locus-tag	class	description
BMF08_RS00060	COG1403	HNH endonuclease
BMF08_RS00080	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMF08_RS00085	COG4725	Belongs to the MT-A70-like family
BMF08_RS00090	COG1802	Transcriptional regulator
BMF08_RS00090	COG4626	Terminase
BMF08_RS00135	COG0582	viral genome integration into host DNA
BMF08_RS00140	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS00195	COG0814	amino acid
BMF08_RS00200	COG2831	hemolysin activation secretion protein
BMF08_RS00210	COG3210	domain, Protein
BMF08_RS00255	COG0401	homolog of Blt101
BMF08_RS00290	COG4575	ribosome binding
BMF08_RS00300	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BMF08_RS00305	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BMF08_RS00330	COG4175	Glycine betaine
BMF08_RS00335	COG4176	ABC-type proline glycine betaine transport system permease component
BMF08_RS00345	COG2814	Major facilitator Superfamily
BMF08_RS00350	COG1846	Transcriptional regulator
BMF08_RS00355	COG1566	PFAM secretion protein HlyD family protein
BMF08_RS00360	COG2814	Major facilitator Superfamily
BMF08_RS00370	COG2918	glutathione biosynthetic process
BMF08_RS00375	COG1238	metal cluster binding
BMF08_RS00380	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMF08_RS00410	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BMF08_RS00420	COG2137	regulation of response to DNA damage stimulus
BMF08_RS00430	COG1546	Belongs to the CinA family
BMF08_RS00435	COG2951	lytic endotransglycosylase activity
BMF08_RS00440	COG3730	PTS system glucitol sorbitol-specific
BMF08_RS00445	COG3732	PTS system glucitol sorbitol-specific
BMF08_RS00455	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS00460	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS00465	COG1349	DNA-binding transcription factor activity
BMF08_RS00495	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BMF08_RS00500	COG3383	formate dehydrogenase (NAD+) activity
BMF08_RS00505	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BMF08_RS00510	COG1609	Transcriptional regulator
BMF08_RS00515	COG1263	PTS System
BMF08_RS00515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS00520	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS00525	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BMF08_RS00535	COG3260	NADH ubiquinone oxidoreductase 20
BMF08_RS00540	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BMF08_RS00545	COG3261	NADH dehydrogenase
BMF08_RS00545	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BMF08_RS00550	COG0650	Formate hydrogenlyase subunit 4
BMF08_RS00555	COG0651	ATP synthesis coupled electron transport
BMF08_RS00560	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BMF08_RS00570	COG0375	protein maturation
BMF08_RS00575	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BMF08_RS00580	COG0298	carbon dioxide binding
BMF08_RS00585	COG0409	Hydrogenase expression formation protein
BMF08_RS00590	COG0309	Hydrogenase expression formation protein (HypE)
BMF08_RS00610	COG1121	(ABC) transporter
BMF08_RS00615	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BMF08_RS00620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BMF08_RS00625	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BMF08_RS00630	COG3706	GGDEF domain
BMF08_RS00645	COG3685	Protein conserved in bacteria
BMF08_RS00650	COG3546	catalase activity
BMF08_RS00655	COG1546	Belongs to the CinA family
BMF08_RS00660	COG3729	General stress protein
BMF08_RS00665	COG3291	Pkd domain containing protein
BMF08_RS00665	COG3291	Pkd domain containing protein
BMF08_RS00675	COG0833	amino acid
BMF08_RS00680	COG2040	homocysteine
BMF08_RS00695	COG1764	response to oxidative stress
BMF08_RS00705	COG1388	LysM domain
BMF08_RS00705	COG4942	peptidase
BMF08_RS00715	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BMF08_RS00735	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BMF08_RS00765	COG2234	aminopeptidase activity
BMF08_RS00790	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BMF08_RS00795	COG0720	synthase
BMF08_RS00800	COG0602	queuosine metabolic process
BMF08_RS00805	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BMF08_RS00810	COG2190	(PTS) system
BMF08_RS00810	COG1263	PTS System
BMF08_RS00810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS00835	COG0148	phosphopyruvate hydratase activity
BMF08_RS00845	COG3956	TIGRFAM MazG family protein
BMF08_RS00850	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BMF08_RS00855	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMF08_RS00860	COG4999	Histidine kinase
BMF08_RS00860	COG3850	Histidine kinase
BMF08_RS00860	COG2205	protein histidine kinase activity
BMF08_RS00860	COG3437	response regulator, receiver
BMF08_RS00865	COG1929	Belongs to the glycerate kinase type-1 family
BMF08_RS00870	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS00875	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS00880	COG2271	Major facilitator Superfamily
BMF08_RS00885	COG0716	FMN binding
BMF08_RS00890	COG0564	pseudouridine synthase activity
BMF08_RS00895	COG3098	single-species biofilm formation
BMF08_RS00915	COG1611	Belongs to the LOG family
BMF08_RS00920	COG0814	amino acid
BMF08_RS00925	COG1760	l-serine dehydratase
BMF08_RS00940	COG2363	Small membrane protein
BMF08_RS00945	COG0583	DNA-binding transcription factor activity
BMF08_RS00955	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BMF08_RS00960	COG2166	iron-sulfur cluster assembly
BMF08_RS00965	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BMF08_RS00970	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BMF08_RS00990	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMF08_RS00995	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BMF08_RS00995	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BMF08_RS01000	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BMF08_RS01005	COG1074	ATP-dependent DNA helicase activity
BMF08_RS01015	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BMF08_RS01020	COG4967	type IV pilus modification protein PilV
BMF08_RS01030	COG4795	General secretion pathway protein
BMF08_RS01035	COG2165	general secretion pathway protein
BMF08_RS01055	COG0494	nUDIX hydrolase
BMF08_RS01065	COG0861	Integral membrane protein TerC family
BMF08_RS01075	COG0667	Aldo Keto reductase
BMF08_RS01080	COG0477	Major facilitator Superfamily
BMF08_RS01095	COG1609	Transcriptional regulator
BMF08_RS01105	COG2186	Transcriptional regulator
BMF08_RS01110	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS01115	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS01120	COG1609	Transcriptional regulator
BMF08_RS01130	COG0583	DNA-binding transcription factor activity
BMF08_RS01135	COG1794	racemase activity, acting on amino acids and derivatives
BMF08_RS01145	COG1175	transmembrane transport
BMF08_RS01150	COG0395	ABC-type sugar transport system, permease component
BMF08_RS01155	COG3842	ATPase activity
BMF08_RS01170	COG0739	heme binding
BMF08_RS01180	COG1459	type II secretion system
BMF08_RS01185	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BMF08_RS01205	COG4796	Type ii and iii secretion system protein
BMF08_RS01220	COG2165	general secretion pathway protein
BMF08_RS01225	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS01235	COG0823	Involved in the tonB-independent uptake of proteins
BMF08_RS01240	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BMF08_RS01245	COG0183	Belongs to the thiolase family
BMF08_RS01250	COG1464	Belongs to the NlpA lipoprotein family
BMF08_RS01255	COG2011	ABC-type metal ion transport system permease component
BMF08_RS01270	COG0626	cystathionine gamma-synthase activity
BMF08_RS01290	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS01295	COG1063	alcohol dehydrogenase
BMF08_RS01305	COG1129	ABC transporter
BMF08_RS01330	COG0439	Biotin carboxylase
BMF08_RS01340	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
BMF08_RS01345	COG1396	sequence-specific DNA binding
BMF08_RS01350	COG2388	GCN5-related N-acetyl-transferase
BMF08_RS01355	COG3592	Divergent 4Fe-4S mono-cluster
BMF08_RS01365	COG3539	Fimbrial protein
BMF08_RS01375	COG3188	usher protein
BMF08_RS01380	COG3188	usher protein
BMF08_RS01385	COG3121	Chaperone
BMF08_RS01390	COG0583	DNA-binding transcription factor activity
BMF08_RS01450	COG3250	beta-galactosidase activity
BMF08_RS01460	COG4942	peptidase
BMF08_RS01470	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BMF08_RS01480	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BMF08_RS01495	COG0716	FMN binding
BMF08_RS01505	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BMF08_RS01510	COG0354	folic acid binding
BMF08_RS01515	COG1272	protein, Hemolysin III
BMF08_RS01520	COG1737	Transcriptional regulator
BMF08_RS01525	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS01530	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS01550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BMF08_RS01560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BMF08_RS01565	COG0006	proline dipeptidase activity
BMF08_RS01590	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BMF08_RS01595	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BMF08_RS01610	COG0583	DNA-binding transcription factor activity
BMF08_RS01615	COG2968	Membrane
BMF08_RS01620	COG1279	arginine transmembrane transporter activity
BMF08_RS01625	COG0668	transmembrane transport
BMF08_RS01635	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BMF08_RS01640	COG0191	fructose-bisphosphate aldolase activity
BMF08_RS01650	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BMF08_RS01675	COG1122	ATPase activity
BMF08_RS01680	COG1122	ATPase activity
BMF08_RS01685	COG1263	PTS System
BMF08_RS01685	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS01700	COG0383	alpha-mannosidase activity
BMF08_RS01705	COG0586	Pfam SNARE associated Golgi protein
BMF08_RS01725	COG2160	L-arabinose isomerase activity
BMF08_RS01730	COG0235	Class ii aldolase
BMF08_RS01735	COG0417	DNA replication proofreading
BMF08_RS01740	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BMF08_RS01745	COG0564	pseudouridine synthase activity
BMF08_RS01755	COG3171	Protein conserved in bacteria
BMF08_RS01765	COG1194	a g-specific adenine glycosylase
BMF08_RS01780	COG1982	Orn Lys Arg decarboxylase major
BMF08_RS01785	COG1811	Na channel or pump
BMF08_RS01795	COG3122	Protein conserved in bacteria
BMF08_RS01810	COG0625	glutathione transferase activity
BMF08_RS01820	COG1349	DNA-binding transcription factor activity
BMF08_RS01825	COG0298	carbon dioxide binding
BMF08_RS01835	COG1773	rubredoxin
BMF08_RS01840	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BMF08_RS01845	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
BMF08_RS01850	COG5557	Pfam Polysulphide reductase, NrfD
BMF08_RS01855	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS01860	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
BMF08_RS01870	COG0667	Aldo Keto reductase
BMF08_RS01890	COG0848	biopolymer transport protein
BMF08_RS01900	COG0626	cystathionine gamma-synthase activity
BMF08_RS01905	COG0586	Pfam SNARE associated Golgi protein
BMF08_RS01910	COG2207	Transcriptional regulator
BMF08_RS01915	COG1979	alcohol dehydrogenase
BMF08_RS01925	COG1032	radical SAM domain protein
BMF08_RS01930	COG2132	Multicopper oxidase
BMF08_RS01935	COG0204	Acyl-transferase
BMF08_RS01940	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BMF08_RS01945	COG3111	PFAM Bacterial OB fold (BOF) protein
BMF08_RS01965	COG2249	NAD(P)H dehydrogenase (quinone) activity
BMF08_RS01970	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BMF08_RS01975	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BMF08_RS01980	COG2211	Major facilitator Superfamily
BMF08_RS01990	COG2207	Transcriptional regulator
BMF08_RS01990	COG1917	Cupin 2, conserved barrel domain protein
BMF08_RS02000	COG0187	DNA topoisomerase II activity
BMF08_RS02005	COG3150	esterase
BMF08_RS02010	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BMF08_RS02015	COG3151	Protein conserved in bacteria
BMF08_RS02020	COG0494	nUDIX hydrolase
BMF08_RS02025	COG1538	Outer membrane efflux protein
BMF08_RS02035	COG0754	glutathionylspermidine amidase activity
BMF08_RS02040	COG3384	dioxygenase
BMF08_RS02080	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BMF08_RS02080	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BMF08_RS02090	COG3025	triphosphatase activity
BMF08_RS02095	COG4991	sh3 domain protein
BMF08_RS02110	COG1968	undecaprenyl-diphosphatase activity
BMF08_RS02115	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BMF08_RS02130	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BMF08_RS02135	COG0358	DNA primase activity
BMF08_RS02145	COG3663	DNA glycosylase
BMF08_RS02290	COG4695	Portal protein
BMF08_RS02330	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BMF08_RS02365	COG4974	Belongs to the 'phage' integrase family
BMF08_RS02375	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS02380	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS02390	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BMF08_RS02420	COG3188	usher protein
BMF08_RS02425	COG3121	Chaperone
BMF08_RS02435	COG1737	Transcriptional regulator
BMF08_RS02440	COG1652	LysM domain
BMF08_RS02450	COG2375	cellular response to nickel ion
BMF08_RS02455	COG1695	Transcriptional regulator
BMF08_RS02465	COG0840	transmembrane signaling receptor activity
BMF08_RS02475	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
BMF08_RS02480	COG0366	Alpha amylase catalytic
BMF08_RS02485	COG0395	ABC-type sugar transport system, permease component
BMF08_RS02490	COG1175	transmembrane transport
BMF08_RS02500	COG3842	ATPase activity
BMF08_RS02510	COG1830	Aldolase
BMF08_RS02515	COG1879	ABC-type sugar transport system periplasmic component
BMF08_RS02525	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS02530	COG1129	ABC transporter
BMF08_RS02535	COG2390	Transcriptional regulator
BMF08_RS02540	COG1070	Carbohydrate kinase
BMF08_RS02545	COG0446	pyridine nucleotide-disulphide oxidoreductase
BMF08_RS02545	COG1902	pentaerythritol trinitrate reductase activity
BMF08_RS02555	COG1451	nucleotide metabolic process
BMF08_RS02560	COG0673	inositol 2-dehydrogenase activity
BMF08_RS02575	COG2721	sulfolactate sulfo-lyase activity
BMF08_RS02585	COG2271	Major facilitator Superfamily
BMF08_RS02590	COG2186	Transcriptional regulator
BMF08_RS02595	COG0586	Pfam SNARE associated Golgi protein
BMF08_RS02605	COG1422	Protein of unknown function (DUF1090)
BMF08_RS02610	COG4575	ribosome binding
BMF08_RS02615	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BMF08_RS02625	COG2259	Doxx family
BMF08_RS02630	COG0435	Glutathione S-transferase
BMF08_RS02640	COG1653	transport
BMF08_RS02645	COG0823	Involved in the tonB-independent uptake of proteins
BMF08_RS02655	COG3152	Membrane
BMF08_RS02660	COG0583	DNA-binding transcription factor activity
BMF08_RS02665	COG1741	Belongs to the pirin family
BMF08_RS02675	COG1929	Belongs to the glycerate kinase type-1 family
BMF08_RS02680	COG2084	Dehydrogenase
BMF08_RS02690	COG2721	sulfolactate sulfo-lyase activity
BMF08_RS02705	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS02710	COG3414	Phosphotransferase system galactitol-specific IIB component
