locus-tag	class	description
RJ36_RS00010	COG0592	DNA-directed DNA polymerase activity
RJ36_RS00025	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RJ36_RS00025	COG0446	pyridine nucleotide-disulphide oxidoreductase
RJ36_RS00030	COG1263	PTS System
RJ36_RS00030	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS00035	COG3753	Protein conserved in bacteria
RJ36_RS00040	COG0561	phosphatase activity
RJ36_RS00050	COG0823	Involved in the tonB-independent uptake of proteins
RJ36_RS00055	COG5645	(Lipo)protein
RJ36_RS00075	COG2188	Transcriptional regulator
RJ36_RS00090	COG2207	Transcriptional regulator
RJ36_RS00095	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RJ36_RS00100	COG3119	arylsulfatase activity
RJ36_RS00105	COG2149	membrane
RJ36_RS00115	COG0641	radical SAM
RJ36_RS00125	COG2814	Major facilitator Superfamily
RJ36_RS00130	COG0028	Belongs to the TPP enzyme family
RJ36_RS00135	COG0440	acetolactate synthase activity
RJ36_RS00140	COG0800	Aldolase
RJ36_RS00145	COG3734	2-keto-3-deoxy-galactonokinase
RJ36_RS00150	COG2271	Major facilitator Superfamily
RJ36_RS00155	COG2721	sulfolactate sulfo-lyase activity
RJ36_RS00160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RJ36_RS00165	COG1414	Transcriptional regulator
RJ36_RS00185	COG0697	spore germination
RJ36_RS00190	COG1263	PTS System
RJ36_RS00190	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS00200	COG2814	Major facilitator Superfamily
RJ36_RS00210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RJ36_RS00215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS00230	COG1309	transcriptional regulator
RJ36_RS00245	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS00250	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RJ36_RS00270	COG2211	Major facilitator Superfamily
RJ36_RS00275	COG1501	Belongs to the glycosyl hydrolase 31 family
RJ36_RS00280	COG2982	Protein involved in outer membrane biogenesis
RJ36_RS00285	COG2233	PERMEase
RJ36_RS00290	COG0786	glutamate:sodium symporter activity
RJ36_RS00305	COG3074	FtsZ-dependent cytokinesis
RJ36_RS00310	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
RJ36_RS00335	COG3152	Membrane
RJ36_RS00345	COG1494	fructose-1,6-bisphosphatase
RJ36_RS00350	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RJ36_RS00355	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RJ36_RS00360	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RJ36_RS00380	COG2860	membrane
RJ36_RS00385	COG1561	YicC-like family, N-terminal region
RJ36_RS00415	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RJ36_RS00425	COG0227	Belongs to the bacterial ribosomal protein bL28 family
RJ36_RS00430	COG0267	Belongs to the bacterial ribosomal protein bL33 family
RJ36_RS00445	COG1519	Transferase
RJ36_RS00450	COG0859	PFAM glycosyl transferase family 9
RJ36_RS00455	COG0438	transferase activity, transferring glycosyl groups
RJ36_RS00460	COG0515	serine threonine protein kinase
RJ36_RS00470	COG1442	glycosyl transferase family 8
RJ36_RS00475	COG3642	lipopolysaccharide core region biosynthetic process
RJ36_RS00500	COG0859	PFAM glycosyl transferase family 9
RJ36_RS00510	COG0156	8-amino-7-oxononanoate synthase activity
RJ36_RS00515	COG1063	alcohol dehydrogenase
RJ36_RS00520	COG1216	Glycosyl transferase, family 2
RJ36_RS00525	COG2861	carbohydrate metabolic process
RJ36_RS00530	COG4942	peptidase
RJ36_RS00535	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
RJ36_RS00540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RJ36_RS00545	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RJ36_RS00560	COG1045	serine acetyltransferase
RJ36_RS00565	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RJ36_RS00575	COG2186	Transcriptional regulator
RJ36_RS00595	COG3722	fumarate hydratase activity
RJ36_RS00605	COG2213	PTS system mannitol-specific
RJ36_RS00605	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS00615	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS00620	COG0625	glutathione transferase activity
RJ36_RS00630	COG3276	selenocysteine insertion sequence binding
RJ36_RS00635	COG1454	alcohol dehydrogenase
RJ36_RS00640	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS00650	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS00655	COG0583	DNA-binding transcription factor activity
RJ36_RS00660	COG3713	MltA-interacting MipA family protein
RJ36_RS00680	COG2211	Major facilitator Superfamily
RJ36_RS00690	COG0235	Class ii aldolase
RJ36_RS00695	COG3623	hexulose-6-phosphate isomerase
RJ36_RS00700	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
RJ36_RS00705	COG1070	Carbohydrate kinase
RJ36_RS00720	COG2731	YhcH YjgK YiaL family protein
RJ36_RS00730	COG1414	Transcriptional regulator
RJ36_RS00735	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RJ36_RS00740	COG3977	Valine--pyruvate aminotransferase
RJ36_RS00745	COG0366	Alpha amylase catalytic
RJ36_RS00750	COG2992	FlgJ-related protein
RJ36_RS00765	COG2207	Transcriptional regulator
RJ36_RS00765	COG1609	Transcriptional regulator
RJ36_RS00770	COG4214	carbohydrate transport
RJ36_RS00780	COG4213	ABC transporter substrate-binding protein
RJ36_RS00785	COG2115	Belongs to the xylose isomerase family
RJ36_RS00790	COG1070	Carbohydrate kinase
RJ36_RS00795	COG4682	membrane
RJ36_RS00800	COG3274	enterobacterial common antigen metabolic process
RJ36_RS00820	COG1278	Cold shock
RJ36_RS00825	COG2944	sequence-specific DNA binding
RJ36_RS00830	COG2814	Major facilitator Superfamily
RJ36_RS00855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RJ36_RS00865	COG1609	Transcriptional regulator
RJ36_RS00870	COG2885	chlorophyll binding
RJ36_RS00875	COG0243	molybdopterin cofactor binding
RJ36_RS00880	COG0456	acetyltransferase
RJ36_RS00885	COG2818	Glycosylase
RJ36_RS00890	COG5571	outer membrane autotransporter
RJ36_RS00895	COG2223	nitrite transmembrane transporter activity
RJ36_RS00900	COG2194	sulfuric ester hydrolase activity
RJ36_RS00910	COG0747	negative chemotaxis
RJ36_RS00915	COG0601	transmembrane transport
RJ36_RS00920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RJ36_RS00925	COG0444	Belongs to the ABC transporter superfamily
RJ36_RS00930	COG4608	Belongs to the ABC transporter superfamily
RJ36_RS00940	COG2194	sulfuric ester hydrolase activity
RJ36_RS00965	COG1215	transferase activity, transferring glycosyl groups
RJ36_RS00970	COG1215	transferase activity, transferring glycosyl groups
RJ36_RS00980	COG3118	belongs to the thioredoxin family
RJ36_RS00980	COG0457	Tetratricopeptide repeat
RJ36_RS00985	COG2200	EAL domain
RJ36_RS00985	COG2199	diguanylate cyclase activity
RJ36_RS00995	COG0612	Peptidase, M16
RJ36_RS01000	COG2801	Transposase and inactivated derivatives
RJ36_RS01000	COG3415	Transposase
RJ36_RS01010	COG2200	EAL domain
RJ36_RS01015	COG2982	Protein involved in outer membrane biogenesis
RJ36_RS01020	COG0477	Major facilitator Superfamily
RJ36_RS01025	COG1295	ribonuclease BN
RJ36_RS01030	COG0583	DNA-binding transcription factor activity
RJ36_RS01035	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS01040	COG2197	response regulator
RJ36_RS01060	COG3204	pilus organization
RJ36_RS01065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RJ36_RS01070	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
RJ36_RS01080	COG0339	signal peptide processing
RJ36_RS01095	COG1959	2 iron, 2 sulfur cluster binding
RJ36_RS01100	COG0589	response to stress
RJ36_RS01110	COG0306	phosphate transporter
RJ36_RS01115	COG2081	HI0933 family
RJ36_RS01120	COG2239	Acts as a magnesium transporter
RJ36_RS01125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS01130	COG0842	Transport permease protein
RJ36_RS01130	COG1129	ABC transporter
RJ36_RS01135	COG0842	Transport permease protein
RJ36_RS01140	COG0583	DNA-binding transcription factor activity
RJ36_RS01145	COG3479	Phenolic acid decarboxylase
RJ36_RS01150	COG0628	permease
RJ36_RS01155	COG0477	Major facilitator Superfamily
RJ36_RS01165	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
RJ36_RS01175	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
RJ36_RS01195	COG3714	YhhN family
RJ36_RS01205	COG3776	membrane
RJ36_RS01210	COG0742	ribosomal rna small subunit methyltransferase
RJ36_RS01215	COG0552	protein localization to endoplasmic reticulum
RJ36_RS01220	COG2884	Cell division ATP-binding protein ftsE
RJ36_RS01225	COG2177	Part of the ABC transporter FtsEX involved in
RJ36_RS01235	COG0683	leucine binding
RJ36_RS01260	COG0683	leucine binding
RJ36_RS01275	COG0411	ABC transporter
RJ36_RS01280	COG0410	ABC transporter
RJ36_RS01305	COG0584	glycerophosphoryl diester phosphodiesterase
RJ36_RS01315	COG0405	Gamma-glutamyltransferase
RJ36_RS01320	COG1247	-acetyltransferase
RJ36_RS01325	COG0673	inositol 2-dehydrogenase activity
RJ36_RS01330	COG1741	Belongs to the pirin family
RJ36_RS01335	COG1609	Transcriptional regulator
RJ36_RS01340	COG3265	gluconokinase activity
RJ36_RS01345	COG2610	gluconate transmembrane transporter activity
RJ36_RS01350	COG2095	MarC family integral membrane protein
RJ36_RS01380	COG0058	SHG alpha-glucan phosphorylase activity
RJ36_RS01395	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RJ36_RS01410	COG1349	DNA-binding transcription factor activity
RJ36_RS01415	COG2211	Major facilitator Superfamily
RJ36_RS01430	COG0058	SHG alpha-glucan phosphorylase activity
RJ36_RS01435	COG1640	4-alpha-glucanotransferase
RJ36_RS01440	COG2610	gluconate transmembrane transporter activity
RJ36_RS01450	COG1040	competence protein
RJ36_RS01475	COG1918	ferrous iron import across plasma membrane
RJ36_RS01480	COG2183	response to ionizing radiation
RJ36_RS01485	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RJ36_RS01515	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
RJ36_RS01525	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
RJ36_RS01530	COG1011	Hydrolase
RJ36_RS01540	COG0494	nUDIX hydrolase
RJ36_RS01545	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RJ36_RS01550	COG4972	Pilus assembly protein
RJ36_RS01570	COG4796	Type ii and iii secretion system protein
RJ36_RS01585	COG3266	domain, Protein
RJ36_RS01590	COG0338	D12 class N6 adenine-specific DNA methyltransferase
RJ36_RS01595	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RJ36_RS01620	COG2146	nitrite reductase [NAD(P)H] activity
RJ36_RS01625	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RJ36_RS01630	COG0402	S-adenosylhomocysteine deaminase activity
RJ36_RS01635	COG0738	Major facilitator superfamily
RJ36_RS01650	COG0512	Glutamine amidotransferase of anthranilate synthase
RJ36_RS01660	COG1289	transmembrane transporter activity
RJ36_RS01670	COG1765	OsmC-like protein
RJ36_RS01675	COG3954	Phosphoribulokinase
RJ36_RS01685	COG0429	hydrolase of the alpha beta-hydrolase fold
RJ36_RS01715	COG0679	Auxin Efflux Carrier
RJ36_RS01725	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RJ36_RS01735	COG0488	(ABC) transporter
RJ36_RS01745	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RJ36_RS01745	COG0475	glutathione-regulated potassium exporter activity
RJ36_RS01750	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
RJ36_RS01755	COG1047	Peptidyl-prolyl cis-trans
RJ36_RS01765	COG0545	Peptidyl-prolyl cis-trans isomerase
RJ36_RS01770	COG2964	Protein conserved in bacteria
RJ36_RS01795	COG0049	tRNA binding
RJ36_RS01825	COG0051	transcription antitermination factor activity, RNA binding
RJ36_RS01865	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
RJ36_RS01930	COG0201	protein transport
RJ36_RS01950	COG0202	RNA polymerase activity
RJ36_RS01965	COG0789	Transcriptional regulator
RJ36_RS01970	COG3036	rescue of stalled ribosome
RJ36_RS02000	COG0758	DNA mediated transformation
RJ36_RS02005	COG2922	Belongs to the Smg family
RJ36_RS02010	COG0551	DNA topoisomerase type I activity
RJ36_RS02030	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RJ36_RS02065	COG1126	abc transporter atp-binding protein
RJ36_RS02070	COG0765	amino acid transport
RJ36_RS02075	COG4597	amino acid ABC transporter
RJ36_RS02080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS02090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RJ36_RS02095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS02100	COG1309	transcriptional regulator
RJ36_RS02125	COG4145	pantothenate transmembrane transporter activity
RJ36_RS02130	COG3924	membrane
RJ36_RS02135	COG0439	Biotin carboxylase
RJ36_RS02140	COG0511	ligase activity, forming carbon-carbon bonds
RJ36_RS02145	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RJ36_RS02150	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
RJ36_RS02160	COG0604	alcohol dehydrogenase
RJ36_RS02165	COG2199	diguanylate cyclase activity
RJ36_RS02165	COG2200	EAL domain
RJ36_RS02170	COG1077	Cell shape determining protein MreB Mrl
RJ36_RS02175	COG1792	Involved in formation and maintenance of cell shape
RJ36_RS02180	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
RJ36_RS02195	COG3164	Protein of unknown function
RJ36_RS02200	COG0312	modulator of DNA gyrase
RJ36_RS02205	COG0583	DNA-binding transcription factor activity
RJ36_RS02215	COG1289	transmembrane transporter activity
RJ36_RS02220	COG2732	(Barnase) inhibitor
RJ36_RS02250	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RJ36_RS02255	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RJ36_RS02260	COG3105	Protein conserved in bacteria
RJ36_RS02265	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
RJ36_RS02280	COG0625	glutathione transferase activity
RJ36_RS02285	COG2969	positive regulation of protein catabolic process
RJ36_RS02315	COG2731	YhcH YjgK YiaL family protein
RJ36_RS02320	COG0493	'glutamate synthase
RJ36_RS02325	COG0069	glutamate synthase activity
RJ36_RS02325	COG0070	glutamate synthase
RJ36_RS02325	COG0067	glutamate synthase
RJ36_RS02330	COG1242	4 iron, 4 sulfur cluster binding
RJ36_RS02335	COG5002	protein histidine kinase activity
RJ36_RS02335	COG2198	Histidine kinase
RJ36_RS02335	COG0784	Response regulator, receiver
RJ36_RS02340	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
RJ36_RS02350	COG0515	serine threonine protein kinase
RJ36_RS02355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS02365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS02375	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
RJ36_RS02380	COG1137	ATPase activity
RJ36_RS02385	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
RJ36_RS02390	COG3117	lipopolysaccharide transmembrane transporter activity
RJ36_RS02395	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
RJ36_RS02405	COG0530	calcium, potassium:sodium antiporter activity
RJ36_RS02410	COG1127	ABC transporter
RJ36_RS02415	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
RJ36_RS02420	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
RJ36_RS02425	COG2854	intermembrane phospholipid transfer
RJ36_RS02430	COG3113	response to antibiotic
RJ36_RS02435	COG5007	Belongs to the BolA IbaG family
RJ36_RS02445	COG3423	Transcriptional regulator
RJ36_RS02450	COG0142	geranyltranstransferase activity
RJ36_RS02455	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RJ36_RS02460	COG0211	Belongs to the bacterial ribosomal protein bL27 family
RJ36_RS02465	COG0697	spore germination
RJ36_RS02480	COG2027	D-alanyl-D-alanine carboxypeptidase
RJ36_RS02490	COG1534	Rna-binding protein
RJ36_RS02500	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RJ36_RS02505	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RJ36_RS02515	COG2165	general secretion pathway protein
RJ36_RS02550	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RJ36_RS02555	COG1459	type II secretion system
RJ36_RS02575	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RJ36_RS02610	COG0195	Participates in both transcription termination and antitermination
RJ36_RS02615	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
RJ36_RS02645	COG0513	Belongs to the DEAD box helicase family
RJ36_RS02650	COG0814	amino acid
RJ36_RS02655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RJ36_RS02660	COG0826	peptidase U32
RJ36_RS02665	COG0826	peptidase U32
RJ36_RS02670	COG3154	lipid carrier protein
RJ36_RS02675	COG3153	acetyltransferase
RJ36_RS02690	COG0693	protein deglycase activity
RJ36_RS02695	COG0702	epimerase
RJ36_RS02700	COG2823	Periplasmic or secreted lipoprotein
