locus-tag	class	description
FOY93_RS00010	COG0592	DNA-directed DNA polymerase activity
FOY93_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOY93_RS00035	COG0561	phosphatase activity
FOY93_RS00040	COG2186	Transcriptional regulator
FOY93_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
FOY93_RS00050	COG0800	Aldolase
FOY93_RS00055	COG4948	Mandelate Racemase Muconate Lactonizing
FOY93_RS00060	COG2271	Major facilitator Superfamily
FOY93_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
FOY93_RS00070	COG5645	(Lipo)protein
FOY93_RS00080	COG0071	Belongs to the small heat shock protein (HSP20) family
FOY93_RS00085	COG2985	domain, Protein
FOY93_RS00090	COG2188	Transcriptional regulator
FOY93_RS00105	COG2149	membrane
FOY93_RS00120	COG2610	gluconate transmembrane transporter activity
FOY93_RS00125	COG0583	DNA-binding transcription factor activity
FOY93_RS00135	COG2814	Major facilitator Superfamily
FOY93_RS00160	COG0028	Belongs to the TPP enzyme family
FOY93_RS00165	COG0440	acetolactate synthase activity
FOY93_RS00170	COG2197	response regulator
FOY93_RS00200	COG2161	toxin-antitoxin pair type II binding
FOY93_RS00205	COG4115	mRNA cleavage
FOY93_RS00210	COG0697	spore germination
FOY93_RS00215	COG4580	involved in the transport of maltose and maltodextrins
FOY93_RS00220	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOY93_RS00225	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS00230	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS00230	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS00240	COG1609	Transcriptional regulator
FOY93_RS00250	COG0454	-acetyltransferase
FOY93_RS00255	COG1464	Belongs to the NlpA lipoprotein family
FOY93_RS00260	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOY93_RS00305	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOY93_RS00310	COG3272	Protein of unknown function (DUF1722)
FOY93_RS00315	COG2351	hydroxyisourate hydrolase activity
FOY93_RS00320	COG0789	Transcriptional regulator
FOY93_RS00335	COG3539	Fimbrial protein
FOY93_RS00345	COG3121	Chaperone
FOY93_RS00380	COG0519	Catalyzes the synthesis of GMP from XMP
FOY93_RS00465	COG0582	viral genome integration into host DNA
FOY93_RS00475	COG2211	Major facilitator Superfamily
FOY93_RS00480	COG1501	Belongs to the glycosyl hydrolase 31 family
FOY93_RS00485	COG2982	Protein involved in outer membrane biogenesis
FOY93_RS00490	COG2233	PERMEase
FOY93_RS00495	COG0786	glutamate:sodium symporter activity
FOY93_RS00500	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOY93_RS00505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY93_RS00510	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOY93_RS00525	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOY93_RS00530	COG2860	membrane
FOY93_RS00535	COG1561	YicC-like family, N-terminal region
FOY93_RS00545	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOY93_RS00560	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOY93_RS00565	COG2003	Belongs to the UPF0758 family
FOY93_RS00570	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOY93_RS00575	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOY93_RS00580	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOY93_RS00585	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOY93_RS00595	COG1519	Transferase
FOY93_RS00600	COG1216	Glycosyl transferase, family 2
FOY93_RS00605	COG0438	transferase activity, transferring glycosyl groups
FOY93_RS00615	COG0859	PFAM glycosyl transferase family 9
FOY93_RS00630	COG1215	transferase activity, transferring glycosyl groups
FOY93_RS00640	COG0859	PFAM glycosyl transferase family 9
FOY93_RS00645	COG0859	PFAM glycosyl transferase family 9
FOY93_RS00660	COG1063	alcohol dehydrogenase
FOY93_RS00675	COG0463	Glycosyl transferase, family 2
FOY93_RS00680	COG2861	carbohydrate metabolic process
FOY93_RS00685	COG4942	peptidase
FOY93_RS00690	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FOY93_RS00695	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY93_RS00700	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOY93_RS00705	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOY93_RS00710	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOY93_RS00720	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOY93_RS00725	COG2271	Major facilitator Superfamily
FOY93_RS00730	COG1304	FMN binding
FOY93_RS00735	COG2186	Transcriptional regulator
FOY93_RS00750	COG3722	fumarate hydratase activity
FOY93_RS00760	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS00760	COG2213	PTS system mannitol-specific
FOY93_RS00770	COG1566	PFAM secretion protein HlyD family protein
FOY93_RS00775	COG0625	glutathione transferase activity
FOY93_RS00785	COG3276	selenocysteine insertion sequence binding
FOY93_RS00790	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS00795	COG0583	DNA-binding transcription factor activity
FOY93_RS00800	COG3713	MltA-interacting MipA family protein
FOY93_RS00810	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY93_RS00830	COG3977	Valine--pyruvate aminotransferase
FOY93_RS00835	COG0366	Alpha amylase catalytic
FOY93_RS00840	COG2992	FlgJ-related protein
FOY93_RS00845	COG2207	Transcriptional regulator
FOY93_RS00845	COG1609	Transcriptional regulator
FOY93_RS00850	COG4214	carbohydrate transport
FOY93_RS00860	COG4213	ABC transporter substrate-binding protein
FOY93_RS00865	COG2115	Belongs to the xylose isomerase family
FOY93_RS00870	COG1070	Carbohydrate kinase
FOY93_RS00875	COG1335	isochorismatase
FOY93_RS00880	COG2169	Transcriptional regulator
FOY93_RS00885	COG3274	enterobacterial common antigen metabolic process
FOY93_RS00895	COG0752	glycyl-tRNA synthetase alpha subunit
FOY93_RS00900	COG0751	glycine-tRNA ligase activity
FOY93_RS00905	COG0488	(ABC) transporter
FOY93_RS00910	COG2944	sequence-specific DNA binding
FOY93_RS00920	COG1278	Cold shock
FOY93_RS00925	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY93_RS00935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY93_RS00945	COG1609	Transcriptional regulator
FOY93_RS00950	COG2885	chlorophyll binding
FOY93_RS00955	COG0243	molybdopterin cofactor binding
FOY93_RS00960	COG0456	acetyltransferase
FOY93_RS00965	COG2818	Glycosylase
FOY93_RS00970	COG5571	outer membrane autotransporter
FOY93_RS00975	COG2223	nitrite transmembrane transporter activity
FOY93_RS00980	COG2194	sulfuric ester hydrolase activity
FOY93_RS00990	COG0747	negative chemotaxis
FOY93_RS00995	COG0601	transmembrane transport
FOY93_RS01000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS01005	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS01010	COG4608	Belongs to the ABC transporter superfamily
FOY93_RS01015	COG1072	(Pantothenic acid kinase))
FOY93_RS01050	COG0250	Participates in transcription elongation, termination and antitermination
FOY93_RS01095	COG3706	GGDEF domain
FOY93_RS01105	COG2022	thiamine diphosphate biosynthetic process
FOY93_RS01110	COG2104	thiamine diphosphate biosynthetic process
FOY93_RS01115	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOY93_RS01130	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FOY93_RS01140	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOY93_RS01150	COG3068	Protein conserved in bacteria
FOY93_RS01165	COG0151	Belongs to the GarS family
FOY93_RS01200	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FOY93_RS01210	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOY93_RS01245	COG1187	pseudouridine synthase activity
FOY93_RS01260	COG4650	regulator
FOY93_RS01270	COG1690	Belongs to the RtcB family
FOY93_RS01275	COG3541	Predicted nucleotidyltransferase
FOY93_RS01280	COG0527	aspartate kinase activity
FOY93_RS01305	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY93_RS01310	COG3223	Belongs to the PsiE family
FOY93_RS01335	COG4580	involved in the transport of maltose and maltodextrins
FOY93_RS01345	COG3161	chorismate lyase activity
FOY93_RS01355	COG2217	Heavy metal translocating P-type atpase
FOY93_RS01360	COG3714	YhhN family
FOY93_RS01370	COG3776	membrane
FOY93_RS01375	COG0742	ribosomal rna small subunit methyltransferase
FOY93_RS01380	COG0552	protein localization to endoplasmic reticulum
FOY93_RS01385	COG2884	Cell division ATP-binding protein ftsE
FOY93_RS01390	COG2177	Part of the ABC transporter FtsEX involved in
FOY93_RS01395	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOY93_RS01400	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOY93_RS01420	COG0683	leucine binding
FOY93_RS01430	COG4177	L-phenylalanine transmembrane transporter activity
FOY93_RS01465	COG0584	glycerophosphoryl diester phosphodiesterase
FOY93_RS01475	COG0405	Gamma-glutamyltransferase
FOY93_RS01480	COG1247	-acetyltransferase
FOY93_RS01485	COG0673	inositol 2-dehydrogenase activity
FOY93_RS01490	COG1741	Belongs to the pirin family
FOY93_RS01495	COG1609	Transcriptional regulator
FOY93_RS01500	COG3265	gluconokinase activity
FOY93_RS01505	COG2610	gluconate transmembrane transporter activity
FOY93_RS01510	COG2937	Belongs to the GPAT DAPAT family
FOY93_RS01515	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOY93_RS01525	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY93_RS01530	COG0534	Mate efflux family protein
FOY93_RS01535	COG3237	CsbD-like
FOY93_RS01540	COG0735	belongs to the Fur family
FOY93_RS01555	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOY93_RS01565	COG0604	alcohol dehydrogenase
FOY93_RS01570	COG0305	Participates in initiation and elongation during chromosome replication
FOY93_RS01585	COG2197	response regulator
FOY93_RS01605	COG3772	lysozyme
FOY93_RS01620	COG1448	Aminotransferase
FOY93_RS01625	COG3700	Belongs to the class B bacterial acid phosphatase family
FOY93_RS01635	COG2315	Protein conserved in bacteria
FOY93_RS01645	COG0629	single-stranded DNA binding
FOY93_RS01655	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOY93_RS01665	COG0789	Transcriptional regulator
FOY93_RS01675	COG2252	PERMEase
FOY93_RS01680	COG0025	NhaP-type Na H and K H
FOY93_RS01685	COG0583	DNA-binding transcription factor activity
FOY93_RS01690	COG1380	Effector of murein hydrolase LrgA
FOY93_RS01695	COG1346	cytolysis
FOY93_RS01700	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOY93_RS01705	COG3162	membrane
FOY93_RS01710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOY93_RS01715	COG1301	dicarboxylic acid transport
FOY93_RS01720	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FOY93_RS01750	COG0191	fructose-bisphosphate aldolase activity
FOY93_RS01765	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS01770	COG1129	ABC transporter
FOY93_RS01775	COG4191	Histidine kinase
FOY93_RS01775	COG0784	Response regulator, receiver
FOY93_RS01785	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOY93_RS01790	COG0456	acetyltransferase
FOY93_RS01795	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOY93_RS01800	COG3454	Phosphonate metabolism
FOY93_RS01805	COG4778	phosphonate C-P lyase system protein PhnL
FOY93_RS01810	COG4107	phosphonate C-P lyase system protein PhnK
FOY93_RS01815	COG3627	carbon phosphorus lyase activity
FOY93_RS01820	COG3626	phosphonate metabolism
FOY93_RS01825	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FOY93_RS01830	COG3624	Phosphonate C-P lyase system protein PhnG
FOY93_RS01835	COG2188	Transcriptional regulator
FOY93_RS01840	COG3639	organic phosphonate transmembrane transporter activity
FOY93_RS01845	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FOY93_RS01855	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FOY93_RS01860	COG2824	Alkylphosphonate utilization operon protein PhnA
FOY93_RS01865	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
FOY93_RS01885	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY93_RS01930	COG1309	transcriptional regulator
FOY93_RS01945	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOY93_RS01950	COG1027	Aspartate ammonia-lyase
FOY93_RS01955	COG3030	protein affecting phage T7 exclusion by the F plasmid
FOY93_RS01960	COG0531	amino acid
FOY93_RS01970	COG0459	protein refolding
FOY93_RS01980	COG1509	lysine 2,3-aminomutase activity
FOY93_RS01985	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOY93_RS01990	COG5510	response to toxic substance
FOY93_RS02020	COG0583	DNA-binding transcription factor activity
FOY93_RS02025	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FOY93_RS02030	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FOY93_RS02035	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOY93_RS02040	COG1053	succinate dehydrogenase
FOY93_RS02045	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FOY93_RS02050	COG1511	domain protein
FOY93_RS02050	COG3264	Mechanosensitive ion channel
FOY93_RS02065	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOY93_RS02080	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOY93_RS02085	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOY93_RS02085	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOY93_RS02090	COG0802	atpase or kinase
FOY93_RS02100	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOY93_RS02105	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOY93_RS02110	COG1923	regulation of RNA biosynthetic process
FOY93_RS02115	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOY93_RS02120	COG0330	HflC and HflK could
FOY93_RS02125	COG0330	HflC and HflK could
FOY93_RS02130	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FOY93_RS02140	COG1959	2 iron, 2 sulfur cluster binding
FOY93_RS02145	COG0557	exoribonuclease II activity
FOY93_RS02150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY93_RS02155	COG0477	Major facilitator Superfamily
FOY93_RS02160	COG1960	acyl-CoA dehydrogenase activity
FOY93_RS02175	COG3650	response to hydrogen peroxide
FOY93_RS02180	COG1073	alpha beta
FOY93_RS02195	COG2965	DNA replication, synthesis of RNA primer
FOY93_RS02200	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOY93_RS02205	COG0359	binds to the 23S rRNA
FOY93_RS02210	COG3061	Opacity-associated protein A
FOY93_RS02215	COG0545	Peptidyl-prolyl cis-trans isomerase
FOY93_RS02220	COG1113	amino acid transport
FOY93_RS02230	COG0840	transmembrane signaling receptor activity
FOY93_RS02235	COG0697	spore germination
FOY93_RS02245	COG2207	Transcriptional regulator
FOY93_RS02255	COG0702	epimerase
FOY93_RS02260	COG1733	regulation of RNA biosynthetic process
FOY93_RS02270	COG1218	3'(2'),5'-bisphosphate nucleotidase
FOY93_RS02275	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FOY93_RS02285	COG1253	flavin adenine dinucleotide binding
FOY93_RS02290	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOY93_RS02295	COG0729	surface antigen
FOY93_RS02300	COG2911	Protein conserved in bacteria
FOY93_RS02305	COG2105	PFAM AIG2 family protein
FOY93_RS02330	COG1879	ABC-type sugar transport system periplasmic component
FOY93_RS02335	COG1129	ABC transporter
FOY93_RS02340	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS02345	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS02355	COG0583	DNA-binding transcription factor activity
FOY93_RS02365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOY93_RS02370	COG3028	Belongs to the UPF0307 family
FOY93_RS02375	COG0312	modulator of DNA gyrase
FOY93_RS02410	COG3964	amidohydrolase
FOY93_RS02430	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS02430	COG3711	transcriptional antiterminator
FOY93_RS02435	COG0602	queuosine metabolic process
FOY93_RS02445	COG0366	Alpha amylase catalytic
FOY93_RS02450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS02450	COG1263	PTS System
FOY93_RS02465	COG3525	Glycosyl hydrolase, family 20, catalytic domain
FOY93_RS02470	COG0251	oxidation-reduction process
FOY93_RS02480	COG0540	Belongs to the ATCase OTCase family
FOY93_RS02495	COG1438	arginine binding
FOY93_RS02500	COG1288	antiporter activity
FOY93_RS02515	COG2235	arginine
FOY93_RS02520	COG2731	YhcH YjgK YiaL family protein
FOY93_RS02525	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOY93_RS02530	COG0129	dihydroxy-acid dehydratase activity
FOY93_RS02535	COG2211	Major facilitator Superfamily
FOY93_RS02540	COG3507	Belongs to the glycosyl hydrolase 43 family
FOY93_RS02545	COG1414	Transcriptional regulator
FOY93_RS02560	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOY93_RS02585	COG0582	viral genome integration into host DNA
FOY93_RS02710	COG1335	isochorismatase
FOY93_RS02730	COG4191	Histidine kinase
FOY93_RS02740	COG0740	serine-type endopeptidase activity
FOY93_RS02775	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOY93_RS02785	COG1136	(ABC) transporter
FOY93_RS02820	COG2850	peptidyl-arginine hydroxylation
FOY93_RS02825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY93_RS02830	COG5457	Domain of unknown function (DUF1127)
FOY93_RS02840	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY93_RS02845	COG0583	DNA-binding transcription factor activity
FOY93_RS02850	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS02865	COG0640	Transcriptional regulator
FOY93_RS02885	COG2733	membrane
FOY93_RS02900	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS02915	COG0523	cobalamin synthesis protein
FOY93_RS02920	COG2879	small protein
FOY93_RS02925	COG1966	Carbon starvation protein
FOY93_RS02935	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY93_RS02940	COG2368	4-hydroxyphenylacetate
FOY93_RS02960	COG3971	2-oxopent-4-enoate hydratase activity
FOY93_RS02970	COG3384	dioxygenase
FOY93_RS02975	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS02980	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY93_RS02985	COG1846	Transcriptional regulator
FOY93_RS02990	COG0840	transmembrane signaling receptor activity
FOY93_RS03050	COG1484	DNA-dependent DNA replication
FOY93_RS03060	COG1764	response to oxidative stress
FOY93_RS03065	COG1846	Transcriptional regulator
FOY93_RS03070	COG1309	transcriptional regulator
FOY93_RS03075	COG3610	response to peptide
FOY93_RS03080	COG2966	Psort location CytoplasmicMembrane, score
FOY93_RS03085	COG2197	response regulator
FOY93_RS03090	COG2197	response regulator
FOY93_RS03095	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY93_RS03100	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS03105	COG4114	ferric iron reductase
