS02390	COG1113	amino acid transport
JLF42_RS02400	COG0840	transmembrane signaling receptor activity
JLF42_RS02405	COG0697	spore germination
JLF42_RS02415	COG0702	epimerase
JLF42_RS02420	COG1733	regulation of RNA biosynthetic process
JLF42_RS02430	COG1218	3'(2'),5'-bisphosphate nucleotidase
JLF42_RS02435	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
JLF42_RS02445	COG1253	flavin adenine dinucleotide binding
JLF42_RS02455	COG0729	surface antigen
JLF42_RS02460	COG2911	Protein conserved in bacteria
JLF42_RS02465	COG2105	PFAM AIG2 family protein
JLF42_RS02485	COG1879	ABC-type sugar transport system periplasmic component
JLF42_RS02490	COG1129	ABC transporter
JLF42_RS02495	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS02500	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS02510	COG0583	DNA-binding transcription factor activity
JLF42_RS02520	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JLF42_RS02525	COG3028	Belongs to the UPF0307 family
JLF42_RS02530	COG0312	modulator of DNA gyrase
JLF42_RS02565	COG3964	amidohydrolase
JLF42_RS02585	COG3711	transcriptional antiterminator
JLF42_RS02585	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS02590	COG3077	Addiction module antitoxin, RelB DinJ family
JLF42_RS02595	COG2026	Addiction module toxin, RelE StbE family
JLF42_RS02600	COG0602	queuosine metabolic process
JLF42_RS02610	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS02610	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS02610	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS02635	COG0366	Alpha amylase catalytic
JLF42_RS02640	COG1263	PTS System
JLF42_RS02640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS02655	COG3525	Glycosyl hydrolase, family 20, catalytic domain
JLF42_RS02660	COG0251	oxidation-reduction process
JLF42_RS02670	COG0540	Belongs to the ATCase OTCase family
JLF42_RS02685	COG1438	arginine binding
JLF42_RS02690	COG1288	antiporter activity
JLF42_RS02705	COG2235	arginine
JLF42_RS02710	COG2731	YhcH YjgK YiaL family protein
JLF42_RS02715	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JLF42_RS02720	COG0129	dihydroxy-acid dehydratase activity
JLF42_RS02725	COG2211	Major facilitator Superfamily
JLF42_RS02730	COG3507	Belongs to the glycosyl hydrolase 43 family
JLF42_RS02735	COG1414	Transcriptional regulator
JLF42_RS02740	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JLF42_RS02765	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
JLF42_RS02795	COG1196	nuclear chromosome segregation
JLF42_RS02850	COG1609	Transcriptional regulator
JLF42_RS02860	COG2211	Major facilitator Superfamily
JLF42_RS02885	COG1335	isochorismatase
JLF42_RS02905	COG4191	Histidine kinase
JLF42_RS02915	COG0346	lactoylglutathione lyase activity
JLF42_RS02920	COG0740	serine-type endopeptidase activity
JLF42_RS02925	COG2850	peptidyl-arginine hydroxylation
JLF42_RS02930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLF42_RS02935	COG5457	Domain of unknown function (DUF1127)
JLF42_RS02945	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLF42_RS02950	COG0583	DNA-binding transcription factor activity
JLF42_RS02955	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS02970	COG0640	Transcriptional regulator
JLF42_RS02990	COG2733	membrane
JLF42_RS03015	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS03035	COG0523	cobalamin synthesis protein
JLF42_RS03040	COG2879	small protein
JLF42_RS03045	COG1966	Carbon starvation protein
JLF42_RS03055	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLF42_RS03060	COG2368	4-hydroxyphenylacetate
JLF42_RS03080	COG3971	2-oxopent-4-enoate hydratase activity
JLF42_RS03090	COG3384	dioxygenase
JLF42_RS03095	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS03100	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLF42_RS03105	COG1846	Transcriptional regulator
JLF42_RS03110	COG0840	transmembrane signaling receptor activity
JLF42_RS03165	COG1484	DNA-dependent DNA replication
JLF42_RS03175	COG1764	response to oxidative stress
JLF42_RS03180	COG1846	Transcriptional regulator
JLF42_RS03185	COG1309	transcriptional regulator
JLF42_RS03190	COG3610	response to peptide
JLF42_RS03195	COG2966	Psort location CytoplasmicMembrane, score
JLF42_RS03200	COG2197	response regulator
JLF42_RS03205	COG2197	response regulator
JLF42_RS03210	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLF42_RS03215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS03220	COG2801	Transposase and inactivated derivatives
JLF42_RS03220	COG3415	Transposase
JLF42_RS03225	COG4114	ferric iron reductase
JLF42_RS03245	COG2813	Specifically methylates the guanine in position
JLF42_RS03250	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
JLF42_RS03255	COG0456	acetyltransferase
JLF42_RS03260	COG1011	Hydrolase
JLF42_RS03265	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JLF42_RS03270	COG2823	Periplasmic or secreted lipoprotein
JLF42_RS03275	COG5487	UPF0391 membrane protein
JLF42_RS03280	COG4667	esterase of the alpha-beta hydrolase superfamily
JLF42_RS03285	COG0084	hydrolase, TatD family'
JLF42_RS03290	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLF42_RS03295	COG1328	CTP reductase activity
JLF42_RS03300	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JLF42_RS03305	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JLF42_RS03325	COG3726	membrane protein affecting hemolysin expression
JLF42_RS03330	COG0560	Phosphoserine phosphatase
JLF42_RS03345	COG0604	alcohol dehydrogenase
JLF42_RS03355	COG0488	(ABC) transporter
JLF42_RS03360	COG0741	lytic transglycosylase activity
JLF42_RS03365	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
JLF42_RS03370	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JLF42_RS03375	COG0406	alpha-ribazole phosphatase activity
JLF42_RS03380	COG2207	Transcriptional regulator
JLF42_RS03380	COG3708	Transcriptional regulator
JLF42_RS03385	COG3045	CreA protein
JLF42_RS03390	COG0745	RESPONSE REGULATOR receiver
JLF42_RS03400	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
JLF42_RS03410	COG0460	homoserine dehydrogenase
JLF42_RS03410	COG0527	aspartate kinase activity
JLF42_RS03420	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JLF42_RS03430	COG3022	response to hydroperoxide
JLF42_RS03435	COG1115	amino acid carrier protein
JLF42_RS03445	COG0521	Mo-molybdopterin cofactor biosynthetic process
JLF42_RS03450	COG0477	Major facilitator Superfamily
JLF42_RS03455	COG1584	GPR1 FUN34 yaaH family protein
JLF42_RS03470	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLF42_RS03475	COG0583	DNA-binding transcription factor activity
JLF42_RS03480	COG0268	Binds directly to 16S ribosomal RNA
JLF42_RS03485	COG0196	riboflavin kinase activity
JLF42_RS03500	COG1047	Peptidyl-prolyl cis-trans
JLF42_RS03505	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JLF42_RS03515	COG0505	Belongs to the CarA family
JLF42_RS03535	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLF42_RS03540	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLF42_RS03540	COG0475	glutathione-regulated potassium exporter activity
JLF42_RS03550	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JLF42_RS03555	COG2967	ApaG domain
JLF42_RS03565	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
JLF42_RS03575	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JLF42_RS03580	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JLF42_RS03595	COG0564	pseudouridine synthase activity
JLF42_RS03600	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JLF42_RS03605	COG0417	DNA replication proofreading
JLF42_RS03610	COG0235	Class ii aldolase
JLF42_RS03615	COG2160	L-arabinose isomerase activity
JLF42_RS03620	COG1069	ribulokinase activity
JLF42_RS03630	COG0586	Pfam SNARE associated Golgi protein
JLF42_RS03640	COG1178	ABC-type Fe3 transport system permease component
JLF42_RS03660	COG2814	Major facilitator Superfamily
JLF42_RS03680	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JLF42_RS03695	COG0028	Belongs to the TPP enzyme family
JLF42_RS03705	COG1609	Transcriptional regulator
JLF42_RS03710	COG2001	Belongs to the MraZ family
JLF42_RS03725	COG0768	penicillin binding
JLF42_RS03730	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JLF42_RS03735	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JLF42_RS03740	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JLF42_RS03750	COG0772	Belongs to the SEDS family
JLF42_RS03765	COG1181	Belongs to the D-alanine--D-alanine ligase family
JLF42_RS03775	COG0849	cell division
JLF42_RS03780	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JLF42_RS03785	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
JLF42_RS03795	COG0653	protein targeting
JLF42_RS03800	COG0494	nUDIX hydrolase
JLF42_RS03810	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
JLF42_RS03820	COG0516	GMP reductase activity
JLF42_RS03825	COG1459	type II secretion system
JLF42_RS03830	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JLF42_RS03835	COG4969	Belongs to the N-Me-Phe pilin family
JLF42_RS03845	COG3023	N-Acetylmuramoyl-L-alanine amidase
JLF42_RS03850	COG3725	Membrane protein required for beta-lactamase induction
JLF42_RS03855	COG3940	Belongs to the glycosyl hydrolase 43 family
JLF42_RS03860	COG2211	Major facilitator Superfamily
JLF42_RS03865	COG1113	amino acid transport
JLF42_RS03875	COG2186	Transcriptional regulator
JLF42_RS03880	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JLF42_RS03885	COG0508	dehydrogenase complex catalyzes the overall conversion of
JLF42_RS03890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JLF42_RS03905	COG1049	propionate catabolic process, 2-methylcitrate cycle
JLF42_RS03915	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JLF42_RS03920	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JLF42_RS03930	COG2132	Multicopper oxidase
JLF42_RS03935	COG4993	Dehydrogenase
JLF42_RS03945	COG0288	reversible hydration of carbon dioxide
JLF42_RS03950	COG1131	(ABC) transporter
JLF42_RS03955	COG0842	Transport permease protein
JLF42_RS03960	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS03965	COG0726	polysaccharide deacetylase
JLF42_RS03970	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JLF42_RS03975	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JLF42_RS03980	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JLF42_RS03985	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JLF42_RS03990	COG0617	tRNA 3'-terminal CCA addition
JLF42_RS03995	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLF42_RS04005	COG1489	DNA binding
JLF42_RS04010	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JLF42_RS04015	COG1643	Atp-dependent helicase
JLF42_RS04020	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JLF42_RS04025	COG4774	siderophore transport
JLF42_RS04030	COG1120	ATPase activity
JLF42_RS04035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JLF42_RS04040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS04045	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JLF42_RS04060	COG2860	membrane
JLF42_RS04075	COG0232	Belongs to the dGTPase family. Type 2 subfamily
JLF42_RS04085	COG3835	regulator
JLF42_RS04115	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JLF42_RS04130	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
JLF42_RS04140	COG0575	Belongs to the CDS family
JLF42_RS04145	COG0750	zinc metalloprotease
JLF42_RS04150	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLF42_RS04165	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JLF42_RS04170	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLF42_RS04175	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLF42_RS04180	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JLF42_RS04190	COG0825	malonyl-CoA metabolic process
JLF42_RS04195	COG1982	Orn Lys Arg decarboxylase major
JLF42_RS04200	COG0346	lactoylglutathione lyase activity
JLF42_RS04205	COG0037	tRNA processing
JLF42_RS04210	COG4568	rho-dependent transcription termination
JLF42_RS04225	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JLF42_RS04230	COG3015	lipoprotein NlpE involved in copper resistance
JLF42_RS04240	COG1720	tRNA m6t6A37 methyltransferase activity
JLF42_RS04250	COG1464	Belongs to the NlpA lipoprotein family
JLF42_RS04255	COG2011	ABC-type metal ion transport system permease component
JLF42_RS04265	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JLF42_RS04305	COG0583	DNA-binding transcription factor activity
JLF42_RS04310	COG2814	Major facilitator Superfamily
JLF42_RS04315	COG3021	interspecies interaction between organisms
JLF42_RS04320	COG2226	methyltransferase
JLF42_RS04325	COG0741	lytic transglycosylase activity
JLF42_RS04325	COG1388	LysM domain
JLF42_RS04330	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLF42_RS04335	COG2226	methyltransferase
JLF42_RS04360	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS04365	COG4608	Belongs to the ABC transporter superfamily
JLF42_RS04380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS04390	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLF42_RS04395	COG1960	acyl-CoA dehydrogenase activity
JLF42_RS04405	COG0121	glutamine amidotransferase
JLF42_RS04410	COG3034	peptidoglycan biosynthetic process
JLF42_RS04425	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JLF42_RS04430	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JLF42_RS04445	COG2991	Protein conserved in bacteria
JLF42_RS04450	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JLF42_RS04455	COG2195	Cleaves the N-terminal amino acid of tripeptides
JLF42_RS04465	COG1073	alpha beta
JLF42_RS04490	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JLF42_RS04495	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JLF42_RS04525	COG2826	transposase and inactivated derivatives, IS30 family
JLF42_RS04545	COG5001	Diguanylate cyclase
JLF42_RS04545	COG3300	MHYT domain
JLF42_RS04565	COG2814	Major facilitator Superfamily
JLF42_RS04570	COG1566	PFAM secretion protein HlyD family protein
JLF42_RS04585	COG2207	Transcriptional regulator
JLF42_RS04585	COG3708	Transcriptional regulator
JLF42_RS04595	COG0628	permease
JLF42_RS04600	COG0833	amino acid
JLF42_RS04605	COG2040	homocysteine
JLF42_RS04610	COG4521	taurine ABC transporter
JLF42_RS04615	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JLF42_RS04620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JLF42_RS04625	COG2175	clavaminate synthase activity
JLF42_RS04635	COG0113	porphobilinogen synthase activity
JLF42_RS04650	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JLF42_RS04660	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JLF42_RS04680	COG1181	Belongs to the D-alanine--D-alanine ligase family
JLF42_RS04700	COG1785	Belongs to the alkaline phosphatase family
JLF42_RS04710	COG3706	GGDEF domain
JLF42_RS04715	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JLF42_RS04720	COG1671	Belongs to the UPF0178 family
JLF42_RS04725	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JLF42_RS04735	COG4126	flavin adenine dinucleotide binding
JLF42_RS04740	COG3123	guanosine phosphorylase activity
JLF42_RS04750	COG1940	carbohydrate kinase activity
JLF42_RS04755	COG0419	ATPase involved in DNA repair
JLF42_RS04760	COG0420	3'-5' exonuclease activity
JLF42_RS04770	COG5002	protein histidine kinase activity
JLF42_RS04785	COG0366	Alpha amylase catalytic
JLF42_RS04800	COG0450	alkyl hydroperoxide reductase
JLF42_RS04805	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
JLF42_RS04820	COG1862	Preprotein translocase
JLF42_RS04825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JLF42_RS04830	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JLF42_RS04845	COG3248	Nucleoside-binding outer membrane protein
JLF42_RS04850	COG4238	major outer membrane lipoprotein
JLF42_RS04855	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JLF42_RS04860	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JLF42_RS04860	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JLF42_RS04865	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
JLF42_RS04870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JLF42_RS04875	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JLF42_RS04880	COG0667	Aldo Keto reductase
JLF42_RS04885	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JLF42_RS04890	COG0142	geranyltranstransferase activity
JLF42_RS04905	COG0693	protein deglycase activity
JLF42_RS04910	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JLF42_RS04920	COG2814	Major facilitator Superfamily
JLF42_RS04925	COG0109	protoheme IX farnesyltransferase activity
JLF42_RS04930	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JLF42_RS04935	COG1845	cytochrome c oxidase, subunit III