BMF08_RS02715	COG3775	system Galactitol-specific IIC component
BMF08_RS02720	COG1063	alcohol dehydrogenase
BMF08_RS02735	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BMF08_RS02740	COG3107	peptidoglycan biosynthetic process
BMF08_RS02755	COG2823	Periplasmic or secreted lipoprotein
BMF08_RS02760	COG0701	Predicted permease
BMF08_RS02765	COG0702	epimerase
BMF08_RS02770	COG0693	protein deglycase activity
BMF08_RS02775	COG3787	Belongs to the UPF0306 family
BMF08_RS02785	COG3153	acetyltransferase
BMF08_RS02790	COG3154	lipid carrier protein
BMF08_RS02795	COG0826	peptidase U32
BMF08_RS02800	COG0826	peptidase U32
BMF08_RS02805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMF08_RS02810	COG0814	amino acid
BMF08_RS02815	COG0513	Belongs to the DEAD box helicase family
BMF08_RS02855	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BMF08_RS02860	COG0195	Participates in both transcription termination and antitermination
BMF08_RS02885	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BMF08_RS02895	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BMF08_RS02910	COG1534	Rna-binding protein
BMF08_RS02915	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BMF08_RS02920	COG2027	D-alanyl-D-alanine carboxypeptidase
BMF08_RS02930	COG0697	spore germination
BMF08_RS02945	COG0142	geranyltranstransferase activity
BMF08_RS02950	COG3423	Transcriptional regulator
BMF08_RS02960	COG5007	Belongs to the BolA IbaG family
BMF08_RS02965	COG3113	response to antibiotic
BMF08_RS02970	COG2854	intermembrane phospholipid transfer
BMF08_RS02975	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BMF08_RS02980	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BMF08_RS02985	COG1127	ABC transporter
BMF08_RS02990	COG0530	calcium, potassium:sodium antiporter activity
BMF08_RS03000	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BMF08_RS03005	COG3117	lipopolysaccharide transmembrane transporter activity
BMF08_RS03010	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BMF08_RS03015	COG1137	ATPase activity
BMF08_RS03040	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS03050	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BMF08_RS03055	COG0784	Response regulator, receiver
BMF08_RS03055	COG2198	Histidine kinase
BMF08_RS03055	COG5002	protein histidine kinase activity
BMF08_RS03060	COG1242	4 iron, 4 sulfur cluster binding
BMF08_RS03065	COG0069	glutamate synthase activity
BMF08_RS03065	COG0070	glutamate synthase
BMF08_RS03065	COG0067	glutamate synthase
BMF08_RS03070	COG0493	'glutamate synthase
BMF08_RS03080	COG2731	YhcH YjgK YiaL family protein
BMF08_RS03105	COG2969	positive regulation of protein catabolic process
BMF08_RS03110	COG0625	glutathione transferase activity
BMF08_RS03135	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BMF08_RS03140	COG3105	Protein conserved in bacteria
BMF08_RS03145	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BMF08_RS03150	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BMF08_RS03175	COG2732	(Barnase) inhibitor
BMF08_RS03185	COG1289	transmembrane transporter activity
BMF08_RS03200	COG0583	DNA-binding transcription factor activity
BMF08_RS03205	COG0312	modulator of DNA gyrase
BMF08_RS03210	COG3164	Protein of unknown function
BMF08_RS03225	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BMF08_RS03230	COG1792	Involved in formation and maintenance of cell shape
BMF08_RS03235	COG1077	Cell shape determining protein MreB Mrl
BMF08_RS03240	COG2200	EAL domain
BMF08_RS03240	COG2199	diguanylate cyclase activity
BMF08_RS03250	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BMF08_RS03265	COG0511	ligase activity, forming carbon-carbon bonds
BMF08_RS03270	COG0439	Biotin carboxylase
BMF08_RS03275	COG3924	membrane
BMF08_RS03280	COG4145	pantothenate transmembrane transporter activity
BMF08_RS03300	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BMF08_RS03315	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS03320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BMF08_RS03325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS03330	COG1309	transcriptional regulator
BMF08_RS03340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS03345	COG4597	amino acid ABC transporter
BMF08_RS03350	COG0765	amino acid transport
BMF08_RS03355	COG1126	abc transporter atp-binding protein
BMF08_RS03395	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BMF08_RS03415	COG0551	DNA topoisomerase type I activity
BMF08_RS03425	COG0758	DNA mediated transformation
BMF08_RS03455	COG3036	rescue of stalled ribosome
BMF08_RS03460	COG0789	Transcriptional regulator
BMF08_RS03465	COG0203	ribosomal protein L17
BMF08_RS03495	COG0201	protein transport
BMF08_RS03500	COG0200	Binds to the 23S rRNA
BMF08_RS03510	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BMF08_RS03525	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BMF08_RS03545	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BMF08_RS03560	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BMF08_RS03575	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BMF08_RS03600	COG0051	transcription antitermination factor activity, RNA binding
BMF08_RS03620	COG1450	Type ii and iii secretion system protein
BMF08_RS03625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BMF08_RS03630	COG1459	type II secretion system
BMF08_RS03635	COG2165	general secretion pathway protein
BMF08_RS03640	COG2165	general secretion pathway protein
BMF08_RS03645	COG2165	general secretion pathway protein
BMF08_RS03650	COG4795	General secretion pathway protein
BMF08_RS03655	COG3156	type II secretion system protein K
BMF08_RS03665	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BMF08_RS03670	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BMF08_RS03675	COG2193	ferroxidase activity
BMF08_RS03710	COG0049	tRNA binding
BMF08_RS03735	COG2964	Protein conserved in bacteria
BMF08_RS03740	COG0545	Peptidyl-prolyl cis-trans isomerase
BMF08_RS03750	COG1047	Peptidyl-prolyl cis-trans
BMF08_RS03755	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BMF08_RS03770	COG0488	(ABC) transporter
BMF08_RS03780	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BMF08_RS03790	COG0679	Auxin Efflux Carrier
BMF08_RS03820	COG0429	hydrolase of the alpha beta-hydrolase fold
BMF08_RS03830	COG3954	Phosphoribulokinase
BMF08_RS03835	COG1765	OsmC-like protein
BMF08_RS03845	COG1289	transmembrane transporter activity
BMF08_RS03855	COG0512	Glutamine amidotransferase of anthranilate synthase
BMF08_RS03860	COG2184	nucleotidyltransferase activity
BMF08_RS03880	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BMF08_RS03885	COG2146	nitrite reductase [NAD(P)H] activity
BMF08_RS03905	COG0180	Tryptophanyl-tRNA synthetase
BMF08_RS03915	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BMF08_RS03920	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BMF08_RS03925	COG3266	domain, Protein
BMF08_RS03945	COG4796	Type ii and iii secretion system protein
BMF08_RS03960	COG4972	Pilus assembly protein
BMF08_RS03965	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BMF08_RS03970	COG0494	nUDIX hydrolase
BMF08_RS03980	COG1011	Hydrolase
BMF08_RS03985	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BMF08_RS04010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BMF08_RS04015	COG2183	response to ionizing radiation
BMF08_RS04020	COG1918	ferrous iron import across plasma membrane
BMF08_RS04045	COG1040	competence protein
BMF08_RS04055	COG2610	gluconate transmembrane transporter activity
BMF08_RS04060	COG1640	4-alpha-glucanotransferase
BMF08_RS04065	COG0058	SHG alpha-glucan phosphorylase activity
BMF08_RS04075	COG1349	DNA-binding transcription factor activity
BMF08_RS04080	COG0705	Rhomboid family
BMF08_RS04090	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BMF08_RS04095	COG0058	SHG alpha-glucan phosphorylase activity
BMF08_RS04110	COG1523	belongs to the glycosyl hydrolase 13 family
BMF08_RS04125	COG2095	MarC family integral membrane protein
BMF08_RS04130	COG3265	gluconokinase activity
BMF08_RS04135	COG1609	Transcriptional regulator
BMF08_RS04140	COG1741	Belongs to the pirin family
BMF08_RS04145	COG0673	inositol 2-dehydrogenase activity
BMF08_RS04160	COG2190	(PTS) system
BMF08_RS04160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS04160	COG1263	PTS System
BMF08_RS04165	COG1349	DNA-binding transcription factor activity
BMF08_RS04170	COG1247	-acetyltransferase
BMF08_RS04175	COG0405	Gamma-glutamyltransferase
BMF08_RS04185	COG0584	glycerophosphoryl diester phosphodiesterase
BMF08_RS04210	COG0410	ABC transporter
BMF08_RS04215	COG0411	ABC transporter
BMF08_RS04220	COG4177	L-phenylalanine transmembrane transporter activity
BMF08_RS04230	COG0683	leucine binding
BMF08_RS04235	COG0456	acetyltransferase
BMF08_RS04255	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BMF08_RS04265	COG2177	Part of the ABC transporter FtsEX involved in
BMF08_RS04270	COG2884	Cell division ATP-binding protein ftsE
BMF08_RS04275	COG0552	protein localization to endoplasmic reticulum
BMF08_RS04280	COG0742	ribosomal rna small subunit methyltransferase
BMF08_RS04285	COG3776	membrane
BMF08_RS04290	COG3714	YhhN family
BMF08_RS04310	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BMF08_RS04315	COG0425	Belongs to the sulfur carrier protein TusA family
BMF08_RS04320	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BMF08_RS04330	COG0477	Major facilitator Superfamily
BMF08_RS04335	COG0628	permease
BMF08_RS04340	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS04390	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BMF08_RS04400	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BMF08_RS04410	COG3501	Rhs element vgr protein
BMF08_RS04440	COG2885	chlorophyll binding
BMF08_RS04465	COG0840	transmembrane signaling receptor activity
BMF08_RS04470	COG2081	HI0933 family
BMF08_RS04475	COG0306	phosphate transporter
BMF08_RS04485	COG0589	response to stress
BMF08_RS04495	COG0339	signal peptide processing
BMF08_RS04500	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BMF08_RS04505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BMF08_RS04520	COG0668	transmembrane transport
BMF08_RS04590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMF08_RS04595	COG3111	PFAM Bacterial OB fold (BOF) protein
BMF08_RS04600	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS04605	COG0583	DNA-binding transcription factor activity
BMF08_RS04610	COG1295	ribonuclease BN
BMF08_RS04615	COG0477	Major facilitator Superfamily
BMF08_RS04620	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BMF08_RS04625	COG0583	DNA-binding transcription factor activity
BMF08_RS04635	COG0561	phosphatase activity
BMF08_RS04640	COG2267	carboxylic ester hydrolase activity
BMF08_RS04645	COG1280	lysine exporter protein (LysE YggA)
BMF08_RS04655	COG1280	lysine exporter protein (LysE YggA)
BMF08_RS04665	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
BMF08_RS04690	COG1011	Hydrolase
BMF08_RS04700	COG3159	Protein conserved in bacteria
BMF08_RS04715	COG1965	Belongs to the frataxin family
BMF08_RS04735	COG2959	enzyme of heme biosynthesis
BMF08_RS04740	COG3071	HemY protein
BMF08_RS04785	COG2244	polysaccharide biosynthetic process
BMF08_RS04790	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BMF08_RS04795	COG0456	acetyltransferase
BMF08_RS04800	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BMF08_RS04805	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BMF08_RS04815	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BMF08_RS04820	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BMF08_RS04825	COG3118	belongs to the thioredoxin family
BMF08_RS04835	COG0248	Ppx GppA phosphatase
BMF08_RS04840	COG3977	Valine--pyruvate aminotransferase
BMF08_RS04860	COG2211	Major facilitator Superfamily
BMF08_RS04875	COG1940	carbohydrate kinase activity
BMF08_RS04880	COG3276	selenocysteine insertion sequence binding
BMF08_RS04890	COG0625	glutathione transferase activity
BMF08_RS04895	COG2213	PTS system mannitol-specific
BMF08_RS04895	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS04905	COG3722	fumarate hydratase activity
BMF08_RS04920	COG2186	Transcriptional regulator
BMF08_RS04930	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BMF08_RS04950	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BMF08_RS04955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BMF08_RS04965	COG4942	peptidase
BMF08_RS04970	COG2861	carbohydrate metabolic process
BMF08_RS04975	COG0463	Glycosyl transferase, family 2
BMF08_RS04985	COG0156	8-amino-7-oxononanoate synthase activity
BMF08_RS04995	COG0859	PFAM glycosyl transferase family 9
BMF08_RS05000	COG0859	PFAM glycosyl transferase family 9
BMF08_RS05005	COG0859	PFAM glycosyl transferase family 9
BMF08_RS05025	COG1216	Glycosyl transferase, family 2
BMF08_RS05040	COG1519	Transferase
BMF08_RS05060	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BMF08_RS05065	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BMF08_RS05075	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BMF08_RS05100	COG1561	YicC-like family, N-terminal region
BMF08_RS05105	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BMF08_RS05110	COG2860	membrane
BMF08_RS05130	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BMF08_RS05135	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMF08_RS05140	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BMF08_RS05145	COG2233	PERMEase
BMF08_RS05150	COG2982	Protein involved in outer membrane biogenesis
BMF08_RS05155	COG1501	Belongs to the glycosyl hydrolase 31 family
BMF08_RS05160	COG2211	Major facilitator Superfamily
BMF08_RS05185	COG1120	ATPase activity
BMF08_RS05190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMF08_RS05205	COG0583	DNA-binding transcription factor activity
BMF08_RS05225	COG3210	domain, Protein
BMF08_RS05230	COG1609	Transcriptional regulator
BMF08_RS05240	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS05240	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS05245	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS05250	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMF08_RS05255	COG4580	involved in the transport of maltose and maltodextrins
BMF08_RS05275	COG0738	Major facilitator superfamily
BMF08_RS05285	COG1349	DNA-binding transcription factor activity
BMF08_RS05290	COG0440	acetolactate synthase activity
BMF08_RS05295	COG0028	Belongs to the TPP enzyme family
BMF08_RS05340	COG2814	Major facilitator Superfamily
BMF08_RS05355	COG2149	membrane
BMF08_RS05360	COG3119	arylsulfatase activity
BMF08_RS05365	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMF08_RS05370	COG2207	Transcriptional regulator
BMF08_RS05385	COG2188	Transcriptional regulator
BMF08_RS05395	COG0071	Belongs to the small heat shock protein (HSP20) family
BMF08_RS05405	COG5645	(Lipo)protein
BMF08_RS05410	COG0823	Involved in the tonB-independent uptake of proteins
BMF08_RS05415	COG0561	phosphatase activity
BMF08_RS05420	COG0187	DNA topoisomerase II activity
BMF08_RS05425	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BMF08_RS05430	COG0592	DNA-directed DNA polymerase activity
BMF08_RS05460	COG0706	membrane insertase activity