FOY93_RS03125	COG2813	Specifically methylates the guanine in position
FOY93_RS03130	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
FOY93_RS03135	COG0456	acetyltransferase
FOY93_RS03140	COG1011	Hydrolase
FOY93_RS03145	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOY93_RS03150	COG2823	Periplasmic or secreted lipoprotein
FOY93_RS03155	COG5487	UPF0391 membrane protein
FOY93_RS03160	COG4667	esterase of the alpha-beta hydrolase superfamily
FOY93_RS03165	COG0084	hydrolase, TatD family'
FOY93_RS03170	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY93_RS03175	COG1328	CTP reductase activity
FOY93_RS03185	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOY93_RS03195	COG0813	purine-nucleoside phosphorylase activity
FOY93_RS03205	COG3726	membrane protein affecting hemolysin expression
FOY93_RS03210	COG0560	Phosphoserine phosphatase
FOY93_RS03215	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FOY93_RS03225	COG0604	alcohol dehydrogenase
FOY93_RS03235	COG0488	(ABC) transporter
FOY93_RS03240	COG0741	lytic transglycosylase activity
FOY93_RS03245	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
FOY93_RS03250	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FOY93_RS03255	COG0406	alpha-ribazole phosphatase activity
FOY93_RS03260	COG3708	Transcriptional regulator
FOY93_RS03260	COG2207	Transcriptional regulator
FOY93_RS03265	COG3045	CreA protein
FOY93_RS03270	COG0745	RESPONSE REGULATOR receiver
FOY93_RS03280	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FOY93_RS03290	COG0460	homoserine dehydrogenase
FOY93_RS03290	COG0527	aspartate kinase activity
FOY93_RS03300	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FOY93_RS03310	COG3022	response to hydroperoxide
FOY93_RS03315	COG1115	amino acid carrier protein
FOY93_RS03325	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOY93_RS03330	COG0477	Major facilitator Superfamily
FOY93_RS03335	COG1584	GPR1 FUN34 yaaH family protein
FOY93_RS03350	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOY93_RS03355	COG0583	DNA-binding transcription factor activity
FOY93_RS03360	COG0268	Binds directly to 16S ribosomal RNA
FOY93_RS03375	COG0196	riboflavin kinase activity
FOY93_RS03390	COG1047	Peptidyl-prolyl cis-trans
FOY93_RS03395	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOY93_RS03400	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FOY93_RS03405	COG0505	Belongs to the CarA family
FOY93_RS03420	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS03425	COG0475	glutathione-regulated potassium exporter activity
FOY93_RS03425	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY93_RS03435	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOY93_RS03440	COG2967	ApaG domain
FOY93_RS03450	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOY93_RS03460	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FOY93_RS03465	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOY93_RS03470	COG0564	pseudouridine synthase activity
FOY93_RS03475	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FOY93_RS03480	COG0417	DNA replication proofreading
FOY93_RS03485	COG0235	Class ii aldolase
FOY93_RS03490	COG2160	L-arabinose isomerase activity
FOY93_RS03495	COG1069	ribulokinase activity
FOY93_RS03505	COG0586	Pfam SNARE associated Golgi protein
FOY93_RS03515	COG1178	ABC-type Fe3 transport system permease component
FOY93_RS03535	COG2814	Major facilitator Superfamily
FOY93_RS03545	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FOY93_RS03565	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOY93_RS03580	COG0028	Belongs to the TPP enzyme family
FOY93_RS03590	COG1609	Transcriptional regulator
FOY93_RS03595	COG2001	Belongs to the MraZ family
FOY93_RS03610	COG0768	penicillin binding
FOY93_RS03615	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOY93_RS03620	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOY93_RS03625	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOY93_RS03635	COG0772	Belongs to the SEDS family
FOY93_RS03650	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOY93_RS03660	COG0849	cell division
FOY93_RS03665	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOY93_RS03670	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FOY93_RS03680	COG0653	protein targeting
FOY93_RS03685	COG0494	nUDIX hydrolase
FOY93_RS03695	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOY93_RS03705	COG0516	GMP reductase activity
FOY93_RS03710	COG1459	type II secretion system
FOY93_RS03715	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOY93_RS03720	COG4969	Belongs to the N-Me-Phe pilin family
FOY93_RS03730	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOY93_RS03735	COG3725	Membrane protein required for beta-lactamase induction
FOY93_RS03740	COG3940	Belongs to the glycosyl hydrolase 43 family
FOY93_RS03745	COG2211	Major facilitator Superfamily
FOY93_RS03750	COG1113	amino acid transport
FOY93_RS03760	COG2186	Transcriptional regulator
FOY93_RS03765	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOY93_RS03770	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOY93_RS03775	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOY93_RS03785	COG3064	Membrane
FOY93_RS03790	COG1049	propionate catabolic process, 2-methylcitrate cycle
FOY93_RS03800	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOY93_RS03805	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOY93_RS03820	COG4993	Dehydrogenase
FOY93_RS03830	COG0288	reversible hydration of carbon dioxide
FOY93_RS03835	COG1131	(ABC) transporter
FOY93_RS03840	COG0842	Transport permease protein
FOY93_RS03845	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS03850	COG0726	polysaccharide deacetylase
FOY93_RS03855	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
FOY93_RS03860	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOY93_RS03865	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOY93_RS03870	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FOY93_RS03875	COG0617	tRNA 3'-terminal CCA addition
FOY93_RS03880	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY93_RS03890	COG1489	DNA binding
FOY93_RS03895	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FOY93_RS03900	COG1643	Atp-dependent helicase
FOY93_RS03905	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOY93_RS03910	COG4774	siderophore transport
FOY93_RS03915	COG1120	ATPase activity
FOY93_RS03920	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOY93_RS03925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS03930	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOY93_RS03945	COG2860	membrane
FOY93_RS03955	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOY93_RS03960	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOY93_RS03970	COG3835	regulator
FOY93_RS04000	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOY93_RS04015	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOY93_RS04025	COG0575	Belongs to the CDS family
FOY93_RS04030	COG0750	zinc metalloprotease
FOY93_RS04035	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY93_RS04045	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY93_RS04050	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOY93_RS04055	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY93_RS04060	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY93_RS04065	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOY93_RS04080	COG1982	Orn Lys Arg decarboxylase major
FOY93_RS04085	COG0346	lactoylglutathione lyase activity
FOY93_RS04090	COG0037	tRNA processing
FOY93_RS04095	COG4568	rho-dependent transcription termination
FOY93_RS04110	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FOY93_RS04115	COG3015	lipoprotein NlpE involved in copper resistance
FOY93_RS04125	COG1720	tRNA m6t6A37 methyltransferase activity
FOY93_RS04135	COG1464	Belongs to the NlpA lipoprotein family
FOY93_RS04140	COG2011	ABC-type metal ion transport system permease component
FOY93_RS04150	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOY93_RS04190	COG0583	DNA-binding transcription factor activity
FOY93_RS04195	COG2814	Major facilitator Superfamily
FOY93_RS04200	COG3021	interspecies interaction between organisms
FOY93_RS04205	COG2226	methyltransferase
FOY93_RS04210	COG1388	LysM domain
FOY93_RS04210	COG0741	lytic transglycosylase activity
FOY93_RS04215	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY93_RS04220	COG2226	methyltransferase
FOY93_RS04245	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS04250	COG4608	Belongs to the ABC transporter superfamily
FOY93_RS04265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS04275	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY93_RS04280	COG1960	acyl-CoA dehydrogenase activity
FOY93_RS04290	COG0121	glutamine amidotransferase
FOY93_RS04295	COG3034	peptidoglycan biosynthetic process
FOY93_RS04310	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOY93_RS04315	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FOY93_RS04330	COG2991	Protein conserved in bacteria
FOY93_RS04335	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOY93_RS04340	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOY93_RS04350	COG1073	alpha beta
FOY93_RS04360	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY93_RS04365	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOY93_RS04370	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOY93_RS04380	COG0582	viral genome integration into host DNA
FOY93_RS04450	COG3723	Recombinational DNA repair protein, rece pathway
FOY93_RS04495	COG0305	Participates in initiation and elongation during chromosome replication
FOY93_RS04790	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOY93_RS04800	COG3121	Chaperone
FOY93_RS04820	COG3188	usher protein
FOY93_RS04825	COG3539	Fimbrial protein
FOY93_RS04850	COG5001	Diguanylate cyclase
FOY93_RS04850	COG3300	MHYT domain
FOY93_RS04880	COG0583	DNA-binding transcription factor activity
FOY93_RS04895	COG0628	permease
FOY93_RS04900	COG0833	amino acid
FOY93_RS04905	COG2040	homocysteine
FOY93_RS04910	COG4521	taurine ABC transporter
FOY93_RS04915	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOY93_RS04920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOY93_RS04925	COG2175	clavaminate synthase activity
FOY93_RS04935	COG0113	porphobilinogen synthase activity
FOY93_RS04940	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOY93_RS04950	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FOY93_RS04970	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOY93_RS04990	COG1785	Belongs to the alkaline phosphatase family
FOY93_RS05000	COG3706	GGDEF domain
FOY93_RS05005	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOY93_RS05010	COG1671	Belongs to the UPF0178 family
FOY93_RS05015	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOY93_RS05025	COG4126	flavin adenine dinucleotide binding
FOY93_RS05030	COG3123	guanosine phosphorylase activity
FOY93_RS05040	COG1940	carbohydrate kinase activity
FOY93_RS05045	COG0419	ATPase involved in DNA repair
FOY93_RS05050	COG0420	3'-5' exonuclease activity
FOY93_RS05060	COG5002	protein histidine kinase activity
FOY93_RS05075	COG0366	Alpha amylase catalytic
FOY93_RS05090	COG0450	alkyl hydroperoxide reductase
FOY93_RS05095	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FOY93_RS05110	COG1862	Preprotein translocase
FOY93_RS05115	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOY93_RS05120	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOY93_RS05135	COG3248	Nucleoside-binding outer membrane protein
FOY93_RS05140	COG4238	major outer membrane lipoprotein
FOY93_RS05145	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOY93_RS05150	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOY93_RS05150	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOY93_RS05155	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOY93_RS05160	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOY93_RS05165	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FOY93_RS05170	COG0667	Aldo Keto reductase
FOY93_RS05175	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FOY93_RS05180	COG0142	geranyltranstransferase activity
FOY93_RS05195	COG0693	protein deglycase activity
FOY93_RS05200	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOY93_RS05210	COG2814	Major facilitator Superfamily
FOY93_RS05215	COG0109	protoheme IX farnesyltransferase activity
FOY93_RS05220	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOY93_RS05225	COG1845	cytochrome c oxidase, subunit III
FOY93_RS05230	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOY93_RS05235	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOY93_RS05240	COG2223	nitrite transmembrane transporter activity
FOY93_RS05245	COG3056	Lipoprotein
FOY93_RS05250	COG0271	Belongs to the BolA IbaG family
FOY93_RS05260	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOY93_RS05270	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOY93_RS05275	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOY93_RS05280	COG0776	regulation of translation
FOY93_RS05285	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY93_RS05295	COG1555	photosystem II stabilization
FOY93_RS05300	COG0824	Thioesterase
FOY93_RS05305	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOY93_RS05310	COG4533	DNA binding
FOY93_RS05315	COG0561	phosphatase activity
FOY93_RS05325	COG1522	sequence-specific DNA binding
FOY93_RS05330	COG1132	(ABC) transporter
FOY93_RS05335	COG1132	(ABC) transporter
FOY93_RS05340	COG0347	Belongs to the P(II) protein family
FOY93_RS05345	COG0004	ammonium transporteR
FOY93_RS05355	COG1946	Acyl-CoA thioesterase
FOY93_RS05360	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FOY93_RS05365	COG3695	enzyme binding
FOY93_RS05410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY93_RS05415	COG2364	Membrane
FOY93_RS05420	COG1609	Transcriptional regulator
FOY93_RS05440	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FOY93_RS05450	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOY93_RS05470	COG0110	maltose O-acetyltransferase activity
FOY93_RS05485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS05490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS05495	COG1309	transcriptional regulator
FOY93_RS05500	COG1196	nuclear chromosome segregation
FOY93_RS05500	COG3264	Mechanosensitive ion channel
FOY93_RS05510	COG3923	Primosomal replication protein n
FOY93_RS05515	COG2832	Protein of unknown function (DUF454)
FOY93_RS05520	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOY93_RS05530	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FOY93_RS05535	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FOY93_RS05540	COG0326	Molecular chaperone. Has ATPase activity
FOY93_RS05550	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOY93_RS05555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY93_RS05560	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY93_RS05560	COG4651	solute:proton antiporter activity
FOY93_RS05565	COG2223	nitrite transmembrane transporter activity
FOY93_RS05570	COG0737	Belongs to the 5'-nucleotidase family
FOY93_RS05575	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY93_RS05580	COG3735	TraB family
FOY93_RS05595	COG1585	Membrane protein implicated in regulation of membrane protease activity
FOY93_RS05600	COG0330	HflC and HflK could
FOY93_RS05610	COG4619	ABC transporter
FOY93_RS05615	COG0390	transport system, permease component
FOY93_RS05620	COG3118	belongs to the thioredoxin family
FOY93_RS05625	COG0300	oxidoreductase activity
FOY93_RS05630	COG2755	lipolytic protein G-D-S-L family
FOY93_RS05635	COG4181	ATPase activity
FOY93_RS05640	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOY93_RS05655	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOY93_RS05660	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOY93_RS05670	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOY93_RS05675	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOY93_RS05685	COG1988	membrane-bound metal-dependent
FOY93_RS05690	COG1609	Transcriptional regulator
FOY93_RS05695	COG2190	(PTS) system
FOY93_RS05695	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS05695	COG1263	PTS System
FOY93_RS05700	COG2501	S4 domain
FOY93_RS05755	COG2200	EAL domain
FOY93_RS05795	COG1113	amino acid transport
FOY93_RS05800	COG0668	transmembrane transport
FOY93_RS05805	COG0477	Major facilitator Superfamily
FOY93_RS05820	COG0778	Nitroreductase
FOY93_RS05825	COG2315	Protein conserved in bacteria
FOY93_RS05840	COG2207	Transcriptional regulator
FOY93_RS05865	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FOY93_RS05875	COG2207	Transcriptional regulator
FOY93_RS05880	COG1289	transmembrane transporter activity
FOY93_RS05890	COG1566	PFAM secretion protein HlyD family protein
FOY93_RS05950	COG0583	DNA-binding transcription factor activity
FOY93_RS05995	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS06000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS06005	COG0601	transmembrane transport
FOY93_RS06025	COG4221	oxidoreductase activity
FOY93_RS06040	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FOY93_RS06060	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOY93_RS06070	COG4771	TonB-dependent receptor
FOY93_RS06075	COG2382	esterase
FOY93_RS06080	COG3251	PFAM MbtH domain protein
FOY93_RS06085	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FOY93_RS06085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY93_RS06090	COG1120	ATPase activity
FOY93_RS06095	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS06100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS06110	COG4592	Periplasmic binding protein
FOY93_RS06115	COG1169	isochorismate synthase
FOY93_RS06120	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOY93_RS06125	COG1535	isochorismatase
FOY93_RS06125	COG3433	isochorismatase activity
FOY93_RS06130	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS06135	COG2050	protein possibly involved in aromatic compounds catabolism
FOY93_RS06140	COG1966	Carbon starvation protein
FOY93_RS06145	COG2879	small protein
FOY93_RS06165	COG0371	Dehydrogenase
FOY93_RS06170	COG1129	ABC transporter
