locus-tag class description RJ36_RS00005 PF11638 DnaA N-terminal domain RJ36_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RJ36_RS00005 PF00308 Bacterial dnaA protein RJ36_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RJ36_RS00010 PF02767 DNA polymerase III beta subunit, central domain RJ36_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RJ36_RS00015 PF02463 RecF/RecN/SMC N terminal domain RJ36_RS00020 PF00204 DNA gyrase B RJ36_RS00020 PF18053 DNA gyrase B subunit insert domain RJ36_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS00020 PF01751 Toprim domain RJ36_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus RJ36_RS00025 PF17806 Sarcosine oxidase A3 domain RJ36_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS00025 PF08669 Glycine cleavage T-protein C-terminal barrel domain RJ36_RS00025 PF01571 Aminomethyltransferase folate-binding domain RJ36_RS00030 PF02378 Phosphotransferase system, EIIC RJ36_RS00030 PF00367 phosphotransferase system, EIIB RJ36_RS00035 PF06078 Bacterial protein of unknown function (DUF937) RJ36_RS00045 PF01494 FAD binding domain RJ36_RS00050 PF07676 WD40-like Beta Propeller Repeat RJ36_RS00050 PF12566 Protein of unknown function (DUF3748) RJ36_RS00055 PF07119 Protein of unknown function (DUF1375) RJ36_RS00060 PF00011 Hsp20/alpha crystallin family RJ36_RS00065 PF00011 Hsp20/alpha crystallin family RJ36_RS00070 PF02080 TrkA-C domain RJ36_RS00070 PF06826 Predicted Permease Membrane Region RJ36_RS00075 PF07702 UTRA domain RJ36_RS00075 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS00080 PF02378 Phosphotransferase system, EIIC RJ36_RS00080 PF00367 phosphotransferase system, EIIB RJ36_RS00085 PF02056 Family 4 glycosyl hydrolase RJ36_RS00085 PF11975 Family 4 glycosyl hydrolase C-terminal domain RJ36_RS00090 PF02311 AraC-like ligand binding domain RJ36_RS00090 PF12833 Helix-turn-helix domain RJ36_RS00095 PF00474 Sodium:solute symporter family RJ36_RS00100 PF00884 Sulfatase RJ36_RS00100 PF16347 Domain of unknown function (DUF4976) RJ36_RS00105 PF02656 Domain of unknown function (DUF202) RJ36_RS00110 PF02656 Domain of unknown function (DUF202) RJ36_RS00115 PF13186 Iron-sulfur cluster-binding domain RJ36_RS00115 PF04055 Radical SAM superfamily RJ36_RS00120 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS00125 PF07690 Major Facilitator Superfamily RJ36_RS00130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS00130 PF00205 Thiamine pyrophosphate enzyme, central domain RJ36_RS00130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS00135 PF01842 ACT domain RJ36_RS00140 PF01081 KDPG and KHG aldolase RJ36_RS00145 PF05035 2-keto-3-deoxy-galactonokinase RJ36_RS00150 PF07690 Major Facilitator Superfamily RJ36_RS00155 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RJ36_RS00155 PF08666 SAF domain RJ36_RS00160 PF00701 Dihydrodipicolinate synthetase family RJ36_RS00165 PF01614 Bacterial transcriptional regulator RJ36_RS00165 PF09339 IclR helix-turn-helix domain RJ36_RS00170 PF06711 Protein of unknown function (DUF1198) RJ36_RS00175 PF07690 Major Facilitator Superfamily RJ36_RS00185 PF00892 EamA-like transporter family RJ36_RS00190 PF02378 Phosphotransferase system, EIIC RJ36_RS00190 PF00367 phosphotransferase system, EIIB RJ36_RS00195 PF13580 SIS domain RJ36_RS00200 PF07690 Major Facilitator Superfamily RJ36_RS00205 PF02321 Outer membrane efflux protein RJ36_RS00210 PF00873 AcrB/AcrD/AcrF family RJ36_RS00215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS00215 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS00220 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS00220 PF16295 Tetracyclin repressor-like, C-terminal domain RJ36_RS00225 PF07690 Major Facilitator Superfamily RJ36_RS00230 PF08361 MAATS-type transcriptional repressor, C-terminal region RJ36_RS00230 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS00245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS00275 PF13802 Galactose mutarotase-like RJ36_RS00275 PF01055 Glycosyl hydrolases family 31 RJ36_RS00280 PF05170 AsmA family RJ36_RS00285 PF00860 Permease family RJ36_RS00290 PF03616 Sodium/glutamate symporter RJ36_RS00295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RJ36_RS00295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RJ36_RS00300 PF00230 Major intrinsic protein RJ36_RS00305 PF06005 Cell division protein ZapB RJ36_RS00315 PF02611 CDP-diacylglycerol pyrophosphatase RJ36_RS00325 PF00121 Triosephosphate isomerase RJ36_RS00330 PF07305 Protein of unknown function (DUF1454) RJ36_RS00335 PF05656 Protein of unknown function (DUF805) RJ36_RS00340 PF00175 Oxidoreductase NAD-binding domain RJ36_RS00340 PF00970 Oxidoreductase FAD-binding domain RJ36_RS00345 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RJ36_RS00350 PF00270 DEAD/DEAH box helicase RJ36_RS00350 PF00271 Helicase conserved C-terminal domain RJ36_RS00350 PF17191 RecG wedge domain RJ36_RS00355 PF00588 SpoU rRNA Methylase family RJ36_RS00355 PF12105 SpoU, rRNA methylase, C-terminal RJ36_RS00360 PF02824 TGS domain RJ36_RS00360 PF04607 Region found in RelA / SpoT proteins RJ36_RS00360 PF13291 ACT domain RJ36_RS00365 PF01192 RNA polymerase Rpb6 RJ36_RS00370 PF00625 Guanylate kinase RJ36_RS00375 PF03120 NAD-dependent DNA ligase OB-fold domain RJ36_RS00375 PF01653 NAD-dependent DNA ligase adenylation domain RJ36_RS00380 PF03458 UPF0126 domain RJ36_RS00385 PF08340 Domain of unknown function (DUF1732) RJ36_RS00385 PF03755 YicC-like family, N-terminal region RJ36_RS00390 PF03725 3' exoribonuclease family, domain 2 RJ36_RS00390 PF01138 3' exoribonuclease family, domain 1 RJ36_RS00395 PF00156 Phosphoribosyl transferase domain RJ36_RS00400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RJ36_RS00405 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS00410 PF00692 dUTPase RJ36_RS00415 PF04127 DNA / pantothenate metabolism flavoprotein RJ36_RS00415 PF02441 Flavoprotein RJ36_RS00420 PF04002 RadC-like JAB domain RJ36_RS00425 PF00830 Ribosomal L28 family RJ36_RS00430 PF00471 Ribosomal protein L33 RJ36_RS00435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RJ36_RS00435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RJ36_RS00435 PF06827 Zinc finger found in FPG and IleRS RJ36_RS00440 PF01467 Cytidylyltransferase-like RJ36_RS00445 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RJ36_RS00450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RJ36_RS00455 PF00534 Glycosyl transferases group 1 RJ36_RS00455 PF13439 Glycosyltransferase Family 4 RJ36_RS00465 PF01501 Glycosyl transferase family 8 RJ36_RS00465 PF08437 Glycosyl transferase family 8 C-terminal RJ36_RS00470 PF08437 Glycosyl transferase family 8 C-terminal RJ36_RS00470 PF01501 Glycosyl transferase family 8 RJ36_RS00475 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) RJ36_RS00485 PF00534 Glycosyl transferases group 1 RJ36_RS00490 PF04932 O-Antigen ligase RJ36_RS00495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RJ36_RS00500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RJ36_RS00505 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS00510 PF00155 Aminotransferase class I and II RJ36_RS00515 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS00515 PF00107 Zinc-binding dehydrogenase RJ36_RS00520 PF00535 Glycosyl transferase family 2 RJ36_RS00525 PF04748 Divergent polysaccharide deacetylase RJ36_RS00530 PF01551 Peptidase family M23 RJ36_RS00535 PF01676 Metalloenzyme superfamily RJ36_RS00535 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RJ36_RS00540 PF00581 Rhodanese-like domain RJ36_RS00545 PF00462 Glutaredoxin RJ36_RS00550 PF02556 Preprotein translocase subunit SecB RJ36_RS00555 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RJ36_RS00555 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RJ36_RS00560 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS00560 PF06426 Serine acetyltransferase, N-terminal RJ36_RS00565 PF00588 SpoU rRNA Methylase family RJ36_RS00570 PF01070 FMN-dependent dehydrogenase RJ36_RS00575 PF07729 FCD domain RJ36_RS00575 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS00580 PF02652 L-lactate permease RJ36_RS00585 PF10928 Protein of unknown function (DUF2810) RJ36_RS00595 PF05068 Mannitol repressor RJ36_RS00600 PF08125 Mannitol dehydrogenase C-terminal domain RJ36_RS00600 PF01232 Mannitol dehydrogenase Rossmann domain RJ36_RS00605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS00605 PF02378 Phosphotransferase system, EIIC RJ36_RS00605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS00610 PF11742 Protein of unknown function (DUF3302) RJ36_RS00615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS00615 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS00620 PF00043 Glutathione S-transferase, C-terminal domain RJ36_RS00620 PF13417 Glutathione S-transferase, N-terminal domain RJ36_RS00625 PF03841 L-seryl-tRNA selenium transferase RJ36_RS00625 PF12390 Selenocysteine synthase N terminal RJ36_RS00630 PF00009 Elongation factor Tu GTP binding domain RJ36_RS00630 PF09107 Elongation factor SelB, winged helix RJ36_RS00630 PF09106 Elongation factor SelB, winged helix RJ36_RS00630 PF03144 Elongation factor Tu domain 2 RJ36_RS00635 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS00640 PF00171 Aldehyde dehydrogenase family RJ36_RS00645 PF11742 Protein of unknown function (DUF3302) RJ36_RS00650 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS00650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS00655 PF03466 LysR substrate binding domain RJ36_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS00660 PF06629 MltA-interacting protein MipA RJ36_RS00675 PF07944 Beta-L-arabinofuranosidase, GH127 RJ36_RS00690 PF00596 Class II Aldolase and Adducin N-terminal domain RJ36_RS00695 PF01261 Xylose isomerase-like TIM barrel RJ36_RS00700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS00705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RJ36_RS00705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RJ36_RS00710 PF07690 Major Facilitator Superfamily RJ36_RS00715 PF16154 Domain of unknown function (DUF4862) RJ36_RS00720 PF04074 YhcH/YjgK/YiaL RJ36_RS00725 PF02615 Malate/L-lactate dehydrogenase RJ36_RS00730 PF09339 IclR helix-turn-helix domain RJ36_RS00730 PF01614 Bacterial transcriptional regulator RJ36_RS00735 PF13247 4Fe-4S dicluster domain RJ36_RS00740 PF00155 Aminotransferase class I and II RJ36_RS00745 PF00128 Alpha amylase, catalytic domain RJ36_RS00750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RJ36_RS00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS00755 PF03466 LysR substrate binding domain RJ36_RS00765 PF12833 Helix-turn-helix domain RJ36_RS00770 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS00775 PF00005 ABC transporter RJ36_RS00780 PF13407 Periplasmic binding protein domain RJ36_RS00790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RJ36_RS00790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RJ36_RS00795 PF05360 yiaA/B two helix domain RJ36_RS00800 PF01757 Acyltransferase family RJ36_RS00805 PF13983 YsaB-like lipoprotein RJ36_RS00810 PF02091 Glycyl-tRNA synthetase alpha subunit RJ36_RS00815 PF02092 Glycyl-tRNA synthetase beta subunit RJ36_RS00815 PF05746 DALR anticodon binding domain RJ36_RS00820 PF00313 'Cold-shock' DNA-binding domain RJ36_RS00825 PF01381 Helix-turn-helix RJ36_RS00830 PF07690 Major Facilitator Superfamily RJ36_RS00840 PF11254 Protein of unknown function (DUF3053) RJ36_RS00845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RJ36_RS00845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RJ36_RS00855 PF00294 pfkB family carbohydrate kinase RJ36_RS00865 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS00870 PF13488 Glycine zipper RJ36_RS00870 PF00691 OmpA family RJ36_RS00875 PF00384 Molybdopterin oxidoreductase RJ36_RS00875 PF18364 Molybdopterin oxidoreductase N-terminal domain RJ36_RS00875 PF01568 Molydopterin dinucleotide binding domain RJ36_RS00880 PF00583 Acetyltransferase (GNAT) family RJ36_RS00885 PF03352 Methyladenine glycosylase RJ36_RS00890 PF03797 Autotransporter beta-domain RJ36_RS00895 PF07690 Major Facilitator Superfamily RJ36_RS00900 PF08019 Phosphoethanolamine transferase EptA/EptB RJ36_RS00900 PF00884 Sulfatase RJ36_RS00910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS00915 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS00920 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS00920 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS00925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS00925 PF00005 ABC transporter RJ36_RS00930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS00930 PF00005 ABC transporter RJ36_RS00935 PF13940 Toxin Ldr, type I toxin-antitoxin system RJ36_RS00940 PF11658 Cellulose biosynthesis protein BcsG RJ36_RS00945 PF11120 Cellulose biosynthesis protein BcsF RJ36_RS00950 PF10995 Cellulose biosynthesis GIL RJ36_RS00955 PF10945 Cellulose biosynthesis protein BcsR RJ36_RS00960 PF06564 Cellulose biosynthesis protein BcsQ RJ36_RS00965 PF07238 PilZ domain RJ36_RS00965 PF00535 Glycosyl transferase family 2 RJ36_RS00965 PF03552 Cellulose synthase RJ36_RS00970 PF03170 Bacterial cellulose synthase subunit RJ36_RS00975 PF01270 Glycosyl hydrolases family 8 RJ36_RS00980 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) RJ36_RS00985 PF00563 EAL domain RJ36_RS00985 PF17154 Gammaproteobacterial periplasmic sensor domain RJ36_RS00985 PF00672 HAMP domain RJ36_RS00985 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS00990 PF00375 Sodium:dicarboxylate symporter family RJ36_RS00995 PF05193 Peptidase M16 inactive domain RJ36_RS00995 PF00675 Insulinase (Peptidase family M16) RJ36_RS01000 PF00665 Integrase core domain RJ36_RS01005 PF00294 pfkB family carbohydrate kinase RJ36_RS01010 PF00563 EAL domain RJ36_RS01015 PF05170 AsmA family RJ36_RS01020 PF00083 Sugar (and other) transporter RJ36_RS01020 PF07690 Major Facilitator Superfamily RJ36_RS01025 PF03631 Virulence factor BrkB RJ36_RS01030 PF03466 LysR substrate binding domain RJ36_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS01035 PF00106 short chain dehydrogenase RJ36_RS01040 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS01055 PF01204 Trehalase RJ36_RS01060 PF06977 SdiA-regulated RJ36_RS01065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJ36_RS01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS01070 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RJ36_RS01080 PF01432 Peptidase family M3 RJ36_RS01085 PF04445 Putative SAM-dependent methyltransferase RJ36_RS01090 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS01095 PF02082 Transcriptional regulator RJ36_RS01100 PF00582 Universal stress protein family RJ36_RS01105 PF10625 Universal stress protein B (UspB) RJ36_RS01110 PF01384 Phosphate transporter family RJ36_RS01120 PF00571 CBS domain RJ36_RS01120 PF01769 Divalent cation transporter RJ36_RS01120 PF03448 MgtE intracellular N domain RJ36_RS01125 PF13533 Biotin-lipoyl like RJ36_RS01130 PF00005 ABC transporter RJ36_RS01140 PF03466 LysR substrate binding domain RJ36_RS01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS01145 PF05870 Phenolic acid decarboxylase (PAD) RJ36_RS01150 PF01594 AI-2E family transporter RJ36_RS01155 PF07690 Major Facilitator Superfamily RJ36_RS01160 PF08786 DcrB RJ36_RS01165 PF02592 Putative vitamin uptake transporter RJ36_RS01170 PF01206 Sulfurtransferase TusA RJ36_RS01175 PF03480 Bacterial extracellular solute-binding protein, family 7 RJ36_RS01185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RJ36_RS01190 PF00403 Heavy-metal-associated domain RJ36_RS01195 PF07947 YhhN family RJ36_RS01200 PF10694 Protein of unknown function (DUF2500) RJ36_RS01205 PF06611 Protein of unknown function (DUF1145) RJ36_RS01215 PF00448 SRP54-type protein, GTPase domain RJ36_RS01215 PF02881 SRP54-type protein, helical bundle domain RJ36_RS01220 PF00005 ABC transporter RJ36_RS01225 PF02687 FtsX-like permease family RJ36_RS01225 PF18075 FtsX extracellular domain RJ36_RS01230 PF04545 Sigma-70, region 4 RJ36_RS01230 PF04542 Sigma-70 region 2 RJ36_RS01235 PF13458 Periplasmic binding protein RJ36_RS01255 PF12568 Acetyltransferase (GNAT) domain, PanZ RJ36_RS01260 PF13458 Periplasmic binding protein RJ36_RS01265 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS01270 PF11862 Domain of unknown function (DUF3382) RJ36_RS01270 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS01275 PF12399 Branched-chain amino acid ATP-binding cassette transporter RJ36_RS01275 PF00005 ABC transporter RJ36_RS01280 PF00005 ABC transporter RJ36_RS01285 PF13416 Bacterial extracellular solute-binding protein RJ36_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS01300 PF17912 MalK OB fold domain RJ36_RS01300 PF00005 ABC transporter RJ36_RS01305 PF03009 Glycerophosphoryl diester phosphodiesterase family RJ36_RS01310 PF10956 Protein of unknown function (DUF2756) RJ36_RS01320 PF00583 Acetyltransferase (GNAT) family RJ36_RS01325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS01325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS01330 PF17954 Quercetinase C-terminal cupin domain RJ36_RS01330 PF02678 Pirin RJ36_RS01335 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS01335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RJ36_RS01340 PF01202 Shikimate kinase RJ36_RS01345 PF02447 GntP family permease RJ36_RS01350 PF01914 MarC family integral membrane protein RJ36_RS01355 PF02774 Semialdehyde dehydrogenase, dimerisation domain RJ36_RS01355 PF01118 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS01360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RJ36_RS01360 PF00128 Alpha amylase, catalytic domain RJ36_RS01360 PF02806 Alpha amylase, C-terminal all-beta domain RJ36_RS01365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RJ36_RS01365 PF18390 Glycogen debranching enzyme C-terminal domain RJ36_RS01365 PF00128 Alpha amylase, catalytic domain RJ36_RS01370 PF00483 Nucleotidyl transferase RJ36_RS01375 PF00534 Glycosyl transferases group 1 RJ36_RS01375 PF08323 Starch synthase catalytic domain RJ36_RS01380 PF00343 Carbohydrate phosphorylase RJ36_RS01395 PF01266 FAD dependent oxidoreductase RJ36_RS01395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RJ36_RS01400 PF00581 Rhodanese-like domain RJ36_RS01405 PF01694 Rhomboid family RJ36_RS01405 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease RJ36_RS01410 PF00455 DeoR C terminal sensor domain RJ36_RS01410 PF08220 DeoR-like helix-turn-helix domain RJ36_RS01420 PF17874 MalT-like TPR region RJ36_RS01420 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS01430 PF00343 Carbohydrate phosphorylase RJ36_RS01435 PF02446 4-alpha-glucanotransferase RJ36_RS01440 PF02447 GntP family permease RJ36_RS01445 PF01521 Iron-sulphur cluster biosynthesis RJ36_RS01445 PF01106 NifU-like domain RJ36_RS01450 PF00156 Phosphoribosyl transferase domain RJ36_RS01455 PF00561 alpha/beta hydrolase fold RJ36_RS01465 PF09012 FeoC like transcriptional regulator RJ36_RS01470 PF02421 Ferrous iron transport protein B RJ36_RS01470 PF17910 FeoB cytosolic helical domain RJ36_RS01470 PF07664 Ferrous iron transport protein B C terminus RJ36_RS01470 PF07670 Nucleoside recognition RJ36_RS01475 PF04023 FeoA domain RJ36_RS01480 PF17674 HHH domain RJ36_RS01480 PF09371 Tex-like protein N-terminal domain RJ36_RS01480 PF16921 Tex protein YqgF-like domain RJ36_RS01480 PF00575 S1 RNA binding domain RJ36_RS01485 PF01272 Transcription elongation factor, GreA/GreB, C-term RJ36_RS01485 PF03449 Transcription elongation factor, N-terminal RJ36_RS01490 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS01490 PF00072 Response regulator receiver domain RJ36_RS01495 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS01495 PF00672 HAMP domain RJ36_RS01510 PF01293 Phosphoenolpyruvate carboxykinase RJ36_RS01515 PF13687 Domain of unknown function (DUF4153) RJ36_RS01520 PF01430 Hsp33 protein RJ36_RS01525 PF01479 S4 domain RJ36_RS01530 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS01535 PF07095 Intracellular growth attenuator protein IgaA RJ36_RS01540 PF00293 NUDIX domain RJ36_RS01545 PF00912 Transglycosylase RJ36_RS01545 PF17092 Penicillin-binding protein OB-like domain RJ36_RS01545 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS01565 PF10748 DNA utilization proteins HofP RJ36_RS01570 PF03958 Bacterial type II/III secretion system short domain RJ36_RS01570 PF00263 Bacterial type II and III secretion system protein RJ36_RS01575 PF01202 Shikimate kinase RJ36_RS01580 PF01761 3-dehydroquinate synthase RJ36_RS01585 PF05036 Sporulation related domain RJ36_RS01590 PF02086 D12 class N6 adenine-specific DNA methyltransferase RJ36_RS01595 PF00834 Ribulose-phosphate 3 epimerase family RJ36_RS01600 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS01605 PF00579 tRNA synthetases class I (W and Y) RJ36_RS01615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS01615 PF14824 Sirohaem biosynthesis protein central RJ36_RS01615 PF10414 Sirohaem synthase dimerisation region RJ36_RS01620 PF13806 Rieske-like [2Fe-2S] domain RJ36_RS01625 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS01625 PF04324 BFD-like [2Fe-2S] binding domain RJ36_RS01625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RJ36_RS01625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RJ36_RS01625 PF18267 Rubredoxin NAD+ reductase C-terminal domain RJ36_RS01630 PF07969 Amidohydrolase family RJ36_RS01635 PF07690 Major Facilitator Superfamily RJ36_RS01640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RJ36_RS01645 PF02661 Fic/DOC family RJ36_RS01650 PF00117 Glutamine amidotransferase class-I RJ36_RS01655 PF00202 Aminotransferase class-III RJ36_RS01660 PF12805 FUSC-like inner membrane protein yccS RJ36_RS01665 PF13545 Crp-like helix-turn-helix domain RJ36_RS01665 PF00027 Cyclic nucleotide-binding domain RJ36_RS01670 PF02566 OsmC-like protein RJ36_RS01675 PF00485 Phosphoribulokinase / Uridine kinase family RJ36_RS01680 PF06794 Uncharacterised protein family (UPF0270) RJ36_RS01685 PF00561 alpha/beta hydrolase fold RJ36_RS01690 PF16957 Malonate decarboxylase, alpha subunit, transporter RJ36_RS01695 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RJ36_RS01700 PF06857 Malonate decarboxylase delta subunit (MdcD) RJ36_RS01705 PF01039 Carboxyl transferase domain RJ36_RS01715 PF03547 Membrane transport protein RJ36_RS01720 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG RJ36_RS01725 PF00698 Acyl transferase domain RJ36_RS01730 PF03466 LysR substrate binding domain RJ36_RS01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS01735 PF00005 ABC transporter RJ36_RS01735 PF12848 ABC transporter RJ36_RS01740 PF02525 Flavodoxin-like fold RJ36_RS01745 PF00999 Sodium/hydrogen exchanger family RJ36_RS01745 PF02254 TrkA-N domain RJ36_RS01750 PF09526 Probable metal-binding protein (DUF2387) RJ36_RS01755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJ36_RS01760 PF04102 SlyX RJ36_RS01765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RJ36_RS01765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJ36_RS01770 PF13309 HTH domain RJ36_RS01770 PF08348 YheO-like PAS domain RJ36_RS01775 PF02635 DsrE/DsrF-like family RJ36_RS01780 PF02635 DsrE/DsrF-like family RJ36_RS01785 PF04077 DsrH like protein RJ36_RS01790 PF00164 Ribosomal protein S12/S23 RJ36_RS01795 PF00177 Ribosomal protein S7p/S5e RJ36_RS01800 PF03764 Elongation factor G, domain IV RJ36_RS01800 PF14492 Elongation Factor G, domain II RJ36_RS01800 PF00679 Elongation factor G C-terminus RJ36_RS01800 PF03144 Elongation factor Tu domain 2 RJ36_RS01800 PF00009 Elongation factor Tu GTP binding domain RJ36_RS01805 PF00009 Elongation factor Tu GTP binding domain RJ36_RS01805 PF03143 Elongation factor Tu C-terminal domain RJ36_RS01805 PF03144 Elongation factor Tu domain 2 RJ36_RS01810 PF04324 BFD-like [2Fe-2S] binding domain RJ36_RS01815 PF00210 Ferritin-like domain RJ36_RS01820 PF01478 Type IV leader peptidase family RJ36_RS01825 PF00338 Ribosomal protein S10p/S20e RJ36_RS01830 PF00297 Ribosomal protein L3 RJ36_RS01835 PF00573 Ribosomal protein L4/L1 family RJ36_RS01840 PF00276 Ribosomal protein L23 RJ36_RS01845 PF00181 Ribosomal Proteins L2, RNA binding domain RJ36_RS01845 PF03947 Ribosomal Proteins L2, C-terminal domain RJ36_RS01850 PF00203 Ribosomal protein S19 RJ36_RS01855 PF00237 Ribosomal protein L22p/L17e RJ36_RS01860 PF00189 Ribosomal protein S3, C-terminal domain RJ36_RS01860 PF07650 KH domain RJ36_RS01865 PF00252 Ribosomal protein L16p/L10e RJ36_RS01870 PF00831 Ribosomal L29 protein RJ36_RS01875 PF00366 Ribosomal protein S17 RJ36_RS01880 PF00238 Ribosomal protein L14p/L23e RJ36_RS01885 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RJ36_RS01885 PF00467 KOW motif RJ36_RS01890 PF00281 Ribosomal protein L5 RJ36_RS01890 PF00673 ribosomal L5P family C-terminus RJ36_RS01895 PF00253 Ribosomal protein S14p/S29e RJ36_RS01900 PF00410 Ribosomal protein S8 RJ36_RS01905 PF00347 Ribosomal protein L6 RJ36_RS01910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RJ36_RS01915 PF00333 Ribosomal protein S5, N-terminal domain RJ36_RS01915 PF03719 Ribosomal protein S5, C-terminal domain RJ36_RS01920 PF00327 Ribosomal protein L30p/L7e RJ36_RS01925 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RJ36_RS01930 PF00344 SecY translocase RJ36_RS01935 PF00416 Ribosomal protein S13/S18 RJ36_RS01940 PF00411 Ribosomal protein S11 RJ36_RS01945 PF00163 Ribosomal protein S4/S9 N-terminal domain RJ36_RS01945 PF01479 S4 domain RJ36_RS01950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RJ36_RS01950 PF01000 RNA polymerase Rpb3/RpoA insert domain RJ36_RS01950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RJ36_RS01955 PF01196 Ribosomal protein L17 RJ36_RS01960 PF09350 Domain of unknown function (DUF1992) RJ36_RS01965 PF13411 MerR HTH family regulatory protein RJ36_RS01970 PF03889 Alternative ribosome-rescue factor A RJ36_RS01975 PF01741 Large-conductance mechanosensitive channel, MscL RJ36_RS01980 PF02080 TrkA-C domain RJ36_RS01980 PF02254 TrkA-N domain RJ36_RS01985 PF01189 16S rRNA methyltransferase RsmB/F RJ36_RS01985 PF01029 NusB family RJ36_RS01990 PF00551 Formyl transferase RJ36_RS01990 PF02911 Formyl transferase, C-terminal domain RJ36_RS01995 PF01327 Polypeptide deformylase RJ36_RS02000 PF02481 DNA recombination-mediator protein A RJ36_RS02000 PF17782 DprA winged helix domain RJ36_RS02005 PF04361 Protein of unknown function (DUF494) RJ36_RS02010 PF01396 Topoisomerase DNA binding C4 zinc finger RJ36_RS02015 PF01300 Telomere recombination RJ36_RS02020 PF08501 Shikimate dehydrogenase substrate binding domain RJ36_RS02020 PF01488 Shikimate / quinate 5-dehydrogenase RJ36_RS02020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RJ36_RS02025 PF07369 Protein of unknown function (DUF1488) RJ36_RS02030 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS02065 PF00005 ABC transporter RJ36_RS02070 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS02075 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS02080 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS02090 PF00873 AcrB/AcrD/AcrF family RJ36_RS02095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS02095 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS02100 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS02100 PF08361 MAATS-type transcriptional repressor, C-terminal region RJ36_RS02110 PF02954 Bacterial regulatory protein, Fis family RJ36_RS02115 PF01207 Dihydrouridine synthase (Dus) RJ36_RS02125 PF00474 Sodium:solute symporter family RJ36_RS02130 PF06196 Protein of unknown function (DUF997) RJ36_RS02135 PF02785 Biotin carboxylase C-terminal domain RJ36_RS02135 PF00289 Biotin carboxylase, N-terminal domain RJ36_RS02135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RJ36_RS02140 PF00364 Biotin-requiring enzyme RJ36_RS02145 PF01220 Dehydroquinase class II RJ36_RS02150 PF01794 Ferric reductase like transmembrane component RJ36_RS02155 PF00174 Oxidoreductase molybdopterin binding domain RJ36_RS02160 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS02160 PF00107 Zinc-binding dehydrogenase RJ36_RS02165 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS02165 PF00563 EAL domain RJ36_RS02165 PF17157 Gammaproteobacterial periplasmic sensor domain RJ36_RS02175 PF04085 rod shape-determining protein MreC RJ36_RS02180 PF04093 rod shape-determining protein MreD RJ36_RS02185 PF02545 Maf-like protein RJ36_RS02190 PF00575 S1 RNA binding domain RJ36_RS02190 PF10150 Ribonuclease E/G family RJ36_RS02195 PF13116 Protein of unknown function RJ36_RS02195 PF13502 AsmA-like C-terminal region RJ36_RS02200 PF01523 Putative modulator of DNA gyrase RJ36_RS02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS02205 PF03466 LysR substrate binding domain RJ36_RS02210 PF13533 Biotin-lipoyl like RJ36_RS02215 PF04632 Fusaric acid resistance protein family RJ36_RS02220 PF01337 Barstar (barnase inhibitor) RJ36_RS02225 PF07338 Protein of unknown function (DUF1471) RJ36_RS02230 PF07338 Protein of unknown function (DUF1471) RJ36_RS02235 PF02863 Arginine repressor, C-terminal domain RJ36_RS02235 PF01316 Arginine repressor, DNA binding domain RJ36_RS02240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RJ36_RS02240 PF00056 lactate/malate dehydrogenase, NAD binding domain RJ36_RS02250 PF13180 PDZ domain RJ36_RS02255 PF13180 PDZ domain RJ36_RS02255 PF00595 PDZ domain RJ36_RS02260 PF06295 Protein of unknown function (DUF1043) RJ36_RS02265 PF03969 AFG1-like ATPase RJ36_RS02270 PF00572 Ribosomal protein L13 RJ36_RS02275 PF00380 Ribosomal protein S9/S16 RJ36_RS02280 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS02280 PF00043 Glutathione S-transferase, C-terminal domain RJ36_RS02285 PF04386 Stringent starvation protein B RJ36_RS02290 PF07729 FCD domain RJ36_RS02290 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS02295 PF00701 Dihydrodipicolinate synthetase family RJ36_RS02300 PF07690 Major Facilitator Superfamily RJ36_RS02305 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RJ36_RS02310 PF00480 ROK family RJ36_RS02315 PF04074 YhcH/YjgK/YiaL RJ36_RS02320 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS02320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RJ36_RS02325 PF04898 Glutamate synthase central domain RJ36_RS02325 PF00310 Glutamine amidotransferases class-II RJ36_RS02325 PF01645 Conserved region in glutamate synthase RJ36_RS02325 PF01493 GXGXG motif RJ36_RS02330 PF16199 Radical_SAM C-terminal domain RJ36_RS02330 PF04055 Radical SAM superfamily RJ36_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS02335 PF00072 Response regulator receiver domain RJ36_RS02335 PF18415 Histidine kinase receptor ArcB trans-membrane domain RJ36_RS02335 PF00989 PAS fold RJ36_RS02335 PF01627 Hpt domain RJ36_RS02335 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS02345 PF00912 Transglycosylase RJ36_RS02350 PF10707 PhoP regulatory network protein YrbL RJ36_RS02355 PF00381 PTS HPr component phosphorylation site RJ36_RS02360 PF03668 P-loop ATPase protein family RJ36_RS02365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS02370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RJ36_RS02375 PF04963 Sigma-54 factor, core binding domain RJ36_RS02375 PF04552 Sigma-54, DNA binding domain RJ36_RS02375 PF00309 Sigma-54 factor, Activator interacting domain (AID) RJ36_RS02380 PF12399 Branched-chain amino acid ATP-binding cassette transporter RJ36_RS02380 PF00005 ABC transporter RJ36_RS02385 PF03968 OstA-like protein RJ36_RS02390 PF06835 Lipopolysaccharide-assembly, LptC-related RJ36_RS02400 PF00571 CBS domain RJ36_RS02400 PF01380 SIS domain RJ36_RS02405 PF01699 Sodium/calcium exchanger protein RJ36_RS02410 PF00005 ABC transporter RJ36_RS02415 PF02405 Permease MlaE RJ36_RS02420 PF02470 MlaD protein RJ36_RS02425 PF05494 MlaC protein RJ36_RS02430 PF13466 STAS domain RJ36_RS02435 PF01722 BolA-like protein RJ36_RS02440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RJ36_RS02445 PF13693 Winged helix-turn-helix DNA-binding RJ36_RS02450 PF00348 Polyprenyl synthetase RJ36_RS02455 PF00829 Ribosomal prokaryotic L21 protein RJ36_RS02460 PF01016 Ribosomal L27 protein RJ36_RS02465 PF00892 EamA-like transporter family RJ36_RS02470 PF01018 GTP1/OBG RJ36_RS02470 PF01926 50S ribosome-binding GTPase RJ36_RS02475 PF00884 Sulfatase RJ36_RS02480 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RJ36_RS02485 PF03449 Transcription elongation factor, N-terminal RJ36_RS02485 PF01272 Transcription elongation factor, GreA/GreB, C-term RJ36_RS02490 PF01985 CRS1 / YhbY (CRM) domain RJ36_RS02495 PF01728 FtsJ-like methyltransferase RJ36_RS02500 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS02500 PF17862 AAA+ lid domain RJ36_RS02500 PF06480 FtsH Extracellular RJ36_RS02500 PF01434 Peptidase family M41 RJ36_RS02505 PF00809 Pterin binding enzyme RJ36_RS02510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RJ36_RS02510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RJ36_RS02510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RJ36_RS02510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RJ36_RS02515 PF05946 Toxin-coregulated pilus subunit TcpA RJ36_RS02515 PF07963 Prokaryotic N-terminal methylation motif RJ36_RS02550 PF00437 Type II/IV secretion system protein RJ36_RS02555 PF00482 Type II secretion system (T2SS), protein F RJ36_RS02575 PF03840 Preprotein translocase SecG subunit RJ36_RS02595 PF00764 Arginosuccinate synthase RJ36_RS02605 PF17384 RimP C-terminal SH3 domain RJ36_RS02605 PF02576 RimP N-terminal domain RJ36_RS02610 PF00575 S1 RNA binding domain RJ36_RS02610 PF13184 NusA-like KH domain RJ36_RS02610 PF08529 NusA N-terminal domain RJ36_RS02615 PF04760 Translation initiation factor IF-2, N-terminal region RJ36_RS02615 PF11987 Translation-initiation factor 2 RJ36_RS02615 PF00009 Elongation factor Tu GTP binding domain RJ36_RS02615 PF08364 Bacterial translation initiation factor IF-2 associated region RJ36_RS02620 PF02033 Ribosome-binding factor A RJ36_RS02625 PF01509 TruB family pseudouridylate synthase (N terminal domain) RJ36_RS02625 PF16198 tRNA pseudouridylate synthase B C-terminal domain RJ36_RS02625 PF09157 Pseudouridine synthase II TruB, C-terminal RJ36_RS02630 PF00312 Ribosomal protein S15 RJ36_RS02635 PF03725 3' exoribonuclease family, domain 2 RJ36_RS02635 PF01138 3' exoribonuclease family, domain 1 RJ36_RS02635 PF00575 S1 RNA binding domain