RJ36_RS00005 SM00382 ATPases associated with a variety of cellular activities RJ36_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RJ36_RS00010 SM00480 DNA polymerase III beta subunit RJ36_RS00020 SM00387 Histidine kinase-like ATPases RJ36_RS00020 SM00433 TopoisomeraseII RJ36_RS00075 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS00075 SM00866 RJ36_RS00075 RJ36_RS00090 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS00155 SM00858 RJ36_RS00155 RJ36_RS00160 SM01130 RJ36_RS00160 RJ36_RS00165 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS00350 SM00487 DEAD-like helicases superfamily RJ36_RS00350 SM00490 helicase superfamily c-terminal domain RJ36_RS00360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS00360 SM00954 Region found in RelA / SpoT proteins RJ36_RS00365 SM01409 RJ36_RS00365 RJ36_RS00370 SM00072 Guanylate kinase homologues. RJ36_RS00375 SM00532 Ligase N family RJ36_RS00435 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RJ36_RS00435 SM01232 RJ36_RS00435 RJ36_RS00515 SM00829 Enoylreductase RJ36_RS00540 SM00450 Rhodanese Homology Domain RJ36_RS00560 SM00971 Serine acetyltransferase, N-terminal RJ36_RS00575 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS00575 SM00895 RJ36_RS00575 RJ36_RS00685 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS00690 SM01007 Class II Aldolase and Adducin N-terminal domain RJ36_RS00700 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS00730 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS00745 SM00642 Alpha-amylase domain RJ36_RS00750 SM00047 Lysozyme subfamily 2 RJ36_RS00760 SM00849 Metallo-beta-lactamase superfamily RJ36_RS00765 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS00775 SM00382 ATPases associated with a variety of cellular activities RJ36_RS00820 SM00357 Cold shock protein domain RJ36_RS00825 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS00865 SM00354 helix_turn _helix lactose operon repressor RJ36_RS00925 SM00382 ATPases associated with a variety of cellular activities RJ36_RS00930 SM00382 ATPases associated with a variety of cellular activities RJ36_RS00980 SM00028 Tetratricopeptide repeats RJ36_RS00985 SM00052 Putative diguanylate phosphodiesterase RJ36_RS00985 SM00267 diguanylate cyclase RJ36_RS01010 SM00052 Putative diguanylate phosphodiesterase RJ36_RS01040 SM00421 helix_turn_helix, Lux Regulon RJ36_RS01120 SM00116 Domain in cystathionine beta-synthase and other proteins. RJ36_RS01130 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01215 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01215 SM00962 SRP54-type protein, GTPase domain RJ36_RS01215 SM00963 SRP54-type protein, helical bundle domain RJ36_RS01220 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01275 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01280 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01300 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01335 SM00354 helix_turn _helix lactose operon repressor RJ36_RS01355 SM00859 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS01360 SM00642 Alpha-amylase domain RJ36_RS01365 SM00642 Alpha-amylase domain RJ36_RS01400 SM00450 Rhodanese Homology Domain RJ36_RS01410 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS01410 SM01134 RJ36_RS01410 RJ36_RS01420 SM00421 helix_turn_helix, Lux Regulon RJ36_RS01475 SM00899 RJ36_RS01475 RJ36_RS01480 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS01480 SM00732 Likely ribonuclease with RNase H fold. RJ36_RS01490 SM00448 cheY-homologous receiver domain RJ36_RS01490 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS01495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS01495 SM00387 Histidine kinase-like ATPases RJ36_RS01495 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS01525 SM00363 S4 RNA-binding domain RJ36_RS01570 SM00965 Secretin and TonB N terminus short domain RJ36_RS01665 SM00100 Cyclic nucleotide-monophosphate binding domain RJ36_RS01665 SM00419 helix_turn_helix, cAMP Regulatory protein RJ36_RS01725 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RJ36_RS01735 SM00382 ATPases associated with a variety of cellular activities RJ36_RS01800 SM00838 Elongation factor G C-terminus RJ36_RS01800 SM00889 Elongation factor G, domain IV RJ36_RS01825 SM01403 RJ36_RS01825 RJ36_RS01845 SM01382 RJ36_RS01845 RJ36_RS01845 SM01383 RJ36_RS01845 RJ36_RS01860 SM00322 K homology RNA-binding domain RJ36_RS01880 SM01374 RJ36_RS01880 RJ36_RS01885 