RJ36_RS02715	COG3107	peptidoglycan biosynthetic process
RJ36_RS02720	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RJ36_RS02725	COG3539	Fimbrial protein
RJ36_RS02730	COG3188	usher protein
RJ36_RS02735	COG3121	Chaperone
RJ36_RS02740	COG3539	Fimbrial protein
RJ36_RS02745	COG2721	sulfolactate sulfo-lyase activity
RJ36_RS02750	COG2271	Major facilitator Superfamily
RJ36_RS02760	COG2084	Dehydrogenase
RJ36_RS02765	COG1929	Belongs to the glycerate kinase type-1 family
RJ36_RS02770	COG0583	DNA-binding transcription factor activity
RJ36_RS02790	COG1882	Formate acetyltransferase
RJ36_RS02795	COG0251	oxidation-reduction process
RJ36_RS02800	COG1760	l-serine dehydratase
RJ36_RS02805	COG1741	Belongs to the pirin family
RJ36_RS02810	COG0583	DNA-binding transcription factor activity
RJ36_RS02815	COG3152	Membrane
RJ36_RS02820	COG0435	Glutathione S-transferase
RJ36_RS02825	COG2259	Doxx family
RJ36_RS02830	COG5464	transposase or invertase
RJ36_RS02840	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
RJ36_RS02845	COG4575	ribosome binding
RJ36_RS02850	COG1422	Protein of unknown function (DUF1090)
RJ36_RS02860	COG0586	Pfam SNARE associated Golgi protein
RJ36_RS02865	COG2186	Transcriptional regulator
RJ36_RS02870	COG2271	Major facilitator Superfamily
RJ36_RS02880	COG2721	sulfolactate sulfo-lyase activity
RJ36_RS02900	COG0673	inositol 2-dehydrogenase activity
RJ36_RS02905	COG2949	membrane
RJ36_RS02910	COG1451	nucleotide metabolic process
RJ36_RS02915	COG2813	Specifically methylates the guanine in position
RJ36_RS02920	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS02920	COG0446	pyridine nucleotide-disulphide oxidoreductase
RJ36_RS02930	COG0840	transmembrane signaling receptor activity
RJ36_RS02935	COG1695	Transcriptional regulator
RJ36_RS02940	COG2375	cellular response to nickel ion
RJ36_RS02950	COG2011	ABC-type metal ion transport system permease component
RJ36_RS02955	COG1464	Belongs to the NlpA lipoprotein family
RJ36_RS02965	COG4232	protein-disulfide reductase activity
RJ36_RS02970	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RJ36_RS02970	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RJ36_RS02975	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RJ36_RS03020	COG0358	DNA primase activity
RJ36_RS03025	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RJ36_RS03040	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
RJ36_RS03055	COG4991	sh3 domain protein
RJ36_RS03060	COG3025	triphosphatase activity
RJ36_RS03090	COG3539	Fimbrial protein
RJ36_RS03095	COG3121	Chaperone
RJ36_RS03100	COG3188	usher protein
RJ36_RS03115	COG3384	dioxygenase
RJ36_RS03120	COG0754	glutathionylspermidine amidase activity
RJ36_RS03130	COG1538	Outer membrane efflux protein
RJ36_RS03135	COG0494	nUDIX hydrolase
RJ36_RS03140	COG3151	Protein conserved in bacteria
RJ36_RS03145	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RJ36_RS03150	COG3150	esterase
RJ36_RS03155	COG0187	DNA topoisomerase II activity
RJ36_RS03160	COG2207	Transcriptional regulator
RJ36_RS03160	COG1917	Cupin 2, conserved barrel domain protein
RJ36_RS03170	COG2211	Major facilitator Superfamily
RJ36_RS03175	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RJ36_RS03180	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
RJ36_RS03185	COG2249	NAD(P)H dehydrogenase (quinone) activity
RJ36_RS03195	COG0642	Histidine kinase
RJ36_RS03205	COG3111	PFAM Bacterial OB fold (BOF) protein
RJ36_RS03210	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
RJ36_RS03230	COG0501	Belongs to the peptidase M48B family
RJ36_RS03235	COG1704	LemA family
RJ36_RS03245	COG1032	radical SAM domain protein
RJ36_RS03260	COG0471	metal ion transport
RJ36_RS03270	COG1979	alcohol dehydrogenase
RJ36_RS03275	COG2207	Transcriptional regulator
RJ36_RS03300	COG0848	biopolymer transport protein
RJ36_RS03305	COG0840	transmembrane signaling receptor activity
RJ36_RS03310	COG2862	Uncharacterized protein family, UPF0114
RJ36_RS03315	COG0667	Aldo Keto reductase
RJ36_RS03330	COG0625	glutathione transferase activity
RJ36_RS03335	COG0754	glutathionylspermidine amidase activity
RJ36_RS03340	COG0747	negative chemotaxis
RJ36_RS03345	COG0601	transmembrane transport
RJ36_RS03350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RJ36_RS03395	COG3539	Fimbrial protein
RJ36_RS03400	COG3188	usher protein
RJ36_RS03405	COG3121	Chaperone
RJ36_RS03445	COG3647	Membrane
RJ36_RS03450	COG0583	DNA-binding transcription factor activity
RJ36_RS03455	COG0288	reversible hydration of carbon dioxide
RJ36_RS03465	COG2807	transmembrane transport
RJ36_RS03495	COG1811	Na channel or pump
RJ36_RS03500	COG1982	Orn Lys Arg decarboxylase major
RJ36_RS03515	COG3493	citrate carrier protein
RJ36_RS03520	COG0179	Fumarylacetoacetate (FAA) hydrolase
RJ36_RS03530	COG3052	prosthetic group binding
RJ36_RS03550	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
RJ36_RS03565	COG1194	a g-specific adenine glycosylase
RJ36_RS03575	COG3171	Protein conserved in bacteria
RJ36_RS03585	COG2852	Protein conserved in bacteria
RJ36_RS03595	COG0252	asparaginase activity
RJ36_RS03600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RJ36_RS03615	COG0762	integral membrane protein
RJ36_RS03620	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
RJ36_RS03625	COG2805	Type II/IV secretion system protein
RJ36_RS03635	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
RJ36_RS03650	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RJ36_RS03655	COG2356	endonuclease I
RJ36_RS03660	COG3091	SprT-like family
RJ36_RS03665	COG2814	Major facilitator Superfamily
RJ36_RS03690	COG2146	nitrite reductase [NAD(P)H] activity
RJ36_RS03705	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS03710	COG1414	Transcriptional regulator
RJ36_RS03725	COG2814	Major facilitator Superfamily
RJ36_RS03740	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS03745	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
RJ36_RS03755	COG0028	Belongs to the TPP enzyme family
RJ36_RS03765	COG0501	Belongs to the peptidase M48B family
RJ36_RS03770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RJ36_RS03790	COG0191	fructose-bisphosphate aldolase activity
RJ36_RS03795	COG0549	Belongs to the carbamate kinase family
RJ36_RS03800	COG2271	Major facilitator Superfamily
RJ36_RS03805	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RJ36_RS03810	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RJ36_RS03820	COG0583	DNA-binding transcription factor activity
RJ36_RS03825	COG0668	transmembrane transport
RJ36_RS03830	COG1279	arginine transmembrane transporter activity
RJ36_RS03835	COG2968	Membrane
RJ36_RS03840	COG0583	DNA-binding transcription factor activity
RJ36_RS03845	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
RJ36_RS03850	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RJ36_RS03855	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RJ36_RS03870	COG0006	proline dipeptidase activity
RJ36_RS03875	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RJ36_RS03880	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RJ36_RS03900	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS03905	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS03910	COG1737	Transcriptional regulator
RJ36_RS03920	COG1272	protein, Hemolysin III
RJ36_RS03930	COG0354	folic acid binding
RJ36_RS03935	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
RJ36_RS03960	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RJ36_RS03980	COG1811	Na channel or pump
RJ36_RS03990	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RJ36_RS03995	COG0583	DNA-binding transcription factor activity
RJ36_RS04000	COG4942	peptidase
RJ36_RS04010	COG4529	Protein conserved in bacteria
RJ36_RS04015	COG4773	Receptor
RJ36_RS04050	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS04060	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RJ36_RS04105	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RJ36_RS04125	COG0814	amino acid
RJ36_RS04140	COG0183	Belongs to the thiolase family
RJ36_RS04150	COG0823	Involved in the tonB-independent uptake of proteins
RJ36_RS04160	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS04165	COG2814	Major facilitator Superfamily
RJ36_RS04170	COG0823	Involved in the tonB-independent uptake of proteins
RJ36_RS04180	COG3842	ATPase activity
RJ36_RS04185	COG0395	ABC-type sugar transport system, permease component
RJ36_RS04190	COG1175	transmembrane transport
RJ36_RS04200	COG1794	racemase activity, acting on amino acids and derivatives
RJ36_RS04205	COG0583	DNA-binding transcription factor activity
RJ36_RS04215	COG1609	Transcriptional regulator
RJ36_RS04235	COG3157	Type VI secretion system effector, Hcp
RJ36_RS04250	COG1609	Transcriptional regulator
RJ36_RS04265	COG0667	Aldo Keto reductase
RJ36_RS04275	COG0861	Integral membrane protein TerC family
RJ36_RS04315	COG2165	general secretion pathway protein
RJ36_RS04320	COG4795	General secretion pathway protein
RJ36_RS04330	COG4967	type IV pilus modification protein PilV
RJ36_RS04335	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
RJ36_RS04345	COG1074	ATP-dependent DNA helicase activity
RJ36_RS04350	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RJ36_RS04355	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
RJ36_RS04355	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RJ36_RS04360	COG0860	N-Acetylmuramoyl-L-alanine amidase
RJ36_RS04375	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RJ36_RS04380	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
RJ36_RS04385	COG2166	iron-sulfur cluster assembly
RJ36_RS04390	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RJ36_RS04400	COG0583	DNA-binding transcription factor activity
RJ36_RS04405	COG2363	Small membrane protein
RJ36_RS04420	COG1760	l-serine dehydratase
RJ36_RS04425	COG0814	amino acid
RJ36_RS04430	COG1611	Belongs to the LOG family
RJ36_RS04445	COG3098	single-species biofilm formation
RJ36_RS04450	COG0564	pseudouridine synthase activity
RJ36_RS04455	COG0716	FMN binding
RJ36_RS04460	COG2271	Major facilitator Superfamily
RJ36_RS04465	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS04470	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS04475	COG1929	Belongs to the glycerate kinase type-1 family
RJ36_RS04480	COG2205	protein histidine kinase activity
RJ36_RS04480	COG3437	response regulator, receiver
RJ36_RS04480	COG3850	Histidine kinase
RJ36_RS04480	COG4999	Histidine kinase
RJ36_RS04490	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RJ36_RS04495	COG3956	TIGRFAM MazG family protein
RJ36_RS04510	COG0602	queuosine metabolic process
RJ36_RS04515	COG0720	synthase
RJ36_RS04540	COG2234	aminopeptidase activity
RJ36_RS04600	COG1388	LysM domain
RJ36_RS04600	COG4942	peptidase
RJ36_RS04605	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RJ36_RS04615	COG0163	prenyltransferase activity
RJ36_RS04620	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RJ36_RS04630	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RJ36_RS04650	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RJ36_RS04655	COG1882	Formate acetyltransferase
RJ36_RS04665	COG0309	Hydrogenase expression formation protein (HypE)
RJ36_RS04670	COG0409	Hydrogenase expression formation protein
RJ36_RS04675	COG0298	carbon dioxide binding
RJ36_RS04680	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RJ36_RS04685	COG0375	protein maturation
RJ36_RS04695	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RJ36_RS04700	COG0651	ATP synthesis coupled electron transport
RJ36_RS04705	COG0650	Formate hydrogenlyase subunit 4
RJ36_RS04710	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
RJ36_RS04710	COG3261	NADH dehydrogenase
RJ36_RS04715	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RJ36_RS04720	COG3260	NADH ubiquinone oxidoreductase 20
RJ36_RS04730	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
RJ36_RS04745	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS04750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS04750	COG1263	PTS System
RJ36_RS04755	COG1609	Transcriptional regulator
RJ36_RS04760	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RJ36_RS04765	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS04770	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
RJ36_RS04780	COG1773	rubredoxin
RJ36_RS04780	COG0426	domain, Protein
RJ36_RS04790	COG0517	IMP dehydrogenase activity
RJ36_RS04790	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RJ36_RS04795	COG2951	lytic endotransglycosylase activity
RJ36_RS04805	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RJ36_RS04810	COG0803	Belongs to the bacterial solute-binding protein 9 family
RJ36_RS04820	COG1546	Belongs to the CinA family
RJ36_RS04840	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
RJ36_RS04870	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RJ36_RS04875	COG1238	metal cluster binding
RJ36_RS04890	COG2814	Major facilitator Superfamily
RJ36_RS04895	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS04900	COG1846	Transcriptional regulator
RJ36_RS04905	COG2814	Major facilitator Superfamily
RJ36_RS04910	COG2113	Glycine betaine
RJ36_RS04915	COG4176	ABC-type proline glycine betaine transport system permease component
RJ36_RS04925	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RJ36_RS04930	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RJ36_RS04945	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RJ36_RS04955	COG4575	ribosome binding
RJ36_RS04980	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RJ36_RS04990	COG3121	Chaperone
RJ36_RS05015	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
RJ36_RS05020	COG3423	Transcriptional regulator
RJ36_RS05045	COG1444	tRNA N-acetyltransferase activity
RJ36_RS05070	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS05095	COG2867	negative regulation of translational initiation
RJ36_RS05105	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RJ36_RS05110	COG0497	DNA recombination
RJ36_RS05125	COG5001	Diguanylate cyclase
RJ36_RS05130	COG4536	flavin adenine dinucleotide binding
RJ36_RS05135	COG4137	Cytochrome C assembly protein
RJ36_RS05140	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RJ36_RS05175	COG2885	chlorophyll binding
RJ36_RS05180	COG2199	diguanylate cyclase activity
RJ36_RS05190	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RJ36_RS05195	COG1605	Chorismate mutase
RJ36_RS05195	COG0287	Prephenate dehydrogenase
RJ36_RS05205	COG1605	Chorismate mutase
RJ36_RS05205	COG0077	Prephenate dehydratase
RJ36_RS05210	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
RJ36_RS05215	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RJ36_RS05225	COG1496	oxidoreductase activity
RJ36_RS05230	COG0542	response to heat
RJ36_RS05255	COG0477	Major facilitator Superfamily
RJ36_RS05260	COG5544	Lipoprotein
RJ36_RS05265	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RJ36_RS05270	COG0045	succinate-CoA ligase (ADP-forming) activity
RJ36_RS05270	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RJ36_RS05270	COG1042	CoA-binding domain protein
RJ36_RS05275	COG3148	PFAM DTW domain containing protein
RJ36_RS05280	COG3118	belongs to the thioredoxin family
RJ36_RS05285	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RJ36_RS05300	COG0513	Belongs to the DEAD box helicase family
RJ36_RS05305	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
RJ36_RS05310	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
RJ36_RS05320	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
RJ36_RS05330	COG3086	response to oxidative stress
RJ36_RS05340	COG0681	Belongs to the peptidase S26 family
RJ36_RS05360	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RJ36_RS05365	COG0736	holo-[acyl-carrier-protein] synthase activity
RJ36_RS05370	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RJ36_RS05375	COG1737	Transcriptional regulator
RJ36_RS05380	COG0560	Phosphoserine phosphatase
RJ36_RS05395	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RJ36_RS05395	COG0047	phosphoribosylformylglycinamidine synthase activity
RJ36_RS05400	COG2205	protein histidine kinase activity
RJ36_RS05405	COG3170	Tfp pilus assembly protein FimV
RJ36_RS05410	COG2204	response regulator
RJ36_RS05415	COG0347	Belongs to the P(II) protein family