RJ36_RS02635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RJ36_RS02635 PF00013 KH domain RJ36_RS02640 PF13181 Tetratricopeptide repeat RJ36_RS02640 PF07719 Tetratricopeptide repeat RJ36_RS02645 PF00271 Helicase conserved C-terminal domain RJ36_RS02645 PF03880 DbpA RNA binding domain RJ36_RS02645 PF12343 Cold shock protein DEAD box A RJ36_RS02645 PF00270 DEAD/DEAH box helicase RJ36_RS02650 PF03222 Tryptophan/tyrosine permease family RJ36_RS02655 PF00296 Luciferase-like monooxygenase RJ36_RS02660 PF01136 Peptidase family U32 RJ36_RS02665 PF01136 Peptidase family U32 RJ36_RS02670 PF02036 SCP-2 sterol transfer family RJ36_RS02675 PF13508 Acetyltransferase (GNAT) domain RJ36_RS02680 PF01541 GIY-YIG catalytic domain RJ36_RS02690 PF01965 DJ-1/PfpI family RJ36_RS02695 PF13460 NAD(P)H-binding RJ36_RS02700 PF04972 BON domain RJ36_RS02705 PF13580 SIS domain RJ36_RS02710 PF02021 Uncharacterised protein family UPF0102 RJ36_RS02715 PF04348 LppC putative lipoprotein RJ36_RS02720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS02725 PF00419 Fimbrial protein RJ36_RS02730 PF00577 Outer membrane usher protein RJ36_RS02730 PF13954 PapC N-terminal domain RJ36_RS02730 PF13953 PapC C-terminal domain RJ36_RS02735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS02735 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS02740 PF00419 Fimbrial protein RJ36_RS02745 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RJ36_RS02745 PF08666 SAF domain RJ36_RS02750 PF07690 Major Facilitator Superfamily RJ36_RS02755 PF03328 HpcH/HpaI aldolase/citrate lyase family RJ36_RS02760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RJ36_RS02760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RJ36_RS02765 PF02595 Glycerate kinase family RJ36_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS02770 PF03466 LysR substrate binding domain RJ36_RS02775 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS02780 PF03222 Tryptophan/tyrosine permease family RJ36_RS02785 PF00871 Acetokinase family RJ36_RS02790 PF02901 Pyruvate formate lyase-like RJ36_RS02790 PF01228 Glycine radical RJ36_RS02795 PF01042 Endoribonuclease L-PSP RJ36_RS02800 PF03313 Serine dehydratase alpha chain RJ36_RS02800 PF03315 Serine dehydratase beta chain RJ36_RS02805 PF17954 Quercetinase C-terminal cupin domain RJ36_RS02805 PF02678 Pirin RJ36_RS02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS02810 PF03466 LysR substrate binding domain RJ36_RS02815 PF05656 Protein of unknown function (DUF805) RJ36_RS02820 PF13409 Glutathione S-transferase, N-terminal domain RJ36_RS02825 PF07681 DoxX RJ36_RS02830 PF04754 Putative transposase, YhgA-like RJ36_RS02835 PF13997 YqjK-like protein RJ36_RS02840 PF07332 Putative Actinobacterial Holin-X, holin superfamily III RJ36_RS02845 PF05957 Bacterial protein of unknown function (DUF883) RJ36_RS02850 PF06476 Protein of unknown function (DUF1090) RJ36_RS02855 PF13721 SecD export protein N-terminal TM region RJ36_RS02860 PF09335 SNARE associated Golgi protein RJ36_RS02865 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS02865 PF07729 FCD domain RJ36_RS02870 PF07690 Major Facilitator Superfamily RJ36_RS02875 PF02614 Glucuronate isomerase RJ36_RS02880 PF08666 SAF domain RJ36_RS02880 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RJ36_RS02885 PF10688 Bacterial inner membrane protein RJ36_RS02890 PF00375 Sodium:dicarboxylate symporter family RJ36_RS02895 PF03741 Integral membrane protein TerC family RJ36_RS02900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS02905 PF02698 DUF218 domain RJ36_RS02910 PF01863 Protein of unknown function DUF45 RJ36_RS02915 PF05175 Methyltransferase small domain RJ36_RS02920 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS02920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS02925 PF00202 Aminotransferase class-III RJ36_RS02930 PF08447 PAS fold RJ36_RS02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS02935 PF03551 Transcriptional regulator PadR-like family RJ36_RS02940 PF04954 Siderophore-interacting protein RJ36_RS02940 PF08021 Siderophore-interacting FAD-binding domain RJ36_RS02945 PF00005 ABC transporter RJ36_RS02945 PF09383 NIL domain RJ36_RS02950 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS02955 PF03180 NLPA lipoprotein RJ36_RS02965 PF02683 Cytochrome C biogenesis protein transmembrane region RJ36_RS02965 PF11412 Disulphide bond corrector protein DsbC RJ36_RS02965 PF13098 Thioredoxin-like domain RJ36_RS02970 PF06965 Na+/H+ antiporter 1 RJ36_RS02970 PF13462 Thioredoxin RJ36_RS02975 PF00578 AhpC/TSA family RJ36_RS03000 PF08986 Domain of unknown function (DUF1889) RJ36_RS03010 PF03167 Uracil DNA glycosylase superfamily RJ36_RS03015 PF04545 Sigma-70, region 4 RJ36_RS03015 PF04542 Sigma-70 region 2 RJ36_RS03015 PF04539 Sigma-70 region 3 RJ36_RS03015 PF03979 Sigma-70 factor, region 1.1 RJ36_RS03015 PF04546 Sigma-70, non-essential region RJ36_RS03015 PF00140 Sigma-70 factor, region 1.2 RJ36_RS03020 PF08278 DNA primase DnaG DnaB-binding RJ36_RS03020 PF10410 DnaB-helicase binding domain of primase RJ36_RS03020 PF08275 DNA primase catalytic core, N-terminal domain RJ36_RS03020 PF01807 CHC2 zinc finger RJ36_RS03025 PF01165 Ribosomal protein S21 RJ36_RS03030 PF00814 Glycoprotease family RJ36_RS03035 PF02660 Glycerol-3-phosphate acyltransferase RJ36_RS03040 PF02152 Dihydroneopterin aldolase RJ36_RS03045 PF02673 Bacitracin resistance protein BacA RJ36_RS03050 PF01743 Poly A polymerase head domain RJ36_RS03050 PF01966 HD domain RJ36_RS03050 PF12627 Probable RNA and SrmB- binding site of polymerase A RJ36_RS03055 PF08239 Bacterial SH3 domain RJ36_RS03060 PF01928 CYTH domain RJ36_RS03065 PF03710 Glutamate-ammonia ligase adenylyltransferase RJ36_RS03065 PF08335 GlnD PII-uridylyltransferase RJ36_RS03070 PF00294 pfkB family carbohydrate kinase RJ36_RS03070 PF01467 Cytidylyltransferase-like RJ36_RS03075 PF08971 Glycogen synthesis protein RJ36_RS03080 PF04380 Membrane fusogenic activity RJ36_RS03085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RJ36_RS03090 PF00419 Fimbrial protein RJ36_RS03095 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS03095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS03100 PF13954 PapC N-terminal domain RJ36_RS03100 PF13953 PapC C-terminal domain RJ36_RS03100 PF00577 Outer membrane usher protein RJ36_RS03110 PF02535 ZIP Zinc transporter RJ36_RS03115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RJ36_RS03120 PF03738 Glutathionylspermidine synthase preATP-grasp RJ36_RS03125 PF06693 Protein of unknown function (DUF1190) RJ36_RS03130 PF02321 Outer membrane efflux protein RJ36_RS03135 PF00293 NUDIX domain RJ36_RS03140 PF06853 Protein of unknown function (DUF1249) RJ36_RS03145 PF00149 Calcineurin-like phosphoesterase RJ36_RS03150 PF05728 Uncharacterised protein family (UPF0227) RJ36_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS03155 PF00986 DNA gyrase B subunit, carboxyl terminus RJ36_RS03155 PF00204 DNA gyrase B RJ36_RS03155 PF01751 Toprim domain RJ36_RS03160 PF12833 Helix-turn-helix domain RJ36_RS03160 PF02311 AraC-like ligand binding domain RJ36_RS03170 PF01306 LacY proton/sugar symporter RJ36_RS03175 PF07470 Glycosyl Hydrolase Family 88 RJ36_RS03180 PF03992 Antibiotic biosynthesis monooxygenase RJ36_RS03185 PF02525 Flavodoxin-like fold RJ36_RS03195 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS03195 PF08521 Two-component sensor kinase N-terminal RJ36_RS03200 PF00072 Response regulator receiver domain RJ36_RS03200 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS03205 PF04076 Bacterial OB fold (BOF) protein RJ36_RS03210 PF06445 GyrI-like small molecule binding domain RJ36_RS03215 PF03989 DNA gyrase C-terminal domain, beta-propeller RJ36_RS03215 PF00521 DNA gyrase/topoisomerase IV, subunit A RJ36_RS03220 PF01553 Acyltransferase RJ36_RS03225 PF00394 Multicopper oxidase RJ36_RS03225 PF07731 Multicopper oxidase RJ36_RS03225 PF07732 Multicopper oxidase RJ36_RS03230 PF01435 Peptidase family M48 RJ36_RS03235 PF04011 LemA family RJ36_RS03245 PF08497 Radical SAM N-terminal RJ36_RS03245 PF04055 Radical SAM superfamily RJ36_RS03245 PF11842 Domain of unknown function (DUF3362) RJ36_RS03260 PF00939 Sodium:sulfate symporter transmembrane region RJ36_RS03265 PF00248 Aldo/keto reductase family RJ36_RS03270 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS03275 PF06719 AraC-type transcriptional regulator N-terminus RJ36_RS03275 PF12833 Helix-turn-helix domain RJ36_RS03280 PF09335 SNARE associated Golgi protein RJ36_RS03285 PF01053 Cys/Met metabolism PLP-dependent enzyme RJ36_RS03295 PF01618 MotA/TolQ/ExbB proton channel family RJ36_RS03300 PF02472 Biopolymer transport protein ExbD/TolR RJ36_RS03305 PF00672 HAMP domain RJ36_RS03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS03305 PF02203 Tar ligand binding domain homologue RJ36_RS03310 PF03350 Uncharacterized protein family, UPF0114 RJ36_RS03315 PF00248 Aldo/keto reductase family RJ36_RS03320 PF01738 Dienelactone hydrolase family RJ36_RS03325 PF11115 Protein of unknown function (DUF2623) RJ36_RS03330 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS03335 PF05257 CHAP domain RJ36_RS03335 PF03738 Glutathionylspermidine synthase preATP-grasp RJ36_RS03340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS03345 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS03355 PF00005 ABC transporter RJ36_RS03360 PF00005 ABC transporter RJ36_RS03365 PF01402 Ribbon-helix-helix protein, copG family RJ36_RS03365 PF08753 NikR C terminal nickel binding domain RJ36_RS03370 PF00419 Fimbrial protein RJ36_RS03375 PF00577 Outer membrane usher protein RJ36_RS03375 PF13953 PapC C-terminal domain RJ36_RS03375 PF13954 PapC N-terminal domain RJ36_RS03380 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS03380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS03390 PF00419 Fimbrial protein RJ36_RS03395 PF00419 Fimbrial protein RJ36_RS03400 PF00577 Outer membrane usher protein RJ36_RS03400 PF13953 PapC C-terminal domain RJ36_RS03400 PF13954 PapC N-terminal domain RJ36_RS03405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS03405 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS03430 PF00563 EAL domain RJ36_RS03430 PF03707 Bacterial signalling protein N terminal repeat RJ36_RS03430 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS03435 PF00072 Response regulator receiver domain RJ36_RS03435 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS03445 PF09997 Predicted membrane protein (DUF2238) RJ36_RS03450 PF03466 LysR substrate binding domain RJ36_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS03455 PF00484 Carbonic anhydrase RJ36_RS03460 PF02560 Cyanate lyase C-terminal domain RJ36_RS03465 PF07690 Major Facilitator Superfamily RJ36_RS03495 PF04474 Protein of unknown function (DUF554) RJ36_RS03500 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RJ36_RS03500 PF01276 Orn/Lys/Arg decarboxylase, major domain RJ36_RS03500 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RJ36_RS03505 PF00072 Response regulator receiver domain RJ36_RS03505 PF12431 Transcriptional regulator RJ36_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS03510 PF17203 Single cache domain 3 RJ36_RS03515 PF03390 2-hydroxycarboxylate transporter family RJ36_RS03520 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS03525 PF08218 Citrate lyase ligase C-terminal domain RJ36_RS03525 PF00583 Acetyltransferase (GNAT) family RJ36_RS03530 PF06857 Malonate decarboxylase delta subunit (MdcD) RJ36_RS03535 PF03328 HpcH/HpaI aldolase/citrate lyase family RJ36_RS03540 PF04223 Citrate lyase, alpha subunit (CitF) RJ36_RS03545 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase RJ36_RS03550 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RJ36_RS03555 PF01464 Transglycosylase SLT domain RJ36_RS03555 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RJ36_RS03560 PF04362 Bacterial Fe(2+) trafficking RJ36_RS03565 PF10576 Iron-sulfur binding domain of endonuclease III RJ36_RS03565 PF00730 HhH-GPD superfamily base excision DNA repair protein RJ36_RS03565 PF00633 Helix-hairpin-helix motif RJ36_RS03565 PF14815 NUDIX domain RJ36_RS03570 PF02390 Putative methyltransferase RJ36_RS03575 PF04320 Protein with unknown function (DUF469) RJ36_RS03580 PF11101 Protein of unknown function (DUF2884) RJ36_RS03585 PF04480 Protein of unknown function (DUF559) RJ36_RS03590 PF06717 Protein of unknown function (DUF1202) RJ36_RS03595 PF17763 Glutaminase/Asparaginase C-terminal domain RJ36_RS03595 PF00710 Asparaginase, N-terminal RJ36_RS03600 PF04055 Radical SAM superfamily RJ36_RS03600 PF06969 HemN C-terminal domain RJ36_RS03605 PF01725 Ham1 family RJ36_RS03610 PF02594 Uncharacterised ACR, YggU family COG1872 RJ36_RS03615 PF02325 YGGT family RJ36_RS03620 PF01168 Alanine racemase, N-terminal domain RJ36_RS03625 PF00437 Type II/IV secretion system protein RJ36_RS03630 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS03635 PF03652 Holliday junction resolvase RJ36_RS03640 PF02622 Uncharacterized ACR, COG1678 RJ36_RS03645 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RJ36_RS03645 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RJ36_RS03650 PF04452 RNA methyltransferase RJ36_RS03655 PF04231 Endonuclease I RJ36_RS03660 PF17283 SprT-like zinc ribbon domain RJ36_RS03660 PF10263 SprT-like family RJ36_RS03665 PF00083 Sugar (and other) transporter RJ36_RS03670 PF02773 S-adenosylmethionine synthetase, C-terminal domain RJ36_RS03670 PF02772 S-adenosylmethionine synthetase, central domain RJ36_RS03670 PF00438 S-adenosylmethionine synthetase, N-terminal domain RJ36_RS03675 PF17810 Arginine decarboxylase helical bundle domain RJ36_RS03675 PF17944 Arginine decarboxylase C-terminal helical extension RJ36_RS03675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RJ36_RS03680 PF00491 Arginase family RJ36_RS03690 PF00355 Rieske [2Fe-2S] domain RJ36_RS03700 PF00355 Rieske [2Fe-2S] domain RJ36_RS03710 PF09339 IclR helix-turn-helix domain RJ36_RS03710 PF01614 Bacterial transcriptional regulator RJ36_RS03720 PF14759 Reductase C-terminal RJ36_RS03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS03725 PF07690 Major Facilitator Superfamily RJ36_RS03735 PF12697 Alpha/beta hydrolase family RJ36_RS03745 PF03447 Homoserine dehydrogenase, NAD binding domain RJ36_RS03745 PF01958 Domain of unknown function DUF108 RJ36_RS03750 PF00171 Aldehyde dehydrogenase family RJ36_RS03755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS03755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS03760 PF03573 outer membrane porin, OprD family RJ36_RS03765 PF01435 Peptidase family M48 RJ36_RS03770 PF02780 Transketolase, C-terminal domain RJ36_RS03770 PF02779 Transketolase, pyrimidine binding domain RJ36_RS03770 PF00456 Transketolase, thiamine diphosphate binding domain RJ36_RS03775 PF01797 Transposase IS200 like RJ36_RS03780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RJ36_RS03780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS03785 PF00162 Phosphoglycerate kinase RJ36_RS03790 PF01116 Fructose-bisphosphate aldolase class-II RJ36_RS03795 PF00696 Amino acid kinase family RJ36_RS03800 PF07690 Major Facilitator Superfamily RJ36_RS03805 PF02629 CoA binding domain RJ36_RS03805 PF00549 CoA-ligase RJ36_RS03810 PF06545 Protein of unknown function (DUF1116) RJ36_RS03815 PF11392 Protein of unknown function (DUF2877) RJ36_RS03820 PF03466 LysR substrate binding domain RJ36_RS03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS03825 PF05552 Conserved TM helix RJ36_RS03825 PF00924 Mechanosensitive ion channel RJ36_RS03830 PF01810 LysE type translocator RJ36_RS03835 PF04402 Protein of unknown function (DUF541) RJ36_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS03840 PF03466 LysR substrate binding domain RJ36_RS03845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RJ36_RS03850 PF01842 ACT domain RJ36_RS03850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RJ36_RS03850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RJ36_RS03855 PF01812 5-formyltetrahydrofolate cyclo-ligase family RJ36_RS03860 PF05164 Cell division protein ZapA RJ36_RS03865 PF03695 Uncharacterised protein family (UPF0149) RJ36_RS03870 PF05195 Aminopeptidase P, N-terminal domain RJ36_RS03870 PF00557 Metallopeptidase family M24 RJ36_RS03875 PF01494 FAD binding domain RJ36_RS03880 PF01494 FAD binding domain RJ36_RS03885 PF08669 Glycine cleavage T-protein C-terminal barrel domain RJ36_RS03885 PF01571 Aminomethyltransferase folate-binding domain RJ36_RS03890 PF01597 Glycine cleavage H-protein RJ36_RS03895 PF02347 Glycine cleavage system P-protein RJ36_RS03905 PF00232 Glycosyl hydrolase family 1 RJ36_RS03910 PF01418 Helix-turn-helix domain, rpiR family RJ36_RS03910 PF01380 SIS domain RJ36_RS03915 PF04266 ASCH domain RJ36_RS03920 PF03006 Haemolysin-III related RJ36_RS03930 PF01571 Aminomethyltransferase folate-binding domain RJ36_RS03935 PF03937 Flavinator of succinate dehydrogenase RJ36_RS03940 PF07254 Membrane-bound toxin component of toxin-antitoxin system RJ36_RS03945 PF00258 Flavodoxin RJ36_RS03950 PF00589 Phage integrase family RJ36_RS03950 PF02899 Phage integrase, N-terminal SAM-like domain RJ36_RS03955 PF13098 Thioredoxin-like domain RJ36_RS03955 PF10411 Disulfide bond isomerase protein N-terminus RJ36_RS03960 PF02272 DHHA1 domain RJ36_RS03960 PF17768 RecJ OB domain RJ36_RS03960 PF01368 DHH family RJ36_RS03965 PF00472 RF-1 domain RJ36_RS03965 PF03462 PCRF domain RJ36_RS03970 PF01336 OB-fold nucleic acid binding domain RJ36_RS03970 PF00152 tRNA synthetases class II (D, K and N) RJ36_RS03975 PF00293 NUDIX domain RJ36_RS03980 PF04474 Protein of unknown function (DUF554) RJ36_RS03985 PF02441 Flavoprotein RJ36_RS03990 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RJ36_RS03995 PF03466 LysR substrate binding domain RJ36_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS04000 PF01476 LysM domain RJ36_RS04000 PF01551 Peptidase family M23 RJ36_RS04010 PF13454 FAD-NAD(P)-binding RJ36_RS04015 PF00593 TonB dependent receptor RJ36_RS04015 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS04020 PF03466 LysR substrate binding domain RJ36_RS04025 PF07690 Major Facilitator Superfamily RJ36_RS04030 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RJ36_RS04040 PF01648 4'-phosphopantetheinyl transferase superfamily RJ36_RS04045 PF00109 Beta-ketoacyl synthase, N-terminal domain RJ36_RS04045 PF02801 Beta-ketoacyl synthase, C-terminal domain RJ36_RS04060 PF02801 Beta-ketoacyl synthase, C-terminal domain RJ36_RS04060 PF00109 Beta-ketoacyl synthase, N-terminal domain RJ36_RS04095 PF00501 AMP-binding enzyme RJ36_RS04095 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS04105 PF00550 Phosphopantetheine attachment site RJ36_RS04110 PF00550 Phosphopantetheine attachment site RJ36_RS04125 PF03222 Tryptophan/tyrosine permease family RJ36_RS04135 PF03466 LysR substrate binding domain RJ36_RS04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS04140 PF00108 Thiolase, N-terminal domain RJ36_RS04140 PF02803 Thiolase, C-terminal domain RJ36_RS04145 PF06178 Oligogalacturonate-specific porin protein (KdgM) RJ36_RS04150 PF14583 Oligogalacturonate lyase RJ36_RS04155 PF04962 KduI/IolB family RJ36_RS04165 PF00083 Sugar (and other) transporter RJ36_RS04170 PF14583 Oligogalacturonate lyase RJ36_RS04180 PF17912 MalK OB fold domain RJ36_RS04180 PF00005 ABC transporter RJ36_RS04180 PF03459 TOBE domain RJ36_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS04200 PF01177 Asp/Glu/Hydantoin racemase RJ36_RS04205 PF03466 LysR substrate binding domain RJ36_RS04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS04210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RJ36_RS04210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RJ36_RS04215 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS04235 PF05638 Type VI secretion system effector, Hcp RJ36_RS04250 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS04255 PF00501 AMP-binding enzyme RJ36_RS04255 PF01553 Acyltransferase RJ36_RS04260 PF07690 Major Facilitator Superfamily RJ36_RS04265 PF00248 Aldo/keto reductase family RJ36_RS04270 PF06004 Bacterial protein of unknown function (DUF903) RJ36_RS04275 PF03741 Integral membrane protein TerC family RJ36_RS04280 PF02976 DNA mismatch repair enzyme MutH RJ36_RS04290 PF00293 NUDIX domain RJ36_RS04295 PF01590 GAF domain RJ36_RS04295 PF05524 PEP-utilising enzyme, N-terminal RJ36_RS04295 PF00391 PEP-utilising enzyme, mobile domain RJ36_RS04295 PF02896 PEP-utilising enzyme, TIM barrel domain RJ36_RS04305 PF01790 Prolipoprotein diacylglyceryl transferase RJ36_RS04310 PF00303 Thymidylate synthase RJ36_RS04315 PF07963 Prokaryotic N-terminal methylation motif RJ36_RS04320 PF07963 Prokaryotic N-terminal methylation motif RJ36_RS04325 PF10713 Protein of unknown function (DUF2509) RJ36_RS04330 PF12528 Type II secretion prepilin peptidase dependent protein C RJ36_RS04330 PF07963 Prokaryotic N-terminal methylation motif RJ36_RS04335 PF17946 RecC C-terminal domain RJ36_RS04340 PF00675 Insulinase (Peptidase family M16) RJ36_RS04340 PF05193 Peptidase M16 inactive domain RJ36_RS04340 PF16187 Middle or third domain of peptidase_M16 RJ36_RS04345 PF13361 UvrD-like helicase C-terminal domain RJ36_RS04345 PF00580 UvrD/REP helicase N-terminal domain RJ36_RS04345 PF12705 PD-(D/E)XK nuclease superfamily RJ36_RS04350 PF13538 UvrD-like helicase C-terminal domain RJ36_RS04355 PF00696 Amino acid kinase family RJ36_RS04355 PF00583 Acetyltransferase (GNAT) family RJ36_RS04360 PF01520 N-acetylmuramoyl-L-alanine amidase RJ36_RS04360 PF11741 AMIN domain RJ36_RS04375 PF06725 3D domain RJ36_RS04375 PF03562 MltA specific insert domain RJ36_RS04380 PF00899 ThiF family RJ36_RS04385 PF02657 Fe-S metabolism associated domain RJ36_RS04390 PF00266 Aminotransferase class-V RJ36_RS04395 PF06004 Bacterial protein of unknown function (DUF903) RJ36_RS04400 PF03466 LysR substrate binding domain RJ36_RS04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS04405 PF04241 Protein of unknown function (DUF423) RJ36_RS04410 PF18125 RlmM ferredoxin-like domain RJ36_RS04410 PF01728 FtsJ-like methyltransferase RJ36_RS04415 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RJ36_RS04415 PF01367 5'-3' exonuclease, C-terminal SAM fold RJ36_RS04420 PF03313 Serine dehydratase alpha chain RJ36_RS04420 PF03315 Serine dehydratase beta chain RJ36_RS04430 PF03641 Possible lysine decarboxylase RJ36_RS04430 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases RJ36_RS04430 PF11892 Domain of unknown function (DUF3412) RJ36_RS04435 PF14489 QueF-like protein RJ36_RS04435 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RJ36_RS04440 PF07348 Syd protein (SUKH-2) RJ36_RS04445 PF04287 tRNA pseudouridine synthase C RJ36_RS04450 PF00849 RNA pseudouridylate synthase RJ36_RS04455 PF00258 Flavodoxin RJ36_RS04460 PF07690 Major Facilitator Superfamily RJ36_RS04465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RJ36_RS04465 PF13378 Enolase C-terminal domain-like RJ36_RS04470 PF13378 Enolase C-terminal domain-like RJ36_RS04475 PF02595 Glycerate kinase family RJ36_RS04480 PF01627 Hpt domain RJ36_RS04480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RJ36_RS04480 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS04480 PF00072 Response regulator receiver domain RJ36_RS04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS04480 PF00672 HAMP domain RJ36_RS04485 PF05958 tRNA (Uracil-5-)-methyltransferase RJ36_RS04485 PF01938 TRAM domain RJ36_RS04490 PF13291 ACT domain RJ36_RS04490 PF04607 Region found in RelA / SpoT proteins RJ36_RS04490 PF02824 TGS domain RJ36_RS04495 PF03819 MazG nucleotide pyrophosphohydrolase domain RJ36_RS04500 PF06418 CTP synthase N-terminus RJ36_RS04500 PF00117 Glutamine amidotransferase class-I RJ36_RS04505 PF03952 Enolase, N-terminal domain RJ36_RS04505 PF00113 Enolase, C-terminal TIM barrel domain RJ36_RS04510 PF04055 Radical SAM superfamily RJ36_RS04515 PF01242 6-pyruvoyl tetrahydropterin synthase RJ36_RS04520 PF00667 FAD binding domain RJ36_RS04520 PF00258 Flavodoxin RJ36_RS04520 PF00175 Oxidoreductase NAD-binding domain RJ36_RS04525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RJ36_RS04525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RJ36_RS04530 PF01507 Phosphoadenosine phosphosulfate reductase family RJ36_RS04540 PF04389 Peptidase family M28 RJ36_RS04545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS04545 PF14824 Sirohaem biosynthesis protein central RJ36_RS04545 PF10414 Sirohaem synthase dimerisation region RJ36_RS04550 PF01507 Phosphoadenosine phosphosulfate reductase family RJ36_RS04555 PF00009 Elongation factor Tu GTP binding domain RJ36_RS04565 PF12084 Protein of unknown function (DUF3561) RJ36_RS04570 PF04977 Septum formation initiator RJ36_RS04575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RJ36_RS04580 PF02542 YgbB family RJ36_RS04585 PF01142 tRNA pseudouridine synthase D (TruD) RJ36_RS04590 PF01975 Survival protein SurE RJ36_RS04600 PF01476 LysM domain RJ36_RS04600 PF01551 Peptidase family M23 RJ36_RS04605 PF04545 Sigma-70, region 4 RJ36_RS04605 PF00140 Sigma-70 factor, region 1.2 RJ36_RS04605 PF04542 Sigma-70 region 2 RJ36_RS04605 PF04539 Sigma-70 region 3 RJ36_RS04610 PF01047 MarR family RJ36_RS04615 PF02441 Flavoprotein RJ36_RS04620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RJ36_RS04630 PF00149 Calcineurin-like phosphoesterase RJ36_RS04640 PF00488 MutS domain V RJ36_RS04640 PF05192 MutS domain III RJ36_RS04640 PF05190 MutS family domain IV RJ36_RS04640 PF01624 MutS domain I RJ36_RS04640 PF05188 MutS domain II RJ36_RS04645 PF11756 Nitrous oxide-stimulated promoter RJ36_RS04650 PF04055 Radical SAM superfamily RJ36_RS04655 PF02901 Pyruvate formate lyase-like RJ36_RS04655 PF01228 Glycine radical RJ36_RS04660 PF00158 Sigma-54 interaction domain RJ36_RS04660 PF02954 Bacterial regulatory protein, Fis family RJ36_RS04660 PF01590 GAF domain RJ36_RS04665 PF00586 AIR synthase related protein, N-terminal domain RJ36_RS04665 PF02769 AIR synthase related protein, C-terminal domain RJ36_RS04670 PF01924 Hydrogenase formation hypA family RJ36_RS04675 PF01455 HupF/HypC family RJ36_RS04680 PF02492 CobW/HypB/UreG, nucleotide-binding domain RJ36_RS04685 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RJ36_RS04690 PF11046 Transcriptional repressor of hyc and hyp operons RJ36_RS04695 PF13247 4Fe-4S dicluster domain RJ36_RS04700 PF00361 Proton-conducting membrane transporter RJ36_RS04705 PF00146 NADH dehydrogenase RJ36_RS04710 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RJ36_RS04710 PF00374 Nickel-dependent hydrogenase RJ36_RS04710 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RJ36_RS04715 PF12838 4Fe-4S dicluster domain RJ36_RS04720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RJ36_RS04725 PF07450 Formate hydrogenlyase maturation protein HycH RJ36_RS04730 PF01750 Hydrogenase maturation protease RJ36_RS04745 PF00232 Glycosyl hydrolase family 1 RJ36_RS04750 PF02378 Phosphotransferase system, EIIC RJ36_RS04750 PF00367 phosphotransferase system, EIIB RJ36_RS04755 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS04760 PF13247 4Fe-4S dicluster domain RJ36_RS04760 PF12800 4Fe-4S binding domain RJ36_RS04765 PF00384 Molybdopterin oxidoreductase RJ36_RS04765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS04765 PF01568 Molydopterin dinucleotide binding domain RJ36_RS04770 PF00708 Acylphosphatase RJ36_RS04770 PF17788 HypF Kae1-like domain RJ36_RS04770 PF01300 Telomere recombination RJ36_RS04770 PF07503 HypF finger RJ36_RS04775 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS04775 PF18113 Rubredoxin binding C-terminal domain RJ36_RS04780 PF00301 Rubredoxin RJ36_RS04780 PF00753 Metallo-beta-lactamase superfamily RJ36_RS04780 PF00258 Flavodoxin RJ36_RS04785 PF00158 Sigma-54 interaction domain RJ36_RS04785 PF01590 GAF domain RJ36_RS04790 PF01380 SIS domain RJ36_RS04790 PF00571 CBS domain RJ36_RS04795 PF13406 Transglycosylase SLT domain RJ36_RS04800 PF00005 ABC transporter RJ36_RS04805 PF00950 ABC 3 transport family RJ36_RS04810 PF01297 Zinc-uptake complex component A periplasmic RJ36_RS04820 PF02464 Competence-damaged protein RJ36_RS04825 PF00154 recA bacterial DNA recombination protein RJ36_RS04830 PF02631 RecX family RJ36_RS04835 PF01411 tRNA synthetases class II (A) RJ36_RS04835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RJ36_RS04835 PF02272 DHHA1 domain RJ36_RS04840 PF02599 Global regulator protein family RJ36_RS04870 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS04875 PF09335 SNARE associated Golgi protein RJ36_RS04880 PF04262 Glutamate-cysteine ligase RJ36_RS04885 PF02664 S-Ribosylhomocysteinase (LuxS) RJ36_RS04890 PF07690 Major Facilitator Superfamily RJ36_RS04895 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS04895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS04900 PF01047 MarR family RJ36_RS04905 PF07690 Major Facilitator Superfamily RJ36_RS04910 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RJ36_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS04920 PF00005 ABC transporter RJ36_RS04920 PF00571 CBS domain RJ36_RS04925 PF00268 Ribonucleotide reductase, small chain RJ36_RS04930 PF02867 Ribonucleotide reductase, barrel domain RJ36_RS04930 PF00317 Ribonucleotide reductase, all-alpha domain RJ36_RS04930 PF08343 Ribonucleotide reductase N-terminal RJ36_RS04935 PF07972 NrdI Flavodoxin like RJ36_RS04940 PF00462 Glutaredoxin RJ36_RS04945 PF02627 Carboxymuconolactone decarboxylase family RJ36_RS04950 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS04950 PF00155 Aminotransferase class I and II RJ36_RS04955 PF05957 Bacterial protein of unknown function (DUF883) RJ36_RS04960 PF09400 Protein of unknown function (DUF2002) RJ36_RS04965 PF06610 L-alanine exporter RJ36_RS04970 PF00816 H-NS histone family RJ36_RS04980 PF11127 Protein of unknown function (DUF2892) RJ36_RS04980 PF00581 Rhodanese-like domain RJ36_RS04990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS04990 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS04995 PF13953 PapC C-terminal domain RJ36_RS04995 PF13954 PapC N-terminal domain RJ36_RS04995 PF00577 Outer membrane usher protein RJ36_RS05010 PF03466 LysR substrate binding domain RJ36_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS05015 PF02525 Flavodoxin-like fold RJ36_RS05020 PF13693 Winged helix-turn-helix DNA-binding RJ36_RS05035 PF00293 NUDIX domain RJ36_RS05040 PF03641 Possible lysine decarboxylase RJ36_RS05045 PF13718 GNAT acetyltransferase 2 RJ36_RS05045 PF05127 Helicase RJ36_RS05045 PF17176 tRNA-binding domain RJ36_RS05070 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS05070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS05075 PF03412 Peptidase C39 family RJ36_RS05075 PF00664 ABC transporter transmembrane region RJ36_RS05075 PF00005 ABC transporter RJ36_RS05090 PF01668 SmpB protein RJ36_RS05095 PF03364 Polyketide cyclase / dehydrase and lipid transport RJ36_RS05100 PF03658 RnfH family Ubiquitin RJ36_RS05105 PF04355 SmpA / OmlA family RJ36_RS05110 PF02463 RecF/RecN/SMC N terminal domain RJ36_RS05115 PF01513 ATP-NAD kinase RJ36_RS05120 PF01025 GrpE RJ36_RS05125 PF00563 EAL domain RJ36_RS05125 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS05125 PF13426 PAS domain RJ36_RS05130 PF00571 CBS domain RJ36_RS05130 PF01595 Cyclin M transmembrane N-terminal domain RJ36_RS05130 PF03471 Transporter associated domain RJ36_RS05135 PF01578 Cytochrome C assembly protein RJ36_RS05140 PF00448 SRP54-type protein, GTPase domain RJ36_RS05140 PF02978 Signal peptide binding domain RJ36_RS05140 PF02881 SRP54-type protein, helical bundle domain RJ36_RS05145 PF00886 Ribosomal protein S16 RJ36_RS05150 PF01782 RimM N-terminal domain RJ36_RS05150 PF05239 PRC-barrel domain RJ36_RS05155 PF01746 tRNA (Guanine-1)-methyltransferase RJ36_RS05160 PF01245 Ribosomal protein L19 RJ36_RS05175 PF00691 OmpA family RJ36_RS05180 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS05180 PF17152 Periplasmic sensor domain RJ36_RS05185 PF13689 YfiR/HmsC-like RJ36_RS05190 PF00793 DAHP synthetase I family RJ36_RS05195 PF01817 Chorismate mutase type II RJ36_RS05195 PF02153 Prephenate dehydrogenase RJ36_RS05200 PF08450 SMP-30/Gluconolactonase/LRE-like region RJ36_RS05205 PF01817 Chorismate mutase type II RJ36_RS05205 PF00800 Prephenate dehydratase RJ36_RS05210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RJ36_RS05215 PF13525 Outer membrane lipoprotein RJ36_RS05220 PF00849 RNA pseudouridylate synthase RJ36_RS05220 PF01479 S4 domain RJ36_RS05225 PF02578 Multi-copper polyphenol oxidoreductase laccase RJ36_RS05230 PF02861 Clp amino terminal domain, pathogenicity island component RJ36_RS05230 PF10431 C-terminal, D2-small domain, of ClpB protein RJ36_RS05230 PF07724 AAA domain (Cdc48 subfamily) RJ36_RS05230 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS05230 PF17871 AAA lid domain RJ36_RS05255 PF00083 Sugar (and other) transporter RJ36_RS05260 PF10043 Predicted periplasmic lipoprotein (DUF2279) RJ36_RS05265 PF13091 PLD-like domain RJ36_RS05270 PF13380 CoA binding domain RJ36_RS05270 PF13607 Succinyl-CoA ligase like flavodoxin domain RJ36_RS05270 PF00583 Acetyltransferase (GNAT) family RJ36_RS05275 PF03942 DTW domain RJ36_RS05280 PF00085 Thioredoxin RJ36_RS05285 PF08032 RNA 2'-O ribose methyltransferase substrate binding RJ36_RS05285 PF00588 SpoU rRNA Methylase family RJ36_RS05290 PF03167 Uracil DNA glycosylase superfamily RJ36_RS05295 PF01228 Glycine radical RJ36_RS05300 PF00271 Helicase conserved C-terminal domain RJ36_RS05300 PF00270 DEAD/DEAH box helicase RJ36_RS05305 PF05175 Methyltransferase small domain RJ36_RS05310 PF02910 Fumarate reductase flavoprotein C-term RJ36_RS05310 PF00890 FAD binding domain RJ36_RS05315 PF04542 Sigma-70 region 2 RJ36_RS05315 PF08281 Sigma-70, region 4 RJ36_RS05320 PF03873 Anti sigma-E protein RseA, C-terminal domain RJ36_RS05320 PF03872 Anti sigma-E protein RseA, N-terminal domain RJ36_RS05325 PF17188 MucB/RseB C-terminal domain RJ36_RS05325 PF03888 MucB/RseB N-terminal domain RJ36_RS05335 PF00679 Elongation factor G C-terminus RJ36_RS05335 PF06421 GTP-binding protein LepA C-terminus RJ36_RS05335 PF00009 Elongation factor Tu GTP binding domain RJ36_RS05335 PF03144 Elongation factor Tu domain 2 RJ36_RS05340 PF10502 Signal peptidase, peptidase S26 RJ36_RS05345 PF00035 Double-stranded RNA binding motif RJ36_RS05345 PF14622 Ribonuclease-III-like