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RJ36_RS01945 SM00363 S4 RNA-binding domain RJ36_RS01945 SM01390 RJ36_RS01945 RJ36_RS01950 SM00662 RNA polymerases D RJ36_RS01965 SM00422 helix_turn_helix, mercury resistance RJ36_RS02065 SM00382 ATPases associated with a variety of cellular activities RJ36_RS02080 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS02135 SM00878 Biotin carboxylase C-terminal domain RJ36_RS02160 SM00829 Enoylreductase RJ36_RS02165 SM00052 Putative diguanylate phosphodiesterase RJ36_RS02165 SM00267 diguanylate cyclase RJ36_RS02190 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS02245 SM00869 Autotransporter beta-domain RJ36_RS02250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJ36_RS02255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJ36_RS02290 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS02290 SM00895 RJ36_RS02290 RJ36_RS02295 SM01130 RJ36_RS02295 RJ36_RS02330 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS02335 SM00073 Histidine Phosphotransfer domain RJ36_RS02335 SM00091 PAS domain RJ36_RS02335 SM00387 Histidine kinase-like ATPases RJ36_RS02335 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS02335 SM00448 cheY-homologous receiver domain RJ36_RS02380 SM00382 ATPases associated with a variety of cellular activities RJ36_RS02410 SM00382 ATPases associated with a variety of cellular activities RJ36_RS02490 SM01103 RJ36_RS02490 RJ36_RS02500 SM00382 ATPases associated with a variety of cellular activities RJ36_RS02610 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS02630 SM01387 RJ36_RS02630 RJ36_RS02635 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS02635 SM00322 K homology RNA-binding domain RJ36_RS02640 SM00028 Tetratricopeptide repeats RJ36_RS02645 SM00487 DEAD-like helicases superfamily RJ36_RS02645 SM00490 helicase superfamily c-terminal domain RJ36_RS02680 SM00465 GIY-YIG type nucleases (URI domain) RJ36_RS02700 SM00749 bacterial OsmY and nodulation domain RJ36_RS02745 SM00858 RJ36_RS02745 RJ36_RS02865 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS02865 SM00895 RJ36_RS02865 RJ36_RS02880 SM00858 RJ36_RS02880 RJ36_RS02930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RJ36_RS02930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS02945 SM00382 ATPases associated with a variety of cellular activities RJ36_RS02945 SM00930 RJ36_RS02945 RJ36_RS02980 SM00972 Spore Coat Protein U domain RJ36_RS02995 SM00972 Spore Coat Protein U domain RJ36_RS03020 SM00400 zinc finger RJ36_RS03020 SM00493 RJ36_RS03020 RJ36_RS03020 SM00766 DNA primase DnaG DnaB-binding RJ36_RS03035 SM01207 RJ36_RS03035 RJ36_RS03040 SM00905 Dihydroneopterin aldolase RJ36_RS03055 SM00287 Bacterial SH3 domain homologues RJ36_RS03060 SM01118 RJ36_RS03060 RJ36_RS03155 SM00387 Histidine kinase-like ATPases RJ36_RS03155 SM00433 TopoisomeraseII RJ36_RS03160 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS03195 SM00387 Histidine kinase-like ATPases RJ36_RS03195 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS03200 SM00448 cheY-homologous receiver domain RJ36_RS03200 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS03210 SM00871 Bacterial transcription activator, effector binding domain RJ36_RS03215 SM00434 DNA Topoisomerase IV RJ36_RS03220 SM00563 Phosphate acyltransferases RJ36_RS03245 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS03275 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS03305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS03355 SM00382 ATPases associated with a variety of cellular activities RJ36_RS03360 SM00382 ATPases associated with a variety of cellular activities RJ36_RS03430 SM00052 Putative diguanylate phosphodiesterase RJ36_RS03435 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS03455 SM00947 Carbonic anhydrase RJ36_RS03460 SM01116 RJ36_RS03460 RJ36_RS03505 SM00448 cheY-homologous receiver domain RJ36_RS03510 SM00387 Histidine kinase-like ATPases RJ36_RS03525 SM00764 Citrate lyase ligase C-terminal domain RJ36_RS03565 SM00478 endonuclease III RJ36_RS03565 SM00525 RJ36_RS03565 RJ36_RS03595 SM00870 RJ36_RS03595 RJ36_RS03600 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS03610 SM01152 RJ36_RS03610 RJ36_RS03625 SM00382 ATPases associated with a variety of cellular activities RJ36_RS03630 SM00421 helix_turn_helix, Lux Regulon RJ36_RS03635 SM00732 Likely ribonuclease with RNase H fold. RJ36_RS03660 SM00731 SprT homologues. RJ36_RS03710 