JLF42_RS04940	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JLF42_RS04945	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JLF42_RS04950	COG2223	nitrite transmembrane transporter activity
JLF42_RS04955	COG3056	Lipoprotein
JLF42_RS04960	COG0271	Belongs to the BolA IbaG family
JLF42_RS04965	COG0544	peptidyl-prolyl cis-trans isomerase activity
JLF42_RS04980	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JLF42_RS04985	COG0776	regulation of translation
JLF42_RS04990	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JLF42_RS04995	COG1555	photosystem II stabilization
JLF42_RS05000	COG0824	Thioesterase
JLF42_RS05005	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JLF42_RS05010	COG4533	DNA binding
JLF42_RS05015	COG0561	phosphatase activity
JLF42_RS05025	COG1522	sequence-specific DNA binding
JLF42_RS05030	COG1132	(ABC) transporter
JLF42_RS05035	COG1132	(ABC) transporter
JLF42_RS05040	COG0347	Belongs to the P(II) protein family
JLF42_RS05045	COG0004	ammonium transporteR
JLF42_RS05050	COG1946	Acyl-CoA thioesterase
JLF42_RS05055	COG3126	Type III secretion system lipoprotein chaperone (YscW)
JLF42_RS05060	COG3695	enzyme binding
JLF42_RS05080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLF42_RS05085	COG2364	Membrane
JLF42_RS05090	COG1609	Transcriptional regulator
JLF42_RS05120	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JLF42_RS05140	COG0110	maltose O-acetyltransferase activity
JLF42_RS05155	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS05160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS05165	COG1309	transcriptional regulator
JLF42_RS05170	COG3264	Mechanosensitive ion channel
JLF42_RS05170	COG1196	nuclear chromosome segregation
JLF42_RS05180	COG3923	Primosomal replication protein n
JLF42_RS05185	COG2832	Protein of unknown function (DUF454)
JLF42_RS05190	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JLF42_RS05200	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JLF42_RS05205	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JLF42_RS05210	COG0326	Molecular chaperone. Has ATPase activity
JLF42_RS05220	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JLF42_RS05225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLF42_RS05230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLF42_RS05230	COG4651	solute:proton antiporter activity
JLF42_RS05235	COG2223	nitrite transmembrane transporter activity
JLF42_RS05240	COG0737	Belongs to the 5'-nucleotidase family
JLF42_RS05245	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLF42_RS05250	COG3735	TraB family
JLF42_RS05265	COG1585	Membrane protein implicated in regulation of membrane protease activity
JLF42_RS05270	COG0330	HflC and HflK could
JLF42_RS05280	COG4619	ABC transporter
JLF42_RS05285	COG0390	transport system, permease component
JLF42_RS05290	COG3118	belongs to the thioredoxin family
JLF42_RS05295	COG0300	oxidoreductase activity
JLF42_RS05300	COG2755	lipolytic protein G-D-S-L family
JLF42_RS05305	COG4181	ATPase activity
JLF42_RS05310	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JLF42_RS05325	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JLF42_RS05330	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JLF42_RS05340	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JLF42_RS05345	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JLF42_RS05355	COG1988	membrane-bound metal-dependent
JLF42_RS05360	COG1609	Transcriptional regulator
JLF42_RS05365	COG1263	PTS System
JLF42_RS05365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS05365	COG2190	(PTS) system
JLF42_RS05370	COG2501	S4 domain
JLF42_RS05420	COG2200	EAL domain
JLF42_RS05465	COG1113	amino acid transport
JLF42_RS05470	COG1396	sequence-specific DNA binding
JLF42_RS05480	COG2211	Major facilitator Superfamily
JLF42_RS05495	COG1609	Transcriptional regulator
JLF42_RS05500	COG0668	transmembrane transport
JLF42_RS05505	COG0477	Major facilitator Superfamily
JLF42_RS05520	COG0778	Nitroreductase
JLF42_RS05525	COG2315	Protein conserved in bacteria
JLF42_RS05540	COG2207	Transcriptional regulator
JLF42_RS05565	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
JLF42_RS05615	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS05620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS05625	COG0601	transmembrane transport
JLF42_RS05645	COG4221	oxidoreductase activity
JLF42_RS05660	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
JLF42_RS05680	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JLF42_RS05725	COG2977	Belongs to the P-Pant transferase superfamily
JLF42_RS05730	COG4771	TonB-dependent receptor
JLF42_RS05735	COG2382	esterase
JLF42_RS05740	COG3251	PFAM MbtH domain protein
JLF42_RS05745	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLF42_RS05745	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JLF42_RS05750	COG1120	ATPase activity
JLF42_RS05755	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS05760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS05770	COG4592	Periplasmic binding protein
JLF42_RS05775	COG1169	isochorismate synthase
JLF42_RS05780	COG1021	2,3-dihydroxybenzoate-AMP ligase
JLF42_RS05785	COG1535	isochorismatase
JLF42_RS05785	COG3433	isochorismatase activity
JLF42_RS05790	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS05795	COG2050	protein possibly involved in aromatic compounds catabolism
JLF42_RS05800	COG1966	Carbon starvation protein
JLF42_RS05805	COG2879	small protein
JLF42_RS05825	COG0371	Dehydrogenase
JLF42_RS05830	COG1129	ABC transporter
JLF42_RS05835	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS05850	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JLF42_RS05855	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JLF42_RS05870	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
JLF42_RS05875	COG0235	Class ii aldolase
JLF42_RS05880	COG0436	Aminotransferase
JLF42_RS05885	COG1475	DNA binding
JLF42_RS05890	COG3969	phosphoadenosine phosphosulfate
JLF42_RS05895	COG0583	DNA-binding transcription factor activity
JLF42_RS05915	COG1063	alcohol dehydrogenase
JLF42_RS05920	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JLF42_RS05930	COG3719	Belongs to the RNase T2 family
JLF42_RS05935	COG3069	C4-dicarboxylate transmembrane transporter activity
JLF42_RS05950	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JLF42_RS05955	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLF42_RS05960	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLF42_RS05965	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JLF42_RS05970	COG0583	DNA-binding transcription factor activity
JLF42_RS05975	COG0321	lipoyl(octanoyl) transferase activity
JLF42_RS05985	COG1686	Belongs to the peptidase S11 family
JLF42_RS05990	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JLF42_RS05995	COG0772	Belongs to the SEDS family
JLF42_RS06000	COG0768	penicillin binding
JLF42_RS06010	COG0799	negative regulation of ribosome biogenesis
JLF42_RS06020	COG1466	dna polymerase III delta subunit
JLF42_RS06035	COG2888	peptidyl-tyrosine sulfation
JLF42_RS06040	COG1957	nucleoside hydrolase
JLF42_RS06045	COG1126	abc transporter atp-binding protein
JLF42_RS06050	COG0765	amino acid transport
JLF42_RS06055	COG0765	amino acid transport
JLF42_RS06070	COG4535	Mg2 and Co2 transporter CorC
JLF42_RS06075	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JLF42_RS06080	COG1702	phosphate starvation-inducible protein PhoH
JLF42_RS06085	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JLF42_RS06090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLF42_RS06130	COG0367	asparagine synthase
JLF42_RS06135	COG0647	UMP catabolic process
JLF42_RS06140	COG1846	Transcriptional regulator
JLF42_RS06140	COG1940	carbohydrate kinase activity
JLF42_RS06145	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JLF42_RS06155	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS06155	COG1263	PTS System
JLF42_RS06155	COG2190	(PTS) system
JLF42_RS06160	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLF42_RS06175	COG0735	belongs to the Fur family
JLF42_RS06190	COG0596	Alpha beta hydrolase
JLF42_RS06195	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
JLF42_RS06200	COG0033	Phosphoglucomutase
JLF42_RS06205	COG0531	amino acid
JLF42_RS06210	COG1982	Orn Lys Arg decarboxylase major
JLF42_RS06220	COG0745	RESPONSE REGULATOR receiver
JLF42_RS06225	COG2205	protein histidine kinase activity
JLF42_RS06230	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JLF42_RS06235	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JLF42_RS06240	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
JLF42_RS06255	COG0415	Belongs to the DNA photolyase family
JLF42_RS06260	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JLF42_RS06265	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JLF42_RS06270	COG1984	allophanate hydrolase subunit 2
JLF42_RS06280	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JLF42_RS06285	COG0372	Belongs to the citrate synthase family
JLF42_RS06290	COG2009	succinate dehydrogenase
JLF42_RS06295	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JLF42_RS06300	COG1053	succinate dehydrogenase
JLF42_RS06305	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JLF42_RS06310	COG0567	Dehydrogenase, E1 component
JLF42_RS06315	COG0508	dehydrogenase complex catalyzes the overall conversion of
JLF42_RS06320	COG0045	succinate-CoA ligase (ADP-forming) activity
JLF42_RS06325	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JLF42_RS06330	COG2188	Transcriptional regulator
JLF42_RS06335	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS06335	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS06335	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS06340	COG0383	alpha-mannosidase activity
JLF42_RS06345	COG1271	oxidase subunit
JLF42_RS06350	COG1294	oxidase, subunit
JLF42_RS06355	COG4890	Cyd operon protein YbgT
JLF42_RS06360	COG3790	cyd operon protein YbgE
JLF42_RS06365	COG0824	Thioesterase
JLF42_RS06370	COG0811	peptide transport
JLF42_RS06375	COG0848	biopolymer transport protein
JLF42_RS06380	COG3064	Membrane
JLF42_RS06390	COG2885	chlorophyll binding
JLF42_RS06395	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JLF42_RS06425	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JLF42_RS06430	COG3201	nicotinamide mononucleotide transporter
JLF42_RS06435	COG1230	cation diffusion facilitator family transporter
JLF42_RS06445	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JLF42_RS06455	COG2017	converts alpha-aldose to the beta-anomer
JLF42_RS06460	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JLF42_RS06465	COG1085	galactose-1-phosphate uridylyltransferase
JLF42_RS06470	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JLF42_RS06475	COG1119	ATPase activity
JLF42_RS06480	COG2005	Transcriptional regulator
JLF42_RS06480	COG3585	molybdate ion transport
JLF42_RS06490	COG0725	ABC transporter, periplasmic molybdate-binding protein
JLF42_RS06495	COG4149	molybdate abc transporter
JLF42_RS06505	COG0561	phosphatase activity
JLF42_RS06510	COG2706	6-phosphogluconolactonase activity
JLF42_RS06515	COG4677	pectinesterase activity
JLF42_RS06525	COG0010	Belongs to the arginase family
JLF42_RS06535	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JLF42_RS06540	COG2986	histidine ammonia-lyase
JLF42_RS06545	COG1881	PFAM PEBP family protein
JLF42_RS06550	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JLF42_RS06555	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JLF42_RS06560	COG0156	8-amino-7-oxononanoate synthase activity
JLF42_RS06565	COG2226	methyltransferase
JLF42_RS06570	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JLF42_RS06575	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JLF42_RS06595	COG0521	Mo-molybdopterin cofactor biosynthetic process
JLF42_RS06600	COG0315	cyclic pyranopterin monophosphate synthase activity
JLF42_RS06605	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JLF42_RS06610	COG0314	molybdopterin synthase activity
JLF42_RS06615	COG0670	Belongs to the BI1 family
JLF42_RS06620	COG0392	lysyltransferase activity
JLF42_RS06625	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JLF42_RS06630	COG3568	Endonuclease Exonuclease Phosphatase
JLF42_RS06640	COG0842	Transport permease protein
JLF42_RS06645	COG0842	Transport permease protein
JLF42_RS06650	COG1131	(ABC) transporter
JLF42_RS06655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS06660	COG1309	transcriptional regulator
JLF42_RS06665	COG0513	Belongs to the DEAD box helicase family
JLF42_RS06690	COG3121	Chaperone
JLF42_RS06695	COG3539	Fimbrial protein
JLF42_RS06700	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JLF42_RS06710	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JLF42_RS06720	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
JLF42_RS06725	COG0668	transmembrane transport
JLF42_RS06730	COG1126	abc transporter atp-binding protein
JLF42_RS06735	COG0765	amino acid transport
JLF42_RS06740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS06745	COG0783	Belongs to the Dps family
JLF42_RS06755	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JLF42_RS06760	COG2194	sulfuric ester hydrolase activity
JLF42_RS06770	COG1321	iron dependent repressor
JLF42_RS06775	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JLF42_RS06780	COG1566	PFAM secretion protein HlyD family protein
JLF42_RS06785	COG2814	Major facilitator Superfamily
JLF42_RS06795	COG0667	Aldo Keto reductase
JLF42_RS06805	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS06810	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS06815	COG2188	Transcriptional regulator
JLF42_RS06820	COG1376	ErfK ybiS ycfS ynhG family protein
JLF42_RS06825	COG0488	(ABC) transporter
JLF42_RS06835	COG2271	Major facilitator Superfamily
JLF42_RS06840	COG1609	Transcriptional regulator
JLF42_RS06850	COG0561	phosphatase activity
JLF42_RS06855	COG1882	Formate acetyltransferase
JLF42_RS06860	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLF42_RS06865	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JLF42_RS06870	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JLF42_RS06880	COG1446	asparaginase
JLF42_RS06915	COG2133	pyrroloquinoline quinone binding
JLF42_RS06920	COG0625	glutathione transferase activity
JLF42_RS06925	COG1686	Belongs to the peptidase S11 family
JLF42_RS06930	COG1349	DNA-binding transcription factor activity
JLF42_RS06935	COG0671	phosphoesterase, PA-phosphatase related
JLF42_RS06945	COG2814	Major facilitator Superfamily
JLF42_RS06950	COG0561	phosphatase activity
JLF42_RS06955	COG0738	Major facilitator superfamily
JLF42_RS06960	COG3226	Transcriptional regulator
JLF42_RS06970	COG1393	Belongs to the ArsC family
JLF42_RS06975	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JLF42_RS06980	COG0640	Transcriptional regulator
JLF42_RS07185	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JLF42_RS07205	COG0583	DNA-binding transcription factor activity
JLF42_RS07215	COG1335	isochorismatase
JLF42_RS07225	COG1702	phosphate starvation-inducible protein PhoH
JLF42_RS07235	COG2822	iron ion transport
JLF42_RS07245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JLF42_RS07255	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JLF42_RS07260	COG0506	proline dehydrogenase activity
JLF42_RS07260	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JLF42_RS07260	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JLF42_RS07270	COG1309	transcriptional regulator
JLF42_RS07275	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS07280	COG1335	isochorismatase
JLF42_RS07285	COG0251	oxidation-reduction process
JLF42_RS07290	COG2267	carboxylic ester hydrolase activity
JLF42_RS07295	COG0778	Nitroreductase
JLF42_RS07300	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLF42_RS07305	COG2233	PERMEase
JLF42_RS07325	COG3729	General stress protein
JLF42_RS07350	COG0300	oxidoreductase activity
JLF42_RS07355	COG1733	regulation of RNA biosynthetic process
JLF42_RS07360	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS07370	COG2239	Acts as a magnesium transporter
JLF42_RS07380	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JLF42_RS07385	COG1126	abc transporter atp-binding protein
JLF42_RS07390	COG0765	amino acid transport
JLF42_RS07445	COG1953	Uracil, thiamine, allantoin
JLF42_RS07450	COG0402	S-adenosylhomocysteine deaminase activity
JLF42_RS07455	COG2351	hydroxyisourate hydrolase activity
JLF42_RS07460	COG3195	allantoin biosynthetic process
JLF42_RS07460	COG3648	Uricase
JLF42_RS07465	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLF42_RS07500	COG1696	Membrane protein involved in D-alanine export