FOY93_RS06175	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS06190	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
FOY93_RS06195	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
FOY93_RS06210	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
FOY93_RS06215	COG0235	Class ii aldolase
FOY93_RS06220	COG0436	Aminotransferase
FOY93_RS06225	COG1475	DNA binding
FOY93_RS06230	COG3969	phosphoadenosine phosphosulfate
FOY93_RS06235	COG0583	DNA-binding transcription factor activity
FOY93_RS06260	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOY93_RS06270	COG3719	Belongs to the RNase T2 family
FOY93_RS06275	COG3069	C4-dicarboxylate transmembrane transporter activity
FOY93_RS06290	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOY93_RS06295	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY93_RS06300	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOY93_RS06305	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOY93_RS06310	COG0583	DNA-binding transcription factor activity
FOY93_RS06315	COG0321	lipoyl(octanoyl) transferase activity
FOY93_RS06320	COG2921	Belongs to the UPF0250 family
FOY93_RS06325	COG1686	Belongs to the peptidase S11 family
FOY93_RS06330	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOY93_RS06335	COG0772	Belongs to the SEDS family
FOY93_RS06340	COG0768	penicillin binding
FOY93_RS06350	COG0799	negative regulation of ribosome biogenesis
FOY93_RS06360	COG1466	dna polymerase III delta subunit
FOY93_RS06375	COG2888	peptidyl-tyrosine sulfation
FOY93_RS06380	COG1957	nucleoside hydrolase
FOY93_RS06385	COG1126	abc transporter atp-binding protein
FOY93_RS06390	COG0765	amino acid transport
FOY93_RS06395	COG0765	amino acid transport
FOY93_RS06415	COG4535	Mg2 and Co2 transporter CorC
FOY93_RS06420	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOY93_RS06425	COG1702	phosphate starvation-inducible protein PhoH
FOY93_RS06430	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOY93_RS06435	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY93_RS06475	COG0367	asparagine synthase
FOY93_RS06480	COG0647	UMP catabolic process
FOY93_RS06485	COG1846	Transcriptional regulator
FOY93_RS06485	COG1940	carbohydrate kinase activity
FOY93_RS06490	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOY93_RS06500	COG2190	(PTS) system
FOY93_RS06500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS06500	COG1263	PTS System
FOY93_RS06505	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY93_RS06520	COG0735	belongs to the Fur family
FOY93_RS06535	COG0596	Alpha beta hydrolase
FOY93_RS06540	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FOY93_RS06545	COG0033	Phosphoglucomutase
FOY93_RS06550	COG0531	amino acid
FOY93_RS06555	COG1982	Orn Lys Arg decarboxylase major
FOY93_RS06565	COG0745	RESPONSE REGULATOR receiver
FOY93_RS06570	COG2205	protein histidine kinase activity
FOY93_RS06575	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FOY93_RS06580	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FOY93_RS06585	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FOY93_RS06600	COG0415	Belongs to the DNA photolyase family
FOY93_RS06605	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOY93_RS06610	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOY93_RS06615	COG1984	allophanate hydrolase subunit 2
FOY93_RS06625	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOY93_RS06630	COG0372	Belongs to the citrate synthase family
FOY93_RS06635	COG2009	succinate dehydrogenase
FOY93_RS06640	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOY93_RS06645	COG1053	succinate dehydrogenase
FOY93_RS06650	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOY93_RS06655	COG0567	Dehydrogenase, E1 component
FOY93_RS06660	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOY93_RS06665	COG0045	succinate-CoA ligase (ADP-forming) activity
FOY93_RS06670	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOY93_RS06675	COG1271	oxidase subunit
FOY93_RS06680	COG1294	oxidase, subunit
FOY93_RS06685	COG4890	Cyd operon protein YbgT
FOY93_RS06690	COG3790	cyd operon protein YbgE
FOY93_RS06695	COG0824	Thioesterase
FOY93_RS06700	COG0811	peptide transport
FOY93_RS06705	COG0848	biopolymer transport protein
FOY93_RS06710	COG3064	Membrane
FOY93_RS06720	COG2885	chlorophyll binding
FOY93_RS06725	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FOY93_RS06755	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FOY93_RS06760	COG3201	nicotinamide mononucleotide transporter
FOY93_RS06765	COG1230	cation diffusion facilitator family transporter
FOY93_RS06775	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY93_RS06785	COG2017	converts alpha-aldose to the beta-anomer
FOY93_RS06790	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FOY93_RS06795	COG1085	galactose-1-phosphate uridylyltransferase
FOY93_RS06800	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOY93_RS06805	COG1119	ATPase activity
FOY93_RS06810	COG3585	molybdate ion transport
FOY93_RS06810	COG2005	Transcriptional regulator
FOY93_RS06820	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOY93_RS06825	COG4149	molybdate abc transporter
FOY93_RS06835	COG0561	phosphatase activity
FOY93_RS06840	COG2706	6-phosphogluconolactonase activity
FOY93_RS06845	COG4677	pectinesterase activity
FOY93_RS06855	COG0010	Belongs to the arginase family
FOY93_RS06865	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOY93_RS06870	COG2986	histidine ammonia-lyase
FOY93_RS06875	COG1881	PFAM PEBP family protein
FOY93_RS06885	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FOY93_RS06890	COG0156	8-amino-7-oxononanoate synthase activity
FOY93_RS06900	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOY93_RS06905	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOY93_RS06925	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOY93_RS06930	COG0315	cyclic pyranopterin monophosphate synthase activity
FOY93_RS06935	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FOY93_RS06940	COG0314	molybdopterin synthase activity
FOY93_RS06945	COG0670	Belongs to the BI1 family
FOY93_RS06950	COG0392	lysyltransferase activity
FOY93_RS06955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOY93_RS06960	COG3568	Endonuclease Exonuclease Phosphatase
FOY93_RS06970	COG0842	Transport permease protein
FOY93_RS06975	COG0842	Transport permease protein
FOY93_RS06980	COG1131	(ABC) transporter
FOY93_RS06985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS06990	COG1309	transcriptional regulator
FOY93_RS06995	COG0513	Belongs to the DEAD box helicase family
FOY93_RS07030	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOY93_RS07040	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FOY93_RS07055	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FOY93_RS07060	COG0668	transmembrane transport
FOY93_RS07065	COG1126	abc transporter atp-binding protein
FOY93_RS07070	COG0765	amino acid transport
FOY93_RS07075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS07085	COG0783	Belongs to the Dps family
FOY93_RS07095	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOY93_RS07100	COG2194	sulfuric ester hydrolase activity
FOY93_RS07110	COG1321	iron dependent repressor
FOY93_RS07115	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOY93_RS07120	COG1566	PFAM secretion protein HlyD family protein
FOY93_RS07125	COG2814	Major facilitator Superfamily
FOY93_RS07135	COG0667	Aldo Keto reductase
FOY93_RS07145	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS07150	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS07155	COG2188	Transcriptional regulator
FOY93_RS07160	COG1376	ErfK ybiS ycfS ynhG family protein
FOY93_RS07165	COG0488	(ABC) transporter
FOY93_RS07175	COG2271	Major facilitator Superfamily
FOY93_RS07180	COG1609	Transcriptional regulator
FOY93_RS07190	COG0561	phosphatase activity
FOY93_RS07195	COG1882	Formate acetyltransferase
FOY93_RS07200	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY93_RS07205	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FOY93_RS07210	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOY93_RS07220	COG1446	asparaginase
FOY93_RS07255	COG2133	pyrroloquinoline quinone binding
FOY93_RS07260	COG0625	glutathione transferase activity
FOY93_RS07265	COG1686	Belongs to the peptidase S11 family
FOY93_RS07270	COG1349	DNA-binding transcription factor activity
FOY93_RS07275	COG0671	phosphoesterase, PA-phosphatase related
FOY93_RS07285	COG2814	Major facilitator Superfamily
FOY93_RS07290	COG0561	phosphatase activity
FOY93_RS07295	COG0738	Major facilitator superfamily
FOY93_RS07300	COG3226	Transcriptional regulator
FOY93_RS07305	COG1393	Belongs to the ArsC family
FOY93_RS07310	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOY93_RS07315	COG0640	Transcriptional regulator
FOY93_RS07320	COG2985	domain, Protein
FOY93_RS07320	COG0569	domain protein
FOY93_RS07335	COG0778	Nitroreductase
FOY93_RS07340	COG0189	ligase activity
FOY93_RS07350	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOY93_RS07355	COG3842	ATPase activity
FOY93_RS07360	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOY93_RS07365	COG1177	transmembrane transport
FOY93_RS07375	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY93_RS07380	COG0745	RESPONSE REGULATOR receiver
FOY93_RS07385	COG5002	protein histidine kinase activity
FOY93_RS07390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS07395	COG4160	amino acid transport
FOY93_RS07400	COG4215	(ABC) transporter
FOY93_RS07405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS07410	COG1126	abc transporter atp-binding protein
FOY93_RS07425	COG3023	N-Acetylmuramoyl-L-alanine amidase
FOY93_RS07430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY93_RS07435	COG0702	epimerase
FOY93_RS07440	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FOY93_RS07445	COG0028	Belongs to the TPP enzyme family
FOY93_RS07455	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY93_RS07460	COG1151	hydroxylamine reductase activity
FOY93_RS07465	COG2431	L-lysine efflux transmembrane transporter activity
FOY93_RS07475	COG3593	DNA synthesis involved in DNA repair
FOY93_RS07480	COG2990	Protein conserved in bacteria
FOY93_RS07485	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS07495	COG1278	Cold shock
FOY93_RS07500	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOY93_RS07505	COG0542	response to heat
FOY93_RS07515	COG0737	Belongs to the 5'-nucleotidase family
FOY93_RS07525	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOY93_RS07530	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOY93_RS07535	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOY93_RS07540	COG4988	ABC transporter
FOY93_RS07545	COG0492	ferredoxin-NADP+ reductase activity
FOY93_RS07555	COG1178	ABC-type Fe3 transport system permease component
FOY93_RS07555	COG1674	ftsk spoiiie
FOY93_RS07560	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOY93_RS07565	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOY93_RS07570	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOY93_RS07575	COG0243	molybdopterin cofactor binding
FOY93_RS07580	COG0437	4 iron, 4 sulfur cluster binding
FOY93_RS07585	COG3302	dmso reductase anchor subunit
FOY93_RS07590	COG0477	Major facilitator Superfamily
FOY93_RS07600	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOY93_RS07605	COG1882	Formate acetyltransferase
FOY93_RS07610	COG2116	formate transmembrane transporter activity
FOY93_RS07615	COG1944	ATP diphosphatase activity
FOY93_RS07620	COG2323	membrane
FOY93_RS07625	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOY93_RS07630	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOY93_RS07635	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOY93_RS07640	COG0539	negative regulation of cytoplasmic translation
FOY93_RS07645	COG0776	regulation of translation
FOY93_RS07650	COG2333	competence protein COMEC
FOY93_RS07650	COG0658	competence protein
FOY93_RS07665	COG3214	Protein conserved in bacteria
FOY93_RS07670	COG2835	tetraacyldisaccharide 4'-kinase activity
FOY93_RS07675	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOY93_RS07680	COG3173	Aminoglycoside phosphotransferase
FOY93_RS07685	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOY93_RS07690	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOY93_RS07700	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FOY93_RS07705	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FOY93_RS07710	COG2989	Protein conserved in bacteria
FOY93_RS07715	COG3108	Peptidase M15
FOY93_RS07720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY93_RS07725	COG1448	Aminotransferase
FOY93_RS07735	COG0017	Asparaginyl-tRNA synthetase
FOY93_RS07740	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOY93_RS07745	COG0308	aminopeptidase N
FOY93_RS07755	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOY93_RS07760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS07765	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOY93_RS07770	COG0431	NADPH-dependent FMN reductase
FOY93_RS07775	COG0167	dihydroorotate dehydrogenase activity
FOY93_RS07785	COG3217	Mosc domain protein beta barrel domain protein
FOY93_RS07785	COG0633	Ferredoxin
FOY93_RS07790	COG0116	Belongs to the methyltransferase superfamily
FOY93_RS07790	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOY93_RS07795	COG0488	(ABC) transporter
FOY93_RS07800	COG2995	paraquat-inducible protein a
FOY93_RS07805	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOY93_RS07805	COG3008	intermembrane lipid transfer
FOY93_RS07810	COG3009	Protein conserved in bacteria
FOY93_RS07815	COG3130	regulation of translation
FOY93_RS07825	COG1067	ATP-dependent peptidase activity
FOY93_RS07830	COG3120	sequence-specific DNA binding
FOY93_RS07840	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
FOY93_RS07845	COG3070	regulator of competence-specific genes
FOY93_RS07850	COG1289	transmembrane transporter activity
FOY93_RS07855	COG3304	Inner membrane component domain
FOY93_RS07860	COG0210	DNA helicase
FOY93_RS07865	COG1803	Methylglyoxal synthase
FOY93_RS07870	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FOY93_RS07875	COG1832	CoA-binding protein
FOY93_RS07885	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOY93_RS07890	COG1881	PFAM PEBP family protein
FOY93_RS07900	COG1254	Belongs to the acylphosphatase family
FOY93_RS07905	COG2920	part of a sulfur-relay system
FOY93_RS07910	COG0670	Belongs to the BI1 family
FOY93_RS07945	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY93_RS07950	COG1696	Membrane protein involved in D-alanine export
FOY93_RS07975	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY93_RS07980	COG3648	Uricase
FOY93_RS07980	COG3195	allantoin biosynthetic process
FOY93_RS07985	COG2351	hydroxyisourate hydrolase activity
FOY93_RS07990	COG0402	S-adenosylhomocysteine deaminase activity
FOY93_RS07995	COG1953	Uracil, thiamine, allantoin
FOY93_RS08050	COG0765	amino acid transport
FOY93_RS08055	COG1126	abc transporter atp-binding protein
FOY93_RS08060	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOY93_RS08070	COG2239	Acts as a magnesium transporter
FOY93_RS08080	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS08085	COG1733	regulation of RNA biosynthetic process
FOY93_RS08110	COG0655	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS08115	COG3729	General stress protein
FOY93_RS08125	COG2233	PERMEase
FOY93_RS08130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY93_RS08135	COG0778	Nitroreductase
FOY93_RS08140	COG2267	carboxylic ester hydrolase activity
FOY93_RS08145	COG0251	oxidation-reduction process
FOY93_RS08150	COG1335	isochorismatase
FOY93_RS08155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS08160	COG1309	transcriptional regulator
FOY93_RS08170	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOY93_RS08170	COG0506	proline dehydrogenase activity
FOY93_RS08170	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOY93_RS08175	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOY93_RS08185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOY93_RS08200	COG2822	iron ion transport
FOY93_RS08210	COG1702	phosphate starvation-inducible protein PhoH
FOY93_RS08230	COG0583	DNA-binding transcription factor activity
FOY93_RS08240	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOY93_RS08245	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FOY93_RS08250	COG3381	protein complex oligomerization
FOY93_RS08275	COG2197	response regulator
FOY93_RS08300	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FOY93_RS08315	COG2943	transferase activity, transferring hexosyl groups
FOY93_RS08320	COG5645	(Lipo)protein
FOY93_RS08335	COG1560	Kdo2-lipid A biosynthetic process
FOY93_RS08340	COG1054	Belongs to the UPF0176 family
FOY93_RS08345	COG2353	YceI-like domain
FOY93_RS08350	COG3038	cytochrome b561
FOY93_RS08375	COG0418	dihydroorotase activity
FOY93_RS08385	COG0477	Major facilitator Superfamily
FOY93_RS08390	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS08395	COG3132	Protein of unknown function, DUF480
FOY93_RS08400	COG0673	inositol 2-dehydrogenase activity
FOY93_RS08405	COG0728	peptidoglycan biosynthetic process
FOY93_RS08430	COG1558	bacterial-type flagellum-dependent cell motility
FOY93_RS08435	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FOY93_RS08440	COG1749	Flagellar hook protein flgE
FOY93_RS08450	COG4786	Flagellar basal body rod
FOY93_RS08470	COG1256	bacterial-type flagellum assembly
FOY93_RS08475	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FOY93_RS08480	COG2814	Major facilitator Superfamily
FOY93_RS08485	COG0583	DNA-binding transcription factor activity
FOY93_RS08490	COG1530	ribonuclease E activity
FOY93_RS08495	COG0564	pseudouridine synthase activity
FOY93_RS08500	COG0424	maF-like protein
FOY93_RS08510	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOY93_RS08515	COG0416	fatty acid biosynthetic process
FOY93_RS08520	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOY93_RS08535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOY93_RS08540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY93_RS08545	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOY93_RS08550	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOY93_RS08555	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOY93_RS08560	COG0470	DNA polymerase III