BMF08_RS05470	COG1278	Cold shock
BMF08_RS05475	COG2091	lysine biosynthetic process via aminoadipic acid
BMF08_RS05480	COG2252	PERMEase
BMF08_RS05485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMF08_RS05490	COG0704	Plays a role in the regulation of phosphate uptake
BMF08_RS05500	COG0581	inorganic phosphate transmembrane transporter activity
BMF08_RS05505	COG0573	inorganic phosphate transmembrane transporter activity
BMF08_RS05510	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BMF08_RS05520	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BMF08_RS05525	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BMF08_RS05530	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BMF08_RS05535	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BMF08_RS05540	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BMF08_RS05545	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BMF08_RS05565	COG3312	ion transport
BMF08_RS05580	COG0716	FMN binding
BMF08_RS05585	COG1522	sequence-specific DNA binding
BMF08_RS05610	COG1869	D-ribose catabolic process
BMF08_RS05620	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS05625	COG1879	ABC-type sugar transport system periplasmic component
BMF08_RS05630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMF08_RS05635	COG1609	Transcriptional regulator
BMF08_RS05640	COG0477	Major facilitator Superfamily
BMF08_RS05645	COG2186	Transcriptional regulator
BMF08_RS05670	COG1763	Mo-molybdopterin cofactor biosynthetic process
BMF08_RS05675	COG0746	molybdenum cofactor guanylyltransferase activity
BMF08_RS05680	COG3084	Protein conserved in bacteria
BMF08_RS05695	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMF08_RS05695	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMF08_RS05710	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BMF08_RS05720	COG3852	Histidine kinase
BMF08_RS05750	COG1501	Belongs to the glycosyl hydrolase 31 family
BMF08_RS05760	COG3684	Belongs to the aldolase LacD family
BMF08_RS05770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMF08_RS05775	COG1349	DNA-binding transcription factor activity
BMF08_RS05815	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMF08_RS05825	COG1011	Hydrolase
BMF08_RS05835	COG1490	D-aminoacyl-tRNA deacylase activity
BMF08_RS05840	COG0456	acetyltransferase
BMF08_RS05850	COG3609	addiction module antidote protein, CC2985 family
BMF08_RS05860	COG2864	formate dehydrogenase
BMF08_RS05865	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS05885	COG3711	transcriptional antiterminator
BMF08_RS05885	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS05890	COG1363	Peptidase, m42
BMF08_RS05895	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS05895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS05900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS05920	COG2211	Major facilitator Superfamily
BMF08_RS05925	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS05930	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS05935	COG0383	alpha-mannosidase activity
BMF08_RS05955	COG3254	rhamnose metabolic process
BMF08_RS05960	COG1454	alcohol dehydrogenase
BMF08_RS05970	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS05975	COG1129	ABC transporter
BMF08_RS05985	COG0235	Class ii aldolase
BMF08_RS05995	COG1070	Carbohydrate kinase
BMF08_RS06010	COG4977	sequence-specific DNA binding
BMF08_RS06010	COG1917	Cupin 2, conserved barrel domain protein
BMF08_RS06015	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BMF08_RS06020	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BMF08_RS06025	COG2258	MOSC domain
BMF08_RS06030	COG2205	protein histidine kinase activity
BMF08_RS06035	COG0745	RESPONSE REGULATOR receiver
BMF08_RS06040	COG3678	ATP-independent chaperone mediated protein folding
BMF08_RS06070	COG0149	triose-phosphate isomerase activity
BMF08_RS06080	COG3152	Membrane
BMF08_RS06090	COG1494	fructose-1,6-bisphosphatase
BMF08_RS06100	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BMF08_RS06105	COG3074	FtsZ-dependent cytokinesis
BMF08_RS06125	COG1575	Belongs to the MenA family. Type 1 subfamily
BMF08_RS06135	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BMF08_RS06140	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BMF08_RS06145	COG1609	Transcriptional regulator
BMF08_RS06150	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BMF08_RS06160	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
BMF08_RS06165	COG0626	cystathionine gamma-synthase activity
BMF08_RS06170	COG0527	aspartate kinase activity
BMF08_RS06170	COG0460	homoserine dehydrogenase
BMF08_RS06175	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BMF08_RS06180	COG0371	Dehydrogenase
BMF08_RS06190	COG2207	Transcriptional regulator
BMF08_RS06195	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BMF08_RS06205	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BMF08_RS06225	COG3979	chitinase
BMF08_RS06230	COG0583	DNA-binding transcription factor activity
BMF08_RS06255	COG4206	TonB-dependent receptor
BMF08_RS06305	COG3085	chromosome segregation
BMF08_RS06325	COG3978	acetolactate synthase activity
BMF08_RS06330	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BMF08_RS06340	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BMF08_RS06345	COG0583	DNA-binding transcription factor activity
BMF08_RS06365	COG0366	Alpha amylase catalytic
BMF08_RS06375	COG2992	FlgJ-related protein
BMF08_RS06380	COG2207	Transcriptional regulator
BMF08_RS06380	COG1609	Transcriptional regulator
BMF08_RS06385	COG4214	carbohydrate transport
BMF08_RS06395	COG4213	ABC transporter substrate-binding protein
BMF08_RS06405	COG2115	Belongs to the xylose isomerase family
BMF08_RS06410	COG1070	Carbohydrate kinase
BMF08_RS06425	COG3274	enterobacterial common antigen metabolic process
BMF08_RS06445	COG2944	sequence-specific DNA binding
BMF08_RS06455	COG1278	Cold shock
BMF08_RS06470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMF08_RS06480	COG1609	Transcriptional regulator
BMF08_RS06485	COG2885	chlorophyll binding
BMF08_RS06490	COG0243	molybdopterin cofactor binding
BMF08_RS06495	COG0456	acetyltransferase
BMF08_RS06500	COG2818	Glycosylase
BMF08_RS06505	COG5571	outer membrane autotransporter
BMF08_RS06515	COG2223	nitrite transmembrane transporter activity
BMF08_RS06540	COG0747	negative chemotaxis
BMF08_RS06545	COG0601	transmembrane transport
BMF08_RS06550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMF08_RS06555	COG0444	Belongs to the ABC transporter superfamily
BMF08_RS06560	COG4608	Belongs to the ABC transporter superfamily
BMF08_RS06630	COG1215	transferase activity, transferring glycosyl groups
BMF08_RS06635	COG3118	belongs to the thioredoxin family
BMF08_RS06635	COG0457	Tetratricopeptide repeat
BMF08_RS06640	COG2200	EAL domain
BMF08_RS06640	COG2199	diguanylate cyclase activity
BMF08_RS06650	COG0612	Peptidase, M16
BMF08_RS06660	COG2200	EAL domain
BMF08_RS06665	COG2982	Protein involved in outer membrane biogenesis
BMF08_RS06680	COG0395	ABC-type sugar transport system, permease component
BMF08_RS06690	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BMF08_RS06695	COG0406	alpha-ribazole phosphatase activity
BMF08_RS06710	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS06715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS06715	COG2190	(PTS) system
BMF08_RS06715	COG1263	PTS System
BMF08_RS06720	COG0412	Dienelactone hydrolase
BMF08_RS06740	COG3165	ubiquinone biosynthetic process from chorismate
BMF08_RS06745	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BMF08_RS06755	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BMF08_RS06760	COG0805	protein transport
BMF08_RS06765	COG0084	hydrolase, TatD family'
BMF08_RS06805	COG1739	Uncharacterized protein family UPF0029
BMF08_RS06840	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BMF08_RS06885	COG0250	Participates in transcription elongation, termination and antitermination
BMF08_RS06905	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BMF08_RS06925	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMF08_RS06945	COG2104	thiamine diphosphate biosynthetic process
BMF08_RS06950	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BMF08_RS06965	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BMF08_RS07000	COG0151	Belongs to the GarS family
BMF08_RS07045	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BMF08_RS07070	COG1283	sodium-dependent phosphate transmembrane transporter activity
BMF08_RS07085	COG1187	pseudouridine synthase activity
BMF08_RS07095	COG0527	aspartate kinase activity
BMF08_RS07120	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BMF08_RS07125	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS07125	COG1263	PTS System
BMF08_RS07135	COG1446	asparaginase
BMF08_RS07140	COG1609	Transcriptional regulator
BMF08_RS07145	COG3223	Belongs to the PsiE family
BMF08_RS07175	COG4580	involved in the transport of maltose and maltodextrins
BMF08_RS07195	COG2937	Belongs to the GPAT DAPAT family
BMF08_RS07200	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BMF08_RS07210	COG0534	Mate efflux family protein
BMF08_RS07215	COG3237	CsbD-like
BMF08_RS07220	COG0735	belongs to the Fur family
BMF08_RS07235	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BMF08_RS07260	COG1448	Aminotransferase
BMF08_RS07265	COG3700	Belongs to the class B bacterial acid phosphatase family
BMF08_RS07270	COG2315	Protein conserved in bacteria
BMF08_RS07295	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BMF08_RS07305	COG0789	Transcriptional regulator
BMF08_RS07310	COG0625	glutathione transferase activity
BMF08_RS07315	COG2252	PERMEase
BMF08_RS07320	COG0025	NhaP-type Na H and K H
BMF08_RS07325	COG0673	inositol 2-dehydrogenase activity
BMF08_RS07330	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMF08_RS07335	COG3162	membrane
BMF08_RS07345	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BMF08_RS07350	COG1301	dicarboxylic acid transport
BMF08_RS07360	COG0747	negative chemotaxis
BMF08_RS07365	COG0601	transmembrane transport
BMF08_RS07370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMF08_RS07390	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BMF08_RS07395	COG2824	Alkylphosphonate utilization operon protein PhnA
BMF08_RS07420	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BMF08_RS07425	COG3647	Membrane
BMF08_RS07440	COG2337	Toxic component of a toxin-antitoxin (TA) module
BMF08_RS07445	COG2336	PFAM SpoVT AbrB
BMF08_RS07475	COG1309	transcriptional regulator
BMF08_RS07490	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BMF08_RS07495	COG1027	Aspartate ammonia-lyase
BMF08_RS07500	COG3030	protein affecting phage T7 exclusion by the F plasmid
BMF08_RS07505	COG0531	amino acid
BMF08_RS07535	COG1509	lysine 2,3-aminomutase activity
BMF08_RS07545	COG5510	response to toxic substance
BMF08_RS07575	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BMF08_RS07580	COG1053	succinate dehydrogenase
BMF08_RS07590	COG1511	domain protein
BMF08_RS07590	COG3264	Mechanosensitive ion channel
BMF08_RS07625	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BMF08_RS07630	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BMF08_RS07630	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BMF08_RS07635	COG0802	atpase or kinase
BMF08_RS07640	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMF08_RS07650	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BMF08_RS07660	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BMF08_RS07665	COG0330	HflC and HflK could
BMF08_RS07670	COG0330	HflC and HflK could
BMF08_RS07675	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BMF08_RS07690	COG0557	exoribonuclease II activity
BMF08_RS07695	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BMF08_RS07710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMF08_RS07715	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BMF08_RS07725	COG0747	negative chemotaxis
BMF08_RS07730	COG0601	transmembrane transport
BMF08_RS07740	COG0444	Belongs to the ABC transporter superfamily
BMF08_RS07750	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMF08_RS07765	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BMF08_RS07770	COG1960	acyl-CoA dehydrogenase activity
BMF08_RS07775	COG0840	transmembrane signaling receptor activity
BMF08_RS07785	COG3650	response to hydrogen peroxide
BMF08_RS07790	COG1073	alpha beta
BMF08_RS07805	COG3037	sugar-specific permease SgaT UlaA
BMF08_RS07835	COG0360	Binds together with S18 to 16S ribosomal RNA
BMF08_RS07840	COG2965	DNA replication, synthesis of RNA primer
BMF08_RS07845	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BMF08_RS07860	COG3061	Opacity-associated protein A
BMF08_RS07865	COG0545	Peptidyl-prolyl cis-trans isomerase
BMF08_RS07870	COG1113	amino acid transport
BMF08_RS07880	COG0840	transmembrane signaling receptor activity
BMF08_RS07885	COG0697	spore germination
BMF08_RS07895	COG0702	epimerase
BMF08_RS07900	COG1733	regulation of RNA biosynthetic process
BMF08_RS07910	COG1218	3'(2'),5'-bisphosphate nucleotidase
BMF08_RS07915	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BMF08_RS07925	COG1253	flavin adenine dinucleotide binding
BMF08_RS07930	COG0673	inositol 2-dehydrogenase activity
BMF08_RS07940	COG0673	inositol 2-dehydrogenase activity
BMF08_RS07955	COG0729	surface antigen
BMF08_RS07960	COG2911	Protein conserved in bacteria
BMF08_RS07965	COG2105	PFAM AIG2 family protein
BMF08_RS07980	COG1879	ABC-type sugar transport system periplasmic component
BMF08_RS07985	COG1129	ABC transporter
BMF08_RS07990	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS07995	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS08000	COG0840	transmembrane signaling receptor activity
BMF08_RS08010	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BMF08_RS08020	COG0312	modulator of DNA gyrase
BMF08_RS08055	COG3964	amidohydrolase
BMF08_RS08070	COG3711	transcriptional antiterminator
BMF08_RS08070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS08085	COG0602	queuosine metabolic process
BMF08_RS08095	COG0366	Alpha amylase catalytic
BMF08_RS08100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS08100	COG1263	PTS System
BMF08_RS08110	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BMF08_RS08120	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BMF08_RS08135	COG1438	arginine binding
BMF08_RS08140	COG1288	antiporter activity
BMF08_RS08145	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BMF08_RS08155	COG2235	arginine
BMF08_RS08160	COG2731	YhcH YjgK YiaL family protein
BMF08_RS08165	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BMF08_RS08170	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
BMF08_RS08185	COG4269	membrane
BMF08_RS08200	COG2927	DNA polymerase III (CHI subunit)
BMF08_RS08205	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BMF08_RS08215	COG0795	lipopolysaccharide-transporting ATPase activity
BMF08_RS08220	COG0795	lipopolysaccharide-transporting ATPase activity
BMF08_RS08230	COG1064	alcohol dehydrogenase
BMF08_RS08235	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BMF08_RS08295	COG1715	Restriction endonuclease
BMF08_RS08360	COG3423	Transcriptional regulator