JLF42_RS07505	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLF42_RS07535	COG0670	Belongs to the BI1 family
JLF42_RS07575	COG2920	part of a sulfur-relay system
JLF42_RS07580	COG1254	Belongs to the acylphosphatase family
JLF42_RS07590	COG1881	PFAM PEBP family protein
JLF42_RS07595	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JLF42_RS07605	COG1832	CoA-binding protein
JLF42_RS07610	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
JLF42_RS07615	COG1803	Methylglyoxal synthase
JLF42_RS07620	COG0210	DNA helicase
JLF42_RS07625	COG3304	Inner membrane component domain
JLF42_RS07630	COG1289	transmembrane transporter activity
JLF42_RS07635	COG3070	regulator of competence-specific genes
JLF42_RS07640	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
JLF42_RS07650	COG3120	sequence-specific DNA binding
JLF42_RS07655	COG1067	ATP-dependent peptidase activity
JLF42_RS07665	COG3130	regulation of translation
JLF42_RS07670	COG3009	Protein conserved in bacteria
JLF42_RS07675	COG3008	intermembrane lipid transfer
JLF42_RS07675	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JLF42_RS07680	COG2995	paraquat-inducible protein a
JLF42_RS07685	COG0488	(ABC) transporter
JLF42_RS07690	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JLF42_RS07690	COG0116	Belongs to the methyltransferase superfamily
JLF42_RS07695	COG0633	Ferredoxin
JLF42_RS07695	COG3217	Mosc domain protein beta barrel domain protein
JLF42_RS07705	COG0167	dihydroorotate dehydrogenase activity
JLF42_RS07710	COG0431	NADPH-dependent FMN reductase
JLF42_RS07715	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JLF42_RS07720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS07725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JLF42_RS07735	COG0308	aminopeptidase N
JLF42_RS07740	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JLF42_RS07745	COG0017	Asparaginyl-tRNA synthetase
JLF42_RS07755	COG1448	Aminotransferase
JLF42_RS07760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLF42_RS07765	COG3108	Peptidase M15
JLF42_RS07770	COG2989	Protein conserved in bacteria
JLF42_RS07775	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JLF42_RS07780	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
JLF42_RS07790	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JLF42_RS07795	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JLF42_RS07800	COG3173	Aminoglycoside phosphotransferase
JLF42_RS07805	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
JLF42_RS07810	COG2835	tetraacyldisaccharide 4'-kinase activity
JLF42_RS07815	COG3214	Protein conserved in bacteria
JLF42_RS07820	COG1663	tetraacyldisaccharide 4'-kinase activity
JLF42_RS07830	COG0658	competence protein
JLF42_RS07830	COG2333	competence protein COMEC
JLF42_RS07835	COG0776	regulation of translation
JLF42_RS07840	COG0539	negative regulation of cytoplasmic translation
JLF42_RS07845	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JLF42_RS07850	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JLF42_RS07855	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JLF42_RS07860	COG2323	membrane
JLF42_RS07865	COG1944	ATP diphosphatase activity
JLF42_RS07870	COG2116	formate transmembrane transporter activity
JLF42_RS07875	COG1882	Formate acetyltransferase
JLF42_RS07880	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JLF42_RS07890	COG0477	Major facilitator Superfamily
JLF42_RS07895	COG3302	dmso reductase anchor subunit
JLF42_RS07905	COG0243	molybdopterin cofactor binding
JLF42_RS07910	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JLF42_RS07915	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JLF42_RS07920	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JLF42_RS07925	COG1674	ftsk spoiiie
JLF42_RS07925	COG1178	ABC-type Fe3 transport system permease component
JLF42_RS07935	COG0492	ferredoxin-NADP+ reductase activity
JLF42_RS07940	COG4988	ABC transporter
JLF42_RS07945	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JLF42_RS07950	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
JLF42_RS07955	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JLF42_RS07960	COG0542	response to heat
JLF42_RS07965	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
JLF42_RS07970	COG1278	Cold shock
JLF42_RS07980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS07985	COG2990	Protein conserved in bacteria
JLF42_RS07990	COG3593	DNA synthesis involved in DNA repair
JLF42_RS08000	COG2431	L-lysine efflux transmembrane transporter activity
JLF42_RS08010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLF42_RS08020	COG0028	Belongs to the TPP enzyme family
JLF42_RS08025	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JLF42_RS08030	COG0702	epimerase
JLF42_RS08035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLF42_RS08040	COG3397	chitin binding
JLF42_RS08055	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JLF42_RS08080	COG2165	general secretion pathway protein
JLF42_RS08090	COG2165	general secretion pathway protein
JLF42_RS08095	COG1459	type II secretion system
JLF42_RS08100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JLF42_RS08105	COG1450	Type ii and iii secretion system protein
JLF42_RS08110	COG3031	protein transport across the cell outer membrane
JLF42_RS08135	COG3023	N-Acetylmuramoyl-L-alanine amidase
JLF42_RS08150	COG1126	abc transporter atp-binding protein
JLF42_RS08155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS08160	COG4215	(ABC) transporter
JLF42_RS08165	COG4160	amino acid transport
JLF42_RS08170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS08175	COG5002	protein histidine kinase activity
JLF42_RS08180	COG0745	RESPONSE REGULATOR receiver
JLF42_RS08185	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLF42_RS08195	COG1177	transmembrane transport
JLF42_RS08200	COG1176	ABC-type spermidine putrescine transport system, permease component I
JLF42_RS08205	COG3842	ATPase activity
JLF42_RS08210	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JLF42_RS08220	COG0189	ligase activity
JLF42_RS08225	COG0778	Nitroreductase
JLF42_RS08240	COG2985	domain, Protein
JLF42_RS08240	COG0569	domain protein
JLF42_RS08335	COG4695	Portal protein
JLF42_RS08370	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JLF42_RS08460	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
JLF42_RS08475	COG2943	transferase activity, transferring hexosyl groups
JLF42_RS08480	COG5645	(Lipo)protein
JLF42_RS08495	COG1560	Kdo2-lipid A biosynthetic process
JLF42_RS08500	COG1054	Belongs to the UPF0176 family
JLF42_RS08505	COG2353	YceI-like domain
JLF42_RS08510	COG3038	cytochrome b561
JLF42_RS08535	COG0418	dihydroorotase activity
JLF42_RS08545	COG0477	Major facilitator Superfamily
JLF42_RS08550	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS08555	COG3132	Protein of unknown function, DUF480
JLF42_RS08565	COG0728	peptidoglycan biosynthetic process
JLF42_RS08590	COG1558	bacterial-type flagellum-dependent cell motility
JLF42_RS08595	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JLF42_RS08600	COG1749	Flagellar hook protein flgE
JLF42_RS08610	COG4786	Flagellar basal body rod
JLF42_RS08630	COG1256	bacterial-type flagellum assembly
JLF42_RS08645	COG0583	DNA-binding transcription factor activity
JLF42_RS08650	COG1530	ribonuclease E activity
JLF42_RS08655	COG0564	pseudouridine synthase activity
JLF42_RS08660	COG0424	maF-like protein
JLF42_RS08670	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JLF42_RS08675	COG0416	fatty acid biosynthetic process
JLF42_RS08680	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JLF42_RS08695	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JLF42_RS08700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLF42_RS08705	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JLF42_RS08710	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JLF42_RS08720	COG0470	DNA polymerase III
JLF42_RS08725	COG0084	hydrolase, TatD family'
JLF42_RS08735	COG0537	adenosine 5'-monophosphoramidase activity
JLF42_RS08740	COG5633	Lipoprotein
JLF42_RS08745	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
JLF42_RS08760	COG3150	esterase
JLF42_RS08765	COG1252	NADH dehydrogenase
JLF42_RS08770	COG3134	Outer membrane lipoprotein
JLF42_RS08775	COG1309	transcriptional regulator
JLF42_RS08785	COG1388	LysM domain
JLF42_RS08785	COG1376	ErfK ybiS ycfS ynhG family protein
JLF42_RS08790	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JLF42_RS08795	COG4763	Acyl-transferase
JLF42_RS08800	COG4591	ABC-type transport system involved in lipoprotein release permease component
JLF42_RS08805	COG1136	(ABC) transporter
JLF42_RS08810	COG4591	ABC-type transport system involved in lipoprotein release permease component
JLF42_RS08820	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JLF42_RS08825	COG0840	transmembrane signaling receptor activity
JLF42_RS08830	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JLF42_RS08860	COG1943	Transposase
JLF42_RS08865	COG3415	Transposase
JLF42_RS08865	COG2801	Transposase and inactivated derivatives
JLF42_RS08870	COG2850	peptidyl-arginine hydroxylation
JLF42_RS08885	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JLF42_RS08890	COG2915	High frequency lysogenization protein hflD homolog
JLF42_RS08905	COG1187	pseudouridine synthase activity
JLF42_RS08910	COG0538	isocitrate dehydrogenase activity
JLF42_RS08930	COG2200	EAL domain
JLF42_RS08935	COG2203	Gaf domain
JLF42_RS08935	COG3706	GGDEF domain
JLF42_RS08935	COG4251	negative regulation of phosphorylation
JLF42_RS08935	COG5001	Diguanylate cyclase
JLF42_RS08940	COG2261	transglycosylase associated protein
JLF42_RS08950	COG2199	diguanylate cyclase activity
JLF42_RS08950	COG2203	Gaf domain
JLF42_RS08955	COG3042	response to heat
JLF42_RS08965	COG3189	MarR family transcriptional regulator
JLF42_RS08970	COG0504	CTP synthase activity
JLF42_RS08975	COG2807	transmembrane transport
JLF42_RS08980	COG2207	Transcriptional regulator
JLF42_RS08985	COG2707	UPF0756 membrane protein
JLF42_RS08995	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JLF42_RS09000	COG0582	viral genome integration into host DNA
JLF42_RS09075	COG1846	Transcriptional regulator
JLF42_RS09135	COG3179	chitinase
JLF42_RS09170	COG1802	Transcriptional regulator
JLF42_RS09170	COG4626	Terminase
JLF42_RS09215	COG4386	tail sheath protein
JLF42_RS09260	COG3299	homolog of phage Mu protein gp47
JLF42_RS09265	COG3778	Protein conserved in bacteria
JLF42_RS09300	COG2718	Belongs to the UPF0229 family
JLF42_RS09305	COG2766	serine protein kinase
JLF42_RS09310	COG3713	MltA-interacting MipA family protein
JLF42_RS09330	COG3139	Protein of unknown function (DUF1315)
JLF42_RS09340	COG1335	isochorismatase
JLF42_RS09345	COG0252	asparaginase activity
JLF42_RS09350	COG0616	signal peptide processing
JLF42_RS09355	COG0778	Nitroreductase
JLF42_RS09360	COG0709	Synthesizes selenophosphate from selenide and ATP
JLF42_RS09365	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JLF42_RS09380	COG0494	nUDIX hydrolase
JLF42_RS09385	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLF42_RS09390	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JLF42_RS09395	COG2897	thiosulfate sulfurtransferase activity
JLF42_RS09400	COG4136	ATPase activity
JLF42_RS09405	COG4135	transport system, permease component
JLF42_RS09410	COG4134	Bacterial extracellular solute-binding protein
JLF42_RS09420	COG0708	Exodeoxyribonuclease III
JLF42_RS09430	COG3138	arginine N-succinyltransferase
JLF42_RS09435	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS09440	COG3724	N-succinylarginine dihydrolase activity
JLF42_RS09450	COG3678	ATP-independent chaperone mediated protein folding
JLF42_RS09460	COG0322	excinuclease ABC activity
JLF42_RS09465	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JLF42_RS09470	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLF42_RS09475	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS09480	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JLF42_RS09485	COG1447	Phosphotransferase system cellobiose-specific component IIA
JLF42_RS09490	COG2169	Transcriptional regulator
JLF42_RS09490	COG1917	Cupin 2, conserved barrel domain protein
JLF42_RS09495	COG1486	melibiose metabolic process
JLF42_RS09500	COG3394	polysaccharide catabolic process
JLF42_RS09505	COG0753	catalase activity
JLF42_RS09515	COG1823	symporter activity
JLF42_RS09520	COG1988	membrane-bound metal-dependent
JLF42_RS09525	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLF42_RS09535	COG3001	Fructosamine kinase
JLF42_RS09545	COG1105	Belongs to the carbohydrate kinase PfkB family
JLF42_RS09550	COG3137	Salt-induced outer membrane protein
JLF42_RS09565	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JLF42_RS09590	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JLF42_RS09595	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JLF42_RS09595	COG0072	phenylalanine-tRNA ligase activity
JLF42_RS09600	COG0776	regulation of translation
JLF42_RS09610	COG0386	Belongs to the glutathione peroxidase family
JLF42_RS09620	COG0791	NLP P60 protein
JLF42_RS09635	COG1472	Belongs to the glycosyl hydrolase 3 family
JLF42_RS09645	COG0628	permease
JLF42_RS09650	COG0247	lactate metabolic process
JLF42_RS09650	COG0277	FAD linked oxidase domain protein
JLF42_RS09655	COG2050	protein possibly involved in aromatic compounds catabolism
JLF42_RS09665	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JLF42_RS09670	COG3383	formate dehydrogenase (NAD+) activity
JLF42_RS09690	COG2200	EAL domain
JLF42_RS09695	COG0789	Transcriptional regulator
JLF42_RS09700	COG0316	Belongs to the HesB IscA family
JLF42_RS09705	COG0719	Fe-S assembly protein
JLF42_RS09710	COG0396	ATPase activity
JLF42_RS09715	COG0719	Fe-S assembly protein
JLF42_RS09720	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JLF42_RS09725	COG2166	iron-sulfur cluster assembly
JLF42_RS09730	COG1376	ErfK ybiS ycfS ynhG family protein
JLF42_RS09745	COG0626	cystathionine gamma-synthase activity
JLF42_RS09760	COG2011	ABC-type metal ion transport system permease component
JLF42_RS09765	COG1464	Belongs to the NlpA lipoprotein family
JLF42_RS09775	COG0765	amino acid transport
JLF42_RS09780	COG0765	amino acid transport
JLF42_RS09790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS09810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JLF42_RS09820	COG4529	Protein conserved in bacteria
JLF42_RS09835	COG0534	Mate efflux family protein
JLF42_RS09840	COG0307	riboflavin synthase, alpha
JLF42_RS09845	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JLF42_RS09850	COG2814	Major facilitator Superfamily
JLF42_RS09855	COG0583	DNA-binding transcription factor activity
JLF42_RS09870	COG2814	Major facilitator Superfamily
JLF42_RS09880	COG0791	NLP P60 protein
JLF42_RS09890	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JLF42_RS09895	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JLF42_RS09900	COG0346	lactoylglutathione lyase activity
JLF42_RS09905	COG1902	pentaerythritol trinitrate reductase activity
JLF42_RS09910	COG1309	transcriptional regulator
JLF42_RS09915	COG2194	sulfuric ester hydrolase activity
JLF42_RS09920	COG3313	Fe-S protein
JLF42_RS09925	COG4989	oxidoreductase activity
JLF42_RS09930	COG2032	superoxide dismutase activity
JLF42_RS09935	COG1289	transmembrane transporter activity
JLF42_RS09940	COG1566	PFAM secretion protein HlyD family protein
JLF42_RS09960	COG3706	GGDEF domain
JLF42_RS09970	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
JLF42_RS09975	COG3895	Periplasmic Protein
JLF42_RS09980	COG0259	pyridoxamine-phosphate oxidase activity
JLF42_RS09985	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JLF42_RS09990	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
JLF42_RS09995	COG0625	glutathione transferase activity
JLF42_RS10000	COG3104	oligopeptide transport
JLF42_RS10005	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JLF42_RS10055	COG0673	inositol 2-dehydrogenase activity
JLF42_RS10060	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JLF42_RS10065	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JLF42_RS10070	COG1263	PTS System
JLF42_RS10070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS10075	COG1609	Transcriptional regulator
JLF42_RS10080	COG5339	Protein conserved in bacteria
JLF42_RS10085	COG1482	cell wall glycoprotein biosynthetic process
JLF42_RS10090	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JLF42_RS10090	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JLF42_RS10095	COG0114	fumarate hydratase activity
JLF42_RS10105	COG2205	protein histidine kinase activity