RJ36_RS05420	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RJ36_RS05420	COG1017	nitric oxide dioxygenase activity
RJ36_RS05430	COG2259	Doxx family
RJ36_RS05455	COG4638	Rieske (2fe-2S)
RJ36_RS05460	COG0583	DNA-binding transcription factor activity
RJ36_RS05465	COG2814	Major facilitator Superfamily
RJ36_RS05470	COG3711	transcriptional antiterminator
RJ36_RS05480	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
RJ36_RS05485	COG1073	alpha beta
RJ36_RS05500	COG1959	2 iron, 2 sulfur cluster binding
RJ36_RS05510	COG0822	iron-sulfur transferase activity
RJ36_RS05530	COG0633	Ferredoxin
RJ36_RS05535	COG2975	iron-sulfur cluster assembly
RJ36_RS05550	COG2897	thiosulfate sulfurtransferase activity
RJ36_RS05555	COG2373	Large extracellular alpha-helical protein
RJ36_RS05560	COG4953	penicillin-binding protein 1C
RJ36_RS05590	COG2976	Protein conserved in bacteria
RJ36_RS05605	COG1645	bacterial-type flagellum-dependent swarming motility
RJ36_RS05615	COG0517	IMP dehydrogenase activity
RJ36_RS05615	COG0516	GMP reductase activity
RJ36_RS05620	COG0519	Catalyzes the synthesis of GMP from XMP
RJ36_RS05620	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RJ36_RS05630	COG0514	ATP-dependent DNA helicase (RecQ)
RJ36_RS05635	COG2200	EAL domain
RJ36_RS05655	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
RJ36_RS05660	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
RJ36_RS05670	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS05680	COG2233	PERMEase
RJ36_RS05690	COG5464	transposase or invertase
RJ36_RS05695	COG1393	Belongs to the ArsC family
RJ36_RS05700	COG4783	chaperone-mediated protein folding
RJ36_RS05705	COG0628	permease
RJ36_RS05710	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RJ36_RS05715	COG2716	regulation of RNA biosynthetic process
RJ36_RS05720	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RJ36_RS05725	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
RJ36_RS05735	COG2321	neutral zinc metallopeptidase
RJ36_RS05740	COG1444	tRNA N-acetyltransferase activity
RJ36_RS05745	COG0400	carboxylic ester hydrolase activity
RJ36_RS05760	COG1393	Belongs to the ArsC family
RJ36_RS05765	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RJ36_RS05770	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RJ36_RS05770	COG0493	'glutamate synthase
RJ36_RS05780	COG5342	invasion associated locus B
RJ36_RS05785	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RJ36_RS05795	COG4810	utilization protein
RJ36_RS05810	COG4812	Cobalamin adenosyltransferase
RJ36_RS05815	COG0280	phosphate acetyltransferase
RJ36_RS05840	COG1454	alcohol dehydrogenase
RJ36_RS05850	COG4819	ethanolamine utilization protein
RJ36_RS05855	COG4303	Ethanolamine ammonia lyase large subunit
RJ36_RS05865	COG4816	utilization protein
RJ36_RS05875	COG2207	Transcriptional regulator
RJ36_RS05885	COG0860	N-Acetylmuramoyl-L-alanine amidase
RJ36_RS05905	COG2837	iron assimilation
RJ36_RS05915	COG4150	thiosulfate binding
RJ36_RS05920	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
RJ36_RS05925	COG4208	sulfate ABC transporter
RJ36_RS05930	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RJ36_RS05935	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RJ36_RS05940	COG4319	ketosteroid isomerase
RJ36_RS05950	COG2200	EAL domain
RJ36_RS05970	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RJ36_RS05990	COG3530	Putative quorum-sensing-regulated virulence factor
RJ36_RS05995	COG0385	Bile acid
RJ36_RS06000	COG0583	DNA-binding transcription factor activity
RJ36_RS06010	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
RJ36_RS06015	COG2211	Major facilitator Superfamily
RJ36_RS06020	COG0583	DNA-binding transcription factor activity
RJ36_RS06050	COG3415	Transposase
RJ36_RS06055	COG3415	Transposase
RJ36_RS06070	COG2199	diguanylate cyclase activity
RJ36_RS06070	COG2200	EAL domain
RJ36_RS06075	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
RJ36_RS06090	COG0667	Aldo Keto reductase
RJ36_RS06095	COG3961	Belongs to the TPP enzyme family
RJ36_RS06110	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS06115	COG3279	Response regulator of the LytR AlgR family
RJ36_RS06120	COG3275	phosphorelay sensor kinase activity
RJ36_RS06125	COG0436	Aminotransferase
RJ36_RS06130	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RJ36_RS06135	COG0700	Nucleoside recognition
RJ36_RS06140	COG3366	ferrous iron transmembrane transporter activity
RJ36_RS06145	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS06170	COG0251	oxidation-reduction process
RJ36_RS06200	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS06205	COG0596	Alpha beta hydrolase
RJ36_RS06230	COG2388	GCN5-related N-acetyl-transferase
RJ36_RS06235	COG3592	Divergent 4Fe-4S mono-cluster
RJ36_RS06270	COG2076	Multidrug Resistance protein
RJ36_RS06290	COG0154	amidase activity
RJ36_RS06310	COG4638	Rieske (2fe-2S)
RJ36_RS06320	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS06330	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RJ36_RS06350	COG4993	Dehydrogenase
RJ36_RS06380	COG2116	formate transmembrane transporter activity
RJ36_RS06390	COG2067	long-chain fatty acid transport protein
RJ36_RS06395	COG3691	Protein conserved in bacteria
RJ36_RS06410	COG2062	phosphohistidine phosphatase, SixA
RJ36_RS06435	COG0730	response to heat
RJ36_RS06440	COG3101	peptidyl-lysine hydroxylation
RJ36_RS06450	COG2801	Transposase and inactivated derivatives
RJ36_RS06450	COG3415	Transposase
RJ36_RS06460	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RJ36_RS06470	COG2814	Major facilitator Superfamily
RJ36_RS06475	COG2188	Transcriptional regulator
RJ36_RS06480	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS06495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RJ36_RS06505	COG0586	Pfam SNARE associated Golgi protein
RJ36_RS06515	COG0285	dihydrofolate synthase activity
RJ36_RS06520	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
RJ36_RS06525	COG1286	toxin biosynthetic process
RJ36_RS06530	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RJ36_RS06535	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
RJ36_RS06540	COG0437	4 iron, 4 sulfur cluster binding
RJ36_RS06545	COG5557	Pfam Polysulphide reductase, NrfD
RJ36_RS06550	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
RJ36_RS06555	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
RJ36_RS06560	COG1773	rubredoxin
RJ36_RS06570	COG0298	carbon dioxide binding
RJ36_RS06575	COG0163	prenyltransferase activity
RJ36_RS06595	COG4160	amino acid transport
RJ36_RS06600	COG4598	ABC transporter
RJ36_RS06610	COG1090	epimerase
RJ36_RS06615	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
RJ36_RS06620	COG0625	glutathione transferase activity
RJ36_RS06625	COG0625	glutathione transferase activity
RJ36_RS06630	COG0622	Phosphoesterase
RJ36_RS06635	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
RJ36_RS06660	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RJ36_RS06665	COG0490	domain, Protein
RJ36_RS06665	COG0471	metal ion transport
RJ36_RS06675	COG0436	Aminotransferase
RJ36_RS06680	COG0583	DNA-binding transcription factor activity
RJ36_RS06725	COG0839	Belongs to the complex I subunit 6 family
RJ36_RS06730	COG0713	ATP synthesis coupled electron transport
RJ36_RS06735	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RJ36_RS06740	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RJ36_RS06755	COG2153	protein acetylation
RJ36_RS06760	COG4575	ribosome binding
RJ36_RS06765	COG1169	isochorismate synthase
RJ36_RS06810	COG0247	lactate metabolic process
RJ36_RS06820	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RJ36_RS06825	COG0583	DNA-binding transcription factor activity
RJ36_RS06830	COG2814	Major facilitator Superfamily
RJ36_RS06835	COG3642	lipopolysaccharide core region biosynthetic process
RJ36_RS06840	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RJ36_RS06845	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RJ36_RS06855	COG3468	outer membrane autotransporter barrel domain protein
RJ36_RS06880	COG2198	Histidine kinase
RJ36_RS06880	COG0642	Histidine kinase
RJ36_RS06895	COG2169	Transcriptional regulator
RJ36_RS06895	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RJ36_RS06905	COG4615	Cyclic peptide transporter
RJ36_RS06910	COG2239	Acts as a magnesium transporter
RJ36_RS06915	COG0659	secondary active sulfate transmembrane transporter activity
RJ36_RS06935	COG0494	nUDIX hydrolase
RJ36_RS06965	COG3081	Nucleoid-associated protein
RJ36_RS06975	COG1061	Type III restriction enzyme res subunit
RJ36_RS06980	COG1187	pseudouridine synthase activity
RJ36_RS06985	COG2814	Major facilitator Superfamily
RJ36_RS06995	COG4172	Belongs to the ABC transporter superfamily
RJ36_RS07000	COG4239	(ABC) transporter, permease
RJ36_RS07005	COG4174	ABC transporter (Permease)
RJ36_RS07010	COG4166	transmembrane transport
RJ36_RS07015	COG2200	EAL domain
RJ36_RS07020	COG0791	NLP P60 protein
RJ36_RS07025	COG0671	phosphoesterase, PA-phosphatase related
RJ36_RS07030	COG0523	cobalamin synthesis protein
RJ36_RS07035	COG0246	Mannitol dehydrogenase
RJ36_RS07040	COG1312	Catalyzes the dehydration of D-mannonate
RJ36_RS07045	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RJ36_RS07050	COG2814	Major facilitator Superfamily
RJ36_RS07055	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS07055	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS07060	COG1105	Belongs to the carbohydrate kinase PfkB family
RJ36_RS07065	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
RJ36_RS07065	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS07065	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS07075	COG2855	membrane
RJ36_RS07080	COG0583	DNA-binding transcription factor activity
RJ36_RS07085	COG0833	amino acid
RJ36_RS07090	COG4771	TonB-dependent receptor
RJ36_RS07100	COG0477	Major facilitator Superfamily
RJ36_RS07110	COG2311	Membrane
RJ36_RS07125	COG1129	ABC transporter
RJ36_RS07140	COG0493	'glutamate synthase
RJ36_RS07145	COG2949	membrane
RJ36_RS07150	COG0295	cytidine deaminase activity
RJ36_RS07155	COG1346	cytolysis
RJ36_RS07170	COG2271	Major facilitator Superfamily
RJ36_RS07185	COG0625	glutathione transferase activity
RJ36_RS07190	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RJ36_RS07195	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RJ36_RS07200	COG2226	methyltransferase
RJ36_RS07205	COG1538	Outer membrane efflux protein
RJ36_RS07210	COG0586	Pfam SNARE associated Golgi protein
RJ36_RS07220	COG1686	Belongs to the peptidase S11 family
RJ36_RS07230	COG0277	FAD linked oxidase domain protein
RJ36_RS07235	COG1472	Belongs to the glycosyl hydrolase 3 family
RJ36_RS07250	COG2814	Major facilitator Superfamily
RJ36_RS07255	COG1732	Glycine betaine
RJ36_RS07260	COG3121	Chaperone
RJ36_RS07275	COG3121	Chaperone
RJ36_RS07280	COG3539	Fimbrial protein
RJ36_RS07290	COG1174	glycine betaine transport
RJ36_RS07295	COG1125	glycine betaine transport
RJ36_RS07300	COG1174	glycine betaine transport
RJ36_RS07305	COG0789	Transcriptional regulator
RJ36_RS07310	COG3275	phosphorelay sensor kinase activity
RJ36_RS07320	COG4807	Protein conserved in bacteria
RJ36_RS07330	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RJ36_RS07330	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RJ36_RS07335	COG0489	protein tyrosine kinase activity
RJ36_RS07340	COG5455	response to cobalt ion
RJ36_RS07345	COG0604	alcohol dehydrogenase
RJ36_RS07350	COG0583	DNA-binding transcription factor activity
RJ36_RS07355	COG2188	Transcriptional regulator
RJ36_RS07360	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS07365	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS07370	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS07375	COG0673	inositol 2-dehydrogenase activity
RJ36_RS07385	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
RJ36_RS07410	COG2252	PERMEase
RJ36_RS07420	COG0583	DNA-binding transcription factor activity
RJ36_RS07425	COG2188	Transcriptional regulator
RJ36_RS07430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RJ36_RS07435	COG1397	ADP-ribosylglycohydrolase
RJ36_RS07440	COG2211	Major facilitator Superfamily
RJ36_RS07445	COG1830	Aldolase
RJ36_RS07450	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS07455	COG0747	negative chemotaxis
RJ36_RS07460	COG0601	transmembrane transport
RJ36_RS07465	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RJ36_RS07470	COG0444	Belongs to the ABC transporter superfamily
RJ36_RS07475	COG4608	Belongs to the ABC transporter superfamily
RJ36_RS07485	COG0826	peptidase U32
RJ36_RS07490	COG0745	RESPONSE REGULATOR receiver
RJ36_RS07495	COG2205	protein histidine kinase activity
RJ36_RS07520	COG0443	Heat shock 70 kDa protein
RJ36_RS07525	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
RJ36_RS07530	COG3447	MASE1 domain protein
RJ36_RS07530	COG5002	protein histidine kinase activity
RJ36_RS07530	COG5001	Diguanylate cyclase
RJ36_RS07545	COG2982	Protein involved in outer membrane biogenesis
RJ36_RS07560	COG1253	flavin adenine dinucleotide binding
RJ36_RS07565	COG1596	polysaccharide export
RJ36_RS07575	COG0489	protein tyrosine kinase activity
RJ36_RS07575	COG3206	protein involved in exopolysaccharide biosynthesis
RJ36_RS07580	COG0463	Glycosyl transferase, family 2
RJ36_RS07585	COG1045	serine acetyltransferase
RJ36_RS07590	COG0438	transferase activity, transferring glycosyl groups
RJ36_RS07600	COG1216	Glycosyl transferase, family 2
RJ36_RS07605	COG0110	maltose O-acetyltransferase activity
RJ36_RS07610	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
RJ36_RS07615	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RJ36_RS07620	COG1051	belongs to the nudix hydrolase family
RJ36_RS07625	COG0297	glycogen (starch) synthase activity
RJ36_RS07635	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RJ36_RS07640	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RJ36_RS07645	COG2244	polysaccharide biosynthetic process
RJ36_RS07650	COG2327	Polysaccharide pyruvyl transferase
RJ36_RS07655	COG0438	transferase activity, transferring glycosyl groups
RJ36_RS07665	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RJ36_RS07670	COG1086	Polysaccharide biosynthesis protein
RJ36_RS07675	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RJ36_RS07680	COG1083	cytidylyl-transferase
RJ36_RS07690	COG2089	acid synthase
RJ36_RS07755	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RJ36_RS07760	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
RJ36_RS07760	COG0131	Imidazoleglycerol-phosphate dehydratase
RJ36_RS07770	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RJ36_RS07775	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
RJ36_RS07780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RJ36_RS07785	COG0583	DNA-binding transcription factor activity
RJ36_RS07790	COG0531	amino acid
RJ36_RS07795	COG2391	methyltransferase activity
RJ36_RS07800	COG0425	Belongs to the sulfur carrier protein TusA family
RJ36_RS07805	COG2925	Exonuclease
RJ36_RS07815	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
RJ36_RS07820	COG1289	transmembrane transporter activity
RJ36_RS07935	COG1376	ErfK ybiS ycfS ynhG family protein
RJ36_RS07945	COG0534	Mate efflux family protein
RJ36_RS07960	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RJ36_RS07965	COG0477	Major facilitator Superfamily
RJ36_RS08005	COG1114	Component of the transport system for branched-chain amino acids
RJ36_RS08010	COG0814	amino acid
RJ36_RS08040	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS08050	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
RJ36_RS08050	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
RJ36_RS08070	COG4565	transcriptional regulatory protein
RJ36_RS08075	COG3290	protein histidine kinase activity
RJ36_RS08085	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
RJ36_RS08095	COG1418	mRNA catabolic process
RJ36_RS08100	COG0270	DNA (cytosine-5-)-methyltransferase activity
RJ36_RS08105	COG3727	T/G mismatch-specific endonuclease activity
RJ36_RS08110	COG0697	spore germination
RJ36_RS08115	COG2354	Protein conserved in bacteria
RJ36_RS08120	COG5475	Uncharacterized small protein (DUF2158)
RJ36_RS08145	COG2197	response regulator