RJ36_RS05350 PF01926 50S ribosome-binding GTPase RJ36_RS05350 PF07650 KH domain RJ36_RS05355 PF02565 Recombination protein O C terminal RJ36_RS05355 PF11967 Recombination protein O N terminal RJ36_RS05360 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RJ36_RS05365 PF01648 4'-phosphopantetheinyl transferase superfamily RJ36_RS05370 PF12838 4Fe-4S dicluster domain RJ36_RS05375 PF01380 SIS domain RJ36_RS05375 PF01418 Helix-turn-helix domain, rpiR family RJ36_RS05385 PF14437 MafB19-like deaminase RJ36_RS05390 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS05390 PF01464 Transglycosylase SLT domain RJ36_RS05395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RJ36_RS05395 PF02769 AIR synthase related protein, C-terminal domain RJ36_RS05395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RJ36_RS05400 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS05405 PF13942 YfhG lipoprotein RJ36_RS05410 PF00072 Response regulator receiver domain RJ36_RS05410 PF00158 Sigma-54 interaction domain RJ36_RS05415 PF00543 Nitrogen regulatory protein P-II RJ36_RS05420 PF00970 Oxidoreductase FAD-binding domain RJ36_RS05420 PF00175 Oxidoreductase NAD-binding domain RJ36_RS05420 PF00042 Globin RJ36_RS05425 PF00464 Serine hydroxymethyltransferase RJ36_RS05430 PF07681 DoxX RJ36_RS05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS05435 PF14759 Reductase C-terminal RJ36_RS05440 PF00106 short chain dehydrogenase RJ36_RS05445 PF00355 Rieske [2Fe-2S] domain RJ36_RS05450 PF00866 Ring hydroxylating beta subunit RJ36_RS05455 PF00355 Rieske [2Fe-2S] domain RJ36_RS05455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RJ36_RS05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS05460 PF03466 LysR substrate binding domain RJ36_RS05465 PF12832 MFS_1 like family RJ36_RS05470 PF00874 PRD domain RJ36_RS05480 PF03824 High-affinity nickel-transport protein RJ36_RS05485 PF12146 Serine aminopeptidase, S33 RJ36_RS05490 PF00459 Inositol monophosphatase family RJ36_RS05495 PF00588 SpoU rRNA Methylase family RJ36_RS05500 PF02082 Transcriptional regulator RJ36_RS05505 PF00266 Aminotransferase class-V RJ36_RS05510 PF01592 NifU-like N terminal domain RJ36_RS05515 PF01521 Iron-sulphur cluster biosynthesis RJ36_RS05520 PF07743 HSCB C-terminal oligomerisation domain RJ36_RS05525 PF00012 Hsp70 protein RJ36_RS05530 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS05535 PF04384 Iron-sulphur cluster assembly RJ36_RS05540 PF12404 Peptidase RJ36_RS05540 PF00883 Cytosol aminopeptidase family, catalytic domain RJ36_RS05545 PF07179 SseB protein N-terminal domain RJ36_RS05545 PF14581 SseB protein C-terminal domain RJ36_RS05550 PF00581 Rhodanese-like domain RJ36_RS05555 PF00207 Alpha-2-macroglobulin family RJ36_RS05555 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RJ36_RS05555 PF07703 Alpha-2-macroglobulin bait region domain RJ36_RS05555 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RJ36_RS05555 PF17962 Bacterial macroglobulin domain 6 RJ36_RS05555 PF01835 MG2 domain RJ36_RS05555 PF07678 A-macroglobulin TED domain RJ36_RS05555 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RJ36_RS05555 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RJ36_RS05560 PF00912 Transglycosylase RJ36_RS05560 PF06832 Penicillin-Binding Protein C-terminus Family RJ36_RS05560 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS05565 PF00334 Nucleoside diphosphate kinase RJ36_RS05570 PF04055 Radical SAM superfamily RJ36_RS05575 PF13464 Domain of unknown function (DUF4115) RJ36_RS05580 PF04551 GcpE protein RJ36_RS05585 PF03129 Anticodon binding domain RJ36_RS05585 PF13393 Histidyl-tRNA synthetase RJ36_RS05590 PF09976 Tetratricopeptide repeat-like domain RJ36_RS05595 PF13360 PQQ-like domain RJ36_RS05600 PF01926 50S ribosome-binding GTPase RJ36_RS05600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RJ36_RS05605 PF07191 zinc-ribbons RJ36_RS05610 PF13742 OB-fold nucleic acid binding domain RJ36_RS05610 PF02601 Exonuclease VII, large subunit RJ36_RS05615 PF00571 CBS domain RJ36_RS05615 PF00478 IMP dehydrogenase / GMP reductase domain RJ36_RS05620 PF02540 NAD synthase RJ36_RS05620 PF00958 GMP synthase C terminal domain RJ36_RS05620 PF00117 Glutamine amidotransferase class-I RJ36_RS05630 PF09382 RQC domain RJ36_RS05630 PF16124 RecQ zinc-binding RJ36_RS05630 PF00270 DEAD/DEAH box helicase RJ36_RS05630 PF00271 Helicase conserved C-terminal domain RJ36_RS05630 PF00570 HRDC domain RJ36_RS05635 PF00563 EAL domain RJ36_RS05635 PF05231 MASE1 RJ36_RS05640 PF02541 Ppx/GppA phosphatase family RJ36_RS05645 PF02503 Polyphosphate kinase middle domain RJ36_RS05645 PF17941 Polyphosphate kinase C-terminal domain 1 RJ36_RS05645 PF13090 Polyphosphate kinase C-terminal domain 2 RJ36_RS05645 PF13089 Polyphosphate kinase N-terminal domain RJ36_RS05655 PF00551 Formyl transferase RJ36_RS05660 PF02769 AIR synthase related protein, C-terminal domain RJ36_RS05660 PF00586 AIR synthase related protein, N-terminal domain RJ36_RS05665 PF00480 ROK family RJ36_RS05670 PF00232 Glycosyl hydrolase family 1 RJ36_RS05680 PF00860 Permease family RJ36_RS05685 PF00308 Bacterial dnaA protein RJ36_RS05690 PF04754 Putative transposase, YhgA-like RJ36_RS05695 PF03960 ArsC family RJ36_RS05700 PF01435 Peptidase family M48 RJ36_RS05705 PF01594 AI-2E family transporter RJ36_RS05710 PF00578 AhpC/TSA family RJ36_RS05715 PF01842 ACT domain RJ36_RS05720 PF00701 Dihydrodipicolinate synthetase family RJ36_RS05725 PF06804 NlpB/DapX lipoprotein RJ36_RS05730 PF01259 SAICAR synthetase RJ36_RS05735 PF04228 Putative neutral zinc metallopeptidase RJ36_RS05740 PF05127 Helicase RJ36_RS05740 PF17176 tRNA-binding domain RJ36_RS05740 PF13718 GNAT acetyltransferase 2 RJ36_RS05740 PF08351 Domain of unknown function (DUF1726) RJ36_RS05745 PF02230 Phospholipase/Carboxylesterase RJ36_RS05750 PF13980 Uncharacterised protein family (UPF0370) RJ36_RS05755 PF07687 Peptidase dimerisation domain RJ36_RS05755 PF01546 Peptidase family M20/M25/M40 RJ36_RS05760 PF03960 ArsC family RJ36_RS05765 PF00873 AcrB/AcrD/AcrF family RJ36_RS05770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RJ36_RS05770 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS05770 PF13247 4Fe-4S dicluster domain RJ36_RS05775 PF00293 NUDIX domain RJ36_RS05780 PF06674 Protein of unknown function (DUF1176) RJ36_RS05785 PF00456 Transketolase, thiamine diphosphate binding domain RJ36_RS05785 PF02780 Transketolase, C-terminal domain RJ36_RS05785 PF02779 Transketolase, pyrimidine binding domain RJ36_RS05790 PF00390 Malic enzyme, N-terminal domain RJ36_RS05790 PF01515 Phosphate acetyl/butaryl transferase RJ36_RS05790 PF03949 Malic enzyme, NAD binding domain RJ36_RS05795 PF00936 BMC domain RJ36_RS05800 PF10662 Ethanolamine utilisation - propanediol utilisation RJ36_RS05805 PF06249 Ethanolamine utilisation protein EutQ RJ36_RS05810 PF01923 Cobalamin adenosyltransferase RJ36_RS05815 PF01515 Phosphate acetyl/butaryl transferase RJ36_RS05820 PF00936 BMC domain RJ36_RS05825 PF03319 Ethanolamine utilisation protein EutN/carboxysome RJ36_RS05830 PF00171 Aldehyde dehydrogenase family RJ36_RS05840 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS05845 PF04346 Ethanolamine utilisation protein, EutH RJ36_RS05850 PF06277 Ethanolamine utilisation protein EutA RJ36_RS05855 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RJ36_RS05860 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RJ36_RS05865 PF00936 BMC domain RJ36_RS05870 PF16365 Ethanolamine utilization protein EutK C-terminus RJ36_RS05870 PF00936 BMC domain RJ36_RS05875 PF12833 Helix-turn-helix domain RJ36_RS05880 PF01218 Coproporphyrinogen III oxidase RJ36_RS05885 PF01520 N-acetylmuramoyl-L-alanine amidase RJ36_RS05890 PF00583 Acetyltransferase (GNAT) family RJ36_RS05895 PF11143 Protein of unknown function (DUF2919) RJ36_RS05900 PF06572 Protein of unknown function (DUF1131) RJ36_RS05905 PF04261 Dyp-type peroxidase family RJ36_RS05920 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS05925 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS05930 PF00005 ABC transporter RJ36_RS05935 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS05940 PF13474 SnoaL-like domain RJ36_RS05945 PF08543 Phosphomethylpyrimidine kinase RJ36_RS05950 PF12792 CSS motif domain associated with EAL RJ36_RS05950 PF00563 EAL domain RJ36_RS05955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RJ36_RS05960 PF05524 PEP-utilising enzyme, N-terminal RJ36_RS05960 PF00391 PEP-utilising enzyme, mobile domain RJ36_RS05960 PF02896 PEP-utilising enzyme, TIM barrel domain RJ36_RS05965 PF00381 PTS HPr component phosphorylation site RJ36_RS05970 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS05980 PF04354 ZipA, C-terminal FtsZ-binding domain RJ36_RS05985 PF00533 BRCA1 C Terminus (BRCT) domain RJ36_RS05985 PF03120 NAD-dependent DNA ligase OB-fold domain RJ36_RS05985 PF01653 NAD-dependent DNA ligase adenylation domain RJ36_RS05985 PF12826 Helix-hairpin-helix motif RJ36_RS05985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RJ36_RS05990 PF12843 Putative quorum-sensing-regulated virulence factor RJ36_RS05995 PF13593 SBF-like CPA transporter family (DUF4137) RJ36_RS06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS06000 PF03466 LysR substrate binding domain RJ36_RS06005 PF03502 Nucleoside-specific channel-forming protein, Tsx RJ36_RS06010 PF01048 Phosphorylase superfamily RJ36_RS06015 PF03825 Nucleoside H+ symporter RJ36_RS06020 PF03466 LysR substrate binding domain RJ36_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS06045 PF00749 tRNA synthetases class I (E and Q), catalytic domain RJ36_RS06050 PF07037 Putative transcription regulator (DUF1323) RJ36_RS06055 PF07037 Putative transcription regulator (DUF1323) RJ36_RS06070 PF05231 MASE1 RJ36_RS06070 PF00563 EAL domain RJ36_RS06075 PF07662 Na+ dependent nucleoside transporter C-terminus RJ36_RS06075 PF07670 Nucleoside recognition RJ36_RS06075 PF01773 Na+ dependent nucleoside transporter N-terminus RJ36_RS06080 PF01566 Natural resistance-associated macrophage protein RJ36_RS06090 PF00248 Aldo/keto reductase family RJ36_RS06095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS06095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS06095 PF00205 Thiamine pyrophosphate enzyme, central domain RJ36_RS06100 PF00654 Voltage gated chloride channel RJ36_RS06105 PF02685 Glucokinase RJ36_RS06110 PF02378 Phosphotransferase system, EIIC RJ36_RS06115 PF00072 Response regulator receiver domain RJ36_RS06115 PF04397 LytTr DNA-binding domain RJ36_RS06120 PF06580 Histidine kinase RJ36_RS06120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS06120 PF07694 5TMR of 5TMR-LYT RJ36_RS06125 PF00155 Aminotransferase class I and II RJ36_RS06130 PF01979 Amidohydrolase family RJ36_RS06135 PF07670 Nucleoside recognition RJ36_RS06140 PF07670 Nucleoside recognition RJ36_RS06155 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS06170 PF01042 Endoribonuclease L-PSP RJ36_RS06185 PF01494 FAD binding domain RJ36_RS06205 PF00561 alpha/beta hydrolase fold RJ36_RS06210 PF00072 Response regulator receiver domain RJ36_RS06210 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS06215 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS06215 PF00672 HAMP domain RJ36_RS06220 PF02683 Cytochrome C biogenesis protein transmembrane region RJ36_RS06220 PF00578 AhpC/TSA family RJ36_RS06220 PF17991 Thioredoxin like C-terminal domain RJ36_RS06230 PF14542 GCN5-related N-acetyl-transferase RJ36_RS06235 PF06902 Divergent 4Fe-4S mono-cluster RJ36_RS06245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RJ36_RS06250 PF00535 Glycosyl transferase family 2 RJ36_RS06255 PF02911 Formyl transferase, C-terminal domain RJ36_RS06255 PF00551 Formyl transferase RJ36_RS06255 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS06260 PF01522 Polysaccharide deacetylase RJ36_RS06265 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RJ36_RS06270 PF00892 EamA-like transporter family RJ36_RS06280 PF07690 Major Facilitator Superfamily RJ36_RS06290 PF01425 Amidase RJ36_RS06295 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RJ36_RS06310 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RJ36_RS06310 PF00355 Rieske [2Fe-2S] domain RJ36_RS06325 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS06330 PF01613 Flavin reductase like domain RJ36_RS06335 PF00083 Sugar (and other) transporter RJ36_RS06340 PF00775 Dioxygenase RJ36_RS06340 PF04444 Catechol dioxygenase N terminus RJ36_RS06350 PF01011 PQQ enzyme repeat RJ36_RS06350 PF13360 PQQ-like domain RJ36_RS06355 PF07690 Major Facilitator Superfamily RJ36_RS06365 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS06365 PF00672 HAMP domain RJ36_RS06370 PF02954 Bacterial regulatory protein, Fis family RJ36_RS06370 PF14532 Sigma-54 interaction domain RJ36_RS06370 PF00072 Response regulator receiver domain RJ36_RS06380 PF01226 Formate/nitrite transporter RJ36_RS06385 PF04333 MlaA lipoprotein RJ36_RS06390 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RJ36_RS06395 PF04175 Protein of unknown function (DUF406) RJ36_RS06400 PF00108 Thiolase, N-terminal domain RJ36_RS06400 PF02803 Thiolase, C-terminal domain RJ36_RS06405 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS06405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RJ36_RS06405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RJ36_RS06410 PF00300 Histidine phosphatase superfamily (branch 1) RJ36_RS06415 PF01713 Smr domain RJ36_RS06420 PF05175 Methyltransferase small domain RJ36_RS06425 PF01264 Chorismate synthase RJ36_RS06430 PF03411 Penicillin-insensitive murein endopeptidase RJ36_RS06435 PF01925 Sulfite exporter TauE/SafE RJ36_RS06440 PF04315 Elongation factor P hydroxylase RJ36_RS06445 PF08891 YfcL protein RJ36_RS06450 PF00665 Integrase core domain RJ36_RS06455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RJ36_RS06455 PF01266 FAD dependent oxidoreductase RJ36_RS06460 PF00109 Beta-ketoacyl synthase, N-terminal domain RJ36_RS06460 PF02801 Beta-ketoacyl synthase, C-terminal domain RJ36_RS06465 PF02517 CPBP intramembrane metalloprotease RJ36_RS06470 PF07690 Major Facilitator Superfamily RJ36_RS06475 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS06475 PF07702 UTRA domain RJ36_RS06480 PF02378 Phosphotransferase system, EIIC RJ36_RS06490 PF11890 Domain of unknown function (DUF3410) RJ36_RS06490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RJ36_RS06490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RJ36_RS06495 PF02774 Semialdehyde dehydrogenase, dimerisation domain RJ36_RS06495 PF01118 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS06500 PF01416 tRNA pseudouridine synthase RJ36_RS06505 PF09335 SNARE associated Golgi protein RJ36_RS06510 PF17848 Acetyl-coA carboxylase zinc finger domain RJ36_RS06510 PF01039 Carboxyl transferase domain RJ36_RS06515 PF08245 Mur ligase middle domain RJ36_RS06515 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS06520 PF05036 Sporulation related domain RJ36_RS06525 PF02674 Colicin V production protein RJ36_RS06530 PF00156 Phosphoribosyl transferase domain RJ36_RS06535 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RJ36_RS06535 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RJ36_RS06540 PF13247 4Fe-4S dicluster domain RJ36_RS06545 PF03916 Polysulphide reductase, NrfD RJ36_RS06550 PF00374 Nickel-dependent hydrogenase RJ36_RS06555 PF01750 Hydrogenase maturation protease RJ36_RS06560 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE RJ36_RS06565 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RJ36_RS06570 PF01455 HupF/HypC family RJ36_RS06575 PF02441 Flavoprotein RJ36_RS06580 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS06585 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS06590 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS06600 PF00005 ABC transporter RJ36_RS06605 PF13302 Acetyltransferase (GNAT) domain RJ36_RS06610 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS06610 PF08338 Domain of unknown function (DUF1731) RJ36_RS06615 PF02152 Dihydroneopterin aldolase RJ36_RS06620 PF00043 Glutathione S-transferase, C-terminal domain RJ36_RS06620 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS06625 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS06625 PF14834 Glutathione S-transferase, C-terminal domain RJ36_RS06630 PF12850 Calcineurin-like phosphoesterase superfamily domain RJ36_RS06635 PF00293 NUDIX domain RJ36_RS06640 PF01515 Phosphate acetyl/butaryl transferase RJ36_RS06640 PF07085 DRTGG domain RJ36_RS06645 PF00871 Acetokinase family RJ36_RS06650 PF04217 Protein of unknown function, DUF412 RJ36_RS06655 PF03887 YfbU domain RJ36_RS06660 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS06665 PF03600 Citrate transporter RJ36_RS06665 PF02080 TrkA-C domain RJ36_RS06675 PF00155 Aminotransferase class I and II RJ36_RS06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS06680 PF03466 LysR substrate binding domain RJ36_RS06685 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RJ36_RS06690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RJ36_RS06695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RJ36_RS06695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RJ36_RS06705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RJ36_RS06705 PF10531 SLBB domain RJ36_RS06705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RJ36_RS06710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RJ36_RS06710 PF01568 Molydopterin dinucleotide binding domain RJ36_RS06710 PF00384 Molybdopterin oxidoreductase RJ36_RS06710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS06715 PF00146 NADH dehydrogenase RJ36_RS06720 PF12838 4Fe-4S dicluster domain RJ36_RS06725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RJ36_RS06730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RJ36_RS06735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RJ36_RS06735 PF00361 Proton-conducting membrane transporter RJ36_RS06740 PF00361 Proton-conducting membrane transporter RJ36_RS06745 PF00361 Proton-conducting membrane transporter RJ36_RS06750 PF12706 Beta-lactamase superfamily domain RJ36_RS06755 PF13673 Acetyltransferase (GNAT) domain RJ36_RS06760 PF05957 Bacterial protein of unknown function (DUF883) RJ36_RS06765 PF00425 chorismate binding enzyme RJ36_RS06770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS06770 PF16582 Middle domain of thiamine pyrophosphate RJ36_RS06770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS06775 PF12697 Alpha/beta hydrolase family RJ36_RS06780 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS06785 PF13378 Enolase C-terminal domain-like RJ36_RS06790 PF00501 AMP-binding enzyme RJ36_RS06790 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS06795 PF07437 YfaZ precursor RJ36_RS06800 PF00994 Probable molybdopterin binding domain RJ36_RS06810 PF02754 Cysteine-rich domain RJ36_RS06810 PF13183 4Fe-4S dicluster domain RJ36_RS06815 PF00890 FAD binding domain RJ36_RS06820 PF01266 FAD dependent oxidoreductase RJ36_RS06820 PF04324 BFD-like [2Fe-2S] binding domain RJ36_RS06825 PF03466 LysR substrate binding domain RJ36_RS06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS06830 PF07690 Major Facilitator Superfamily RJ36_RS06840 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS06845 PF00268 Ribonucleotide reductase, small chain RJ36_RS06850 PF02867 Ribonucleotide reductase, barrel domain RJ36_RS06850 PF00317 Ribonucleotide reductase, all-alpha domain RJ36_RS06850 PF03477 ATP cone domain RJ36_RS06855 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat RJ36_RS06855 PF03797 Autotransporter beta-domain RJ36_RS06855 PF12951 Passenger-associated-transport-repeat RJ36_RS06865 PF00521 DNA gyrase/topoisomerase IV, subunit A RJ36_RS06865 PF03989 DNA gyrase C-terminal domain, beta-propeller RJ36_RS06870 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS06870 PF00072 Response regulator receiver domain RJ36_RS06870 PF09456 RcsC Alpha-Beta-Loop (ABL) RJ36_RS06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS06875 PF00072 Response regulator receiver domain RJ36_RS06875 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS06880 PF16359 RcsD-ABL domain RJ36_RS06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS06880 PF01627 Hpt domain RJ36_RS06885 PF00267 Gram-negative porin RJ36_RS06890 PF02424 ApbE family RJ36_RS06895 PF12833 Helix-turn-helix domain RJ36_RS06895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RJ36_RS06895 PF02805 Metal binding domain of Ada RJ36_RS06895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RJ36_RS06900 PF13532 2OG-Fe(II) oxygenase superfamily RJ36_RS06905 PF00005 ABC transporter RJ36_RS06910 PF03448 MgtE intracellular N domain RJ36_RS06910 PF01769 Divalent cation transporter RJ36_RS06910 PF00571 CBS domain RJ36_RS06915 PF01740 STAS domain RJ36_RS06915 PF00916 Sulfate permease family RJ36_RS06920 PF06039 Malate:quinone oxidoreductase (Mqo) RJ36_RS06925 PF03974 Ecotin RJ36_RS06930 PF00455 DeoR C terminal sensor domain RJ36_RS06930 PF08220 DeoR-like helix-turn-helix domain RJ36_RS06935 PF00293 NUDIX domain RJ36_RS06940 PF12833 Helix-turn-helix domain RJ36_RS06940 PF02311 AraC-like ligand binding domain RJ36_RS06945 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS06945 PF00175 Oxidoreductase NAD-binding domain RJ36_RS06945 PF00970 Oxidoreductase FAD-binding domain RJ36_RS06955 PF00884 Sulfatase RJ36_RS06955 PF11893 Domain of unknown function (DUF3413) RJ36_RS06960 PF07208 Protein of unknown function (DUF1414) RJ36_RS06965 PF04245 37-kD nucleoid-associated bacterial protein RJ36_RS06970 PF01386 Ribosomal L25p family RJ36_RS06975 PF00271 Helicase conserved C-terminal domain RJ36_RS06975 PF04851 Type III restriction enzyme, res subunit RJ36_RS06980 PF00849 RNA pseudouridylate synthase RJ36_RS06980 PF01479 S4 domain RJ36_RS06985 PF07690 Major Facilitator Superfamily RJ36_RS06990 PF13989 YejG-like protein RJ36_RS06995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS06995 PF00005 ABC transporter RJ36_RS07000 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07000 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS07005 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS07015 PF12792 CSS motif domain associated with EAL RJ36_RS07015 PF00563 EAL domain RJ36_RS07020 PF00877 NlpC/P60 family RJ36_RS07025 PF01569 PAP2 superfamily RJ36_RS07030 PF07683 Cobalamin synthesis protein cobW C-terminal domain RJ36_RS07030 PF02492 CobW/HypB/UreG, nucleotide-binding domain RJ36_RS07035 PF01232 Mannitol dehydrogenase Rossmann domain RJ36_RS07035 PF08125 Mannitol dehydrogenase C-terminal domain RJ36_RS07040 PF03786 D-mannonate dehydratase (UxuA) RJ36_RS07045 PF01132 Elongation factor P (EF-P) OB domain RJ36_RS07045 PF08207 Elongation factor P (EF-P) KOW-like domain RJ36_RS07045 PF09285 Elongation factor P, C-terminal RJ36_RS07050 PF07690 Major Facilitator Superfamily RJ36_RS07055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS07055 PF00381 PTS HPr component phosphorylation site RJ36_RS07060 PF00294 pfkB family carbohydrate kinase RJ36_RS07065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS07065 PF02378 Phosphotransferase system, EIIC RJ36_RS07070 PF01261 Xylose isomerase-like TIM barrel RJ36_RS07075 PF03601 Conserved hypothetical protein 698 RJ36_RS07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07080 PF03466 LysR substrate binding domain RJ36_RS07085 PF00324 Amino acid permease RJ36_RS07090 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS07090 PF00593 TonB dependent receptor RJ36_RS07095 PF00756 Putative esterase RJ36_RS07100 PF06779 Uncharacterised MFS-type transporter YbfB RJ36_RS07105 PF01227 GTP cyclohydrolase I RJ36_RS07110 PF04235 Protein of unknown function (DUF418) RJ36_RS07115 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS07120 PF13407 Periplasmic binding protein domain RJ36_RS07125 PF00005 ABC transporter RJ36_RS07130 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS07135 PF01180 Dihydroorotate dehydrogenase RJ36_RS07140 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS07140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RJ36_RS07145 PF02698 DUF218 domain RJ36_RS07150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RJ36_RS07150 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region RJ36_RS07155 PF04172 LrgB-like family RJ36_RS07160 PF03788 LrgA family RJ36_RS07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07165 PF03466 LysR substrate binding domain RJ36_RS07170 PF07690 Major Facilitator Superfamily RJ36_RS07175 PF07883 Cupin domain RJ36_RS07180 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS07185 PF14497 Glutathione S-transferase, C-terminal domain RJ36_RS07185 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS07190 PF01494 FAD binding domain RJ36_RS07195 PF01207 Dihydrouridine synthase (Dus) RJ36_RS07200 PF08241 Methyltransferase domain RJ36_RS07205 PF02321 Outer membrane efflux protein RJ36_RS07210 PF09335 SNARE associated Golgi protein RJ36_RS07215 PF04893 Yip1 domain RJ36_RS07220 PF00768 D-alanyl-D-alanine carboxypeptidase RJ36_RS07230 PF09330 D-lactate dehydrogenase, membrane binding RJ36_RS07230 PF01565 FAD binding domain RJ36_RS07235 PF14310 Fibronectin type III-like domain RJ36_RS07235 PF01915 Glycosyl hydrolase family 3 C-terminal domain RJ36_RS07235 PF00933 Glycosyl hydrolase family 3 N terminal domain RJ36_RS07250 PF07690 Major Facilitator Superfamily RJ36_RS07255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RJ36_RS07260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS07260 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS07270 PF13953 PapC C-terminal domain RJ36_RS07270 PF13954 PapC N-terminal domain RJ36_RS07270 PF00577 Outer membrane usher protein RJ36_RS07275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS07275 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS07280 PF16970 Type-1 fimbrial protein, A RJ36_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07295 PF00005 ABC transporter RJ36_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07305 PF13411 MerR HTH family regulatory protein RJ36_RS07310 PF07694 5TMR of 5TMR-LYT RJ36_RS07310 PF06580 Histidine kinase RJ36_RS07315 PF04397 LytTr DNA-binding domain RJ36_RS07315 PF00072 Response regulator receiver domain RJ36_RS07320 PF07308 Protein of unknown function (DUF1456) RJ36_RS07330 PF01588 Putative tRNA binding domain RJ36_RS07330 PF09334 tRNA synthetases class I (M) RJ36_RS07335 PF10609 NUBPL iron-transfer P-loop NTPase RJ36_RS07340 PF11776 Nickel/cobalt transporter regulator RJ36_RS07345 PF00107 Zinc-binding dehydrogenase RJ36_RS07345 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS07350 PF03466 LysR substrate binding domain RJ36_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07355 PF07702 UTRA domain RJ36_RS07355 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS07360 PF02378 Phosphotransferase system, EIIC RJ36_RS07365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS07370 PF02378 Phosphotransferase system, EIIC RJ36_RS07375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS07375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS07385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RJ36_RS07395 PF02110 Hydroxyethylthiazole kinase family RJ36_RS07400 PF08543 Phosphomethylpyrimidine kinase RJ36_RS07405 PF01848 Hok/gef family RJ36_RS07410 PF00860 Permease family RJ36_RS07415 PF13382 Adenine deaminase C-terminal domain RJ36_RS07415 PF01979 Amidohydrolase family RJ36_RS07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07420 PF03466 LysR substrate binding domain RJ36_RS07425 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS07425 PF07702 UTRA domain RJ36_RS07430 PF00294 pfkB family carbohydrate kinase RJ36_RS07435 PF03747 ADP-ribosylglycohydrolase RJ36_RS07440 PF03825 Nucleoside H+ symporter RJ36_RS07445 PF01791 DeoC/LacD family aldolase RJ36_RS07450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RJ36_RS07450 PF13378 Enolase C-terminal domain-like RJ36_RS07455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS07460 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07465 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS07470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS07470 PF00005 ABC transporter RJ36_RS07475 PF00005 ABC transporter RJ36_RS07475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS07480 PF00781 Diacylglycerol kinase catalytic domain RJ36_RS07485 PF16325 Peptidase family U32 C-terminal domain RJ36_RS07485 PF01136 Peptidase family U32 RJ36_RS07490 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS07490 PF00072 Response regulator receiver domain RJ36_RS07495 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS07495 PF00672 HAMP domain RJ36_RS07500 PF07690 Major Facilitator Superfamily RJ36_RS07505 PF00873 AcrB/AcrD/AcrF family RJ36_RS07510 PF00873 AcrB/AcrD/AcrF family RJ36_RS07515 PF13533 Biotin-lipoyl like RJ36_RS07520 PF00012 Hsp70 protein RJ36_RS07525 PF06029 AlkA N-terminal domain RJ36_RS07525 PF00730 HhH-GPD superfamily base excision DNA repair protein RJ36_RS07530 PF00563 EAL domain RJ36_RS07530 PF08447 PAS fold RJ36_RS07530 PF05231 MASE1 RJ36_RS07530 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS07530 PF13426 PAS domain RJ36_RS07530 PF08448 PAS fold RJ36_RS07535 PF00485 Phosphoribulokinase / Uridine kinase family RJ36_RS07540 PF00692 dUTPase RJ36_RS07545 PF05170 AsmA family RJ36_RS07555 PF01556 DnaJ C terminal domain RJ36_RS07555 PF00226 DnaJ domain RJ36_RS07560 PF03741 Integral membrane protein TerC family RJ36_RS07560 PF00571 CBS domain RJ36_RS07560 PF03471 Transporter associated domain RJ36_RS07565 PF02563 Polysaccharide biosynthesis/export protein RJ36_RS07565 PF10531 SLBB domain RJ36_RS07565 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RJ36_RS07570 PF01451 Low molecular weight phosphotyrosine protein phosphatase RJ36_RS07575 PF13807 G-rich domain on putative tyrosine kinase RJ36_RS07575 PF13614 AAA domain RJ36_RS07575 PF02706 Chain length determinant protein RJ36_RS07580 PF00535 Glycosyl transferase family 2 RJ36_RS07585 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS07590 PF00534 Glycosyl transferases group 1 RJ36_RS07590 PF13439 Glycosyltransferase Family 4 RJ36_RS07600 PF00535 Glycosyl transferase family 2 RJ36_RS07605 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS07610 PF16363 GDP-mannose 4,6 dehydratase RJ36_RS07615 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS07620 PF00293 NUDIX domain RJ36_RS07625 PF13579 Glycosyl transferase 4-like domain RJ36_RS07625 PF00534 Glycosyl transferases group 1 RJ36_RS07630 PF00483 Nucleotidyl transferase RJ36_RS07630 PF01050 Mannose-6-phosphate isomerase RJ36_RS07635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RJ36_RS07635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RJ36_RS07635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RJ36_RS07635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RJ36_RS07640 PF02397 Bacterial sugar transferase RJ36_RS07650 PF04230 Polysaccharide pyruvyl transferase RJ36_RS07655 PF13439 Glycosyltransferase Family 4 RJ36_RS07655 PF00534 Glycosyl transferases group 1 RJ36_RS07665 PF00483 Nucleotidyl transferase RJ36_RS07670 PF02719 Polysaccharide biosynthesis protein RJ36_RS07675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RJ36_RS07680 PF02348 Cytidylyltransferase RJ36_RS07690 PF08666 SAF domain RJ36_RS07690 PF03102 NeuB family RJ36_RS07695 PF01943 Polysaccharide biosynthesis protein RJ36_RS07700 PF07922 Glycosyltransferase family 52 RJ36_RS07715 PF03275 UDP-galactopyranose mutase RJ36_RS07720 PF02397 Bacterial sugar transferase RJ36_RS07725 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RJ36_RS07725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RJ36_RS07730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RJ36_RS07730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RJ36_RS07735 PF02706 Chain length determinant protein RJ36_RS07740 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RJ36_RS07740 PF01502 Phosphoribosyl-AMP cyclohydrolase RJ36_RS07745 PF00977 Histidine biosynthesis protein RJ36_RS07750 PF00977 Histidine biosynthesis protein RJ36_RS07755 PF00117 Glutamine amidotransferase class-I RJ36_RS07760 PF08645 Polynucleotide kinase 3 phosphatase RJ36_RS07760 PF00475 Imidazoleglycerol-phosphate dehydratase RJ36_RS07765 PF00155 Aminotransferase class I and II RJ36_RS07770 PF00815 Histidinol dehydrogenase RJ36_RS07775 PF08029 HisG, C-terminal domain RJ36_RS07775 PF01634 ATP phosphoribosyltransferase RJ36_RS07780 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS07785 PF03466 LysR substrate binding domain RJ36_RS07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07790 PF13520 Amino acid permease RJ36_RS07795 PF04143 Sulphur transport RJ36_RS07800 PF01206 Sulfurtransferase TusA RJ36_RS07805 PF08411 Exonuclease C-terminal RJ36_RS07805 PF00929 Exonuclease RJ36_RS07810 PF00768 D-alanyl-D-alanine carboxypeptidase RJ36_RS07810 PF07943 Penicillin-binding protein 5, C-terminal domain RJ36_RS07815 PF06445 GyrI-like small molecule binding domain RJ36_RS07820 PF04632 Fusaric acid resistance protein family RJ36_RS07825 PF04363 Protein of unknown function (DUF496) RJ36_RS07830 PF00288 GHMP kinases N terminal domain RJ36_RS07835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RJ36_RS07835 PF07685 CobB/CobQ-like glutamine amidotransferase domain RJ36_RS07840 PF03186 CobD/Cbib protein RJ36_RS07845 PF02570 Precorrin-8X methylmutase RJ36_RS07850 PF01888 CbiD RJ36_RS07855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS07860 PF05175 Methyltransferase small domain RJ36_RS07865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS07870 PF01890 Cobalamin synthesis G C-terminus RJ36_RS07870 PF11760 Cobalamin synthesis G N-terminal RJ36_RS07870 PF11761 Cobalamin biosynthesis central region RJ36_RS07875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS07880 PF02571 Precorrin-6x reductase CbiJ/CobK RJ36_RS07885 PF06180 Cobalt chelatase (CbiK) RJ36_RS07890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RJ36_RS07895 PF01891 Cobalt uptake substrate-specific transmembrane region RJ36_RS07900 PF02553 Cobalt transport protein component CbiN RJ36_RS07905 PF02361 Cobalt transport protein RJ36_RS07910 PF00005 ABC transporter RJ36_RS07915 PF07685 CobB/CobQ-like glutamine amidotransferase domain