JLF42_RS10115	COG0745	RESPONSE REGULATOR receiver
JLF42_RS10120	COG3136	membrane protein required for alginate biosynthesis
JLF42_RS10125	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS10130	COG0531	amino acid
JLF42_RS10140	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
JLF42_RS10145	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JLF42_RS10165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLF42_RS10170	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
JLF42_RS10175	COG1473	amidohydrolase
JLF42_RS10185	COG0583	DNA-binding transcription factor activity
JLF42_RS10190	COG2840	Smr protein MutS2
JLF42_RS10200	COG0667	Aldo Keto reductase
JLF42_RS10205	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JLF42_RS10215	COG0583	DNA-binding transcription factor activity
JLF42_RS10235	COG0583	DNA-binding transcription factor activity
JLF42_RS10240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLF42_RS10275	COG1403	HNH endonuclease
JLF42_RS10280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS10290	COG0628	permease
JLF42_RS10295	COG2076	Multidrug Resistance protein
JLF42_RS10300	COG2076	Multidrug Resistance protein
JLF42_RS10310	COG3591	Belongs to the peptidase S1B family
JLF42_RS10325	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JLF42_RS10335	COG2814	Major facilitator Superfamily
JLF42_RS10340	COG0583	DNA-binding transcription factor activity
JLF42_RS10345	COG1940	carbohydrate kinase activity
JLF42_RS10350	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JLF42_RS10410	COG4319	ketosteroid isomerase
JLF42_RS10430	COG3141	response to X-ray
JLF42_RS10435	COG3708	Transcriptional regulator
JLF42_RS10435	COG2207	Transcriptional regulator
JLF42_RS10440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS10460	COG0745	RESPONSE REGULATOR receiver
JLF42_RS10465	COG3713	MltA-interacting MipA family protein
JLF42_RS10485	COG3381	protein complex oligomerization
JLF42_RS10490	COG0243	molybdopterin cofactor binding
JLF42_RS10505	COG3415	Transposase
JLF42_RS10505	COG2801	Transposase and inactivated derivatives
JLF42_RS10510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS10520	COG1742	UPF0060 membrane protein
JLF42_RS10550	COG0246	Mannitol dehydrogenase
JLF42_RS10560	COG0589	response to stress
JLF42_RS10565	COG1802	Transcriptional regulator
JLF42_RS10570	COG4221	oxidoreductase activity
JLF42_RS10615	COG2200	EAL domain
JLF42_RS10620	COG0745	RESPONSE REGULATOR receiver
JLF42_RS10645	COG2801	Transposase and inactivated derivatives
JLF42_RS10645	COG3415	Transposase
JLF42_RS10650	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JLF42_RS10665	COG2911	Protein conserved in bacteria
JLF42_RS10675	COG3784	Protein of unknown function (DUF1318)
JLF42_RS10680	COG2207	Transcriptional regulator
JLF42_RS10685	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS10690	COG3415	Transposase
JLF42_RS10690	COG2801	Transposase and inactivated derivatives
JLF42_RS10695	COG4251	negative regulation of phosphorylation
JLF42_RS10695	COG5001	Diguanylate cyclase
JLF42_RS10695	COG3706	GGDEF domain
JLF42_RS10695	COG2203	Gaf domain
JLF42_RS10705	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS10705	COG2030	dehydratase
JLF42_RS10715	COG3396	Phenylacetate-CoA oxygenase
JLF42_RS10720	COG3460	Phenylacetate-CoA oxygenase
JLF42_RS10725	COG3396	Phenylacetate-CoA oxygenase
JLF42_RS10730	COG2151	metal-sulfur cluster biosynthetic enzyme
JLF42_RS10735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLF42_RS10740	COG1024	Enoyl-CoA hydratase
JLF42_RS10745	COG1024	Enoyl-CoA hydratase
JLF42_RS10750	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLF42_RS10755	COG2050	protein possibly involved in aromatic compounds catabolism
JLF42_RS10760	COG0183	Belongs to the thiolase family
JLF42_RS10765	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
JLF42_RS10770	COG3327	negative regulation of DNA-templated transcription, initiation
JLF42_RS10775	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLF42_RS10780	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JLF42_RS10785	COG0386	Belongs to the glutathione peroxidase family
JLF42_RS10795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLF42_RS10805	COG1396	sequence-specific DNA binding
JLF42_RS10815	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JLF42_RS10830	COG2807	transmembrane transport
JLF42_RS10835	COG1846	Transcriptional regulator
JLF42_RS10865	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLF42_RS10875	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS10890	COG0583	DNA-binding transcription factor activity
JLF42_RS10895	COG1902	pentaerythritol trinitrate reductase activity
JLF42_RS10900	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS10935	COG0346	lactoylglutathione lyase activity
JLF42_RS10960	COG0300	oxidoreductase activity
JLF42_RS10975	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JLF42_RS11035	COG3122	Protein conserved in bacteria
JLF42_RS11050	COG1643	Atp-dependent helicase
JLF42_RS11055	COG4122	O-methyltransferase activity
JLF42_RS11060	COG1538	Outer membrane efflux protein
JLF42_RS11075	COG0477	Major facilitator Superfamily
JLF42_RS11080	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JLF42_RS11085	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JLF42_RS11090	COG3038	cytochrome b561
JLF42_RS11095	COG3415	Transposase
JLF42_RS11095	COG2801	Transposase and inactivated derivatives
JLF42_RS11100	COG0673	inositol 2-dehydrogenase activity
JLF42_RS11105	COG1349	DNA-binding transcription factor activity
JLF42_RS11145	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JLF42_RS11155	COG0583	DNA-binding transcription factor activity
JLF42_RS11180	COG0840	transmembrane signaling receptor activity
JLF42_RS11190	COG0583	DNA-binding transcription factor activity
JLF42_RS11195	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS11200	COG3111	PFAM Bacterial OB fold (BOF) protein
JLF42_RS11210	COG2323	membrane
JLF42_RS11215	COG1546	Belongs to the CinA family
JLF42_RS11230	COG1294	oxidase, subunit
JLF42_RS11235	COG1271	oxidase subunit
JLF42_RS11240	COG3546	catalase activity
JLF42_RS11245	COG3685	Protein conserved in bacteria
JLF42_RS11255	COG3685	Protein conserved in bacteria
JLF42_RS11260	COG3729	General stress protein
JLF42_RS11265	COG5383	Protein conserved in bacteria
JLF42_RS11270	COG2272	Belongs to the type-B carboxylesterase lipase family
JLF42_RS11280	COG0436	Aminotransferase
JLF42_RS11290	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
JLF42_RS11295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS11300	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLF42_RS11305	COG0500	methyltransferase
JLF42_RS11310	COG2195	Cleaves the N-terminal amino acid of tripeptides
JLF42_RS11315	COG0747	negative chemotaxis
JLF42_RS11335	COG3135	benzoate transporter
JLF42_RS11340	COG1396	sequence-specific DNA binding
JLF42_RS11345	COG0826	peptidase U32
JLF42_RS11355	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JLF42_RS11370	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JLF42_RS11390	COG1129	ABC transporter
JLF42_RS11400	COG3443	Belongs to the bacterial solute-binding protein 9 family
JLF42_RS11405	COG2814	Major facilitator Superfamily
JLF42_RS11410	COG0697	spore germination
JLF42_RS11425	COG1846	Transcriptional regulator
JLF42_RS11435	COG2814	Major facilitator Superfamily
JLF42_RS11455	COG0583	DNA-binding transcription factor activity
JLF42_RS11460	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS11470	COG2066	Belongs to the glutaminase family
JLF42_RS11480	COG2199	diguanylate cyclase activity
JLF42_RS11485	COG3706	GGDEF domain
JLF42_RS11495	COG0246	Mannitol dehydrogenase
JLF42_RS11500	COG3781	membrane
JLF42_RS11530	COG0456	acetyltransferase
JLF42_RS11535	COG0596	Alpha beta hydrolase
JLF42_RS11565	COG2771	luxR family
JLF42_RS11570	COG0494	nUDIX hydrolase
JLF42_RS11575	COG1349	DNA-binding transcription factor activity
JLF42_RS11610	COG2801	Transposase and inactivated derivatives
JLF42_RS11620	COG2801	Transposase and inactivated derivatives
JLF42_RS11635	COG0667	Aldo Keto reductase
JLF42_RS11650	COG3550	peptidyl-serine autophosphorylation
JLF42_RS11675	COG0745	RESPONSE REGULATOR receiver
JLF42_RS11685	COG0583	DNA-binding transcription factor activity
JLF42_RS11690	COG2814	Major facilitator Superfamily
JLF42_RS11725	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JLF42_RS11735	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JLF42_RS11750	COG0583	DNA-binding transcription factor activity
JLF42_RS11755	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLF42_RS11765	COG1366	Belongs to the anti-sigma-factor antagonist family
JLF42_RS11810	COG0784	Response regulator, receiver
JLF42_RS11810	COG2205	protein histidine kinase activity
JLF42_RS11810	COG5002	protein histidine kinase activity
JLF42_RS11815	COG3250	beta-galactosidase activity
JLF42_RS11820	COG4628	conserved protein (DUF2132)
JLF42_RS11825	COG1649	PFAM Uncharacterised BCR, COG1649
JLF42_RS11830	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JLF42_RS11870	COG0840	transmembrane signaling receptor activity
JLF42_RS11900	COG2200	EAL domain
JLF42_RS11915	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
JLF42_RS11920	COG0747	negative chemotaxis
JLF42_RS11925	COG0601	transmembrane transport
JLF42_RS11930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS11935	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS11940	COG4608	Belongs to the ABC transporter superfamily
JLF42_RS11945	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS11955	COG1764	response to oxidative stress
JLF42_RS11985	COG0281	malic enzyme
JLF42_RS11990	COG0488	(ABC) transporter
JLF42_RS11995	COG1064	alcohol dehydrogenase
JLF42_RS12005	COG0601	transmembrane transport
JLF42_RS12010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS12020	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS12030	COG2814	Major facilitator Superfamily
JLF42_RS12040	COG2864	formate dehydrogenase
JLF42_RS12045	COG0437	4 iron, 4 sulfur cluster binding
JLF42_RS12070	COG0583	DNA-binding transcription factor activity
JLF42_RS12125	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JLF42_RS12130	COG1140	nitrate reductase beta subunit
JLF42_RS12135	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JLF42_RS12140	COG2181	nitrate reductase activity
JLF42_RS12150	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JLF42_RS12155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JLF42_RS12175	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JLF42_RS12180	COG0640	Transcriptional regulator
JLF42_RS12190	COG3493	citrate carrier protein
JLF42_RS12200	COG1560	Kdo2-lipid A biosynthetic process
JLF42_RS12205	COG1942	4-Oxalocrotonate Tautomerase
JLF42_RS12210	COG0625	glutathione transferase activity
JLF42_RS12215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS12220	COG1126	abc transporter atp-binding protein
JLF42_RS12225	COG0765	amino acid transport
JLF42_RS12235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS12240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS12245	COG1473	amidohydrolase
JLF42_RS12250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS12260	COG0840	transmembrane signaling receptor activity
JLF42_RS12285	COG4772	TonB-dependent receptor
JLF42_RS12290	COG1802	Transcriptional regulator
JLF42_RS12295	COG2130	NADP-dependent
JLF42_RS12305	COG1247	-acetyltransferase
JLF42_RS12310	COG3238	Protein conserved in bacteria
JLF42_RS12320	COG0747	negative chemotaxis
JLF42_RS12350	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS12355	COG1177	transmembrane transport
JLF42_RS12365	COG3842	ATPase activity
JLF42_RS12370	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JLF42_RS12380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLF42_RS12390	COG1271	oxidase subunit
JLF42_RS12395	COG1294	oxidase, subunit
JLF42_RS12405	COG3187	Heat shock protein
JLF42_RS12410	COG3042	response to heat
JLF42_RS12415	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JLF42_RS12415	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLF42_RS12415	COG1013	pyruvate-flavodoxin oxidoreductase activity
JLF42_RS12415	COG0674	pyruvate-flavodoxin oxidoreductase activity
JLF42_RS12420	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JLF42_RS12445	COG2200	EAL domain
JLF42_RS12460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS12490	COG0513	Belongs to the DEAD box helicase family
JLF42_RS12510	COG3706	GGDEF domain
JLF42_RS12520	COG0693	protein deglycase activity
JLF42_RS12530	COG4166	transmembrane transport
JLF42_RS12535	COG2866	Carboxypeptidase
JLF42_RS12540	COG4948	Mandelate Racemase Muconate Lactonizing
JLF42_RS12545	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JLF42_RS12560	COG3768	UPF0283 membrane protein
JLF42_RS12565	COG3106	COG3106 Predicted ATPase
JLF42_RS12570	COG1609	Transcriptional regulator
JLF42_RS12580	COG3842	ATPase activity
JLF42_RS12585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLF42_RS12590	COG1554	hydrolase, family 65, central catalytic
JLF42_RS12595	COG0673	inositol 2-dehydrogenase activity
JLF42_RS12600	COG1082	Xylose isomerase domain protein TIM barrel
JLF42_RS12605	COG1063	alcohol dehydrogenase
JLF42_RS12610	COG0395	ABC-type sugar transport system, permease component
JLF42_RS12615	COG1175	transmembrane transport
JLF42_RS12620	COG1653	transport
JLF42_RS12625	COG0366	Alpha amylase catalytic
JLF42_RS12635	COG1983	PspC domain protein
JLF42_RS12645	COG1842	Phage shock protein A
JLF42_RS12650	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JLF42_RS12670	COG4171	peptide transport system, permease
JLF42_RS12690	COG5002	protein histidine kinase activity
JLF42_RS12695	COG0745	RESPONSE REGULATOR receiver
JLF42_RS12705	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS12710	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JLF42_RS12715	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLF42_RS12715	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JLF42_RS12720	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
JLF42_RS12725	COG5001	Diguanylate cyclase
JLF42_RS12730	COG1024	Enoyl-CoA hydratase
JLF42_RS12740	COG1349	DNA-binding transcription factor activity
JLF42_RS12750	COG0023	Translation Initiation Factor
JLF42_RS12755	COG0284	orotidine-5'-phosphate decarboxylase activity
JLF42_RS12760	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JLF42_RS12765	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
JLF42_RS12770	COG0671	phosphoesterase, PA-phosphatase related
JLF42_RS12780	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JLF42_RS12810	COG0616	signal peptide processing
JLF42_RS12815	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS12820	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
JLF42_RS12830	COG0009	L-threonylcarbamoyladenylate synthase
JLF42_RS12835	COG0613	PHP domain protein
JLF42_RS12850	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JLF42_RS12850	COG0512	Glutamine amidotransferase of anthranilate synthase
JLF42_RS12860	COG0133	tryptophan synthase activity
JLF42_RS12865	COG0159	tryptophan synthase activity
JLF42_RS12870	COG2391	methyltransferase activity
JLF42_RS12875	COG0425	Belongs to the sulfur carrier protein TusA family
JLF42_RS12885	COG3047	cAMP biosynthetic process
JLF42_RS12890	COG0727	PFAM Uncharacterised protein family (UPF0153)
JLF42_RS12915	COG2350	Protein conserved in bacteria
JLF42_RS12925	COG1280	lysine exporter protein (LysE YggA)
JLF42_RS12940	COG3099	Belongs to the UPF0263 family
JLF42_RS12945	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JLF42_RS12950	COG4608	Belongs to the ABC transporter superfamily
JLF42_RS12955	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS12965	COG0601	transmembrane transport
JLF42_RS12975	COG2095	MarC family integral membrane protein
JLF42_RS12980	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS12980	COG1454	alcohol dehydrogenase
JLF42_RS12985	COG1435	thymidine kinase activity
JLF42_RS12995	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JLF42_RS13000	COG0745	RESPONSE REGULATOR receiver
JLF42_RS13005	COG1752	Esterase of the alpha-beta hydrolase superfamily
JLF42_RS13010	COG3012	SEC-C Motif Domain Protein
JLF42_RS13015	COG0788	formyltetrahydrofolate deformylase activity
JLF42_RS13030	COG1522	sequence-specific DNA binding
JLF42_RS13035	COG0697	spore germination
JLF42_RS13040	COG2181	nitrate reductase activity
JLF42_RS13045	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JLF42_RS13050	COG1140	nitrate reductase beta subunit