RJ36_RS08160	COG1338	Plays a role in the flagellum-specific transport system
RJ36_RS08180	COG1580	Controls the rotational direction of flagella during chemotaxis
RJ36_RS08190	COG2882	bacterial-type flagellum organization
RJ36_RS08195	COG1157	protein secretion by the type III secretion system
RJ36_RS08200	COG1317	bacterial-type flagellum organization
RJ36_RS08215	COG1677	Flagellar hook-basal body complex protein FliE
RJ36_RS08220	COG0425	Belongs to the sulfur carrier protein TusA family
RJ36_RS08225	COG2391	methyltransferase activity
RJ36_RS08235	COG0366	Alpha amylase catalytic
RJ36_RS08245	COG1516	flagellar protein fliS
RJ36_RS08250	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
RJ36_RS08270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS08280	COG0765	amino acid transport
RJ36_RS08285	COG1126	abc transporter atp-binding protein
RJ36_RS08290	COG2197	response regulator
RJ36_RS08300	COG2197	response regulator
RJ36_RS08345	COG3318	Belongs to the UPF0149 family
RJ36_RS08345	COG3012	SEC-C Motif Domain Protein
RJ36_RS08350	COG0814	amino acid
RJ36_RS08360	COG1528	Iron-storage protein
RJ36_RS08385	COG1528	Iron-storage protein
RJ36_RS08395	COG1879	ABC-type sugar transport system periplasmic component
RJ36_RS08400	COG1129	ABC transporter
RJ36_RS08405	COG1172	Belongs to the binding-protein-dependent transport system permease family
RJ36_RS08450	COG0835	chemotaxis
RJ36_RS08455	COG1301	dicarboxylic acid transport
RJ36_RS08465	COG0840	transmembrane signaling receptor activity
RJ36_RS08480	COG0745	RESPONSE REGULATOR receiver
RJ36_RS08490	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RJ36_RS08495	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RJ36_RS08510	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RJ36_RS08520	COG3102	Protein conserved in bacteria
RJ36_RS08535	COG5654	RES domain protein
RJ36_RS08540	COG0500	methyltransferase
RJ36_RS08550	COG3788	relative of glutathione S-transferase, MAPEG superfamily
RJ36_RS08555	COG1801	Protein of unknown function DUF72
RJ36_RS08560	COG1335	isochorismatase
RJ36_RS08570	COG0494	nUDIX hydrolase
RJ36_RS08575	COG0217	transcriptional regulatory protein
RJ36_RS08610	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RJ36_RS08620	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
RJ36_RS08625	COG0739	heme binding
RJ36_RS08630	COG1560	Kdo2-lipid A biosynthetic process
RJ36_RS08635	COG2211	Major facilitator Superfamily
RJ36_RS08645	COG0469	pyruvate kinase activity
RJ36_RS08650	COG1737	Transcriptional regulator
RJ36_RS08655	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
RJ36_RS08660	COG0129	dihydroxy-acid dehydratase activity
RJ36_RS08665	COG0800	Aldolase
RJ36_RS08675	COG2979	Protein of unknown function (DUF533)
RJ36_RS08680	COG1770	oligopeptidase
RJ36_RS08685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RJ36_RS08690	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RJ36_RS08700	COG2372	response to copper ion
RJ36_RS08705	COG1276	copper resistance
RJ36_RS08720	COG1442	glycosyl transferase family 8
RJ36_RS08720	COG1216	Glycosyl transferase, family 2
RJ36_RS08725	COG1560	Kdo2-lipid A biosynthetic process
RJ36_RS08740	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
RJ36_RS08740	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RJ36_RS08745	COG3008	intermembrane lipid transfer
RJ36_RS08750	COG2995	paraquat-inducible protein a
RJ36_RS08755	COG1956	GAF domain-containing protein
RJ36_RS08775	COG2814	Major facilitator Superfamily
RJ36_RS08780	COG1414	Transcriptional regulator
RJ36_RS08805	COG0768	penicillin binding
RJ36_RS08810	COG2226	methyltransferase
RJ36_RS08825	COG3716	PTS system mannose fructose sorbose family IID component
RJ36_RS08830	COG3715	PTS system
RJ36_RS08835	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS08835	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS08840	COG1253	flavin adenine dinucleotide binding
RJ36_RS08845	COG2200	EAL domain
RJ36_RS08850	COG1760	l-serine dehydratase
RJ36_RS08870	COG0251	oxidation-reduction process
RJ36_RS08875	COG1199	ATP-dependent helicase activity
RJ36_RS08880	COG1214	PFAM Peptidase M22, glycoprotease
RJ36_RS08885	COG3065	identical protein binding
RJ36_RS08895	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
RJ36_RS08905	COG2894	cell division
RJ36_RS08915	COG3100	YcgL domain-containing protein
RJ36_RS08920	COG0179	Fumarylacetoacetate (FAA) hydrolase
RJ36_RS08940	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RJ36_RS08950	COG2719	SpoVR family
RJ36_RS08970	COG1619	proteins homologs of microcin C7 resistance protein MccF
RJ36_RS08980	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
RJ36_RS08990	COG4774	siderophore transport
RJ36_RS08995	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
RJ36_RS09005	COG0439	Biotin carboxylase
RJ36_RS09050	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
RJ36_RS09055	COG0372	Belongs to the citrate synthase family
RJ36_RS09070	COG0012	GTP binding
RJ36_RS09085	COG0659	secondary active sulfate transmembrane transporter activity
RJ36_RS09110	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
RJ36_RS09115	COG2890	protein-(glutamine-N5) methyltransferase activity
RJ36_RS09150	COG0387	Pfam Sodium calcium exchanger
RJ36_RS09155	COG4572	Cation transport regulator
RJ36_RS09160	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
RJ36_RS09170	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
RJ36_RS09175	COG3707	response regulator
RJ36_RS09180	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RJ36_RS09190	COG1116	anion transmembrane transporter activity
RJ36_RS09200	COG0243	molybdopterin cofactor binding
RJ36_RS09205	COG4932	domain protein
RJ36_RS09210	COG2197	response regulator
RJ36_RS09215	COG3850	Histidine kinase
RJ36_RS09220	COG2223	nitrite transmembrane transporter activity
RJ36_RS09225	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
RJ36_RS09230	COG1140	nitrate reductase beta subunit
RJ36_RS09235	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
RJ36_RS09240	COG2181	nitrate reductase activity
RJ36_RS09255	COG0788	formyltetrahydrofolate deformylase activity
RJ36_RS09265	COG1752	Esterase of the alpha-beta hydrolase superfamily
RJ36_RS09270	COG0745	RESPONSE REGULATOR receiver
RJ36_RS09275	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RJ36_RS09285	COG1435	thymidine kinase activity
RJ36_RS09290	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS09290	COG1454	alcohol dehydrogenase
RJ36_RS09295	COG2095	MarC family integral membrane protein
RJ36_RS09300	COG4166	transmembrane transport
RJ36_RS09305	COG0601	transmembrane transport
RJ36_RS09315	COG0444	Belongs to the ABC transporter superfamily
RJ36_RS09320	COG4608	Belongs to the ABC transporter superfamily
RJ36_RS09325	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RJ36_RS09330	COG3099	Belongs to the UPF0263 family
RJ36_RS09340	COG2350	Protein conserved in bacteria
RJ36_RS09350	COG3001	Fructosamine kinase
RJ36_RS09360	COG1105	Belongs to the carbohydrate kinase PfkB family
RJ36_RS09365	COG3137	Salt-induced outer membrane protein
RJ36_RS09375	COG3477	response to acidic pH
RJ36_RS09415	COG0072	phenylalanine-tRNA ligase activity
RJ36_RS09415	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RJ36_RS09430	COG0386	Belongs to the glutathione peroxidase family
RJ36_RS09440	COG0791	NLP P60 protein
RJ36_RS09455	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RJ36_RS09460	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
RJ36_RS09465	COG0574	Belongs to the PEP-utilizing enzyme family
RJ36_RS09465	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RJ36_RS09470	COG1472	Belongs to the glycosyl hydrolase 3 family
RJ36_RS09475	COG0628	permease
RJ36_RS09480	COG0247	lactate metabolic process
RJ36_RS09480	COG0277	FAD linked oxidase domain protein
RJ36_RS09485	COG2050	protein possibly involved in aromatic compounds catabolism
RJ36_RS09500	COG0316	Belongs to the HesB IscA family
RJ36_RS09505	COG0719	Fe-S assembly protein
RJ36_RS09510	COG0396	ATPase activity
RJ36_RS09515	COG0719	Fe-S assembly protein
RJ36_RS09525	COG2166	iron-sulfur cluster assembly
RJ36_RS09530	COG1376	ErfK ybiS ycfS ynhG family protein
RJ36_RS09550	COG1309	transcriptional regulator
RJ36_RS09555	COG1082	Xylose isomerase domain protein TIM barrel
RJ36_RS09555	COG3185	4-Hydroxyphenylpyruvate dioxygenase
RJ36_RS09560	COG2271	Major facilitator Superfamily
RJ36_RS09565	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RJ36_RS09575	COG1120	ATPase activity
RJ36_RS09580	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS09585	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RJ36_RS09590	COG1414	Transcriptional regulator
RJ36_RS09605	COG0596	Alpha beta hydrolase
RJ36_RS09625	COG2814	Major facilitator Superfamily
RJ36_RS09630	COG0537	adenosine 5'-monophosphoramidase activity
RJ36_RS09635	COG5633	Lipoprotein
RJ36_RS09660	COG1252	NADH dehydrogenase
RJ36_RS09665	COG3134	Outer membrane lipoprotein
RJ36_RS09685	COG1309	transcriptional regulator
RJ36_RS09695	COG1388	LysM domain
RJ36_RS09695	COG1376	ErfK ybiS ycfS ynhG family protein
RJ36_RS09700	COG4774	siderophore transport
RJ36_RS09705	COG1120	ATPase activity
RJ36_RS09710	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS09715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS09750	COG3443	Belongs to the bacterial solute-binding protein 9 family
RJ36_RS09760	COG0307	riboflavin synthase, alpha
RJ36_RS09765	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RJ36_RS09770	COG2814	Major facilitator Superfamily
RJ36_RS09775	COG0583	DNA-binding transcription factor activity
RJ36_RS09790	COG2814	Major facilitator Superfamily
RJ36_RS09800	COG0791	NLP P60 protein
RJ36_RS09805	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
RJ36_RS09815	COG0346	lactoylglutathione lyase activity
RJ36_RS09820	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS09825	COG1309	transcriptional regulator
RJ36_RS09830	COG3313	Fe-S protein
RJ36_RS09835	COG4989	oxidoreductase activity
RJ36_RS09840	COG2032	superoxide dismutase activity
RJ36_RS09845	COG1289	transmembrane transporter activity
RJ36_RS09850	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS09865	COG3706	GGDEF domain
RJ36_RS09880	COG3895	Periplasmic Protein
RJ36_RS09895	COG0625	glutathione transferase activity
RJ36_RS09905	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RJ36_RS09915	COG4659	FMN binding
RJ36_RS09930	COG2878	Part of a membrane complex involved in electron transport
RJ36_RS09950	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS09960	COG0673	inositol 2-dehydrogenase activity
RJ36_RS09970	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
RJ36_RS09975	COG1263	PTS System
RJ36_RS09975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS09980	COG1609	Transcriptional regulator
RJ36_RS09985	COG5339	Protein conserved in bacteria
RJ36_RS09990	COG1482	cell wall glycoprotein biosynthetic process
RJ36_RS09995	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
RJ36_RS09995	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
RJ36_RS10010	COG2205	protein histidine kinase activity
RJ36_RS10015	COG0745	RESPONSE REGULATOR receiver
RJ36_RS10020	COG3136	membrane protein required for alginate biosynthesis
RJ36_RS10030	COG0531	amino acid
RJ36_RS10040	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RJ36_RS10045	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
RJ36_RS10055	COG0589	response to stress
RJ36_RS10060	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
RJ36_RS10075	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RJ36_RS10080	COG2840	Smr protein MutS2
RJ36_RS10085	COG1414	Transcriptional regulator
RJ36_RS10095	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
RJ36_RS10100	COG0183	Belongs to the thiolase family
RJ36_RS10110	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RJ36_RS10115	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RJ36_RS10145	COG0747	negative chemotaxis
RJ36_RS10155	COG3238	Protein conserved in bacteria
RJ36_RS10160	COG1247	-acetyltransferase
RJ36_RS10170	COG2130	NADP-dependent
RJ36_RS10175	COG1802	Transcriptional regulator
RJ36_RS10180	COG4772	TonB-dependent receptor
RJ36_RS10185	COG3391	amine dehydrogenase activity
RJ36_RS10215	COG0625	glutathione transferase activity
RJ36_RS10235	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RJ36_RS10240	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
RJ36_RS10245	COG2162	N-hydroxyarylamine O-acetyltransferase activity
RJ36_RS10260	COG2181	nitrate reductase activity
RJ36_RS10265	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
RJ36_RS10270	COG1140	nitrate reductase beta subunit
RJ36_RS10275	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
RJ36_RS10280	COG2223	nitrite transmembrane transporter activity
RJ36_RS10285	COG1414	Transcriptional regulator
RJ36_RS10290	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS10295	COG4829	muconolactone delta-isomerase
RJ36_RS10300	COG3485	protocatechuate 3,4-dioxygenase
RJ36_RS10305	COG4638	Rieske (2fe-2S)
RJ36_RS10330	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS10330	COG0243	molybdopterin cofactor binding
RJ36_RS10335	COG0243	molybdopterin cofactor binding
RJ36_RS10335	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS10340	COG0437	4 iron, 4 sulfur cluster binding
RJ36_RS10345	COG2864	formate dehydrogenase
RJ36_RS10355	COG2814	Major facilitator Superfamily
RJ36_RS10360	COG1064	alcohol dehydrogenase
RJ36_RS10365	COG0488	(ABC) transporter
RJ36_RS10370	COG0281	malic enzyme
RJ36_RS10375	COG1064	alcohol dehydrogenase
RJ36_RS10380	COG1764	response to oxidative stress
RJ36_RS10385	COG2175	clavaminate synthase activity
RJ36_RS10405	COG3706	GGDEF domain
RJ36_RS10410	COG0322	excinuclease ABC activity
RJ36_RS10435	COG2200	EAL domain
RJ36_RS10440	COG0789	Transcriptional regulator
RJ36_RS10450	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RJ36_RS10455	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RJ36_RS10460	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RJ36_RS10465	COG2080	2 iron, 2 sulfur cluster binding
RJ36_RS10470	COG3210	domain, Protein
RJ36_RS10470	COG2911	Protein conserved in bacteria
RJ36_RS10475	COG1396	sequence-specific DNA binding
RJ36_RS10480	COG3550	peptidyl-serine autophosphorylation
RJ36_RS10495	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RJ36_RS10500	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS10505	COG0076	glutamate decarboxylase activity
RJ36_RS10510	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RJ36_RS10515	COG0527	aspartate kinase activity
RJ36_RS10520	COG4628	conserved protein (DUF2132)
RJ36_RS10525	COG1649	PFAM Uncharacterised BCR, COG1649
RJ36_RS10530	COG1652	LysM domain
RJ36_RS10535	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
RJ36_RS10540	COG1116	anion transmembrane transporter activity
RJ36_RS10545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RJ36_RS10550	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RJ36_RS10560	COG3781	membrane
RJ36_RS10565	COG0246	Mannitol dehydrogenase
RJ36_RS10585	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS10590	COG0583	DNA-binding transcription factor activity
RJ36_RS10605	COG1349	DNA-binding transcription factor activity
RJ36_RS10610	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
RJ36_RS10615	COG3395	kinase activity
RJ36_RS10620	COG1454	alcohol dehydrogenase
RJ36_RS10625	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RJ36_RS10630	COG0861	Integral membrane protein TerC family
RJ36_RS10680	COG0697	spore germination
RJ36_RS10685	COG2814	Major facilitator Superfamily
RJ36_RS10700	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
RJ36_RS10705	COG0339	signal peptide processing
RJ36_RS10710	COG4221	oxidoreductase activity
RJ36_RS10715	COG1802	Transcriptional regulator
RJ36_RS10730	COG0246	Mannitol dehydrogenase
RJ36_RS10735	COG0477	Major facilitator Superfamily
RJ36_RS10740	COG1063	alcohol dehydrogenase
RJ36_RS10745	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS10760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RJ36_RS10775	COG0243	molybdopterin cofactor binding
RJ36_RS10780	COG0243	molybdopterin cofactor binding
RJ36_RS10785	COG0437	4 iron, 4 sulfur cluster binding