RJ36_RS07920 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RJ36_RS07925 PF02654 Cobalamin-5-phosphate synthase RJ36_RS07930 PF02277 Phosphoribosyltransferase RJ36_RS07935 PF03734 L,D-transpeptidase catalytic domain RJ36_RS07935 PF17969 L,D-transpeptidase C-terminal domain RJ36_RS07945 PF01554 MatE RJ36_RS07960 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RJ36_RS07960 PF01048 Phosphorylase superfamily RJ36_RS07965 PF00083 Sugar (and other) transporter RJ36_RS07965 PF07690 Major Facilitator Superfamily RJ36_RS07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07980 PF03466 LysR substrate binding domain RJ36_RS07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS07985 PF03466 LysR substrate binding domain RJ36_RS07995 PF06167 Glucose-regulated metallo-peptidase M90 RJ36_RS08005 PF05525 Branched-chain amino acid transport protein RJ36_RS08020 PF07690 Major Facilitator Superfamily RJ36_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS08030 PF03466 LysR substrate binding domain RJ36_RS08040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS08050 PF05681 Fumarate hydratase (Fumerase) RJ36_RS08050 PF05683 Fumarase C-terminus RJ36_RS08055 PF00939 Sodium:sulfate symporter transmembrane region RJ36_RS08060 PF00890 FAD binding domain RJ36_RS08060 PF14537 Cytochrome c3 RJ36_RS08065 PF02424 ApbE family RJ36_RS08070 PF00072 Response regulator receiver domain RJ36_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS08075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RJ36_RS08075 PF17203 Single cache domain 3 RJ36_RS08075 PF00989 PAS fold RJ36_RS08080 PF13580 SIS domain RJ36_RS08085 PF00267 Gram-negative porin RJ36_RS08095 PF01966 HD domain RJ36_RS08100 PF18284 DNA methylase N-terminal domain RJ36_RS08100 PF00145 C-5 cytosine-specific DNA methylase RJ36_RS08105 PF03852 DNA mismatch endonuclease Vsr RJ36_RS08110 PF00892 EamA-like transporter family RJ36_RS08115 PF05661 Protein of unknown function (DUF808) RJ36_RS08120 PF09926 Uncharacterized small protein (DUF2158) RJ36_RS08135 PF10733 Protein of unknown function (DUF2525) RJ36_RS08140 PF10781 Dextransucrase DSRB RJ36_RS08145 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS08150 PF01311 Bacterial export proteins, family 1 RJ36_RS08155 PF01313 Bacterial export proteins, family 3 RJ36_RS08160 PF00813 FliP family RJ36_RS08165 PF04347 Flagellar biosynthesis protein, FliO RJ36_RS08170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RJ36_RS08170 PF16973 Flagellar motor switch protein FliN N-terminal RJ36_RS08175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RJ36_RS08175 PF02154 Flagellar motor switch protein FliM RJ36_RS08180 PF03748 Flagellar basal body-associated protein FliL RJ36_RS08185 PF02120 Flagellar hook-length control protein FliK RJ36_RS08190 PF02050 Flagellar FliJ protein RJ36_RS08195 PF18269 T3SS EscN ATPase C-terminal domain RJ36_RS08195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJ36_RS08200 PF02108 Flagellar assembly protein FliH RJ36_RS08205 PF14842 FliG N-terminal domain RJ36_RS08205 PF01706 FliG C-terminal domain RJ36_RS08205 PF14841 FliG middle domain RJ36_RS08210 PF08345 Flagellar M-ring protein C-terminal RJ36_RS08210 PF01514 Secretory protein of YscJ/FliF family RJ36_RS08215 PF02049 Flagellar hook-basal body complex protein FliE RJ36_RS08220 PF01206 Sulfurtransferase TusA RJ36_RS08225 PF04143 Sulphur transport RJ36_RS08230 PF13987 YedD-like protein RJ36_RS08235 PF00128 Alpha amylase, catalytic domain RJ36_RS08235 PF02806 Alpha amylase, C-terminal all-beta domain RJ36_RS08240 PF05400 Flagellar protein FliT RJ36_RS08245 PF02561 Flagellar protein FliS RJ36_RS08250 PF07195 Flagellar hook-associated protein 2 C-terminus RJ36_RS08250 PF02465 Flagellar hook-associated protein 2 N-terminus RJ36_RS08255 PF12445 Flagellin protein RJ36_RS08255 PF00669 Bacterial flagellin N-terminal helical region RJ36_RS08255 PF12445 Flagellin protein RJ36_RS08255 PF00669 Bacterial flagellin N-terminal helical region RJ36_RS08255 PF00700 Bacterial flagellin C-terminal helical region RJ36_RS08255 PF00700 Bacterial flagellin C-terminal helical region RJ36_RS08260 PF04539 Sigma-70 region 3 RJ36_RS08260 PF04545 Sigma-70, region 4 RJ36_RS08260 PF04542 Sigma-70 region 2 RJ36_RS08265 PF02899 Phage integrase, N-terminal SAM-like domain RJ36_RS08270 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS08275 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS08280 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS08285 PF00005 ABC transporter RJ36_RS08290 PF03472 Autoinducer binding domain RJ36_RS08290 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS08295 PF10769 Protein of unknown function (DUF2594) RJ36_RS08300 PF00072 Response regulator receiver domain RJ36_RS08300 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS08305 PF02151 UvrB/uvrC motif RJ36_RS08305 PF01541 GIY-YIG catalytic domain RJ36_RS08305 PF08459 UvrC Helix-hairpin-helix N-terminal RJ36_RS08310 PF01066 CDP-alcohol phosphatidyltransferase RJ36_RS08345 PF03695 Uncharacterised protein family (UPF0149) RJ36_RS08345 PF02810 SEC-C motif RJ36_RS08350 PF03222 Tryptophan/tyrosine permease family RJ36_RS08355 PF10678 Protein of unknown function (DUF2492) RJ36_RS08360 PF00210 Ferritin-like domain RJ36_RS08375 PF07690 Major Facilitator Superfamily RJ36_RS08380 PF10964 Protein of unknown function (DUF2766) RJ36_RS08385 PF00210 Ferritin-like domain RJ36_RS08395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RJ36_RS08400 PF00005 ABC transporter RJ36_RS08405 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS08410 PF02358 Trehalose-phosphatase RJ36_RS08415 PF00982 Glycosyltransferase family 20 RJ36_RS08420 PF00582 Universal stress protein family RJ36_RS08425 PF05247 Flagellar transcriptional activator (FlhD) RJ36_RS08430 PF05280 Flagellar transcriptional activator (FlhC) RJ36_RS08435 PF01618 MotA/TolQ/ExbB proton channel family RJ36_RS08440 PF00691 OmpA family RJ36_RS08440 PF13677 Membrane MotB of proton-channel complex MotA/MotB RJ36_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS08445 PF02895 Signal transducing histidine kinase, homodimeric domain RJ36_RS08445 PF09078 CheY binding RJ36_RS08445 PF01584 CheW-like domain RJ36_RS08445 PF01627 Hpt domain RJ36_RS08450 PF01584 CheW-like domain RJ36_RS08455 PF00375 Sodium:dicarboxylate symporter family RJ36_RS08460 PF00672 HAMP domain RJ36_RS08460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS08460 PF02203 Tar ligand binding domain homologue RJ36_RS08465 PF00672 HAMP domain RJ36_RS08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS08465 PF02203 Tar ligand binding domain homologue RJ36_RS08470 PF03705 CheR methyltransferase, all-alpha domain RJ36_RS08470 PF01739 CheR methyltransferase, SAM binding domain RJ36_RS08475 PF00072 Response regulator receiver domain RJ36_RS08475 PF01339 CheB methylesterase RJ36_RS08480 PF00072 Response regulator receiver domain RJ36_RS08485 PF04344 Chemotaxis phosphatase, CheZ RJ36_RS08490 PF01312 FlhB HrpN YscU SpaS Family RJ36_RS08495 PF00771 FHIPEP family RJ36_RS08500 PF06366 Flagellar protein FlhE RJ36_RS08510 PF07470 Glycosyl Hydrolase Family 88 RJ36_RS08515 PF03485 Arginyl tRNA synthetase N terminal domain RJ36_RS08515 PF05746 DALR anticodon binding domain RJ36_RS08515 PF00750 tRNA synthetases class I (R) RJ36_RS08520 PF06185 YecM protein RJ36_RS08525 PF03932 CutC family RJ36_RS08540 PF08003 Protein of unknown function (DUF1698) RJ36_RS08545 PF13649 Methyltransferase domain RJ36_RS08550 PF01124 MAPEG family RJ36_RS08555 PF01904 Protein of unknown function DUF72 RJ36_RS08560 PF00857 Isochorismatase family RJ36_RS08565 PF02938 GAD domain RJ36_RS08565 PF00152 tRNA synthetases class II (D, K and N) RJ36_RS08565 PF01336 OB-fold nucleic acid binding domain RJ36_RS08570 PF00293 NUDIX domain RJ36_RS08575 PF01709 Transcriptional regulator RJ36_RS08580 PF02075 Crossover junction endodeoxyribonuclease RuvC RJ36_RS08585 PF12849 PBP superfamily domain RJ36_RS08590 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RJ36_RS08600 PF07499 RuvA, C-terminal domain RJ36_RS08600 PF01330 RuvA N terminal domain RJ36_RS08605 PF05491 RuvB C-terminal winged helix domain RJ36_RS08605 PF17864 RuvB AAA lid domain RJ36_RS08605 PF05496 Holliday junction DNA helicase RuvB P-loop domain RJ36_RS08610 PF00950 ABC 3 transport family RJ36_RS08615 PF00005 ABC transporter RJ36_RS08620 PF01297 Zinc-uptake complex component A periplasmic RJ36_RS08625 PF01476 LysM domain RJ36_RS08625 PF01551 Peptidase family M23 RJ36_RS08625 PF08525 Opacity-associated protein A N-terminal motif RJ36_RS08630 PF03279 Bacterial lipid A biosynthesis acyltransferase RJ36_RS08640 PF16874 Glycosyl hydrolase family 36 C-terminal domain RJ36_RS08640 PF16875 Glycosyl hydrolase family 36 N-terminal domain RJ36_RS08645 PF00224 Pyruvate kinase, barrel domain RJ36_RS08645 PF02887 Pyruvate kinase, alpha/beta domain RJ36_RS08650 PF01418 Helix-turn-helix domain, rpiR family RJ36_RS08650 PF01380 SIS domain RJ36_RS08655 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RJ36_RS08655 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RJ36_RS08660 PF00920 Dehydratase family RJ36_RS08665 PF01081 KDPG and KHG aldolase RJ36_RS08670 PF02222 ATP-grasp domain RJ36_RS08675 PF04391 Protein of unknown function (DUF533) RJ36_RS08680 PF00326 Prolyl oligopeptidase family RJ36_RS08680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RJ36_RS08685 PF00929 Exonuclease RJ36_RS08690 PF00795 Carbon-nitrogen hydrolase RJ36_RS08695 PF06440 DNA polymerase III, theta subunit RJ36_RS08700 PF04234 CopC domain RJ36_RS08705 PF05425 Copper resistance protein D RJ36_RS08710 PF10709 Protein of unknown function (DUF2511) RJ36_RS08720 PF01501 Glycosyl transferase family 8 RJ36_RS08720 PF00535 Glycosyl transferase family 2 RJ36_RS08725 PF03279 Bacterial lipid A biosynthesis acyltransferase RJ36_RS08730 PF07358 Protein of unknown function (DUF1482) RJ36_RS08735 PF07351 Protein of unknown function (DUF1480) RJ36_RS08740 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF RJ36_RS08740 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RJ36_RS08740 PF01189 16S rRNA methyltransferase RsmB/F RJ36_RS08745 PF02470 MlaD protein RJ36_RS08750 PF04403 Paraquat-inducible protein A RJ36_RS08755 PF13185 GAF domain RJ36_RS08760 PF17516 ProQ C-terminal domain RJ36_RS08760 PF04352 ProQ/FINO family RJ36_RS08765 PF00595 PDZ domain RJ36_RS08765 PF11818 C-terminal domain of tail specific protease (DUF3340) RJ36_RS08765 PF17804 Tail specific protease N-terminal domain RJ36_RS08765 PF03572 Peptidase family S41 RJ36_RS08770 PF01435 Peptidase family M48 RJ36_RS08775 PF07690 Major Facilitator Superfamily RJ36_RS08780 PF01614 Bacterial transcriptional regulator RJ36_RS08780 PF09339 IclR helix-turn-helix domain RJ36_RS08785 PF13996 YobH-like protein RJ36_RS08790 PF13998 MgrB protein RJ36_RS08795 PF13974 YebO-like protein RJ36_RS08800 PF00313 'Cold-shock' DNA-binding domain RJ36_RS08805 PF03717 Penicillin-binding Protein dimerisation domain RJ36_RS08805 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS08810 PF13847 Methyltransferase domain RJ36_RS08815 PF02659 Putative manganese efflux pump RJ36_RS08820 PF06173 Protein of unknown function (DUF986) RJ36_RS08825 PF03613 PTS system mannose/fructose/sorbose family IID component RJ36_RS08830 PF03609 PTS system sorbose-specific iic component RJ36_RS08835 PF03830 PTS system sorbose subfamily IIB component RJ36_RS08835 PF03610 PTS system fructose IIA component RJ36_RS08840 PF03471 Transporter associated domain RJ36_RS08840 PF03741 Integral membrane protein TerC family RJ36_RS08845 PF00563 EAL domain RJ36_RS08845 PF12792 CSS motif domain associated with EAL RJ36_RS08850 PF03315 Serine dehydratase beta chain RJ36_RS08850 PF03313 Serine dehydratase alpha chain RJ36_RS08855 PF00293 NUDIX domain RJ36_RS08860 PF00425 chorismate binding enzyme RJ36_RS08860 PF04715 Anthranilate synthase component I, N terminal region RJ36_RS08865 PF03701 Uncharacterised protein family (UPF0181) RJ36_RS08870 PF01042 Endoribonuclease L-PSP RJ36_RS08875 PF13307 Helicase C-terminal domain RJ36_RS08875 PF04851 Type III restriction enzyme, res subunit RJ36_RS08880 PF00814 Glycoprotease family RJ36_RS08885 PF03843 Outer membrane lipoprotein Slp family RJ36_RS08890 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS08890 PF00501 AMP-binding enzyme RJ36_RS08895 PF00570 HRDC domain RJ36_RS08895 PF01612 3'-5' exonuclease RJ36_RS08900 PF03776 Septum formation topological specificity factor MinE RJ36_RS08905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RJ36_RS08910 PF03775 Septum formation inhibitor MinC, C-terminal domain RJ36_RS08910 PF05209 Septum formation inhibitor MinC, N-terminal domain RJ36_RS08915 PF05166 YcgL domain RJ36_RS08920 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS08925 PF03692 Putative zinc- or iron-chelating domain RJ36_RS08935 PF02600 Disulfide bond formation protein DsbB RJ36_RS08940 PF06450 Bacterial Na+/H+ antiporter B (NhaB) RJ36_RS08945 PF07840 FadR C-terminal domain RJ36_RS08945 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS08950 PF04293 SpoVR like protein RJ36_RS08955 PF01266 FAD dependent oxidoreductase RJ36_RS08960 PF01168 Alanine racemase, N-terminal domain RJ36_RS08960 PF00842 Alanine racemase, C-terminal domain RJ36_RS08965 PF03471 Transporter associated domain RJ36_RS08965 PF02080 TrkA-C domain RJ36_RS08965 PF00999 Sodium/hydrogen exchanger family RJ36_RS08970 PF17676 LD-carboxypeptidase C-terminal domain RJ36_RS08970 PF02016 LD-carboxypeptidase N-terminal domain RJ36_RS08975 PF01464 Transglycosylase SLT domain RJ36_RS08980 PF07238 PilZ domain RJ36_RS08980 PF07317 Flagellar regulator YcgR RJ36_RS08985 PF04226 Transglycosylase associated protein RJ36_RS08990 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS08990 PF00593 TonB dependent receptor RJ36_RS08995 PF01204 Trehalase RJ36_RS09000 PF01425 Amidase RJ36_RS09005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RJ36_RS09005 PF02785 Biotin carboxylase C-terminal domain RJ36_RS09005 PF00289 Biotin carboxylase, N-terminal domain RJ36_RS09010 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS09010 PF07729 FCD domain RJ36_RS09015 PF13188 PAS domain RJ36_RS09015 PF00158 Sigma-54 interaction domain RJ36_RS09015 PF02954 Bacterial regulatory protein, Fis family RJ36_RS09020 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS09030 PF00005 ABC transporter RJ36_RS09030 PF12399 Branched-chain amino acid ATP-binding cassette transporter RJ36_RS09035 PF00005 ABC transporter RJ36_RS09040 PF06506 Propionate catabolism activator RJ36_RS09040 PF00158 Sigma-54 interaction domain RJ36_RS09040 PF02954 Bacterial regulatory protein, Fis family RJ36_RS09055 PF00285 Citrate synthase, C-terminal domain RJ36_RS09060 PF03972 MmgE/PrpD family RJ36_RS09065 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS09065 PF00501 AMP-binding enzyme RJ36_RS09065 PF16177 Acetyl-coenzyme A synthetase N-terminus RJ36_RS09070 PF06071 Protein of unknown function (DUF933) RJ36_RS09070 PF01926 50S ribosome-binding GTPase RJ36_RS09075 PF01195 Peptidyl-tRNA hydrolase RJ36_RS09080 PF10762 Protein of unknown function (DUF2583) RJ36_RS09085 PF00916 Sulfate permease family RJ36_RS09085 PF01740 STAS domain RJ36_RS09090 PF14572 Phosphoribosyl synthetase-associated domain RJ36_RS09090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RJ36_RS09095 PF08544 GHMP kinases C terminal RJ36_RS09095 PF00288 GHMP kinases N terminal domain RJ36_RS09100 PF03550 Outer membrane lipoprotein LolB RJ36_RS09105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RJ36_RS09105 PF01488 Shikimate / quinate 5-dehydrogenase RJ36_RS09105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RJ36_RS09110 PF00472 RF-1 domain RJ36_RS09110 PF03462 PCRF domain RJ36_RS09115 PF17827 PrmC N-terminal domain RJ36_RS09115 PF13847 Methyltransferase domain RJ36_RS09120 PF04247 Invasion gene expression up-regulator, SirB RJ36_RS09125 PF13369 Transglutaminase-like superfamily RJ36_RS09130 PF00793 DAHP synthetase I family RJ36_RS09135 PF13940 Toxin Ldr, type I toxin-antitoxin system RJ36_RS09145 PF13940 Toxin Ldr, type I toxin-antitoxin system RJ36_RS09150 PF01699 Sodium/calcium exchanger protein RJ36_RS09155 PF06150 ChaB RJ36_RS09160 PF04752 ChaC-like protein RJ36_RS09170 PF02635 DsrE/DsrF-like family RJ36_RS09175 PF08376 Nitrate and nitrite sensing RJ36_RS09175 PF03861 ANTAR domain RJ36_RS09185 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS09190 PF00005 ABC transporter RJ36_RS09200 PF01568 Molydopterin dinucleotide binding domain RJ36_RS09200 PF00384 Molybdopterin oxidoreductase RJ36_RS09200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS09200 PF04324 BFD-like [2Fe-2S] binding domain RJ36_RS09205 PF11924 Inverse autotransporter, beta-domain RJ36_RS09210 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS09210 PF00072 Response regulator receiver domain RJ36_RS09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS09215 PF07730 Histidine kinase RJ36_RS09215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RJ36_RS09215 PF00672 HAMP domain RJ36_RS09220 PF07690 Major Facilitator Superfamily RJ36_RS09225 PF01568 Molydopterin dinucleotide binding domain RJ36_RS09225 PF14710 Respiratory nitrate reductase alpha N-terminal RJ36_RS09225 PF00384 Molybdopterin oxidoreductase RJ36_RS09230 PF13247 4Fe-4S dicluster domain RJ36_RS09230 PF14711 Respiratory nitrate reductase beta C-terminal RJ36_RS09235 PF02613 Nitrate reductase delta subunit RJ36_RS09240 PF02665 Nitrate reductase gamma subunit RJ36_RS09255 PF00551 Formyl transferase RJ36_RS09255 PF01842 ACT domain RJ36_RS09260 PF02810 SEC-C motif RJ36_RS09265 PF01734 Patatin-like phospholipase RJ36_RS09270 PF00072 Response regulator receiver domain RJ36_RS09275 PF00483 Nucleotidyl transferase RJ36_RS09280 PF00816 H-NS histone family RJ36_RS09285 PF00265 Thymidine kinase RJ36_RS09290 PF00171 Aldehyde dehydrogenase family RJ36_RS09290 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS09295 PF01914 MarC family integral membrane protein RJ36_RS09300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS09305 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS09310 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS09310 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS09315 PF00005 ABC transporter RJ36_RS09315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS09320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS09320 PF00005 ABC transporter RJ36_RS09325 PF00520 Ion transport protein RJ36_RS09325 PF00027 Cyclic nucleotide-binding domain RJ36_RS09330 PF04269 Protein of unknown function, DUF440 RJ36_RS09335 PF13091 PLD-like domain RJ36_RS09335 PF13396 Phospholipase_D-nuclease N-terminal RJ36_RS09340 PF03795 YCII-related domain RJ36_RS09345 PF03544 Gram-negative bacterial TonB protein C-terminal RJ36_RS09350 PF03881 Fructosamine kinase RJ36_RS09355 PF11080 Endoribonuclease GhoS RJ36_RS09360 PF00294 pfkB family carbohydrate kinase RJ36_RS09365 PF04338 Protein of unknown function, DUF481 RJ36_RS09375 PF07274 Protein of unknown function (DUF1440) RJ36_RS09390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJ36_RS09390 PF03129 Anticodon binding domain RJ36_RS09390 PF02824 TGS domain RJ36_RS09390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RJ36_RS09395 PF05198 Translation initiation factor IF-3, N-terminal domain RJ36_RS09395 PF00707 Translation initiation factor IF-3, C-terminal domain RJ36_RS09400 PF01632 Ribosomal protein L35 RJ36_RS09405 PF00453 Ribosomal protein L20 RJ36_RS09410 PF01409 tRNA synthetases class II core domain (F) RJ36_RS09410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RJ36_RS09415 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RJ36_RS09415 PF03483 B3/4 domain RJ36_RS09415 PF03484 tRNA synthetase B5 domain RJ36_RS09415 PF01588 Putative tRNA binding domain RJ36_RS09415 PF03147 Ferredoxin-fold anticodon binding domain RJ36_RS09420 PF00216 Bacterial DNA-binding protein RJ36_RS09425 PF01032 FecCD transport family RJ36_RS09430 PF00255 Glutathione peroxidase RJ36_RS09435 PF00005 ABC transporter RJ36_RS09440 PF00877 NlpC/P60 family RJ36_RS09445 PF00563 EAL domain RJ36_RS09450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RJ36_RS09455 PF00793 DAHP synthetase I family RJ36_RS09460 PF03618 Kinase/pyrophosphorylase RJ36_RS09465 PF00391 PEP-utilising enzyme, mobile domain RJ36_RS09465 PF02896 PEP-utilising enzyme, TIM barrel domain RJ36_RS09465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RJ36_RS09470 PF14310 Fibronectin type III-like domain RJ36_RS09470 PF00933 Glycosyl hydrolase family 3 N terminal domain RJ36_RS09470 PF01915 Glycosyl hydrolase family 3 C-terminal domain RJ36_RS09475 PF01594 AI-2E family transporter RJ36_RS09480 PF01565 FAD binding domain RJ36_RS09480 PF13183 4Fe-4S dicluster domain RJ36_RS09480 PF02913 FAD linked oxidases, C-terminal domain RJ36_RS09485 PF03061 Thioesterase superfamily RJ36_RS09500 PF01521 Iron-sulphur cluster biosynthesis RJ36_RS09505 PF01458 Uncharacterized protein family (UPF0051) RJ36_RS09510 PF00005 ABC transporter RJ36_RS09515 PF01458 Uncharacterized protein family (UPF0051) RJ36_RS09520 PF00266 Aminotransferase class-V RJ36_RS09525 PF02657 Fe-S metabolism associated domain RJ36_RS09530 PF01476 LysM domain RJ36_RS09530 PF03734 L,D-transpeptidase catalytic domain RJ36_RS09530 PF17969 L,D-transpeptidase C-terminal domain RJ36_RS09535 PF04728 Lipoprotein leucine-zipper RJ36_RS09540 PF02887 Pyruvate kinase, alpha/beta domain RJ36_RS09540 PF00224 Pyruvate kinase, barrel domain RJ36_RS09545 PF10965 Protein of unknown function (DUF2767) RJ36_RS09550 PF17926 Tetracyclin repressor-like, C-terminal domain RJ36_RS09550 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS09555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RJ36_RS09555 PF01261 Xylose isomerase-like TIM barrel RJ36_RS09560 PF07690 Major Facilitator Superfamily RJ36_RS09565 PF01488 Shikimate / quinate 5-dehydrogenase RJ36_RS09565 PF08501 Shikimate dehydrogenase substrate binding domain RJ36_RS09565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RJ36_RS09575 PF00005 ABC transporter RJ36_RS09580 PF01032 FecCD transport family RJ36_RS09585 PF01497 Periplasmic binding protein RJ36_RS09590 PF01614 Bacterial transcriptional regulator RJ36_RS09590 PF09339 IclR helix-turn-helix domain RJ36_RS09595 PF01494 FAD binding domain RJ36_RS09600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RJ36_RS09605 PF12697 Alpha/beta hydrolase family RJ36_RS09610 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS09615 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RJ36_RS09615 PF01118 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS09620 PF00682 HMGL-like RJ36_RS09620 PF07836 DmpG-like communication domain RJ36_RS09625 PF07690 Major Facilitator Superfamily RJ36_RS09630 PF01230 HIT domain RJ36_RS09635 PF07233 Protein of unknown function (DUF1425) RJ36_RS09640 PF13036 Peptidoglycan-synthase activator LpoB RJ36_RS09645 PF01636 Phosphotransferase enzyme family RJ36_RS09650 PF00933 Glycosyl hydrolase family 3 N terminal domain RJ36_RS09655 PF05728 Uncharacterised protein family (UPF0227) RJ36_RS09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS09665 PF05433 Glycine zipper 2TM domain RJ36_RS09685 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS09690 PF07338 Protein of unknown function (DUF1471) RJ36_RS09695 PF01476 LysM domain RJ36_RS09695 PF17969 L,D-transpeptidase C-terminal domain RJ36_RS09695 PF03734 L,D-transpeptidase catalytic domain RJ36_RS09700 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS09705 PF00005 ABC transporter RJ36_RS09710 PF01032 FecCD transport family RJ36_RS09715 PF01032 FecCD transport family RJ36_RS09750 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RJ36_RS09755 PF01554 MatE RJ36_RS09760 PF00677 Lumazine binding domain RJ36_RS09770 PF07690 Major Facilitator Superfamily RJ36_RS09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS09775 PF03466 LysR substrate binding domain RJ36_RS09780 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS09790 PF07690 Major Facilitator Superfamily RJ36_RS09795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RJ36_RS09795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RJ36_RS09800 PF00877 NlpC/P60 family RJ36_RS09805 PF00462 Glutaredoxin RJ36_RS09810 PF00929 Exonuclease RJ36_RS09815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RJ36_RS09820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS09825 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS09825 PF16925 Tetracyclin repressor-like, C-terminal domain RJ36_RS09830 PF06945 Protein of unknown function (DUF1289) RJ36_RS09835 PF00248 Aldo/keto reductase family RJ36_RS09840 PF00080 Copper/zinc superoxide dismutase (SODC) RJ36_RS09845 PF04632 Fusaric acid resistance protein family RJ36_RS09850 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS09850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS09855 PF07869 Protein of unknown function (DUF1656) RJ36_RS09860 PF01047 MarR family RJ36_RS09865 PF17158 Membrane-associated sensor, integral membrane domain RJ36_RS09865 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS09870 PF05433 Glycine zipper 2TM domain RJ36_RS09875 PF03702 Anhydro-N-acetylmuramic acid kinase RJ36_RS09880 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RJ36_RS09885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RJ36_RS09885 PF01243 Pyridoxamine 5'-phosphate oxidase RJ36_RS09890 PF00579 tRNA synthetases class I (W and Y) RJ36_RS09895 PF00043 Glutathione S-transferase, C-terminal domain RJ36_RS09895 PF02798 Glutathione S-transferase, N-terminal domain RJ36_RS09900 PF00854 POT family RJ36_RS09905 PF10576 Iron-sulfur binding domain of endonuclease III RJ36_RS09905 PF00633 Helix-hairpin-helix motif RJ36_RS09905 PF00730 HhH-GPD superfamily base excision DNA repair protein RJ36_RS09910 PF02508 Rnf-Nqr subunit, membrane protein RJ36_RS09915 PF04205 FMN-binding domain RJ36_RS09920 PF03116 NQR2, RnfD, RnfE family RJ36_RS09925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RJ36_RS09925 PF12838 4Fe-4S dicluster domain RJ36_RS09925 PF13375 RnfC Barrel sandwich hybrid domain RJ36_RS09925 PF10531 SLBB domain RJ36_RS09930 PF04060 Putative Fe-S cluster RJ36_RS09935 PF02508 Rnf-Nqr subunit, membrane protein RJ36_RS09940 PF10754 Protein of unknown function (DUF2569) RJ36_RS09945 PF05321 Haemolysin expression modulating protein RJ36_RS09950 PF00232 Glycosyl hydrolase family 1 RJ36_RS09960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS09960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS09965 PF00962 Adenosine/AMP deaminase RJ36_RS09970 PF00155 Aminotransferase class I and II RJ36_RS09975 PF00367 phosphotransferase system, EIIB RJ36_RS09975 PF02378 Phosphotransferase system, EIIC RJ36_RS09980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RJ36_RS09980 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS09985 PF06097 Bacterial protein of unknown function (DUF945) RJ36_RS09990 PF01238 Phosphomannose isomerase type I RJ36_RS09995 PF05681 Fumarate hydratase (Fumerase) RJ36_RS09995 PF05683 Fumarase C-terminus RJ36_RS10000 PF10415 Fumarase C C-terminus RJ36_RS10000 PF00206 Lyase RJ36_RS10005 PF05472 DNA replication terminus site-binding protein (Ter protein) RJ36_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS10010 PF00672 HAMP domain RJ36_RS10010 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS10015 PF00072 Response regulator receiver domain RJ36_RS10015 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS10020 PF06942 GlpM protein RJ36_RS10030 PF13520 Amino acid permease RJ36_RS10035 PF07338 Protein of unknown function (DUF1471) RJ36_RS10040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RJ36_RS10040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RJ36_RS10040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RJ36_RS10045 PF02233 NAD(P) transhydrogenase beta subunit RJ36_RS10050 PF15930 Domain of unknown function RJ36_RS10055 PF00582 Universal stress protein family RJ36_RS10060 PF01717 Cobalamin-independent synthase, Catalytic domain RJ36_RS10065 PF00561 alpha/beta hydrolase fold RJ36_RS10070 PF00027 Cyclic nucleotide-binding domain RJ36_RS10070 PF13545 Crp-like helix-turn-helix domain RJ36_RS10075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RJ36_RS10075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RJ36_RS10080 PF01713 Smr domain RJ36_RS10085 PF09339 IclR helix-turn-helix domain RJ36_RS10085 PF01614 Bacterial transcriptional regulator RJ36_RS10090 PF01144 Coenzyme A transferase RJ36_RS10095 PF01144 Coenzyme A transferase RJ36_RS10100 PF00108 Thiolase, N-terminal domain RJ36_RS10100 PF02803 Thiolase, C-terminal domain RJ36_RS10105 PF10397 Adenylosuccinate lyase C-terminus RJ36_RS10105 PF00206 Lyase RJ36_RS10110 PF12146 Serine aminopeptidase, S33 RJ36_RS10115 PF02627 Carboxymuconolactone decarboxylase family RJ36_RS10125 PF00171 Aldehyde dehydrogenase family RJ36_RS10145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS10150 PF10735 Protein of unknown function (DUF2526) RJ36_RS10155 PF04657 Putative inner membrane exporter, YdcZ RJ36_RS10160 PF00583 Acetyltransferase (GNAT) family RJ36_RS10165 PF01381 Helix-turn-helix RJ36_RS10165 PF08671 Anti-repressor SinI RJ36_RS10170 PF16884 N-terminal domain of oxidoreductase RJ36_RS10170 PF00107 Zinc-binding dehydrogenase RJ36_RS10175 PF07729 FCD domain RJ36_RS10175 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS10180 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS10180 PF00593 TonB dependent receptor RJ36_RS10190 PF00324 Amino acid permease RJ36_RS10215 PF13417 Glutathione S-transferase, N-terminal domain RJ36_RS10230 PF01361 Tautomerase enzyme RJ36_RS10235 PF01613 Flavin reductase like domain RJ36_RS10240 PF12706 Beta-lactamase superfamily domain RJ36_RS10245 PF00797 N-acetyltransferase RJ36_RS10255 PF07690 Major Facilitator Superfamily RJ36_RS10260 PF02665 Nitrate reductase gamma subunit RJ36_RS10265 PF02613 Nitrate reductase delta subunit RJ36_RS10270 PF13247 4Fe-4S dicluster domain RJ36_RS10270 PF14711 Respiratory nitrate reductase beta C-terminal RJ36_RS10275 PF00384 Molybdopterin oxidoreductase RJ36_RS10275 PF14710 Respiratory nitrate reductase alpha N-terminal RJ36_RS10275 PF01568 Molydopterin dinucleotide binding domain RJ36_RS10280 PF07690 Major Facilitator Superfamily RJ36_RS10285 PF01614 Bacterial transcriptional regulator RJ36_RS10285 PF09339 IclR helix-turn-helix domain RJ36_RS10290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RJ36_RS10290 PF13378 Enolase C-terminal domain-like RJ36_RS10295 PF02426 Muconolactone delta-isomerase RJ36_RS10300 PF00775 Dioxygenase RJ36_RS10300 PF04444 Catechol dioxygenase N terminus RJ36_RS10305 PF00355 Rieske [2Fe-2S] domain RJ36_RS10305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RJ36_RS10310 PF00866 Ring hydroxylating beta subunit RJ36_RS10315 PF00970 Oxidoreductase FAD-binding domain RJ36_RS10315 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS10315 PF00175 Oxidoreductase NAD-binding domain RJ36_RS10320 PF00106 short chain dehydrogenase RJ36_RS10325 PF00892 EamA-like transporter family RJ36_RS10330 PF01568 Molydopterin dinucleotide binding domain RJ36_RS10330 PF00384 Molybdopterin oxidoreductase RJ36_RS10330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10335 PF01568 Molydopterin dinucleotide binding domain RJ36_RS10335 PF00384 Molybdopterin oxidoreductase RJ36_RS10335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10340 PF13247 4Fe-4S dicluster domain RJ36_RS10340 PF12800 4Fe-4S binding domain RJ36_RS10340 PF09163 Formate dehydrogenase N, transmembrane RJ36_RS10345 PF01292 Prokaryotic cytochrome b561 RJ36_RS10355 PF07690 Major Facilitator Superfamily RJ36_RS10360 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS10360 PF00107 Zinc-binding dehydrogenase RJ36_RS10365 PF16326 ABC transporter C-terminal domain RJ36_RS10365 PF00005 ABC transporter RJ36_RS10365 PF12848 ABC transporter RJ36_RS10370 PF03949 Malic enzyme, NAD binding domain RJ36_RS10370 PF00390 Malic enzyme, N-terminal domain RJ36_RS10375 PF00107 Zinc-binding dehydrogenase RJ36_RS10375 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS10380 PF02566 OsmC-like protein RJ36_RS10385 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RJ36_RS10395 PF10810 Protein of unknown function (DUF2545) RJ36_RS10405 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS10420 PF10798 Biofilm development protein YmgB/AriR RJ36_RS10430 PF10798 Biofilm development protein YmgB/AriR RJ36_RS10435 PF00563 EAL domain RJ36_RS10435 PF04940 Sensors of blue-light using FAD RJ36_RS10440 PF13411 MerR HTH family regulatory protein RJ36_RS10450 PF13478 XdhC Rossmann domain RJ36_RS10450 PF02625 XdhC and CoxI family RJ36_RS10455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RJ36_RS10455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RJ36_RS10460 PF03450 CO dehydrogenase flavoprotein C-terminal domain RJ36_RS10460 PF00941 FAD binding domain in molybdopterin dehydrogenase RJ36_RS10465 PF10518 TAT (twin-arginine translocation) pathway signal sequence RJ36_RS10465 PF01799 [2Fe-2S] binding domain RJ36_RS10465 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS10470 PF13018 Extended Signal Peptide of Type V secretion system RJ36_RS10475 PF01381 Helix-turn-helix RJ36_RS10480 PF13657 HipA N-terminal domain RJ36_RS10480 PF07804 HipA-like C-terminal domain RJ36_RS10490 PF00128 Alpha amylase, catalytic domain RJ36_RS10495 PF11941 Domain of unknown function (DUF3459) RJ36_RS10495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RJ36_RS10495 PF00128 Alpha amylase, catalytic domain RJ36_RS10505 PF00282 Pyridoxal-dependent decarboxylase conserved domain RJ36_RS10510 PF00202 Aminotransferase class-III RJ36_RS10515 PF00696 Amino acid kinase family RJ36_RS10515 PF01842 ACT domain RJ36_RS10520 PF09905 DNA-binding protein VF530 RJ36_RS10525 PF02638 Glycosyl hydrolase-like 10 RJ36_RS10530 PF04972 BON domain RJ36_RS10530 PF01476 LysM domain RJ36_RS10535 PF03070 TENA/THI-4/PQQC family RJ36_RS10540 PF00005 ABC transporter RJ36_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS10550 PF09084 NMT1/THI5 like RJ36_RS10555 PF06039 Malate:quinone oxidoreductase (Mqo) RJ36_RS10560 PF01062 Bestrophin, RFP-TM, chloride channel RJ36_RS10565 PF01232 Mannitol