JLF42_RS13055	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JLF42_RS13060	COG2223	nitrite transmembrane transporter activity
JLF42_RS13065	COG3850	Histidine kinase
JLF42_RS13070	COG2197	response regulator
JLF42_RS13075	COG4932	domain protein
JLF42_RS13080	COG0243	molybdopterin cofactor binding
JLF42_RS13085	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JLF42_RS13085	COG2146	nitrite reductase [NAD(P)H] activity
JLF42_RS13090	COG1116	anion transmembrane transporter activity
JLF42_RS13100	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JLF42_RS13105	COG3707	response regulator
JLF42_RS13110	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JLF42_RS13115	COG0840	transmembrane signaling receptor activity
JLF42_RS13125	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JLF42_RS13130	COG4572	Cation transport regulator
JLF42_RS13135	COG0387	Pfam Sodium calcium exchanger
JLF42_RS13150	COG2890	protein-(glutamine-N5) methyltransferase activity
JLF42_RS13160	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JLF42_RS13165	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
JLF42_RS13170	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JLF42_RS13180	COG0659	secondary active sulfate transmembrane transporter activity
JLF42_RS13195	COG0193	aminoacyl-tRNA hydrolase activity
JLF42_RS13200	COG0012	GTP binding
JLF42_RS13260	COG0515	serine threonine protein kinase
JLF42_RS13370	COG0243	molybdopterin cofactor binding
JLF42_RS13375	COG0583	DNA-binding transcription factor activity
JLF42_RS13390	COG4977	sequence-specific DNA binding
JLF42_RS13400	COG2814	Major facilitator Superfamily
JLF42_RS13415	COG4774	siderophore transport
JLF42_RS13430	COG0741	lytic transglycosylase activity
JLF42_RS13435	COG1619	proteins homologs of microcin C7 resistance protein MccF
JLF42_RS13440	COG3263	regulation of cellular component size
JLF42_RS13445	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JLF42_RS13450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JLF42_RS13455	COG2719	SpoVR family
JLF42_RS13465	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLF42_RS13480	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLF42_RS13485	COG3100	YcgL domain-containing protein
JLF42_RS13490	COG0850	regulation of cytokinetic process
JLF42_RS13495	COG2894	cell division
JLF42_RS13500	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
JLF42_RS13505	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
JLF42_RS13510	COG0318	PFAM AMP-dependent synthetase and ligase
JLF42_RS13515	COG3065	identical protein binding
JLF42_RS13520	COG1214	PFAM Peptidase M22, glycoprotease
JLF42_RS13525	COG1199	ATP-dependent helicase activity
JLF42_RS13530	COG0251	oxidation-reduction process
JLF42_RS13540	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JLF42_RS13550	COG1760	l-serine dehydratase
JLF42_RS13555	COG2200	EAL domain
JLF42_RS13560	COG1253	flavin adenine dinucleotide binding
JLF42_RS13565	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS13565	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS13570	COG3715	PTS system
JLF42_RS13575	COG3716	PTS system mannose fructose sorbose family IID component
JLF42_RS13580	COG4811	Protein of unknown function (DUF986)
JLF42_RS13585	COG1971	Probably functions as a manganese efflux pump
JLF42_RS13590	COG2226	methyltransferase
JLF42_RS13595	COG0768	penicillin binding
JLF42_RS13630	COG1414	Transcriptional regulator
JLF42_RS13635	COG2814	Major facilitator Superfamily
JLF42_RS13640	COG0501	Belongs to the peptidase M48B family
JLF42_RS13655	COG1956	GAF domain-containing protein
JLF42_RS13660	COG2995	paraquat-inducible protein a
JLF42_RS13665	COG3008	intermembrane lipid transfer
JLF42_RS13670	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JLF42_RS13670	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
JLF42_RS13685	COG2990	Protein conserved in bacteria
JLF42_RS13700	COG1276	copper resistance
JLF42_RS13705	COG2372	response to copper ion
JLF42_RS13715	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JLF42_RS13720	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JLF42_RS13725	COG1770	oligopeptidase
JLF42_RS13730	COG2979	Protein of unknown function (DUF533)
JLF42_RS13740	COG0800	Aldolase
JLF42_RS13745	COG0129	dihydroxy-acid dehydratase activity
JLF42_RS13750	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JLF42_RS13755	COG1737	Transcriptional regulator
JLF42_RS13765	COG1560	Kdo2-lipid A biosynthetic process
JLF42_RS13770	COG0739	heme binding
JLF42_RS13775	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JLF42_RS13785	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLF42_RS13795	COG0632	four-way junction helicase activity
JLF42_RS13810	COG0494	nUDIX hydrolase
JLF42_RS13820	COG1335	isochorismatase
JLF42_RS13890	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JLF42_RS13900	COG3788	relative of glutathione S-transferase, MAPEG superfamily
JLF42_RS13905	COG2226	methyltransferase
JLF42_RS13910	COG0500	methyltransferase
JLF42_RS13915	COG3142	Participates in the control of copper homeostasis
JLF42_RS13920	COG3102	Protein conserved in bacteria
JLF42_RS13925	COG0018	arginyl-trna synthetase
JLF42_RS13950	COG0745	RESPONSE REGULATOR receiver
JLF42_RS13965	COG0840	transmembrane signaling receptor activity
JLF42_RS14000	COG1301	dicarboxylic acid transport
JLF42_RS14040	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
JLF42_RS14050	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS14060	COG1879	ABC-type sugar transport system periplasmic component
JLF42_RS14065	COG1528	Iron-storage protein
JLF42_RS14070	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JLF42_RS14090	COG1528	Iron-storage protein
JLF42_RS14100	COG0814	amino acid
JLF42_RS14105	COG3012	SEC-C Motif Domain Protein
JLF42_RS14105	COG3318	Belongs to the UPF0149 family
JLF42_RS14125	COG0411	ABC transporter
JLF42_RS14140	COG3416	Protein conserved in bacteria
JLF42_RS14170	COG2197	response regulator
JLF42_RS14185	COG2197	response regulator
JLF42_RS14195	COG2801	Transposase and inactivated derivatives
JLF42_RS14200	COG1126	abc transporter atp-binding protein
JLF42_RS14205	COG0765	amino acid transport
JLF42_RS14215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS14250	COG1216	Glycosyl transferase, family 2
JLF42_RS14250	COG0438	transferase activity, transferring glycosyl groups
JLF42_RS14280	COG0366	Alpha amylase catalytic
JLF42_RS14290	COG1677	Flagellar hook-basal body complex protein FliE
JLF42_RS14300	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JLF42_RS14310	COG1157	protein secretion by the type III secretion system
JLF42_RS14350	COG1987	bacterial-type flagellum assembly
JLF42_RS14360	COG2197	response regulator
JLF42_RS14385	COG5475	Uncharacterized small protein (DUF2158)
JLF42_RS14390	COG2354	Protein conserved in bacteria
JLF42_RS14395	COG0697	spore germination
JLF42_RS14400	COG3727	T/G mismatch-specific endonuclease activity
JLF42_RS14405	COG0270	DNA (cytosine-5-)-methyltransferase activity
JLF42_RS14410	COG1418	mRNA catabolic process
JLF42_RS14415	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
JLF42_RS14425	COG3290	protein histidine kinase activity
JLF42_RS14430	COG4565	transcriptional regulatory protein
JLF42_RS14450	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
JLF42_RS14450	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
JLF42_RS14475	COG0583	DNA-binding transcription factor activity
JLF42_RS14480	COG3046	protein related to deoxyribodipyrimidine photolyase
JLF42_RS14530	COG0251	oxidation-reduction process
JLF42_RS14565	COG1376	ErfK ybiS ycfS ynhG family protein
JLF42_RS14570	COG0477	Major facilitator Superfamily
JLF42_RS14575	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JLF42_RS14580	COG0006	proline dipeptidase activity
JLF42_RS14590	COG0534	Mate efflux family protein
JLF42_RS14610	COG1289	transmembrane transporter activity
JLF42_RS14615	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JLF42_RS14625	COG2925	Exonuclease
JLF42_RS14630	COG0531	amino acid
JLF42_RS14640	COG0583	DNA-binding transcription factor activity
JLF42_RS14645	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLF42_RS14655	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JLF42_RS14665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JLF42_RS14670	COG0131	Imidazoleglycerol-phosphate dehydratase
JLF42_RS14670	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JLF42_RS14675	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JLF42_RS14680	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JLF42_RS14690	COG0140	phosphoribosyl-ATP diphosphatase activity
JLF42_RS14690	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JLF42_RS14715	COG1216	Glycosyl transferase, family 2
JLF42_RS14715	COG0438	transferase activity, transferring glycosyl groups
JLF42_RS14730	COG1215	transferase activity, transferring glycosyl groups
JLF42_RS14740	COG1091	dTDP-4-dehydrorhamnose reductase activity
JLF42_RS14765	COG0438	transferase activity, transferring glycosyl groups
JLF42_RS14770	COG2327	Polysaccharide pyruvyl transferase
JLF42_RS14775	COG2244	polysaccharide biosynthetic process
JLF42_RS14780	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JLF42_RS14785	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JLF42_RS14795	COG0297	glycogen (starch) synthase activity
JLF42_RS14800	COG1051	belongs to the nudix hydrolase family
JLF42_RS14805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JLF42_RS14810	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
JLF42_RS14815	COG0110	maltose O-acetyltransferase activity
JLF42_RS14820	COG1216	Glycosyl transferase, family 2
JLF42_RS14830	COG0438	transferase activity, transferring glycosyl groups
JLF42_RS14835	COG1045	serine acetyltransferase
JLF42_RS14840	COG0463	Glycosyl transferase, family 2
JLF42_RS14845	COG3206	protein involved in exopolysaccharide biosynthesis
JLF42_RS14845	COG0489	protein tyrosine kinase activity
JLF42_RS14860	COG1253	flavin adenine dinucleotide binding
JLF42_RS14865	COG2982	Protein involved in outer membrane biogenesis
JLF42_RS14870	COG0717	Belongs to the dCTP deaminase family
JLF42_RS14880	COG3447	MASE1 domain protein
JLF42_RS14880	COG5001	Diguanylate cyclase
JLF42_RS14880	COG5002	protein histidine kinase activity
JLF42_RS14885	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JLF42_RS14890	COG0443	Heat shock 70 kDa protein
JLF42_RS14895	COG2801	Transposase and inactivated derivatives
JLF42_RS14895	COG3415	Transposase
JLF42_RS14905	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS14910	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS14915	COG0477	Major facilitator Superfamily
JLF42_RS14920	COG2205	protein histidine kinase activity
JLF42_RS14925	COG0745	RESPONSE REGULATOR receiver
JLF42_RS14930	COG0826	peptidase U32
JLF42_RS14935	COG1683	Conserved Protein
JLF42_RS14940	COG1597	lipid kinase activity
JLF42_RS14945	COG1830	Aldolase
JLF42_RS14950	COG2211	Major facilitator Superfamily
JLF42_RS14955	COG1397	ADP-ribosylglycohydrolase
JLF42_RS14960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLF42_RS14965	COG2188	Transcriptional regulator
JLF42_RS14970	COG0351	phosphomethylpyrimidine kinase
JLF42_RS14975	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JLF42_RS15015	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JLF42_RS15020	COG0076	glutamate decarboxylase activity
JLF42_RS15025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JLF42_RS15030	COG3206	protein involved in exopolysaccharide biosynthesis
JLF42_RS15030	COG0489	protein tyrosine kinase activity
JLF42_RS15035	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JLF42_RS15040	COG1596	polysaccharide export
JLF42_RS15045	COG5455	response to cobalt ion
JLF42_RS15055	COG0489	protein tyrosine kinase activity
JLF42_RS15065	COG4807	Protein conserved in bacteria
JLF42_RS15075	COG3275	phosphorelay sensor kinase activity
JLF42_RS15080	COG0789	Transcriptional regulator
JLF42_RS15090	COG1174	glycine betaine transport
JLF42_RS15095	COG1125	glycine betaine transport
JLF42_RS15100	COG1174	glycine betaine transport
JLF42_RS15105	COG1732	Glycine betaine
JLF42_RS15110	COG1472	Belongs to the glycosyl hydrolase 3 family
JLF42_RS15115	COG0277	FAD linked oxidase domain protein
JLF42_RS15125	COG1686	Belongs to the peptidase S11 family
JLF42_RS15135	COG0586	Pfam SNARE associated Golgi protein
JLF42_RS15140	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS15145	COG1538	Outer membrane efflux protein
JLF42_RS15150	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS15165	COG3659	wide pore channel activity
JLF42_RS15170	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JLF42_RS15190	COG1346	cytolysis
JLF42_RS15195	COG0295	cytidine deaminase activity
JLF42_RS15200	COG2949	membrane
JLF42_RS15215	COG1129	ABC transporter
JLF42_RS15230	COG2311	Membrane
JLF42_RS15240	COG0477	Major facilitator Superfamily
JLF42_RS15245	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JLF42_RS15250	COG2801	Transposase and inactivated derivatives
JLF42_RS15250	COG3415	Transposase
JLF42_RS15255	COG4771	TonB-dependent receptor
JLF42_RS15260	COG0833	amino acid
JLF42_RS15265	COG0583	DNA-binding transcription factor activity
JLF42_RS15270	COG2855	membrane
JLF42_RS15275	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JLF42_RS15280	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS15280	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JLF42_RS15280	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JLF42_RS15285	COG1105	Belongs to the carbohydrate kinase PfkB family
JLF42_RS15305	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JLF42_RS15310	COG1312	Catalyzes the dehydration of D-mannonate
JLF42_RS15315	COG0246	Mannitol dehydrogenase
JLF42_RS15320	COG0523	cobalamin synthesis protein
JLF42_RS15325	COG0671	phosphoesterase, PA-phosphatase related
JLF42_RS15330	COG0791	NLP P60 protein
JLF42_RS15335	COG2200	EAL domain
JLF42_RS15340	COG4166	transmembrane transport
JLF42_RS15345	COG4174	ABC transporter (Permease)
JLF42_RS15350	COG4239	(ABC) transporter, permease
JLF42_RS15355	COG4172	Belongs to the ABC transporter superfamily
JLF42_RS15365	COG2814	Major facilitator Superfamily
JLF42_RS15370	COG1187	pseudouridine synthase activity
JLF42_RS15375	COG1061	Type III restriction enzyme res subunit
JLF42_RS15385	COG3081	Nucleoid-associated protein
JLF42_RS15390	COG3082	Protein of unknown function (DUF1414)
JLF42_RS15495	COG4386	tail sheath protein
JLF42_RS15535	COG0616	signal peptide processing
JLF42_RS15575	COG3772	lysozyme
JLF42_RS15595	COG1403	HNH endonuclease
JLF42_RS15610	COG4725	Belongs to the MT-A70-like family
JLF42_RS15645	COG5532	Uncharacterized conserved protein (DUF2303)
JLF42_RS15650	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
JLF42_RS15715	COG3182	Iron-regulated membrane protein
JLF42_RS15725	COG0579	oxidoreductase
JLF42_RS15730	COG0659	secondary active sulfate transmembrane transporter activity
JLF42_RS15735	COG2239	Acts as a magnesium transporter
JLF42_RS15740	COG4615	Cyclic peptide transporter
JLF42_RS15745	COG3145	DNA-N1-methyladenine dioxygenase activity
JLF42_RS15750	COG2169	Transcriptional regulator
JLF42_RS15750	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLF42_RS15755	COG1477	protein flavinylation
JLF42_RS15770	COG2198	Histidine kinase
JLF42_RS15770	COG0642	Histidine kinase
JLF42_RS15780	COG0784	Response regulator, receiver
JLF42_RS15780	COG2205	protein histidine kinase activity
JLF42_RS15790	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JLF42_RS15805	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLF42_RS15810	COG0584	glycerophosphoryl diester phosphodiesterase
JLF42_RS15815	COG2271	Major facilitator Superfamily
JLF42_RS15820	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JLF42_RS15825	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
JLF42_RS15830	COG0247	lactate metabolic process
JLF42_RS15850	COG1441	menaquinone biosynthetic process
JLF42_RS15860	COG0596	Alpha beta hydrolase
JLF42_RS15865	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JLF42_RS15870	COG1169	isochorismate synthase
JLF42_RS15875	COG4575	ribosome binding
JLF42_RS15880	COG2153	protein acetylation
JLF42_RS15885	COG1234	tRNA 3'-trailer cleavage
JLF42_RS15890	COG0835	chemotaxis
JLF42_RS15890	COG0784	Response regulator, receiver
JLF42_RS15895	COG1007	ATP synthesis coupled electron transport
JLF42_RS15900	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLF42_RS15905	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JLF42_RS15910	COG0713	ATP synthesis coupled electron transport
JLF42_RS15915	COG0839	Belongs to the complex I subunit 6 family