BMF08_RS08370	COG1309	transcriptional regulator
BMF08_RS08375	COG2249	NAD(P)H dehydrogenase (quinone) activity
BMF08_RS08385	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BMF08_RS08395	COG2850	peptidyl-arginine hydroxylation
BMF08_RS08400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMF08_RS08405	COG5457	Domain of unknown function (DUF1127)
BMF08_RS08410	COG1566	PFAM secretion protein HlyD family protein
BMF08_RS08420	COG2733	membrane
BMF08_RS08435	COG1012	belongs to the aldehyde dehydrogenase family
BMF08_RS08445	COG0523	cobalamin synthesis protein
BMF08_RS08450	COG2879	small protein
BMF08_RS08455	COG1966	Carbon starvation protein
BMF08_RS08465	COG0840	transmembrane signaling receptor activity
BMF08_RS08480	COG1484	DNA-dependent DNA replication
BMF08_RS08490	COG1764	response to oxidative stress
BMF08_RS08495	COG1846	Transcriptional regulator
BMF08_RS08500	COG1309	transcriptional regulator
BMF08_RS08510	COG2966	Psort location CytoplasmicMembrane, score
BMF08_RS08515	COG2197	response regulator
BMF08_RS08520	COG2197	response regulator
BMF08_RS08525	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BMF08_RS08530	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS08535	COG4114	ferric iron reductase
BMF08_RS08540	COG3706	GGDEF domain
BMF08_RS08570	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BMF08_RS08575	COG0456	acetyltransferase
BMF08_RS08580	COG1011	Hydrolase
BMF08_RS08590	COG2823	Periplasmic or secreted lipoprotein
BMF08_RS08600	COG4667	esterase of the alpha-beta hydrolase superfamily
BMF08_RS08605	COG0084	hydrolase, TatD family'
BMF08_RS08610	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BMF08_RS08615	COG1328	CTP reductase activity
BMF08_RS08620	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BMF08_RS08625	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BMF08_RS08655	COG1122	ATPase activity
BMF08_RS08665	COG0560	Phosphoserine phosphatase
BMF08_RS08680	COG0488	(ABC) transporter
BMF08_RS08690	COG0741	lytic transglycosylase activity
BMF08_RS08710	COG2207	Transcriptional regulator
BMF08_RS08710	COG3708	Transcriptional regulator
BMF08_RS08715	COG3045	CreA protein
BMF08_RS08720	COG0745	RESPONSE REGULATOR receiver
BMF08_RS08730	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BMF08_RS08740	COG0460	homoserine dehydrogenase
BMF08_RS08740	COG0527	aspartate kinase activity
BMF08_RS08750	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BMF08_RS08760	COG1115	amino acid carrier protein
BMF08_RS08770	COG0521	Mo-molybdopterin cofactor biosynthetic process
BMF08_RS08785	COG1584	GPR1 FUN34 yaaH family protein
BMF08_RS08805	COG0583	DNA-binding transcription factor activity
BMF08_RS08820	COG0196	riboflavin kinase activity
BMF08_RS08835	COG1047	Peptidyl-prolyl cis-trans
BMF08_RS08845	COG2140	Oxalate decarboxylase
BMF08_RS08855	COG3716	PTS system mannose fructose sorbose family IID component
BMF08_RS08860	COG3715	PTS system
BMF08_RS08865	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS08865	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS08880	COG0383	alpha-mannosidase activity
BMF08_RS08885	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS08890	COG1609	Transcriptional regulator
BMF08_RS08900	COG0505	Belongs to the CarA family
BMF08_RS08905	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BMF08_RS08950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BMF08_RS08955	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BMF08_RS08960	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BMF08_RS08965	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BMF08_RS08980	COG0762	integral membrane protein
BMF08_RS08985	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BMF08_RS08990	COG2805	Type II/IV secretion system protein
BMF08_RS09005	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BMF08_RS09020	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BMF08_RS09025	COG2356	endonuclease I
BMF08_RS09035	COG2814	Major facilitator Superfamily
BMF08_RS09040	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BMF08_RS09055	COG1166	arginine decarboxylase activity
BMF08_RS09065	COG0501	Belongs to the peptidase M48B family
BMF08_RS09070	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BMF08_RS09075	COG1737	Transcriptional regulator
BMF08_RS09085	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS09095	COG1178	ABC-type Fe3 transport system permease component
BMF08_RS09130	COG2814	Major facilitator Superfamily
BMF08_RS09165	COG0028	Belongs to the TPP enzyme family
BMF08_RS09195	COG0768	penicillin binding
BMF08_RS09200	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BMF08_RS09205	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BMF08_RS09210	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BMF08_RS09220	COG0772	Belongs to the SEDS family
BMF08_RS09235	COG1181	Belongs to the D-alanine--D-alanine ligase family
BMF08_RS09245	COG0849	cell division
BMF08_RS09250	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BMF08_RS09270	COG0494	nUDIX hydrolase
BMF08_RS09295	COG1459	type II secretion system
BMF08_RS09300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BMF08_RS09305	COG4969	Belongs to the N-Me-Phe pilin family
BMF08_RS09320	COG3023	N-Acetylmuramoyl-L-alanine amidase
BMF08_RS09325	COG3725	Membrane protein required for beta-lactamase induction
BMF08_RS09330	COG3940	Belongs to the glycosyl hydrolase 43 family
BMF08_RS09335	COG2211	Major facilitator Superfamily
BMF08_RS09340	COG1113	amino acid transport
BMF08_RS09355	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BMF08_RS09360	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMF08_RS09365	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BMF08_RS09375	COG3064	Membrane
BMF08_RS09410	COG2132	Multicopper oxidase
BMF08_RS09415	COG4993	Dehydrogenase
BMF08_RS09425	COG0288	reversible hydration of carbon dioxide
BMF08_RS09430	COG1131	(ABC) transporter
BMF08_RS09435	COG0842	Transport permease protein
BMF08_RS09440	COG0726	polysaccharide deacetylase
BMF08_RS09455	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BMF08_RS09460	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BMF08_RS09465	COG0617	tRNA 3'-terminal CCA addition
BMF08_RS09480	COG1489	DNA binding
BMF08_RS09485	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BMF08_RS09490	COG1643	Atp-dependent helicase
BMF08_RS09495	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BMF08_RS09505	COG3121	Chaperone
BMF08_RS09510	COG3188	usher protein
BMF08_RS09525	COG4774	siderophore transport
BMF08_RS09530	COG1120	ATPase activity
BMF08_RS09535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BMF08_RS09540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMF08_RS09545	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BMF08_RS09560	COG2860	membrane
BMF08_RS09575	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BMF08_RS09585	COG3835	regulator
BMF08_RS09630	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BMF08_RS09640	COG0575	Belongs to the CDS family
BMF08_RS09650	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BMF08_RS09665	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BMF08_RS09685	COG0587	DNA-directed DNA polymerase activity
BMF08_RS09695	COG1982	Orn Lys Arg decarboxylase major
BMF08_RS09700	COG0346	lactoylglutathione lyase activity
BMF08_RS09705	COG0037	tRNA processing
BMF08_RS09710	COG4568	rho-dependent transcription termination
BMF08_RS09720	COG4681	YaeQ
BMF08_RS09725	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BMF08_RS09735	COG1720	tRNA m6t6A37 methyltransferase activity
BMF08_RS09745	COG1464	Belongs to the NlpA lipoprotein family
BMF08_RS09750	COG2011	ABC-type metal ion transport system permease component
BMF08_RS09760	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BMF08_RS09805	COG0577	efflux transmembrane transporter activity
BMF08_RS09805	COG1136	(ABC) transporter
BMF08_RS09810	COG1136	(ABC) transporter
BMF08_RS09810	COG0577	efflux transmembrane transporter activity
BMF08_RS09840	COG0583	DNA-binding transcription factor activity
BMF08_RS09845	COG3021	interspecies interaction between organisms
BMF08_RS09850	COG2226	methyltransferase
BMF08_RS09855	COG1388	LysM domain
BMF08_RS09855	COG0741	lytic transglycosylase activity
BMF08_RS09865	COG2226	methyltransferase
BMF08_RS09875	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BMF08_RS09885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMF08_RS09900	COG0121	glutamine amidotransferase
BMF08_RS09905	COG3034	peptidoglycan biosynthetic process
BMF08_RS09915	COG2195	Cleaves the N-terminal amino acid of tripeptides
BMF08_RS09920	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BMF08_RS09935	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BMF08_RS09950	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BMF08_RS09960	COG0582	viral genome integration into host DNA
BMF08_RS09990	COG0583	DNA-binding transcription factor activity
BMF08_RS09995	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BMF08_RS10000	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BMF08_RS10005	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BMF08_RS10010	COG2080	2 iron, 2 sulfur cluster binding
BMF08_RS10015	COG0641	radical SAM
BMF08_RS10020	COG3119	arylsulfatase activity
BMF08_RS10035	COG0814	amino acid
BMF08_RS10050	COG4566	intracellular signal transduction
BMF08_RS10070	COG0740	serine-type endopeptidase activity
BMF08_RS10090	COG1309	transcriptional regulator
BMF08_RS10100	COG3685	Protein conserved in bacteria
BMF08_RS10120	COG2200	EAL domain
BMF08_RS10135	COG4303	Ethanolamine ammonia lyase large subunit
BMF08_RS10140	COG0531	amino acid
BMF08_RS10155	COG1215	transferase activity, transferring glycosyl groups
BMF08_RS10160	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BMF08_RS10170	COG0113	porphobilinogen synthase activity
BMF08_RS10180	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BMF08_RS10185	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BMF08_RS10195	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BMF08_RS10240	COG3706	GGDEF domain
BMF08_RS10245	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BMF08_RS10255	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BMF08_RS10265	COG4126	flavin adenine dinucleotide binding
BMF08_RS10270	COG3123	guanosine phosphorylase activity
BMF08_RS10280	COG1940	carbohydrate kinase activity
BMF08_RS10285	COG2814	Major facilitator Superfamily
BMF08_RS10290	COG0419	ATPase involved in DNA repair
BMF08_RS10295	COG0420	3'-5' exonuclease activity
BMF08_RS10305	COG5002	protein histidine kinase activity
BMF08_RS10320	COG0366	Alpha amylase catalytic
BMF08_RS10335	COG0450	alkyl hydroperoxide reductase
BMF08_RS10340	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BMF08_RS10345	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BMF08_RS10355	COG1862	Preprotein translocase
BMF08_RS10365	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BMF08_RS10370	COG3248	Nucleoside-binding outer membrane protein
BMF08_RS10375	COG4238	major outer membrane lipoprotein
BMF08_RS10385	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BMF08_RS10385	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BMF08_RS10390	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BMF08_RS10400	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BMF08_RS10405	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BMF08_RS10410	COG0667	Aldo Keto reductase
BMF08_RS10420	COG0142	geranyltranstransferase activity
BMF08_RS10440	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BMF08_RS10445	COG1666	GTP binding
BMF08_RS10455	COG2211	Major facilitator Superfamily
BMF08_RS10465	COG1069	ribulokinase activity
BMF08_RS10475	COG2814	Major facilitator Superfamily
BMF08_RS10480	COG0109	protoheme IX farnesyltransferase activity
BMF08_RS10485	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BMF08_RS10490	COG1845	cytochrome c oxidase, subunit III
BMF08_RS10495	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BMF08_RS10500	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BMF08_RS10505	COG2223	nitrite transmembrane transporter activity
BMF08_RS10510	COG3056	Lipoprotein
BMF08_RS10515	COG0271	Belongs to the BolA IbaG family
BMF08_RS10540	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BMF08_RS10545	COG0776	regulation of translation
BMF08_RS10550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BMF08_RS10555	COG1555	photosystem II stabilization
BMF08_RS10560	COG0824	Thioesterase
BMF08_RS10570	COG4533	DNA binding
BMF08_RS10585	COG1522	sequence-specific DNA binding
BMF08_RS10590	COG1132	(ABC) transporter
BMF08_RS10595	COG1132	(ABC) transporter
BMF08_RS10600	COG0347	Belongs to the P(II) protein family
BMF08_RS10605	COG0004	ammonium transporteR
BMF08_RS10615	COG1946	Acyl-CoA thioesterase
BMF08_RS10620	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BMF08_RS10625	COG3695	enzyme binding
BMF08_RS10645	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMF08_RS10650	COG2364	Membrane
BMF08_RS10655	COG1609	Transcriptional regulator
BMF08_RS10660	COG3250	beta-galactosidase activity
BMF08_RS10665	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BMF08_RS10670	COG2188	Transcriptional regulator
BMF08_RS10675	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS10680	COG1263	PTS System
BMF08_RS10680	COG2190	(PTS) system
BMF08_RS10680	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS10690	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BMF08_RS10700	COG0110	maltose O-acetyltransferase activity
BMF08_RS10715	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS10720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BMF08_RS10725	COG1309	transcriptional regulator
BMF08_RS10730	COG3264	Mechanosensitive ion channel
BMF08_RS10730	COG1196	nuclear chromosome segregation
BMF08_RS10740	COG3923	Primosomal replication protein n
BMF08_RS10745	COG2832	Protein of unknown function (DUF454)
BMF08_RS10790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMF08_RS10795	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BMF08_RS10795	COG4651	solute:proton antiporter activity
BMF08_RS10800	COG2223	nitrite transmembrane transporter activity
BMF08_RS10810	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BMF08_RS10815	COG3735	TraB family
BMF08_RS10830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS10830	COG1263	PTS System
BMF08_RS10835	COG3119	arylsulfatase activity
BMF08_RS10840	COG1585	Membrane protein implicated in regulation of membrane protease activity
BMF08_RS10845	COG0330	HflC and HflK could
BMF08_RS10850	COG3118	belongs to the thioredoxin family
BMF08_RS10855	COG0300	oxidoreductase activity
BMF08_RS10860	COG2755	lipolytic protein G-D-S-L family
BMF08_RS10865	COG4181	ATPase activity
BMF08_RS10870	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BMF08_RS10875	COG1464	Belongs to the NlpA lipoprotein family
BMF08_RS10895	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BMF08_RS10900	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BMF08_RS10915	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BMF08_RS10925	COG1609	Transcriptional regulator