dehydrogenase Rossmann domain RJ36_RS10565 PF08125 Mannitol dehydrogenase C-terminal domain RJ36_RS10575 PF13811 Domain of unknown function (DUF4186) RJ36_RS10580 PF04960 Glutaminase RJ36_RS10585 PF00171 Aldehyde dehydrogenase family RJ36_RS10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS10590 PF03466 LysR substrate binding domain RJ36_RS10605 PF00455 DeoR C terminal sensor domain RJ36_RS10605 PF08220 DeoR-like helix-turn-helix domain RJ36_RS10610 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RJ36_RS10615 PF07005 Sugar-binding N-terminal domain RJ36_RS10615 PF17042 Nucleotide-binding C-terminal domain RJ36_RS10620 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS10625 PF00701 Dihydrodipicolinate synthetase family RJ36_RS10630 PF03741 Integral membrane protein TerC family RJ36_RS10650 PF02567 Phenazine biosynthesis-like protein RJ36_RS10655 PF07690 Major Facilitator Superfamily RJ36_RS10660 PF01914 MarC family integral membrane protein RJ36_RS10665 PF01047 MarR family RJ36_RS10670 PF12833 Helix-turn-helix domain RJ36_RS10675 PF13999 MarB protein RJ36_RS10680 PF00892 EamA-like transporter family RJ36_RS10685 PF07690 Major Facilitator Superfamily RJ36_RS10695 PF01965 DJ-1/PfpI family RJ36_RS10700 PF02508 Rnf-Nqr subunit, membrane protein RJ36_RS10705 PF01432 Peptidase family M3 RJ36_RS10710 PF00106 short chain dehydrogenase RJ36_RS10715 PF07729 FCD domain RJ36_RS10715 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS10720 PF00582 Universal stress protein family RJ36_RS10725 PF14001 YdfZ protein RJ36_RS10730 PF08125 Mannitol dehydrogenase C-terminal domain RJ36_RS10730 PF01232 Mannitol dehydrogenase Rossmann domain RJ36_RS10735 PF07690 Major Facilitator Superfamily RJ36_RS10735 PF00083 Sugar (and other) transporter RJ36_RS10740 PF00107 Zinc-binding dehydrogenase RJ36_RS10740 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS10745 PF13378 Enolase C-terminal domain-like RJ36_RS10745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RJ36_RS10750 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RJ36_RS10755 PF06932 Protein of unknown function (DUF1283) RJ36_RS10760 PF13302 Acetyltransferase (GNAT) domain RJ36_RS10765 PF06788 Uncharacterised protein family (UPF0257) RJ36_RS10770 PF06649 Protein of unknown function (DUF1161) RJ36_RS10775 PF01568 Molydopterin dinucleotide binding domain RJ36_RS10775 PF00384 Molybdopterin oxidoreductase RJ36_RS10775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10780 PF01568 Molydopterin dinucleotide binding domain RJ36_RS10780 PF00384 Molybdopterin oxidoreductase RJ36_RS10780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10785 PF13247 4Fe-4S dicluster domain RJ36_RS10785 PF12800 4Fe-4S binding domain RJ36_RS10790 PF04976 DMSO reductase anchor subunit (DmsC) RJ36_RS10795 PF02613 Nitrate reductase delta subunit RJ36_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS10805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RJ36_RS10810 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS10815 PF00571 CBS domain RJ36_RS10815 PF00005 ABC transporter RJ36_RS10820 PF00654 Voltage gated chloride channel RJ36_RS10830 PF00480 ROK family RJ36_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS10835 PF03466 LysR substrate binding domain RJ36_RS10840 PF07690 Major Facilitator Superfamily RJ36_RS10850 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RJ36_RS10860 PF00089 Trypsin RJ36_RS10865 PF00893 Small Multidrug Resistance protein RJ36_RS10870 PF00893 Small Multidrug Resistance protein RJ36_RS10880 PF01594 AI-2E family transporter RJ36_RS10885 PF07690 Major Facilitator Superfamily RJ36_RS10890 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS10895 PF13438 Domain of unknown function (DUF4113) RJ36_RS10895 PF00817 impB/mucB/samB family RJ36_RS10895 PF11799 impB/mucB/samB family C-terminal domain RJ36_RS10895 PF11798 IMS family HHH motif RJ36_RS10900 PF00717 Peptidase S24-like RJ36_RS10905 PF12794 Mechanosensitive ion channel inner membrane domain 1 RJ36_RS10905 PF12795 Mechanosensitive ion channel porin domain RJ36_RS10905 PF00924 Mechanosensitive ion channel RJ36_RS10910 PF00753 Metallo-beta-lactamase superfamily RJ36_RS10910 PF14863 Alkyl sulfatase dimerisation RJ36_RS10910 PF14864 Alkyl sulfatase C-terminal RJ36_RS10915 PF00691 OmpA family RJ36_RS10915 PF01389 OmpA-like transmembrane domain RJ36_RS10920 PF15977 Winged helix-turn-helix DNA binding RJ36_RS10925 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RJ36_RS10930 PF14863 Alkyl sulfatase dimerisation RJ36_RS10930 PF14864 Alkyl sulfatase C-terminal RJ36_RS10930 PF00753 Metallo-beta-lactamase superfamily RJ36_RS10935 PF00285 Citrate synthase, C-terminal domain RJ36_RS10940 PF01848 Hok/gef family RJ36_RS10970 PF00171 Aldehyde dehydrogenase family RJ36_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS10980 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS10985 PF00005 ABC transporter RJ36_RS10985 PF08402 TOBE domain RJ36_RS10990 PF13416 Bacterial extracellular solute-binding protein RJ36_RS10995 PF00155 Aminotransferase class I and II RJ36_RS10995 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS11005 PF03824 High-affinity nickel-transport protein RJ36_RS11010 PF02583 Metal-sensitive transcriptional repressor RJ36_RS11020 PF01654 Cytochrome bd terminal oxidase subunit I RJ36_RS11025 PF02322 Cytochrome bd terminal oxidase subunit II RJ36_RS11050 PF12392 Collagenase RJ36_RS11050 PF01136 Peptidase family U32 RJ36_RS11055 PF07883 Cupin domain RJ36_RS11055 PF01381 Helix-turn-helix RJ36_RS11060 PF03594 Benzoate membrane transport protein RJ36_RS11065 PF12833 Helix-turn-helix domain RJ36_RS11075 PF11769 Protein of unknown function (DUF3313) RJ36_RS11080 PF03848 Tellurite resistance protein TehB RJ36_RS11085 PF03595 Voltage-dependent anion channel RJ36_RS11090 PF18836 Beta solenoid repeat from YDCK RJ36_RS11095 PF13302 Acetyltransferase (GNAT) domain RJ36_RS11100 PF04349 Periplasmic glucan biosynthesis protein, MdoG RJ36_RS11110 PF00135 Carboxylesterase family RJ36_RS11115 PF07063 Domain of unknown function (DUF1338) RJ36_RS11120 PF00775 Dioxygenase RJ36_RS11120 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RJ36_RS11125 PF00775 Dioxygenase RJ36_RS11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS11130 PF03466 LysR substrate binding domain RJ36_RS11135 PF01011 PQQ enzyme repeat RJ36_RS11135 PF13360 PQQ-like domain RJ36_RS11140 PF02203 Tar ligand binding domain homologue RJ36_RS11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS11140 PF00672 HAMP domain RJ36_RS11145 PF00107 Zinc-binding dehydrogenase RJ36_RS11145 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS11150 PF02583 Metal-sensitive transcriptional repressor RJ36_RS11155 PF01848 Hok/gef family RJ36_RS11160 PF01810 LysE type translocator RJ36_RS11165 PF01292 Prokaryotic cytochrome b561 RJ36_RS11170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS11170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RJ36_RS11175 PF02698 DUF218 domain RJ36_RS11180 PF00083 Sugar (and other) transporter RJ36_RS11185 PF11898 Domain of unknown function (DUF3418) RJ36_RS11185 PF04408 Helicase associated domain (HA2) RJ36_RS11185 PF00270 DEAD/DEAH box helicase RJ36_RS11185 PF00271 Helicase conserved C-terminal domain RJ36_RS11185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RJ36_RS11190 PF02525 Flavodoxin-like fold RJ36_RS11195 PF00248 Aldo/keto reductase family RJ36_RS11200 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS11205 PF07848 PaaX-like protein RJ36_RS11205 PF08223 PaaX-like protein C-terminal domain RJ36_RS11210 PF14535 AMP-binding enzyme C-terminal domain RJ36_RS11210 PF00501 AMP-binding enzyme RJ36_RS11215 PF02803 Thiolase, C-terminal domain RJ36_RS11215 PF00108 Thiolase, N-terminal domain RJ36_RS11220 PF03061 Thioesterase superfamily RJ36_RS11225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RJ36_RS11225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RJ36_RS11225 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RJ36_RS11230 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS11235 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS11240 PF00970 Oxidoreductase FAD-binding domain RJ36_RS11240 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS11240 PF00175 Oxidoreductase NAD-binding domain RJ36_RS11245 PF01883 Iron-sulfur cluster assembly protein RJ36_RS11250 PF05138 Phenylacetic acid catabolic protein RJ36_RS11255 PF06243 Phenylacetic acid degradation B RJ36_RS11260 PF05138 Phenylacetic acid catabolic protein RJ36_RS11265 PF00171 Aldehyde dehydrogenase family RJ36_RS11265 PF01575 MaoC like domain RJ36_RS11270 PF01179 Copper amine oxidase, enzyme domain RJ36_RS11270 PF07833 Copper amine oxidase N-terminal domain RJ36_RS11270 PF02728 Copper amine oxidase, N3 domain RJ36_RS11270 PF02727 Copper amine oxidase, N2 domain RJ36_RS11275 PF00171 Aldehyde dehydrogenase family RJ36_RS11280 PF14525 AraC-binding-like domain RJ36_RS11280 PF12833 Helix-turn-helix domain RJ36_RS11285 PF07027 Protein of unknown function (DUF1318) RJ36_RS11290 PF13617 YnbE-like lipoprotein RJ36_RS11295 PF11739 Dicarboxylate transport RJ36_RS11300 PF00455 DeoR C terminal sensor domain RJ36_RS11300 PF08220 DeoR-like helix-turn-helix domain RJ36_RS11305 PF02502 Ribose/Galactose Isomerase RJ36_RS11310 PF03611 PTS system sugar-specific permease component RJ36_RS11315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS11325 PF01380 SIS domain RJ36_RS11330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RJ36_RS11330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RJ36_RS11340 PF04041 beta-1,4-mannooligosaccharide phosphorylase RJ36_RS11345 PF16657 Maltogenic Amylase, C-terminal domain RJ36_RS11345 PF00128 Alpha amylase, catalytic domain RJ36_RS11350 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11355 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11365 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS11370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RJ36_RS11370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RJ36_RS11370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RJ36_RS11370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RJ36_RS11375 PF00005 ABC transporter RJ36_RS11375 PF03459 TOBE domain RJ36_RS11375 PF17912 MalK OB fold domain RJ36_RS11380 PF03724 META domain RJ36_RS11385 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RJ36_RS11385 PF10371 Domain of unknown function RJ36_RS11385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS11385 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RJ36_RS11385 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RJ36_RS11390 PF00267 Gram-negative porin RJ36_RS11405 PF01841 Transglutaminase-like superfamily RJ36_RS11420 PF07166 Protein of unknown function (DUF1398) RJ36_RS11430 PF00665 Integrase core domain RJ36_RS11440 PF01848 Hok/gef family RJ36_RS11455 PF12167 Arm DNA-binding domain RJ36_RS11455 PF00589 Phage integrase family RJ36_RS11460 PF01171 PP-loop family RJ36_RS11465 PF00270 DEAD/DEAH box helicase RJ36_RS11465 PF00271 Helicase conserved C-terminal domain RJ36_RS11465 PF03880 DbpA RNA binding domain RJ36_RS11470 PF01544 CorA-like Mg2+ transporter protein RJ36_RS11475 PF00563 EAL domain RJ36_RS11475 PF03707 Bacterial signalling protein N terminal repeat RJ36_RS11475 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS11480 PF01418 Helix-turn-helix domain, rpiR family RJ36_RS11480 PF01380 SIS domain RJ36_RS11485 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RJ36_RS11490 PF02378 Phosphotransferase system, EIIC RJ36_RS11500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS11505 PF00246 Zinc carboxypeptidase RJ36_RS11510 PF13378 Enolase C-terminal domain-like RJ36_RS11510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RJ36_RS11515 PF08534 Redoxin RJ36_RS11520 PF18024 Helix-turn-helix domain RJ36_RS11520 PF00158 Sigma-54 interaction domain RJ36_RS11525 PF05128 Domain of unknown function (DUF697) RJ36_RS11530 PF04317 YcjX-like family, DUF463 RJ36_RS11535 PF09584 Phage shock protein PspD (Phageshock_PspD) RJ36_RS11540 PF04024 PspC domain RJ36_RS11545 PF06667 Phage shock protein B RJ36_RS11550 PF04012 PspA/IM30 family RJ36_RS11555 PF02954 Bacterial regulatory protein, Fis family RJ36_RS11555 PF00158 Sigma-54 interaction domain RJ36_RS11560 PF00149 Calcineurin-like phosphoesterase RJ36_RS11565 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS11585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS11590 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11595 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS11600 PF00005 ABC transporter RJ36_RS11605 PF00005 ABC transporter RJ36_RS11620 PF00575 S1 RNA binding domain RJ36_RS11620 PF00773 RNB domain RJ36_RS11620 PF08206 Ribonuclease B OB domain RJ36_RS11620 PF17876 Cold shock domain RJ36_RS11630 PF08220 DeoR-like helix-turn-helix domain RJ36_RS11630 PF00455 DeoR C terminal sensor domain RJ36_RS11635 PF05433 Glycine zipper 2TM domain RJ36_RS11640 PF01253 Translation initiation factor SUI1 RJ36_RS11645 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS11650 PF18073 Rubredoxin metal binding domain RJ36_RS11655 PF06305 Lipopolysaccharide assembly protein A domain RJ36_RS11660 PF01569 PAP2 superfamily RJ36_RS11665 PF00925 GTP cyclohydrolase II RJ36_RS11670 PF00005 ABC transporter RJ36_RS11670 PF03459 TOBE domain RJ36_RS11670 PF17912 MalK OB fold domain RJ36_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11680 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS11685 PF00330 Aconitase family (aconitate hydratase) RJ36_RS11685 PF00694 Aconitase C-terminal domain RJ36_RS11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS11690 PF03466 LysR substrate binding domain RJ36_RS11695 PF01131 DNA topoisomerase RJ36_RS11695 PF01751 Toprim domain RJ36_RS11695 PF01396 Topoisomerase DNA binding C4 zinc finger RJ36_RS11695 PF08272 Topoisomerase I zinc-ribbon-like RJ36_RS11705 PF10692 Protein of unknown function (DUF2498) RJ36_RS11710 PF08496 Peptidase family S49 N-terminal RJ36_RS11710 PF01343 Peptidase family S49 RJ36_RS11715 PF00106 short chain dehydrogenase RJ36_RS11720 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RJ36_RS11720 PF12557 Cob(I)alamin adenosyltransferase N terminal RJ36_RS11725 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS11725 PF00593 TonB dependent receptor RJ36_RS11730 PF01479 S4 domain RJ36_RS11730 PF00849 RNA pseudouridylate synthase RJ36_RS11735 PF01300 Telomere recombination RJ36_RS11740 PF02811 PHP domain RJ36_RS11745 PF04715 Anthranilate synthase component I, N terminal region RJ36_RS11745 PF00425 chorismate binding enzyme RJ36_RS11750 PF00591 Glycosyl transferase family, a/b domain RJ36_RS11750 PF02885 Glycosyl transferase family, helical bundle domain RJ36_RS11750 PF00117 Glutamine amidotransferase class-I RJ36_RS11755 PF00218 Indole-3-glycerol phosphate synthase RJ36_RS11755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RJ36_RS11760 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS11765 PF00290 Tryptophan synthase alpha chain RJ36_RS11770 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS11775 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS11780 PF03922 OmpW family RJ36_RS11790 PF04279 Intracellular septation protein A RJ36_RS11805 PF00239 Resolvase, N terminal domain RJ36_RS11805 PF02796 Helix-turn-helix domain of resolvase RJ36_RS11850 PF01638 HxlR-like helix-turn-helix RJ36_RS11960 PF03592 Terminase small subunit RJ36_RS11960 PF10668 Phage terminase small subunit RJ36_RS11975 PF03245 Bacteriophage Rz lysis protein RJ36_RS12005 PF05866 Endodeoxyribonuclease RusA RJ36_RS12010 PF07102 Protein of unknown function (DUF1364) RJ36_RS12020 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS12020 PF00072 Response regulator receiver domain RJ36_RS12035 PF05870 Phenolic acid decarboxylase (PAD) RJ36_RS12165 PF03061 Thioesterase superfamily RJ36_RS12170 PF14002 YniB-like protein RJ36_RS12175 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS12185 PF04307 LexA-binding, inner membrane-associated putative hydrolase RJ36_RS12190 PF00375 Sodium:dicarboxylate symporter family RJ36_RS12195 PF10729 Cell division activator CedA RJ36_RS12200 PF06628 Catalase-related immune-responsive RJ36_RS12200 PF18011 C-terminal domain found in long catalases RJ36_RS12200 PF00199 Catalase RJ36_RS12205 PF04794 YdjC-like protein RJ36_RS12210 PF11975 Family 4 glycosyl hydrolase C-terminal domain RJ36_RS12210 PF02056 Family 4 glycosyl hydrolase RJ36_RS12215 PF07883 Cupin domain RJ36_RS12215 PF12833 Helix-turn-helix domain RJ36_RS12220 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RJ36_RS12225 PF02378 Phosphotransferase system, EIIC RJ36_RS12230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS12235 PF04355 SmpA / OmlA family RJ36_RS12240 PF02540 NAD synthase RJ36_RS12245 PF07813 LTXXQ motif family protein RJ36_RS12250 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RJ36_RS12255 PF04996 Succinylarginine dihydrolase RJ36_RS12260 PF00171 Aldehyde dehydrogenase family RJ36_RS12265 PF04958 Arginine N-succinyltransferase beta subunit RJ36_RS12270 PF00202 Aminotransferase class-III RJ36_RS12280 PF03372 Endonuclease/Exonuclease/phosphatase family RJ36_RS12285 PF09335 SNARE associated Golgi protein RJ36_RS12290 PF09335 SNARE associated Golgi protein RJ36_RS12295 PF13416 Bacterial extracellular solute-binding protein RJ36_RS12300 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS12305 PF00005 ABC transporter RJ36_RS12310 PF00581 Rhodanese-like domain RJ36_RS12320 PF01066 CDP-alcohol phosphatidyltransferase RJ36_RS12325 PF02627 Carboxymuconolactone decarboxylase family RJ36_RS12330 PF00293 NUDIX domain RJ36_RS12335 PF07383 Protein of unknown function (DUF1496) RJ36_RS12340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RJ36_RS12340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RJ36_RS12345 PF06889 Protein of unknown function (DUF1266) RJ36_RS12350 PF01131 DNA topoisomerase RJ36_RS12350 PF01751 Toprim domain RJ36_RS12355 PF00586 AIR synthase related protein, N-terminal domain RJ36_RS12355 PF02769 AIR synthase related protein, C-terminal domain RJ36_RS12360 PF01569 PAP2 superfamily RJ36_RS12365 PF00881 Nitroreductase family RJ36_RS12370 PF01343 Peptidase family S49 RJ36_RS12375 PF17763 Glutaminase/Asparaginase C-terminal domain RJ36_RS12375 PF00710 Asparaginase, N-terminal RJ36_RS12380 PF00857 Isochorismatase family RJ36_RS12395 PF07690 Major Facilitator Superfamily RJ36_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS12410 PF00005 ABC transporter RJ36_RS12415 PF00296 Luciferase-like monooxygenase RJ36_RS12425 PF00296 Luciferase-like monooxygenase RJ36_RS12430 PF00158 Sigma-54 interaction domain RJ36_RS12435 PF07023 Protein of unknown function (DUF1315) RJ36_RS12440 PF01641 SelR domain RJ36_RS12445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS12445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RJ36_RS12450 PF01263 Aldose 1-epimerase RJ36_RS12455 PF00248 Aldo/keto reductase family RJ36_RS12460 PF06629 MltA-interacting protein MipA RJ36_RS12465 PF06798 PrkA serine protein kinase C-terminal domain RJ36_RS12465 PF08298 PrkA AAA domain RJ36_RS12470 PF04285 Protein of unknown function (DUF444) RJ36_RS12475 PF00582 Universal stress protein family RJ36_RS12480 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS12480 PF17155 Gammaproteobacterial periplasmic sensor domain RJ36_RS12485 PF04073 Aminoacyl-tRNA editing domain RJ36_RS12490 PF04284 Protein of unknown function (DUF441) RJ36_RS12495 PF02311 AraC-like ligand binding domain RJ36_RS12495 PF12833 Helix-turn-helix domain RJ36_RS12500 PF07690 Major Facilitator Superfamily RJ36_RS12505 PF00117 Glutamine amidotransferase class-I RJ36_RS12505 PF06418 CTP synthase N-terminus RJ36_RS12510 PF04343 Protein of unknown function, DUF488 RJ36_RS12520 PF03891 Domain of unknown function (DUF333) RJ36_RS12525 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS12525 PF13185 GAF domain RJ36_RS12535 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS12540 PF10749 Protein of unknown function (DUF2534) RJ36_RS12545 PF09313 Domain of unknown function (DUF1971) RJ36_RS12550 PF09313 Domain of unknown function (DUF1971) RJ36_RS12555 PF08956 Domain of unknown function (DUF1869) RJ36_RS12565 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS12565 PF00593 TonB dependent receptor RJ36_RS12580 PF00180 Isocitrate/isopropylmalate dehydrogenase RJ36_RS12585 PF00849 RNA pseudouridylate synthase RJ36_RS12590 PF00293 NUDIX domain RJ36_RS12600 PF04356 Protein of unknown function (DUF489) RJ36_RS12605 PF00206 Lyase RJ36_RS12605 PF08328 Adenylosuccinate lyase C-terminal RJ36_RS12610 PF12792 CSS motif domain associated with EAL RJ36_RS12610 PF00563 EAL domain RJ36_RS12615 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS12615 PF00072 Response regulator receiver domain RJ36_RS12620 PF08918 PhoQ Sensor RJ36_RS12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS12625 PF08007 Cupin superfamily protein RJ36_RS12630 PF07687 Peptidase dimerisation domain RJ36_RS12630 PF01546 Peptidase family M20/M25/M40 RJ36_RS12635 PF08402 TOBE domain RJ36_RS12635 PF00005 ABC transporter RJ36_RS12640 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS12650 PF13416 Bacterial extracellular solute-binding protein RJ36_RS12655 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS12655 PF07702 UTRA domain RJ36_RS12660 PF02378 Phosphotransferase system, EIIC RJ36_RS12665 PF14310 Fibronectin type III-like domain RJ36_RS12665 PF01915 Glycosyl hydrolase family 3 C-terminal domain RJ36_RS12665 PF00933 Glycosyl hydrolase family 3 N terminal domain RJ36_RS12670 PF02146 Sir2 family RJ36_RS12675 PF00480 ROK family RJ36_RS12680 PF12704 MacB-like periplasmic core domain RJ36_RS12680 PF02687 FtsX-like permease family RJ36_RS12685 PF00005 ABC transporter RJ36_RS12690 PF02687 FtsX-like permease family RJ36_RS12690 PF12704 MacB-like periplasmic core domain RJ36_RS12695 PF01757 Acyltransferase family RJ36_RS12700 PF02559 CarD-like/TRCF domain RJ36_RS12700 PF00271 Helicase conserved C-terminal domain RJ36_RS12700 PF03461 TRCF domain RJ36_RS12700 PF17757 UvrB interaction domain RJ36_RS12700 PF00270 DEAD/DEAH box helicase RJ36_RS12705 PF00367 phosphotransferase system, EIIB RJ36_RS12705 PF02378 Phosphotransferase system, EIIC RJ36_RS12710 PF01026 TatD related DNase RJ36_RS12715 PF09115 DNA polymerase III, delta subunit, C terminal RJ36_RS12720 PF02223 Thymidylate kinase RJ36_RS12725 PF02618 YceG-like family RJ36_RS12730 PF01063 Amino-transferase class IV RJ36_RS12735 PF00109 Beta-ketoacyl synthase, N-terminal domain RJ36_RS12735 PF02801 Beta-ketoacyl synthase, C-terminal domain RJ36_RS12740 PF00550 Phosphopantetheine attachment site RJ36_RS12750 PF00698 Acyl transferase domain RJ36_RS12755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RJ36_RS12755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RJ36_RS12760 PF02504 Fatty acid synthesis protein RJ36_RS12765 PF01783 Ribosomal L32p protein family RJ36_RS12770 PF02620 Large ribosomal RNA subunit accumulation protein YceD RJ36_RS12775 PF02545 Maf-like protein RJ36_RS12780 PF00849 RNA pseudouridylate synthase RJ36_RS12780 PF01479 S4 domain RJ36_RS12785 PF12111 Polyribonucleotide phosphorylase C terminal RJ36_RS12785 PF00575 S1 RNA binding domain RJ36_RS12785 PF10150 Ribonuclease E/G family RJ36_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS12790 PF03466 LysR substrate binding domain RJ36_RS12795 PF07690 Major Facilitator Superfamily RJ36_RS12800 PF00669 Bacterial flagellin N-terminal helical region RJ36_RS12805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RJ36_RS12805 PF00460 Flagella basal body rod protein RJ36_RS12810 PF10135 Rod binding protein RJ36_RS12810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RJ36_RS12815 PF02119 Flagellar P-ring protein RJ36_RS12820 PF02107 Flagellar L-ring protein RJ36_RS12825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RJ36_RS12825 PF00460 Flagella basal body rod protein RJ36_RS12830 PF00460 Flagella basal body rod protein RJ36_RS12830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RJ36_RS12835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RJ36_RS12835 PF00460 Flagella basal body rod protein RJ36_RS12835 PF07559 Flagellar basal body protein FlaE RJ36_RS12840 PF13860 FlgD Ig-like domain RJ36_RS12840 PF03963 Flagellar hook capping protein - N-terminal region RJ36_RS12840 PF13861 FlgD Tudor-like domain RJ36_RS12845 PF00460 Flagella basal body rod protein RJ36_RS12845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RJ36_RS12850 PF00460 Flagella basal body rod protein RJ36_RS12855 PF13144 Chaperone for flagella basal body P-ring formation RJ36_RS12860 PF04316 Anti-sigma-28 factor, FlgM RJ36_RS12865 PF05130 FlgN protein RJ36_RS12870 PF03023 Lipid II flippase MurJ RJ36_RS12875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS12880 PF04337 Protein of unknown function, DUF480 RJ36_RS12885 PF13302 Acetyltransferase (GNAT) domain RJ36_RS12890 PF07690 Major Facilitator Superfamily RJ36_RS12895 PF07273 Protein of unknown function (DUF1439) RJ36_RS12900 PF01979 Amidohydrolase family RJ36_RS12905 PF06183 DinI-like family RJ36_RS12910 PF13991 BssS protein family RJ36_RS12915 PF01266 FAD dependent oxidoreductase RJ36_RS12920 PF00581 Rhodanese-like domain RJ36_RS12920 PF12368 Rhodanase C-terminal RJ36_RS12920 PF17773 UPF0176 acylphosphatase like domain RJ36_RS12925 PF03279 Bacterial lipid A biosynthesis acyltransferase RJ36_RS12930 PF07690 Major Facilitator Superfamily RJ36_RS12935 PF13984 MsyB protein RJ36_RS12940 PF07119 Protein of unknown function (DUF1375) RJ36_RS12945 PF00535 Glycosyl transferase family 2 RJ36_RS12950 PF04349 Periplasmic glucan biosynthesis protein, MdoG RJ36_RS12955 PF01757 Acyltransferase family RJ36_RS12960 PF01661 Macro domain RJ36_RS12975 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS12980 PF10627 Curli assembly protein CsgE RJ36_RS12985 PF03783 Curli production assembly/transport component CsgG RJ36_RS12995 PF10614 Type VIII secretion system (T8SS), CsgF protein RJ36_RS13000 PF06496 Protein of unknown function (DUF1097) RJ36_RS13005 PF02613 Nitrate reductase delta subunit RJ36_RS13010 PF02811 PHP domain RJ36_RS13015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RJ36_RS13025 PF03466 LysR substrate binding domain RJ36_RS13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13030 PF02678 Pirin RJ36_RS13030 PF05726 Pirin C-terminal cupin domain RJ36_RS13035 PF00857 Isochorismatase family RJ36_RS13045 PF02562 PhoH-like protein RJ36_RS13050 PF04261 Dyp-type peroxidase family RJ36_RS13055 PF13473 Cupredoxin-like domain RJ36_RS13055 PF09375 Imelysin RJ36_RS13060 PF03239 Iron permease FTR1 family RJ36_RS13065 PF00474 Sodium:solute symporter family RJ36_RS13070 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RJ36_RS13070 PF00171 Aldehyde dehydrogenase family RJ36_RS13070 PF14850 DNA-binding domain of Proline dehydrogenase RJ36_RS13070 PF01619 Proline dehydrogenase RJ36_RS13075 PF00691 OmpA family RJ36_RS13075 PF13677 Membrane MotB of proton-channel complex MotA/MotB RJ36_RS13080 PF00771 FHIPEP family RJ36_RS13095 PF00877 NlpC/P60 family RJ36_RS13100 PF01554 MatE RJ36_RS13110 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS13110 PF08362 YcdC-like protein, C-terminal region RJ36_RS13120 PF10685 Stress-induced bacterial acidophilic repeat motif RJ36_RS13125 PF01276 Orn/Lys/Arg decarboxylase, major domain RJ36_RS13125 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RJ36_RS13125 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RJ36_RS13130 PF13520 Amino acid permease RJ36_RS13140 PF00152 tRNA synthetases class II (D, K and N) RJ36_RS13140 PF01336 OB-fold nucleic acid binding domain RJ36_RS13145 PF03358 NADPH-dependent FMN reductase RJ36_RS13150 PF13993 YccJ-like protein RJ36_RS13155 PF00328 Histidine phosphatase superfamily (branch 2) RJ36_RS13160 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS13165 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS13170 PF00005 ABC transporter RJ36_RS13175 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS13180 PF00005 ABC transporter RJ36_RS13180 PF09383 NIL domain RJ36_RS13185 PF03180 NLPA lipoprotein RJ36_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS13195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RJ36_RS13195 PF02770 Acyl-CoA dehydrogenase, middle domain RJ36_RS13195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RJ36_RS13210 PF00296 Luciferase-like monooxygenase RJ36_RS13215 PF00005 ABC transporter RJ36_RS13220 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS13225 PF09084 NMT1/THI5 like RJ36_RS13230 PF06183 DinI-like family RJ36_RS13235 PF03466 LysR substrate binding domain RJ36_RS13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RJ36_RS13265 PF00289 Biotin carboxylase, N-terminal domain RJ36_RS13265 PF02785 Biotin carboxylase C-terminal domain RJ36_RS13270 PF09347 Domain of unknown function (DUF1989) RJ36_RS13280 PF08402 TOBE domain RJ36_RS13280 PF00005 ABC transporter RJ36_RS13300 PF00582 Universal stress protein family RJ36_RS13305 PF00005 ABC transporter RJ36_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS13325 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS13330 PF00202 Aminotransferase class-III RJ36_RS13335 PF01266 FAD dependent oxidoreductase RJ36_RS13340 PF00171 Aldehyde dehydrogenase family RJ36_RS13345 PF07883 Cupin domain RJ36_RS13345 PF01381 Helix-turn-helix RJ36_RS13350 PF07722 Peptidase C26 RJ36_RS13355 PF00120 Glutamine synthetase, catalytic domain RJ36_RS13360 PF00324 Amino acid permease RJ36_RS13370 PF02678 Pirin RJ36_RS13370 PF17954 Quercetinase C-terminal cupin domain RJ36_RS13375 PF03466 LysR substrate binding domain RJ36_RS13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13380 PF10820 Protein of unknown function (DUF2543) RJ36_RS13385 PF02567 Phenazine biosynthesis-like protein RJ36_RS13395 PF01042 Endoribonuclease L-PSP RJ36_RS13400 PF00849 RNA pseudouridylate synthase RJ36_RS13415 PF03797 Autotransporter beta-domain RJ36_RS13425 PF09857 Putative toxin of bacterial toxin-antitoxin pair RJ36_RS13430 PF13847 Methyltransferase domain RJ36_RS13435 PF08943 CsiD RJ36_RS13440 PF01266 FAD dependent oxidoreductase RJ36_RS13445 PF00171 Aldehyde dehydrogenase family RJ36_RS13450 PF00202 Aminotransferase class-III RJ36_RS13455 PF00324 Amino acid permease RJ36_RS13460 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS13460 PF07729 FCD domain RJ36_RS13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13465 PF03466 LysR substrate binding domain RJ36_RS13475 PF01361 Tautomerase enzyme RJ36_RS13480 PF06779 Uncharacterised MFS-type transporter YbfB RJ36_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13485 PF03466 LysR substrate binding domain RJ36_RS13490 PF01594 AI-2E family transporter RJ36_RS13495 PF00576 HIUase/Transthyretin family RJ36_RS13510 PF00117 Glutamine amidotransferase class-I RJ36_RS13515 PF12833 Helix-turn-helix domain RJ36_RS13515 PF02311 AraC-like ligand binding domain RJ36_RS13520 PF03466 LysR substrate binding domain RJ36_RS13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13545 PF04960 Glutaminase RJ36_RS13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13550 PF03466 LysR substrate binding domain RJ36_RS13560 PF03466 LysR substrate binding domain RJ36_RS13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13570 PF03918 Cytochrome C biogenesis protein RJ36_RS13575 PF08534 Redoxin RJ36_RS13580 PF01578 Cytochrome C assembly protein RJ36_RS13580 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RJ36_RS13585 PF03100 CcmE RJ36_RS13590 PF04995 Heme exporter protein D (CcmD) RJ36_RS13595 PF01578 Cytochrome C assembly protein RJ36_RS13600 PF03379 CcmB protein RJ36_RS13605 PF00005 ABC transporter RJ36_RS13610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RJ36_RS13610 PF00034 Cytochrome c RJ36_RS13615 PF05199 GMC oxidoreductase RJ36_RS13615 PF00732 GMC oxidoreductase RJ36_RS13620 PF13618 Gluconate 2-dehydrogenase subunit 3 RJ36_RS13625 PF07681 DoxX RJ36_RS13630 PF01717 Cobalamin-independent synthase, Catalytic domain RJ36_RS13645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS13650 PF01027 Inhibitor of apoptosis-promoting Bax1 RJ36_RS13655 PF04358 DsrC like protein RJ36_RS13660 PF00708 Acylphosphatase RJ36_RS13665 PF10672 S-adenosylmethionine-dependent methyltransferase RJ36_RS13665 PF17785 PUA-like domain RJ36_RS13670 PF08755 Hemimethylated DNA-binding protein YccV like RJ36_RS13675 PF03466 LysR substrate binding domain RJ36_RS13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13680 PF03060 Nitronate monooxygenase RJ36_RS13685 PF13380 CoA binding domain RJ36_RS13690 PF02142 MGS-like domain RJ36_RS13695 PF13361 UvrD-like helicase C-terminal domain RJ36_RS13695 PF12462 DNA helicase IV / RNA helicase N terminal RJ36_RS13695 PF00580 UvrD/REP helicase N-terminal domain RJ36_RS13700 PF03733 Inner membrane component domain RJ36_RS13705 PF12805 FUSC-like inner membrane protein yccS RJ36_RS13710 PF04994 TfoX C-terminal domain RJ36_RS13710 PF04993 TfoX N-terminal domain RJ36_RS13715 PF03846 Cell division inhibitor SulA RJ36_RS13720 PF00691 OmpA family RJ36_RS13720 PF01389 OmpA-like transmembrane domain RJ36_RS13725 PF17414 MatP C-terminal ribbon-helix-helix domain RJ36_RS13725 PF06303 MatP N-terminal domain RJ36_RS13730 PF13654 AAA domain RJ36_RS13730 PF05362 Lon protease (S16) C-terminal proteolytic domain RJ36_RS13735 PF07977 FabA-like domain RJ36_RS13740 PF03886 ABC-type transport auxiliary lipoprotein component RJ36_RS13745 PF02470 MlaD protein RJ36_RS13750 PF04403 Paraquat-inducible protein A RJ36_RS13755 PF16326 ABC transporter C-terminal domain RJ36_RS13755 PF12848 ABC transporter RJ36_RS13755 PF00005 ABC transporter RJ36_RS13760 PF10672 S-adenosylmethionine-dependent methyltransferase RJ36_RS13760 PF02926 THUMP domain RJ36_RS13760 PF01170 Putative RNA methylase family UPF0020 RJ36_RS13765 PF03473 MOSC domain RJ36_RS13765 PF03476 MOSC N-terminal beta barrel domain RJ36_RS13765 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS13770 PF07126 Cell-division protein ZapC RJ36_RS13775 PF01180 Dihydroorotate dehydrogenase RJ36_RS13780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS13780 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS13785 