JLF42_RS15925	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JLF42_RS15955	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLF42_RS15960	COG0583	DNA-binding transcription factor activity
JLF42_RS15970	COG0436	Aminotransferase
JLF42_RS15980	COG0471	metal ion transport
JLF42_RS15980	COG0490	domain, Protein
JLF42_RS15985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLF42_RS16010	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JLF42_RS16015	COG3959	Transketolase, thiamine diphosphate binding domain
JLF42_RS16020	COG3037	sugar-specific permease SgaT UlaA
JLF42_RS16030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS16035	COG1609	Transcriptional regulator
JLF42_RS16045	COG0622	Phosphoesterase
JLF42_RS16050	COG0625	glutathione transferase activity
JLF42_RS16055	COG0625	glutathione transferase activity
JLF42_RS16060	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JLF42_RS16065	COG1090	epimerase
JLF42_RS16070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS16075	COG4598	ABC transporter
JLF42_RS16080	COG4160	amino acid transport
JLF42_RS16090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS16100	COG0163	prenyltransferase activity
JLF42_RS16105	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JLF42_RS16110	COG1286	toxin biosynthetic process
JLF42_RS16115	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
JLF42_RS16120	COG0285	dihydrofolate synthase activity
JLF42_RS16130	COG0586	Pfam SNARE associated Golgi protein
JLF42_RS16135	COG0101	tRNA pseudouridine synthase activity
JLF42_RS16140	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JLF42_RS16160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLF42_RS16165	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JLF42_RS16165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JLF42_RS16175	COG3101	peptidyl-lysine hydroxylation
JLF42_RS16180	COG0730	response to heat
JLF42_RS16190	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JLF42_RS16200	COG2840	Smr protein MutS2
JLF42_RS16205	COG2062	phosphohistidine phosphatase, SixA
JLF42_RS16210	COG1024	Enoyl-CoA hydratase
JLF42_RS16210	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLF42_RS16220	COG3691	Protein conserved in bacteria
JLF42_RS16225	COG2067	long-chain fatty acid transport protein
JLF42_RS16260	COG1609	Transcriptional regulator
JLF42_RS16270	COG2223	nitrite transmembrane transporter activity
JLF42_RS16345	COG1358	cellular component organization or biogenesis
JLF42_RS16375	COG4245	von Willebrand factor, type A
JLF42_RS16380	COG4245	von Willebrand factor, type A
JLF42_RS16405	COG4372	Transposase
JLF42_RS16410	COG3436	PFAM IS66 Orf2 family protein
JLF42_RS16455	COG3596	GTP binding
JLF42_RS16460	COG2378	regulation of single-species biofilm formation
JLF42_RS16490	COG2003	Belongs to the UPF0758 family
JLF42_RS16535	COG1560	Kdo2-lipid A biosynthetic process
JLF42_RS16545	COG0436	Aminotransferase
JLF42_RS16550	COG3275	phosphorelay sensor kinase activity
JLF42_RS16555	COG3279	Response regulator of the LytR AlgR family
JLF42_RS16560	COG0837	glucose binding
JLF42_RS16570	COG3961	Belongs to the TPP enzyme family
JLF42_RS16575	COG0667	Aldo Keto reductase
JLF42_RS16585	COG1914	H( )-stimulated, divalent metal cation uptake system
JLF42_RS16605	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JLF42_RS16610	COG2199	diguanylate cyclase activity
JLF42_RS16610	COG2200	EAL domain
JLF42_RS16620	COG3415	Transposase
JLF42_RS16625	COG3415	Transposase
JLF42_RS16630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JLF42_RS16650	COG0583	DNA-binding transcription factor activity
JLF42_RS16655	COG0385	Bile acid
JLF42_RS16660	COG3530	Putative quorum-sensing-regulated virulence factor
JLF42_RS16670	COG3115	cell septum assembly
JLF42_RS16685	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS16710	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
JLF42_RS16715	COG4208	sulfate ABC transporter
JLF42_RS16720	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
JLF42_RS16725	COG4150	thiosulfate binding
JLF42_RS16730	COG2837	iron assimilation
JLF42_RS16750	COG0860	N-Acetylmuramoyl-L-alanine amidase
JLF42_RS16755	COG0408	coproporphyrinogen oxidase activity
JLF42_RS16770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JLF42_RS16775	COG5342	invasion associated locus B
JLF42_RS16780	COG0494	nUDIX hydrolase
JLF42_RS16785	COG0493	'glutamate synthase
JLF42_RS16785	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLF42_RS16790	COG3850	Histidine kinase
JLF42_RS16795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS16805	COG1393	Belongs to the ArsC family
JLF42_RS16810	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JLF42_RS16820	COG0400	carboxylic ester hydrolase activity
JLF42_RS16830	COG2321	neutral zinc metallopeptidase
JLF42_RS16840	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JLF42_RS16850	COG2716	regulation of RNA biosynthetic process
JLF42_RS16855	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JLF42_RS16860	COG0628	permease
JLF42_RS16865	COG4783	chaperone-mediated protein folding
JLF42_RS16870	COG1393	Belongs to the ArsC family
JLF42_RS16880	COG2233	PERMEase
JLF42_RS16885	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JLF42_RS16890	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS16895	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JLF42_RS16900	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JLF42_RS16915	COG2200	EAL domain
JLF42_RS16945	COG3718	enzyme involved in inositol metabolism
JLF42_RS16960	COG0673	inositol 2-dehydrogenase activity
JLF42_RS16965	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS16980	COG0673	inositol 2-dehydrogenase activity
JLF42_RS16985	COG3962	Belongs to the TPP enzyme family
JLF42_RS17020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JLF42_RS17035	COG0517	IMP dehydrogenase activity
JLF42_RS17035	COG0516	GMP reductase activity
JLF42_RS17040	COG1570	exodeoxyribonuclease VII activity
JLF42_RS17055	COG1645	bacterial-type flagellum-dependent swarming motility
JLF42_RS17070	COG1160	GTP binding
JLF42_RS17080	COG2976	Protein conserved in bacteria
JLF42_RS17085	COG0124	histidyl-tRNA synthetase
JLF42_RS17100	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JLF42_RS17120	COG0437	4 iron, 4 sulfur cluster binding
JLF42_RS17125	COG0243	molybdopterin cofactor binding
JLF42_RS17130	COG4953	penicillin-binding protein 1C
JLF42_RS17135	COG2373	Large extracellular alpha-helical protein
JLF42_RS17140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS17140	COG2190	(PTS) system
JLF42_RS17140	COG1263	PTS System
JLF42_RS17150	COG2897	thiosulfate sulfurtransferase activity
JLF42_RS17155	COG1737	Transcriptional regulator
JLF42_RS17165	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JLF42_RS17170	COG2975	iron-sulfur cluster assembly
JLF42_RS17175	COG0633	Ferredoxin
JLF42_RS17180	COG0443	Heat shock 70 kDa protein
JLF42_RS17185	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JLF42_RS17190	COG0316	Belongs to the HesB IscA family
JLF42_RS17195	COG0822	iron-sulfur transferase activity
JLF42_RS17200	COG1104	cysteine desulfurase activity
JLF42_RS17205	COG1959	2 iron, 2 sulfur cluster binding
JLF42_RS17220	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
JLF42_RS17230	COG3711	transcriptional antiterminator
JLF42_RS17235	COG2814	Major facilitator Superfamily
JLF42_RS17240	COG2259	Doxx family
JLF42_RS17250	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JLF42_RS17250	COG1017	nitric oxide dioxygenase activity
JLF42_RS17255	COG0347	Belongs to the P(II) protein family
JLF42_RS17260	COG2204	response regulator
JLF42_RS17265	COG3170	Tfp pilus assembly protein FimV
JLF42_RS17270	COG2205	protein histidine kinase activity
JLF42_RS17275	COG0047	phosphoribosylformylglycinamidine synthase activity
JLF42_RS17275	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JLF42_RS17280	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JLF42_RS17290	COG0560	Phosphoserine phosphatase
JLF42_RS17295	COG1263	PTS System
JLF42_RS17295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS17300	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JLF42_RS17305	COG1737	Transcriptional regulator
JLF42_RS17310	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLF42_RS17320	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
JLF42_RS17325	COG1381	Involved in DNA repair and RecF pathway recombination
JLF42_RS17340	COG0681	Belongs to the peptidase S26 family
JLF42_RS17350	COG3086	response to oxidative stress
JLF42_RS17360	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
JLF42_RS17375	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JLF42_RS17380	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JLF42_RS17385	COG0513	Belongs to the DEAD box helicase family
JLF42_RS17400	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JLF42_RS17405	COG3118	belongs to the thioredoxin family
JLF42_RS17410	COG3148	PFAM DTW domain containing protein
JLF42_RS17415	COG1042	CoA-binding domain protein
JLF42_RS17415	COG0045	succinate-CoA ligase (ADP-forming) activity
JLF42_RS17415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS17420	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JLF42_RS17425	COG5544	Lipoprotein
JLF42_RS17430	COG0477	Major facilitator Superfamily
JLF42_RS17455	COG0542	response to heat
JLF42_RS17470	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JLF42_RS17475	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JLF42_RS17485	COG0077	Prephenate dehydratase
JLF42_RS17485	COG1605	Chorismate mutase
JLF42_RS17495	COG0287	Prephenate dehydrogenase
JLF42_RS17495	COG1605	Chorismate mutase
JLF42_RS17515	COG2199	diguanylate cyclase activity
JLF42_RS17520	COG2885	chlorophyll binding
JLF42_RS17545	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JLF42_RS17555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JLF42_RS17560	COG4137	Cytochrome C assembly protein
JLF42_RS17565	COG4536	flavin adenine dinucleotide binding
JLF42_RS17575	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JLF42_RS17580	COG0497	DNA recombination
JLF42_RS17595	COG2867	negative regulation of translational initiation
JLF42_RS17610	COG0582	viral genome integration into host DNA
JLF42_RS17690	COG0582	viral genome integration into host DNA
JLF42_RS17700	COG3311	Transcriptional regulator
JLF42_RS17740	COG0071	Belongs to the small heat shock protein (HSP20) family
JLF42_RS17745	COG0542	response to heat
JLF42_RS17795	COG0501	Belongs to the peptidase M48B family
JLF42_RS17800	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JLF42_RS17815	COG3596	GTP binding
JLF42_RS17825	COG2378	regulation of single-species biofilm formation
JLF42_RS17835	COG2378	regulation of single-species biofilm formation
JLF42_RS17855	COG2003	Belongs to the UPF0758 family
JLF42_RS17915	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JLF42_RS17915	COG2169	Transcriptional regulator
JLF42_RS17970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS17980	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JLF42_RS17995	COG2226	methyltransferase
JLF42_RS18000	COG0402	S-adenosylhomocysteine deaminase activity
JLF42_RS18005	COG0549	Belongs to the carbamate kinase family
JLF42_RS18015	COG1304	FMN binding
JLF42_RS18020	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JLF42_RS18025	COG0666	response to abiotic stimulus
JLF42_RS18030	COG0583	DNA-binding transcription factor activity
JLF42_RS18035	COG0401	homolog of Blt101
JLF42_RS18040	COG0640	Transcriptional regulator
JLF42_RS18045	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLF42_RS18070	COG4575	ribosome binding
JLF42_RS18080	COG1780	Probably involved in ribonucleotide reductase function
JLF42_RS18085	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JLF42_RS18095	COG4175	Glycine betaine
JLF42_RS18100	COG4176	ABC-type proline glycine betaine transport system permease component
JLF42_RS18110	COG2814	Major facilitator Superfamily
JLF42_RS18115	COG1846	Transcriptional regulator
JLF42_RS18120	COG1566	PFAM secretion protein HlyD family protein
JLF42_RS18125	COG2814	Major facilitator Superfamily
JLF42_RS18130	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JLF42_RS18145	COG2918	glutathione biosynthetic process
JLF42_RS18150	COG1238	metal cluster binding
JLF42_RS18155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLF42_RS18185	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JLF42_RS18190	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JLF42_RS18205	COG1546	Belongs to the CinA family
JLF42_RS18215	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLF42_RS18225	COG2951	lytic endotransglycosylase activity
JLF42_RS18230	COG3730	PTS system glucitol sorbitol-specific
JLF42_RS18235	COG3732	PTS system glucitol sorbitol-specific
JLF42_RS18245	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS18250	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS18255	COG1349	DNA-binding transcription factor activity
JLF42_RS18265	COG3604	Transcriptional regulator
JLF42_RS18270	COG0426	domain, Protein
JLF42_RS18270	COG1773	rubredoxin
JLF42_RS18275	COG0446	pyridine nucleotide-disulphide oxidoreductase
JLF42_RS18280	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
JLF42_RS18285	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
JLF42_RS18290	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLF42_RS18295	COG1609	Transcriptional regulator
JLF42_RS18300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS18300	COG1263	PTS System
JLF42_RS18305	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS18310	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JLF42_RS18320	COG3260	NADH ubiquinone oxidoreductase 20
JLF42_RS18325	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JLF42_RS18330	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
JLF42_RS18330	COG3261	NADH dehydrogenase
JLF42_RS18335	COG0650	Formate hydrogenlyase subunit 4
JLF42_RS18340	COG0651	ATP synthesis coupled electron transport
JLF42_RS18345	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
JLF42_RS18355	COG0375	protein maturation
JLF42_RS18360	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JLF42_RS18365	COG0298	carbon dioxide binding
JLF42_RS18370	COG0409	Hydrogenase expression formation protein
JLF42_RS18375	COG0309	Hydrogenase expression formation protein (HypE)
JLF42_RS18390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS18395	COG1120	ATPase activity
JLF42_RS18415	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JLF42_RS18425	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLF42_RS18430	COG0163	prenyltransferase activity
JLF42_RS18460	COG4942	peptidase
JLF42_RS18460	COG1388	LysM domain
JLF42_RS18475	COG0585	pseudouridine synthase activity
JLF42_RS18485	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JLF42_RS18490	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JLF42_RS18500	COG0529	Catalyzes the synthesis of activated sulfate
JLF42_RS18520	COG2234	aminopeptidase activity
JLF42_RS18530	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JLF42_RS18535	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JLF42_RS18540	COG0720	synthase
JLF42_RS18545	COG0602	queuosine metabolic process
JLF42_RS18550	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JLF42_RS18555	COG1263	PTS System
JLF42_RS18555	COG2190	(PTS) system
JLF42_RS18555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JLF42_RS18560	COG1737	Transcriptional regulator
JLF42_RS18580	COG3956	TIGRFAM MazG family protein
JLF42_RS18585	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JLF42_RS18590	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLF42_RS18595	COG2205	protein histidine kinase activity
JLF42_RS18595	COG3850	Histidine kinase
JLF42_RS18595	COG3437	response regulator, receiver
JLF42_RS18595	COG4999	Histidine kinase
JLF42_RS18600	COG1929	Belongs to the glycerate kinase type-1 family
JLF42_RS18605	COG4948	Mandelate Racemase Muconate Lactonizing
JLF42_RS18610	COG4948	Mandelate Racemase Muconate Lactonizing
JLF42_RS18615	COG2271	Major facilitator Superfamily
JLF42_RS18620	COG0716	FMN binding
JLF42_RS18625	COG0564	pseudouridine synthase activity
JLF42_RS18630	COG3098	single-species biofilm formation
JLF42_RS18645	COG1611	Belongs to the LOG family
JLF42_RS18655	COG1760	l-serine dehydratase
JLF42_RS18665	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
JLF42_RS18670	COG2363	Small membrane protein
JLF42_RS18675	COG0583	DNA-binding transcription factor activity
JLF42_RS18685	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JLF42_RS18690	COG2166	iron-sulfur cluster assembly