RJ36_RS10790	COG3302	dmso reductase anchor subunit
RJ36_RS10825	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
RJ36_RS10830	COG1940	carbohydrate kinase activity
RJ36_RS10835	COG0583	DNA-binding transcription factor activity
RJ36_RS10840	COG2814	Major facilitator Superfamily
RJ36_RS10850	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
RJ36_RS10860	COG3591	Belongs to the peptidase S1B family
RJ36_RS10870	COG2076	Multidrug Resistance protein
RJ36_RS10880	COG0628	permease
RJ36_RS10895	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RJ36_RS10905	COG3264	Mechanosensitive ion channel
RJ36_RS10905	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
RJ36_RS10910	COG2015	COG2015, Alkyl sulfatase and related hydrolases
RJ36_RS10925	COG2067	long-chain fatty acid transport protein
RJ36_RS10930	COG2015	COG2015, Alkyl sulfatase and related hydrolases
RJ36_RS10970	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS10975	COG1177	transmembrane transport
RJ36_RS10980	COG1176	ABC-type spermidine putrescine transport system, permease component I
RJ36_RS10985	COG3842	ATPase activity
RJ36_RS10990	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RJ36_RS10995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RJ36_RS11020	COG1271	oxidase subunit
RJ36_RS11025	COG1294	oxidase, subunit
RJ36_RS11050	COG0826	peptidase U32
RJ36_RS11055	COG1396	sequence-specific DNA binding
RJ36_RS11060	COG3135	benzoate transporter
RJ36_RS11080	COG0500	methyltransferase
RJ36_RS11085	COG1275	C4-dicarboxylate transporter malic acid transport protein
RJ36_RS11090	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RJ36_RS11095	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RJ36_RS11110	COG2272	Belongs to the type-B carboxylesterase lipase family
RJ36_RS11115	COG5383	Protein conserved in bacteria
RJ36_RS11120	COG3485	protocatechuate 3,4-dioxygenase
RJ36_RS11125	COG3485	protocatechuate 3,4-dioxygenase
RJ36_RS11130	COG0583	DNA-binding transcription factor activity
RJ36_RS11135	COG4993	Dehydrogenase
RJ36_RS11140	COG0840	transmembrane signaling receptor activity
RJ36_RS11165	COG3038	cytochrome b561
RJ36_RS11170	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RJ36_RS11175	COG1434	Gram-negative-bacterium-type cell wall biogenesis
RJ36_RS11185	COG1643	Atp-dependent helicase
RJ36_RS11195	COG0667	Aldo Keto reductase
RJ36_RS11200	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RJ36_RS11205	COG3327	negative regulation of DNA-templated transcription, initiation
RJ36_RS11210	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
RJ36_RS11215	COG0183	Belongs to the thiolase family
RJ36_RS11220	COG2050	protein possibly involved in aromatic compounds catabolism
RJ36_RS11225	COG1250	3-hydroxyacyl-CoA dehydrogenase
RJ36_RS11230	COG1024	Enoyl-CoA hydratase
RJ36_RS11235	COG1024	Enoyl-CoA hydratase
RJ36_RS11240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RJ36_RS11245	COG2151	metal-sulfur cluster biosynthetic enzyme
RJ36_RS11250	COG3396	Phenylacetate-CoA oxygenase
RJ36_RS11255	COG3460	Phenylacetate-CoA oxygenase
RJ36_RS11260	COG3396	Phenylacetate-CoA oxygenase
RJ36_RS11265	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS11265	COG2030	dehydratase
RJ36_RS11270	COG3733	amine oxidase
RJ36_RS11275	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS11280	COG2207	Transcriptional regulator
RJ36_RS11285	COG3784	Protein of unknown function (DUF1318)
RJ36_RS11295	COG2911	Protein conserved in bacteria
RJ36_RS11300	COG1349	DNA-binding transcription factor activity
RJ36_RS11305	COG0698	ribose 5-phosphate isomerase
RJ36_RS11310	COG3775	system Galactitol-specific IIC component
RJ36_RS11315	COG3414	Phosphotransferase system galactitol-specific IIB component
RJ36_RS11325	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RJ36_RS11330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RJ36_RS11340	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
RJ36_RS11345	COG0366	Alpha amylase catalytic
RJ36_RS11350	COG0395	ABC-type sugar transport system, permease component
RJ36_RS11365	COG1609	Transcriptional regulator
RJ36_RS11375	COG3842	ATPase activity
RJ36_RS11380	COG3187	Heat shock protein
RJ36_RS11385	COG0674	pyruvate-flavodoxin oxidoreductase activity
RJ36_RS11385	COG1013	pyruvate-flavodoxin oxidoreductase activity
RJ36_RS11385	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RJ36_RS11385	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
RJ36_RS11390	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
RJ36_RS11405	COG1305	Transglutaminase-like
RJ36_RS11420	COG5562	phage envelope protein
RJ36_RS11430	COG2801	Transposase and inactivated derivatives
RJ36_RS11430	COG3415	Transposase
RJ36_RS11455	COG0582	viral genome integration into host DNA
RJ36_RS11465	COG0513	Belongs to the DEAD box helicase family
RJ36_RS11485	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
RJ36_RS11490	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS11500	COG4166	transmembrane transport
RJ36_RS11505	COG2866	Carboxypeptidase
RJ36_RS11510	COG4948	Mandelate Racemase Muconate Lactonizing
RJ36_RS11515	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
RJ36_RS11530	COG3106	COG3106 Predicted ATPase
RJ36_RS11540	COG1983	PspC domain protein
RJ36_RS11550	COG1842	Phage shock protein A
RJ36_RS11555	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
RJ36_RS11560	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RJ36_RS11565	COG2199	diguanylate cyclase activity
RJ36_RS11565	COG2203	Gaf domain
RJ36_RS11595	COG4171	peptide transport system, permease
RJ36_RS11615	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RJ36_RS11615	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RJ36_RS11630	COG1349	DNA-binding transcription factor activity
RJ36_RS11640	COG0023	Translation Initiation Factor
RJ36_RS11650	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
RJ36_RS11655	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
RJ36_RS11660	COG0671	phosphoesterase, PA-phosphatase related
RJ36_RS11670	COG3842	ATPase activity
RJ36_RS11675	COG0395	ABC-type sugar transport system, permease component
RJ36_RS11680	COG1175	transmembrane transport
RJ36_RS11710	COG0616	signal peptide processing
RJ36_RS11715	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS11720	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
RJ36_RS11725	COG4771	TonB-dependent receptor
RJ36_RS11730	COG1187	pseudouridine synthase activity
RJ36_RS11735	COG0009	L-threonylcarbamoyladenylate synthase
RJ36_RS11740	COG0613	PHP domain protein
RJ36_RS11750	COG0512	Glutamine amidotransferase of anthranilate synthase
RJ36_RS11750	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RJ36_RS11755	COG0135	phosphoribosylanthranilate isomerase activity
RJ36_RS11755	COG0134	indole-3-glycerol-phosphate synthase activity
RJ36_RS11765	COG0159	tryptophan synthase activity
RJ36_RS11770	COG3706	GGDEF domain
RJ36_RS11775	COG3706	GGDEF domain
RJ36_RS11780	COG3047	cAMP biosynthetic process
RJ36_RS11805	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
RJ36_RS11850	COG1733	regulation of RNA biosynthetic process
RJ36_RS11960	COG5484	DNA packaging
RJ36_RS11960	COG3728	DNA packaging
RJ36_RS12005	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
RJ36_RS12035	COG3479	Phenolic acid decarboxylase
RJ36_RS12175	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RJ36_RS12180	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS12185	COG1988	membrane-bound metal-dependent
RJ36_RS12190	COG1823	symporter activity
RJ36_RS12200	COG0753	catalase activity
RJ36_RS12210	COG1486	melibiose metabolic process
RJ36_RS12215	COG2169	Transcriptional regulator
RJ36_RS12215	COG1917	Cupin 2, conserved barrel domain protein
RJ36_RS12220	COG1447	Phosphotransferase system cellobiose-specific component IIA
RJ36_RS12225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS12230	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS12235	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RJ36_RS12240	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
RJ36_RS12245	COG3678	ATP-independent chaperone mediated protein folding
RJ36_RS12255	COG3724	N-succinylarginine dihydrolase activity
RJ36_RS12265	COG3138	arginine N-succinyltransferase
RJ36_RS12280	COG0708	Exodeoxyribonuclease III
RJ36_RS12285	COG0398	Pfam SNARE associated Golgi protein
RJ36_RS12290	COG0398	Pfam SNARE associated Golgi protein
RJ36_RS12295	COG4134	Bacterial extracellular solute-binding protein
RJ36_RS12300	COG4135	transport system, permease component
RJ36_RS12305	COG4136	ATPase activity
RJ36_RS12310	COG2897	thiosulfate sulfurtransferase activity
RJ36_RS12320	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RJ36_RS12325	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RJ36_RS12330	COG0494	nUDIX hydrolase
RJ36_RS12340	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
RJ36_RS12350	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RJ36_RS12355	COG0709	Synthesizes selenophosphate from selenide and ATP
RJ36_RS12365	COG0778	Nitroreductase
RJ36_RS12370	COG0616	signal peptide processing
RJ36_RS12375	COG0252	asparaginase activity
RJ36_RS12380	COG1335	isochorismatase
RJ36_RS12395	COG0477	Major facilitator Superfamily
RJ36_RS12405	COG2011	ABC-type metal ion transport system permease component
RJ36_RS12410	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RJ36_RS12425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RJ36_RS12435	COG3139	Protein of unknown function (DUF1315)
RJ36_RS12455	COG0656	L-ascorbic acid biosynthetic process
RJ36_RS12460	COG3713	MltA-interacting MipA family protein
RJ36_RS12465	COG2766	serine protein kinase
RJ36_RS12480	COG2199	diguanylate cyclase activity
RJ36_RS12485	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RJ36_RS12495	COG2207	Transcriptional regulator
RJ36_RS12500	COG2807	transmembrane transport
RJ36_RS12505	COG0504	CTP synthase activity
RJ36_RS12510	COG3189	MarR family transcriptional regulator
RJ36_RS12520	COG3042	response to heat
RJ36_RS12525	COG2199	diguanylate cyclase activity
RJ36_RS12525	COG2203	Gaf domain
RJ36_RS12535	COG3706	GGDEF domain
RJ36_RS12540	COG3182	Iron-regulated membrane protein
RJ36_RS12545	COG3615	Tellurite resistance protein tehB
RJ36_RS12550	COG3615	Tellurite resistance protein tehB
RJ36_RS12565	COG4773	Receptor
RJ36_RS12580	COG0538	isocitrate dehydrogenase activity
RJ36_RS12605	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
RJ36_RS12610	COG2200	EAL domain
RJ36_RS12625	COG2850	peptidyl-arginine hydroxylation
RJ36_RS12645	COG1177	transmembrane transport
RJ36_RS12655	COG2188	Transcriptional regulator
RJ36_RS12660	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS12665	COG1472	Belongs to the glycosyl hydrolase 3 family
RJ36_RS12670	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
RJ36_RS12680	COG4591	ABC-type transport system involved in lipoprotein release permease component
RJ36_RS12685	COG1136	(ABC) transporter
RJ36_RS12690	COG4591	ABC-type transport system involved in lipoprotein release permease component
RJ36_RS12695	COG4763	Acyl-transferase
RJ36_RS12700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RJ36_RS12705	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS12705	COG1263	PTS System
RJ36_RS12710	COG0084	hydrolase, TatD family'
RJ36_RS12715	COG0470	DNA polymerase III
RJ36_RS12725	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RJ36_RS12730	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RJ36_RS12735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RJ36_RS12740	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RJ36_RS12745	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS12750	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RJ36_RS12755	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RJ36_RS12770	COG1399	metal-binding, possibly nucleic acid-binding protein
RJ36_RS12785	COG1530	ribonuclease E activity
RJ36_RS12790	COG0583	DNA-binding transcription factor activity
RJ36_RS12795	COG2814	Major facilitator Superfamily
RJ36_RS12800	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RJ36_RS12805	COG1256	bacterial-type flagellum assembly
RJ36_RS12835	COG1749	Flagellar hook protein flgE
RJ36_RS12845	COG1558	bacterial-type flagellum-dependent cell motility
RJ36_RS12870	COG0728	peptidoglycan biosynthetic process
RJ36_RS12885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RJ36_RS12925	COG1560	Kdo2-lipid A biosynthetic process
RJ36_RS12940	COG5645	(Lipo)protein
RJ36_RS13005	COG3381	protein complex oligomerization
RJ36_RS13015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RJ36_RS13025	COG0583	DNA-binding transcription factor activity
RJ36_RS13035	COG1335	isochorismatase
RJ36_RS13045	COG1702	phosphate starvation-inducible protein PhoH
RJ36_RS13050	COG2837	iron assimilation
RJ36_RS13065	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RJ36_RS13070	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RJ36_RS13070	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RJ36_RS13070	COG0506	proline dehydrogenase activity
RJ36_RS13095	COG0791	NLP P60 protein
RJ36_RS13100	COG0534	Mate efflux family protein
RJ36_RS13110	COG1309	transcriptional regulator
RJ36_RS13120	COG3729	General stress protein
RJ36_RS13125	COG1982	Orn Lys Arg decarboxylase major
RJ36_RS13130	COG0531	amino acid
RJ36_RS13160	COG0765	amino acid transport
RJ36_RS13165	COG0765	amino acid transport
RJ36_RS13175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS13190	COG2011	ABC-type metal ion transport system permease component
RJ36_RS13220	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RJ36_RS13225	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RJ36_RS13235	COG0583	DNA-binding transcription factor activity
RJ36_RS13265	COG0439	Biotin carboxylase
RJ36_RS13270	COG3665	Urea carboxylase-associated protein
RJ36_RS13280	COG3842	ATPase activity
RJ36_RS13300	COG0589	response to stress
RJ36_RS13305	COG1116	anion transmembrane transporter activity
RJ36_RS13310	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RJ36_RS13325	COG2515	1-aminocyclopropane-1-carboxylate deaminase
RJ36_RS13330	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RJ36_RS13335	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RJ36_RS13340	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS13345	COG1396	sequence-specific DNA binding
RJ36_RS13345	COG1917	Cupin 2, conserved barrel domain protein
RJ36_RS13350	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RJ36_RS13355	COG0174	glutamine synthetase
RJ36_RS13360	COG0531	amino acid
RJ36_RS13395	COG0251	oxidation-reduction process
RJ36_RS13430	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
RJ36_RS13440	COG0579	oxidoreductase
RJ36_RS13445	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS13450	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RJ36_RS13455	COG1113	amino acid transport
RJ36_RS13460	COG1802	Transcriptional regulator
RJ36_RS13475	COG1942	4-Oxalocrotonate Tautomerase
RJ36_RS13480	COG0477	Major facilitator Superfamily
RJ36_RS13485	COG0583	DNA-binding transcription factor activity
RJ36_RS13490	COG0628	permease
RJ36_RS13500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RJ36_RS13515	COG2207	Transcriptional regulator
RJ36_RS13520	COG0583	DNA-binding transcription factor activity
RJ36_RS13545	COG2066	Belongs to the glutaminase family
RJ36_RS13550	COG0583	DNA-binding transcription factor activity
RJ36_RS13560	COG0583	DNA-binding transcription factor activity
RJ36_RS13570	COG3088	subunit of a heme lyase
RJ36_RS13570	COG4235	cytochrome complex assembly
RJ36_RS13575	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RJ36_RS13580	COG1138	Cytochrome C-type biogenesis protein
RJ36_RS13590	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RJ36_RS13595	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RJ36_RS13600	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RJ36_RS13605	COG4133	protoheme IX ABC transporter activity
RJ36_RS13625	COG2259	Doxx family
RJ36_RS13630	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
RJ36_RS13650	COG0670	Belongs to the BI1 family
RJ36_RS13675	COG0583	DNA-binding transcription factor activity
RJ36_RS13685	COG1832	CoA-binding protein