PF00419 Fimbrial protein RJ36_RS13790 PF00419 Fimbrial protein RJ36_RS13795 PF00419 Fimbrial protein RJ36_RS13800 PF00577 Outer membrane usher protein RJ36_RS13800 PF13954 PapC N-terminal domain RJ36_RS13800 PF13953 PapC C-terminal domain RJ36_RS13805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS13805 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS13810 PF00419 Fimbrial protein RJ36_RS13815 PF03358 NADPH-dependent FMN reductase RJ36_RS13820 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RJ36_RS13820 PF11940 Domain of unknown function (DUF3458) Ig-like fold RJ36_RS13820 PF01433 Peptidase family M1 domain RJ36_RS13825 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RJ36_RS13825 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RJ36_RS13830 PF01336 OB-fold nucleic acid binding domain RJ36_RS13830 PF00152 tRNA synthetases class II (D, K and N) RJ36_RS13835 PF00267 Gram-negative porin RJ36_RS13840 PF00155 Aminotransferase class I and II RJ36_RS13845 PF00753 Metallo-beta-lactamase superfamily RJ36_RS13850 PF05951 Bacterial protein of unknown function (DUF882) RJ36_RS13855 PF01471 Putative peptidoglycan binding domain RJ36_RS13855 PF03734 L,D-transpeptidase catalytic domain RJ36_RS13860 PF04310 MukB N-terminal RJ36_RS13860 PF16330 MukB hinge domain RJ36_RS13865 PF04288 MukE-like family RJ36_RS13870 PF17193 MukF C-terminal domain RJ36_RS13870 PF17192 MukF middle domain RJ36_RS13870 PF03882 MukF winged-helix domain RJ36_RS13875 PF13847 Methyltransferase domain RJ36_RS13880 PF02698 DUF218 domain RJ36_RS13885 PF01636 Phosphotransferase enzyme family RJ36_RS13890 PF02348 Cytidylyltransferase RJ36_RS13895 PF03966 Trm112p-like protein RJ36_RS13900 PF06224 Winged helix DNA-binding domain RJ36_RS13905 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RJ36_RS13910 PF00005 ABC transporter RJ36_RS13910 PF00664 ABC transporter transmembrane region RJ36_RS13915 PF03772 Competence protein RJ36_RS13915 PF00753 Metallo-beta-lactamase superfamily RJ36_RS13920 PF00216 Bacterial DNA-binding protein RJ36_RS13925 PF00575 S1 RNA binding domain RJ36_RS13930 PF02224 Cytidylate kinase RJ36_RS13935 PF01435 Peptidase family M48 RJ36_RS13940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RJ36_RS13945 PF00266 Aminotransferase class-V RJ36_RS13950 PF04239 Protein of unknown function (DUF421) RJ36_RS13955 PF18381 YcaO cyclodehydratase C-terminal domain RJ36_RS13955 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RJ36_RS13960 PF01226 Formate/nitrite transporter RJ36_RS13965 PF02901 Pyruvate formate lyase-like RJ36_RS13965 PF01228 Glycine radical RJ36_RS13970 PF04055 Radical SAM superfamily RJ36_RS13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS13975 PF03466 LysR substrate binding domain RJ36_RS13985 PF07690 Major Facilitator Superfamily RJ36_RS13990 PF04976 DMSO reductase anchor subunit (DmsC) RJ36_RS13995 PF13247 4Fe-4S dicluster domain RJ36_RS13995 PF12800 4Fe-4S binding domain RJ36_RS14000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS14000 PF00384 Molybdopterin oxidoreductase RJ36_RS14000 PF01568 Molydopterin dinucleotide binding domain RJ36_RS14005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJ36_RS14005 PF02403 Seryl-tRNA synthetase N-terminal domain RJ36_RS14010 PF12002 MgsA AAA+ ATPase C terminal RJ36_RS14010 PF16193 AAA C-terminal domain RJ36_RS14010 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS14015 PF03548 Outer membrane lipoprotein carrier protein LolA RJ36_RS14020 PF17854 FtsK alpha domain RJ36_RS14020 PF09397 Ftsk gamma domain RJ36_RS14020 PF01580 FtsK/SpoIIIE family RJ36_RS14020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RJ36_RS14025 PF01037 Lrp/AsnC ligand binding domain RJ36_RS14030 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS14035 PF00005 ABC transporter RJ36_RS14035 PF00664 ABC transporter transmembrane region RJ36_RS14040 PF00664 ABC transporter transmembrane region RJ36_RS14040 PF00005 ABC transporter RJ36_RS14045 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RJ36_RS14050 PF01176 Translation initiation factor 1A / IF-1 RJ36_RS14055 PF17871 AAA lid domain RJ36_RS14055 PF10431 C-terminal, D2-small domain, of ClpB protein RJ36_RS14055 PF02861 Clp amino terminal domain, pathogenicity island component RJ36_RS14055 PF07724 AAA domain (Cdc48 subfamily) RJ36_RS14055 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS14060 PF02617 ATP-dependent Clp protease adaptor protein ClpS RJ36_RS14065 PF00313 'Cold-shock' DNA-binding domain RJ36_RS14070 PF02687 FtsX-like permease family RJ36_RS14070 PF00005 ABC transporter RJ36_RS14070 PF12704 MacB-like periplasmic core domain RJ36_RS14075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS14080 PF04393 Protein of unknown function (DUF535) RJ36_RS14085 PF11398 Protein of unknown function (DUF2813) RJ36_RS14090 PF00230 Major intrinsic protein RJ36_RS14095 PF03956 Lysine exporter LysO RJ36_RS14100 PF03063 Prismane/CO dehydrogenase family RJ36_RS14105 PF00175 Oxidoreductase NAD-binding domain RJ36_RS14105 PF00970 Oxidoreductase FAD-binding domain RJ36_RS14105 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS14110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS14110 PF00205 Thiamine pyrophosphate enzyme, central domain RJ36_RS14110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS14115 PF01212 Beta-eliminating lyase RJ36_RS14120 PF13460 NAD(P)H-binding RJ36_RS14120 PF11066 Protein of unknown function (DUF2867) RJ36_RS14125 PF01370 NAD dependent epimerase/dehydratase family RJ36_RS14130 PF01510 N-acetylmuramoyl-L-alanine amidase RJ36_RS14135 PF01906 Putative heavy-metal-binding RJ36_RS14140 PF12883 Protein of unknown function (DUF3828) RJ36_RS14145 PF00005 ABC transporter RJ36_RS14150 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS14155 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14160 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14165 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS14170 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS14170 PF00989 PAS fold RJ36_RS14170 PF16736 Single Cache-like RJ36_RS14175 PF00072 Response regulator receiver domain RJ36_RS14175 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS14180 PF05958 tRNA (Uracil-5-)-methyltransferase RJ36_RS14185 PF10767 Protein of unknown function (DUF2593) RJ36_RS14190 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14200 PF08402 TOBE domain RJ36_RS14200 PF00005 ABC transporter RJ36_RS14205 PF13416 Bacterial extracellular solute-binding protein RJ36_RS14210 PF10722 Putative bacterial sensory transduction regulator RJ36_RS14215 PF18030 RimK PreATP-grasp domain RJ36_RS14215 PF08443 RimK-like ATP-grasp domain RJ36_RS14220 PF00881 Nitroreductase family RJ36_RS14225 PF07214 Protein of unknown function (DUF1418) RJ36_RS14230 PF00462 Glutaredoxin RJ36_RS14235 PF11045 Putative inner membrane protein of Enterobacteriaceae RJ36_RS14240 PF06826 Predicted Permease Membrane Region RJ36_RS14240 PF02080 TrkA-C domain RJ36_RS14245 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS14250 PF07690 Major Facilitator Superfamily RJ36_RS14260 PF07690 Major Facilitator Superfamily RJ36_RS14265 PF01569 PAP2 superfamily RJ36_RS14270 PF08220 DeoR-like helix-turn-helix domain RJ36_RS14270 PF00455 DeoR C terminal sensor domain RJ36_RS14285 PF00768 D-alanyl-D-alanine carboxypeptidase RJ36_RS14285 PF07943 Penicillin-binding protein 5, C-terminal domain RJ36_RS14290 PF00043 Glutathione S-transferase, C-terminal domain RJ36_RS14290 PF13417 Glutathione S-transferase, N-terminal domain RJ36_RS14295 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS14310 PF07995 Glucose / Sorbosone dehydrogenase RJ36_RS14315 PF10799 Biofilm formation protein (YliH/bssR) RJ36_RS14320 PF18693 TRAM domain RJ36_RS14320 PF04055 Radical SAM superfamily RJ36_RS14320 PF00919 Uncharacterized protein family UPF0004 RJ36_RS14330 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RJ36_RS14340 PF12911 N-terminal TM domain of oligopeptide transport permease C RJ36_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14345 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS14355 PF00005 ABC transporter RJ36_RS14355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RJ36_RS14360 PF01112 Asparaginase RJ36_RS14365 PF03453 MoeA N-terminal region (domain I and II) RJ36_RS14365 PF03454 MoeA C-terminal region (domain IV) RJ36_RS14365 PF00994 Probable molybdopterin binding domain RJ36_RS14370 PF00899 ThiF family RJ36_RS14375 PF00923 Transaldolase/Fructose-6-phosphate aldolase RJ36_RS14380 PF04055 Radical SAM superfamily RJ36_RS14385 PF01228 Glycine radical RJ36_RS14385 PF02901 Pyruvate formate lyase-like RJ36_RS14390 PF04754 Putative transposase, YhgA-like RJ36_RS14400 PF07350 Protein of unknown function (DUF1479) RJ36_RS14405 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS14410 PF07690 Major Facilitator Superfamily RJ36_RS14415 PF01055 Glycosyl hydrolases family 31 RJ36_RS14415 PF13802 Galactose mutarotase-like RJ36_RS14415 PF17137 Domain of unknown function (DUF5110) RJ36_RS14415 PF16338 Domain of unknown function (DUF4968) RJ36_RS14425 PF00005 ABC transporter RJ36_RS14425 PF12848 ABC transporter RJ36_RS14430 PF17969 L,D-transpeptidase C-terminal domain RJ36_RS14430 PF03734 L,D-transpeptidase catalytic domain RJ36_RS14435 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS14435 PF07702 UTRA domain RJ36_RS14440 PF00232 Glycosyl hydrolase family 1 RJ36_RS14445 PF03600 Citrate transporter RJ36_RS14450 PF01325 Iron dependent repressor, N-terminal DNA binding domain RJ36_RS14450 PF02742 Iron dependent repressor, metal binding and dimerisation domain RJ36_RS14460 PF00884 Sulfatase RJ36_RS14465 PF13505 Outer membrane protein beta-barrel domain RJ36_RS14470 PF00892 EamA-like transporter family RJ36_RS14475 PF00210 Ferritin-like domain RJ36_RS14480 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS14485 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14490 PF00005 ABC transporter RJ36_RS14495 PF00924 Mechanosensitive ion channel RJ36_RS14500 PF05971 RNA methyltransferase RJ36_RS14505 PF01613 Flavin reductase like domain RJ36_RS14510 PF07338 Protein of unknown function (DUF1471) RJ36_RS14525 PF00232 Glycosyl hydrolase family 1 RJ36_RS14530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RJ36_RS14530 PF00367 phosphotransferase system, EIIB RJ36_RS14530 PF02378 Phosphotransferase system, EIIC RJ36_RS14535 PF01975 Survival protein SurE RJ36_RS14550 PF00874 PRD domain RJ36_RS14550 PF03123 CAT RNA binding domain RJ36_RS14570 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS14570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS14575 PF00577 Outer membrane usher protein RJ36_RS14575 PF13953 PapC C-terminal domain RJ36_RS14575 PF13954 PapC N-terminal domain RJ36_RS14585 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS14585 PF00593 TonB dependent receptor RJ36_RS14590 PF13640 2OG-Fe(II) oxygenase superfamily RJ36_RS14590 PF18331 PKHD-type hydroxylase C-terminal domain RJ36_RS14595 PF01258 Prokaryotic dksA/traR C4-type zinc finger RJ36_RS14605 PF04717 Type VI secretion system, phage-baseplate injector RJ36_RS14610 PF00877 NlpC/P60 family RJ36_RS14610 PF01476 LysM domain RJ36_RS14635 PF02885 Glycosyl transferase family, helical bundle domain RJ36_RS14640 PF13307 Helicase C-terminal domain RJ36_RS14640 PF06733 DEAD_2 RJ36_RS14640 PF00270 DEAD/DEAH box helicase RJ36_RS14645 PF00271 Helicase conserved C-terminal domain RJ36_RS14645 PF00270 DEAD/DEAH box helicase RJ36_RS14650 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS14650 PF09209 Tetracyclin repressor-like, C-terminal domain RJ36_RS14655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS14660 PF00005 ABC transporter RJ36_RS14675 PF11076 Putative inner membrane protein YbhQ RJ36_RS14680 PF03372 Endonuclease/Exonuclease/phosphatase family RJ36_RS14685 PF13091 PLD-like domain RJ36_RS14690 PF03706 Lysylphosphatidylglycerol synthase TM region RJ36_RS14710 PF01027 Inhibitor of apoptosis-promoting Bax1 RJ36_RS14715 PF02391 MoaE protein RJ36_RS14720 PF02597 ThiS family RJ36_RS14725 PF01967 MoaC family RJ36_RS14730 PF00994 Probable molybdopterin binding domain RJ36_RS14735 PF06463 Molybdenum Cofactor Synthesis C RJ36_RS14735 PF04055 Radical SAM superfamily RJ36_RS14740 PF01933 Uncharacterised protein family UPF0052 RJ36_RS14745 PF08019 Phosphoethanolamine transferase EptA/EptB RJ36_RS14745 PF00884 Sulfatase RJ36_RS14750 PF00072 Response regulator receiver domain RJ36_RS14750 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS14755 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS14760 PF02151 UvrB/uvrC motif RJ36_RS14760 PF00271 Helicase conserved C-terminal domain RJ36_RS14760 PF17757 UvrB interaction domain RJ36_RS14760 PF12344 Ultra-violet resistance protein B RJ36_RS14760 PF04851 Type III restriction enzyme, res subunit RJ36_RS14765 PF00005 ABC transporter RJ36_RS14775 PF08241 Methyltransferase domain RJ36_RS14780 PF00155 Aminotransferase class I and II RJ36_RS14785 PF06968 Biotin and Thiamin Synthesis associated domain RJ36_RS14785 PF04055 Radical SAM superfamily RJ36_RS14790 PF00202 Aminotransferase class-III RJ36_RS14795 PF01161 Phosphatidylethanolamine-binding protein RJ36_RS14800 PF01095 Pectinesterase RJ36_RS14805 PF10282 Lactonase, 7-bladed beta-propeller RJ36_RS14810 PF03466 LysR substrate binding domain RJ36_RS14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS14815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RJ36_RS14825 PF00005 ABC transporter RJ36_RS14825 PF03459 TOBE domain RJ36_RS14830 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS14845 PF03459 TOBE domain RJ36_RS14850 PF00005 ABC transporter RJ36_RS14860 PF16363 GDP-mannose 4,6 dehydratase RJ36_RS14865 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RJ36_RS14865 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RJ36_RS14870 PF00288 GHMP kinases N terminal domain RJ36_RS14870 PF08544 GHMP kinases C terminal RJ36_RS14870 PF10509 Galactokinase galactose-binding signature RJ36_RS14875 PF01263 Aldose 1-epimerase RJ36_RS14880 PF00300 Histidine phosphatase superfamily (branch 1) RJ36_RS14885 PF00005 ABC transporter RJ36_RS14890 PF01032 FecCD transport family RJ36_RS14900 PF00593 TonB dependent receptor RJ36_RS14900 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS14905 PF00793 DAHP synthetase I family RJ36_RS14910 PF13985 YbgS-like protein RJ36_RS14915 PF01545 Cation efflux family RJ36_RS14920 PF04973 Nicotinamide mononucleotide transporter RJ36_RS14925 PF02445 Quinolinate synthetase A protein RJ36_RS14965 PF16331 TolA binding protein trimerisation RJ36_RS14965 PF13174 Tetratricopeptide repeat RJ36_RS14970 PF00691 OmpA family RJ36_RS14975 PF04052 TolB amino-terminal domain RJ36_RS14975 PF07676 WD40-like Beta Propeller Repeat RJ36_RS14980 PF06519 TolA C-terminal RJ36_RS14985 PF02472 Biopolymer transport protein ExbD/TolR RJ36_RS14990 PF01618 MotA/TolQ/ExbB proton channel family RJ36_RS14995 PF03061 Thioesterase superfamily RJ36_RS15000 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) RJ36_RS15005 PF02322 Cytochrome bd terminal oxidase subunit II RJ36_RS15010 PF01654 Cytochrome bd terminal oxidase subunit I RJ36_RS15015 PF09261 Alpha mannosidase middle domain RJ36_RS15015 PF07748 Glycosyl hydrolases family 38 C-terminal domain RJ36_RS15015 PF01074 Glycosyl hydrolases family 38 N-terminal domain RJ36_RS15020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS15020 PF02378 Phosphotransferase system, EIIC RJ36_RS15020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS15025 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS15025 PF07702 UTRA domain RJ36_RS15035 PF02629 CoA binding domain RJ36_RS15035 PF00549 CoA-ligase RJ36_RS15040 PF08442 ATP-grasp domain RJ36_RS15040 PF00549 CoA-ligase RJ36_RS15045 PF00364 Biotin-requiring enzyme RJ36_RS15045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RJ36_RS15045 PF02817 e3 binding domain RJ36_RS15050 PF00676 Dehydrogenase E1 component RJ36_RS15050 PF02779 Transketolase, pyrimidine binding domain RJ36_RS15050 PF16078 2-oxoglutarate dehydrogenase N-terminus RJ36_RS15050 PF16870 2-oxoglutarate dehydrogenase C-terminal RJ36_RS15055 PF13085 2Fe-2S iron-sulfur cluster binding domain RJ36_RS15060 PF02910 Fumarate reductase flavoprotein C-term RJ36_RS15060 PF00890 FAD binding domain RJ36_RS15065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RJ36_RS15070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RJ36_RS15075 PF00285 Citrate synthase, C-terminal domain RJ36_RS15080 PF05638 Type VI secretion system effector, Hcp RJ36_RS15085 PF01320 Colicin immunity protein / pyocin immunity protein RJ36_RS15090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RJ36_RS15090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RJ36_RS15090 PF06827 Zinc finger found in FPG and IleRS RJ36_RS15095 PF01470 Pyroglutamyl peptidase RJ36_RS15110 PF03746 LamB/YcsF family RJ36_RS15115 PF02626 Carboxyltransferase domain, subdomain A and B RJ36_RS15120 PF02682 Carboxyltransferase domain, subdomain C and D RJ36_RS15125 PF01784 NIF3 (NGG1p interacting factor 3) RJ36_RS15130 PF00854 POT family RJ36_RS15135 PF03441 FAD binding domain of DNA photolyase RJ36_RS15135 PF00875 DNA photolyase RJ36_RS15140 PF08349 Protein of unknown function (DUF1722) RJ36_RS15145 PF10725 Protein of unknown function (DUF2517) RJ36_RS15155 PF03814 Potassium-transporting ATPase A subunit RJ36_RS15165 PF02669 K+-transporting ATPase, c chain RJ36_RS15170 PF13493 Domain of unknown function (DUF4118) RJ36_RS15170 PF02702 Osmosensitive K+ channel His kinase sensor domain RJ36_RS15170 PF13492 GAF domain RJ36_RS15170 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS15175 PF00072 Response regulator receiver domain RJ36_RS15175 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS15180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RJ36_RS15180 PF01276 Orn/Lys/Arg decarboxylase, major domain RJ36_RS15180 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RJ36_RS15185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RJ36_RS15185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RJ36_RS15185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RJ36_RS15185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RJ36_RS15190 PF03925 SeqA protein C-terminal domain RJ36_RS15190 PF17206 SeqA protein N-terminal domain RJ36_RS15195 PF12697 Alpha/beta hydrolase family RJ36_RS15200 PF01402 Ribbon-helix-helix protein, copG family RJ36_RS15205 PF00258 Flavodoxin RJ36_RS15210 PF01475 Ferric uptake regulator family RJ36_RS15215 PF03466 LysR substrate binding domain RJ36_RS15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS15220 PF00890 FAD binding domain RJ36_RS15220 PF14537 Cytochrome c3 RJ36_RS15230 PF07690 Major Facilitator Superfamily RJ36_RS15235 PF13982 YbfN-like lipoprotein RJ36_RS15240 PF03573 outer membrane porin, OprD family RJ36_RS15245 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RJ36_RS15245 PF00749 tRNA synthetases class I (E and Q), catalytic domain RJ36_RS15250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RJ36_RS15250 PF00367 phosphotransferase system, EIIB RJ36_RS15250 PF02378 Phosphotransferase system, EIIC RJ36_RS15255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RJ36_RS15260 PF01979 Amidohydrolase family RJ36_RS15265 PF01047 MarR family RJ36_RS15265 PF00480 ROK family RJ36_RS15270 PF13344 Haloacid dehalogenase-like hydrolase RJ36_RS15275 PF13537 Glutamine amidotransferase domain RJ36_RS15275 PF00733 Asparagine synthase RJ36_RS15325 PF01494 FAD binding domain RJ36_RS15330 PF01938 TRAM domain RJ36_RS15330 PF00919 Uncharacterized protein family UPF0004 RJ36_RS15330 PF04055 Radical SAM superfamily RJ36_RS15335 PF02562 PhoH-like protein RJ36_RS15340 PF02130 Uncharacterized protein family UPF0054 RJ36_RS15345 PF00571 CBS domain RJ36_RS15345 PF03471 Transporter associated domain RJ36_RS15350 PF00795 Carbon-nitrogen hydrolase RJ36_RS15355 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS15360 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS15365 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS15370 PF00005 ABC transporter RJ36_RS15375 PF01156 Inosine-uridine preferring nucleoside hydrolase RJ36_RS15380 PF07295 Zinc-ribbon containing domain RJ36_RS15385 PF00133 tRNA synthetases class I (I, L, M and V) RJ36_RS15385 PF08264 Anticodon-binding domain of tRNA RJ36_RS15385 PF13603 Leucyl-tRNA synthetase, Domain 2 RJ36_RS15390 PF04390 Lipopolysaccharide-assembly RJ36_RS15395 PF14840 Processivity clamp loader gamma complex DNA pol III C-term RJ36_RS15395 PF06144 DNA polymerase III, delta subunit RJ36_RS15400 PF01467 Cytidylyltransferase-like RJ36_RS15405 PF00155 Aminotransferase class I and II RJ36_RS15410 PF00300 Histidine phosphatase superfamily (branch 1) RJ36_RS15420 PF02590 Predicted SPOUT methyltransferase RJ36_RS15425 PF03717 Penicillin-binding Protein dimerisation domain RJ36_RS15425 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS15430 PF01098 Cell cycle protein RJ36_RS15435 PF03330 Lytic transglycolase RJ36_RS15435 PF05036 Sporulation related domain RJ36_RS15440 PF00768 D-alanyl-D-alanine carboxypeptidase RJ36_RS15440 PF07943 Penicillin-binding protein 5, C-terminal domain RJ36_RS15445 PF04359 Protein of unknown function (DUF493) RJ36_RS15450 PF03099 Biotin/lipoate A/B protein ligase family RJ36_RS15455 PF03466 LysR substrate binding domain RJ36_RS15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS15460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RJ36_RS15460 PF04055 Radical SAM superfamily RJ36_RS15465 PF02416 mttA/Hcf106 family RJ36_RS15470 PF00795 Carbon-nitrogen hydrolase RJ36_RS15475 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RJ36_RS15480 PF00313 'Cold-shock' DNA-binding domain RJ36_RS15485 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP RJ36_RS15490 PF00873 AcrB/AcrD/AcrF family RJ36_RS15495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS15495 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS15520 PF03606 C4-dicarboxylate anaerobic carrier RJ36_RS15525 PF00445 Ribonuclease T2 family RJ36_RS15530 PF01272 Transcription elongation factor, GreA/GreB, C-term RJ36_RS15530 PF14760 Rnk N-terminus RJ36_RS15535 PF00582 Universal stress protein family RJ36_RS15540 PF13192 Thioredoxin domain RJ36_RS15540 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS15545 PF10417 C-terminal domain of 1-Cys peroxiredoxin RJ36_RS15545 PF00578 AhpC/TSA family RJ36_RS15550 PF13098 Thioredoxin-like domain RJ36_RS15555 PF03466 LysR substrate binding domain RJ36_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS15560 PF01507 Phosphoadenosine phosphosulfate reductase family RJ36_RS15560 PF11922 Domain of unknown function (DUF3440) RJ36_RS15565 PF02195 ParB-like nuclease domain RJ36_RS15570 PF00155 Aminotransferase class I and II RJ36_RS15575 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS15590 PF04328 Selenoprotein, putative RJ36_RS15595 PF02554 Carbon starvation protein CstA RJ36_RS15595 PF13722 5TM C-terminal transporter carbon starvation CstA RJ36_RS15600 PF03061 Thioesterase superfamily RJ36_RS15610 PF00550 Phosphopantetheine attachment site RJ36_RS15610 PF00857 Isochorismatase family RJ36_RS15615 PF00501 AMP-binding enzyme RJ36_RS15615 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS15620 PF00425 chorismate binding enzyme RJ36_RS15625 PF01497 Periplasmic binding protein RJ36_RS15630 PF05977 Transmembrane secretion effector RJ36_RS15635 PF01032 FecCD transport family RJ36_RS15640 PF01032 FecCD transport family RJ36_RS15645 PF00005 ABC transporter RJ36_RS15650 PF02706 Chain length determinant protein RJ36_RS15655 PF13439 Glycosyltransferase Family 4 RJ36_RS15655 PF00534 Glycosyl transferases group 1 RJ36_RS15660 PF00668 Condensation domain RJ36_RS15660 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS15660 PF00550 Phosphopantetheine attachment site RJ36_RS15660 PF00501 AMP-binding enzyme RJ36_RS15660 PF00975 Thioesterase domain RJ36_RS15665 PF03621 MbtH-like protein RJ36_RS15670 PF11806 Domain of unknown function (DUF3327) RJ36_RS15670 PF00756 Putative esterase RJ36_RS15675 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS15675 PF00593 TonB dependent receptor RJ36_RS15680 PF17837 4'-phosphopantetheinyl transferase N-terminal domain RJ36_RS15680 PF01648 4'-phosphopantetheinyl transferase superfamily RJ36_RS15685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS15690 PF03806 AbgT putative transporter family RJ36_RS15695 PF04107 Glutamate-cysteine ligase family 2(GCS2) RJ36_RS15700 PF09992 Phosphodiester glycosidase RJ36_RS15705 PF00690 Cation transporter/ATPase, N-terminus RJ36_RS15705 PF00689 Cation transporting ATPase, C-terminus RJ36_RS15710 PF06643 Protein of unknown function (DUF1158) RJ36_RS15720 PF12833 Helix-turn-helix domain RJ36_RS15725 PF12706 Beta-lactamase superfamily domain RJ36_RS15730 PF16295 Tetracyclin repressor-like, C-terminal domain RJ36_RS15730 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS15735 PF00155 Aminotransferase class I and II RJ36_RS15740 PF04237 YjbR RJ36_RS15745 PF00881 Nitroreductase family RJ36_RS15750 PF00924 Mechanosensitive ion channel RJ36_RS15755 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS15775 PF04717 Type VI secretion system, phage-baseplate injector RJ36_RS15780 PF00324 Amino acid permease RJ36_RS15785 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS15785 PF00593 TonB dependent receptor RJ36_RS15790 PF00892 EamA-like transporter family RJ36_RS15795 PF01966 HD domain RJ36_RS15800 PF00296 Luciferase-like monooxygenase RJ36_RS15805 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS15815 PF00005 ABC transporter RJ36_RS15820 PF00005 ABC transporter RJ36_RS15825 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS15830 PF00497 Bacterial extracellular solute-binding proteins, family 3 RJ36_RS15835 PF00106 short chain dehydrogenase RJ36_RS15840 PF02311 AraC-like ligand binding domain RJ36_RS15840 PF12833 Helix-turn-helix domain RJ36_RS15850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RJ36_RS15855 PF00890 FAD binding domain RJ36_RS15860 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS15870 PF01368 DHH family RJ36_RS15870 PF02833 DHHA2 domain RJ36_RS15885 PF00072 Response regulator receiver domain RJ36_RS15885 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS15890 PF00419 Fimbrial protein RJ36_RS15895 PF00419 Fimbrial protein RJ36_RS15900 PF13954 PapC N-terminal domain RJ36_RS15900 PF00577 Outer membrane usher protein RJ36_RS15900 PF13953 PapC C-terminal domain RJ36_RS15905 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS15905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS15915 PF00419 Fimbrial protein RJ36_RS15920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RJ36_RS15920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RJ36_RS15935 PF03797 Autotransporter beta-domain RJ36_RS15940 PF00367 phosphotransferase system, EIIB RJ36_RS15940 PF02378 Phosphotransferase system, EIIC RJ36_RS15940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RJ36_RS15945 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS15945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RJ36_RS15950 PF04307 LexA-binding, inner membrane-associated putative hydrolase RJ36_RS15955 PF09190 DALR domain RJ36_RS15955 PF01406 tRNA synthetases class I (C) catalytic domain RJ36_RS15960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RJ36_RS15965 PF00149 Calcineurin-like phosphoesterase RJ36_RS15970 PF00731 AIR carboxylase RJ36_RS15975 PF02222 ATP-grasp domain RJ36_RS15975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RJ36_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS15990 PF00005 ABC transporter RJ36_RS15990 PF09383 NIL domain RJ36_RS15995 PF03180 NLPA lipoprotein RJ36_RS16010 PF00005 ABC transporter RJ36_RS16015 PF13472 GDSL-like Lipase/Acylhydrolase family RJ36_RS16020 PF00106 short chain dehydrogenase RJ36_RS16025 PF00085 Thioredoxin RJ36_RS16030 PF03649 Uncharacterised protein family (UPF0014) RJ36_RS16035 PF00005 ABC transporter RJ36_RS16060 PF01145 SPFH domain / Band 7 family RJ36_RS16060 PF16200 C-terminal region of band_7 RJ36_RS16065 PF01957 NfeD-like C-terminal, partner-binding RJ36_RS16070 PF13411 MerR HTH family regulatory protein RJ36_RS16075 PF04055 Radical SAM superfamily RJ36_RS16080 PF06228 Haem utilisation ChuX/HutX RJ36_RS16090 PF00403 Heavy-metal-associated domain RJ36_RS16095 PF01963 TraB family RJ36_RS16100 PF04073 Aminoacyl-tRNA editing domain RJ36_RS16105 PF00149 Calcineurin-like phosphoesterase RJ36_RS16105 PF02872 5'-nucleotidase, C-terminal domain RJ36_RS16110 PF07690 Major Facilitator Superfamily RJ36_RS16115 PF00999 Sodium/hydrogen exchanger family RJ36_RS16115 PF02254 TrkA-N domain RJ36_RS16120 PF00294 pfkB family carbohydrate kinase RJ36_RS16125 PF07859 alpha/beta hydrolase fold RJ36_RS16130 PF00762 Ferrochelatase RJ36_RS16135 PF05191 Adenylate kinase, active site lid RJ36_RS16140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS16140 PF00183 Hsp90 protein RJ36_RS16145 PF13662 Toprim domain RJ36_RS16145 PF02132 RecR protein RJ36_RS16150 PF02575 YbaB/EbfC DNA-binding family RJ36_RS16155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RJ36_RS16155 PF12169 DNA polymerase III subunits gamma and tau domain III RJ36_RS16155 PF12170 DNA polymerase III tau subunit V interacting with alpha RJ36_RS16160 PF00156 Phosphoribosyl transferase domain RJ36_RS16165 PF04304 Protein of unknown function (DUF454) RJ36_RS16170 PF07445 Primosomal replication protein priC RJ36_RS16175 PF10689 Protein of unknown function (DUF2496) RJ36_RS16180 PF12795 Mechanosensitive ion channel porin domain RJ36_RS16180 PF12794 Mechanosensitive ion channel inner membrane domain 1 RJ36_RS16180 PF00924 Mechanosensitive ion channel RJ36_RS16185 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS16185 PF08361 MAATS-type transcriptional repressor, C-terminal region RJ36_RS16190 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS16190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS16195 PF00873 AcrB/AcrD/AcrF family RJ36_RS16200 PF10757 Biofilm formation regulator YbaJ RJ36_RS16205 PF05321 Haemolysin expression modulating protein RJ36_RS16210 PF12464 Maltose acetyltransferase RJ36_RS16210 PF14602 Hexapeptide repeat of succinyl-transferase RJ36_RS16215 PF10777 Inner membrane protein YlaC RJ36_RS16220 PF00155 Aminotransferase class I and II RJ36_RS16220 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS16230 PF00444 Ribosomal protein L36 RJ36_RS16235 PF01197 Ribosomal protein L31 RJ36_RS16245 PF03180 NLPA lipoprotein RJ36_RS16250 PF00005 ABC transporter RJ36_RS16250 PF09383 NIL domain RJ36_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS16260 PF00563 EAL domain RJ36_RS16260 PF12792 CSS motif domain associated with EAL RJ36_RS16270 PF07237 Protein of unknown function (DUF1428) RJ36_RS16295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RJ36_RS16300 PF09619 Type III secretion system lipoprotein chaperone (YscW) RJ36_RS16310 PF00909 Ammonium Transporter Family RJ36_RS16315 PF00543 Nitrogen regulatory protein P-II RJ36_RS16320 PF00005 ABC transporter RJ36_RS16320 PF00664 ABC transporter transmembrane region RJ36_RS16325 PF00664 ABC transporter transmembrane region RJ36_RS16325 PF00005 ABC transporter RJ36_RS16330 PF13404 AsnC-type helix-turn-helix domain RJ36_RS16330 PF01037 Lrp/AsnC ligand binding domain RJ36_RS16335 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS16345 PF12793 Sugar transport-related sRNA regulator N-term RJ36_RS16345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS16350 PF06508 Queuosine biosynthesis protein QueC RJ36_RS16365 PF13145 PPIC-type PPIASE domain RJ36_RS16370 PF00216 Bacterial DNA-binding protein RJ36_RS16375 PF02190 ATP-dependent protease La (LON) substrate-binding domain RJ36_RS16375 PF05362 Lon protease (S16) C-terminal proteolytic domain RJ36_RS16375 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS16380 PF10431 C-terminal, D2-small domain, of ClpB protein RJ36_RS16380 PF06689 ClpX C4-type zinc finger RJ36_RS16380 PF07724 AAA domain (Cdc48 subfamily) RJ36_RS16385 PF00574 Clp protease RJ36_RS16390 PF05697 Bacterial trigger factor protein (TF) RJ36_RS16390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJ36_RS16390 PF05698 Bacterial trigger factor protein (TF) C-terminus RJ36_RS16395 PF01722 BolA-like protein RJ36_RS16400 PF03923 Uncharacterized lipoprotein RJ36_RS16400 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RJ36_RS16405 PF07690 Major Facilitator Superfamily RJ36_RS16410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RJ36_RS16410 PF06481 COX Aromatic Rich Motif RJ36_RS16415 PF00115 Cytochrome C and Quinol oxidase polypeptide I RJ36_RS16420 PF00510 Cytochrome c oxidase subunit III RJ36_RS16425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RJ36_RS16430 PF01040 UbiA prenyltransferase family RJ36_RS16450 PF01614 Bacterial transcriptional regulator RJ36_RS16450 PF09339 IclR helix-turn-helix domain RJ36_RS16455 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RJ36_RS16455 PF01488 Shikimate / quinate 5-dehydrogenase RJ36_RS16455 PF08501 Shikimate dehydrogenase substrate binding domain RJ36_RS16460 PF00890 FAD binding domain RJ36_RS16470 PF00890 FAD binding domain RJ36_RS16480 PF07690 Major Facilitator Superfamily RJ36_RS16485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS16485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS16490 PF07690 Major Facilitator Superfamily RJ36_RS16495 PF04461 Protein of unknown function (DUF520) RJ36_RS16500 PF08546 Ketopantoate reductase PanE/ApbA C terminal RJ36_RS16500 PF02558 Ketopantoate reductase PanE/ApbA RJ36_RS16505 PF01965 DJ-1/PfpI family RJ36_RS16515 PF02378 Phosphotransferase system, EIIC RJ36_RS16520 PF02056 Family 4 glycosyl hydrolase RJ36_RS16520 PF11975 Family 4 glycosyl hydrolase C-terminal domain RJ36_RS16525 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RJ36_RS16530 PF07702 UTRA domain RJ36_RS16530 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS16535 PF02568 Thiamine biosynthesis protein (ThiI) RJ36_RS16535 PF02926 THUMP domain RJ36_RS16540 PF02609 Exonuclease VII small subunit RJ36_RS16545 PF00348 Polyprenyl synthetase RJ36_RS16550 PF02779 Transketolase, pyrimidine binding domain RJ36_RS16550 