JLF42_RS18695	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JLF42_RS18700	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JLF42_RS18710	COG0860	N-Acetylmuramoyl-L-alanine amidase
JLF42_RS18715	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JLF42_RS18715	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JLF42_RS18720	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JLF42_RS18725	COG1074	ATP-dependent DNA helicase activity
JLF42_RS18735	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JLF42_RS18740	COG4967	type IV pilus modification protein PilV
JLF42_RS18750	COG4795	General secretion pathway protein
JLF42_RS18755	COG2165	general secretion pathway protein
JLF42_RS18760	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JLF42_RS18765	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JLF42_RS18775	COG0494	nUDIX hydrolase
JLF42_RS18780	COG3066	DNA modification
JLF42_RS18790	COG0667	Aldo Keto reductase
JLF42_RS18795	COG2801	Transposase and inactivated derivatives
JLF42_RS18795	COG3415	Transposase
JLF42_RS18800	COG0477	Major facilitator Superfamily
JLF42_RS18805	COG0318	PFAM AMP-dependent synthetase and ligase
JLF42_RS18805	COG0204	Acyl-transferase
JLF42_RS18810	COG1609	Transcriptional regulator
JLF42_RS18820	COG1609	Transcriptional regulator
JLF42_RS18830	COG0583	DNA-binding transcription factor activity
JLF42_RS18835	COG1794	racemase activity, acting on amino acids and derivatives
JLF42_RS18840	COG2814	Major facilitator Superfamily
JLF42_RS18845	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS18855	COG0183	Belongs to the thiolase family
JLF42_RS18870	COG0814	amino acid
JLF42_RS18885	COG2388	GCN5-related N-acetyl-transferase
JLF42_RS18890	COG3592	Divergent 4Fe-4S mono-cluster
JLF42_RS18900	COG4565	transcriptional regulatory protein
JLF42_RS18915	COG3842	ATPase activity
JLF42_RS18925	COG3210	domain, Protein
JLF42_RS19030	COG4942	peptidase
JLF42_RS19035	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
JLF42_RS19040	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JLF42_RS19050	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JLF42_RS19060	COG4974	Belongs to the 'phage' integrase family
JLF42_RS19075	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JLF42_RS19080	COG0354	folic acid binding
JLF42_RS19085	COG1272	protein, Hemolysin III
JLF42_RS19090	COG1737	Transcriptional regulator
JLF42_RS19095	COG2723	6-phospho-beta-galactosidase activity
JLF42_RS19100	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS19105	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JLF42_RS19105	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JLF42_RS19115	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JLF42_RS19120	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLF42_RS19125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JLF42_RS19130	COG0006	proline dipeptidase activity
JLF42_RS19140	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JLF42_RS19150	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JLF42_RS19155	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JLF42_RS19160	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JLF42_RS19165	COG0583	DNA-binding transcription factor activity
JLF42_RS19170	COG2968	Membrane
JLF42_RS19175	COG1279	arginine transmembrane transporter activity
JLF42_RS19180	COG0668	transmembrane transport
JLF42_RS19185	COG0191	fructose-bisphosphate aldolase activity
JLF42_RS19195	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JLF42_RS19200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JLF42_RS19205	COG0501	Belongs to the peptidase M48B family
JLF42_RS19215	COG0010	Belongs to the arginase family
JLF42_RS19220	COG3539	Fimbrial protein
JLF42_RS19240	COG2831	hemolysin activation secretion protein
JLF42_RS19250	COG1166	arginine decarboxylase activity
JLF42_RS19280	COG2814	Major facilitator Superfamily
JLF42_RS19285	COG3091	SprT-like family
JLF42_RS19290	COG2356	endonuclease I
JLF42_RS19295	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JLF42_RS19310	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JLF42_RS19315	COG2805	Type II/IV secretion system protein
JLF42_RS19320	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JLF42_RS19325	COG0762	integral membrane protein
JLF42_RS19330	COG1872	DUF167
JLF42_RS19340	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JLF42_RS19350	COG3171	Protein conserved in bacteria
JLF42_RS19360	COG1194	a g-specific adenine glycosylase
JLF42_RS19370	COG0741	lytic transglycosylase activity
JLF42_RS19375	COG2211	Major facilitator Superfamily
JLF42_RS19380	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
JLF42_RS19400	COG3052	prosthetic group binding
JLF42_RS19410	COG0179	Fumarylacetoacetate (FAA) hydrolase
JLF42_RS19415	COG3493	citrate carrier protein
JLF42_RS19430	COG1982	Orn Lys Arg decarboxylase major
JLF42_RS19435	COG1811	Na channel or pump
JLF42_RS19445	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JLF42_RS19550	COG2059	Chromate
JLF42_RS19640	COG1196	nuclear chromosome segregation
JLF42_RS19790	COG0741	lytic transglycosylase activity
JLF42_RS19805	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JLF42_RS19850	COG1121	(ABC) transporter
JLF42_RS19855	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JLF42_RS19860	COG0803	Belongs to the bacterial solute-binding protein 9 family
JLF42_RS19875	COG0629	single-stranded DNA binding
JLF42_RS19930	COG0305	Participates in initiation and elongation during chromosome replication
JLF42_RS19955	COG0457	Tetratricopeptide repeat
JLF42_RS19960	COG1649	PFAM Uncharacterised BCR, COG1649
JLF42_RS19960	COG0726	polysaccharide deacetylase
JLF42_RS19965	COG1215	transferase activity, transferring glycosyl groups
JLF42_RS19975	COG0754	glutathionylspermidine amidase activity
JLF42_RS19980	COG4608	Belongs to the ABC transporter superfamily
JLF42_RS19985	COG0444	Belongs to the ABC transporter superfamily
JLF42_RS19990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JLF42_RS19995	COG0601	transmembrane transport
JLF42_RS20005	COG0625	glutathione transferase activity
JLF42_RS20065	COG0667	Aldo Keto reductase
JLF42_RS20070	COG2862	Uncharacterized protein family, UPF0114
JLF42_RS20090	COG0848	biopolymer transport protein
JLF42_RS20100	COG0626	cystathionine gamma-synthase activity
JLF42_RS20105	COG0586	Pfam SNARE associated Golgi protein
JLF42_RS20110	COG2207	Transcriptional regulator
JLF42_RS20115	COG1979	alcohol dehydrogenase
JLF42_RS20130	COG1032	radical SAM domain protein
JLF42_RS20135	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JLF42_RS20155	COG3111	PFAM Bacterial OB fold (BOF) protein
JLF42_RS20170	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLF42_RS20175	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JLF42_RS20190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS20195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JLF42_RS20200	COG1120	ATPase activity
JLF42_RS20205	COG4774	siderophore transport
JLF42_RS20210	COG0187	DNA topoisomerase II activity
JLF42_RS20215	COG3150	esterase
JLF42_RS20220	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JLF42_RS20225	COG3151	Protein conserved in bacteria
JLF42_RS20230	COG0494	nUDIX hydrolase
JLF42_RS20245	COG0754	glutathionylspermidine amidase activity
JLF42_RS20250	COG3384	dioxygenase
JLF42_RS20260	COG3539	Fimbrial protein
JLF42_RS20265	COG3188	usher protein
JLF42_RS20270	COG3121	Chaperone
JLF42_RS20275	COG3539	Fimbrial protein
JLF42_RS20280	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JLF42_RS20290	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JLF42_RS20290	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JLF42_RS20300	COG3025	triphosphatase activity
JLF42_RS20305	COG4991	sh3 domain protein
JLF42_RS20310	COG0617	tRNA 3'-terminal CCA addition
JLF42_RS20320	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JLF42_RS20330	COG0477	Major facilitator Superfamily
JLF42_RS20335	COG0829	nickel cation binding
JLF42_RS20340	COG0831	urea catabolic process
JLF42_RS20345	COG0832	Belongs to the urease beta subunit family
JLF42_RS20350	COG0804	urea catabolic process
JLF42_RS20355	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
JLF42_RS20365	COG0830	nickel cation binding
JLF42_RS20370	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JLF42_RS20380	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JLF42_RS20385	COG0358	DNA primase activity
JLF42_RS20395	COG3663	DNA glycosylase
JLF42_RS20450	COG3561	AntA/AntB antirepressor
JLF42_RS20465	COG0582	viral genome integration into host DNA
JLF42_RS20495	COG2375	cellular response to nickel ion
JLF42_RS20500	COG1695	Transcriptional regulator
JLF42_RS20505	COG0840	transmembrane signaling receptor activity
JLF42_RS20510	COG0840	transmembrane signaling receptor activity
JLF42_RS20515	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JLF42_RS20525	COG3539	Fimbrial protein
JLF42_RS20530	COG3121	Chaperone
JLF42_RS20535	COG3188	usher protein
JLF42_RS20540	COG3539	Fimbrial protein
JLF42_RS20545	COG3539	Fimbrial protein
JLF42_RS20555	COG3121	Chaperone
JLF42_RS20565	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JLF42_RS20570	COG1830	Aldolase
JLF42_RS20575	COG1879	ABC-type sugar transport system periplasmic component
JLF42_RS20580	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS20585	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS20590	COG1129	ABC transporter
JLF42_RS20595	COG2390	Transcriptional regulator
JLF42_RS20600	COG1070	Carbohydrate kinase
JLF42_RS20605	COG1902	pentaerythritol trinitrate reductase activity
JLF42_RS20605	COG0446	pyridine nucleotide-disulphide oxidoreductase
JLF42_RS20615	COG1451	nucleotide metabolic process
JLF42_RS20620	COG0673	inositol 2-dehydrogenase activity
JLF42_RS20625	COG0861	Integral membrane protein TerC family
JLF42_RS20635	COG2721	sulfolactate sulfo-lyase activity
JLF42_RS20645	COG2271	Major facilitator Superfamily
JLF42_RS20650	COG2186	Transcriptional regulator
JLF42_RS20655	COG0586	Pfam SNARE associated Golgi protein
JLF42_RS20665	COG1422	Protein of unknown function (DUF1090)
JLF42_RS20670	COG4575	ribosome binding
JLF42_RS20675	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
JLF42_RS20685	COG2259	Doxx family
JLF42_RS20690	COG0435	Glutathione S-transferase
JLF42_RS20695	COG3152	Membrane
JLF42_RS20700	COG0583	DNA-binding transcription factor activity
JLF42_RS20705	COG1741	Belongs to the pirin family
JLF42_RS20715	COG0814	amino acid
JLF42_RS20745	COG1882	Formate acetyltransferase
JLF42_RS20750	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JLF42_RS20755	COG0814	amino acid
JLF42_RS20760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JLF42_RS20780	COG0463	Glycosyl transferase, family 2
JLF42_RS20790	COG2084	Dehydrogenase
JLF42_RS20800	COG2721	sulfolactate sulfo-lyase activity
JLF42_RS20805	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JLF42_RS20810	COG3107	peptidoglycan biosynthetic process
JLF42_RS20815	COG0792	nuclease activity
JLF42_RS20820	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JLF42_RS20825	COG2823	Periplasmic or secreted lipoprotein
JLF42_RS20830	COG3415	Transposase
JLF42_RS20830	COG2801	Transposase and inactivated derivatives
JLF42_RS20835	COG0701	Predicted permease
JLF42_RS20840	COG0702	epimerase
JLF42_RS20845	COG0693	protein deglycase activity
JLF42_RS20850	COG3787	Belongs to the UPF0306 family
JLF42_RS20855	COG2827	Endonuclease containing a URI domain
JLF42_RS20860	COG3153	acetyltransferase
JLF42_RS20865	COG3154	lipid carrier protein
JLF42_RS20870	COG0826	peptidase U32
JLF42_RS20875	COG0826	peptidase U32
JLF42_RS20880	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JLF42_RS20885	COG0814	amino acid
JLF42_RS20890	COG0513	Belongs to the DEAD box helicase family
JLF42_RS20910	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JLF42_RS20915	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JLF42_RS20920	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JLF42_RS20945	COG0137	argininosuccinate synthase activity
JLF42_RS20955	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JLF42_RS20960	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JLF42_RS20965	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JLF42_RS20970	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JLF42_RS20975	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
JLF42_RS20980	COG1534	Rna-binding protein
JLF42_RS20990	COG2027	D-alanyl-D-alanine carboxypeptidase
JLF42_RS20995	COG0745	RESPONSE REGULATOR receiver
JLF42_RS21000	COG0642	Histidine kinase
JLF42_RS21005	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JLF42_RS21010	COG0697	spore germination
JLF42_RS21020	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JLF42_RS21025	COG0142	geranyltranstransferase activity
JLF42_RS21030	COG3423	Transcriptional regulator
JLF42_RS21035	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JLF42_RS21040	COG5007	Belongs to the BolA IbaG family
JLF42_RS21045	COG3113	response to antibiotic
JLF42_RS21050	COG2854	intermembrane phospholipid transfer
JLF42_RS21055	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JLF42_RS21060	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JLF42_RS21065	COG1127	ABC transporter
JLF42_RS21070	COG0530	calcium, potassium:sodium antiporter activity
JLF42_RS21080	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JLF42_RS21085	COG3117	lipopolysaccharide transmembrane transporter activity
JLF42_RS21090	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JLF42_RS21095	COG1137	ATPase activity
JLF42_RS21120	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JLF42_RS21130	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JLF42_RS21135	COG0784	Response regulator, receiver
JLF42_RS21135	COG2198	Histidine kinase
JLF42_RS21135	COG5002	protein histidine kinase activity
JLF42_RS21140	COG0795	lipopolysaccharide-transporting ATPase activity
JLF42_RS21145	COG0795	lipopolysaccharide-transporting ATPase activity
JLF42_RS21150	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JLF42_RS21155	COG2927	DNA polymerase III (CHI subunit)
JLF42_RS21170	COG1064	alcohol dehydrogenase
JLF42_RS21180	COG0433	COG0433 Predicted ATPase
JLF42_RS21185	COG1242	4 iron, 4 sulfur cluster binding
JLF42_RS21190	COG0069	glutamate synthase activity
JLF42_RS21190	COG0067	glutamate synthase
JLF42_RS21190	COG0070	glutamate synthase
JLF42_RS21195	COG0493	'glutamate synthase
JLF42_RS21205	COG3188	usher protein
JLF42_RS21210	COG3121	Chaperone
JLF42_RS21215	COG3539	Fimbrial protein
JLF42_RS21220	COG2969	positive regulation of protein catabolic process
JLF42_RS21225	COG0625	glutathione transferase activity
JLF42_RS21230	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JLF42_RS21240	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JLF42_RS21245	COG3105	Protein conserved in bacteria
JLF42_RS21250	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JLF42_RS21255	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JLF42_RS21260	COG0039	L-malate dehydrogenase activity
JLF42_RS21265	COG1438	arginine binding
JLF42_RS21280	COG2732	(Barnase) inhibitor
JLF42_RS21285	COG1012	belongs to the aldehyde dehydrogenase family
JLF42_RS21290	COG1289	transmembrane transporter activity
JLF42_RS21305	COG0583	DNA-binding transcription factor activity
JLF42_RS21310	COG3477	response to acidic pH
JLF42_RS21315	COG0312	modulator of DNA gyrase
JLF42_RS21320	COG3164	Protein of unknown function
JLF42_RS21335	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JLF42_RS21340	COG1792	Involved in formation and maintenance of cell shape
JLF42_RS21345	COG1077	Cell shape determining protein MreB Mrl
JLF42_RS21355	COG2200	EAL domain
JLF42_RS21355	COG2199	diguanylate cyclase activity
JLF42_RS21360	COG0604	alcohol dehydrogenase
JLF42_RS21370	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
JLF42_RS21375	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JLF42_RS21380	COG0511	ligase activity, forming carbon-carbon bonds
JLF42_RS21385	COG0439	Biotin carboxylase
JLF42_RS21390	COG3924	membrane
JLF42_RS21395	COG4145	pantothenate transmembrane transporter activity
JLF42_RS21430	COG1309	transcriptional regulator
JLF42_RS21435	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS21440	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JLF42_RS21450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JLF42_RS21455	COG4597	amino acid ABC transporter
JLF42_RS21460	COG0765	amino acid transport
JLF42_RS21465	COG1126	abc transporter atp-binding protein