FOY93_RS08565	COG0084	hydrolase, TatD family'
FOY93_RS08575	COG0537	adenosine 5'-monophosphoramidase activity
FOY93_RS08580	COG5633	Lipoprotein
FOY93_RS08585	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
FOY93_RS08600	COG3150	esterase
FOY93_RS08605	COG1252	NADH dehydrogenase
FOY93_RS08610	COG3134	Outer membrane lipoprotein
FOY93_RS08615	COG1309	transcriptional regulator
FOY93_RS08625	COG1388	LysM domain
FOY93_RS08625	COG1376	ErfK ybiS ycfS ynhG family protein
FOY93_RS08630	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOY93_RS08635	COG4763	Acyl-transferase
FOY93_RS08640	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOY93_RS08645	COG1136	(ABC) transporter
FOY93_RS08650	COG4591	ABC-type transport system involved in lipoprotein release permease component
FOY93_RS08660	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOY93_RS08665	COG0840	transmembrane signaling receptor activity
FOY93_RS08670	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FOY93_RS08700	COG2850	peptidyl-arginine hydroxylation
FOY93_RS08715	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOY93_RS08720	COG2915	High frequency lysogenization protein hflD homolog
FOY93_RS08735	COG1187	pseudouridine synthase activity
FOY93_RS08740	COG0538	isocitrate dehydrogenase activity
FOY93_RS08760	COG2200	EAL domain
FOY93_RS08765	COG4251	negative regulation of phosphorylation
FOY93_RS08765	COG3706	GGDEF domain
FOY93_RS08765	COG2203	Gaf domain
FOY93_RS08765	COG5001	Diguanylate cyclase
FOY93_RS08770	COG2261	transglycosylase associated protein
FOY93_RS08780	COG2199	diguanylate cyclase activity
FOY93_RS08780	COG2203	Gaf domain
FOY93_RS08785	COG3042	response to heat
FOY93_RS08795	COG3189	MarR family transcriptional regulator
FOY93_RS08800	COG0504	CTP synthase activity
FOY93_RS08805	COG2807	transmembrane transport
FOY93_RS08810	COG2207	Transcriptional regulator
FOY93_RS08815	COG2707	UPF0756 membrane protein
FOY93_RS08825	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOY93_RS08830	COG0582	viral genome integration into host DNA
FOY93_RS08920	COG1403	HNH endonuclease
FOY93_RS08950	COG3179	chitinase
FOY93_RS09120	COG2718	Belongs to the UPF0229 family
FOY93_RS09125	COG2766	serine protein kinase
FOY93_RS09130	COG3713	MltA-interacting MipA family protein
FOY93_RS09150	COG3139	Protein of unknown function (DUF1315)
FOY93_RS09155	COG1335	isochorismatase
FOY93_RS09160	COG0252	asparaginase activity
FOY93_RS09165	COG0616	signal peptide processing
FOY93_RS09170	COG0778	Nitroreductase
FOY93_RS09175	COG0709	Synthesizes selenophosphate from selenide and ATP
FOY93_RS09180	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOY93_RS09195	COG0494	nUDIX hydrolase
FOY93_RS09200	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY93_RS09205	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOY93_RS09210	COG2897	thiosulfate sulfurtransferase activity
FOY93_RS09215	COG4136	ATPase activity
FOY93_RS09220	COG4135	transport system, permease component
FOY93_RS09225	COG4134	Bacterial extracellular solute-binding protein
FOY93_RS09235	COG0708	Exodeoxyribonuclease III
FOY93_RS09245	COG3138	arginine N-succinyltransferase
FOY93_RS09250	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS09255	COG3724	N-succinylarginine dihydrolase activity
FOY93_RS09265	COG3678	ATP-independent chaperone mediated protein folding
FOY93_RS09275	COG0322	excinuclease ABC activity
FOY93_RS09280	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FOY93_RS09285	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY93_RS09290	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS09295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOY93_RS09300	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOY93_RS09305	COG1917	Cupin 2, conserved barrel domain protein
FOY93_RS09305	COG2169	Transcriptional regulator
FOY93_RS09310	COG1486	melibiose metabolic process
FOY93_RS09315	COG3394	polysaccharide catabolic process
FOY93_RS09320	COG0753	catalase activity
FOY93_RS09330	COG1823	symporter activity
FOY93_RS09335	COG1988	membrane-bound metal-dependent
FOY93_RS09340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY93_RS09350	COG3001	Fructosamine kinase
FOY93_RS09360	COG1105	Belongs to the carbohydrate kinase PfkB family
FOY93_RS09365	COG3137	Salt-induced outer membrane protein
FOY93_RS09380	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOY93_RS09390	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOY93_RS09405	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOY93_RS09410	COG0072	phenylalanine-tRNA ligase activity
FOY93_RS09410	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY93_RS09415	COG0776	regulation of translation
FOY93_RS09425	COG0386	Belongs to the glutathione peroxidase family
FOY93_RS09435	COG0791	NLP P60 protein
FOY93_RS09445	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOY93_RS09450	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS09455	COG2610	gluconate transmembrane transporter activity
FOY93_RS09465	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOY93_RS09470	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOY93_RS09475	COG0583	DNA-binding transcription factor activity
FOY93_RS09480	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY93_RS09485	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FOY93_RS09490	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOY93_RS09490	COG0574	Belongs to the PEP-utilizing enzyme family
FOY93_RS09495	COG2211	Major facilitator Superfamily
FOY93_RS09500	COG1472	Belongs to the glycosyl hydrolase 3 family
FOY93_RS09510	COG0628	permease
FOY93_RS09515	COG0247	lactate metabolic process
FOY93_RS09515	COG0277	FAD linked oxidase domain protein
FOY93_RS09520	COG2050	protein possibly involved in aromatic compounds catabolism
FOY93_RS09535	COG3383	formate dehydrogenase (NAD+) activity
FOY93_RS09555	COG2200	EAL domain
FOY93_RS09560	COG0789	Transcriptional regulator
FOY93_RS09570	COG0316	Belongs to the HesB IscA family
FOY93_RS09575	COG0719	Fe-S assembly protein
FOY93_RS09580	COG0396	ATPase activity
FOY93_RS09585	COG0719	Fe-S assembly protein
FOY93_RS09590	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOY93_RS09595	COG2166	iron-sulfur cluster assembly
FOY93_RS09600	COG1376	ErfK ybiS ycfS ynhG family protein
FOY93_RS09615	COG0626	cystathionine gamma-synthase activity
FOY93_RS09630	COG2011	ABC-type metal ion transport system permease component
FOY93_RS09635	COG1464	Belongs to the NlpA lipoprotein family
FOY93_RS09645	COG0765	amino acid transport
FOY93_RS09650	COG0765	amino acid transport
FOY93_RS09660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS09670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOY93_RS09680	COG4529	Protein conserved in bacteria
FOY93_RS09695	COG0534	Mate efflux family protein
FOY93_RS09700	COG0307	riboflavin synthase, alpha
FOY93_RS09705	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOY93_RS09710	COG2814	Major facilitator Superfamily
FOY93_RS09715	COG0583	DNA-binding transcription factor activity
FOY93_RS09730	COG2814	Major facilitator Superfamily
FOY93_RS09740	COG0791	NLP P60 protein
FOY93_RS09745	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOY93_RS09750	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOY93_RS09755	COG0346	lactoylglutathione lyase activity
FOY93_RS09760	COG1902	pentaerythritol trinitrate reductase activity
FOY93_RS09765	COG1309	transcriptional regulator
FOY93_RS09770	COG2194	sulfuric ester hydrolase activity
FOY93_RS09775	COG3313	Fe-S protein
FOY93_RS09780	COG4989	oxidoreductase activity
FOY93_RS09785	COG2032	superoxide dismutase activity
FOY93_RS09790	COG1289	transmembrane transporter activity
FOY93_RS09795	COG1566	PFAM secretion protein HlyD family protein
FOY93_RS09810	COG3706	GGDEF domain
FOY93_RS09820	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FOY93_RS09825	COG3895	Periplasmic Protein
FOY93_RS09830	COG0259	pyridoxamine-phosphate oxidase activity
FOY93_RS09835	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOY93_RS09840	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FOY93_RS09845	COG0625	glutathione transferase activity
FOY93_RS09850	COG3104	oligopeptide transport
FOY93_RS09855	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOY93_RS09905	COG0673	inositol 2-dehydrogenase activity
FOY93_RS09910	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FOY93_RS09915	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOY93_RS09920	COG1263	PTS System
FOY93_RS09920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS09925	COG1609	Transcriptional regulator
FOY93_RS09930	COG0583	DNA-binding transcription factor activity
FOY93_RS09935	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOY93_RS09945	COG5339	Protein conserved in bacteria
FOY93_RS09950	COG1482	cell wall glycoprotein biosynthetic process
FOY93_RS09955	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY93_RS09955	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY93_RS09960	COG0114	fumarate hydratase activity
FOY93_RS09970	COG2205	protein histidine kinase activity
FOY93_RS09980	COG0745	RESPONSE REGULATOR receiver
FOY93_RS09985	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS09990	COG0531	amino acid
FOY93_RS10000	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FOY93_RS10005	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FOY93_RS10025	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOY93_RS10030	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FOY93_RS10035	COG1473	amidohydrolase
FOY93_RS10045	COG0583	DNA-binding transcription factor activity
FOY93_RS10050	COG2840	Smr protein MutS2
FOY93_RS10060	COG0667	Aldo Keto reductase
FOY93_RS10065	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOY93_RS10080	COG0583	DNA-binding transcription factor activity
FOY93_RS10095	COG0583	DNA-binding transcription factor activity
FOY93_RS10100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY93_RS10120	COG3850	Histidine kinase
FOY93_RS10120	COG5002	protein histidine kinase activity
FOY93_RS10135	COG1403	HNH endonuclease
FOY93_RS10140	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS10150	COG0628	permease
FOY93_RS10155	COG2076	Multidrug Resistance protein
FOY93_RS10160	COG2076	Multidrug Resistance protein
FOY93_RS10165	COG5001	Diguanylate cyclase
FOY93_RS10170	COG3591	Belongs to the peptidase S1B family
FOY93_RS10180	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOY93_RS10185	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOY93_RS10190	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOY93_RS10195	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS10200	COG1917	Cupin 2, conserved barrel domain protein
FOY93_RS10200	COG1396	sequence-specific DNA binding
FOY93_RS10205	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FOY93_RS10210	COG0174	glutamine synthetase
FOY93_RS10220	COG0531	amino acid
FOY93_RS10225	COG2814	Major facilitator Superfamily
FOY93_RS10230	COG0583	DNA-binding transcription factor activity
FOY93_RS10235	COG1940	carbohydrate kinase activity
FOY93_RS10240	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FOY93_RS10295	COG3141	response to X-ray
FOY93_RS10300	COG3708	Transcriptional regulator
FOY93_RS10300	COG2207	Transcriptional regulator
FOY93_RS10305	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS10325	COG0745	RESPONSE REGULATOR receiver
FOY93_RS10330	COG3713	MltA-interacting MipA family protein
FOY93_RS10355	COG3381	protein complex oligomerization
FOY93_RS10360	COG0243	molybdopterin cofactor binding
FOY93_RS10380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS10390	COG1742	UPF0060 membrane protein
FOY93_RS10395	COG4948	Mandelate Racemase Muconate Lactonizing
FOY93_RS10400	COG1063	alcohol dehydrogenase
FOY93_RS10405	COG0477	Major facilitator Superfamily
FOY93_RS10410	COG0246	Mannitol dehydrogenase
FOY93_RS10420	COG0589	response to stress
FOY93_RS10425	COG1802	Transcriptional regulator
FOY93_RS10430	COG4221	oxidoreductase activity
FOY93_RS10440	COG5001	Diguanylate cyclase
FOY93_RS10440	COG3300	MHYT domain
FOY93_RS10455	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY93_RS10470	COG2911	Protein conserved in bacteria
FOY93_RS10480	COG3784	Protein of unknown function (DUF1318)
FOY93_RS10485	COG2207	Transcriptional regulator
FOY93_RS10490	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS10495	COG3706	GGDEF domain
FOY93_RS10505	COG2030	dehydratase
FOY93_RS10505	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS10510	COG3396	Phenylacetate-CoA oxygenase
FOY93_RS10515	COG3460	Phenylacetate-CoA oxygenase
FOY93_RS10520	COG3396	Phenylacetate-CoA oxygenase
FOY93_RS10525	COG2151	metal-sulfur cluster biosynthetic enzyme
FOY93_RS10530	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY93_RS10535	COG1024	Enoyl-CoA hydratase
FOY93_RS10540	COG1024	Enoyl-CoA hydratase
FOY93_RS10545	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY93_RS10550	COG2050	protein possibly involved in aromatic compounds catabolism
FOY93_RS10555	COG0183	Belongs to the thiolase family
FOY93_RS10560	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
FOY93_RS10565	COG3327	negative regulation of DNA-templated transcription, initiation
FOY93_RS10570	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY93_RS10585	COG0386	Belongs to the glutathione peroxidase family
FOY93_RS10595	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY93_RS10605	COG2807	transmembrane transport
FOY93_RS10610	COG1846	Transcriptional regulator
FOY93_RS10640	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS10650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS10665	COG0583	DNA-binding transcription factor activity
FOY93_RS10670	COG1902	pentaerythritol trinitrate reductase activity
FOY93_RS10675	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS10700	COG1733	regulation of RNA biosynthetic process
FOY93_RS10705	COG0346	lactoylglutathione lyase activity
FOY93_RS10725	COG0300	oxidoreductase activity
FOY93_RS10740	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOY93_RS10770	COG0583	DNA-binding transcription factor activity
FOY93_RS10790	COG3122	Protein conserved in bacteria
FOY93_RS10795	COG0564	pseudouridine synthase activity
FOY93_RS10805	COG1643	Atp-dependent helicase
FOY93_RS10810	COG4122	O-methyltransferase activity
FOY93_RS10815	COG1538	Outer membrane efflux protein
FOY93_RS10830	COG0477	Major facilitator Superfamily
FOY93_RS10835	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FOY93_RS10840	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOY93_RS10845	COG3038	cytochrome b561
FOY93_RS10850	COG0673	inositol 2-dehydrogenase activity
FOY93_RS10855	COG1349	DNA-binding transcription factor activity
FOY93_RS10895	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOY93_RS10900	COG0456	acetyltransferase
FOY93_RS10905	COG0583	DNA-binding transcription factor activity
FOY93_RS10940	COG0402	S-adenosylhomocysteine deaminase activity
FOY93_RS10945	COG2814	Major facilitator Superfamily
FOY93_RS10965	COG0840	transmembrane signaling receptor activity
FOY93_RS10975	COG0583	DNA-binding transcription factor activity
FOY93_RS10980	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS10985	COG3111	PFAM Bacterial OB fold (BOF) protein
FOY93_RS10995	COG2323	membrane
FOY93_RS11000	COG1546	Belongs to the CinA family
FOY93_RS11015	COG1294	oxidase, subunit
FOY93_RS11020	COG1271	oxidase subunit
FOY93_RS11025	COG3546	catalase activity
FOY93_RS11030	COG3685	Protein conserved in bacteria
FOY93_RS11040	COG3685	Protein conserved in bacteria
FOY93_RS11045	COG3729	General stress protein
FOY93_RS11050	COG5383	Protein conserved in bacteria
FOY93_RS11055	COG2272	Belongs to the type-B carboxylesterase lipase family
FOY93_RS11065	COG0436	Aminotransferase
FOY93_RS11075	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
FOY93_RS11080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS11085	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY93_RS11090	COG0500	methyltransferase
FOY93_RS11095	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOY93_RS11100	COG0747	negative chemotaxis
FOY93_RS11120	COG3135	benzoate transporter
FOY93_RS11125	COG1396	sequence-specific DNA binding
FOY93_RS11130	COG0826	peptidase U32
FOY93_RS11145	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOY93_RS11160	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOY93_RS11190	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOY93_RS11195	COG2814	Major facilitator Superfamily
FOY93_RS11200	COG0697	spore germination
FOY93_RS11215	COG1846	Transcriptional regulator
FOY93_RS11225	COG2814	Major facilitator Superfamily
FOY93_RS11245	COG0583	DNA-binding transcription factor activity
FOY93_RS11250	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS11260	COG2066	Belongs to the glutaminase family
FOY93_RS11270	COG2199	diguanylate cyclase activity
FOY93_RS11275	COG3706	GGDEF domain
FOY93_RS11285	COG0246	Mannitol dehydrogenase
FOY93_RS11290	COG3781	membrane
FOY93_RS11315	COG0456	acetyltransferase
FOY93_RS11320	COG0596	Alpha beta hydrolase
FOY93_RS11340	COG4106	trans-aconitate 2-methyltransferase activity
FOY93_RS11350	COG2771	luxR family
FOY93_RS11355	COG0494	nUDIX hydrolase
FOY93_RS11360	COG1349	DNA-binding transcription factor activity
FOY93_RS11385	COG0583	DNA-binding transcription factor activity
FOY93_RS11415	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS11425	COG0745	RESPONSE REGULATOR receiver
FOY93_RS11435	COG0583	DNA-binding transcription factor activity
FOY93_RS11440	COG2814	Major facilitator Superfamily
FOY93_RS11475	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOY93_RS11485	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
FOY93_RS11500	COG0583	DNA-binding transcription factor activity
FOY93_RS11505	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY93_RS11515	COG1366	Belongs to the anti-sigma-factor antagonist family
FOY93_RS11560	COG2205	protein histidine kinase activity