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS03770 SM00861 Transketolase, pyrimidine binding domain RJ36_RS03780 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS03870 SM01011 Aminopeptidase P, N-terminal domain RJ36_RS03900 SM00822 RJ36_RS03900 RJ36_RS03915 SM01022 RJ36_RS03915 RJ36_RS03965 SM00937 RJ36_RS03965 RJ36_RS04000 SM00257 Lysin motif RJ36_RS04045 SM00825 Beta-ketoacyl synthase RJ36_RS04050 SM00822 RJ36_RS04050 RJ36_RS04060 SM00825 Beta-ketoacyl synthase RJ36_RS04180 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04215 SM00354 helix_turn _helix lactose operon repressor RJ36_RS04250 SM00354 helix_turn _helix lactose operon repressor RJ36_RS04255 SM00563 Phosphate acyltransferases RJ36_RS04280 SM00927 DNA mismatch repair enzyme MutH RJ36_RS04295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS04350 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04360 SM00646 RJ36_RS04360 RJ36_RS04375 SM00925 MltA specific insert domain RJ36_RS04415 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RJ36_RS04415 SM00475 5'-3' exonuclease RJ36_RS04465 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS04470 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS04480 SM00073 Histidine Phosphotransfer domain RJ36_RS04480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS04480 SM00387 Histidine kinase-like ATPases RJ36_RS04480 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS04480 SM00448 cheY-homologous receiver domain RJ36_RS04490 SM00954 Region found in RelA / SpoT proteins RJ36_RS04505 SM01192 RJ36_RS04505 RJ36_RS04505 SM01193 RJ36_RS04505 RJ36_RS04600 SM00257 Lysin motif RJ36_RS04610 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS04640 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RJ36_RS04640 SM00534 ATPase domain of DNA mismatch repair MUTS family RJ36_RS04660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS04660 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04755 SM00354 helix_turn _helix lactose operon repressor RJ36_RS04765 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS04780 SM00849 Metallo-beta-lactamase superfamily RJ36_RS04785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS04785 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04800 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04825 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04835 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RJ36_RS04900 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS04920 SM00382 ATPases associated with a variety of cellular activities RJ36_RS04950 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS04970 SM00528 Domain in histone-like proteins of HNS family RJ36_RS04980 SM00450 Rhodanese Homology Domain RJ36_RS05025 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS05075 SM00382 ATPases associated with a variety of cellular activities RJ36_RS05125 SM00052 Putative diguanylate phosphodiesterase RJ36_RS05125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS05125 SM00267 diguanylate cyclase RJ36_RS05130 SM01091 Transporter associated domain RJ36_RS05140 SM00382 ATPases associated with a variety of cellular activities RJ36_RS05140 SM00962 SRP54-type protein, GTPase domain RJ36_RS05140 SM00963 SRP54-type protein, helical bundle domain RJ36_RS05180 SM00267 diguanylate cyclase RJ36_RS05195 SM00830 Chorismate mutase type II RJ36_RS05205 SM00830 Chorismate mutase type II RJ36_RS05220 SM00363 S4 RNA-binding domain RJ36_RS05230 SM00382 ATPases associated with a variety of cellular activities RJ36_RS05230 SM01086 C-terminal, D2-small domain, of ClpB protein RJ36_RS05265 SM00155 Phospholipase D. Active site motifs. RJ36_RS05270 SM00881 CoA binding domain RJ36_RS05275 SM01144 RJ36_RS05275 RJ36_RS05285 SM00967 RNA 2'-O ribose methyltransferase substrate binding RJ36_RS05290 SM00986 Uracil DNA glycosylase superfamily RJ36_RS05290 SM00987 UreE urease accessory protein, C-terminal domain RJ36_RS05300 SM00487 DEAD-like helicases superfamily RJ36_RS05300 SM00490 helicase superfamily c-terminal domain RJ36_RS05345 SM00358 Double-stranded RNA binding motif RJ36_RS05345 SM00535 Ribonuclease III family RJ36_RS05390 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS05395 SM01211 RJ36_RS05395 RJ36_RS05400 SM00387 Histidine kinase-like ATPases RJ36_RS05400 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS05410 SM00382 ATPases associated with a variety of cellular activities RJ36_RS05410 SM00448 cheY-homologous receiver