JLF42_RS21500	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JLF42_RS21510	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JLF42_RS21515	COG0009	L-threonylcarbamoyladenylate synthase
JLF42_RS21520	COG0551	DNA topoisomerase type I activity
JLF42_RS21525	COG2922	Belongs to the Smg family
JLF42_RS21530	COG0758	DNA mediated transformation
JLF42_RS21535	COG0242	peptide deformylase activity
JLF42_RS21545	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JLF42_RS21545	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JLF42_RS21560	COG3036	rescue of stalled ribosome
JLF42_RS21565	COG0789	Transcriptional regulator
JLF42_RS21580	COG0202	RNA polymerase activity
JLF42_RS21590	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JLF42_RS21605	COG0201	protein transport
JLF42_RS21615	COG1841	ribosomal large subunit assembly
JLF42_RS21630	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JLF42_RS21635	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JLF42_RS21665	COG0255	Belongs to the universal ribosomal protein uL29 family
JLF42_RS21670	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JLF42_RS21710	COG0051	transcription antitermination factor activity, RNA binding
JLF42_RS21750	COG2168	tRNA wobble position uridine thiolation
JLF42_RS21755	COG2923	Belongs to the DsrF TusC family
JLF42_RS21760	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
JLF42_RS21765	COG2964	Protein conserved in bacteria
JLF42_RS21770	COG0545	Peptidyl-prolyl cis-trans isomerase
JLF42_RS21780	COG1047	Peptidyl-prolyl cis-trans
JLF42_RS21785	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JLF42_RS21790	COG0475	glutathione-regulated potassium exporter activity
JLF42_RS21790	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JLF42_RS21795	COG2249	NAD(P)H dehydrogenase (quinone) activity
JLF42_RS21800	COG0488	(ABC) transporter
JLF42_RS21810	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JLF42_RS21820	COG0679	Auxin Efflux Carrier
JLF42_RS21850	COG0429	hydrolase of the alpha beta-hydrolase fold
JLF42_RS21855	COG3089	Belongs to the UPF0270 family
JLF42_RS21860	COG3954	Phosphoribulokinase
JLF42_RS21865	COG1765	OsmC-like protein
JLF42_RS21875	COG1289	transmembrane transporter activity
JLF42_RS21885	COG0512	Glutamine amidotransferase of anthranilate synthase
JLF42_RS21890	COG2184	nucleotidyltransferase activity
JLF42_RS21900	COG0738	Major facilitator superfamily
JLF42_RS21905	COG0402	S-adenosylhomocysteine deaminase activity
JLF42_RS21910	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JLF42_RS21920	COG1648	precorrin-2 dehydrogenase activity
JLF42_RS21920	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JLF42_RS21930	COG0180	Tryptophanyl-tRNA synthetase
JLF42_RS21940	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JLF42_RS21945	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JLF42_RS21950	COG3266	domain, Protein
JLF42_RS21955	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JLF42_RS21960	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JLF42_RS21965	COG4796	Type ii and iii secretion system protein
JLF42_RS21990	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JLF42_RS21995	COG0494	nUDIX hydrolase
JLF42_RS22005	COG1011	Hydrolase
JLF42_RS22010	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JLF42_RS22015	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JLF42_RS22020	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JLF42_RS22035	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JLF42_RS22040	COG2183	response to ionizing radiation
JLF42_RS22045	COG1918	ferrous iron import across plasma membrane
JLF42_RS22065	COG1040	competence protein
JLF42_RS22075	COG2610	gluconate transmembrane transporter activity
JLF42_RS22080	COG1640	4-alpha-glucanotransferase
JLF42_RS22085	COG0058	SHG alpha-glucan phosphorylase activity
JLF42_RS22090	COG2909	trisaccharide binding
JLF42_RS22095	COG1349	DNA-binding transcription factor activity
JLF42_RS22100	COG0705	Rhomboid family
JLF42_RS22105	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JLF42_RS22110	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JLF42_RS22115	COG0058	SHG alpha-glucan phosphorylase activity
JLF42_RS22120	COG0297	glycogen (starch) synthase activity
JLF42_RS22125	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JLF42_RS22130	COG1523	belongs to the glycosyl hydrolase 13 family
JLF42_RS22135	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JLF42_RS22140	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JLF42_RS22145	COG2095	MarC family integral membrane protein
JLF42_RS22155	COG0425	Belongs to the sulfur carrier protein TusA family
JLF42_RS22160	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JLF42_RS22170	COG0477	Major facilitator Superfamily
JLF42_RS22175	COG0628	permease
JLF42_RS22205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JLF42_RS22215	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JLF42_RS22215	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JLF42_RS22225	COG1216	Glycosyl transferase, family 2
JLF42_RS22260	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS22265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JLF42_RS22310	COG3479	Phenolic acid decarboxylase
JLF42_RS22315	COG0583	DNA-binding transcription factor activity
JLF42_RS22320	COG1028	Short-chain dehydrogenase reductase Sdr
JLF42_RS22325	COG0791	NLP P60 protein
JLF42_RS22350	COG1414	Transcriptional regulator
JLF42_RS22355	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JLF42_RS22360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JLF42_RS22370	COG2205	protein histidine kinase activity
JLF42_RS22375	COG0745	RESPONSE REGULATOR receiver
JLF42_RS22380	COG1276	copper resistance
JLF42_RS22385	COG2372	response to copper ion
JLF42_RS22390	COG3667	copper resistance
JLF42_RS22395	COG2132	Multicopper oxidase
JLF42_RS22405	COG0739	heme binding
JLF42_RS22435	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JLF42_RS22505	COG2081	HI0933 family
JLF42_RS22510	COG0306	phosphate transporter
JLF42_RS22520	COG0589	response to stress
JLF42_RS22525	COG0742	ribosomal rna small subunit methyltransferase
JLF42_RS22530	COG0339	signal peptide processing
JLF42_RS22535	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JLF42_RS22540	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JLF42_RS22555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JLF42_RS22565	COG2197	response regulator
JLF42_RS22575	COG0583	DNA-binding transcription factor activity
JLF42_RS22580	COG1295	ribonuclease BN
JLF42_RS22585	COG0477	Major facilitator Superfamily
JLF42_RS22590	COG2982	Protein involved in outer membrane biogenesis
JLF42_RS22595	COG2200	EAL domain
JLF42_RS22605	COG0612	Peptidase, M16
JLF42_RS22610	COG1301	dicarboxylic acid transport
JLF42_RS22615	COG2199	diguanylate cyclase activity
JLF42_RS22615	COG2200	EAL domain
JLF42_RS22620	COG0457	Tetratricopeptide repeat
JLF42_RS22620	COG3118	belongs to the thioredoxin family
JLF42_RS22630	COG1215	transferase activity, transferring glycosyl groups
JLF42_RS22635	COG1215	transferase activity, transferring glycosyl groups
JLF42_RS22660	COG2194	sulfuric ester hydrolase activity
JLF42_RS22675	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JLF42_RS22715	COG1739	Uncharacterized protein family UPF0029
JLF42_RS22720	COG0006	proline dipeptidase activity
JLF42_RS22725	COG1250	3-hydroxyacyl-CoA dehydrogenase
JLF42_RS22725	COG1024	Enoyl-CoA hydratase
JLF42_RS22730	COG0183	Belongs to the thiolase family
JLF42_RS22740	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JLF42_RS22750	COG0084	hydrolase, TatD family'
JLF42_RS22755	COG0805	protein transport
JLF42_RS22760	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLF42_RS22765	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JLF42_RS22770	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
JLF42_RS22775	COG3165	ubiquinone biosynthetic process from chorismate
JLF42_RS22780	COG2226	methyltransferase
JLF42_RS22785	COG1322	Protein conserved in bacteria
JLF42_RS22795	COG0412	Dienelactone hydrolase
JLF42_RS22805	COG0583	DNA-binding transcription factor activity
JLF42_RS22810	COG0697	spore germination
JLF42_RS22815	COG0561	phosphatase activity
JLF42_RS22820	COG2267	carboxylic ester hydrolase activity
JLF42_RS22825	COG1280	lysine exporter protein (LysE YggA)
JLF42_RS22830	COG1280	lysine exporter protein (LysE YggA)
JLF42_RS22860	COG0210	DNA helicase
JLF42_RS22865	COG1011	Hydrolase
JLF42_RS22900	COG0181	hydroxymethylbilane synthase activity
JLF42_RS22910	COG2959	enzyme of heme biosynthesis
JLF42_RS22915	COG3071	HemY protein
JLF42_RS22950	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JLF42_RS22965	COG2244	polysaccharide biosynthetic process
JLF42_RS22970	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JLF42_RS22975	COG0456	acetyltransferase
JLF42_RS22980	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JLF42_RS22985	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JLF42_RS22995	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JLF42_RS23000	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JLF42_RS23005	COG3118	belongs to the thioredoxin family
JLF42_RS23015	COG0248	Ppx GppA phosphatase
JLF42_RS23025	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JLF42_RS23035	COG0583	DNA-binding transcription factor activity
JLF42_RS23040	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JLF42_RS23050	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JLF42_RS23055	COG3978	acetolactate synthase activity
JLF42_RS23080	COG3085	chromosome segregation
JLF42_RS23130	COG4206	TonB-dependent receptor
JLF42_RS23135	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JLF42_RS23155	COG0583	DNA-binding transcription factor activity
JLF42_RS23160	COG0165	Argininosuccinate lyase
JLF42_RS23165	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JLF42_RS23170	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JLF42_RS23175	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JLF42_RS23180	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JLF42_RS23185	COG2207	Transcriptional regulator
JLF42_RS23195	COG0371	Dehydrogenase
JLF42_RS23200	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JLF42_RS23210	COG0460	homoserine dehydrogenase
JLF42_RS23210	COG0527	aspartate kinase activity
JLF42_RS23215	COG0626	cystathionine gamma-synthase activity
JLF42_RS23225	COG0254	rRNA binding
JLF42_RS23230	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JLF42_RS23235	COG1609	Transcriptional regulator
JLF42_RS23240	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JLF42_RS23255	COG1575	Belongs to the MenA family. Type 1 subfamily
JLF42_RS23265	COG3074	FtsZ-dependent cytokinesis
JLF42_RS23275	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JLF42_RS23280	COG1494	fructose-1,6-bisphosphatase
JLF42_RS23290	COG3152	Membrane
JLF42_RS23300	COG0149	triose-phosphate isomerase activity
JLF42_RS23310	COG2134	cdp-diacylglycerol pyrophosphatase
JLF42_RS23320	COG0205	6-phosphofructokinase activity
JLF42_RS23330	COG3678	ATP-independent chaperone mediated protein folding
JLF42_RS23335	COG0745	RESPONSE REGULATOR receiver
JLF42_RS23340	COG2205	protein histidine kinase activity
JLF42_RS23345	COG2258	MOSC domain
JLF42_RS23350	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JLF42_RS23355	COG2211	Major facilitator Superfamily
JLF42_RS23375	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JLF42_RS23400	COG0437	4 iron, 4 sulfur cluster binding
JLF42_RS23405	COG2864	formate dehydrogenase
JLF42_RS23420	COG0456	acetyltransferase
JLF42_RS23435	COG1011	Hydrolase
JLF42_RS23450	COG2771	luxR family
JLF42_RS23460	COG1349	DNA-binding transcription factor activity
JLF42_RS23465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLF42_RS23475	COG3684	Belongs to the aldolase LacD family
JLF42_RS23485	COG1501	Belongs to the glycosyl hydrolase 31 family
JLF42_RS23500	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
JLF42_RS23515	COG3852	Histidine kinase
JLF42_RS23530	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JLF42_RS23535	COG3078	GTPase activator activity
JLF42_RS23550	COG0204	Acyl-transferase
JLF42_RS23560	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JLF42_RS23565	COG3084	Protein conserved in bacteria
JLF42_RS23570	COG0746	molybdenum cofactor guanylyltransferase activity
JLF42_RS23575	COG1763	Mo-molybdopterin cofactor biosynthetic process
JLF42_RS23600	COG2186	Transcriptional regulator
JLF42_RS23605	COG0477	Major facilitator Superfamily
JLF42_RS23610	COG1609	Transcriptional regulator
JLF42_RS23615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JLF42_RS23625	COG1172	Belongs to the binding-protein-dependent transport system permease family
JLF42_RS23630	COG1129	ABC transporter
JLF42_RS23635	COG1869	D-ribose catabolic process
JLF42_RS23640	COG3158	transport of potassium into the cell
JLF42_RS23650	COG2425	protein containing a von Willebrand factor type A (vWA) domain
JLF42_RS23655	COG2502	aspartate--ammonia ligase
JLF42_RS23660	COG1522	sequence-specific DNA binding
JLF42_RS23665	COG0716	FMN binding
JLF42_RS23670	COG0445	tRNA wobble uridine modification
JLF42_RS23675	COG0357	Ribosomal RNA small subunit methyltransferase G
JLF42_RS23680	COG3312	ion transport
JLF42_RS23685	COG0356	it plays a direct role in the translocation of protons across the membrane
JLF42_RS23695	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JLF42_RS23700	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JLF42_RS23715	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JLF42_RS23720	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JLF42_RS23725	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JLF42_RS23730	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JLF42_RS23740	COG3121	Chaperone
JLF42_RS23755	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JLF42_RS23760	COG0573	inorganic phosphate transmembrane transporter activity
JLF42_RS23765	COG0581	inorganic phosphate transmembrane transporter activity
JLF42_RS23770	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JLF42_RS23775	COG0704	Plays a role in the regulation of phosphate uptake
JLF42_RS23780	COG2382	esterase
JLF42_RS23785	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JLF42_RS23790	COG2252	PERMEase
JLF42_RS23795	COG0431	NADPH-dependent FMN reductase
JLF42_RS23800	COG2091	lysine biosynthetic process via aminoadipic acid
JLF42_RS23815	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JLF42_RS23820	COG0706	membrane insertase activity
JLF42_RS23860	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JLF42_RS23905	COG0625	glutathione transferase activity
JLF42_RS23935	COG4680	protein conserved in bacteria
JLF42_RS24020	COG2948	multi-organism process
JLF42_RS24030	COG0583	DNA-binding transcription factor activity
JLF42_RS24035	COG1846	Transcriptional regulator
JLF42_RS24055	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JLF42_RS24070	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JLF42_RS24080	COG0583	DNA-binding transcription factor activity
JLF42_RS24090	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JLF42_RS24095	COG0625	glutathione transferase activity
JLF42_RS24125	COG4644	lycopene metabolic process
JLF42_RS24140	COG2084	Dehydrogenase
JLF42_RS24145	COG1349	DNA-binding transcription factor activity
JLF42_RS24535	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLF42_RS24535	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JLF42_RS24575	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JLF42_RS24655	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JLF42_RS25010	COG0789	Transcriptional regulator
JLF42_RS25085	COG0732	type I restriction modification DNA specificity domain
JLF42_RS25090	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
JLF42_RS25105	COG2194	sulfuric ester hydrolase activity
JLF42_RS25110	COG4974	Belongs to the 'phage' integrase family
JLF42_RS25150	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JLF42_RS25160	COG0789	Transcriptional regulator
JLF42_RS25200	COG3077	Addiction module antitoxin, RelB DinJ family
JLF42_RS25260	COG0058	SHG alpha-glucan phosphorylase activity
JLF42_RS25265	COG0033	Phosphoglucomutase
JLF42_RS25285	COG2801	Transposase and inactivated derivatives
JLF42_RS25295	COG2801	Transposase and inactivated derivatives
JLF42_RS25305	COG2801	Transposase and inactivated derivatives
JLF42_RS25415	COG2135	peptidase activity
JLF42_RS25690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JLF42_RS25690	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JLF42_RS25775	COG4644	lycopene metabolic process