PF02780 Transketolase, C-terminal domain RJ36_RS16550 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RJ36_RS16555 PF00248 Aldo/keto reductase family RJ36_RS16560 PF04608 Phosphatidylglycerophosphatase A RJ36_RS16565 PF02769 AIR synthase related protein, C-terminal domain RJ36_RS16565 PF00586 AIR synthase related protein, N-terminal domain RJ36_RS16570 PF01029 NusB family RJ36_RS16575 PF00885 6,7-dimethyl-8-ribityllumazine synthase RJ36_RS16580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RJ36_RS16580 PF01872 RibD C-terminal domain RJ36_RS16585 PF03477 ATP cone domain RJ36_RS16590 PF11622 Protein of unknown function (DUF3251) RJ36_RS16595 PF03502 Nucleoside-specific channel-forming protein, Tsx RJ36_RS16600 PF01844 HNH endonuclease RJ36_RS16610 PF07549 SecD/SecF GG Motif RJ36_RS16610 PF02355 Protein export membrane protein RJ36_RS16615 PF02355 Protein export membrane protein RJ36_RS16615 PF13721 SecD export protein N-terminal TM region RJ36_RS16615 PF07549 SecD/SecF GG Motif RJ36_RS16620 PF02699 Preprotein translocase subunit RJ36_RS16625 PF01702 Queuine tRNA-ribosyltransferase RJ36_RS16630 PF02547 Queuosine biosynthesis protein RJ36_RS16635 PF04336 Acyl carrier protein phosphodiesterase RJ36_RS16640 PF10417 C-terminal domain of 1-Cys peroxiredoxin RJ36_RS16640 PF00578 AhpC/TSA family RJ36_RS16655 PF07969 Amidohydrolase family RJ36_RS16665 PF00857 Isochorismatase family RJ36_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS16670 PF03466 LysR substrate binding domain RJ36_RS16675 PF02903 Alpha amylase, N-terminal ig-like domain RJ36_RS16675 PF00128 Alpha amylase, catalytic domain RJ36_RS16680 PF00324 Amino acid permease RJ36_RS16685 PF05525 Branched-chain amino acid transport protein RJ36_RS16690 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS16690 PF11808 Phosphate regulon sensor protein PhoR RJ36_RS16690 PF00989 PAS fold RJ36_RS16695 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS16695 PF00072 Response regulator receiver domain RJ36_RS16700 PF12320 Type 5 capsule protein repressor C-terminal domain RJ36_RS16700 PF00149 Calcineurin-like phosphoesterase RJ36_RS16705 PF13476 AAA domain RJ36_RS16710 PF00480 ROK family RJ36_RS16715 PF04381 Putative exonuclease, RdgC RJ36_RS16720 PF06865 Pyrimidine/purine nucleoside phosphorylase RJ36_RS16725 PF07302 AroM protein RJ36_RS16730 PF16362 YaiA protein RJ36_RS16735 PF01202 Shikimate kinase RJ36_RS16740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RJ36_RS16745 PF14748 Pyrroline-5-carboxylate reductase dimerisation RJ36_RS16745 PF03807 NADP oxidoreductase coenzyme F420-dependent RJ36_RS16750 PF07769 psiF repeat RJ36_RS16755 PF00245 Alkaline phosphatase RJ36_RS16760 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS16770 PF00106 short chain dehydrogenase RJ36_RS16775 PF07690 Major Facilitator Superfamily RJ36_RS16785 PF01820 D-ala D-ala ligase N-terminus RJ36_RS16785 PF07478 D-ala D-ala ligase C-terminus RJ36_RS16790 PF10953 Protein of unknown function (DUF2754) RJ36_RS16795 PF10954 Protein of unknown function (DUF2755) RJ36_RS16800 PF07759 Protein of unknown function (DUF1615) RJ36_RS16805 PF05992 SbmA/BacA-like family RJ36_RS16810 PF00144 Beta-lactamase RJ36_RS16815 PF15977 Winged helix-turn-helix DNA binding RJ36_RS16820 PF03797 Autotransporter beta-domain RJ36_RS16825 PF00490 Delta-aminolevulinic acid dehydratase RJ36_RS16830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RJ36_RS16835 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS16840 PF00005 ABC transporter RJ36_RS16845 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RJ36_RS16850 PF02574 Homocysteine S-methyltransferase RJ36_RS16855 PF00324 Amino acid permease RJ36_RS16860 PF08007 Cupin superfamily protein RJ36_RS16865 PF00248 Aldo/keto reductase family RJ36_RS16870 PF00873 AcrB/AcrD/AcrF family RJ36_RS16875 PF13533 Biotin-lipoyl like RJ36_RS16880 PF00144 Beta-lactamase RJ36_RS16885 PF00267 Gram-negative porin RJ36_RS16895 PF00664 ABC transporter transmembrane region RJ36_RS16895 PF00005 ABC transporter RJ36_RS16895 PF03412 Peptidase C39 family RJ36_RS16910 PF03466 LysR substrate binding domain RJ36_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS16915 PF07690 Major Facilitator Superfamily RJ36_RS16925 PF00419 Fimbrial protein RJ36_RS16930 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS16930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS16935 PF00577 Outer membrane usher protein RJ36_RS16935 PF13954 PapC N-terminal domain RJ36_RS16935 PF13953 PapC C-terminal domain RJ36_RS16950 PF07995 Glucose / Sorbosone dehydrogenase RJ36_RS16955 PF00593 TonB dependent receptor RJ36_RS16955 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS16965 PF10636 Hemin uptake protein hemP RJ36_RS16970 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS16970 PF00593 TonB dependent receptor RJ36_RS16975 PF05171 Haemin-degrading HemS.ChuX domain RJ36_RS16980 PF01497 Periplasmic binding protein RJ36_RS16985 PF01032 FecCD transport family RJ36_RS16990 PF00005 ABC transporter RJ36_RS16995 PF03797 Autotransporter beta-domain RJ36_RS17000 PF07166 Protein of unknown function (DUF1398) RJ36_RS17005 PF04198 Putative sugar-binding domain RJ36_RS17015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS17020 PF03611 PTS system sugar-specific permease component RJ36_RS17025 PF00834 Ribulose-phosphate 3 epimerase family RJ36_RS17035 PF01380 SIS domain RJ36_RS17040 PF00854 POT family RJ36_RS17055 PF03960 ArsC family RJ36_RS17060 PF02040 Arsenical pump membrane protein RJ36_RS17065 PF01022 Bacterial regulatory protein, arsR family RJ36_RS17070 PF10685 Stress-induced bacterial acidophilic repeat motif RJ36_RS17075 PF05974 Domain of unknown function (DUF892) RJ36_RS17080 PF02464 Competence-damaged protein RJ36_RS17085 PF04239 Protein of unknown function (DUF421) RJ36_RS17095 PF04076 Bacterial OB fold (BOF) protein RJ36_RS17100 PF02028 BCCT, betaine/carnitine/choline family transporter RJ36_RS17105 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS17105 PF13977 BetI-type transcriptional repressor, C-terminal RJ36_RS17110 PF00171 Aldehyde dehydrogenase family RJ36_RS17115 PF00732 GMC oxidoreductase RJ36_RS17115 PF05199 GMC oxidoreductase RJ36_RS17130 PF00593 TonB dependent receptor RJ36_RS17130 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS17155 PF01966 HD domain RJ36_RS17165 PF13954 PapC N-terminal domain RJ36_RS17165 PF00577 Outer membrane usher protein RJ36_RS17165 PF13953 PapC C-terminal domain RJ36_RS17170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS17170 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS17180 PF00027 Cyclic nucleotide-binding domain RJ36_RS17180 PF13545 Crp-like helix-turn-helix domain RJ36_RS17190 PF00589 Phage integrase family RJ36_RS17205 PF00881 Nitroreductase family RJ36_RS17215 PF00893 Small Multidrug Resistance protein RJ36_RS17220 PF00893 Small Multidrug Resistance protein RJ36_RS17225 PF02901 Pyruvate formate lyase-like RJ36_RS17225 PF01228 Glycine radical RJ36_RS17230 PF04055 Radical SAM superfamily RJ36_RS17230 PF13187 4Fe-4S dicluster domain RJ36_RS17235 PF00072 Response regulator receiver domain RJ36_RS17235 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS17255 PF02447 GntP family permease RJ36_RS17260 PF03786 D-mannonate dehydratase (UxuA) RJ36_RS17275 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RJ36_RS17290 PF01381 Helix-turn-helix RJ36_RS17295 PF00561 alpha/beta hydrolase fold RJ36_RS17310 PF03466 LysR substrate binding domain RJ36_RS17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS17335 PF00701 Dihydrodipicolinate synthetase family RJ36_RS17345 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS17360 PF00171 Aldehyde dehydrogenase family RJ36_RS17365 PF00696 Amino acid kinase family RJ36_RS17365 PF01472 PUA domain RJ36_RS17370 PF00267 Gram-negative porin RJ36_RS17375 PF07417 Sigma factor-binding transcriptional regulator Crl RJ36_RS17380 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) RJ36_RS17385 PF00156 Phosphoribosyl transferase domain RJ36_RS17390 PF07687 Peptidase dimerisation domain RJ36_RS17390 PF01546 Peptidase family M20/M25/M40 RJ36_RS17395 PF13673 Acetyltransferase (GNAT) domain RJ36_RS17410 PF00817 impB/mucB/samB family RJ36_RS17410 PF11799 impB/mucB/samB family C-terminal domain RJ36_RS17410 PF11798 IMS family HHH motif RJ36_RS17415 PF04400 (Na+)-NQR maturation NqrM RJ36_RS17420 PF00111 2Fe-2S iron-sulfur cluster binding domain RJ36_RS17420 PF00970 Oxidoreductase FAD-binding domain RJ36_RS17420 PF00175 Oxidoreductase NAD-binding domain RJ36_RS17425 PF02508 Rnf-Nqr subunit, membrane protein RJ36_RS17430 PF02508 Rnf-Nqr subunit, membrane protein RJ36_RS17435 PF04205 FMN-binding domain RJ36_RS17440 PF03116 NQR2, RnfD, RnfE family RJ36_RS17445 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) RJ36_RS17445 PF11973 NQRA C-terminal domain RJ36_RS17450 PF03734 L,D-transpeptidase catalytic domain RJ36_RS17455 PF13230 Glutamine amidotransferases class-II RJ36_RS17460 PF13580 SIS domain RJ36_RS17465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RJ36_RS17465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RJ36_RS17465 PF09317 Domain of unknown function (DUF1974) RJ36_RS17465 PF02770 Acyl-CoA dehydrogenase, middle domain RJ36_RS17475 PF00795 Carbon-nitrogen hydrolase RJ36_RS17500 PF04717 Type VI secretion system, phage-baseplate injector RJ36_RS17505 PF05638 Type VI secretion system effector, Hcp RJ36_RS17515 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RJ36_RS17545 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE RJ36_RS17555 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS17555 PF07724 AAA domain (Cdc48 subfamily) RJ36_RS17555 PF17871 AAA lid domain RJ36_RS17555 PF10431 C-terminal, D2-small domain, of ClpB protein RJ36_RS17570 PF14331 ImcF-related N-terminal domain RJ36_RS17570 PF06761 Intracellular multiplication and human macrophage-killing RJ36_RS17570 PF06744 Type VI secretion protein IcmF C-terminal RJ36_RS17585 PF05638 Type VI secretion system effector, Hcp RJ36_RS17605 PF00929 Exonuclease RJ36_RS17610 PF00075 RNase H RJ36_RS17615 PF08241 Methyltransferase domain RJ36_RS17620 PF16123 Hydroxyacylglutathione hydrolase C-terminus RJ36_RS17620 PF00753 Metallo-beta-lactamase superfamily RJ36_RS17625 PF01476 LysM domain RJ36_RS17625 PF01464 Transglycosylase SLT domain RJ36_RS17630 PF08241 Methyltransferase domain RJ36_RS17635 PF03372 Endonuclease/Exonuclease/phosphatase family RJ36_RS17640 PF07690 Major Facilitator Superfamily RJ36_RS17645 PF03466 LysR substrate binding domain RJ36_RS17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS17650 PF00248 Aldo/keto reductase family RJ36_RS17690 PF09383 NIL domain RJ36_RS17690 PF00005 ABC transporter RJ36_RS17695 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS17700 PF03180 NLPA lipoprotein RJ36_RS17705 PF16358 RcsF lipoprotein RJ36_RS17710 PF18389 TrmO C-terminal domain RJ36_RS17710 PF01980 tRNA-methyltransferase O RJ36_RS17715 PF04073 Aminoacyl-tRNA editing domain RJ36_RS17715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RJ36_RS17715 PF03129 Anticodon binding domain RJ36_RS17720 PF04170 NlpE N-terminal domain RJ36_RS17720 PF17185 NlpE C-terminal OB domain RJ36_RS17725 PF00472 RF-1 domain RJ36_RS17730 PF07152 YaeQ protein RJ36_RS17735 PF06786 Uncharacterised protein family (UPF0253) RJ36_RS17740 PF07073 Modulator of Rho-dependent transcription termination (ROF) RJ36_RS17745 PF11734 TilS substrate C-terminal domain RJ36_RS17745 PF09179 TilS substrate binding domain RJ36_RS17745 PF01171 PP-loop family RJ36_RS17750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RJ36_RS17755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RJ36_RS17755 PF01276 Orn/Lys/Arg decarboxylase, major domain RJ36_RS17755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RJ36_RS17760 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RJ36_RS17765 PF02811 PHP domain RJ36_RS17765 PF01336 OB-fold nucleic acid binding domain RJ36_RS17765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RJ36_RS17765 PF14579 Helix-hairpin-helix motif RJ36_RS17765 PF07733 Bacterial DNA polymerase III alpha NTPase domain RJ36_RS17770 PF01351 Ribonuclease HII RJ36_RS17775 PF02684 Lipid-A-disaccharide synthetase RJ36_RS17780 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RJ36_RS17780 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS17785 PF07977 FabA-like domain RJ36_RS17790 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS17790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RJ36_RS17795 PF03938 Outer membrane protein (OmpH-like) RJ36_RS17800 PF01103 Surface antigen RJ36_RS17800 PF07244 Surface antigen variable number repeat RJ36_RS17805 PF02163 Peptidase family M50 RJ36_RS17805 PF17820 PDZ domain RJ36_RS17815 PF01255 Putative undecaprenyl diphosphate synthase RJ36_RS17820 PF13288 DXP reductoisomerase C-terminal domain RJ36_RS17820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RJ36_RS17820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RJ36_RS17825 PF01765 Ribosome recycling factor RJ36_RS17830 PF00696 Amino acid kinase family RJ36_RS17835 PF00889 Elongation factor TS RJ36_RS17840 PF00318 Ribosomal protein S2 RJ36_RS17845 PF00557 Metallopeptidase family M24 RJ36_RS17850 PF01909 Nucleotidyltransferase domain RJ36_RS17850 PF01966 HD domain RJ36_RS17850 PF01842 ACT domain RJ36_RS17850 PF08335 GlnD PII-uridylyltransferase RJ36_RS17855 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS17855 PF14602 Hexapeptide repeat of succinyl-transferase RJ36_RS17855 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RJ36_RS17860 PF11944 Protein of unknown function (DUF3461) RJ36_RS17865 PF13556 PucR C-terminal helix-turn-helix domain RJ36_RS17865 PF17853 GGDEF-like domain RJ36_RS17865 PF05651 Putative sugar diacid recognition RJ36_RS17870 PF00595 PDZ domain RJ36_RS17875 PF13286 Phosphohydrolase-associated domain RJ36_RS17875 PF01966 HD domain RJ36_RS17880 PF01048 Phosphorylase superfamily RJ36_RS17885 PF01497 Periplasmic binding protein RJ36_RS17890 PF03458 UPF0126 domain RJ36_RS17895 PF12276 Protein of unknown function (DUF3617) RJ36_RS17900 PF01521 Iron-sulphur cluster biosynthesis RJ36_RS17905 PF00654 Voltage gated chloride channel RJ36_RS17910 PF00202 Aminotransferase class-III RJ36_RS17915 PF01032 FecCD transport family RJ36_RS17920 PF01497 Periplasmic binding protein RJ36_RS17925 PF00005 ABC transporter RJ36_RS17930 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS17930 PF00593 TonB dependent receptor RJ36_RS17935 PF00912 Transglycosylase RJ36_RS17935 PF14814 Bifunctional transglycosylase second domain RJ36_RS17935 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS17935 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal RJ36_RS17940 PF00270 DEAD/DEAH box helicase RJ36_RS17940 PF04408 Helicase associated domain (HA2) RJ36_RS17940 PF08482 ATP-dependent helicase C-terminal RJ36_RS17940 PF00271 Helicase conserved C-terminal domain RJ36_RS17945 PF02834 LigT like Phosphoesterase RJ36_RS17950 PF03749 Sugar fermentation stimulation protein RE domain RJ36_RS17950 PF17746 SfsA N-terminal OB domain RJ36_RS17955 PF01258 Prokaryotic dksA/traR C4-type zinc finger RJ36_RS17960 PF00749 tRNA synthetases class I (E and Q), catalytic domain RJ36_RS17965 PF12627 Probable RNA and SrmB- binding site of polymerase A RJ36_RS17965 PF01743 Poly A polymerase head domain RJ36_RS17965 PF12626 Polymerase A arginine-rich C-terminus RJ36_RS17970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RJ36_RS17975 PF02548 Ketopantoate hydroxymethyltransferase RJ36_RS17980 PF02569 Pantoate-beta-alanine ligase RJ36_RS17985 PF04754 Putative transposase, YhgA-like RJ36_RS17990 PF02261 Aspartate decarboxylase RJ36_RS17995 PF01522 Polysaccharide deacetylase RJ36_RS18000 PF03610 PTS system fructose IIA component RJ36_RS18005 PF01061 ABC-2 type transporter RJ36_RS18010 PF00005 ABC transporter RJ36_RS18015 PF00484 Carbonic anhydrase RJ36_RS18020 PF00156 Phosphoribosyl transferase domain RJ36_RS18025 PF01011 PQQ enzyme repeat RJ36_RS18030 PF07732 Multicopper oxidase RJ36_RS18030 PF07731 Multicopper oxidase RJ36_RS18030 PF00394 Multicopper oxidase RJ36_RS18035 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) RJ36_RS18040 PF17284 Spermidine synthase tetramerisation domain RJ36_RS18045 PF02675 S-adenosylmethionine decarboxylase RJ36_RS18055 PF01306 LacY proton/sugar symporter RJ36_RS18060 PF16353 Domain of unknown function(DUF4981) RJ36_RS18060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RJ36_RS18060 PF02929 Beta galactosidase small chain RJ36_RS18060 PF00703 Glycosyl hydrolases family 2 RJ36_RS18060 PF02837 Glycosyl hydrolases family 2, sugar binding domain RJ36_RS18065 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS18070 PF06062 Uncharacterised protein family (UPF0231) RJ36_RS18075 PF00106 short chain dehydrogenase RJ36_RS18080 PF00330 Aconitase family (aconitate hydratase) RJ36_RS18080 PF06434 Aconitate hydratase 2 N-terminus RJ36_RS18080 PF11791 Aconitate B N-terminal domain RJ36_RS18085 PF11737 Protein of unknown function (DUF3300) RJ36_RS18095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJ36_RS18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS18100 PF02817 e3 binding domain RJ36_RS18100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RJ36_RS18100 PF00364 Biotin-requiring enzyme RJ36_RS18105 PF17831 Pyruvate dehydrogenase E1 component middle domain RJ36_RS18105 PF00456 Transketolase, thiamine diphosphate binding domain RJ36_RS18110 PF07729 FCD domain RJ36_RS18110 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS18115 PF00324 Amino acid permease RJ36_RS18125 PF04616 Glycosyl hydrolases family 43 RJ36_RS18125 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain RJ36_RS18130 PF17113 Regulatory signalling modulator protein AmpE RJ36_RS18135 PF01510 N-acetylmuramoyl-L-alanine amidase RJ36_RS18140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RJ36_RS18140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RJ36_RS18145 PF07963 Prokaryotic N-terminal methylation motif RJ36_RS18150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RJ36_RS18150 PF00437 Type II/IV secretion system protein RJ36_RS18155 PF00482 Type II secretion system (T2SS), protein F RJ36_RS18160 PF00478 IMP dehydrogenase / GMP reductase domain RJ36_RS18165 PF01121 Dephospho-CoA kinase RJ36_RS18170 PF07072 Cell division protein RJ36_RS18175 PF03884 DNA gyrase inhibitor YacG RJ36_RS18180 PF00293 NUDIX domain RJ36_RS18185 PF02810 SEC-C motif RJ36_RS18185 PF07517 SecA DEAD-like domain RJ36_RS18185 PF01043 SecA preprotein cross-linking domain RJ36_RS18185 PF07516 SecA Wing and Scaffold domain RJ36_RS18190 PF06558 Secretion monitor precursor protein (SecM) RJ36_RS18195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RJ36_RS18200 PF12327 FtsZ family, C-terminal domain RJ36_RS18200 PF00091 Tubulin/FtsZ family, GTPase domain RJ36_RS18205 PF02491 SHS2 domain inserted in FTSA RJ36_RS18210 PF08478 POTRA domain, FtsQ-type RJ36_RS18210 PF03799 Cell division protein FtsQ RJ36_RS18215 PF07478 D-ala D-ala ligase C-terminus RJ36_RS18215 PF01820 D-ala D-ala ligase N-terminus RJ36_RS18220 PF01225 Mur ligase family, catalytic domain RJ36_RS18220 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS18220 PF08245 Mur ligase middle domain RJ36_RS18225 PF04101 Glycosyltransferase family 28 C-terminal domain RJ36_RS18225 PF03033 Glycosyltransferase family 28 N-terminal domain RJ36_RS18230 PF01098 Cell cycle protein RJ36_RS18235 PF08245 Mur ligase middle domain RJ36_RS18235 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS18240 PF00953 Glycosyl transferase family 4 RJ36_RS18240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RJ36_RS18245 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS18245 PF08245 Mur ligase middle domain RJ36_RS18245 PF01225 Mur ligase family, catalytic domain RJ36_RS18250 PF01225 Mur ligase family, catalytic domain RJ36_RS18250 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS18250 PF08245 Mur ligase middle domain RJ36_RS18255 PF03717 Penicillin-binding Protein dimerisation domain RJ36_RS18255 PF00905 Penicillin binding protein transpeptidase domain RJ36_RS18260 PF04999 Cell division protein FtsL RJ36_RS18265 PF01795 MraW methylase family RJ36_RS18270 PF02381 MraZ protein, putative antitoxin-like RJ36_RS18275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RJ36_RS18275 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS18280 PF10369 Small subunit of acetolactate synthase RJ36_RS18285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS18285 PF00205 Thiamine pyrophosphate enzyme, central domain RJ36_RS18285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS18290 PF03466 LysR substrate binding domain RJ36_RS18295 PF08502 LeuA allosteric (dimerisation) domain RJ36_RS18295 PF00682 HMGL-like RJ36_RS18300 PF00180 Isocitrate/isopropylmalate dehydrogenase RJ36_RS18305 PF00330 Aconitase family (aconitate hydratase) RJ36_RS18310 PF00694 Aconitase C-terminal domain RJ36_RS18315 PF07690 Major Facilitator Superfamily RJ36_RS18320 PF12793 Sugar transport-related sRNA regulator N-term RJ36_RS18320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RJ36_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS18335 PF00005 ABC transporter RJ36_RS18340 PF09335 SNARE associated Golgi protein RJ36_RS18345 PF12833 Helix-turn-helix domain RJ36_RS18345 PF02311 AraC-like ligand binding domain RJ36_RS18350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RJ36_RS18355 PF02610 L-arabinose isomerase RJ36_RS18355 PF11762 L-arabinose isomerase C-terminal domain RJ36_RS18360 PF00596 Class II Aldolase and Adducin N-terminal domain RJ36_RS18370 PF03104 DNA polymerase family B, exonuclease domain RJ36_RS18370 PF00136 DNA polymerase family B RJ36_RS18375 PF18339 RapA N-terminal Tudor like domain 1 RJ36_RS18375 PF18337 RapA N-terminal Tudor like domain RJ36_RS18375 PF12137 RNA polymerase recycling family C-terminal RJ36_RS18375 PF00271 Helicase conserved C-terminal domain RJ36_RS18375 PF00176 SNF2 family N-terminal domain RJ36_RS18380 PF00849 RNA pseudouridylate synthase RJ36_RS18385 PF00226 DnaJ domain RJ36_RS18385 PF05099 Tellurite resistance protein TerB RJ36_RS18390 PF03968 OstA-like protein RJ36_RS18390 PF04453 LPS transport system D RJ36_RS18395 PF09312 SurA N-terminal domain RJ36_RS18395 PF00639 PPIC-type PPIASE domain RJ36_RS18400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RJ36_RS18405 PF00398 Ribosomal RNA adenine dimethylase RJ36_RS18410 PF04379 ApaG domain RJ36_RS18415 PF00149 Calcineurin-like phosphoesterase RJ36_RS18420 PF00186 Dihydrofolate reductase RJ36_RS18425 PF02254 TrkA-N domain RJ36_RS18425 PF00999 Sodium/hydrogen exchanger family RJ36_RS18430 PF02525 Flavodoxin-like fold RJ36_RS18435 PF06004 Bacterial protein of unknown function (DUF903) RJ36_RS18440 PF00083 Sugar (and other) transporter RJ36_RS18450 PF01494 FAD binding domain RJ36_RS18455 PF00766 Electron transfer flavoprotein FAD-binding domain RJ36_RS18455 PF01012 Electron transfer flavoprotein domain RJ36_RS18460 PF01012 Electron transfer flavoprotein domain RJ36_RS18465 PF02028 BCCT, betaine/carnitine/choline family transporter RJ36_RS18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RJ36_RS18470 PF02770 Acyl-CoA dehydrogenase, middle domain RJ36_RS18470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RJ36_RS18475 PF02515 CoA-transferase family III RJ36_RS18480 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS18480 PF00501 AMP-binding enzyme RJ36_RS18485 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS18490 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS18495 PF07180 CaiF/GrlA transcriptional regulator RJ36_RS18500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RJ36_RS18500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RJ36_RS18500 PF02142 MGS-like domain RJ36_RS18505 PF00117 Glutamine amidotransferase class-I RJ36_RS18505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RJ36_RS18510 PF01113 Dihydrodipicolinate reductase, N-terminus RJ36_RS18510 PF05173 Dihydrodipicolinate reductase, C-terminus RJ36_RS18515 PF01156 Inosine-uridine preferring nucleoside hydrolase RJ36_RS18520 PF02401 LytB protein RJ36_RS18525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJ36_RS18530 PF01252 Signal peptidase (SPase) II RJ36_RS18535 PF00133 tRNA synthetases class I (I, L, M and V) RJ36_RS18535 PF08264 Anticodon-binding domain of tRNA RJ36_RS18535 PF06827 Zinc finger found in FPG and IleRS RJ36_RS18540 PF06574 FAD synthetase RJ36_RS18540 PF01687 Riboflavin kinase RJ36_RS18545 PF01649 Ribosomal protein S20 RJ36_RS18550 PF03466 LysR substrate binding domain RJ36_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS18555 PF06965 Na+/H+ antiporter 1 RJ36_RS18560 PF01556 DnaJ C terminal domain RJ36_RS18560 PF00684 DnaJ central domain RJ36_RS18560 PF00226 DnaJ domain RJ36_RS18565 PF00012 Hsp70 protein RJ36_RS18570 PF10807 Protein of unknown function (DUF2541) RJ36_RS18575 PF03981 Ubiquinol-cytochrome C chaperone RJ36_RS18575 PF13099 Domain of unknown function (DUF3944) RJ36_RS18580 PF01184 GPR1/FUN34/yaaH family RJ36_RS18585 PF04754 Putative transposase, YhgA-like RJ36_RS18590 PF07690 Major Facilitator Superfamily RJ36_RS18595 PF00994 Probable molybdopterin binding domain RJ36_RS18600 PF00923 Transaldolase/Fructose-6-phosphate aldolase RJ36_RS18605 PF01235 Sodium:alanine symporter family RJ36_RS18610 PF03883 Peroxide stress protein YaaA RJ36_RS18615 PF10697 Protein of unknown function (DUF2502) RJ36_RS18620 PF14821 Threonine synthase N terminus RJ36_RS18620 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS18625 PF08544 GHMP kinases C terminal RJ36_RS18625 PF00288 GHMP kinases N terminal domain RJ36_RS18630 PF00696 Amino acid kinase family RJ36_RS18630 PF01842 ACT domain RJ36_RS18630 PF00742 Homoserine dehydrogenase RJ36_RS18630 PF03447 Homoserine dehydrogenase, NAD binding domain RJ36_RS18630 PF13840 ACT domain RJ36_RS18635 PF00588 SpoU rRNA Methylase family RJ36_RS18640 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS18640 PF00072 Response regulator receiver domain RJ36_RS18645 PF06123 Inner membrane protein CreD RJ36_RS18650 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS18650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS18650 PF00672 HAMP domain RJ36_RS18655 PF00072 Response regulator receiver domain RJ36_RS18655 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS18660 PF05981 CreA protein RJ36_RS18665 PF06445 GyrI-like small molecule binding domain RJ36_RS18665 PF12833 Helix-turn-helix domain RJ36_RS18670 PF00300 Histidine phosphatase superfamily (branch 1) RJ36_RS18675 PF01931 Protein of unknown function DUF84 RJ36_RS18680 PF01371 Trp repressor protein RJ36_RS18685 PF01464 Transglycosylase SLT domain RJ36_RS18685 PF14718 Soluble lytic murein transglycosylase L domain RJ36_RS18690 PF12848 ABC transporter RJ36_RS18690 PF00005 ABC transporter RJ36_RS18695 PF13521 AAA domain RJ36_RS18695 PF01381 Helix-turn-helix RJ36_RS18700 PF18073 Rubredoxin metal binding domain RJ36_RS18705 PF18429 Domain of unknown function (DUF5609) RJ36_RS18710 PF10144 Bacterial virulence factor haemolysin RJ36_RS18715 PF10437 Bacterial lipoate protein ligase C-terminus RJ36_RS18715 PF03099 Biotin/lipoate A/B protein ligase family RJ36_RS18725 PF01048 Phosphorylase superfamily RJ36_RS18730 PF01676 Metalloenzyme superfamily RJ36_RS18735 PF02885 Glycosyl transferase family, helical bundle domain RJ36_RS18735 PF00591 Glycosyl transferase family, a/b domain RJ36_RS18735 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RJ36_RS18740 PF01791 DeoC/LacD family aldolase RJ36_RS18745 PF11230 Protein of unknown function (DUF3029) RJ36_RS18750 PF04055 Radical SAM superfamily RJ36_RS18755 PF01773 Na+ dependent nucleoside transporter N-terminus RJ36_RS18755 PF07662 Na+ dependent nucleoside transporter C-terminus RJ36_RS18755 PF07670 Nucleoside recognition RJ36_RS18760 PF01026 TatD related DNase RJ36_RS18765 PF04972 BON domain RJ36_RS18770 PF16658 Class II release factor RF3, C-terminal domain RJ36_RS18770 PF00009 Elongation factor Tu GTP binding domain RJ36_RS18770 PF03144 Elongation factor Tu domain 2 RJ36_RS18775 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS18780 PF00583 Acetyltransferase (GNAT) family RJ36_RS18785 PF03603 DNA polymerase III psi subunit RJ36_RS18790 PF08468 Methyltransferase small domain N-terminal RJ36_RS18790 PF05175 Methyltransferase small domain RJ36_RS18810 PF07256 Protein of unknown function (DUF1435) RJ36_RS18815 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS18815 PF05230 MASE2 domain RJ36_RS18820 PF06276 Ferric iron reductase FhuF-like transporter RJ36_RS18820 PF11575 FhuF 2Fe-2S C-terminal domain RJ36_RS18825 PF02378 Phosphotransferase system, EIIC RJ36_RS18825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS18830 PF04073 Aminoacyl-tRNA editing domain RJ36_RS18835 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS18840 PF00196 Bacterial regulatory proteins, luxR family RJ36_RS18845 PF01494 FAD binding domain RJ36_RS18850 PF06738 Putative threonine/serine exporter RJ36_RS18855 PF12821 Threonine/Serine exporter, ThrE RJ36_RS18860 PF17948 DnaT DNA-binding domain RJ36_RS18865 PF01695 IstB-like ATP binding protein RJ36_RS18870 PF10696 Protein of unknown function (DUF2501) RJ36_RS18875 PF00884 Sulfatase RJ36_RS18880 PF00672 HAMP domain RJ36_RS18880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RJ36_RS18880 PF02203 Tar ligand binding domain homologue RJ36_RS18885 PF02615 Malate/L-lactate dehydrogenase RJ36_RS18905 PF01047 MarR family RJ36_RS18910 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS18915 PF00171 Aldehyde dehydrogenase family RJ36_RS18920 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RJ36_RS18925 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase RJ36_RS18930 PF01557 Fumarylacetoacetate (FAA) hydrolase family RJ36_RS18935 PF03328 HpcH/HpaI aldolase/citrate lyase family RJ36_RS18940 PF07690 Major Facilitator Superfamily RJ36_RS18945 PF12833 Helix-turn-helix domain RJ36_RS18950 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal RJ36_RS18950 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal RJ36_RS18955 PF01613 Flavin reductase like domain RJ36_RS18960 PF02554 Carbon starvation protein CstA RJ36_RS18960 PF13722 5TM C-terminal transporter carbon starvation CstA RJ36_RS18965 PF04328 Selenoprotein, putative RJ36_RS18970 PF07683 Cobalamin synthesis protein cobW C-terminal domain RJ36_RS18970 PF02492 CobW/HypB/UreG, nucleotide-binding domain RJ36_RS18985 PF02384 N-6 DNA Methylase RJ36_RS18990 PF01420 Type I restriction modification DNA specificity domain RJ36_RS19000 PF08845 Toxin SymE, type I toxin-antitoxin system RJ36_RS19005 PF12833 Helix-turn-helix domain RJ36_RS19005 PF02311 AraC-like ligand binding domain RJ36_RS19010 PF01810 LysE type translocator RJ36_RS19015 PF00171 Aldehyde dehydrogenase family RJ36_RS19020 PF04754 Putative transposase, YhgA-like RJ36_RS19025 PF04286 Protein of unknown function (DUF445) RJ36_RS19030 PF07470 Glycosyl Hydrolase Family 88 RJ36_RS19050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS19050 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS19060 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS19060 PF00155 Aminotransferase class I and II RJ36_RS19070 PF00579 tRNA synthetases class I (W and Y) RJ36_RS19085 PF06755 CbtA_toxin of type IV toxin-antitoxin system RJ36_RS19095 PF00665 Integrase core domain RJ36_RS19100 PF04851 Type III restriction enzyme, res subunit RJ36_RS19105 PF01555 DNA methylase RJ36_RS19115 PF13356 Arm DNA-binding domain RJ36_RS19115 PF00589 Phage integrase family RJ36_RS19125 PF00107 Zinc-binding dehydrogenase RJ36_RS19125 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS19135 PF05872 Bacterial protein of unknown function (DUF853) RJ36_RS19140 PF03739 Lipopolysaccharide export system permease LptF/LptG RJ36_RS19145 PF03739 Lipopolysaccharide export system permease LptF/LptG RJ36_RS19150 PF00883 Cytosol aminopeptidase family, catalytic domain RJ36_RS19150 PF02789 Cytosol aminopeptidase family, N-terminal domain RJ36_RS19155 PF04364 DNA polymerase III chi subunit, HolC RJ36_RS19160 PF08264 Anticodon-binding domain of tRNA RJ36_RS19160 PF00133 tRNA synthetases class I (I, L, M and V) RJ36_RS19160 PF10458 Valyl tRNA synthetase tRNA binding arm RJ36_RS19165 PF00583 Acetyltransferase (GNAT) family RJ36_RS19170 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RJ36_RS19175 PF06877 Regulator of ribonuclease activity B RJ36_RS19180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RJ36_RS19180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RJ36_RS19185 PF04074 YhcH/YjgK/YiaL RJ36_RS19190 PF00419 Fimbrial protein RJ36_RS19195 PF00419 Fimbrial protein RJ36_RS19200 PF13953 PapC C-terminal domain RJ36_RS19200 PF00577 Outer membrane usher protein RJ36_RS19200 PF13954 PapC N-terminal domain RJ36_RS19205 PF02753 Pili assembly chaperone PapD, C-terminal domain RJ36_RS19205 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RJ36_RS19210 PF00419 Fimbrial protein RJ36_RS19215 PF00419 Fimbrial protein RJ36_RS19220 PF00419 Fimbrial protein RJ36_RS19245 PF00005 ABC transporter RJ36_RS19245 PF00664 ABC transporter transmembrane region RJ36_RS19250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS19255 PF02687 FtsX-like permease family RJ36_RS19255 PF00005 ABC transporter RJ36_RS19255 PF12704 MacB-like periplasmic core domain RJ36_RS19260 PF02321 Outer membrane efflux protein RJ36_RS19265 PF02801 Beta-ketoacyl synthase, C-terminal domain RJ36_RS19265 PF00109 Beta-ketoacyl synthase, N-terminal domain RJ36_RS19305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RJ36_RS19305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RJ36_RS19310 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain RJ36_RS19310 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain RJ36_RS19315 PF01042 Endoribonuclease L-PSP RJ36_RS19320 PF00690 Cation transporter/ATPase, N-terminus RJ36_RS19320 PF00689 Cation transporting ATPase, C-terminus RJ36_RS19325 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS19330 PF02378 Phosphotransferase system, EIIC RJ36_RS19330 PF00367 phosphotransferase system, EIIB RJ36_RS19335 PF11941 Domain of unknown function (DUF3459) RJ36_RS19335 PF00128 