FOY93_RS11560	COG5002	protein histidine kinase activity
FOY93_RS11560	COG0784	Response regulator, receiver
FOY93_RS11565	COG3250	beta-galactosidase activity
FOY93_RS11570	COG4628	conserved protein (DUF2132)
FOY93_RS11575	COG1649	PFAM Uncharacterised BCR, COG1649
FOY93_RS11580	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOY93_RS11620	COG0840	transmembrane signaling receptor activity
FOY93_RS11650	COG2200	EAL domain
FOY93_RS11665	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FOY93_RS11670	COG0747	negative chemotaxis
FOY93_RS11675	COG0601	transmembrane transport
FOY93_RS11680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS11685	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS11690	COG4608	Belongs to the ABC transporter superfamily
FOY93_RS11695	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS11705	COG1764	response to oxidative stress
FOY93_RS11735	COG0281	malic enzyme
FOY93_RS11740	COG0488	(ABC) transporter
FOY93_RS11745	COG1064	alcohol dehydrogenase
FOY93_RS11755	COG0601	transmembrane transport
FOY93_RS11760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS11770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS11780	COG2814	Major facilitator Superfamily
FOY93_RS11815	COG2864	formate dehydrogenase
FOY93_RS11820	COG0437	4 iron, 4 sulfur cluster binding
FOY93_RS11840	COG0583	DNA-binding transcription factor activity
FOY93_RS11880	COG3158	transport of potassium into the cell
FOY93_RS11895	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FOY93_RS11900	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOY93_RS11905	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOY93_RS11910	COG0640	Transcriptional regulator
FOY93_RS11930	COG3493	citrate carrier protein
FOY93_RS11945	COG1560	Kdo2-lipid A biosynthetic process
FOY93_RS11950	COG1942	4-Oxalocrotonate Tautomerase
FOY93_RS11955	COG0625	glutathione transferase activity
FOY93_RS11965	COG1126	abc transporter atp-binding protein
FOY93_RS11980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS11985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS11990	COG1473	amidohydrolase
FOY93_RS11995	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS12005	COG0840	transmembrane signaling receptor activity
FOY93_RS12020	COG4772	TonB-dependent receptor
FOY93_RS12025	COG1802	Transcriptional regulator
FOY93_RS12030	COG2130	NADP-dependent
FOY93_RS12040	COG1247	-acetyltransferase
FOY93_RS12045	COG3238	Protein conserved in bacteria
FOY93_RS12055	COG0747	negative chemotaxis
FOY93_RS12085	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS12090	COG1177	transmembrane transport
FOY93_RS12095	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOY93_RS12100	COG3842	ATPase activity
FOY93_RS12105	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOY93_RS12110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY93_RS12135	COG1271	oxidase subunit
FOY93_RS12140	COG1294	oxidase, subunit
FOY93_RS12150	COG3187	Heat shock protein
FOY93_RS12155	COG3042	response to heat
FOY93_RS12160	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY93_RS12160	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
FOY93_RS12160	COG1013	pyruvate-flavodoxin oxidoreductase activity
FOY93_RS12160	COG0674	pyruvate-flavodoxin oxidoreductase activity
FOY93_RS12165	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY93_RS12200	COG2200	EAL domain
FOY93_RS12215	COG0513	Belongs to the DEAD box helicase family
FOY93_RS12230	COG0840	transmembrane signaling receptor activity
FOY93_RS12240	COG3706	GGDEF domain
FOY93_RS12250	COG0693	protein deglycase activity
FOY93_RS12260	COG4166	transmembrane transport
FOY93_RS12265	COG2866	Carboxypeptidase
FOY93_RS12270	COG4948	Mandelate Racemase Muconate Lactonizing
FOY93_RS12275	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOY93_RS12290	COG3768	UPF0283 membrane protein
FOY93_RS12295	COG3106	COG3106 Predicted ATPase
FOY93_RS12300	COG1609	Transcriptional regulator
FOY93_RS12310	COG3842	ATPase activity
FOY93_RS12315	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY93_RS12320	COG1554	hydrolase, family 65, central catalytic
FOY93_RS12325	COG0673	inositol 2-dehydrogenase activity
FOY93_RS12330	COG1082	Xylose isomerase domain protein TIM barrel
FOY93_RS12335	COG1063	alcohol dehydrogenase
FOY93_RS12340	COG0395	ABC-type sugar transport system, permease component
FOY93_RS12345	COG1175	transmembrane transport
FOY93_RS12350	COG1653	transport
FOY93_RS12355	COG0366	Alpha amylase catalytic
FOY93_RS12365	COG1983	PspC domain protein
FOY93_RS12375	COG1842	Phage shock protein A
FOY93_RS12380	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOY93_RS12395	COG4171	peptide transport system, permease
FOY93_RS12415	COG5002	protein histidine kinase activity
FOY93_RS12420	COG0745	RESPONSE REGULATOR receiver
FOY93_RS12435	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS12440	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOY93_RS12445	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY93_RS12445	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOY93_RS12450	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FOY93_RS12455	COG5001	Diguanylate cyclase
FOY93_RS12460	COG1024	Enoyl-CoA hydratase
FOY93_RS12470	COG1349	DNA-binding transcription factor activity
FOY93_RS12480	COG0023	Translation Initiation Factor
FOY93_RS12485	COG0284	orotidine-5'-phosphate decarboxylase activity
FOY93_RS12490	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOY93_RS12495	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FOY93_RS12500	COG0671	phosphoesterase, PA-phosphatase related
FOY93_RS12510	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOY93_RS12535	COG0616	signal peptide processing
FOY93_RS12540	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS12545	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FOY93_RS12575	COG0009	L-threonylcarbamoyladenylate synthase
FOY93_RS12580	COG0613	PHP domain protein
FOY93_RS12595	COG0512	Glutamine amidotransferase of anthranilate synthase
FOY93_RS12595	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOY93_RS12605	COG0133	tryptophan synthase activity
FOY93_RS12610	COG0159	tryptophan synthase activity
FOY93_RS12615	COG2391	methyltransferase activity
FOY93_RS12620	COG0425	Belongs to the sulfur carrier protein TusA family
FOY93_RS12630	COG3047	cAMP biosynthetic process
FOY93_RS12635	COG0727	PFAM Uncharacterised protein family (UPF0153)
FOY93_RS12660	COG2350	Protein conserved in bacteria
FOY93_RS12670	COG1280	lysine exporter protein (LysE YggA)
FOY93_RS12685	COG3099	Belongs to the UPF0263 family
FOY93_RS12690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOY93_RS12700	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS12710	COG0601	transmembrane transport
FOY93_RS12725	COG2095	MarC family integral membrane protein
FOY93_RS12730	COG1454	alcohol dehydrogenase
FOY93_RS12730	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS12735	COG1435	thymidine kinase activity
FOY93_RS12745	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOY93_RS12750	COG0745	RESPONSE REGULATOR receiver
FOY93_RS12755	COG1752	Esterase of the alpha-beta hydrolase superfamily
FOY93_RS12760	COG3012	SEC-C Motif Domain Protein
FOY93_RS12765	COG0788	formyltetrahydrofolate deformylase activity
FOY93_RS12780	COG1522	sequence-specific DNA binding
FOY93_RS12790	COG2181	nitrate reductase activity
FOY93_RS12795	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOY93_RS12800	COG1140	nitrate reductase beta subunit
FOY93_RS12805	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOY93_RS12810	COG2223	nitrite transmembrane transporter activity
FOY93_RS12815	COG3850	Histidine kinase
FOY93_RS12820	COG2197	response regulator
FOY93_RS12825	COG4932	domain protein
FOY93_RS12830	COG0243	molybdopterin cofactor binding
FOY93_RS12835	COG2146	nitrite reductase [NAD(P)H] activity
FOY93_RS12835	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY93_RS12840	COG1116	anion transmembrane transporter activity
FOY93_RS12850	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOY93_RS12860	COG3707	response regulator
FOY93_RS12865	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOY93_RS12870	COG0840	transmembrane signaling receptor activity
FOY93_RS12880	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FOY93_RS12885	COG4572	Cation transport regulator
FOY93_RS12890	COG0387	Pfam Sodium calcium exchanger
FOY93_RS12895	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOY93_RS12910	COG2890	protein-(glutamine-N5) methyltransferase activity
FOY93_RS12920	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FOY93_RS12925	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FOY93_RS12930	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOY93_RS12940	COG0659	secondary active sulfate transmembrane transporter activity
FOY93_RS12955	COG0193	aminoacyl-tRNA hydrolase activity
FOY93_RS12960	COG0012	GTP binding
FOY93_RS13030	COG3209	COG3209 Rhs family protein
FOY93_RS13070	COG1397	ADP-ribosylglycohydrolase
FOY93_RS13080	COG1397	ADP-ribosylglycohydrolase
FOY93_RS13115	COG0515	serine threonine protein kinase
FOY93_RS13225	COG0243	molybdopterin cofactor binding
FOY93_RS13230	COG0583	DNA-binding transcription factor activity
FOY93_RS13245	COG4977	sequence-specific DNA binding
FOY93_RS13250	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOY93_RS13255	COG2814	Major facilitator Superfamily
FOY93_RS13270	COG4774	siderophore transport
FOY93_RS13285	COG0741	lytic transglycosylase activity
FOY93_RS13290	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOY93_RS13295	COG3263	regulation of cellular component size
FOY93_RS13300	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOY93_RS13305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOY93_RS13310	COG2719	SpoVR family
FOY93_RS13320	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FOY93_RS13335	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY93_RS13340	COG3100	YcgL domain-containing protein
FOY93_RS13345	COG0850	regulation of cytokinetic process
FOY93_RS13350	COG2894	cell division
FOY93_RS13355	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOY93_RS13360	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FOY93_RS13365	COG0318	PFAM AMP-dependent synthetase and ligase
FOY93_RS13370	COG3065	identical protein binding
FOY93_RS13375	COG1214	PFAM Peptidase M22, glycoprotease
FOY93_RS13380	COG1199	ATP-dependent helicase activity
FOY93_RS13385	COG0251	oxidation-reduction process
FOY93_RS13395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FOY93_RS13405	COG1760	l-serine dehydratase
FOY93_RS13415	COG2200	EAL domain
FOY93_RS13420	COG1253	flavin adenine dinucleotide binding
FOY93_RS13425	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS13425	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS13430	COG3715	PTS system
FOY93_RS13435	COG3716	PTS system mannose fructose sorbose family IID component
FOY93_RS13440	COG4811	Protein of unknown function (DUF986)
FOY93_RS13450	COG2226	methyltransferase
FOY93_RS13455	COG0768	penicillin binding
FOY93_RS13490	COG1414	Transcriptional regulator
FOY93_RS13495	COG2814	Major facilitator Superfamily
FOY93_RS13500	COG0501	Belongs to the peptidase M48B family
FOY93_RS13515	COG1956	GAF domain-containing protein
FOY93_RS13520	COG2995	paraquat-inducible protein a
FOY93_RS13525	COG3008	intermembrane lipid transfer
FOY93_RS13530	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOY93_RS13530	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FOY93_RS13545	COG2990	Protein conserved in bacteria
FOY93_RS13560	COG1276	copper resistance
FOY93_RS13565	COG2372	response to copper ion
FOY93_RS13575	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOY93_RS13580	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOY93_RS13585	COG1770	oligopeptidase
FOY93_RS13590	COG2979	Protein of unknown function (DUF533)
FOY93_RS13600	COG0800	Aldolase
FOY93_RS13605	COG0129	dihydroxy-acid dehydratase activity
FOY93_RS13610	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOY93_RS13615	COG1737	Transcriptional regulator
FOY93_RS13625	COG1560	Kdo2-lipid A biosynthetic process
FOY93_RS13630	COG0739	heme binding
FOY93_RS13635	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FOY93_RS13645	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOY93_RS13655	COG0632	four-way junction helicase activity
FOY93_RS13670	COG0494	nUDIX hydrolase
FOY93_RS13680	COG1335	isochorismatase
FOY93_RS13685	COG1801	Protein of unknown function DUF72
FOY93_RS13690	COG3788	relative of glutathione S-transferase, MAPEG superfamily
FOY93_RS13695	COG2226	methyltransferase
FOY93_RS13700	COG0500	methyltransferase
FOY93_RS13705	COG3142	Participates in the control of copper homeostasis
FOY93_RS13710	COG3102	Protein conserved in bacteria
FOY93_RS13715	COG0018	arginyl-trna synthetase
FOY93_RS13740	COG0745	RESPONSE REGULATOR receiver
FOY93_RS13755	COG0840	transmembrane signaling receptor activity
FOY93_RS13790	COG1301	dicarboxylic acid transport
FOY93_RS13830	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FOY93_RS13840	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS13850	COG1879	ABC-type sugar transport system periplasmic component
FOY93_RS13855	COG1528	Iron-storage protein
FOY93_RS13860	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FOY93_RS13880	COG1528	Iron-storage protein
FOY93_RS13885	COG0814	amino acid
FOY93_RS13930	COG3318	Belongs to the UPF0149 family
FOY93_RS13930	COG3012	SEC-C Motif Domain Protein
FOY93_RS13950	COG0411	ABC transporter
FOY93_RS13960	COG3416	Protein conserved in bacteria
FOY93_RS13995	COG2197	response regulator
FOY93_RS14005	COG2197	response regulator
FOY93_RS14010	COG1126	abc transporter atp-binding protein
FOY93_RS14015	COG0765	amino acid transport
FOY93_RS14025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS14050	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FOY93_RS14065	COG0366	Alpha amylase catalytic
FOY93_RS14075	COG1677	Flagellar hook-basal body complex protein FliE
FOY93_RS14085	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOY93_RS14095	COG1157	protein secretion by the type III secretion system
FOY93_RS14135	COG1987	bacterial-type flagellum assembly
FOY93_RS14145	COG2197	response regulator
FOY93_RS14170	COG5475	Uncharacterized small protein (DUF2158)
FOY93_RS14175	COG2354	Protein conserved in bacteria
FOY93_RS14180	COG0697	spore germination
FOY93_RS14185	COG3727	T/G mismatch-specific endonuclease activity
FOY93_RS14190	COG0270	DNA (cytosine-5-)-methyltransferase activity
FOY93_RS14195	COG1418	mRNA catabolic process
FOY93_RS14200	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOY93_RS14210	COG3290	protein histidine kinase activity
FOY93_RS14215	COG4565	transcriptional regulatory protein
FOY93_RS14235	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY93_RS14235	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FOY93_RS14260	COG0583	DNA-binding transcription factor activity
FOY93_RS14265	COG3046	protein related to deoxyribodipyrimidine photolyase
FOY93_RS14280	COG2814	Major facilitator Superfamily
FOY93_RS14315	COG0251	oxidation-reduction process
FOY93_RS14340	COG1376	ErfK ybiS ycfS ynhG family protein
FOY93_RS14345	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOY93_RS14350	COG0589	response to stress
FOY93_RS14360	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS14375	COG0477	Major facilitator Superfamily
FOY93_RS14380	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOY93_RS14385	COG0006	proline dipeptidase activity
FOY93_RS14395	COG0534	Mate efflux family protein
FOY93_RS14415	COG1289	transmembrane transporter activity
FOY93_RS14420	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FOY93_RS14430	COG2925	Exonuclease
FOY93_RS14435	COG0531	amino acid
FOY93_RS14445	COG0583	DNA-binding transcription factor activity
FOY93_RS14450	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY93_RS14460	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOY93_RS14470	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOY93_RS14475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOY93_RS14475	COG0131	Imidazoleglycerol-phosphate dehydratase
FOY93_RS14480	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOY93_RS14485	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOY93_RS14495	COG0140	phosphoribosyl-ATP diphosphatase activity
FOY93_RS14495	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FOY93_RS14520	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY93_RS14540	COG1216	Glycosyl transferase, family 2
FOY93_RS14540	COG0463	Glycosyl transferase, family 2
FOY93_RS14575	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOY93_RS14595	COG0438	transferase activity, transferring glycosyl groups
FOY93_RS14600	COG2327	Polysaccharide pyruvyl transferase
FOY93_RS14605	COG2244	polysaccharide biosynthetic process
FOY93_RS14610	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOY93_RS14615	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY93_RS14625	COG0297	glycogen (starch) synthase activity
FOY93_RS14630	COG1051	belongs to the nudix hydrolase family
FOY93_RS14635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOY93_RS14640	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FOY93_RS14645	COG0110	maltose O-acetyltransferase activity
FOY93_RS14650	COG1216	Glycosyl transferase, family 2
FOY93_RS14660	COG0438	transferase activity, transferring glycosyl groups
FOY93_RS14665	COG1045	serine acetyltransferase
FOY93_RS14670	COG0463	Glycosyl transferase, family 2
FOY93_RS14675	COG0489	protein tyrosine kinase activity
FOY93_RS14675	COG3206	protein involved in exopolysaccharide biosynthesis
FOY93_RS14690	COG1253	flavin adenine dinucleotide binding
FOY93_RS14695	COG2982	Protein involved in outer membrane biogenesis
FOY93_RS14700	COG0717	Belongs to the dCTP deaminase family
FOY93_RS14710	COG3447	MASE1 domain protein
FOY93_RS14710	COG5002	protein histidine kinase activity
FOY93_RS14710	COG5001	Diguanylate cyclase
FOY93_RS14715	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FOY93_RS14720	COG0443	Heat shock 70 kDa protein