BMF08_RS10930	COG2190	(PTS) system
BMF08_RS10930	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS10930	COG1263	PTS System
BMF08_RS10935	COG2501	S4 domain
BMF08_RS10940	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BMF08_RS10950	COG2864	formate dehydrogenase
BMF08_RS10955	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS10980	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS10980	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS10980	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS10985	COG0383	alpha-mannosidase activity
BMF08_RS10990	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMF08_RS11005	COG0583	DNA-binding transcription factor activity
BMF08_RS11015	COG0628	permease
BMF08_RS11065	COG1113	amino acid transport
BMF08_RS11070	COG2211	Major facilitator Superfamily
BMF08_RS11080	COG0673	inositol 2-dehydrogenase activity
BMF08_RS11085	COG1609	Transcriptional regulator
BMF08_RS11105	COG2315	Protein conserved in bacteria
BMF08_RS11130	COG0860	N-Acetylmuramoyl-L-alanine amidase
BMF08_RS11150	COG2837	iron assimilation
BMF08_RS11155	COG4150	thiosulfate binding
BMF08_RS11160	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BMF08_RS11165	COG4208	sulfate ABC transporter
BMF08_RS11170	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BMF08_RS11185	COG3250	beta-galactosidase activity
BMF08_RS11230	COG3115	cell septum assembly
BMF08_RS11240	COG3530	Putative quorum-sensing-regulated virulence factor
BMF08_RS11245	COG0385	Bile acid
BMF08_RS11255	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BMF08_RS11260	COG2211	Major facilitator Superfamily
BMF08_RS11265	COG0583	DNA-binding transcription factor activity
BMF08_RS11300	COG3415	Transposase
BMF08_RS11305	COG3415	Transposase
BMF08_RS11320	COG2200	EAL domain
BMF08_RS11320	COG2199	diguanylate cyclase activity
BMF08_RS11325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BMF08_RS11340	COG0667	Aldo Keto reductase
BMF08_RS11350	COG3279	Response regulator of the LytR AlgR family
BMF08_RS11355	COG3275	phosphorelay sensor kinase activity
BMF08_RS11360	COG0436	Aminotransferase
BMF08_RS11375	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS11385	COG3715	PTS system
BMF08_RS11390	COG3716	PTS system mannose fructose sorbose family IID component
BMF08_RS11395	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BMF08_RS11410	COG2116	formate transmembrane transporter activity
BMF08_RS11420	COG2067	long-chain fatty acid transport protein
BMF08_RS11430	COG3691	Protein conserved in bacteria
BMF08_RS11440	COG1250	3-hydroxyacyl-CoA dehydrogenase
BMF08_RS11440	COG1024	Enoyl-CoA hydratase
BMF08_RS11445	COG2062	phosphohistidine phosphatase, SixA
BMF08_RS11470	COG0730	response to heat
BMF08_RS11475	COG3101	peptidyl-lysine hydroxylation
BMF08_RS11490	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
BMF08_RS11500	COG0436	Aminotransferase
BMF08_RS11505	COG1475	DNA binding
BMF08_RS11510	COG3969	phosphoadenosine phosphosulfate
BMF08_RS11515	COG0583	DNA-binding transcription factor activity
BMF08_RS11520	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BMF08_RS11530	COG3634	alkyl hydroperoxide reductase activity
BMF08_RS11540	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BMF08_RS11545	COG2207	Transcriptional regulator
BMF08_RS11550	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS11550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS11550	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BMF08_RS11555	COG1363	Peptidase, m42
BMF08_RS11560	COG0006	proline dipeptidase activity
BMF08_RS11565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS11570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS11575	COG3069	C4-dicarboxylate transmembrane transporter activity
BMF08_RS11590	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BMF08_RS11605	COG0583	DNA-binding transcription factor activity
BMF08_RS11620	COG1686	Belongs to the peptidase S11 family
BMF08_RS11625	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BMF08_RS11630	COG0772	Belongs to the SEDS family
BMF08_RS11635	COG0768	penicillin binding
BMF08_RS11645	COG0799	negative regulation of ribosome biogenesis
BMF08_RS11665	COG1466	dna polymerase III delta subunit
BMF08_RS11680	COG2888	peptidyl-tyrosine sulfation
BMF08_RS11690	COG1126	abc transporter atp-binding protein
BMF08_RS11695	COG0765	amino acid transport
BMF08_RS11700	COG0765	amino acid transport
BMF08_RS11715	COG4535	Mg2 and Co2 transporter CorC
BMF08_RS11720	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BMF08_RS11725	COG1702	phosphate starvation-inducible protein PhoH
BMF08_RS11735	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BMF08_RS11775	COG0367	asparagine synthase
BMF08_RS11785	COG0647	UMP catabolic process
BMF08_RS11790	COG1846	Transcriptional regulator
BMF08_RS11790	COG1940	carbohydrate kinase activity
BMF08_RS11795	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMF08_RS11810	COG1263	PTS System
BMF08_RS11810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS11810	COG2190	(PTS) system
BMF08_RS11825	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BMF08_RS11830	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BMF08_RS11855	COG1191	sigma factor activity
BMF08_RS11860	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BMF08_RS11870	COG0791	NLP P60 protein
BMF08_RS11890	COG1684	flagellar biosynthetic protein fliR
BMF08_RS11895	COG1987	bacterial-type flagellum assembly
BMF08_RS11920	COG1677	Flagellar hook-basal body complex protein FliE
BMF08_RS11930	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BMF08_RS11950	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BMF08_RS12025	COG3951	Flagellar rod assembly protein muramidase FlgJ
BMF08_RS12025	COG1705	Flagellar rod assembly protein muramidase FlgJ
BMF08_RS12055	COG0604	alcohol dehydrogenase
BMF08_RS12060	COG0735	belongs to the Fur family
BMF08_RS12065	COG0716	FMN binding
BMF08_RS12075	COG0596	Alpha beta hydrolase
BMF08_RS12080	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
BMF08_RS12085	COG0033	Phosphoglucomutase
BMF08_RS12090	COG0531	amino acid
BMF08_RS12095	COG1982	Orn Lys Arg decarboxylase major
BMF08_RS12100	COG0745	RESPONSE REGULATOR receiver
BMF08_RS12105	COG2205	protein histidine kinase activity
BMF08_RS12115	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BMF08_RS12120	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BMF08_RS12135	COG3272	Protein of unknown function (DUF1722)
BMF08_RS12145	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BMF08_RS12150	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BMF08_RS12155	COG1984	allophanate hydrolase subunit 2
BMF08_RS12180	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BMF08_RS12185	COG1053	succinate dehydrogenase
BMF08_RS12195	COG0567	Dehydrogenase, E1 component
BMF08_RS12200	COG0508	dehydrogenase complex catalyzes the overall conversion of
BMF08_RS12210	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BMF08_RS12215	COG2188	Transcriptional regulator
BMF08_RS12220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS12220	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS12220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS12225	COG0383	alpha-mannosidase activity
BMF08_RS12230	COG1271	oxidase subunit
BMF08_RS12235	COG1294	oxidase, subunit
BMF08_RS12240	COG4890	Cyd operon protein YbgT
BMF08_RS12245	COG3790	cyd operon protein YbgE
BMF08_RS12250	COG0824	Thioesterase
BMF08_RS12255	COG0811	peptide transport
BMF08_RS12260	COG0848	biopolymer transport protein
BMF08_RS12265	COG3064	Membrane
BMF08_RS12275	COG2885	chlorophyll binding
BMF08_RS12280	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BMF08_RS12315	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BMF08_RS12320	COG3201	nicotinamide mononucleotide transporter
BMF08_RS12325	COG1230	cation diffusion facilitator family transporter
BMF08_RS12335	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BMF08_RS12340	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS12345	COG2169	Transcriptional regulator
BMF08_RS12345	COG1917	Cupin 2, conserved barrel domain protein
BMF08_RS12350	COG1486	melibiose metabolic process
BMF08_RS12355	COG3394	polysaccharide catabolic process
BMF08_RS12365	COG2017	converts alpha-aldose to the beta-anomer
BMF08_RS12375	COG1085	galactose-1-phosphate uridylyltransferase
BMF08_RS12380	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BMF08_RS12385	COG1119	ATPase activity
BMF08_RS12390	COG3585	molybdate ion transport
BMF08_RS12390	COG2005	Transcriptional regulator
BMF08_RS12400	COG0725	ABC transporter, periplasmic molybdate-binding protein
BMF08_RS12405	COG4149	molybdate abc transporter
BMF08_RS12415	COG0561	phosphatase activity
BMF08_RS12420	COG2706	6-phosphogluconolactonase activity
BMF08_RS12425	COG4677	pectinesterase activity
BMF08_RS12460	COG0556	nucleotide-excision repair
BMF08_RS12475	COG0626	cystathionine gamma-synthase activity
BMF08_RS12480	COG1757	Na H antiporter
BMF08_RS12510	COG0521	Mo-molybdopterin cofactor biosynthetic process
BMF08_RS12520	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BMF08_RS12530	COG0670	Belongs to the BI1 family
BMF08_RS12535	COG0392	lysyltransferase activity
BMF08_RS12540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMF08_RS12545	COG3568	Endonuclease Exonuclease Phosphatase
BMF08_RS12555	COG0842	Transport permease protein
BMF08_RS12560	COG0842	Transport permease protein
BMF08_RS12565	COG1131	(ABC) transporter
BMF08_RS12575	COG1309	transcriptional regulator
BMF08_RS12580	COG0513	Belongs to the DEAD box helicase family
BMF08_RS12585	COG2188	Transcriptional regulator
BMF08_RS12590	COG1263	PTS System
BMF08_RS12590	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS12595	COG1486	melibiose metabolic process
BMF08_RS12605	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BMF08_RS12615	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BMF08_RS12630	COG0668	transmembrane transport
BMF08_RS12635	COG1126	abc transporter atp-binding protein
BMF08_RS12640	COG0765	amino acid transport
BMF08_RS12645	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS12665	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BMF08_RS12670	COG2194	sulfuric ester hydrolase activity
BMF08_RS12680	COG1321	iron dependent repressor
BMF08_RS12685	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMF08_RS12690	COG1566	PFAM secretion protein HlyD family protein
BMF08_RS12695	COG2814	Major facilitator Superfamily
BMF08_RS12705	COG0667	Aldo Keto reductase
BMF08_RS12715	COG3851	Histidine kinase
BMF08_RS12720	COG2271	Major facilitator Superfamily
BMF08_RS12725	COG1840	ABC-type Fe3 transport system, periplasmic component
BMF08_RS12735	COG3842	ATPase activity
BMF08_RS12740	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS12745	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS12750	COG2188	Transcriptional regulator
BMF08_RS12755	COG1376	ErfK ybiS ycfS ynhG family protein
BMF08_RS12760	COG0488	(ABC) transporter
BMF08_RS12765	COG0366	Alpha amylase catalytic
BMF08_RS12770	COG1653	transport
BMF08_RS12775	COG1175	transmembrane transport
BMF08_RS12780	COG0395	ABC-type sugar transport system, permease component
BMF08_RS12785	COG1063	alcohol dehydrogenase
BMF08_RS12790	COG1082	Xylose isomerase domain protein TIM barrel
BMF08_RS12795	COG0673	inositol 2-dehydrogenase activity
BMF08_RS12800	COG1554	hydrolase, family 65, central catalytic
BMF08_RS12805	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMF08_RS12810	COG3842	ATPase activity
BMF08_RS12820	COG1609	Transcriptional regulator
BMF08_RS12835	COG2271	Major facilitator Superfamily
BMF08_RS12840	COG1609	Transcriptional regulator
BMF08_RS12850	COG0561	phosphatase activity
BMF08_RS12855	COG1882	Formate acetyltransferase
BMF08_RS12860	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BMF08_RS12865	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BMF08_RS12870	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BMF08_RS12885	COG0747	negative chemotaxis
BMF08_RS12910	COG2133	pyrroloquinoline quinone binding
BMF08_RS12925	COG1609	Transcriptional regulator
BMF08_RS12930	COG0625	glutathione transferase activity
BMF08_RS12935	COG1686	Belongs to the peptidase S11 family
BMF08_RS12940	COG1349	DNA-binding transcription factor activity
BMF08_RS12945	COG0671	phosphoesterase, PA-phosphatase related
BMF08_RS12950	COG2814	Major facilitator Superfamily
BMF08_RS12955	COG0738	Major facilitator superfamily
BMF08_RS13000	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BMF08_RS13005	COG3842	ATPase activity
BMF08_RS13010	COG1176	ABC-type spermidine putrescine transport system, permease component I
BMF08_RS13015	COG1177	transmembrane transport
BMF08_RS13030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS13035	COG4160	amino acid transport
BMF08_RS13040	COG4215	(ABC) transporter
BMF08_RS13045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS13050	COG1126	abc transporter atp-binding protein
BMF08_RS13060	COG0393	Putative heavy-metal-binding
BMF08_RS13065	COG3023	N-Acetylmuramoyl-L-alanine amidase
BMF08_RS13070	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BMF08_RS13075	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BMF08_RS13080	COG0028	Belongs to the TPP enzyme family
BMF08_RS13090	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BMF08_RS13095	COG1151	hydroxylamine reductase activity
BMF08_RS13100	COG2431	L-lysine efflux transmembrane transporter activity
BMF08_RS13105	COG3593	DNA synthesis involved in DNA repair
BMF08_RS13110	COG2990	Protein conserved in bacteria
BMF08_RS13115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BMF08_RS13125	COG1278	Cold shock
BMF08_RS13130	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BMF08_RS13135	COG0542	response to heat
BMF08_RS13140	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BMF08_RS13155	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BMF08_RS13160	COG4988	ABC transporter
BMF08_RS13165	COG0492	ferredoxin-NADP+ reductase activity
BMF08_RS13190	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BMF08_RS13200	COG0243	molybdopterin cofactor binding
BMF08_RS13205	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS13210	COG3302	dmso reductase anchor subunit
BMF08_RS13215	COG0477	Major facilitator Superfamily
BMF08_RS13225	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BMF08_RS13230	COG1882	Formate acetyltransferase
BMF08_RS13235	COG2116	formate transmembrane transporter activity
BMF08_RS13240	COG1944	ATP diphosphatase activity
BMF08_RS13245	COG2323	membrane
BMF08_RS13265	COG0539	negative regulation of cytoplasmic translation
BMF08_RS13270	COG0776	regulation of translation
BMF08_RS13275	COG2333	competence protein COMEC
BMF08_RS13275	COG0658	competence protein
BMF08_RS13290	COG3214	Protein conserved in bacteria
BMF08_RS13295	COG2835	tetraacyldisaccharide 4'-kinase activity
BMF08_RS13300	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BMF08_RS13305	COG3173	Aminoglycoside phosphotransferase
BMF08_RS13310	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BMF08_RS13315	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BMF08_RS13325	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BMF08_RS13335	COG2989	Protein conserved in bacteria