domain RJ36_RS05415 SM00938 Nitrogen regulatory protein P-II RJ36_RS05520 SM00271 DnaJ molecular chaperone homology domain RJ36_RS05550 SM00450 Rhodanese Homology Domain RJ36_RS05555 SM01359 RJ36_RS05555 RJ36_RS05555 SM01360 RJ36_RS05555 RJ36_RS05565 SM00562 RJ36_RS05565 RJ36_RS05575 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS05595 SM00564 beta-propeller repeat RJ36_RS05615 SM00116 Domain in cystathionine beta-synthase and other proteins. RJ36_RS05615 SM01240 RJ36_RS05615 RJ36_RS05625 SM00671 Sel1-like repeats. RJ36_RS05630 SM00487 DEAD-like helicases superfamily RJ36_RS05630 SM00490 helicase superfamily c-terminal domain RJ36_RS05635 SM00052 Putative diguanylate phosphodiesterase RJ36_RS05635 SM00267 diguanylate cyclase RJ36_RS05720 SM01130 RJ36_RS05720 RJ36_RS05785 SM00861 Transketolase, pyrimidine binding domain RJ36_RS05790 SM00919 Malic enzyme, NAD binding domain RJ36_RS05790 SM01274 RJ36_RS05790 RJ36_RS05795 SM00877 RJ36_RS05795 RJ36_RS05820 SM00877 RJ36_RS05820 RJ36_RS05865 SM00877 RJ36_RS05865 RJ36_RS05870 SM00877 RJ36_RS05870 RJ36_RS05875 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS05885 SM00646 RJ36_RS05885 RJ36_RS05910 SM00822 RJ36_RS05910 RJ36_RS05930 SM00382 ATPases associated with a variety of cellular activities RJ36_RS05950 SM00052 Putative diguanylate phosphodiesterase RJ36_RS05980 SM00771 ZipA, C-terminal domain (FtsZ-binding) RJ36_RS05985 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RJ36_RS05985 SM00292 breast cancer carboxy-terminal domain RJ36_RS05985 SM00532 Ligase N family RJ36_RS06070 SM00052 Putative diguanylate phosphodiesterase RJ36_RS06070 SM00267 diguanylate cyclase RJ36_RS06115 SM00448 cheY-homologous receiver domain RJ36_RS06115 SM00850 LytTr DNA-binding domain RJ36_RS06120 SM00387 Histidine kinase-like ATPases RJ36_RS06210 SM00448 cheY-homologous receiver domain RJ36_RS06210 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS06215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS06215 SM00387 Histidine kinase-like ATPases RJ36_RS06215 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS06285 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS06330 SM00903 Flavin reductase like domain RJ36_RS06350 SM00564 beta-propeller repeat RJ36_RS06365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS06365 SM00387 Histidine kinase-like ATPases RJ36_RS06365 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS06370 SM00448 cheY-homologous receiver domain RJ36_RS06415 SM00463 Small MutS-related domain RJ36_RS06460 SM00825 Beta-ketoacyl synthase RJ36_RS06475 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS06475 SM00866 RJ36_RS06475 RJ36_RS06495 SM00859 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS06580 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS06585 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS06600 SM00382 ATPases associated with a variety of cellular activities RJ36_RS06615 SM00905 Dihydroneopterin aldolase RJ36_RS06670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS06705 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RJ36_RS06710 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS06710 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RJ36_RS06785 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS06800 SM00852 Probable molybdopterin binding domain RJ36_RS06855 SM00869 Autotransporter beta-domain RJ36_RS06865 SM00434 DNA Topoisomerase IV RJ36_RS06870 SM00387 Histidine kinase-like ATPases RJ36_RS06870 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS06870 SM00448 cheY-homologous receiver domain RJ36_RS06875 SM00421 helix_turn_helix, Lux Regulon RJ36_RS06875 SM00448 cheY-homologous receiver domain RJ36_RS06880 SM00387 Histidine kinase-like ATPases RJ36_RS06895 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS06905 SM00382 ATPases associated with a variety of cellular activities RJ36_RS06910 SM00924 MgtE intracellular N domain RJ36_RS06930 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS06930 SM01134 RJ36_RS06930 RJ36_RS06940 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS06945 SM00895 RJ36_RS06945 RJ36_RS06975 SM00487 DEAD-like helicases superfamily RJ36_RS06975 SM00490 helicase superfamily c-terminal domain RJ36_RS06980 SM00363 S4 RNA-binding domain RJ36_RS06995 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07015 SM00052 Putative diguanylate phosphodiesterase RJ36_RS07025 SM00014 Acid phosphatase homologues RJ36_RS07030 