RJ36_RS13695	COG0210	DNA helicase
RJ36_RS13700	COG3304	Inner membrane component domain
RJ36_RS13705	COG1289	transmembrane transporter activity
RJ36_RS13710	COG3070	regulator of competence-specific genes
RJ36_RS13720	COG2885	chlorophyll binding
RJ36_RS13720	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
RJ36_RS13730	COG1067	ATP-dependent peptidase activity
RJ36_RS13740	COG3009	Protein conserved in bacteria
RJ36_RS13745	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
RJ36_RS13745	COG3008	intermembrane lipid transfer
RJ36_RS13750	COG2995	paraquat-inducible protein a
RJ36_RS13755	COG0488	(ABC) transporter
RJ36_RS13765	COG0633	Ferredoxin
RJ36_RS13765	COG3217	Mosc domain protein beta barrel domain protein
RJ36_RS13780	COG3121	Chaperone
RJ36_RS13785	COG3539	Fimbrial protein
RJ36_RS13790	COG3539	Fimbrial protein
RJ36_RS13795	COG3539	Fimbrial protein
RJ36_RS13800	COG3188	usher protein
RJ36_RS13805	COG3121	Chaperone
RJ36_RS13810	COG3539	Fimbrial protein
RJ36_RS13815	COG0431	NADPH-dependent FMN reductase
RJ36_RS13820	COG0308	aminopeptidase N
RJ36_RS13835	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
RJ36_RS13840	COG1448	Aminotransferase
RJ36_RS13845	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RJ36_RS13850	COG3108	Peptidase M15
RJ36_RS13855	COG2989	Protein conserved in bacteria
RJ36_RS13865	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
RJ36_RS13875	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RJ36_RS13880	COG1434	Gram-negative-bacterium-type cell wall biogenesis
RJ36_RS13885	COG3173	Aminoglycoside phosphotransferase
RJ36_RS13895	COG2835	tetraacyldisaccharide 4'-kinase activity
RJ36_RS13900	COG3214	Protein conserved in bacteria
RJ36_RS13915	COG2333	competence protein COMEC
RJ36_RS13915	COG0658	competence protein
RJ36_RS13925	COG0539	negative regulation of cytoplasmic translation
RJ36_RS13935	COG0501	Belongs to the peptidase M48B family
RJ36_RS13950	COG2323	membrane
RJ36_RS13955	COG1944	ATP diphosphatase activity
RJ36_RS13960	COG2116	formate transmembrane transporter activity
RJ36_RS13965	COG1882	Formate acetyltransferase
RJ36_RS13970	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RJ36_RS13985	COG0477	Major facilitator Superfamily
RJ36_RS13990	COG3302	dmso reductase anchor subunit
RJ36_RS13995	COG0437	4 iron, 4 sulfur cluster binding
RJ36_RS14000	COG0243	molybdopterin cofactor binding
RJ36_RS14010	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RJ36_RS14030	COG0492	ferredoxin-NADP+ reductase activity
RJ36_RS14035	COG4988	ABC transporter
RJ36_RS14040	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
RJ36_RS14050	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
RJ36_RS14055	COG0542	response to heat
RJ36_RS14065	COG1278	Cold shock
RJ36_RS14075	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS14080	COG2990	Protein conserved in bacteria
RJ36_RS14085	COG3593	DNA synthesis involved in DNA repair
RJ36_RS14095	COG2431	L-lysine efflux transmembrane transporter activity
RJ36_RS14105	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RJ36_RS14110	COG0028	Belongs to the TPP enzyme family
RJ36_RS14115	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
RJ36_RS14120	COG0702	epimerase
RJ36_RS14125	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RJ36_RS14130	COG3023	N-Acetylmuramoyl-L-alanine amidase
RJ36_RS14145	COG1126	abc transporter atp-binding protein
RJ36_RS14150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS14155	COG4215	(ABC) transporter
RJ36_RS14160	COG4160	amino acid transport
RJ36_RS14165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS14170	COG5002	protein histidine kinase activity
RJ36_RS14175	COG0745	RESPONSE REGULATOR receiver
RJ36_RS14190	COG1177	transmembrane transport
RJ36_RS14195	COG1176	ABC-type spermidine putrescine transport system, permease component I
RJ36_RS14200	COG3842	ATPase activity
RJ36_RS14205	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RJ36_RS14220	COG0778	Nitroreductase
RJ36_RS14245	COG3226	Transcriptional regulator
RJ36_RS14250	COG0738	Major facilitator superfamily
RJ36_RS14255	COG0561	phosphatase activity
RJ36_RS14260	COG2814	Major facilitator Superfamily
RJ36_RS14265	COG0671	phosphoesterase, PA-phosphatase related
RJ36_RS14270	COG1349	DNA-binding transcription factor activity
RJ36_RS14285	COG1686	Belongs to the peptidase S11 family
RJ36_RS14290	COG0625	glutathione transferase activity
RJ36_RS14295	COG1609	Transcriptional regulator
RJ36_RS14310	COG2133	pyrroloquinoline quinone binding
RJ36_RS14330	COG3122	Protein conserved in bacteria
RJ36_RS14350	COG0747	negative chemotaxis
RJ36_RS14360	COG1446	asparaginase
RJ36_RS14365	COG0303	'Molybdopterin
RJ36_RS14370	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
RJ36_RS14375	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RJ36_RS14380	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RJ36_RS14385	COG1882	Formate acetyltransferase
RJ36_RS14390	COG5464	transposase or invertase
RJ36_RS14395	COG0561	phosphatase activity
RJ36_RS14405	COG1609	Transcriptional regulator
RJ36_RS14410	COG2271	Major facilitator Superfamily
RJ36_RS14425	COG0488	(ABC) transporter
RJ36_RS14430	COG1376	ErfK ybiS ycfS ynhG family protein
RJ36_RS14435	COG2188	Transcriptional regulator
RJ36_RS14440	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS14445	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
RJ36_RS14450	COG1321	iron dependent repressor
RJ36_RS14460	COG2194	sulfuric ester hydrolase activity
RJ36_RS14465	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
RJ36_RS14480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RJ36_RS14485	COG0765	amino acid transport
RJ36_RS14490	COG1126	abc transporter atp-binding protein
RJ36_RS14495	COG0668	transmembrane transport
RJ36_RS14505	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RJ36_RS14525	COG2723	6-phospho-beta-galactosidase activity
RJ36_RS14535	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RJ36_RS14575	COG3188	usher protein
RJ36_RS14585	COG4774	siderophore transport
RJ36_RS14595	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
RJ36_RS14605	COG3501	Rhs element vgr protein
RJ36_RS14610	COG1388	LysM domain
RJ36_RS14610	COG0791	NLP P60 protein
RJ36_RS14635	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RJ36_RS14640	COG1199	ATP-dependent helicase activity
RJ36_RS14645	COG0513	Belongs to the DEAD box helicase family
RJ36_RS14650	COG1309	transcriptional regulator
RJ36_RS14655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS14660	COG1131	(ABC) transporter
RJ36_RS14665	COG0842	Transport permease protein
RJ36_RS14670	COG0842	Transport permease protein
RJ36_RS14680	COG3568	Endonuclease Exonuclease Phosphatase
RJ36_RS14685	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RJ36_RS14690	COG0392	lysyltransferase activity
RJ36_RS14710	COG0670	Belongs to the BI1 family
RJ36_RS14715	COG0314	molybdopterin synthase activity
RJ36_RS14720	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
RJ36_RS14730	COG0521	Mo-molybdopterin cofactor biosynthetic process
RJ36_RS14775	COG2226	methyltransferase
RJ36_RS14790	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
RJ36_RS14795	COG1881	PFAM PEBP family protein
RJ36_RS14800	COG4677	pectinesterase activity
RJ36_RS14810	COG0583	DNA-binding transcription factor activity
RJ36_RS14815	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RJ36_RS14820	COG0561	phosphatase activity
RJ36_RS14830	COG4149	molybdate abc transporter
RJ36_RS14835	COG0725	ABC transporter, periplasmic molybdate-binding protein
RJ36_RS14845	COG2005	Transcriptional regulator
RJ36_RS14845	COG3585	molybdate ion transport
RJ36_RS14850	COG1119	ATPase activity
RJ36_RS14860	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RJ36_RS14865	COG1085	galactose-1-phosphate uridylyltransferase
RJ36_RS14875	COG2017	converts alpha-aldose to the beta-anomer
RJ36_RS14885	COG1120	ATPase activity
RJ36_RS14890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS14905	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RJ36_RS14915	COG1230	cation diffusion facilitator family transporter
RJ36_RS14925	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
RJ36_RS14965	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
RJ36_RS14970	COG2885	chlorophyll binding
RJ36_RS14980	COG3064	Membrane
RJ36_RS14985	COG0848	biopolymer transport protein
RJ36_RS14990	COG0811	peptide transport
RJ36_RS14995	COG0824	Thioesterase
RJ36_RS15000	COG3790	cyd operon protein YbgE
RJ36_RS15005	COG1294	oxidase, subunit
RJ36_RS15010	COG1271	oxidase subunit
RJ36_RS15015	COG0383	alpha-mannosidase activity
RJ36_RS15020	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS15020	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS15020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS15025	COG2188	Transcriptional regulator
RJ36_RS15035	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RJ36_RS15045	COG0508	dehydrogenase complex catalyzes the overall conversion of
RJ36_RS15050	COG0567	Dehydrogenase, E1 component
RJ36_RS15060	COG1053	succinate dehydrogenase
RJ36_RS15065	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
RJ36_RS15070	COG2009	succinate dehydrogenase
RJ36_RS15075	COG0372	Belongs to the citrate synthase family
RJ36_RS15080	COG3157	Type VI secretion system effector, Hcp
RJ36_RS15115	COG1984	allophanate hydrolase subunit 2
RJ36_RS15120	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
RJ36_RS15125	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RJ36_RS15135	COG0415	Belongs to the DNA photolyase family
RJ36_RS15140	COG3272	Protein of unknown function (DUF1722)
RJ36_RS15155	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
RJ36_RS15165	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
RJ36_RS15170	COG2205	protein histidine kinase activity
RJ36_RS15175	COG0745	RESPONSE REGULATOR receiver
RJ36_RS15180	COG1982	Orn Lys Arg decarboxylase major
RJ36_RS15185	COG0033	Phosphoglucomutase
RJ36_RS15190	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
RJ36_RS15195	COG0596	Alpha beta hydrolase
RJ36_RS15205	COG0716	FMN binding
RJ36_RS15210	COG0735	belongs to the Fur family
RJ36_RS15215	COG0583	DNA-binding transcription factor activity
RJ36_RS15220	COG1053	succinate dehydrogenase
RJ36_RS15250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS15250	COG2190	(PTS) system
RJ36_RS15250	COG1263	PTS System
RJ36_RS15260	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RJ36_RS15265	COG1940	carbohydrate kinase activity
RJ36_RS15265	COG1846	Transcriptional regulator
RJ36_RS15270	COG0647	UMP catabolic process
RJ36_RS15275	COG0367	asparagine synthase
RJ36_RS15325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RJ36_RS15335	COG1702	phosphate starvation-inducible protein PhoH
RJ36_RS15340	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
RJ36_RS15345	COG4535	Mg2 and Co2 transporter CorC
RJ36_RS15360	COG0765	amino acid transport
RJ36_RS15365	COG0765	amino acid transport
RJ36_RS15370	COG1126	abc transporter atp-binding protein
RJ36_RS15380	COG2888	peptidyl-tyrosine sulfation
RJ36_RS15395	COG1466	dna polymerase III delta subunit
RJ36_RS15405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RJ36_RS15410	COG0406	alpha-ribazole phosphatase activity
RJ36_RS15415	COG0799	negative regulation of ribosome biogenesis
RJ36_RS15425	COG0768	penicillin binding
RJ36_RS15430	COG0772	Belongs to the SEDS family
RJ36_RS15435	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RJ36_RS15440	COG1686	Belongs to the peptidase S11 family
RJ36_RS15455	COG0583	DNA-binding transcription factor activity
RJ36_RS15465	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RJ36_RS15470	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RJ36_RS15490	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RJ36_RS15495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS15520	COG3069	C4-dicarboxylate transmembrane transporter activity
RJ36_RS15525	COG3719	Belongs to the RNase T2 family
RJ36_RS15530	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RJ36_RS15535	COG0589	response to stress
RJ36_RS15540	COG3634	alkyl hydroperoxide reductase activity
RJ36_RS15550	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RJ36_RS15555	COG0583	DNA-binding transcription factor activity
RJ36_RS15560	COG3969	phosphoadenosine phosphosulfate
RJ36_RS15565	COG1475	DNA binding
RJ36_RS15570	COG0436	Aminotransferase
RJ36_RS15575	COG0371	Dehydrogenase
RJ36_RS15590	COG2879	small protein
RJ36_RS15595	COG1966	Carbon starvation protein
RJ36_RS15600	COG2050	protein possibly involved in aromatic compounds catabolism
RJ36_RS15605	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS15610	COG3433	isochorismatase activity
RJ36_RS15610	COG1535	isochorismatase
RJ36_RS15615	COG1021	2,3-dihydroxybenzoate-AMP ligase
RJ36_RS15620	COG1169	isochorismate synthase
RJ36_RS15625	COG4592	Periplasmic binding protein
RJ36_RS15630	COG0477	Major facilitator Superfamily
RJ36_RS15635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS15640	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS15645	COG1120	ATPase activity
RJ36_RS15650	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
RJ36_RS15655	COG0438	transferase activity, transferring glycosyl groups
RJ36_RS15660	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RJ36_RS15660	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
RJ36_RS15665	COG3251	PFAM MbtH domain protein
RJ36_RS15670	COG2382	esterase
RJ36_RS15675	COG4771	TonB-dependent receptor
RJ36_RS15680	COG2977	Belongs to the P-Pant transferase superfamily
RJ36_RS15685	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS15690	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
RJ36_RS15695	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
RJ36_RS15700	COG3698	Phosphodiester glycosidase
RJ36_RS15735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RJ36_RS15740	COG2315	Protein conserved in bacteria
RJ36_RS15745	COG0778	Nitroreductase
RJ36_RS15750	COG0668	transmembrane transport
RJ36_RS15775	COG3501	Rhs element vgr protein
RJ36_RS15780	COG1113	amino acid transport
RJ36_RS15795	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
RJ36_RS15800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RJ36_RS15805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RJ36_RS15820	COG1126	abc transporter atp-binding protein
RJ36_RS15825	COG0765	amino acid transport
RJ36_RS15835	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS15840	COG4977	sequence-specific DNA binding
RJ36_RS15850	COG1902	pentaerythritol trinitrate reductase activity
RJ36_RS15855	COG1053	succinate dehydrogenase
RJ36_RS15860	COG2771	luxR family
RJ36_RS15870	COG1227	inorganic diphosphatase activity
RJ36_RS15925	COG2501	S4 domain
RJ36_RS15940	COG2190	(PTS) system
RJ36_RS15940	COG1263	PTS System
RJ36_RS15940	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS15945	COG1609	Transcriptional regulator
RJ36_RS15950	COG1988	membrane-bound metal-dependent
RJ36_RS15960	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RJ36_RS15970	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
RJ36_RS15975	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
RJ36_RS15995	COG1464	Belongs to the NlpA lipoprotein family
RJ36_RS16005	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
RJ36_RS16010	COG4181	ATPase activity
RJ36_RS16015	COG2755	lipolytic protein G-D-S-L family
RJ36_RS16020	COG0300	oxidoreductase activity
RJ36_RS16025	COG3118	belongs to the thioredoxin family
RJ36_RS16030	COG0390	transport system, permease component
RJ36_RS16035	COG4619	ABC transporter
RJ36_RS16060	COG0330	HflC and HflK could
RJ36_RS16065	COG1585	Membrane protein implicated in regulation of membrane protease activity
RJ36_RS16080	COG3721	Heme iron utilization protein
RJ36_RS16095	COG3735	TraB family
RJ36_RS16100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RJ36_RS16110	COG2223	nitrite transmembrane transporter activity
RJ36_RS16115	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RJ36_RS16115	COG4651	solute:proton antiporter activity
RJ36_RS16120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RJ36_RS16130	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RJ36_RS16160	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