FOY93_RS14730	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS14735	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS14740	COG0477	Major facilitator Superfamily
FOY93_RS14745	COG2205	protein histidine kinase activity
FOY93_RS14750	COG0745	RESPONSE REGULATOR receiver
FOY93_RS14755	COG0826	peptidase U32
FOY93_RS14760	COG1683	Conserved Protein
FOY93_RS14765	COG1597	lipid kinase activity
FOY93_RS14770	COG1830	Aldolase
FOY93_RS14775	COG2211	Major facilitator Superfamily
FOY93_RS14780	COG1397	ADP-ribosylglycohydrolase
FOY93_RS14785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY93_RS14790	COG2188	Transcriptional regulator
FOY93_RS14795	COG0351	phosphomethylpyrimidine kinase
FOY93_RS14800	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FOY93_RS14860	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOY93_RS14865	COG0076	glutamate decarboxylase activity
FOY93_RS14870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOY93_RS14875	COG5455	response to cobalt ion
FOY93_RS14885	COG0489	protein tyrosine kinase activity
FOY93_RS14890	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY93_RS14890	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOY93_RS14895	COG4807	Protein conserved in bacteria
FOY93_RS14905	COG3275	phosphorelay sensor kinase activity
FOY93_RS14910	COG0789	Transcriptional regulator
FOY93_RS14920	COG1174	glycine betaine transport
FOY93_RS14925	COG1125	glycine betaine transport
FOY93_RS14930	COG1174	glycine betaine transport
FOY93_RS14935	COG1732	Glycine betaine
FOY93_RS14940	COG1472	Belongs to the glycosyl hydrolase 3 family
FOY93_RS14945	COG0277	FAD linked oxidase domain protein
FOY93_RS14955	COG1686	Belongs to the peptidase S11 family
FOY93_RS14965	COG0586	Pfam SNARE associated Golgi protein
FOY93_RS14970	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS14975	COG1538	Outer membrane efflux protein
FOY93_RS14985	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS15000	COG3659	wide pore channel activity
FOY93_RS15005	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOY93_RS15010	COG2207	Transcriptional regulator
FOY93_RS15025	COG1346	cytolysis
FOY93_RS15030	COG0295	cytidine deaminase activity
FOY93_RS15035	COG2949	membrane
FOY93_RS15040	COG0174	glutamine synthetase
FOY93_RS15050	COG1129	ABC transporter
FOY93_RS15065	COG2311	Membrane
FOY93_RS15075	COG0477	Major facilitator Superfamily
FOY93_RS15085	COG4771	TonB-dependent receptor
FOY93_RS15090	COG0833	amino acid
FOY93_RS15095	COG0583	DNA-binding transcription factor activity
FOY93_RS15100	COG2855	membrane
FOY93_RS15105	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FOY93_RS15110	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOY93_RS15110	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOY93_RS15110	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FOY93_RS15115	COG1105	Belongs to the carbohydrate kinase PfkB family
FOY93_RS15120	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS15120	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS15135	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOY93_RS15140	COG1312	Catalyzes the dehydration of D-mannonate
FOY93_RS15145	COG0246	Mannitol dehydrogenase
FOY93_RS15150	COG0523	cobalamin synthesis protein
FOY93_RS15155	COG0671	phosphoesterase, PA-phosphatase related
FOY93_RS15160	COG0791	NLP P60 protein
FOY93_RS15165	COG2200	EAL domain
FOY93_RS15170	COG4166	transmembrane transport
FOY93_RS15175	COG4174	ABC transporter (Permease)
FOY93_RS15180	COG4239	(ABC) transporter, permease
FOY93_RS15185	COG4172	Belongs to the ABC transporter superfamily
FOY93_RS15195	COG2814	Major facilitator Superfamily
FOY93_RS15200	COG1187	pseudouridine synthase activity
FOY93_RS15205	COG1061	Type III restriction enzyme res subunit
FOY93_RS15215	COG3081	Nucleoid-associated protein
FOY93_RS15220	COG3082	Protein of unknown function (DUF1414)
FOY93_RS15240	COG3182	Iron-regulated membrane protein
FOY93_RS15250	COG0579	oxidoreductase
FOY93_RS15255	COG0659	secondary active sulfate transmembrane transporter activity
FOY93_RS15260	COG2239	Acts as a magnesium transporter
FOY93_RS15265	COG4615	Cyclic peptide transporter
FOY93_RS15270	COG3145	DNA-N1-methyladenine dioxygenase activity
FOY93_RS15275	COG2169	Transcriptional regulator
FOY93_RS15275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOY93_RS15290	COG0642	Histidine kinase
FOY93_RS15290	COG2198	Histidine kinase
FOY93_RS15300	COG2205	protein histidine kinase activity
FOY93_RS15300	COG0784	Response regulator, receiver
FOY93_RS15310	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOY93_RS15325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY93_RS15330	COG0584	glycerophosphoryl diester phosphodiesterase
FOY93_RS15335	COG2271	Major facilitator Superfamily
FOY93_RS15340	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOY93_RS15345	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FOY93_RS15350	COG0247	lactate metabolic process
FOY93_RS15370	COG1441	menaquinone biosynthetic process
FOY93_RS15380	COG0596	Alpha beta hydrolase
FOY93_RS15385	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOY93_RS15390	COG1169	isochorismate synthase
FOY93_RS15395	COG4575	ribosome binding
FOY93_RS15400	COG2153	protein acetylation
FOY93_RS15405	COG1234	tRNA 3'-trailer cleavage
FOY93_RS15410	COG0835	chemotaxis
FOY93_RS15410	COG0784	Response regulator, receiver
FOY93_RS15415	COG1007	ATP synthesis coupled electron transport
FOY93_RS15420	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY93_RS15425	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOY93_RS15430	COG0713	ATP synthesis coupled electron transport
FOY93_RS15435	COG0839	Belongs to the complex I subunit 6 family
FOY93_RS15445	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOY93_RS15475	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY93_RS15480	COG0583	DNA-binding transcription factor activity
FOY93_RS15485	COG0436	Aminotransferase
FOY93_RS15495	COG0471	metal ion transport
FOY93_RS15495	COG0490	domain, Protein
FOY93_RS15500	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY93_RS15525	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FOY93_RS15530	COG3959	Transketolase, thiamine diphosphate binding domain
FOY93_RS15535	COG3037	sugar-specific permease SgaT UlaA
FOY93_RS15545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS15550	COG1609	Transcriptional regulator
FOY93_RS15560	COG0622	Phosphoesterase
FOY93_RS15565	COG0625	glutathione transferase activity
FOY93_RS15570	COG0625	glutathione transferase activity
FOY93_RS15575	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOY93_RS15580	COG1090	epimerase
FOY93_RS15585	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS15590	COG4598	ABC transporter
FOY93_RS15595	COG4160	amino acid transport
FOY93_RS15605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS15615	COG0163	prenyltransferase activity
FOY93_RS15620	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FOY93_RS15625	COG1286	toxin biosynthetic process
FOY93_RS15630	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FOY93_RS15635	COG0285	dihydrofolate synthase activity
FOY93_RS15645	COG0586	Pfam SNARE associated Golgi protein
FOY93_RS15650	COG0101	tRNA pseudouridine synthase activity
FOY93_RS15655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOY93_RS15675	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY93_RS15680	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOY93_RS15680	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOY93_RS15690	COG3101	peptidyl-lysine hydroxylation
FOY93_RS15695	COG0730	response to heat
FOY93_RS15705	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOY93_RS15715	COG2840	Smr protein MutS2
FOY93_RS15720	COG2062	phosphohistidine phosphatase, SixA
FOY93_RS15725	COG1024	Enoyl-CoA hydratase
FOY93_RS15725	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY93_RS15735	COG3691	Protein conserved in bacteria
FOY93_RS15740	COG2067	long-chain fatty acid transport protein
FOY93_RS15750	COG2116	formate transmembrane transporter activity
FOY93_RS15760	COG0582	viral genome integration into host DNA
FOY93_RS15925	COG2885	chlorophyll binding
FOY93_RS15950	COG1560	Kdo2-lipid A biosynthetic process
FOY93_RS15960	COG0436	Aminotransferase
FOY93_RS15965	COG3275	phosphorelay sensor kinase activity
FOY93_RS15970	COG3279	Response regulator of the LytR AlgR family
FOY93_RS15975	COG0837	glucose binding
FOY93_RS15985	COG3961	Belongs to the TPP enzyme family
FOY93_RS15990	COG0667	Aldo Keto reductase
FOY93_RS16000	COG1914	H( )-stimulated, divalent metal cation uptake system
FOY93_RS16005	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FOY93_RS16010	COG2200	EAL domain
FOY93_RS16010	COG2199	diguanylate cyclase activity
FOY93_RS16020	COG3415	Transposase
FOY93_RS16025	COG3415	Transposase
FOY93_RS16030	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOY93_RS16050	COG0583	DNA-binding transcription factor activity
FOY93_RS16055	COG0385	Bile acid
FOY93_RS16060	COG3530	Putative quorum-sensing-regulated virulence factor
FOY93_RS16065	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOY93_RS16070	COG3115	cell septum assembly
FOY93_RS16090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS16115	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOY93_RS16120	COG4208	sulfate ABC transporter
FOY93_RS16125	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FOY93_RS16130	COG4150	thiosulfate binding
FOY93_RS16135	COG2837	iron assimilation
FOY93_RS16160	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOY93_RS16165	COG0408	coproporphyrinogen oxidase activity
FOY93_RS16180	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOY93_RS16185	COG5342	invasion associated locus B
FOY93_RS16190	COG0494	nUDIX hydrolase
FOY93_RS16195	COG0493	'glutamate synthase
FOY93_RS16195	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY93_RS16200	COG3850	Histidine kinase
FOY93_RS16205	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS16215	COG1393	Belongs to the ArsC family
FOY93_RS16220	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOY93_RS16230	COG0400	carboxylic ester hydrolase activity
FOY93_RS16235	COG1444	tRNA N-acetyltransferase activity
FOY93_RS16240	COG2321	neutral zinc metallopeptidase
FOY93_RS16250	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOY93_RS16260	COG2716	regulation of RNA biosynthetic process
FOY93_RS16265	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOY93_RS16270	COG0628	permease
FOY93_RS16275	COG4783	chaperone-mediated protein folding
FOY93_RS16280	COG1393	Belongs to the ArsC family
FOY93_RS16295	COG1446	asparaginase
FOY93_RS16300	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY93_RS16310	COG2233	PERMEase
FOY93_RS16315	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOY93_RS16320	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS16325	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOY93_RS16330	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOY93_RS16345	COG2200	EAL domain
FOY93_RS16355	COG0583	DNA-binding transcription factor activity
FOY93_RS16375	COG3718	enzyme involved in inositol metabolism
FOY93_RS16385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY93_RS16390	COG0673	inositol 2-dehydrogenase activity
FOY93_RS16395	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS16410	COG0673	inositol 2-dehydrogenase activity
FOY93_RS16415	COG3962	Belongs to the TPP enzyme family
FOY93_RS16435	COG0517	IMP dehydrogenase activity
FOY93_RS16435	COG0516	GMP reductase activity
FOY93_RS16440	COG1570	exodeoxyribonuclease VII activity
FOY93_RS16455	COG1645	bacterial-type flagellum-dependent swarming motility
FOY93_RS16465	COG1160	GTP binding
FOY93_RS16475	COG2976	Protein conserved in bacteria
FOY93_RS16480	COG0124	histidyl-tRNA synthetase
FOY93_RS16485	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FOY93_RS16495	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOY93_RS16505	COG4953	penicillin-binding protein 1C
FOY93_RS16510	COG2373	Large extracellular alpha-helical protein
FOY93_RS16515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS16515	COG2190	(PTS) system
FOY93_RS16515	COG1263	PTS System
FOY93_RS16525	COG2897	thiosulfate sulfurtransferase activity
FOY93_RS16530	COG1737	Transcriptional regulator
FOY93_RS16540	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY93_RS16545	COG2975	iron-sulfur cluster assembly
FOY93_RS16550	COG0633	Ferredoxin
FOY93_RS16555	COG0443	Heat shock 70 kDa protein
FOY93_RS16560	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOY93_RS16565	COG0316	Belongs to the HesB IscA family
FOY93_RS16570	COG0822	iron-sulfur transferase activity
FOY93_RS16575	COG1104	cysteine desulfurase activity
FOY93_RS16580	COG1959	2 iron, 2 sulfur cluster binding
FOY93_RS16595	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY93_RS16605	COG3711	transcriptional antiterminator
FOY93_RS16610	COG2814	Major facilitator Superfamily
FOY93_RS16615	COG2259	Doxx family
FOY93_RS16625	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOY93_RS16625	COG1017	nitric oxide dioxygenase activity
FOY93_RS16630	COG0347	Belongs to the P(II) protein family
FOY93_RS16635	COG2204	response regulator
FOY93_RS16640	COG3170	Tfp pilus assembly protein FimV
FOY93_RS16645	COG2205	protein histidine kinase activity
FOY93_RS16650	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOY93_RS16650	COG0047	phosphoribosylformylglycinamidine synthase activity
FOY93_RS16655	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FOY93_RS16665	COG0560	Phosphoserine phosphatase
FOY93_RS16670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS16670	COG1263	PTS System
FOY93_RS16675	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FOY93_RS16680	COG1737	Transcriptional regulator
FOY93_RS16685	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY93_RS16695	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOY93_RS16700	COG1381	Involved in DNA repair and RecF pathway recombination
FOY93_RS16715	COG0681	Belongs to the peptidase S26 family
FOY93_RS16725	COG3086	response to oxidative stress
FOY93_RS16735	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FOY93_RS16750	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOY93_RS16755	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOY93_RS16760	COG0513	Belongs to the DEAD box helicase family
FOY93_RS16765	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
FOY93_RS16775	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOY93_RS16780	COG3118	belongs to the thioredoxin family
FOY93_RS16785	COG3148	PFAM DTW domain containing protein
FOY93_RS16790	COG0045	succinate-CoA ligase (ADP-forming) activity
FOY93_RS16790	COG1042	CoA-binding domain protein
FOY93_RS16790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS16795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOY93_RS16800	COG5544	Lipoprotein
FOY93_RS16805	COG0477	Major facilitator Superfamily
FOY93_RS16830	COG0542	response to heat
FOY93_RS16845	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOY93_RS16850	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOY93_RS16860	COG0077	Prephenate dehydratase
FOY93_RS16860	COG1605	Chorismate mutase
FOY93_RS16870	COG1605	Chorismate mutase
FOY93_RS16870	COG0287	Prephenate dehydrogenase
FOY93_RS16875	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOY93_RS16890	COG2199	diguanylate cyclase activity
FOY93_RS16895	COG2885	chlorophyll binding
FOY93_RS16915	COG0336	Belongs to the RNA methyltransferase TrmD family
FOY93_RS16920	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOY93_RS16930	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOY93_RS16935	COG4137	Cytochrome C assembly protein
FOY93_RS16940	COG4536	flavin adenine dinucleotide binding
FOY93_RS16945	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOY93_RS16950	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOY93_RS16955	COG0497	DNA recombination
FOY93_RS16975	COG2867	negative regulation of translational initiation
FOY93_RS16990	COG0582	viral genome integration into host DNA
FOY93_RS16995	COG0419	ATPase involved in DNA repair
FOY93_RS17020	COG3311	Transcriptional regulator
FOY93_RS17035	COG4735	regulation of single-species biofilm formation
FOY93_RS17070	COG2003	Belongs to the UPF0758 family
FOY93_RS17090	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOY93_RS17090	COG2169	Transcriptional regulator
FOY93_RS17145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS17150	COG3549	Plasmid maintenance system killer
FOY93_RS17155	COG3093	addiction module antidote protein HigA
FOY93_RS17165	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOY93_RS17180	COG0402	S-adenosylhomocysteine deaminase activity
FOY93_RS17185	COG0549	Belongs to the carbamate kinase family
FOY93_RS17195	COG1304	FMN binding
FOY93_RS17200	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOY93_RS17205	COG0666	response to abiotic stimulus
FOY93_RS17210	COG0583	DNA-binding transcription factor activity
FOY93_RS17215	COG0401	homolog of Blt101
FOY93_RS17220	COG0640	Transcriptional regulator
FOY93_RS17225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY93_RS17250	COG4575	ribosome binding
FOY93_RS17260	COG1780	Probably involved in ribonucleotide reductase function
FOY93_RS17275	COG4175	Glycine betaine
FOY93_RS17280	COG4176	ABC-type proline glycine betaine transport system permease component
FOY93_RS17290	COG2814	Major facilitator Superfamily
FOY93_RS17295	COG1846	Transcriptional regulator
FOY93_RS17300	COG1566	PFAM secretion protein HlyD family protein
FOY93_RS17305	COG2814	Major facilitator Superfamily
FOY93_RS17310	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOY93_RS17325	COG2918	glutathione biosynthetic process
FOY93_RS17330	COG1238	metal cluster binding
FOY93_RS17335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY93_RS17365	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FOY93_RS17370	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOY93_RS17385	COG1546	Belongs to the CinA family
FOY93_RS17395	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOY93_RS17405	COG2951	lytic endotransglycosylase activity
FOY93_RS17410	COG3730	PTS system glucitol sorbitol-specific