BMF08_RS13345	COG3108	Peptidase M15
BMF08_RS13350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMF08_RS13355	COG1448	Aminotransferase
BMF08_RS13365	COG0017	Asparaginyl-tRNA synthetase
BMF08_RS13375	COG0308	aminopeptidase N
BMF08_RS13385	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMF08_RS13395	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMF08_RS13400	COG0431	NADPH-dependent FMN reductase
BMF08_RS13415	COG0633	Ferredoxin
BMF08_RS13415	COG3217	Mosc domain protein beta barrel domain protein
BMF08_RS13425	COG0488	(ABC) transporter
BMF08_RS13430	COG2995	paraquat-inducible protein a
BMF08_RS13435	COG3008	intermembrane lipid transfer
BMF08_RS13435	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BMF08_RS13440	COG3009	Protein conserved in bacteria
BMF08_RS13445	COG3130	regulation of translation
BMF08_RS13455	COG1067	ATP-dependent peptidase activity
BMF08_RS13480	COG3070	regulator of competence-specific genes
BMF08_RS13485	COG1289	transmembrane transporter activity
BMF08_RS13490	COG3304	Inner membrane component domain
BMF08_RS13495	COG0210	DNA helicase
BMF08_RS13505	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BMF08_RS13510	COG1832	CoA-binding protein
BMF08_RS13520	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BMF08_RS13535	COG2920	part of a sulfur-relay system
BMF08_RS13540	COG0670	Belongs to the BI1 family
BMF08_RS13580	COG3729	General stress protein
BMF08_RS13585	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BMF08_RS13615	COG1309	transcriptional regulator
BMF08_RS13630	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMF08_RS13640	COG2822	iron ion transport
BMF08_RS13650	COG1702	phosphate starvation-inducible protein PhoH
BMF08_RS13680	COG3381	protein complex oligomerization
BMF08_RS13730	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BMF08_RS13735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMF08_RS13755	COG5645	(Lipo)protein
BMF08_RS13770	COG1560	Kdo2-lipid A biosynthetic process
BMF08_RS13780	COG2353	YceI-like domain
BMF08_RS13785	COG3038	cytochrome b561
BMF08_RS13815	COG0418	dihydroorotase activity
BMF08_RS13825	COG2999	glutathione oxidoreductase activity
BMF08_RS13835	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMF08_RS13870	COG1558	bacterial-type flagellum-dependent cell motility
BMF08_RS13880	COG1749	Flagellar hook protein flgE
BMF08_RS13890	COG4786	Flagellar basal body rod
BMF08_RS13910	COG1256	bacterial-type flagellum assembly
BMF08_RS13920	COG2814	Major facilitator Superfamily
BMF08_RS13925	COG0583	DNA-binding transcription factor activity
BMF08_RS13930	COG1530	ribonuclease E activity
BMF08_RS13940	COG0564	pseudouridine synthase activity
BMF08_RS13955	COG1399	metal-binding, possibly nucleic acid-binding protein
BMF08_RS13980	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS13990	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BMF08_RS13995	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BMF08_RS14000	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BMF08_RS14010	COG0470	DNA polymerase III
BMF08_RS14015	COG0084	hydrolase, TatD family'
BMF08_RS14020	COG1263	PTS System
BMF08_RS14020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS14025	COG4773	Receptor
BMF08_RS14030	COG0537	adenosine 5'-monophosphoramidase activity
BMF08_RS14035	COG5633	Lipoprotein
BMF08_RS14060	COG1252	NADH dehydrogenase
BMF08_RS14065	COG3134	Outer membrane lipoprotein
BMF08_RS14075	COG1309	transcriptional regulator
BMF08_RS14080	COG1376	ErfK ybiS ycfS ynhG family protein
BMF08_RS14080	COG1388	LysM domain
BMF08_RS14085	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BMF08_RS14090	COG4763	Acyl-transferase
BMF08_RS14095	COG4591	ABC-type transport system involved in lipoprotein release permease component
BMF08_RS14100	COG1136	(ABC) transporter
BMF08_RS14105	COG4591	ABC-type transport system involved in lipoprotein release permease component
BMF08_RS14150	COG1943	Transposase
BMF08_RS14155	COG2850	peptidyl-arginine hydroxylation
BMF08_RS14160	COG2205	protein histidine kinase activity
BMF08_RS14165	COG0745	RESPONSE REGULATOR receiver
BMF08_RS14170	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BMF08_RS14175	COG2915	High frequency lysogenization protein hflD homolog
BMF08_RS14190	COG1187	pseudouridine synthase activity
BMF08_RS14195	COG0538	isocitrate dehydrogenase activity
BMF08_RS14200	COG0071	Belongs to the small heat shock protein (HSP20) family
BMF08_RS14210	COG2135	peptidase activity
BMF08_RS14225	COG0840	transmembrane signaling receptor activity
BMF08_RS14230	COG5001	Diguanylate cyclase
BMF08_RS14240	COG0504	CTP synthase activity
BMF08_RS14245	COG2807	transmembrane transport
BMF08_RS14250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS14260	COG0765	amino acid transport
BMF08_RS14265	COG0765	amino acid transport
BMF08_RS14280	COG2211	Major facilitator Superfamily
BMF08_RS14290	COG2718	Belongs to the UPF0229 family
BMF08_RS14295	COG2766	serine protein kinase
BMF08_RS14300	COG3713	MltA-interacting MipA family protein
BMF08_RS14305	COG0656	L-ascorbic acid biosynthetic process
BMF08_RS14325	COG3139	Protein of unknown function (DUF1315)
BMF08_RS14335	COG1335	isochorismatase
BMF08_RS14340	COG0252	asparaginase activity
BMF08_RS14345	COG0616	signal peptide processing
BMF08_RS14350	COG0778	Nitroreductase
BMF08_RS14355	COG0583	DNA-binding transcription factor activity
BMF08_RS14360	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BMF08_RS14365	COG0709	Synthesizes selenophosphate from selenide and ATP
BMF08_RS14385	COG0708	Exodeoxyribonuclease III
BMF08_RS14415	COG3678	ATP-independent chaperone mediated protein folding
BMF08_RS14425	COG0322	excinuclease ABC activity
BMF08_RS14430	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BMF08_RS14435	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BMF08_RS14440	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS14445	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS14450	COG1447	Phosphotransferase system cellobiose-specific component IIA
BMF08_RS14455	COG2169	Transcriptional regulator
BMF08_RS14455	COG1917	Cupin 2, conserved barrel domain protein
BMF08_RS14460	COG1486	melibiose metabolic process
BMF08_RS14465	COG3394	polysaccharide catabolic process
BMF08_RS14470	COG0753	catalase activity
BMF08_RS14480	COG1823	symporter activity
BMF08_RS14485	COG1988	membrane-bound metal-dependent
BMF08_RS14490	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS14495	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMF08_RS14505	COG3001	Fructosamine kinase
BMF08_RS14515	COG1105	Belongs to the carbohydrate kinase PfkB family
BMF08_RS14520	COG3137	Salt-induced outer membrane protein
BMF08_RS14575	COG0776	regulation of translation
BMF08_RS14580	COG4139	cobalamin transport
BMF08_RS14585	COG0386	Belongs to the glutathione peroxidase family
BMF08_RS14595	COG0791	NLP P60 protein
BMF08_RS14605	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BMF08_RS14610	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BMF08_RS14615	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BMF08_RS14620	COG0574	Belongs to the PEP-utilizing enzyme family
BMF08_RS14620	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BMF08_RS14630	COG0628	permease
BMF08_RS14635	COG0247	lactate metabolic process
BMF08_RS14635	COG0277	FAD linked oxidase domain protein
BMF08_RS14640	COG2050	protein possibly involved in aromatic compounds catabolism
BMF08_RS14645	COG1560	Kdo2-lipid A biosynthetic process
BMF08_RS14650	COG0316	Belongs to the HesB IscA family
BMF08_RS14655	COG0719	Fe-S assembly protein
BMF08_RS14660	COG0396	ATPase activity
BMF08_RS14665	COG0719	Fe-S assembly protein
BMF08_RS14675	COG2166	iron-sulfur cluster assembly
BMF08_RS14680	COG1376	ErfK ybiS ycfS ynhG family protein
BMF08_RS14700	COG2223	nitrite transmembrane transporter activity
BMF08_RS14705	COG0483	inositol monophosphate 1-phosphatase activity
BMF08_RS14725	COG0534	Mate efflux family protein
BMF08_RS14730	COG0307	riboflavin synthase, alpha
BMF08_RS14735	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BMF08_RS14740	COG2814	Major facilitator Superfamily
BMF08_RS14745	COG0583	DNA-binding transcription factor activity
BMF08_RS14760	COG2814	Major facilitator Superfamily
BMF08_RS14765	COG0791	NLP P60 protein
BMF08_RS14770	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BMF08_RS14780	COG0346	lactoylglutathione lyase activity
BMF08_RS14785	COG1902	pentaerythritol trinitrate reductase activity
BMF08_RS14790	COG1309	transcriptional regulator
BMF08_RS14795	COG3313	Fe-S protein
BMF08_RS14800	COG4989	oxidoreductase activity
BMF08_RS14805	COG2032	superoxide dismutase activity
BMF08_RS14815	COG1566	PFAM secretion protein HlyD family protein
BMF08_RS14840	COG3895	Periplasmic Protein
BMF08_RS14855	COG0625	glutathione transferase activity
BMF08_RS14870	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BMF08_RS14880	COG4659	FMN binding
BMF08_RS14910	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS14920	COG0673	inositol 2-dehydrogenase activity
BMF08_RS14930	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BMF08_RS14935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS14935	COG1263	PTS System
BMF08_RS14940	COG1609	Transcriptional regulator
BMF08_RS14945	COG5339	Protein conserved in bacteria
BMF08_RS14960	COG0114	fumarate hydratase activity
BMF08_RS14970	COG2205	protein histidine kinase activity
BMF08_RS14975	COG0745	RESPONSE REGULATOR receiver
BMF08_RS14980	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS14985	COG0531	amino acid
BMF08_RS15000	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BMF08_RS15005	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BMF08_RS15025	COG2840	Smr protein MutS2
BMF08_RS15030	COG0024	Methionine aminopeptidase
BMF08_RS15040	COG3813	Protein conserved in bacteria
BMF08_RS15045	COG3387	PFAM Glycoside hydrolase 15-related
BMF08_RS15050	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS15080	COG5001	Diguanylate cyclase
BMF08_RS15085	COG3591	Belongs to the peptidase S1B family
BMF08_RS15095	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BMF08_RS15100	COG2814	Major facilitator Superfamily
BMF08_RS15105	COG0583	DNA-binding transcription factor activity
BMF08_RS15110	COG1940	carbohydrate kinase activity
BMF08_RS15115	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BMF08_RS15145	COG3302	dmso reductase anchor subunit
BMF08_RS15150	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS15155	COG0243	molybdopterin cofactor binding
BMF08_RS15170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMF08_RS15200	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS15210	COG1063	alcohol dehydrogenase
BMF08_RS15215	COG0477	Major facilitator Superfamily
BMF08_RS15220	COG0246	Mannitol dehydrogenase
BMF08_RS15225	COG1802	Transcriptional regulator
BMF08_RS15235	COG3729	General stress protein
BMF08_RS15260	COG2070	2-Nitropropane dioxygenase
BMF08_RS15275	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BMF08_RS15285	COG0583	DNA-binding transcription factor activity
BMF08_RS15300	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS15305	COG0583	DNA-binding transcription factor activity
BMF08_RS15320	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BMF08_RS15325	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS15335	COG0386	Belongs to the glutathione peroxidase family
BMF08_RS15380	COG1309	transcriptional regulator
BMF08_RS15385	COG4221	oxidoreductase activity
BMF08_RS15390	COG0339	signal peptide processing
BMF08_RS15405	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS15410	COG1733	regulation of RNA biosynthetic process
BMF08_RS15415	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BMF08_RS15420	COG2814	Major facilitator Superfamily
BMF08_RS15425	COG0697	spore germination
BMF08_RS15440	COG1846	Transcriptional regulator
BMF08_RS15450	COG2814	Major facilitator Superfamily
BMF08_RS15460	COG0039	L-malate dehydrogenase activity
BMF08_RS15465	COG0583	DNA-binding transcription factor activity
BMF08_RS15470	COG1012	belongs to the aldehyde dehydrogenase family
BMF08_RS15475	COG0840	transmembrane signaling receptor activity
BMF08_RS15500	COG2199	diguanylate cyclase activity
BMF08_RS15505	COG5002	protein histidine kinase activity
BMF08_RS15505	COG3447	MASE1 domain protein
BMF08_RS15505	COG5001	Diguanylate cyclase
BMF08_RS15510	COG3706	GGDEF domain
BMF08_RS15525	COG0840	transmembrane signaling receptor activity
BMF08_RS15530	COG3706	GGDEF domain
BMF08_RS15530	COG2203	Gaf domain
BMF08_RS15530	COG5001	Diguanylate cyclase
BMF08_RS15530	COG4251	negative regulation of phosphorylation
BMF08_RS15540	COG4628	conserved protein (DUF2132)
BMF08_RS15545	COG1278	Cold shock
BMF08_RS15550	COG4993	Dehydrogenase
BMF08_RS15570	COG3550	peptidyl-serine autophosphorylation
BMF08_RS15575	COG1309	transcriptional regulator
BMF08_RS15580	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS15610	COG0840	transmembrane signaling receptor activity
BMF08_RS15615	COG5001	Diguanylate cyclase
BMF08_RS15615	COG3300	MHYT domain
BMF08_RS15660	COG2211	Major facilitator Superfamily
BMF08_RS15665	COG1609	Transcriptional regulator
BMF08_RS15670	COG1649	PFAM Uncharacterised BCR, COG1649
BMF08_RS15675	COG0789	Transcriptional regulator
BMF08_RS15680	COG2200	EAL domain
BMF08_RS15700	COG1609	Transcriptional regulator
BMF08_RS15705	COG0840	transmembrane signaling receptor activity
BMF08_RS15715	COG0488	(ABC) transporter
BMF08_RS15755	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BMF08_RS15760	COG1178	ABC-type Fe3 transport system permease component
BMF08_RS15765	COG1840	ABC-type Fe3 transport system, periplasmic component
BMF08_RS15770	COG3842	ATPase activity
BMF08_RS15775	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BMF08_RS15780	COG1942	4-Oxalocrotonate Tautomerase
BMF08_RS15785	COG0563	adenylate kinase activity
BMF08_RS15790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS15795	COG1126	abc transporter atp-binding protein
BMF08_RS15810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS15815	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMF08_RS15820	COG1473	amidohydrolase
BMF08_RS15825	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BMF08_RS15840	COG4772	TonB-dependent receptor
BMF08_RS15845	COG1802	Transcriptional regulator
BMF08_RS15850	COG2130	NADP-dependent
BMF08_RS15860	COG1247	-acetyltransferase
BMF08_RS15865	COG3238	Protein conserved in bacteria
BMF08_RS15875	COG0747	negative chemotaxis
BMF08_RS15910	COG4677	pectinesterase activity
BMF08_RS15930	COG1012	belongs to the aldehyde dehydrogenase family
BMF08_RS15935	COG1177	transmembrane transport
BMF08_RS15940	COG1176	ABC-type spermidine putrescine transport system, permease component I
BMF08_RS15945	COG3842	ATPase activity
BMF08_RS15950	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BMF08_RS15955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BMF08_RS15960	COG1271	oxidase subunit
BMF08_RS15965	COG1294	oxidase, subunit
BMF08_RS15975	COG0826	peptidase U32
BMF08_RS15980	COG1396	sequence-specific DNA binding