RJ36_RS16165	COG2832	Protein of unknown function (DUF454)
RJ36_RS16170	COG3923	Primosomal replication protein n
RJ36_RS16180	COG3264	Mechanosensitive ion channel
RJ36_RS16180	COG1196	nuclear chromosome segregation
RJ36_RS16185	COG1309	transcriptional regulator
RJ36_RS16190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS16195	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RJ36_RS16210	COG0110	maltose O-acetyltransferase activity
RJ36_RS16255	COG2011	ABC-type metal ion transport system permease component
RJ36_RS16260	COG4943	cyclic-guanylate-specific phosphodiesterase activity
RJ36_RS16270	COG5507	3-demethylubiquinone-9 3-methyltransferase
RJ36_RS16275	COG2364	Membrane
RJ36_RS16295	COG3695	enzyme binding
RJ36_RS16300	COG3126	Type III secretion system lipoprotein chaperone (YscW)
RJ36_RS16305	COG1946	Acyl-CoA thioesterase
RJ36_RS16310	COG0004	ammonium transporteR
RJ36_RS16315	COG0347	Belongs to the P(II) protein family
RJ36_RS16320	COG1132	(ABC) transporter
RJ36_RS16325	COG1132	(ABC) transporter
RJ36_RS16330	COG1522	sequence-specific DNA binding
RJ36_RS16340	COG0561	phosphatase activity
RJ36_RS16345	COG4533	DNA binding
RJ36_RS16355	COG0824	Thioesterase
RJ36_RS16360	COG1555	photosystem II stabilization
RJ36_RS16365	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RJ36_RS16370	COG0776	regulation of translation
RJ36_RS16375	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
RJ36_RS16395	COG0271	Belongs to the BolA IbaG family
RJ36_RS16400	COG3056	Lipoprotein
RJ36_RS16405	COG2223	nitrite transmembrane transporter activity
RJ36_RS16410	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RJ36_RS16415	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RJ36_RS16420	COG1845	cytochrome c oxidase, subunit III
RJ36_RS16425	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
RJ36_RS16450	COG1414	Transcriptional regulator
RJ36_RS16455	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RJ36_RS16460	COG1053	succinate dehydrogenase
RJ36_RS16470	COG1053	succinate dehydrogenase
RJ36_RS16485	COG0673	inositol 2-dehydrogenase activity
RJ36_RS16490	COG2814	Major facilitator Superfamily
RJ36_RS16500	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
RJ36_RS16515	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS16520	COG1486	melibiose metabolic process
RJ36_RS16525	COG0363	glucosamine-6-phosphate deaminase activity
RJ36_RS16530	COG2188	Transcriptional regulator
RJ36_RS16545	COG0142	geranyltranstransferase activity
RJ36_RS16555	COG0667	Aldo Keto reductase
RJ36_RS16560	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
RJ36_RS16570	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RJ36_RS16580	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RJ36_RS16580	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RJ36_RS16590	COG4238	major outer membrane lipoprotein
RJ36_RS16595	COG3248	Nucleoside-binding outer membrane protein
RJ36_RS16610	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RJ36_RS16620	COG1862	Preprotein translocase
RJ36_RS16630	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
RJ36_RS16635	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
RJ36_RS16640	COG0450	alkyl hydroperoxide reductase
RJ36_RS16655	COG1574	metal-dependent hydrolase with the TIM-barrel fold
RJ36_RS16665	COG1335	isochorismatase
RJ36_RS16670	COG0583	DNA-binding transcription factor activity
RJ36_RS16675	COG0366	Alpha amylase catalytic
RJ36_RS16690	COG5002	protein histidine kinase activity
RJ36_RS16700	COG0420	3'-5' exonuclease activity
RJ36_RS16705	COG0419	ATPase involved in DNA repair
RJ36_RS16710	COG1940	carbohydrate kinase activity
RJ36_RS16715	COG2974	May be involved in recombination
RJ36_RS16725	COG4126	flavin adenine dinucleotide binding
RJ36_RS16735	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RJ36_RS16740	COG1671	Belongs to the UPF0178 family
RJ36_RS16745	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RJ36_RS16755	COG1785	Belongs to the alkaline phosphatase family
RJ36_RS16760	COG1609	Transcriptional regulator
RJ36_RS16770	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS16805	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
RJ36_RS16810	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RJ36_RS16815	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RJ36_RS16825	COG0113	porphobilinogen synthase activity
RJ36_RS16830	COG2175	clavaminate synthase activity
RJ36_RS16835	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RJ36_RS16840	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
RJ36_RS16845	COG4521	taurine ABC transporter
RJ36_RS16850	COG2040	homocysteine
RJ36_RS16855	COG0833	amino acid
RJ36_RS16860	COG2850	peptidyl-arginine hydroxylation
RJ36_RS16865	COG0667	Aldo Keto reductase
RJ36_RS16875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS16895	COG2274	protein secretion by the type I secretion system
RJ36_RS16930	COG3121	Chaperone
RJ36_RS16935	COG3188	usher protein
RJ36_RS16955	COG4772	TonB-dependent receptor
RJ36_RS16965	COG4256	Hemin uptake protein
RJ36_RS16975	COG3720	iron ion transport
RJ36_RS16980	COG4558	Periplasmic binding protein
RJ36_RS16985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RJ36_RS17000	COG5562	phage envelope protein
RJ36_RS17015	COG3414	Phosphotransferase system galactitol-specific IIB component
RJ36_RS17020	COG3775	system Galactitol-specific IIC component
RJ36_RS17025	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RJ36_RS17035	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RJ36_RS17050	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS17055	COG1393	Belongs to the ArsC family
RJ36_RS17070	COG3729	General stress protein
RJ36_RS17075	COG3685	Protein conserved in bacteria
RJ36_RS17080	COG1546	Belongs to the CinA family
RJ36_RS17085	COG2323	membrane
RJ36_RS17095	COG3111	PFAM Bacterial OB fold (BOF) protein
RJ36_RS17100	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RJ36_RS17155	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
RJ36_RS17165	COG3188	usher protein
RJ36_RS17205	COG0778	Nitroreductase
RJ36_RS17225	COG1882	Formate acetyltransferase
RJ36_RS17230	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RJ36_RS17255	COG2610	gluconate transmembrane transporter activity
RJ36_RS17260	COG1312	Catalyzes the dehydration of D-mannonate
RJ36_RS17275	COG3846	protein secretion by the type IV secretion system
RJ36_RS17290	COG3093	addiction module antidote protein HigA
RJ36_RS17295	COG0596	Alpha beta hydrolase
RJ36_RS17310	COG0583	DNA-binding transcription factor activity
RJ36_RS17335	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RJ36_RS17340	COG2801	Transposase and inactivated derivatives
RJ36_RS17370	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
RJ36_RS17380	COG1073	alpha beta
RJ36_RS17390	COG2195	Cleaves the N-terminal amino acid of tripeptides
RJ36_RS17395	COG0454	-acetyltransferase
RJ36_RS17405	COG2161	toxin-antitoxin pair type II binding
RJ36_RS17415	COG2991	Protein conserved in bacteria
RJ36_RS17425	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
RJ36_RS17430	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
RJ36_RS17435	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
RJ36_RS17450	COG3034	peptidoglycan biosynthetic process
RJ36_RS17455	COG0121	glutamine amidotransferase
RJ36_RS17475	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RJ36_RS17500	COG3501	Rhs element vgr protein
RJ36_RS17585	COG3157	Type VI secretion system effector, Hcp
RJ36_RS17605	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RJ36_RS17615	COG2226	methyltransferase
RJ36_RS17625	COG0741	lytic transglycosylase activity
RJ36_RS17625	COG1388	LysM domain
RJ36_RS17630	COG2226	methyltransferase
RJ36_RS17635	COG3021	interspecies interaction between organisms
RJ36_RS17640	COG2814	Major facilitator Superfamily
RJ36_RS17645	COG0583	DNA-binding transcription factor activity
RJ36_RS17685	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
RJ36_RS17695	COG2011	ABC-type metal ion transport system permease component
RJ36_RS17710	COG1720	tRNA m6t6A37 methyltransferase activity
RJ36_RS17720	COG3015	lipoprotein NlpE involved in copper resistance
RJ36_RS17725	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
RJ36_RS17730	COG4681	YaeQ
RJ36_RS17740	COG4568	rho-dependent transcription termination
RJ36_RS17750	COG0346	lactoylglutathione lyase activity
RJ36_RS17755	COG1982	Orn Lys Arg decarboxylase major
RJ36_RS17765	COG0587	DNA-directed DNA polymerase activity
RJ36_RS17795	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
RJ36_RS17800	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RJ36_RS17810	COG0575	Belongs to the CDS family
RJ36_RS17820	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
RJ36_RS17865	COG3835	regulator
RJ36_RS17870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RJ36_RS17885	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RJ36_RS17890	COG2860	membrane
RJ36_RS17920	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RJ36_RS17925	COG1120	ATPase activity
RJ36_RS17930	COG4774	siderophore transport
RJ36_RS17935	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RJ36_RS17940	COG1643	Atp-dependent helicase
RJ36_RS17945	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
RJ36_RS17950	COG1489	DNA binding
RJ36_RS17955	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
RJ36_RS17965	COG0617	tRNA 3'-terminal CCA addition
RJ36_RS17970	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RJ36_RS17985	COG5464	transposase or invertase
RJ36_RS17995	COG0726	polysaccharide deacetylase
RJ36_RS18000	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS18005	COG0842	Transport permease protein
RJ36_RS18010	COG1131	(ABC) transporter
RJ36_RS18015	COG0288	reversible hydration of carbon dioxide
RJ36_RS18020	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
RJ36_RS18025	COG4993	Dehydrogenase
RJ36_RS18055	COG2223	nitrite transmembrane transporter activity
RJ36_RS18065	COG1609	Transcriptional regulator
RJ36_RS18075	COG4221	oxidoreductase activity
RJ36_RS18080	COG1049	propionate catabolic process, 2-methylcitrate cycle
RJ36_RS18085	COG3064	Membrane
RJ36_RS18095	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RJ36_RS18100	COG0508	dehydrogenase complex catalyzes the overall conversion of
RJ36_RS18105	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
RJ36_RS18110	COG2186	Transcriptional regulator
RJ36_RS18115	COG1113	amino acid transport
RJ36_RS18120	COG2211	Major facilitator Superfamily
RJ36_RS18125	COG3940	Belongs to the glycosyl hydrolase 43 family
RJ36_RS18130	COG3725	Membrane protein required for beta-lactamase induction
RJ36_RS18145	COG4969	Belongs to the N-Me-Phe pilin family
RJ36_RS18150	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RJ36_RS18155	COG1459	type II secretion system
RJ36_RS18180	COG0494	nUDIX hydrolase
RJ36_RS18200	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RJ36_RS18205	COG0849	cell division
RJ36_RS18215	COG1181	Belongs to the D-alanine--D-alanine ligase family
RJ36_RS18230	COG0772	Belongs to the SEDS family
RJ36_RS18245	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RJ36_RS18250	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RJ36_RS18255	COG0768	penicillin binding
RJ36_RS18275	COG1609	Transcriptional regulator
RJ36_RS18285	COG0028	Belongs to the TPP enzyme family
RJ36_RS18300	COG0473	3-isopropylmalate dehydrogenase activity
RJ36_RS18315	COG2814	Major facilitator Superfamily
RJ36_RS18330	COG1178	ABC-type Fe3 transport system permease component
RJ36_RS18340	COG0586	Pfam SNARE associated Golgi protein
RJ36_RS18360	COG0235	Class ii aldolase
RJ36_RS18370	COG0417	DNA replication proofreading
RJ36_RS18380	COG0564	pseudouridine synthase activity
RJ36_RS18385	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
RJ36_RS18390	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
RJ36_RS18440	COG2271	Major facilitator Superfamily
RJ36_RS18445	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
RJ36_RS18450	COG0644	oxidoreductase
RJ36_RS18475	COG1804	L-carnitine dehydratase bile acid-inducible protein F
RJ36_RS18505	COG0505	Belongs to the CarA family
RJ36_RS18525	COG1047	Peptidyl-prolyl cis-trans
RJ36_RS18540	COG0196	riboflavin kinase activity
RJ36_RS18550	COG0583	DNA-binding transcription factor activity
RJ36_RS18575	COG4735	regulation of single-species biofilm formation
RJ36_RS18580	COG1584	GPR1 FUN34 yaaH family protein
RJ36_RS18595	COG0521	Mo-molybdopterin cofactor biosynthetic process
RJ36_RS18600	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RJ36_RS18605	COG1115	amino acid carrier protein
RJ36_RS18620	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
RJ36_RS18630	COG0527	aspartate kinase activity
RJ36_RS18630	COG0460	homoserine dehydrogenase
RJ36_RS18635	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RJ36_RS18640	COG0745	RESPONSE REGULATOR receiver
RJ36_RS18645	COG4452	Inner membrane protein CreD
RJ36_RS18650	COG2205	protein histidine kinase activity
RJ36_RS18655	COG0745	RESPONSE REGULATOR receiver
RJ36_RS18660	COG3045	CreA protein
RJ36_RS18665	COG3708	Transcriptional regulator
RJ36_RS18665	COG2207	Transcriptional regulator
RJ36_RS18685	COG0741	lytic transglycosylase activity
RJ36_RS18690	COG0488	(ABC) transporter
RJ36_RS18705	COG0560	Phosphoserine phosphatase
RJ36_RS18710	COG3726	membrane protein affecting hemolysin expression
RJ36_RS18720	COG1943	Transposase
RJ36_RS18735	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
RJ36_RS18745	COG1328	CTP reductase activity
RJ36_RS18750	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RJ36_RS18755	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
RJ36_RS18760	COG0084	hydrolase, TatD family'
RJ36_RS18765	COG2823	Periplasmic or secreted lipoprotein
RJ36_RS18775	COG1011	Hydrolase
RJ36_RS18785	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
RJ36_RS18815	COG3706	GGDEF domain
RJ36_RS18820	COG4114	ferric iron reductase
RJ36_RS18825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS18825	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RJ36_RS18830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RJ36_RS18835	COG2197	response regulator
RJ36_RS18840	COG2197	response regulator
RJ36_RS18850	COG2966	Psort location CytoplasmicMembrane, score
RJ36_RS18865	COG1484	DNA-dependent DNA replication
RJ36_RS18875	COG1368	sulfuric ester hydrolase activity
RJ36_RS18880	COG0840	transmembrane signaling receptor activity
RJ36_RS18905	COG1846	Transcriptional regulator
RJ36_RS18910	COG0179	Fumarylacetoacetate (FAA) hydrolase
RJ36_RS18915	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS18920	COG3384	dioxygenase
RJ36_RS18930	COG3971	2-oxopent-4-enoate hydratase activity
RJ36_RS18950	COG2368	4-hydroxyphenylacetate
RJ36_RS18955	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RJ36_RS18960	COG1966	Carbon starvation protein
RJ36_RS18965	COG2879	small protein
RJ36_RS18970	COG0523	cobalamin synthesis protein
RJ36_RS18985	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
RJ36_RS19005	COG1917	Cupin 2, conserved barrel domain protein
RJ36_RS19005	COG2207	Transcriptional regulator
RJ36_RS19010	COG1280	lysine exporter protein (LysE YggA)
RJ36_RS19015	COG1012	belongs to the aldehyde dehydrogenase family
RJ36_RS19020	COG5464	transposase or invertase
RJ36_RS19025	COG2733	membrane
RJ36_RS19030	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RJ36_RS19050	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS19060	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RJ36_RS19070	COG0180	Tryptophanyl-tRNA synthetase
RJ36_RS19100	COG3421	Type III restriction
RJ36_RS19105	COG2189	Belongs to the N(4) N(6)-methyltransferase family
RJ36_RS19115	COG0582	viral genome integration into host DNA
RJ36_RS19125	COG1064	alcohol dehydrogenase
RJ36_RS19135	COG0433	COG0433 Predicted ATPase
RJ36_RS19140	COG0795	lipopolysaccharide-transporting ATPase activity
RJ36_RS19145	COG0795	lipopolysaccharide-transporting ATPase activity
RJ36_RS19155	COG2927	DNA polymerase III (CHI subunit)
RJ36_RS19160	COG0525	valine-tRNA ligase activity
RJ36_RS19185	COG2731	YhcH YjgK YiaL family protein