FOY93_RS17415	COG3732	PTS system glucitol sorbitol-specific
FOY93_RS17425	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS17430	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS17435	COG1349	DNA-binding transcription factor activity
FOY93_RS17445	COG3604	Transcriptional regulator
FOY93_RS17450	COG0426	domain, Protein
FOY93_RS17450	COG1773	rubredoxin
FOY93_RS17455	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOY93_RS17460	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FOY93_RS17465	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
FOY93_RS17470	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY93_RS17475	COG1609	Transcriptional regulator
FOY93_RS17480	COG1263	PTS System
FOY93_RS17480	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS17485	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS17490	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
FOY93_RS17500	COG3260	NADH ubiquinone oxidoreductase 20
FOY93_RS17505	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOY93_RS17510	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
FOY93_RS17510	COG3261	NADH dehydrogenase
FOY93_RS17515	COG0650	Formate hydrogenlyase subunit 4
FOY93_RS17520	COG0651	ATP synthesis coupled electron transport
FOY93_RS17525	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOY93_RS17535	COG0375	protein maturation
FOY93_RS17540	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FOY93_RS17545	COG0298	carbon dioxide binding
FOY93_RS17550	COG0409	Hydrogenase expression formation protein
FOY93_RS17555	COG0309	Hydrogenase expression formation protein (HypE)
FOY93_RS17570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS17575	COG1120	ATPase activity
FOY93_RS17595	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOY93_RS17605	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY93_RS17610	COG0163	prenyltransferase activity
FOY93_RS17625	COG0477	Major facilitator Superfamily
FOY93_RS17640	COG1388	LysM domain
FOY93_RS17640	COG4942	peptidase
FOY93_RS17655	COG0585	pseudouridine synthase activity
FOY93_RS17665	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOY93_RS17670	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FOY93_RS17680	COG0529	Catalyzes the synthesis of activated sulfate
FOY93_RS17700	COG2234	aminopeptidase activity
FOY93_RS17710	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY93_RS17715	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FOY93_RS17720	COG0720	synthase
FOY93_RS17730	COG1473	amidohydrolase
FOY93_RS17740	COG0602	queuosine metabolic process
FOY93_RS17745	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
FOY93_RS17750	COG2190	(PTS) system
FOY93_RS17750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS17750	COG1263	PTS System
FOY93_RS17755	COG1737	Transcriptional regulator
FOY93_RS17775	COG3956	TIGRFAM MazG family protein
FOY93_RS17780	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOY93_RS17785	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY93_RS17790	COG4999	Histidine kinase
FOY93_RS17790	COG2205	protein histidine kinase activity
FOY93_RS17790	COG3437	response regulator, receiver
FOY93_RS17790	COG3850	Histidine kinase
FOY93_RS17795	COG1929	Belongs to the glycerate kinase type-1 family
FOY93_RS17800	COG4948	Mandelate Racemase Muconate Lactonizing
FOY93_RS17805	COG4948	Mandelate Racemase Muconate Lactonizing
FOY93_RS17810	COG2271	Major facilitator Superfamily
FOY93_RS17820	COG0716	FMN binding
FOY93_RS17825	COG0564	pseudouridine synthase activity
FOY93_RS17830	COG3098	single-species biofilm formation
FOY93_RS17845	COG1611	Belongs to the LOG family
FOY93_RS17850	COG0814	amino acid
FOY93_RS17855	COG1760	l-serine dehydratase
FOY93_RS17865	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FOY93_RS17870	COG2363	Small membrane protein
FOY93_RS17875	COG0583	DNA-binding transcription factor activity
FOY93_RS17885	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOY93_RS17890	COG2166	iron-sulfur cluster assembly
FOY93_RS17895	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOY93_RS17900	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FOY93_RS17920	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOY93_RS17925	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOY93_RS17925	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOY93_RS17930	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOY93_RS17935	COG1074	ATP-dependent DNA helicase activity
FOY93_RS17945	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FOY93_RS17950	COG4967	type IV pilus modification protein PilV
FOY93_RS17960	COG4795	General secretion pathway protein
FOY93_RS17965	COG2165	general secretion pathway protein
FOY93_RS17970	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FOY93_RS17975	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FOY93_RS17985	COG0494	nUDIX hydrolase
FOY93_RS17990	COG3066	DNA modification
FOY93_RS18000	COG0667	Aldo Keto reductase
FOY93_RS18005	COG0477	Major facilitator Superfamily
FOY93_RS18010	COG0318	PFAM AMP-dependent synthetase and ligase
FOY93_RS18010	COG0204	Acyl-transferase
FOY93_RS18015	COG1609	Transcriptional regulator
FOY93_RS18025	COG1609	Transcriptional regulator
FOY93_RS18035	COG0583	DNA-binding transcription factor activity
FOY93_RS18045	COG1733	regulation of RNA biosynthetic process
FOY93_RS18050	COG1794	racemase activity, acting on amino acids and derivatives
FOY93_RS18055	COG2814	Major facilitator Superfamily
FOY93_RS18060	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS18070	COG0183	Belongs to the thiolase family
FOY93_RS18085	COG0814	amino acid
FOY93_RS18100	COG2388	GCN5-related N-acetyl-transferase
FOY93_RS18105	COG3592	Divergent 4Fe-4S mono-cluster
FOY93_RS18115	COG4565	transcriptional regulatory protein
FOY93_RS18130	COG3842	ATPase activity
FOY93_RS18265	COG4942	peptidase
FOY93_RS18270	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
FOY93_RS18275	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOY93_RS18285	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOY93_RS18295	COG4974	Belongs to the 'phage' integrase family
FOY93_RS18310	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOY93_RS18315	COG0354	folic acid binding
FOY93_RS18320	COG1272	protein, Hemolysin III
FOY93_RS18330	COG1737	Transcriptional regulator
FOY93_RS18335	COG2723	6-phospho-beta-galactosidase activity
FOY93_RS18340	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS18345	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOY93_RS18345	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOY93_RS18355	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOY93_RS18360	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY93_RS18365	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOY93_RS18370	COG0006	proline dipeptidase activity
FOY93_RS18380	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FOY93_RS18390	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOY93_RS18395	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOY93_RS18400	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOY93_RS18405	COG0583	DNA-binding transcription factor activity
FOY93_RS18410	COG2968	Membrane
FOY93_RS18415	COG1279	arginine transmembrane transporter activity
FOY93_RS18420	COG0668	transmembrane transport
FOY93_RS18425	COG0191	fructose-bisphosphate aldolase activity
FOY93_RS18435	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOY93_RS18440	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOY93_RS18450	COG0501	Belongs to the peptidase M48B family
FOY93_RS18460	COG0010	Belongs to the arginase family
FOY93_RS18465	COG1166	arginine decarboxylase activity
FOY93_RS18480	COG2814	Major facilitator Superfamily
FOY93_RS18485	COG3091	SprT-like family
FOY93_RS18490	COG2356	endonuclease I
FOY93_RS18495	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOY93_RS18510	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOY93_RS18515	COG2805	Type II/IV secretion system protein
FOY93_RS18520	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOY93_RS18525	COG0762	integral membrane protein
FOY93_RS18530	COG1872	DUF167
FOY93_RS18540	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOY93_RS18550	COG3171	Protein conserved in bacteria
FOY93_RS18560	COG1194	a g-specific adenine glycosylase
FOY93_RS18570	COG0741	lytic transglycosylase activity
FOY93_RS18575	COG2211	Major facilitator Superfamily
FOY93_RS18580	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FOY93_RS18600	COG3052	prosthetic group binding
FOY93_RS18610	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOY93_RS18615	COG3493	citrate carrier protein
FOY93_RS18630	COG1982	Orn Lys Arg decarboxylase major
FOY93_RS18635	COG1811	Na channel or pump
FOY93_RS18645	COG0582	viral genome integration into host DNA
FOY93_RS18655	COG3547	Transposase (IS116 IS110 IS902 family)
FOY93_RS18675	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS18800	COG1470	cell adhesion involved in biofilm formation
FOY93_RS18800	COG1388	LysM domain
FOY93_RS18855	COG3596	GTP binding
FOY93_RS18895	COG2003	Belongs to the UPF0758 family
FOY93_RS18945	COG0457	Tetratricopeptide repeat
FOY93_RS18950	COG0726	polysaccharide deacetylase
FOY93_RS18950	COG1649	PFAM Uncharacterised BCR, COG1649
FOY93_RS18955	COG1215	transferase activity, transferring glycosyl groups
FOY93_RS18965	COG0754	glutathionylspermidine amidase activity
FOY93_RS18970	COG4608	Belongs to the ABC transporter superfamily
FOY93_RS18975	COG0444	Belongs to the ABC transporter superfamily
FOY93_RS18980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOY93_RS18985	COG0601	transmembrane transport
FOY93_RS18995	COG0625	glutathione transferase activity
FOY93_RS19015	COG0667	Aldo Keto reductase
FOY93_RS19020	COG2862	Uncharacterized protein family, UPF0114
FOY93_RS19040	COG0848	biopolymer transport protein
FOY93_RS19050	COG0626	cystathionine gamma-synthase activity
FOY93_RS19055	COG0586	Pfam SNARE associated Golgi protein
FOY93_RS19060	COG2207	Transcriptional regulator
FOY93_RS19065	COG1979	alcohol dehydrogenase
FOY93_RS19075	COG1032	radical SAM domain protein
FOY93_RS19080	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOY93_RS19100	COG3111	PFAM Bacterial OB fold (BOF) protein
FOY93_RS19115	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS19120	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FOY93_RS19135	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS19140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOY93_RS19145	COG1120	ATPase activity
FOY93_RS19150	COG4774	siderophore transport
FOY93_RS19155	COG0187	DNA topoisomerase II activity
FOY93_RS19160	COG3150	esterase
FOY93_RS19165	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOY93_RS19170	COG3151	Protein conserved in bacteria
FOY93_RS19175	COG0494	nUDIX hydrolase
FOY93_RS19190	COG0754	glutathionylspermidine amidase activity
FOY93_RS19195	COG3384	dioxygenase
FOY93_RS19205	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FOY93_RS19215	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOY93_RS19215	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOY93_RS19225	COG3025	triphosphatase activity
FOY93_RS19230	COG4991	sh3 domain protein
FOY93_RS19235	COG0617	tRNA 3'-terminal CCA addition
FOY93_RS19245	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FOY93_RS19255	COG0477	Major facilitator Superfamily
FOY93_RS19260	COG1846	Transcriptional regulator
FOY93_RS19265	COG0657	acetylesterase activity
FOY93_RS19270	COG0829	nickel cation binding
FOY93_RS19275	COG0831	urea catabolic process
FOY93_RS19280	COG0832	Belongs to the urease beta subunit family
FOY93_RS19285	COG0804	urea catabolic process
FOY93_RS19290	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FOY93_RS19300	COG0830	nickel cation binding
FOY93_RS19305	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FOY93_RS19315	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOY93_RS19320	COG0358	DNA primase activity
FOY93_RS19330	COG3663	DNA glycosylase
FOY93_RS19360	COG2375	cellular response to nickel ion
FOY93_RS19365	COG1695	Transcriptional regulator
FOY93_RS19370	COG0840	transmembrane signaling receptor activity
FOY93_RS19375	COG0840	transmembrane signaling receptor activity
FOY93_RS19380	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOY93_RS19400	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FOY93_RS19405	COG1830	Aldolase
FOY93_RS19410	COG1879	ABC-type sugar transport system periplasmic component
FOY93_RS19415	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS19420	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS19425	COG1129	ABC transporter
FOY93_RS19430	COG2390	Transcriptional regulator
FOY93_RS19435	COG1070	Carbohydrate kinase
FOY93_RS19440	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOY93_RS19440	COG1902	pentaerythritol trinitrate reductase activity
FOY93_RS19450	COG1451	nucleotide metabolic process
FOY93_RS19455	COG0673	inositol 2-dehydrogenase activity
FOY93_RS19460	COG0861	Integral membrane protein TerC family
FOY93_RS19470	COG2721	sulfolactate sulfo-lyase activity
FOY93_RS19480	COG2271	Major facilitator Superfamily
FOY93_RS19485	COG2186	Transcriptional regulator
FOY93_RS19490	COG0586	Pfam SNARE associated Golgi protein
FOY93_RS19500	COG1422	Protein of unknown function (DUF1090)
FOY93_RS19505	COG4575	ribosome binding
FOY93_RS19510	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
FOY93_RS19520	COG2259	Doxx family
FOY93_RS19525	COG0435	Glutathione S-transferase
FOY93_RS19530	COG3152	Membrane
FOY93_RS19535	COG0583	DNA-binding transcription factor activity
FOY93_RS19540	COG1741	Belongs to the pirin family
FOY93_RS19550	COG1882	Formate acetyltransferase
FOY93_RS19555	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOY93_RS19560	COG0814	amino acid
FOY93_RS19565	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOY93_RS19570	COG0583	DNA-binding transcription factor activity
FOY93_RS19580	COG2084	Dehydrogenase
FOY93_RS19590	COG2721	sulfolactate sulfo-lyase activity
FOY93_RS19595	COG1349	DNA-binding transcription factor activity
FOY93_RS19605	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOY93_RS19615	COG3716	PTS system mannose fructose sorbose family IID component
FOY93_RS19620	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS19625	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOY93_RS19630	COG2222	sugar isomerase
FOY93_RS19635	COG0191	fructose-bisphosphate aldolase activity
FOY93_RS19645	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FOY93_RS19655	COG3107	peptidoglycan biosynthetic process
FOY93_RS19660	COG0792	nuclease activity
FOY93_RS19665	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOY93_RS19670	COG2823	Periplasmic or secreted lipoprotein
FOY93_RS19675	COG0701	Predicted permease
FOY93_RS19680	COG0702	epimerase
FOY93_RS19685	COG0693	protein deglycase activity
FOY93_RS19690	COG3787	Belongs to the UPF0306 family
FOY93_RS19695	COG2827	Endonuclease containing a URI domain
FOY93_RS19700	COG3153	acetyltransferase
FOY93_RS19705	COG3154	lipid carrier protein
FOY93_RS19710	COG0826	peptidase U32
FOY93_RS19715	COG0826	peptidase U32
FOY93_RS19720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOY93_RS19725	COG0814	amino acid
FOY93_RS19730	COG0513	Belongs to the DEAD box helicase family
FOY93_RS19750	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOY93_RS19755	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOY93_RS19760	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOY93_RS19785	COG0137	argininosuccinate synthase activity
FOY93_RS19795	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOY93_RS19800	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOY93_RS19805	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOY93_RS19815	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOY93_RS19820	COG1534	Rna-binding protein
FOY93_RS19830	COG2027	D-alanyl-D-alanine carboxypeptidase
FOY93_RS19835	COG0745	RESPONSE REGULATOR receiver
FOY93_RS19840	COG0642	Histidine kinase
FOY93_RS19845	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOY93_RS19850	COG0697	spore germination
FOY93_RS19860	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOY93_RS19865	COG0142	geranyltranstransferase activity
FOY93_RS19870	COG3423	Transcriptional regulator
FOY93_RS19875	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOY93_RS19880	COG5007	Belongs to the BolA IbaG family
FOY93_RS19885	COG3113	response to antibiotic
FOY93_RS19890	COG2854	intermembrane phospholipid transfer
FOY93_RS19895	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOY93_RS19900	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOY93_RS19905	COG1127	ABC transporter
FOY93_RS19910	COG0530	calcium, potassium:sodium antiporter activity
FOY93_RS19920	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOY93_RS19925	COG3117	lipopolysaccharide transmembrane transporter activity
FOY93_RS19930	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FOY93_RS19935	COG1137	ATPase activity
FOY93_RS19940	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOY93_RS19960	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOY93_RS19970	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FOY93_RS19975	COG5002	protein histidine kinase activity
FOY93_RS19975	COG2198	Histidine kinase
FOY93_RS19975	COG0784	Response regulator, receiver
FOY93_RS19980	COG0795	lipopolysaccharide-transporting ATPase activity
FOY93_RS19985	COG0795	lipopolysaccharide-transporting ATPase activity
FOY93_RS19990	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOY93_RS19995	COG2927	DNA polymerase III (CHI subunit)
FOY93_RS20010	COG1064	alcohol dehydrogenase
FOY93_RS20020	COG0433	COG0433 Predicted ATPase
FOY93_RS20025	COG1242	4 iron, 4 sulfur cluster binding
FOY93_RS20030	COG0067	glutamate synthase
FOY93_RS20030	COG0069	glutamate synthase activity
FOY93_RS20030	COG0070	glutamate synthase
FOY93_RS20035	COG0493	'glutamate synthase
FOY93_RS20040	COG2969	positive regulation of protein catabolic process
FOY93_RS20045	COG0625	glutathione transferase activity