BMF08_RS15985	COG3135	benzoate transporter
BMF08_RS16005	COG0500	methyltransferase
BMF08_RS16010	COG1275	C4-dicarboxylate transporter malic acid transport protein
BMF08_RS16015	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BMF08_RS16020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMF08_RS16025	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BMF08_RS16050	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BMF08_RS16060	COG0436	Aminotransferase
BMF08_RS16070	COG1051	belongs to the nudix hydrolase family
BMF08_RS16075	COG2272	Belongs to the type-B carboxylesterase lipase family
BMF08_RS16080	COG5383	Protein conserved in bacteria
BMF08_RS16085	COG0583	DNA-binding transcription factor activity
BMF08_RS16095	COG4993	Dehydrogenase
BMF08_RS16100	COG0840	transmembrane signaling receptor activity
BMF08_RS16120	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BMF08_RS16125	COG0640	Transcriptional regulator
BMF08_RS16140	COG0477	Major facilitator Superfamily
BMF08_RS16145	COG3038	cytochrome b561
BMF08_RS16155	COG1012	belongs to the aldehyde dehydrogenase family
BMF08_RS16160	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BMF08_RS16180	COG1643	Atp-dependent helicase
BMF08_RS16190	COG0667	Aldo Keto reductase
BMF08_RS16200	COG2911	Protein conserved in bacteria
BMF08_RS16205	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMF08_RS16210	COG3187	Heat shock protein
BMF08_RS16215	COG3042	response to heat
BMF08_RS16220	COG3443	Belongs to the bacterial solute-binding protein 9 family
BMF08_RS16225	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BMF08_RS16225	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BMF08_RS16225	COG1013	pyruvate-flavodoxin oxidoreductase activity
BMF08_RS16225	COG0674	pyruvate-flavodoxin oxidoreductase activity
BMF08_RS16235	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BMF08_RS16240	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMF08_RS16250	COG0513	Belongs to the DEAD box helicase family
BMF08_RS16260	COG0840	transmembrane signaling receptor activity
BMF08_RS16270	COG4166	transmembrane transport
BMF08_RS16275	COG2866	Carboxypeptidase
BMF08_RS16280	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS16285	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BMF08_RS16295	COG0583	DNA-binding transcription factor activity
BMF08_RS16310	COG3106	COG3106 Predicted ATPase
BMF08_RS16320	COG1983	PspC domain protein
BMF08_RS16330	COG1842	Phage shock protein A
BMF08_RS16335	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BMF08_RS16340	COG1403	HNH endonuclease
BMF08_RS16350	COG2814	Major facilitator Superfamily
BMF08_RS16370	COG4172	Belongs to the ABC transporter superfamily
BMF08_RS16385	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BMF08_RS16385	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BMF08_RS16395	COG5001	Diguanylate cyclase
BMF08_RS16400	COG1024	Enoyl-CoA hydratase
BMF08_RS16410	COG1349	DNA-binding transcription factor activity
BMF08_RS16420	COG0023	Translation Initiation Factor
BMF08_RS16425	COG0284	orotidine-5'-phosphate decarboxylase activity
BMF08_RS16430	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BMF08_RS16435	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BMF08_RS16440	COG0671	phosphoesterase, PA-phosphatase related
BMF08_RS16475	COG0616	signal peptide processing
BMF08_RS16480	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS16485	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BMF08_RS16490	COG1187	pseudouridine synthase activity
BMF08_RS16500	COG0009	L-threonylcarbamoyladenylate synthase
BMF08_RS16505	COG0613	PHP domain protein
BMF08_RS16510	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BMF08_RS16515	COG0512	Glutamine amidotransferase of anthranilate synthase
BMF08_RS16515	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BMF08_RS16535	COG3047	cAMP biosynthetic process
BMF08_RS16560	COG2350	Protein conserved in bacteria
BMF08_RS16570	COG3099	Belongs to the UPF0263 family
BMF08_RS16580	COG0444	Belongs to the ABC transporter superfamily
BMF08_RS16585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMF08_RS16595	COG4166	transmembrane transport
BMF08_RS16600	COG2095	MarC family integral membrane protein
BMF08_RS16605	COG1454	alcohol dehydrogenase
BMF08_RS16605	COG1012	belongs to the aldehyde dehydrogenase family
BMF08_RS16610	COG1435	thymidine kinase activity
BMF08_RS16615	COG2916	Histone family protein nucleoid-structuring protein H-NS
BMF08_RS16620	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BMF08_RS16625	COG0745	RESPONSE REGULATOR receiver
BMF08_RS16635	COG0788	formyltetrahydrofolate deformylase activity
BMF08_RS16650	COG2181	nitrate reductase activity
BMF08_RS16655	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BMF08_RS16660	COG1140	nitrate reductase beta subunit
BMF08_RS16665	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BMF08_RS16670	COG2223	nitrite transmembrane transporter activity
BMF08_RS16675	COG3850	Histidine kinase
BMF08_RS16680	COG2197	response regulator
BMF08_RS16685	COG4932	domain protein
BMF08_RS16695	COG0243	molybdopterin cofactor binding
BMF08_RS16700	COG2146	nitrite reductase [NAD(P)H] activity
BMF08_RS16700	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BMF08_RS16705	COG1116	anion transmembrane transporter activity
BMF08_RS16710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BMF08_RS16715	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BMF08_RS16725	COG3707	response regulator
BMF08_RS16730	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BMF08_RS16740	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BMF08_RS16745	COG4572	Cation transport regulator
BMF08_RS16750	COG0387	Pfam Sodium calcium exchanger
BMF08_RS16770	COG2890	protein-(glutamine-N5) methyltransferase activity
BMF08_RS16775	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BMF08_RS16805	COG0659	secondary active sulfate transmembrane transporter activity
BMF08_RS16815	COG0193	aminoacyl-tRNA hydrolase activity
BMF08_RS16820	COG0012	GTP binding
BMF08_RS16825	COG4139	cobalamin transport
BMF08_RS16840	COG1120	ATPase activity
BMF08_RS16860	COG0840	transmembrane signaling receptor activity
BMF08_RS16865	COG3615	Tellurite resistance protein tehB
BMF08_RS16875	COG3615	Tellurite resistance protein tehB
BMF08_RS16890	COG4977	sequence-specific DNA binding
BMF08_RS16895	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BMF08_RS16905	COG3284	Transcriptional regulator
BMF08_RS16915	COG1215	transferase activity, transferring glycosyl groups
BMF08_RS16920	COG0726	polysaccharide deacetylase
BMF08_RS16920	COG1649	PFAM Uncharacterised BCR, COG1649
BMF08_RS16925	COG0457	Tetratricopeptide repeat
BMF08_RS16940	COG0840	transmembrane signaling receptor activity
BMF08_RS16945	COG0439	Biotin carboxylase
BMF08_RS16950	COG3665	Urea carboxylase-associated protein
BMF08_RS16960	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BMF08_RS16995	COG4774	siderophore transport
BMF08_RS17015	COG0741	lytic transglycosylase activity
BMF08_RS17025	COG1619	proteins homologs of microcin C7 resistance protein MccF
BMF08_RS17030	COG3263	regulation of cellular component size
BMF08_RS17035	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BMF08_RS17045	COG2719	SpoVR family
BMF08_RS17050	COG2186	Transcriptional regulator
BMF08_RS17060	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BMF08_RS17080	COG0179	Fumarylacetoacetate (FAA) hydrolase
BMF08_RS17095	COG2894	cell division
BMF08_RS17105	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BMF08_RS17110	COG0318	PFAM AMP-dependent synthetase and ligase
BMF08_RS17120	COG3065	identical protein binding
BMF08_RS17130	COG1199	ATP-dependent helicase activity
BMF08_RS17135	COG0251	oxidation-reduction process
BMF08_RS17155	COG1760	l-serine dehydratase
BMF08_RS17160	COG2200	EAL domain
BMF08_RS17165	COG1253	flavin adenine dinucleotide binding
BMF08_RS17175	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS17175	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS17180	COG3715	PTS system
BMF08_RS17185	COG3716	PTS system mannose fructose sorbose family IID component
BMF08_RS17190	COG4811	Protein of unknown function (DUF986)
BMF08_RS17205	COG2226	methyltransferase
BMF08_RS17210	COG0768	penicillin binding
BMF08_RS17245	COG1414	Transcriptional regulator
BMF08_RS17250	COG0501	Belongs to the peptidase M48B family
BMF08_RS17265	COG1956	GAF domain-containing protein
BMF08_RS17270	COG2995	paraquat-inducible protein a
BMF08_RS17275	COG3008	intermembrane lipid transfer
BMF08_RS17280	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BMF08_RS17280	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
BMF08_RS17295	COG2990	Protein conserved in bacteria
BMF08_RS17305	COG3706	GGDEF domain
BMF08_RS17315	COG1276	copper resistance
BMF08_RS17320	COG2372	response to copper ion
BMF08_RS17330	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BMF08_RS17335	COG1770	oligopeptidase
BMF08_RS17340	COG2979	Protein of unknown function (DUF533)
BMF08_RS17350	COG3141	response to X-ray
BMF08_RS17355	COG1064	alcohol dehydrogenase
BMF08_RS17375	COG0800	Aldolase
BMF08_RS17380	COG0129	dihydroxy-acid dehydratase activity
BMF08_RS17385	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMF08_RS17390	COG1737	Transcriptional regulator
BMF08_RS17400	COG1560	Kdo2-lipid A biosynthetic process
BMF08_RS17405	COG0739	heme binding
BMF08_RS17410	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BMF08_RS17420	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BMF08_RS17425	COG2255	four-way junction helicase activity
BMF08_RS17430	COG0632	four-way junction helicase activity
BMF08_RS17445	COG0494	nUDIX hydrolase
BMF08_RS17455	COG1335	isochorismatase
BMF08_RS17610	COG3179	chitinase
BMF08_RS17630	COG0484	heat shock protein binding
BMF08_RS17635	COG1403	HNH endonuclease
BMF08_RS17650	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMF08_RS17655	COG4725	Belongs to the MT-A70-like family
BMF08_RS17675	COG4197	protein conserved in bacteria, prophage-related
BMF08_RS17680	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMF08_RS17685	COG2974	May be involved in recombination
BMF08_RS17690	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BMF08_RS17725	COG0582	viral genome integration into host DNA
BMF08_RS17730	COG1801	Protein of unknown function DUF72
BMF08_RS17735	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BMF08_RS17750	COG3142	Participates in the control of copper homeostasis
BMF08_RS17755	COG3102	Protein conserved in bacteria
BMF08_RS17765	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BMF08_RS17770	COG2211	Major facilitator Superfamily
BMF08_RS17785	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BMF08_RS17795	COG0745	RESPONSE REGULATOR receiver
BMF08_RS17810	COG0840	transmembrane signaling receptor activity
BMF08_RS17885	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS17890	COG1129	ABC transporter
BMF08_RS17895	COG1879	ABC-type sugar transport system periplasmic component
BMF08_RS17910	COG1528	Iron-storage protein
BMF08_RS17915	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BMF08_RS17945	COG1528	Iron-storage protein
BMF08_RS17950	COG0814	amino acid
BMF08_RS17955	COG3012	SEC-C Motif Domain Protein
BMF08_RS17955	COG3318	Belongs to the UPF0149 family
BMF08_RS17995	COG2197	response regulator
BMF08_RS18005	COG2197	response regulator
BMF08_RS18010	COG1126	abc transporter atp-binding protein
BMF08_RS18015	COG0765	amino acid transport
BMF08_RS18025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BMF08_RS18065	COG0438	transferase activity, transferring glycosyl groups
BMF08_RS18065	COG1216	Glycosyl transferase, family 2
BMF08_RS18095	COG0366	Alpha amylase catalytic
BMF08_RS18105	COG2391	methyltransferase activity
BMF08_RS18110	COG0425	Belongs to the sulfur carrier protein TusA family
BMF08_RS18125	COG1677	Flagellar hook-basal body complex protein FliE
BMF08_RS18140	COG1317	bacterial-type flagellum organization
BMF08_RS18160	COG1580	Controls the rotational direction of flagella during chemotaxis
BMF08_RS18170	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BMF08_RS18195	COG2197	response regulator
BMF08_RS18220	COG2354	Protein conserved in bacteria
BMF08_RS18225	COG0697	spore germination
BMF08_RS18230	COG3727	T/G mismatch-specific endonuclease activity
BMF08_RS18235	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BMF08_RS18245	COG3228	Belongs to the MtfA family
BMF08_RS18275	COG5434	Belongs to the glycosyl hydrolase 28 family
BMF08_RS18280	COG2382	esterase
BMF08_RS18290	COG3157	Type VI secretion system effector, Hcp
BMF08_RS18360	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BMF08_RS18370	COG0534	Mate efflux family protein
BMF08_RS18385	COG1349	DNA-binding transcription factor activity
BMF08_RS18390	COG0494	nUDIX hydrolase
BMF08_RS18400	COG2207	Transcriptional regulator
BMF08_RS18425	COG0477	Major facilitator Superfamily
BMF08_RS18450	COG0583	DNA-binding transcription factor activity
BMF08_RS18455	COG4221	oxidoreductase activity
BMF08_RS18475	COG2814	Major facilitator Superfamily
BMF08_RS18485	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BMF08_RS18515	COG2351	hydroxyisourate hydrolase activity
BMF08_RS18520	COG0745	RESPONSE REGULATOR receiver
BMF08_RS18525	COG2205	protein histidine kinase activity
BMF08_RS18560	COG3479	Phenolic acid decarboxylase
BMF08_RS18570	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS18585	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BMF08_RS18595	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BMF08_RS18600	COG0640	Transcriptional regulator
BMF08_RS18645	COG1289	transmembrane transporter activity
BMF08_RS18660	COG2925	Exonuclease
BMF08_RS18665	COG0531	amino acid
BMF08_RS18670	COG0583	DNA-binding transcription factor activity
BMF08_RS18675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BMF08_RS18685	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BMF08_RS18705	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BMF08_RS18715	COG0107	imidazoleglycerol-phosphate synthase activity
BMF08_RS18740	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BMF08_RS18750	COG1216	Glycosyl transferase, family 2
BMF08_RS18750	COG0463	Glycosyl transferase, family 2
BMF08_RS18755	COG0438	transferase activity, transferring glycosyl groups
BMF08_RS18785	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BMF08_RS18820	COG0438	transferase activity, transferring glycosyl groups
BMF08_RS18825	COG2327	Polysaccharide pyruvyl transferase
BMF08_RS18830	COG2244	polysaccharide biosynthetic process
BMF08_RS18835	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BMF08_RS18840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BMF08_RS18850	COG0297	glycogen (starch) synthase activity
BMF08_RS18855	COG1051	belongs to the nudix hydrolase family
BMF08_RS18860	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BMF08_RS18865	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BMF08_RS18870	COG0110	maltose O-acetyltransferase activity
BMF08_RS18875	COG1216	Glycosyl transferase, family 2
BMF08_RS18885	COG0438	transferase activity, transferring glycosyl groups