RJ36_RS19190	COG3539	Fimbrial protein
RJ36_RS19200	COG3188	usher protein
RJ36_RS19205	COG3121	Chaperone
RJ36_RS19210	COG3539	Fimbrial protein
RJ36_RS19215	COG3539	Fimbrial protein
RJ36_RS19220	COG3539	Fimbrial protein
RJ36_RS19245	COG1132	(ABC) transporter
RJ36_RS19250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS19255	COG1136	(ABC) transporter
RJ36_RS19255	COG0577	efflux transmembrane transporter activity
RJ36_RS19260	COG1538	Outer membrane efflux protein
RJ36_RS19265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RJ36_RS19280	COG1028	Short-chain dehydrogenase reductase Sdr
RJ36_RS19315	COG0251	oxidation-reduction process
RJ36_RS19325	COG1609	Transcriptional regulator
RJ36_RS19330	COG1263	PTS System
RJ36_RS19330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RJ36_RS19335	COG0366	Alpha amylase catalytic
RJ36_RS19340	COG1328	CTP reductase activity
RJ36_RS19345	COG0602	queuosine metabolic process
RJ36_RS19360	COG0583	DNA-binding transcription factor activity
RJ36_RS19365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS19365	COG3711	transcriptional antiterminator
RJ36_RS19370	COG2706	6-phosphogluconolactonase activity
RJ36_RS19385	COG3964	amidohydrolase
RJ36_RS19425	COG0312	modulator of DNA gyrase
RJ36_RS19440	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RJ36_RS19450	COG1172	Belongs to the binding-protein-dependent transport system permease family
RJ36_RS19455	COG1172	Belongs to the binding-protein-dependent transport system permease family
RJ36_RS19460	COG1129	ABC transporter
RJ36_RS19465	COG1879	ABC-type sugar transport system periplasmic component
RJ36_RS19475	COG2337	Toxic component of a toxin-antitoxin (TA) module
RJ36_RS19480	COG2336	PFAM SpoVT AbrB
RJ36_RS19485	COG2105	PFAM AIG2 family protein
RJ36_RS19490	COG2911	Protein conserved in bacteria
RJ36_RS19495	COG0729	surface antigen
RJ36_RS19510	COG0673	inositol 2-dehydrogenase activity
RJ36_RS19525	COG1253	flavin adenine dinucleotide binding
RJ36_RS19535	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
RJ36_RS19550	COG1733	regulation of RNA biosynthetic process
RJ36_RS19555	COG0702	epimerase
RJ36_RS19560	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RJ36_RS19560	COG2169	Transcriptional regulator
RJ36_RS19565	COG0697	spore germination
RJ36_RS19575	COG1113	amino acid transport
RJ36_RS19580	COG0545	Peptidyl-prolyl cis-trans isomerase
RJ36_RS19585	COG3061	Opacity-associated protein A
RJ36_RS19595	COG0359	binds to the 23S rRNA
RJ36_RS19600	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
RJ36_RS19610	COG0360	Binds together with S18 to 16S ribosomal RNA
RJ36_RS19620	COG3477	response to acidic pH
RJ36_RS19625	COG0235	Class ii aldolase
RJ36_RS19645	COG3414	Phosphotransferase system galactitol-specific IIB component
RJ36_RS19650	COG3037	sugar-specific permease SgaT UlaA
RJ36_RS19665	COG1073	alpha beta
RJ36_RS19670	COG3650	response to hydrogen peroxide
RJ36_RS19680	COG1960	acyl-CoA dehydrogenase activity
RJ36_RS19685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RJ36_RS19690	COG0557	exoribonuclease II activity
RJ36_RS19705	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
RJ36_RS19710	COG0330	HflC and HflK could
RJ36_RS19715	COG0330	HflC and HflK could
RJ36_RS19720	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RJ36_RS19730	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RJ36_RS19740	COG0860	N-Acetylmuramoyl-L-alanine amidase
RJ36_RS19745	COG0802	atpase or kinase
RJ36_RS19750	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RJ36_RS19750	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RJ36_RS19755	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RJ36_RS19770	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
RJ36_RS19785	COG1511	domain protein
RJ36_RS19785	COG3264	Mechanosensitive ion channel
RJ36_RS19790	COG0531	amino acid
RJ36_RS19800	COG1053	succinate dehydrogenase
RJ36_RS19805	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
RJ36_RS19820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RJ36_RS19835	COG5510	response to toxic substance
RJ36_RS19850	COG1509	lysine 2,3-aminomutase activity
RJ36_RS19875	COG0531	amino acid
RJ36_RS19880	COG3030	protein affecting phage T7 exclusion by the F plasmid
RJ36_RS19885	COG1027	Aspartate ammonia-lyase
RJ36_RS19890	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
RJ36_RS19900	COG4232	protein-disulfide reductase activity
RJ36_RS19905	COG1309	transcriptional regulator
RJ36_RS19945	COG1538	Outer membrane efflux protein
RJ36_RS19955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RJ36_RS19970	COG5001	Diguanylate cyclase
RJ36_RS19970	COG3300	MHYT domain
RJ36_RS20000	COG0456	acetyltransferase
RJ36_RS20005	COG0318	PFAM AMP-dependent synthetase and ligase
RJ36_RS20015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RJ36_RS20020	COG0156	8-amino-7-oxononanoate synthase activity
RJ36_RS20025	COG0795	lipopolysaccharide-transporting ATPase activity
RJ36_RS20030	COG0795	lipopolysaccharide-transporting ATPase activity
RJ36_RS20035	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
RJ36_RS20045	COG2244	polysaccharide biosynthetic process
RJ36_RS20050	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RJ36_RS20055	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RJ36_RS20060	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RJ36_RS20065	COG0306	phosphate transporter
RJ36_RS20080	COG2824	Alkylphosphonate utilization operon protein PhnA
RJ36_RS20085	COG2764	glyoxalase bleomycin resistance protein dioxygenase
RJ36_RS20095	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
RJ36_RS20100	COG3639	organic phosphonate transmembrane transporter activity
RJ36_RS20105	COG2188	Transcriptional regulator
RJ36_RS20110	COG3624	Phosphonate C-P lyase system protein PhnG
RJ36_RS20115	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
RJ36_RS20120	COG3626	phosphonate metabolism
RJ36_RS20125	COG3627	carbon phosphorus lyase activity
RJ36_RS20130	COG4107	phosphonate C-P lyase system protein PhnK
RJ36_RS20135	COG4778	phosphonate C-P lyase system protein PhnL
RJ36_RS20140	COG3454	Phosphonate metabolism
RJ36_RS20145	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
RJ36_RS20150	COG0456	acetyltransferase
RJ36_RS20155	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RJ36_RS20165	COG2015	COG2015, Alkyl sulfatase and related hydrolases
RJ36_RS20175	COG1566	PFAM secretion protein HlyD family protein
RJ36_RS20180	COG1289	transmembrane transporter activity
RJ36_RS20190	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS20195	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS20200	COG1301	dicarboxylic acid transport
RJ36_RS20210	COG3162	membrane
RJ36_RS20225	COG0673	inositol 2-dehydrogenase activity
RJ36_RS20235	COG1346	cytolysis
RJ36_RS20240	COG1380	Effector of murein hydrolase LrgA
RJ36_RS20245	COG0583	DNA-binding transcription factor activity
RJ36_RS20250	COG0025	NhaP-type Na H and K H
RJ36_RS20255	COG1609	Transcriptional regulator
RJ36_RS20260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS20270	COG3037	sugar-specific permease SgaT UlaA
RJ36_RS20275	COG3959	Transketolase, thiamine diphosphate binding domain
RJ36_RS20280	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RJ36_RS20285	COG2252	PERMEase
RJ36_RS20295	COG0789	Transcriptional regulator
RJ36_RS20310	COG0629	single-stranded DNA binding
RJ36_RS20315	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
RJ36_RS20320	COG2315	Protein conserved in bacteria
RJ36_RS20325	COG3700	Belongs to the class B bacterial acid phosphatase family
RJ36_RS20330	COG1448	Aminotransferase
RJ36_RS20340	COG0305	Participates in initiation and elongation during chromosome replication
RJ36_RS20365	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RJ36_RS20375	COG0735	belongs to the Fur family
RJ36_RS20380	COG3237	CsbD-like
RJ36_RS20385	COG0534	Mate efflux family protein
RJ36_RS20395	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
RJ36_RS20410	COG3161	chorismate lyase activity
RJ36_RS20430	COG2182	Extracellular solute-binding protein
RJ36_RS20440	COG3833	ABC-type maltose transport systems, permease component
RJ36_RS20450	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RJ36_RS20480	COG0527	aspartate kinase activity
RJ36_RS20505	COG1187	pseudouridine synthase activity
RJ36_RS20545	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RJ36_RS20560	COG1410	methionine synthase
RJ36_RS20560	COG0646	methionine synthase
RJ36_RS20570	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
RJ36_RS20580	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
RJ36_RS20590	COG0456	acetyltransferase
RJ36_RS20620	COG0151	Belongs to the GarS family
RJ36_RS20670	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
RJ36_RS20675	COG2104	thiamine diphosphate biosynthetic process
RJ36_RS20690	COG3706	GGDEF domain
RJ36_RS20705	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
RJ36_RS20740	COG0250	Participates in transcription elongation, termination and antitermination
RJ36_RS20805	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
RJ36_RS20815	COG1739	Uncharacterized protein family UPF0029
RJ36_RS20855	COG0805	protein transport
RJ36_RS20870	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RJ36_RS20875	COG3165	ubiquinone biosynthetic process from chorismate
RJ36_RS20880	COG2226	methyltransferase
RJ36_RS20885	COG1322	Protein conserved in bacteria
RJ36_RS20910	COG0583	DNA-binding transcription factor activity
RJ36_RS20915	COG0697	spore germination
RJ36_RS20920	COG0561	phosphatase activity
RJ36_RS20925	COG2267	carboxylic ester hydrolase activity
RJ36_RS20930	COG1280	lysine exporter protein (LysE YggA)
RJ36_RS20940	COG1280	lysine exporter protein (LysE YggA)
RJ36_RS20950	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
RJ36_RS20970	COG0210	DNA helicase
RJ36_RS20975	COG1011	Hydrolase
RJ36_RS20985	COG3159	Protein conserved in bacteria
RJ36_RS21020	COG1587	Uroporphyrinogen-III synthase
RJ36_RS21025	COG2959	enzyme of heme biosynthesis
RJ36_RS21030	COG3071	HemY protein
RJ36_RS21035	COG3119	arylsulfatase activity
RJ36_RS21040	COG0641	radical SAM
RJ36_RS21085	COG2244	polysaccharide biosynthetic process
RJ36_RS21090	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RJ36_RS21095	COG0456	acetyltransferase
RJ36_RS21100	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
RJ36_RS21105	COG1088	dTDP-glucose 4,6-dehydratase activity
RJ36_RS21110	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
RJ36_RS21115	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
RJ36_RS21125	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RJ36_RS21130	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
RJ36_RS21135	COG3118	belongs to the thioredoxin family
RJ36_RS21145	COG0248	Ppx GppA phosphatase
RJ36_RS21155	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RJ36_RS21160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RJ36_RS21170	COG0583	DNA-binding transcription factor activity
RJ36_RS21175	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RJ36_RS21185	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RJ36_RS21190	COG3978	acetolactate synthase activity
RJ36_RS21200	COG0606	chelatase, subunit chli
RJ36_RS21205	COG3085	chromosome segregation
RJ36_RS21255	COG4206	TonB-dependent receptor
RJ36_RS21265	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RJ36_RS21285	COG0583	DNA-binding transcription factor activity
RJ36_RS21300	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
RJ36_RS21310	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
RJ36_RS21315	COG2194	sulfuric ester hydrolase activity
RJ36_RS21320	COG2207	Transcriptional regulator
RJ36_RS21325	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS21330	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS21335	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RJ36_RS21340	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS21340	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RJ36_RS21340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RJ36_RS21350	COG0371	Dehydrogenase
RJ36_RS21365	COG0583	DNA-binding transcription factor activity
RJ36_RS21375	COG0460	homoserine dehydrogenase
RJ36_RS21375	COG0527	aspartate kinase activity
RJ36_RS21380	COG0626	cystathionine gamma-synthase activity
RJ36_RS21390	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
RJ36_RS21400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
RJ36_RS21405	COG1609	Transcriptional regulator
RJ36_RS21410	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RJ36_RS21425	COG1575	Belongs to the MenA family. Type 1 subfamily
RJ36_RS21455	COG3678	ATP-independent chaperone mediated protein folding
RJ36_RS21460	COG0745	RESPONSE REGULATOR receiver
RJ36_RS21465	COG2205	protein histidine kinase activity
RJ36_RS21470	COG2258	MOSC domain
RJ36_RS21485	COG4977	sequence-specific DNA binding
RJ36_RS21485	COG1917	Cupin 2, conserved barrel domain protein
RJ36_RS21495	COG1070	Carbohydrate kinase
RJ36_RS21510	COG1454	alcohol dehydrogenase
RJ36_RS21545	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
RJ36_RS21545	COG3933	PFAM sigma-54 factor interaction domain-containing protein
RJ36_RS21555	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RJ36_RS21565	COG3715	PTS system
RJ36_RS21570	COG3716	PTS system mannose fructose sorbose family IID component
RJ36_RS21600	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS21600	COG0243	molybdopterin cofactor binding
RJ36_RS21605	COG3383	formate dehydrogenase (NAD+) activity
RJ36_RS21605	COG0243	molybdopterin cofactor binding
RJ36_RS21610	COG0437	4 iron, 4 sulfur cluster binding
RJ36_RS21615	COG2864	formate dehydrogenase
RJ36_RS21630	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RJ36_RS21650	COG4680	protein conserved in bacteria
RJ36_RS21660	COG0456	acetyltransferase
RJ36_RS21665	COG1490	D-aminoacyl-tRNA deacylase activity
RJ36_RS21670	COG1295	ribonuclease BN
RJ36_RS21675	COG1011	Hydrolase
RJ36_RS21680	COG2271	Major facilitator Superfamily
RJ36_RS21685	COG1082	Xylose isomerase domain protein TIM barrel
RJ36_RS21690	COG2188	Transcriptional regulator
RJ36_RS21700	COG0174	glutamine synthetase
RJ36_RS21705	COG3852	Histidine kinase
RJ36_RS21715	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RJ36_RS21730	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RJ36_RS21730	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RJ36_RS21735	COG0204	Acyl-transferase
RJ36_RS21740	COG5339	Protein conserved in bacteria
RJ36_RS21750	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
RJ36_RS21755	COG3084	Protein conserved in bacteria
RJ36_RS21765	COG1763	Mo-molybdopterin cofactor biosynthetic process
RJ36_RS21790	COG2186	Transcriptional regulator
RJ36_RS21795	COG0477	Major facilitator Superfamily
RJ36_RS21800	COG1609	Transcriptional regulator
RJ36_RS21805	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RJ36_RS21810	COG1879	ABC-type sugar transport system periplasmic component
RJ36_RS21815	COG1172	Belongs to the binding-protein-dependent transport system permease family
RJ36_RS21820	COG1129	ABC transporter
RJ36_RS21825	COG1869	D-ribose catabolic process
RJ36_RS21850	COG1522	sequence-specific DNA binding
RJ36_RS21855	COG0716	FMN binding
RJ36_RS21870	COG3312	ion transport
RJ36_RS21930	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RJ36_RS21935	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RJ36_RS21940	COG0573	inorganic phosphate transmembrane transporter activity
RJ36_RS21945	COG0581	inorganic phosphate transmembrane transporter activity
RJ36_RS21950	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RJ36_RS21955	COG0704	Plays a role in the regulation of phosphate uptake
RJ36_RS21960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RJ36_RS21965	COG2252	PERMEase
RJ36_RS21970	COG0431	NADPH-dependent FMN reductase
RJ36_RS21975	COG2091	lysine biosynthetic process via aminoadipic acid
RJ36_RS21990	COG0706	membrane insertase activity
RJ36_RS22030	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RJ36_RS22045	COG0739	heme binding
RJ36_RS22090	COG2207	Transcriptional regulator
RJ36_RS22090	COG3708	Transcriptional regulator
RJ36_RS22140	COG0110	maltose O-acetyltransferase activity