FOY93_RS20055	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOY93_RS20070	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOY93_RS20075	COG3105	Protein conserved in bacteria
FOY93_RS20080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOY93_RS20085	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOY93_RS20090	COG0039	L-malate dehydrogenase activity
FOY93_RS20095	COG1438	arginine binding
FOY93_RS20110	COG2732	(Barnase) inhibitor
FOY93_RS20115	COG1012	belongs to the aldehyde dehydrogenase family
FOY93_RS20120	COG1289	transmembrane transporter activity
FOY93_RS20135	COG0583	DNA-binding transcription factor activity
FOY93_RS20140	COG0312	modulator of DNA gyrase
FOY93_RS20145	COG3164	Protein of unknown function
FOY93_RS20160	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FOY93_RS20165	COG1792	Involved in formation and maintenance of cell shape
FOY93_RS20170	COG1077	Cell shape determining protein MreB Mrl
FOY93_RS20175	COG2199	diguanylate cyclase activity
FOY93_RS20175	COG2200	EAL domain
FOY93_RS20180	COG0604	alcohol dehydrogenase
FOY93_RS20190	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FOY93_RS20200	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOY93_RS20205	COG0511	ligase activity, forming carbon-carbon bonds
FOY93_RS20210	COG0439	Biotin carboxylase
FOY93_RS20215	COG3924	membrane
FOY93_RS20220	COG4145	pantothenate transmembrane transporter activity
FOY93_RS20255	COG1309	transcriptional regulator
FOY93_RS20260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOY93_RS20265	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOY93_RS20275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOY93_RS20280	COG4597	amino acid ABC transporter
FOY93_RS20285	COG0765	amino acid transport
FOY93_RS20290	COG1126	abc transporter atp-binding protein
FOY93_RS20325	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOY93_RS20335	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOY93_RS20340	COG0009	L-threonylcarbamoyladenylate synthase
FOY93_RS20345	COG0551	DNA topoisomerase type I activity
FOY93_RS20350	COG2922	Belongs to the Smg family
FOY93_RS20355	COG0758	DNA mediated transformation
FOY93_RS20360	COG0242	peptide deformylase activity
FOY93_RS20370	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOY93_RS20370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOY93_RS20385	COG3036	rescue of stalled ribosome
FOY93_RS20390	COG0789	Transcriptional regulator
FOY93_RS20405	COG0202	RNA polymerase activity
FOY93_RS20415	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOY93_RS20430	COG0201	protein transport
FOY93_RS20440	COG1841	ribosomal large subunit assembly
FOY93_RS20455	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOY93_RS20460	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOY93_RS20490	COG0255	Belongs to the universal ribosomal protein uL29 family
FOY93_RS20495	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOY93_RS20535	COG0051	transcription antitermination factor activity, RNA binding
FOY93_RS20575	COG2168	tRNA wobble position uridine thiolation
FOY93_RS20580	COG2923	Belongs to the DsrF TusC family
FOY93_RS20585	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FOY93_RS20590	COG2964	Protein conserved in bacteria
FOY93_RS20595	COG0545	Peptidyl-prolyl cis-trans isomerase
FOY93_RS20605	COG1047	Peptidyl-prolyl cis-trans
FOY93_RS20610	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
FOY93_RS20615	COG0475	glutathione-regulated potassium exporter activity
FOY93_RS20615	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOY93_RS20620	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS20625	COG0488	(ABC) transporter
FOY93_RS20630	COG0429	hydrolase of the alpha beta-hydrolase fold
FOY93_RS20635	COG3089	Belongs to the UPF0270 family
FOY93_RS20640	COG3954	Phosphoribulokinase
FOY93_RS20645	COG1765	OsmC-like protein
FOY93_RS20655	COG1289	transmembrane transporter activity
FOY93_RS20660	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOY93_RS20670	COG2184	nucleotidyltransferase activity
FOY93_RS20680	COG0738	Major facilitator superfamily
FOY93_RS20685	COG0402	S-adenosylhomocysteine deaminase activity
FOY93_RS20690	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOY93_RS20700	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOY93_RS20700	COG1648	precorrin-2 dehydrogenase activity
FOY93_RS20710	COG0180	Tryptophanyl-tRNA synthetase
FOY93_RS20720	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOY93_RS20725	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FOY93_RS20730	COG3266	domain, Protein
FOY93_RS20735	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOY93_RS20740	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOY93_RS20745	COG4796	Type ii and iii secretion system protein
FOY93_RS20760	COG3166	PFAM Fimbrial assembly family protein
FOY93_RS20765	COG4972	Pilus assembly protein
FOY93_RS20770	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FOY93_RS20775	COG0494	nUDIX hydrolase
FOY93_RS20785	COG1011	Hydrolase
FOY93_RS20790	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOY93_RS20795	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOY93_RS20800	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FOY93_RS20815	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOY93_RS20820	COG2183	response to ionizing radiation
FOY93_RS20825	COG1918	ferrous iron import across plasma membrane
FOY93_RS20850	COG1040	competence protein
FOY93_RS20860	COG2610	gluconate transmembrane transporter activity
FOY93_RS20865	COG1640	4-alpha-glucanotransferase
FOY93_RS20870	COG0058	SHG alpha-glucan phosphorylase activity
FOY93_RS20875	COG2909	trisaccharide binding
FOY93_RS20880	COG1349	DNA-binding transcription factor activity
FOY93_RS20885	COG0705	Rhomboid family
FOY93_RS20890	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOY93_RS20895	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FOY93_RS20900	COG0058	SHG alpha-glucan phosphorylase activity
FOY93_RS20905	COG0297	glycogen (starch) synthase activity
FOY93_RS20910	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FOY93_RS20915	COG1523	belongs to the glycosyl hydrolase 13 family
FOY93_RS20920	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOY93_RS20925	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOY93_RS20930	COG2095	MarC family integral membrane protein
FOY93_RS20935	COG0425	Belongs to the sulfur carrier protein TusA family
FOY93_RS20940	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOY93_RS20950	COG0477	Major facilitator Superfamily
FOY93_RS20955	COG0628	permease
FOY93_RS20965	COG2226	methyltransferase
FOY93_RS20985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOY93_RS20995	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FOY93_RS20995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOY93_RS21005	COG1216	Glycosyl transferase, family 2
FOY93_RS21030	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY93_RS21040	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS21045	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOY93_RS21090	COG3479	Phenolic acid decarboxylase
FOY93_RS21095	COG0583	DNA-binding transcription factor activity
FOY93_RS21100	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS21105	COG0791	NLP P60 protein
FOY93_RS21130	COG1414	Transcriptional regulator
FOY93_RS21135	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOY93_RS21140	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOY93_RS21145	COG2081	HI0933 family
FOY93_RS21150	COG0306	phosphate transporter
FOY93_RS21170	COG0589	response to stress
FOY93_RS21175	COG0742	ribosomal rna small subunit methyltransferase
FOY93_RS21180	COG0339	signal peptide processing
FOY93_RS21185	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOY93_RS21190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOY93_RS21205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOY93_RS21215	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS21220	COG0583	DNA-binding transcription factor activity
FOY93_RS21225	COG1295	ribonuclease BN
FOY93_RS21230	COG0477	Major facilitator Superfamily
FOY93_RS21235	COG2982	Protein involved in outer membrane biogenesis
FOY93_RS21240	COG2200	EAL domain
FOY93_RS21250	COG0612	Peptidase, M16
FOY93_RS21255	COG1301	dicarboxylic acid transport
FOY93_RS21260	COG2200	EAL domain
FOY93_RS21260	COG2199	diguanylate cyclase activity
FOY93_RS21265	COG3118	belongs to the thioredoxin family
FOY93_RS21265	COG0457	Tetratricopeptide repeat
FOY93_RS21270	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
FOY93_RS21275	COG1215	transferase activity, transferring glycosyl groups
FOY93_RS21280	COG1215	transferase activity, transferring glycosyl groups
FOY93_RS21305	COG2194	sulfuric ester hydrolase activity
FOY93_RS21320	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOY93_RS21350	COG1739	Uncharacterized protein family UPF0029
FOY93_RS21355	COG0006	proline dipeptidase activity
FOY93_RS21360	COG1024	Enoyl-CoA hydratase
FOY93_RS21360	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOY93_RS21365	COG0183	Belongs to the thiolase family
FOY93_RS21375	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOY93_RS21385	COG0084	hydrolase, TatD family'
FOY93_RS21390	COG0805	protein transport
FOY93_RS21400	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOY93_RS21405	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOY93_RS21410	COG3165	ubiquinone biosynthetic process from chorismate
FOY93_RS21415	COG2226	methyltransferase
FOY93_RS21420	COG1322	Protein conserved in bacteria
FOY93_RS21430	COG0412	Dienelactone hydrolase
FOY93_RS21435	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOY93_RS21440	COG0583	DNA-binding transcription factor activity
FOY93_RS21445	COG0697	spore germination
FOY93_RS21450	COG0561	phosphatase activity
FOY93_RS21455	COG2267	carboxylic ester hydrolase activity
FOY93_RS21465	COG1280	lysine exporter protein (LysE YggA)
FOY93_RS21495	COG0210	DNA helicase
FOY93_RS21500	COG1011	Hydrolase
FOY93_RS21535	COG0181	hydroxymethylbilane synthase activity
FOY93_RS21545	COG2959	enzyme of heme biosynthesis
FOY93_RS21550	COG3071	HemY protein
FOY93_RS21590	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FOY93_RS21605	COG2244	polysaccharide biosynthetic process
FOY93_RS21610	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOY93_RS21615	COG0456	acetyltransferase
FOY93_RS21620	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOY93_RS21625	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOY93_RS21635	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOY93_RS21640	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOY93_RS21645	COG3118	belongs to the thioredoxin family
FOY93_RS21655	COG0248	Ppx GppA phosphatase
FOY93_RS21665	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY93_RS21670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOY93_RS21680	COG0583	DNA-binding transcription factor activity
FOY93_RS21685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOY93_RS21695	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOY93_RS21700	COG3978	acetolactate synthase activity
FOY93_RS21715	COG0606	chelatase, subunit chli
FOY93_RS21720	COG3085	chromosome segregation
FOY93_RS21770	COG4206	TonB-dependent receptor
FOY93_RS21775	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOY93_RS21795	COG0583	DNA-binding transcription factor activity
FOY93_RS21800	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOY93_RS21805	COG2207	Transcriptional regulator
FOY93_RS21815	COG0371	Dehydrogenase
FOY93_RS21820	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FOY93_RS21830	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOY93_RS21835	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOY93_RS21845	COG0165	Argininosuccinate lyase
FOY93_RS21850	COG0527	aspartate kinase activity
FOY93_RS21850	COG0460	homoserine dehydrogenase
FOY93_RS21855	COG0626	cystathionine gamma-synthase activity
FOY93_RS21870	COG0254	rRNA binding
FOY93_RS21875	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOY93_RS21880	COG1609	Transcriptional regulator
FOY93_RS21885	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FOY93_RS21900	COG1575	Belongs to the MenA family. Type 1 subfamily
FOY93_RS21915	COG3074	FtsZ-dependent cytokinesis
FOY93_RS21925	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOY93_RS21930	COG1494	fructose-1,6-bisphosphatase
FOY93_RS21940	COG3152	Membrane
FOY93_RS21955	COG0149	triose-phosphate isomerase activity
FOY93_RS21965	COG2134	cdp-diacylglycerol pyrophosphatase
FOY93_RS21975	COG0205	6-phosphofructokinase activity
FOY93_RS21985	COG2314	TM2 domain
FOY93_RS21990	COG3678	ATP-independent chaperone mediated protein folding
FOY93_RS21995	COG0745	RESPONSE REGULATOR receiver
FOY93_RS22000	COG2205	protein histidine kinase activity
FOY93_RS22005	COG2258	MOSC domain
FOY93_RS22010	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOY93_RS22020	COG4977	sequence-specific DNA binding
FOY93_RS22020	COG1917	Cupin 2, conserved barrel domain protein
FOY93_RS22025	COG4977	sequence-specific DNA binding
FOY93_RS22030	COG1070	Carbohydrate kinase
FOY93_RS22035	COG4806	L-rhamnose isomerase
FOY93_RS22040	COG0235	Class ii aldolase
FOY93_RS22045	COG1454	alcohol dehydrogenase
FOY93_RS22050	COG3254	rhamnose metabolic process
FOY93_RS22055	COG2211	Major facilitator Superfamily
FOY93_RS22075	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FOY93_RS22100	COG0437	4 iron, 4 sulfur cluster binding
FOY93_RS22105	COG2864	formate dehydrogenase
FOY93_RS22110	COG3058	Necessary for formate dehydrogenase activity
FOY93_RS22120	COG0456	acetyltransferase
FOY93_RS22135	COG1011	Hydrolase
FOY93_RS22170	COG3852	Histidine kinase
FOY93_RS22185	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOY93_RS22195	COG3078	GTPase activator activity
FOY93_RS22210	COG0204	Acyl-transferase
FOY93_RS22220	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FOY93_RS22225	COG3084	Protein conserved in bacteria
FOY93_RS22230	COG0746	molybdenum cofactor guanylyltransferase activity
FOY93_RS22235	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOY93_RS22260	COG2186	Transcriptional regulator
FOY93_RS22265	COG0477	Major facilitator Superfamily
FOY93_RS22270	COG1609	Transcriptional regulator
FOY93_RS22275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOY93_RS22285	COG1172	Belongs to the binding-protein-dependent transport system permease family
FOY93_RS22290	COG1129	ABC transporter
FOY93_RS22295	COG1869	D-ribose catabolic process
FOY93_RS22300	COG3158	transport of potassium into the cell
FOY93_RS22310	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FOY93_RS22315	COG2502	aspartate--ammonia ligase
FOY93_RS22320	COG1522	sequence-specific DNA binding
FOY93_RS22325	COG0716	FMN binding
FOY93_RS22330	COG0445	tRNA wobble uridine modification
FOY93_RS22335	COG0357	Ribosomal RNA small subunit methyltransferase G
FOY93_RS22340	COG3312	ion transport
FOY93_RS22345	COG0356	it plays a direct role in the translocation of protons across the membrane
FOY93_RS22355	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FOY93_RS22360	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOY93_RS22365	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOY93_RS22370	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOY93_RS22375	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FOY93_RS22380	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOY93_RS22385	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOY93_RS22395	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOY93_RS22400	COG0573	inorganic phosphate transmembrane transporter activity
FOY93_RS22405	COG0581	inorganic phosphate transmembrane transporter activity
FOY93_RS22410	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOY93_RS22415	COG0704	Plays a role in the regulation of phosphate uptake
FOY93_RS22420	COG2382	esterase
FOY93_RS22425	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOY93_RS22430	COG2252	PERMEase
FOY93_RS22435	COG0431	NADPH-dependent FMN reductase
FOY93_RS22440	COG2091	lysine biosynthetic process via aminoadipic acid
FOY93_RS22455	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOY93_RS22460	COG0706	membrane insertase activity
FOY93_RS22510	COG2194	sulfuric ester hydrolase activity
FOY93_RS22550	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS22565	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS22585	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS22590	COG0778	Nitroreductase
FOY93_RS22665	COG4372	Transposase
FOY93_RS22670	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS22735	COG1192	Involved in chromosome partitioning
FOY93_RS22785	COG1475	DNA binding
FOY93_RS22820	COG3344	reverse transcriptase
FOY93_RS22885	COG4115	mRNA cleavage
FOY93_RS22910	COG2801	Transposase and inactivated derivatives
FOY93_RS22920	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOY93_RS22940	COG2801	Transposase and inactivated derivatives
FOY93_RS22945	COG2801	Transposase and inactivated derivatives
FOY93_RS22970	COG0583	DNA-binding transcription factor activity
FOY93_RS22985	COG3547	Transposase (IS116 IS110 IS902 family)
FOY93_RS22990	COG3344	reverse transcriptase
FOY93_RS23010	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS23040	COG2831	hemolysin activation secretion protein
FOY93_RS23055	COG3210	domain, Protein
FOY93_RS23100	COG3279	Response regulator of the LytR AlgR family
FOY93_RS23110	COG0583	DNA-binding transcription factor activity
FOY93_RS23115	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS23145	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS23200	COG1388	LysM domain
FOY93_RS23200	COG1470	cell adhesion involved in biofilm formation
FOY93_RS23225	COG3132	Protein of unknown function, DUF480
FOY93_RS23230	COG0673	inositol 2-dehydrogenase activity
FOY93_RS23270	COG4974	Belongs to the 'phage' integrase family
FOY93_RS23315	COG3436	PFAM IS66 Orf2 family protein
FOY93_RS23320	COG4372	Transposase
FOY93_RS23325	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOY93_RS23335	COG0625	glutathione transferase activity
FOY93_RS23340	COG1028	Short-chain dehydrogenase reductase Sdr
FOY93_RS23350	COG3344	reverse transcriptase