BMF08_RS18890	COG1045	serine acetyltransferase
BMF08_RS18895	COG0463	Glycosyl transferase, family 2
BMF08_RS18915	COG1253	flavin adenine dinucleotide binding
BMF08_RS18920	COG2982	Protein involved in outer membrane biogenesis
BMF08_RS18930	COG0572	uridine kinase
BMF08_RS18935	COG5001	Diguanylate cyclase
BMF08_RS18935	COG3447	MASE1 domain protein
BMF08_RS18935	COG5002	protein histidine kinase activity
BMF08_RS18940	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BMF08_RS18945	COG0443	Heat shock 70 kDa protein
BMF08_RS18965	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS18980	COG2205	protein histidine kinase activity
BMF08_RS18985	COG0745	RESPONSE REGULATOR receiver
BMF08_RS18990	COG0826	peptidase U32
BMF08_RS19000	COG4608	Belongs to the ABC transporter superfamily
BMF08_RS19005	COG0444	Belongs to the ABC transporter superfamily
BMF08_RS19010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMF08_RS19015	COG0601	transmembrane transport
BMF08_RS19020	COG0747	negative chemotaxis
BMF08_RS19025	COG4948	Mandelate Racemase Muconate Lactonizing
BMF08_RS19030	COG1830	Aldolase
BMF08_RS19035	COG2211	Major facilitator Superfamily
BMF08_RS19040	COG1397	ADP-ribosylglycohydrolase
BMF08_RS19045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMF08_RS19050	COG2188	Transcriptional regulator
BMF08_RS19055	COG0351	phosphomethylpyrimidine kinase
BMF08_RS19080	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BMF08_RS19105	COG5455	response to cobalt ion
BMF08_RS19110	COG0456	acetyltransferase
BMF08_RS19115	COG0489	protein tyrosine kinase activity
BMF08_RS19125	COG4808	Protein conserved in bacteria
BMF08_RS19130	COG4807	Protein conserved in bacteria
BMF08_RS19140	COG3275	phosphorelay sensor kinase activity
BMF08_RS19145	COG0789	Transcriptional regulator
BMF08_RS19155	COG1174	glycine betaine transport
BMF08_RS19160	COG1125	glycine betaine transport
BMF08_RS19165	COG1174	glycine betaine transport
BMF08_RS19170	COG1732	Glycine betaine
BMF08_RS19175	COG2814	Major facilitator Superfamily
BMF08_RS19185	COG1472	Belongs to the glycosyl hydrolase 3 family
BMF08_RS19190	COG0277	FAD linked oxidase domain protein
BMF08_RS19200	COG1686	Belongs to the peptidase S11 family
BMF08_RS19210	COG0586	Pfam SNARE associated Golgi protein
BMF08_RS19215	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS19225	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BMF08_RS19235	COG1346	cytolysis
BMF08_RS19240	COG0295	cytidine deaminase activity
BMF08_RS19245	COG2949	membrane
BMF08_RS19250	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BMF08_RS19260	COG2323	membrane
BMF08_RS19275	COG1129	ABC transporter
BMF08_RS19280	COG1879	ABC-type sugar transport system periplasmic component
BMF08_RS19295	COG2311	Membrane
BMF08_RS19300	COG0302	gtp cyclohydrolase
BMF08_RS19305	COG0477	Major facilitator Superfamily
BMF08_RS19315	COG4771	TonB-dependent receptor
BMF08_RS19320	COG0833	amino acid
BMF08_RS19330	COG0583	DNA-binding transcription factor activity
BMF08_RS19355	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS19355	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BMF08_RS19355	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BMF08_RS19360	COG1105	Belongs to the carbohydrate kinase PfkB family
BMF08_RS19365	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS19365	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS19390	COG0246	Mannitol dehydrogenase
BMF08_RS19395	COG0523	cobalamin synthesis protein
BMF08_RS19400	COG0671	phosphoesterase, PA-phosphatase related
BMF08_RS19405	COG0791	NLP P60 protein
BMF08_RS19410	COG2200	EAL domain
BMF08_RS19415	COG4166	transmembrane transport
BMF08_RS19420	COG4174	ABC transporter (Permease)
BMF08_RS19425	COG4239	(ABC) transporter, permease
BMF08_RS19430	COG4172	Belongs to the ABC transporter superfamily
BMF08_RS19440	COG2814	Major facilitator Superfamily
BMF08_RS19445	COG1187	pseudouridine synthase activity
BMF08_RS19450	COG1061	Type III restriction enzyme res subunit
BMF08_RS19465	COG3082	Protein of unknown function (DUF1414)
BMF08_RS19480	COG0659	secondary active sulfate transmembrane transporter activity
BMF08_RS19485	COG2239	Acts as a magnesium transporter
BMF08_RS19490	COG4615	Cyclic peptide transporter
BMF08_RS19495	COG3145	DNA-N1-methyladenine dioxygenase activity
BMF08_RS19500	COG2169	Transcriptional regulator
BMF08_RS19500	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BMF08_RS19505	COG1477	protein flavinylation
BMF08_RS19515	COG0642	Histidine kinase
BMF08_RS19515	COG2198	Histidine kinase
BMF08_RS19520	COG2197	response regulator
BMF08_RS19525	COG2205	protein histidine kinase activity
BMF08_RS19525	COG0784	Response regulator, receiver
BMF08_RS19535	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BMF08_RS19545	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMF08_RS19555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BMF08_RS19565	COG2271	Major facilitator Superfamily
BMF08_RS19570	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BMF08_RS19575	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
BMF08_RS19580	COG0247	lactate metabolic process
BMF08_RS19625	COG1169	isochorismate synthase
BMF08_RS19640	COG4575	ribosome binding
BMF08_RS19645	COG2153	protein acetylation
BMF08_RS19655	COG0784	Response regulator, receiver
BMF08_RS19655	COG0835	chemotaxis
BMF08_RS19665	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BMF08_RS19670	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BMF08_RS19675	COG0713	ATP synthesis coupled electron transport
BMF08_RS19680	COG0839	Belongs to the complex I subunit 6 family
BMF08_RS19690	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BMF08_RS19730	COG0583	DNA-binding transcription factor activity
BMF08_RS19735	COG0436	Aminotransferase
BMF08_RS19740	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BMF08_RS19745	COG0490	domain, Protein
BMF08_RS19745	COG0471	metal ion transport
BMF08_RS19750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BMF08_RS19765	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BMF08_RS19775	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BMF08_RS19780	COG3959	Transketolase, thiamine diphosphate binding domain
BMF08_RS19785	COG3037	sugar-specific permease SgaT UlaA
BMF08_RS19795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BMF08_RS19800	COG1609	Transcriptional regulator
BMF08_RS19805	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BMF08_RS19810	COG0622	Phosphoesterase
BMF08_RS19815	COG0625	glutathione transferase activity
BMF08_RS19820	COG0625	glutathione transferase activity
BMF08_RS19825	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BMF08_RS19830	COG1090	epimerase
BMF08_RS19840	COG4598	ABC transporter
BMF08_RS19845	COG4160	amino acid transport
BMF08_RS19850	COG4215	(ABC) transporter
BMF08_RS19865	COG0163	prenyltransferase activity
BMF08_RS19870	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BMF08_RS19875	COG1286	toxin biosynthetic process
BMF08_RS19880	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BMF08_RS19885	COG0285	dihydrofolate synthase activity
BMF08_RS19895	COG0586	Pfam SNARE associated Golgi protein
BMF08_RS19905	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BMF08_RS19920	COG2723	6-phospho-beta-galactosidase activity
BMF08_RS19925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BMF08_RS19940	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BMF08_RS19945	COG0251	oxidation-reduction process
BMF08_RS19955	COG1470	cell adhesion involved in biofilm formation
BMF08_RS19955	COG1388	LysM domain
BMF08_RS19970	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS19975	COG1129	ABC transporter
BMF08_RS19980	COG0371	Dehydrogenase
BMF08_RS19985	COG2879	small protein
BMF08_RS19990	COG1966	Carbon starvation protein
BMF08_RS19995	COG3366	ferrous iron transmembrane transporter activity
BMF08_RS20000	COG0700	Nucleoside recognition
BMF08_RS20010	COG2050	protein possibly involved in aromatic compounds catabolism
BMF08_RS20015	COG1028	Short-chain dehydrogenase reductase Sdr
BMF08_RS20020	COG3433	isochorismatase activity
BMF08_RS20020	COG1535	isochorismatase
BMF08_RS20025	COG1021	2,3-dihydroxybenzoate-AMP ligase
BMF08_RS20030	COG1169	isochorismate synthase
BMF08_RS20035	COG4592	Periplasmic binding protein
BMF08_RS20045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMF08_RS20050	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMF08_RS20055	COG1120	ATPase activity
BMF08_RS20060	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BMF08_RS20065	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BMF08_RS20065	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BMF08_RS20070	COG3251	PFAM MbtH domain protein
BMF08_RS20075	COG2382	esterase
BMF08_RS20080	COG4771	TonB-dependent receptor
BMF08_RS20090	COG0747	negative chemotaxis
BMF08_RS20095	COG0601	transmembrane transport
BMF08_RS20100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMF08_RS20105	COG0444	Belongs to the ABC transporter superfamily
BMF08_RS20110	COG4608	Belongs to the ABC transporter superfamily
BMF08_RS20135	COG4774	siderophore transport
BMF08_RS20150	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BMF08_RS20155	COG5342	invasion associated locus B
BMF08_RS20160	COG0494	nUDIX hydrolase
BMF08_RS20165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BMF08_RS20175	COG1393	Belongs to the ArsC family
BMF08_RS20190	COG0400	carboxylic ester hydrolase activity
BMF08_RS20200	COG2321	neutral zinc metallopeptidase
BMF08_RS20205	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BMF08_RS20210	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BMF08_RS20220	COG2716	regulation of RNA biosynthetic process
BMF08_RS20225	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BMF08_RS20230	COG0628	permease
BMF08_RS20235	COG4783	chaperone-mediated protein folding
BMF08_RS20245	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BMF08_RS20250	COG1446	asparaginase
BMF08_RS20255	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BMF08_RS20265	COG2233	PERMEase
BMF08_RS20270	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BMF08_RS20275	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BMF08_RS20280	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BMF08_RS20300	COG2200	EAL domain
BMF08_RS20310	COG3708	Transcriptional regulator
BMF08_RS20310	COG2207	Transcriptional regulator
BMF08_RS20315	COG3706	GGDEF domain
BMF08_RS20325	COG0726	polysaccharide deacetylase
BMF08_RS20325	COG1649	PFAM Uncharacterised BCR, COG1649
BMF08_RS20330	COG1215	transferase activity, transferring glycosyl groups
BMF08_RS20335	COG3658	cytochrome
BMF08_RS20340	COG3507	Belongs to the glycosyl hydrolase 43 family
BMF08_RS20345	COG2211	Major facilitator Superfamily
BMF08_RS20355	COG0516	GMP reductase activity
BMF08_RS20355	COG0517	IMP dehydrogenase activity
BMF08_RS20375	COG1645	bacterial-type flagellum-dependent swarming motility
BMF08_RS20390	COG2976	Protein conserved in bacteria
BMF08_RS20430	COG0437	4 iron, 4 sulfur cluster binding
BMF08_RS20435	COG0243	molybdopterin cofactor binding
BMF08_RS20440	COG4953	penicillin-binding protein 1C
BMF08_RS20445	COG2373	Large extracellular alpha-helical protein
BMF08_RS20450	COG1263	PTS System
BMF08_RS20450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS20450	COG2190	(PTS) system
BMF08_RS20465	COG2897	thiosulfate sulfurtransferase activity
BMF08_RS20470	COG1737	Transcriptional regulator
BMF08_RS20480	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BMF08_RS20485	COG2975	iron-sulfur cluster assembly
BMF08_RS20490	COG0633	Ferredoxin
BMF08_RS20510	COG0822	iron-sulfur transferase activity
BMF08_RS20530	COG0483	inositol monophosphate 1-phosphatase activity
BMF08_RS20535	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BMF08_RS20540	COG3683	transport system, periplasmic component
BMF08_RS20545	COG3711	transcriptional antiterminator
BMF08_RS20550	COG2814	Major facilitator Superfamily
BMF08_RS20560	COG1129	ABC transporter
BMF08_RS20565	COG1172	Belongs to the binding-protein-dependent transport system permease family
BMF08_RS20575	COG1069	ribulokinase activity
BMF08_RS20580	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BMF08_RS20580	COG0517	IMP dehydrogenase activity
BMF08_RS20600	COG0347	Belongs to the P(II) protein family
BMF08_RS20605	COG2204	response regulator
BMF08_RS20610	COG3170	Tfp pilus assembly protein FimV
BMF08_RS20615	COG2205	protein histidine kinase activity
BMF08_RS20620	COG0047	phosphoribosylformylglycinamidine synthase activity
BMF08_RS20620	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BMF08_RS20625	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BMF08_RS20635	COG0560	Phosphoserine phosphatase
BMF08_RS20640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BMF08_RS20640	COG1263	PTS System
BMF08_RS20645	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BMF08_RS20650	COG1737	Transcriptional regulator
BMF08_RS20655	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BMF08_RS20665	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BMF08_RS20670	COG1381	Involved in DNA repair and RecF pathway recombination
BMF08_RS20690	COG0681	Belongs to the peptidase S26 family
BMF08_RS20700	COG3086	response to oxidative stress
BMF08_RS20705	COG3026	antisigma factor binding
BMF08_RS20720	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BMF08_RS20730	COG0513	Belongs to the DEAD box helicase family
BMF08_RS20745	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMF08_RS20750	COG3118	belongs to the thioredoxin family
BMF08_RS20755	COG3148	PFAM DTW domain containing protein
BMF08_RS20760	COG0045	succinate-CoA ligase (ADP-forming) activity
BMF08_RS20760	COG1042	CoA-binding domain protein
BMF08_RS20760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BMF08_RS20765	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMF08_RS20770	COG5544	Lipoprotein
BMF08_RS20795	COG0542	response to heat
BMF08_RS20800	COG1496	oxidoreductase activity
BMF08_RS20805	COG0564	pseudouridine synthase activity
BMF08_RS20810	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BMF08_RS20815	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BMF08_RS20825	COG0077	Prephenate dehydratase
BMF08_RS20825	COG1605	Chorismate mutase
BMF08_RS20835	COG1605	Chorismate mutase
BMF08_RS20835	COG0287	Prephenate dehydrogenase
BMF08_RS20840	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BMF08_RS20880	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BMF08_RS20885	COG2211	Major facilitator Superfamily
BMF08_RS20895	COG4137	Cytochrome C assembly protein
BMF08_RS20900	COG4536	flavin adenine dinucleotide binding
BMF08_RS20905	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BMF08_RS20920	COG0497	DNA recombination
BMF08_RS20935	COG2867	negative regulation of translational initiation
BMF08_RS20945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BMF08_RS20985	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BMF08_RS20990	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMF08_RS20995	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BMF08_RS21090	COG0740	serine-type endopeptidase activity
BMF08_RS21095	COG4695	Portal protein