Alpha amylase, catalytic domain RJ36_RS19340 PF03477 ATP cone domain RJ36_RS19340 PF13597 Anaerobic ribonucleoside-triphosphate reductase RJ36_RS19360 PF03466 LysR substrate binding domain RJ36_RS19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS19365 PF08279 HTH domain RJ36_RS19365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS19365 PF05043 Mga helix-turn-helix domain RJ36_RS19365 PF00874 PRD domain RJ36_RS19370 PF10282 Lactonase, 7-bladed beta-propeller RJ36_RS19375 PF07071 KDGP aldolase RJ36_RS19380 PF03841 L-seryl-tRNA selenium transferase RJ36_RS19385 PF01979 Amidohydrolase family RJ36_RS19415 PF10881 Protein of unknown function (DUF2726) RJ36_RS19420 PF07361 Cytochrome b562 RJ36_RS19425 PF01523 Putative modulator of DNA gyrase RJ36_RS19430 PF04751 Protein of unknown function (DUF615) RJ36_RS19440 PF08245 Mur ligase middle domain RJ36_RS19440 PF02875 Mur ligase family, glutamate ligase domain RJ36_RS19440 PF01225 Mur ligase family, catalytic domain RJ36_RS19445 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RJ36_RS19450 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS19455 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS19460 PF00005 ABC transporter RJ36_RS19465 PF13407 Periplasmic binding protein domain RJ36_RS19470 PF00719 Inorganic pyrophosphatase RJ36_RS19475 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RJ36_RS19480 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RJ36_RS19485 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like RJ36_RS19490 PF04357 TamB, inner membrane protein subunit of TAM complex RJ36_RS19495 PF01103 Surface antigen RJ36_RS19495 PF07244 Surface antigen variable number repeat RJ36_RS19495 PF17243 POTRA domain TamA domain 1 RJ36_RS19500 PF01625 Peptide methionine sulfoxide reductase RJ36_RS19505 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS19510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS19510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS19520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS19520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS19525 PF03471 Transporter associated domain RJ36_RS19525 PF00571 CBS domain RJ36_RS19525 PF01595 Cyclin M transmembrane N-terminal domain RJ36_RS19530 PF06526 Protein of unknown function (DUF1107) RJ36_RS19535 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RJ36_RS19540 PF00459 Inositol monophosphatase family RJ36_RS19545 PF00149 Calcineurin-like phosphoesterase RJ36_RS19545 PF02872 5'-nucleotidase, C-terminal domain RJ36_RS19550 PF01638 HxlR-like helix-turn-helix RJ36_RS19555 PF05368 NmrA-like family RJ36_RS19560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RJ36_RS19560 PF02805 Metal binding domain of Ada RJ36_RS19560 PF12833 Helix-turn-helix domain RJ36_RS19560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RJ36_RS19565 PF00892 EamA-like transporter family RJ36_RS19570 PF01814 Hemerythrin HHE cation binding domain RJ36_RS19570 PF04405 Domain of Unknown function (DUF542) RJ36_RS19575 PF00324 Amino acid permease RJ36_RS19580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RJ36_RS19580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RJ36_RS19585 PF08525 Opacity-associated protein A N-terminal motif RJ36_RS19585 PF04225 Opacity-associated protein A LysM-like domain RJ36_RS19595 PF01281 Ribosomal protein L9, N-terminal domain RJ36_RS19595 PF03948 Ribosomal protein L9, C-terminal domain RJ36_RS19600 PF01084 Ribosomal protein S18 RJ36_RS19605 PF00436 Single-strand binding protein family RJ36_RS19610 PF01250 Ribosomal protein S6 RJ36_RS19615 PF07338 Protein of unknown function (DUF1471) RJ36_RS19620 PF07274 Protein of unknown function (DUF1440) RJ36_RS19625 PF00596 Class II Aldolase and Adducin N-terminal domain RJ36_RS19630 PF01261 Xylose isomerase-like TIM barrel RJ36_RS19635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS19640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS19645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS19650 PF03611 PTS system sugar-specific permease component RJ36_RS19660 PF00455 DeoR C terminal sensor domain RJ36_RS19660 PF08220 DeoR-like helix-turn-helix domain RJ36_RS19665 PF00326 Prolyl oligopeptidase family RJ36_RS19670 PF07338 Protein of unknown function (DUF1471) RJ36_RS19675 PF07338 Protein of unknown function (DUF1471) RJ36_RS19680 PF18158 Adaptive response protein AidB N-terminal domain RJ36_RS19680 PF02770 Acyl-CoA dehydrogenase, middle domain RJ36_RS19680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RJ36_RS19685 PF00588 SpoU rRNA Methylase family RJ36_RS19685 PF08032 RNA 2'-O ribose methyltransferase substrate binding RJ36_RS19690 PF17876 Cold shock domain RJ36_RS19690 PF08461 Ribonuclease R winged-helix domain RJ36_RS19690 PF08206 Ribonuclease B OB domain RJ36_RS19690 PF00773 RNB domain RJ36_RS19690 PF00575 S1 RNA binding domain RJ36_RS19695 PF02082 Transcriptional regulator RJ36_RS19700 PF00709 Adenylosuccinate synthetase RJ36_RS19705 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) RJ36_RS19710 PF01145 SPFH domain / Band 7 family RJ36_RS19715 PF12221 Bacterial membrane protein N terminal RJ36_RS19715 PF01145 SPFH domain / Band 7 family RJ36_RS19720 PF13167 GTP-binding GTPase N-terminal RJ36_RS19720 PF01926 50S ribosome-binding GTPase RJ36_RS19720 PF16360 GTP-binding GTPase Middle Region RJ36_RS19725 PF17209 Hfq protein RJ36_RS19735 PF08676 MutL C terminal dimerisation domain RJ36_RS19735 PF01119 DNA mismatch repair protein, C-terminal domain RJ36_RS19740 PF01520 N-acetylmuramoyl-L-alanine amidase RJ36_RS19745 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RJ36_RS19750 PF01256 Carbohydrate kinase RJ36_RS19750 PF03853 YjeF-related protein N-terminus RJ36_RS19755 PF08331 Domain of unknown function (DUF1730) RJ36_RS19770 PF00929 Exonuclease RJ36_RS19775 PF03193 RsgA GTPase RJ36_RS19780 PF02666 Phosphatidylserine decarboxylase RJ36_RS19785 PF12795 Mechanosensitive ion channel porin domain RJ36_RS19785 PF12794 Mechanosensitive ion channel inner membrane domain 1 RJ36_RS19785 PF00924 Mechanosensitive ion channel RJ36_RS19790 PF13520 Amino acid permease RJ36_RS19795 PF00152 tRNA synthetases class II (D, K and N) RJ36_RS19800 PF00890 FAD binding domain RJ36_RS19800 PF02910 Fumarate reductase flavoprotein C-term RJ36_RS19805 PF13085 2Fe-2S iron-sulfur cluster binding domain RJ36_RS19805 PF13183 4Fe-4S dicluster domain RJ36_RS19810 PF02300 Fumarate reductase subunit C RJ36_RS19815 PF02313 Fumarate reductase subunit D RJ36_RS19820 PF00144 Beta-lactamase RJ36_RS19825 PF08212 Lipocalin-like domain RJ36_RS19830 PF00893 Small Multidrug Resistance protein RJ36_RS19835 PF08085 Entericidin EcnA/B family RJ36_RS19840 PF08085 Entericidin EcnA/B family RJ36_RS19845 PF09285 Elongation factor P, C-terminal RJ36_RS19845 PF08207 Elongation factor P (EF-P) KOW-like domain RJ36_RS19845 PF01132 Elongation factor P (EF-P) OB domain RJ36_RS19850 PF04055 Radical SAM superfamily RJ36_RS19855 PF15922 YjeJ-like RJ36_RS19860 PF13698 Domain of unknown function (DUF4156) RJ36_RS19865 PF00118 TCP-1/cpn60 chaperonin family RJ36_RS19870 PF00166 Chaperonin 10 Kd subunit RJ36_RS19875 PF13520 Amino acid permease RJ36_RS19880 PF04186 FxsA cytoplasmic membrane protein RJ36_RS19885 PF00206 Lyase RJ36_RS19885 PF10415 Fumarase C C-terminus RJ36_RS19890 PF03605 Anaerobic c4-dicarboxylate membrane transporter RJ36_RS19895 PF03091 CutA1 divalent ion tolerance protein RJ36_RS19900 PF02683 Cytochrome C biogenesis protein transmembrane region RJ36_RS19900 PF11412 Disulphide bond corrector protein DsbC RJ36_RS19945 PF02321 Outer membrane efflux protein RJ36_RS19950 PF00664 ABC transporter transmembrane region RJ36_RS19950 PF00005 ABC transporter RJ36_RS19950 PF03412 Peptidase C39 family RJ36_RS19955 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS19955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS19970 PF00563 EAL domain RJ36_RS19970 PF13188 PAS domain RJ36_RS19970 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS19970 PF03707 Bacterial signalling protein N terminal repeat RJ36_RS19990 PF00005 ABC transporter RJ36_RS19990 PF03412 Peptidase C39 family RJ36_RS19990 PF00664 ABC transporter transmembrane region RJ36_RS20005 PF00501 AMP-binding enzyme RJ36_RS20015 PF00550 Phosphopantetheine attachment site RJ36_RS20020 PF00155 Aminotransferase class I and II RJ36_RS20025 PF03739 Lipopolysaccharide export system permease LptF/LptG RJ36_RS20030 PF03739 Lipopolysaccharide export system permease LptF/LptG RJ36_RS20035 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) RJ36_RS20045 PF01943 Polysaccharide biosynthesis protein RJ36_RS20065 PF01384 Phosphate transporter family RJ36_RS20070 PF00083 Sugar (and other) transporter RJ36_RS20070 PF08946 Osmosensory transporter coiled coil RJ36_RS20075 PF03812 2-keto-3-deoxygluconate permease RJ36_RS20080 PF03831 PhnA domain RJ36_RS20080 PF08274 PhnA Zinc-Ribbon RJ36_RS20085 PF06983 3-demethylubiquinone-9 3-methyltransferase RJ36_RS20090 PF00005 ABC transporter RJ36_RS20100 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS20105 PF07702 UTRA domain RJ36_RS20105 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS20110 PF06754 Phosphonate metabolism protein PhnG RJ36_RS20115 PF05845 Bacterial phosphonate metabolism protein (PhnH) RJ36_RS20120 PF05861 Bacterial phosphonate metabolism protein (PhnI) RJ36_RS20125 PF06007 Phosphonate metabolism protein PhnJ RJ36_RS20130 PF00005 ABC transporter RJ36_RS20135 PF00005 ABC transporter RJ36_RS20140 PF07969 Amidohydrolase family RJ36_RS20150 PF00583 Acetyltransferase (GNAT) family RJ36_RS20155 PF12706 Beta-lactamase superfamily domain RJ36_RS20165 PF14864 Alkyl sulfatase C-terminal RJ36_RS20165 PF14863 Alkyl sulfatase dimerisation RJ36_RS20165 PF00753 Metallo-beta-lactamase superfamily RJ36_RS20170 PF17090 Uncharacterised protein family RJ36_RS20175 PF00529 HlyD membrane-fusion protein of T1SS RJ36_RS20175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RJ36_RS20180 PF04632 Fusaric acid resistance protein family RJ36_RS20185 PF02321 Outer membrane efflux protein RJ36_RS20190 PF00384 Molybdopterin oxidoreductase RJ36_RS20190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS20190 PF01568 Molydopterin dinucleotide binding domain RJ36_RS20195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS20195 PF01568 Molydopterin dinucleotide binding domain RJ36_RS20195 PF00384 Molybdopterin oxidoreductase RJ36_RS20200 PF00375 Sodium:dicarboxylate symporter family RJ36_RS20205 PF16177 Acetyl-coenzyme A synthetase N-terminus RJ36_RS20205 PF13193 AMP-binding enzyme C-terminal domain RJ36_RS20205 PF00501 AMP-binding enzyme RJ36_RS20210 PF04341 Protein of unknown function, DUF485 RJ36_RS20215 PF00474 Sodium:solute symporter family RJ36_RS20225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RJ36_RS20225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RJ36_RS20230 PF01848 Hok/gef family RJ36_RS20235 PF04172 LrgB-like family RJ36_RS20240 PF03788 LrgA family RJ36_RS20245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS20245 PF03466 LysR substrate binding domain RJ36_RS20250 PF00999 Sodium/hydrogen exchanger family RJ36_RS20255 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS20260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS20270 PF03611 PTS system sugar-specific permease component RJ36_RS20275 PF00456 Transketolase, thiamine diphosphate binding domain RJ36_RS20280 PF02780 Transketolase, C-terminal domain RJ36_RS20280 PF02779 Transketolase, pyrimidine binding domain RJ36_RS20280 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RJ36_RS20285 PF00860 Permease family RJ36_RS20295 PF09278 MerR, DNA binding RJ36_RS20295 PF00376 MerR family regulatory protein RJ36_RS20300 PF12833 Helix-turn-helix domain RJ36_RS20305 PF15940 Family of unknown function RJ36_RS20310 PF00436 Single-strand binding protein family RJ36_RS20315 PF17755 UvrA DNA-binding domain RJ36_RS20315 PF17760 UvrA interaction domain RJ36_RS20315 PF00005 ABC transporter RJ36_RS20320 PF04237 YjbR RJ36_RS20325 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) RJ36_RS20330 PF00155 Aminotransferase class I and II RJ36_RS20335 PF01168 Alanine racemase, N-terminal domain RJ36_RS20335 PF00842 Alanine racemase, C-terminal domain RJ36_RS20340 PF00772 DnaB-like helicase N terminal domain RJ36_RS20340 PF03796 DnaB-like helicase C terminal domain RJ36_RS20355 PF00107 Zinc-binding dehydrogenase RJ36_RS20355 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS20360 PF09583 Phage shock protein G (Phageshock_PspG) RJ36_RS20365 PF01207 Dihydrouridine synthase (Dus) RJ36_RS20375 PF01475 Ferric uptake regulator family RJ36_RS20380 PF05532 CsbD-like RJ36_RS20385 PF01554 MatE RJ36_RS20390 PF01726 LexA DNA binding domain RJ36_RS20390 PF00717 Peptidase S24-like RJ36_RS20395 PF01219 Prokaryotic diacylglycerol kinase RJ36_RS20400 PF01553 Acyltransferase RJ36_RS20405 PF01040 UbiA prenyltransferase family RJ36_RS20410 PF04345 Chorismate lyase RJ36_RS20415 PF07148 Maltose operon periplasmic protein precursor (MalM) RJ36_RS20420 PF02264 LamB porin RJ36_RS20425 PF00005 ABC transporter RJ36_RS20425 PF17912 MalK OB fold domain RJ36_RS20430 PF01547 Bacterial extracellular solute-binding protein RJ36_RS20435 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS20435 PF14785 Maltose transport system permease protein MalF P2 domain RJ36_RS20440 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS20445 PF06146 Phosphate-starvation-inducible E RJ36_RS20450 PF06082 Exopolysaccharide biosynthesis protein YbjH RJ36_RS20455 PF06251 Capsule biosynthesis GfcC RJ36_RS20460 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF RJ36_RS20470 PF00342 Phosphoglucose isomerase RJ36_RS20480 PF01842 ACT domain RJ36_RS20480 PF00696 Amino acid kinase family RJ36_RS20485 PF01758 Sodium Bile acid symporter family RJ36_RS20500 PF11656 YjbD family (DUF3811) RJ36_RS20505 PF00849 RNA pseudouridylate synthase RJ36_RS20505 PF01479 S4 domain RJ36_RS20510 PF04198 Putative sugar-binding domain RJ36_RS20510 PF13936 Helix-turn-helix domain RJ36_RS20515 PF00106 short chain dehydrogenase RJ36_RS20520 PF03610 PTS system fructose IIA component RJ36_RS20525 PF03830 PTS system sorbose subfamily IIB component RJ36_RS20530 PF03609 PTS system sorbose-specific iic component RJ36_RS20535 PF03613 PTS system mannose/fructose/sorbose family IID component RJ36_RS20540 PF00107 Zinc-binding dehydrogenase RJ36_RS20540 PF08240 Alcohol dehydrogenase GroES-like domain RJ36_RS20545 PF08501 Shikimate dehydrogenase substrate binding domain RJ36_RS20550 PF03575 Peptidase family S51 RJ36_RS20555 PF02690 Na+/Pi-cotransporter RJ36_RS20560 PF00809 Pterin binding enzyme RJ36_RS20560 PF02574 Homocysteine S-methyltransferase RJ36_RS20560 PF02607 B12 binding domain RJ36_RS20560 PF02310 B12 binding domain RJ36_RS20560 PF02965 Vitamin B12 dependent methionine synthase, activation domain RJ36_RS20565 PF09339 IclR helix-turn-helix domain RJ36_RS20565 PF01614 Bacterial transcriptional regulator RJ36_RS20570 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RJ36_RS20575 PF00463 Isocitrate lyase family RJ36_RS20580 PF01274 Malate synthase RJ36_RS20585 PF04204 Homoserine O-succinyltransferase RJ36_RS20590 PF13673 Acetyltransferase (GNAT) domain RJ36_RS20615 PF01808 AICARFT/IMPCHase bienzyme RJ36_RS20615 PF02142 MGS-like domain RJ36_RS20620 PF02844 Phosphoribosylglycinamide synthetase, N domain RJ36_RS20620 PF02843 Phosphoribosylglycinamide synthetase, C domain RJ36_RS20620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RJ36_RS20625 PF07356 Protein of unknown function (DUF1481) RJ36_RS20630 PF00216 Bacterial DNA-binding protein RJ36_RS20635 PF04222 Protein of unknown function (DUF416) RJ36_RS20640 PF04493 Endonuclease V RJ36_RS20645 PF01208 Uroporphyrinogen decarboxylase (URO-D) RJ36_RS20650 PF09297 NADH pyrophosphatase zinc ribbon domain RJ36_RS20650 PF00293 NUDIX domain RJ36_RS20655 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RJ36_RS20660 PF01964 Radical SAM ThiC family RJ36_RS20660 PF13667 ThiC-associated domain RJ36_RS20665 PF02581 Thiamine monophosphate synthase RJ36_RS20670 PF00899 ThiF family RJ36_RS20675 PF02597 ThiS family RJ36_RS20680 PF05690 Thiazole biosynthesis protein ThiG RJ36_RS20685 PF06968 Biotin and Thiamin Synthesis associated domain RJ36_RS20685 PF04055 Radical SAM superfamily RJ36_RS20690 PF00990 Diguanylate cyclase, GGDEF domain RJ36_RS20695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS20705 PF03605 Anaerobic c4-dicarboxylate membrane transporter RJ36_RS20710 PF04983 RNA polymerase Rpb1, domain 3 RJ36_RS20710 PF05000 RNA polymerase Rpb1, domain 4 RJ36_RS20710 PF04998 RNA polymerase Rpb1, domain 5 RJ36_RS20710 PF00623 RNA polymerase Rpb1, domain 2 RJ36_RS20710 PF04997 RNA polymerase Rpb1, domain 1 RJ36_RS20715 PF04561 RNA polymerase Rpb2, domain 2 RJ36_RS20715 PF04560 RNA polymerase Rpb2, domain 7 RJ36_RS20715 PF10385 RNA polymerase beta subunit external 1 domain RJ36_RS20715 PF04563 RNA polymerase beta subunit RJ36_RS20715 PF04565 RNA polymerase Rpb2, domain 3 RJ36_RS20715 PF00562 RNA polymerase Rpb2, domain 6 RJ36_RS20720 PF00542 Ribosomal protein L7/L12 C-terminal domain RJ36_RS20720 PF16320 Ribosomal protein L7/L12 dimerisation domain RJ36_RS20725 PF00466 Ribosomal protein L10 RJ36_RS20730 PF00687 Ribosomal protein L1p/L10e family RJ36_RS20735 PF03946 Ribosomal protein L11, N-terminal domain RJ36_RS20735 PF00298 Ribosomal protein L11, RNA binding domain RJ36_RS20740 PF02357 Transcription termination factor nusG RJ36_RS20740 PF00467 KOW motif RJ36_RS20745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RJ36_RS20750 PF03144 Elongation factor Tu domain 2 RJ36_RS20750 PF03143 Elongation factor Tu C-terminal domain RJ36_RS20750 PF00009 Elongation factor Tu GTP binding domain RJ36_RS20775 PF00485 Phosphoribulokinase / Uridine kinase family RJ36_RS20780 PF08279 HTH domain RJ36_RS20780 PF03099 Biotin/lipoate A/B protein ligase family RJ36_RS20780 PF02237 Biotin protein ligase C terminal domain RJ36_RS20785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RJ36_RS20785 PF01565 FAD binding domain RJ36_RS20805 PF12724 Flavodoxin domain RJ36_RS20810 PF02386 Cation transport protein RJ36_RS20815 PF01205 Uncharacterized protein family UPF0029 RJ36_RS20815 PF09186 Domain of unknown function (DUF1949) RJ36_RS20820 PF00557 Metallopeptidase family M24 RJ36_RS20825 PF00378 Enoyl-CoA hydratase/isomerase RJ36_RS20825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RJ36_RS20825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RJ36_RS20830 PF02803 Thiolase, C-terminal domain RJ36_RS20830 PF00108 Thiolase, N-terminal domain RJ36_RS20835 PF00970 Oxidoreductase FAD-binding domain RJ36_RS20835 PF00175 Oxidoreductase NAD-binding domain RJ36_RS20840 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RJ36_RS20845 PF02357 Transcription termination factor nusG RJ36_RS20850 PF01026 TatD related DNase RJ36_RS20855 PF00902 Sec-independent protein translocase protein (TatC) RJ36_RS20865 PF02416 mttA/Hcf106 family RJ36_RS20870 PF03109 ABC1 family RJ36_RS20875 PF02036 SCP-2 sterol transfer family RJ36_RS20880 PF01209 ubiE/COQ5 methyltransferase family RJ36_RS20885 PF02646 RmuC family RJ36_RS20890 PF01048 Phosphorylase superfamily RJ36_RS20895 PF01738 Dienelactone hydrolase family RJ36_RS20900 PF01717 Cobalamin-independent synthase, Catalytic domain RJ36_RS20900 PF08267 Cobalamin-independent synthase, N-terminal domain RJ36_RS20910 PF03466 LysR substrate binding domain RJ36_RS20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS20915 PF00892 EamA-like transporter family RJ36_RS20925 PF12146 Serine aminopeptidase, S33 RJ36_RS20930 PF01810 LysE type translocator RJ36_RS20935 PF04754 Putative transposase, YhgA-like RJ36_RS20940 PF01810 LysE type translocator RJ36_RS20945 PF16124 RecQ zinc-binding RJ36_RS20945 PF00570 HRDC domain RJ36_RS20945 PF09382 RQC domain RJ36_RS20945 PF00270 DEAD/DEAH box helicase RJ36_RS20945 PF00271 Helicase conserved C-terminal domain RJ36_RS20950 PF02253 Phospholipase A1 RJ36_RS20955 PF03061 Thioesterase superfamily RJ36_RS20960 PF00892 EamA-like transporter family RJ36_RS20965 PF01544 CorA-like Mg2+ transporter protein RJ36_RS20970 PF00580 UvrD/REP helicase N-terminal domain RJ36_RS20970 PF13361 UvrD-like helicase C-terminal domain RJ36_RS20975 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS20980 PF00589 Phage integrase family RJ36_RS20980 PF02899 Phage integrase, N-terminal SAM-like domain RJ36_RS20985 PF04340 Protein of unknown function, DUF484 RJ36_RS20990 PF01678 Diaminopimelate epimerase RJ36_RS20995 PF13627 Prokaryotic lipoprotein-attachment site RJ36_RS21000 PF01491 Frataxin-like domain RJ36_RS21010 PF01295 Adenylate cyclase, class-I RJ36_RS21010 PF12633 Adenylate cyclase NT domain RJ36_RS21015 PF03900 Porphobilinogen deaminase, C-terminal domain RJ36_RS21015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RJ36_RS21020 PF02602 Uroporphyrinogen-III synthase HemD RJ36_RS21025 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase RJ36_RS21030 PF07719 Tetratricopeptide repeat RJ36_RS21030 PF07219 HemY protein N-terminus RJ36_RS21035 PF00884 Sulfatase RJ36_RS21040 PF13186 Iron-sulfur cluster-binding domain RJ36_RS21040 PF04055 Radical SAM superfamily RJ36_RS21065 PF00324 Amino acid permease RJ36_RS21070 PF03808 Glycosyl transferase WecB/TagA/CpsF family RJ36_RS21075 PF06899 WzyE protein, O-antigen assembly polymerase RJ36_RS21080 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 RJ36_RS21085 PF01943 Polysaccharide biosynthesis protein RJ36_RS21090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RJ36_RS21100 PF00483 Nucleotidyl transferase RJ36_RS21105 PF16363 GDP-mannose 4,6 dehydratase RJ36_RS21110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RJ36_RS21110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RJ36_RS21110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RJ36_RS21115 PF02350 UDP-N-acetylglucosamine 2-epimerase RJ36_RS21120 PF02706 Chain length determinant protein RJ36_RS21125 PF00953 Glycosyl transferase family 4 RJ36_RS21130 PF07498 Rho termination factor, N-terminal domain RJ36_RS21130 PF07497 Rho termination factor, RNA-binding domain RJ36_RS21130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJ36_RS21135 PF00085 Thioredoxin RJ36_RS21140 PF00270 DEAD/DEAH box helicase RJ36_RS21140 PF00271 Helicase conserved C-terminal domain RJ36_RS21145 PF02541 Ppx/GppA phosphatase family RJ36_RS21150 PF00580 UvrD/REP helicase N-terminal domain RJ36_RS21150 PF13361 UvrD-like helicase C-terminal domain RJ36_RS21165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RJ36_RS21165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RJ36_RS21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS21170 PF03466 LysR substrate binding domain RJ36_RS21175 PF00291 Pyridoxal-phosphate dependent enzyme RJ36_RS21175 PF00585 C-terminal regulatory domain of Threonine dehydratase RJ36_RS21180 PF00920 Dehydratase family RJ36_RS21185 PF01063 Amino-transferase class IV RJ36_RS21195 PF00205 Thiamine pyrophosphate enzyme, central domain RJ36_RS21195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RJ36_RS21195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RJ36_RS21200 PF01078 Magnesium chelatase, subunit ChlI RJ36_RS21200 PF13335 Magnesium chelatase, subunit ChlI C-terminal RJ36_RS21205 PF04219 Protein of unknown function, DUF RJ36_RS21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS21210 PF03466 LysR substrate binding domain RJ36_RS21250 PF01177 Asp/Glu/Hydantoin racemase RJ36_RS21255 PF00593 TonB dependent receptor RJ36_RS21255 PF07715 TonB-dependent Receptor Plug Domain RJ36_RS21265 PF05958 tRNA (Uracil-5-)-methyltransferase RJ36_RS21270 PF07226 Protein of unknown function (DUF1422) RJ36_RS21275 PF00440 Bacterial regulatory proteins, tetR family RJ36_RS21280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RJ36_RS21280 PF07992 Pyridine nucleotide-disulphide oxidoreductase RJ36_RS21285 PF03466 LysR substrate binding domain RJ36_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS21290 PF14698 Argininosuccinate lyase C-terminal RJ36_RS21290 PF00206 Lyase RJ36_RS21295 PF00696 Amino acid kinase family RJ36_RS21300 PF01118 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS21300 PF02774 Semialdehyde dehydrogenase, dimerisation domain RJ36_RS21305 PF07687 Peptidase dimerisation domain RJ36_RS21305 PF01546 Peptidase family M20/M25/M40 RJ36_RS21310 PF00311 Phosphoenolpyruvate carboxylase RJ36_RS21315 PF00884 Sulfatase RJ36_RS21320 PF12833 Helix-turn-helix domain RJ36_RS21325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS21330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RJ36_RS21340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RJ36_RS21340 PF05524 PEP-utilising enzyme, N-terminal RJ36_RS21340 PF02896 PEP-utilising enzyme, TIM barrel domain RJ36_RS21340 PF00381 PTS HPr component phosphorylation site RJ36_RS21340 PF00391 PEP-utilising enzyme, mobile domain RJ36_RS21345 PF00923 Transaldolase/Fructose-6-phosphate aldolase RJ36_RS21350 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS21355 PF00141 Peroxidase RJ36_RS21360 PF02219 Methylenetetrahydrofolate reductase RJ36_RS21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RJ36_RS21365 PF03466 LysR substrate binding domain RJ36_RS21375 PF00742 Homoserine dehydrogenase RJ36_RS21375 PF00696 Amino acid kinase family RJ36_RS21375 PF03447 Homoserine dehydrogenase, NAD binding domain RJ36_RS21380 PF01053 Cys/Met metabolism PLP-dependent enzyme RJ36_RS21385 PF01340 Met Apo-repressor, MetJ RJ36_RS21390 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RJ36_RS21395 PF01197 Ribosomal protein L31 RJ36_RS21400 PF00271 Helicase conserved C-terminal domain RJ36_RS21400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RJ36_RS21400 PF17764 3′ DNA-binding domain (3′BD) RJ36_RS21400 PF00270 DEAD/DEAH box helicase RJ36_RS21400 PF18074 Primosomal protein N C-terminal domain RJ36_RS21405 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS21410 PF05036 Sporulation related domain RJ36_RS21415 PF00227 Proteasome subunit RJ36_RS21420 PF00004 ATPase family associated with various cellular activities (AAA) RJ36_RS21420 PF07724 AAA domain (Cdc48 subfamily) RJ36_RS21420 PF10431 C-terminal, D2-small domain, of ClpB protein RJ36_RS21425 PF01040 UbiA prenyltransferase family RJ36_RS21430 PF03737 Aldolase/RraA RJ36_RS21445 PF00365 Phosphofructokinase RJ36_RS21450 PF16916 Dimerisation domain of Zinc Transporter RJ36_RS21450 PF01545 Cation efflux family RJ36_RS21455 PF07813 LTXXQ motif family protein RJ36_RS21460 PF00072 Response regulator receiver domain RJ36_RS21460 PF00486 Transcriptional regulatory protein, C terminal RJ36_RS21465 PF00672 HAMP domain RJ36_RS21465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS21465 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS21465 PF16527 Two-component sensor protein CpxA, periplasmic domain RJ36_RS21470 PF03473 MOSC domain RJ36_RS21470 PF03475 3-alpha domain RJ36_RS21475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RJ36_RS21475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RJ36_RS21480 PF06379 L-rhamnose-proton symport protein (RhaT) RJ36_RS21485 PF12833 Helix-turn-helix domain RJ36_RS21485 PF02311 AraC-like ligand binding domain RJ36_RS21490 PF02311 AraC-like ligand binding domain RJ36_RS21490 PF12833 Helix-turn-helix domain RJ36_RS21495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RJ36_RS21495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RJ36_RS21500 PF06134 L-rhamnose isomerase (RhaA) RJ36_RS21505 PF00596 Class II Aldolase and Adducin N-terminal domain RJ36_RS21510 PF00465 Iron-containing alcohol dehydrogenase RJ36_RS21515 PF05336 L-rhamnose mutarotase RJ36_RS21545 PF00158 Sigma-54 interaction domain RJ36_RS21545 PF00874 PRD domain RJ36_RS21545 PF03610 PTS system fructose IIA component RJ36_RS21555 PF07470 Glycosyl Hydrolase Family 88 RJ36_RS21560 PF03830 PTS system sorbose subfamily IIB component RJ36_RS21565 PF03609 PTS system sorbose-specific iic component RJ36_RS21570 PF03613 PTS system mannose/fructose/sorbose family IID component RJ36_RS21590 PF12889 Protein of unknown function (DUF3829) RJ36_RS21595 PF02634 FdhD/NarQ family RJ36_RS21600 PF01568 Molydopterin dinucleotide binding domain RJ36_RS21600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS21600 PF00384 Molybdopterin oxidoreductase RJ36_RS21605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS21605 PF00384 Molybdopterin oxidoreductase RJ36_RS21605 PF01568 Molydopterin dinucleotide binding domain RJ36_RS21610 PF09163 Formate dehydrogenase N, transmembrane RJ36_RS21610 PF13247 4Fe-4S dicluster domain RJ36_RS21615 PF01292 Prokaryotic cytochrome b561 RJ36_RS21620 PF04216 Protein involved in formate dehydrogenase formation RJ36_RS21645 PF07859 alpha/beta hydrolase fold RJ36_RS21650 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system RJ36_RS21660 PF09500 Putative thioesterase (yiiD_Cterm) RJ36_RS21660 PF00583 Acetyltransferase (GNAT) family RJ36_RS21665 PF02580 D-Tyr-tRNA(Tyr) deacylase RJ36_RS21670 PF03631 Virulence factor BrkB RJ36_RS21675 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS21680 PF07690 Major Facilitator Superfamily RJ36_RS21685 PF01261 Xylose isomerase-like TIM barrel RJ36_RS21690 PF07702 UTRA domain RJ36_RS21690 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS21695 PF03144 Elongation factor Tu domain 2 RJ36_RS21695 PF00679 Elongation factor G C-terminus RJ36_RS21695 PF00009 Elongation factor Tu GTP binding domain RJ36_RS21700 PF03951 Glutamine synthetase, beta-Grasp domain RJ36_RS21700 PF00120 Glutamine synthetase, catalytic domain RJ36_RS21705 PF00512 His Kinase A (phospho-acceptor) domain RJ36_RS21705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RJ36_RS21705 PF00989 PAS fold RJ36_RS21710 PF00072 Response regulator receiver domain RJ36_RS21710 PF02954 Bacterial regulatory protein, Fis family RJ36_RS21710 PF00158 Sigma-54 interaction domain RJ36_RS21715 PF04055 Radical SAM superfamily RJ36_RS21715 PF06969 HemN C-terminal domain RJ36_RS21720 PF04220 Der GTPase activator (YihI) RJ36_RS21725 PF01926 50S ribosome-binding GTPase RJ36_RS21730 PF01367 5'-3' exonuclease, C-terminal SAM fold RJ36_RS21730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RJ36_RS21730 PF00476 DNA polymerase family A RJ36_RS21730 PF01612 3'-5' exonuclease RJ36_RS21735 PF01553 Acyltransferase RJ36_RS21740 PF06097 Bacterial protein of unknown function (DUF945) RJ36_RS21745 PF01323 DSBA-like thioredoxin domain RJ36_RS21750 PF01636 Phosphotransferase enzyme family RJ36_RS21755 PF06288 Protein of unknown function (DUF1040) RJ36_RS21760 PF12804 MobA-like NTP transferase domain RJ36_RS21765 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RJ36_RS21790 PF00392 Bacterial regulatory proteins, gntR family RJ36_RS21790 PF07729 FCD domain RJ36_RS21795 PF07690 Major Facilitator Superfamily RJ36_RS21800 PF00356 Bacterial regulatory proteins, lacI family RJ36_RS21805 PF00294 pfkB family carbohydrate kinase RJ36_RS21810 PF13407 Periplasmic binding protein domain RJ36_RS21815 PF02653 Branched-chain amino acid transport system / permease component RJ36_RS21820 PF00005 ABC transporter RJ36_RS21825 PF05025 RbsD / FucU transport protein family RJ36_RS21830 PF02705 K+ potassium transporter RJ36_RS21835 PF17868 AAA lid domain RJ36_RS21835 PF07728 AAA domain (dynein-related subfamily) RJ36_RS21835 PF12592 Protein of unknown function (DUF3763) RJ36_RS21840 PF05762 VWA domain containing CoxE-like protein RJ36_RS21845 PF03590 Aspartate-ammonia ligase RJ36_RS21850 PF01037 Lrp/AsnC ligand binding domain RJ36_RS21855 PF00258 Flavodoxin RJ36_RS21860 PF01134 Glucose inhibited division protein A RJ36_RS21860 PF13932 GidA associated domain RJ36_RS21865 PF02527 rRNA small subunit methyltransferase G RJ36_RS21870 PF03899 ATP synthase I chain RJ36_RS21875 PF00119 ATP synthase A chain RJ36_RS21880 PF00137 ATP synthase subunit C RJ36_RS21885 PF00430 ATP synthase B/B' CF(0) RJ36_RS21890 PF00213 ATP synthase delta (OSCP) subunit RJ36_RS21895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJ36_RS21895 PF00306 ATP synthase alpha/beta chain, C terminal domain RJ36_RS21895 PF02874 ATP synthase alpha/beta family, beta-barrel domain RJ36_RS21900 PF00231 ATP synthase RJ36_RS21905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RJ36_RS21905 PF02874 ATP synthase alpha/beta family, beta-barrel domain RJ36_RS21910 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RJ36_RS21910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RJ36_RS21920 PF13229 Right handed beta helix region RJ36_RS21925 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS21925 PF12804 MobA-like NTP transferase domain RJ36_RS21925 PF14602 Hexapeptide repeat of succinyl-transferase RJ36_RS21930 PF01380 SIS domain RJ36_RS21935 PF12849 PBP superfamily domain RJ36_RS21940 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS21945 PF00528 Binding-protein-dependent transport system inner membrane component RJ36_RS21950 PF00005 ABC transporter RJ36_RS21955 PF01895 PhoU domain RJ36_RS21960 PF13419 Haloacid dehalogenase-like hydrolase RJ36_RS21965 PF00860 Permease family RJ36_RS21970 PF03358 NADPH-dependent FMN reductase RJ36_RS21985 PF12631 MnmE helical domain RJ36_RS21985 PF01926 50S ribosome-binding GTPase RJ36_RS21985 PF10396 GTP-binding protein TrmE N-terminus RJ36_RS21990 PF02096 60Kd inner membrane protein RJ36_RS21990 PF14849 YidC periplasmic domain RJ36_RS21995 PF00825 Ribonuclease P RJ36_RS22030 PF12849 PBP superfamily domain RJ36_RS22035 PF01478 Type IV leader peptidase family RJ36_RS22035 PF06750 Bacterial Peptidase A24 N-terminal domain RJ36_RS22040 PF06750 Bacterial Peptidase A24 N-terminal domain RJ36_RS22040 PF01478 Type IV leader peptidase family RJ36_RS22045 PF01551 Peptidase family M23 RJ36_RS22075 PF15596 Immunity protein 57 RJ36_RS22085 PF01848 Hok/gef family RJ36_RS22090 PF12833 Helix-turn-helix domain RJ36_RS22095 PF03212 Pertactin RJ36_RS22095 PF03797 Autotransporter beta-domain RJ36_RS22095 PF16168 Adhesin of bacterial autotransporter system, probable stalk RJ36_RS22095 PF13018 Extended Signal Peptide of Type V secretion system RJ36_RS22110 PF01848 Hok/gef family RJ36_RS22140 PF00132 Bacterial transferase hexapeptide (six repeats) RJ36_RS22140 PF12464 Maltose acetyltransferase