SM00833 Cobalamin synthesis protein cobW C-terminal domain RJ36_RS07045 SM00841 Elongation factor P, C-terminal RJ36_RS07045 SM01185 RJ36_RS07045 RJ36_RS07070 SM00518 AP endonuclease family 2 RJ36_RS07115 SM00354 helix_turn _helix lactose operon repressor RJ36_RS07125 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07235 SM01217 RJ36_RS07235 RJ36_RS07295 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07305 SM00422 helix_turn_helix, mercury resistance RJ36_RS07310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS07315 SM00448 cheY-homologous receiver domain RJ36_RS07315 SM00850 LytTr DNA-binding domain RJ36_RS07345 SM00829 Enoylreductase RJ36_RS07355 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS07355 SM00866 RJ36_RS07355 RJ36_RS07425 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS07425 SM00866 RJ36_RS07425 RJ36_RS07445 SM01133 RJ36_RS07445 RJ36_RS07450 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS07470 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07475 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07480 SM00046 Diacylglycerol kinase catalytic domain (presumed) RJ36_RS07490 SM00448 cheY-homologous receiver domain RJ36_RS07490 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS07495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS07495 SM00387 Histidine kinase-like ATPases RJ36_RS07495 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS07525 SM00478 endonuclease III RJ36_RS07525 SM01009 AlkA N-terminal domain RJ36_RS07530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RJ36_RS07530 SM00091 PAS domain RJ36_RS07530 SM00267 diguanylate cyclase RJ36_RS07555 SM00271 DnaJ molecular chaperone homology domain RJ36_RS07560 SM01091 Transporter associated domain RJ36_RS07570 SM00226 Low molecular weight phosphatase family RJ36_RS07690 SM00858 RJ36_RS07690 RJ36_RS07725 SM01350 RJ36_RS07725 RJ36_RS07730 SM00984 UDP binding domain RJ36_RS07805 SM00479 RJ36_RS07805 RJ36_RS07810 SM00936 Penicillin-binding protein 5, C-terminal domain RJ36_RS07815 SM00871 Bacterial transcription activator, effector binding domain RJ36_RS07910 SM00382 ATPases associated with a variety of cellular activities RJ36_RS07955 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS08035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RJ36_RS08060 SM00900 RJ36_RS08060 RJ36_RS08070 SM00448 cheY-homologous receiver domain RJ36_RS08075 SM00387 Histidine kinase-like ATPases RJ36_RS08095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS08145 SM00421 helix_turn_helix, Lux Regulon RJ36_RS08195 SM00382 ATPases associated with a variety of cellular activities RJ36_RS08235 SM00642 Alpha-amylase domain RJ36_RS08270 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS08270 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJ36_RS08285 SM00382 ATPases associated with a variety of cellular activities RJ36_RS08290 SM00421 helix_turn_helix, Lux Regulon RJ36_RS08300 SM00421 helix_turn_helix, Lux Regulon RJ36_RS08300 SM00448 cheY-homologous receiver domain RJ36_RS08305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RJ36_RS08305 SM00465 GIY-YIG type nucleases (URI domain) RJ36_RS08400 SM00382 ATPases associated with a variety of cellular activities RJ36_RS08445 SM00073 Histidine Phosphotransfer domain RJ36_RS08445 SM00260 Two component signalling adaptor domain RJ36_RS08445 SM00387 Histidine kinase-like ATPases RJ36_RS08445 SM01231 RJ36_RS08445 RJ36_RS08450 SM00260 Two component signalling adaptor domain RJ36_RS08460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS08460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS08460 SM00319 Homologues of the ligand binding domain of Tar RJ36_RS08465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS08465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS08465 SM00319 Homologues of the ligand binding domain of Tar RJ36_RS08470 SM00138 Methyltransferase, chemotaxis proteins RJ36_RS08475 SM00448 cheY-homologous receiver domain RJ36_RS08480 SM00448 cheY-homologous receiver domain RJ36_RS08515 SM00836 DALR anticodon binding domain RJ36_RS08515 SM01016 Arginyl tRNA synthetase N terminal dom RJ36_RS08535 SM00953 RJ36_RS08535 RJ36_RS08600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RJ36_RS08605 SM00382 ATPases associated with a variety of cellular activities RJ36_RS08615 SM00382 ATPases associated with a variety of cellular activities RJ36_RS08625 SM00257 Lysin motif RJ36_RS08685 SM00479 RJ36_RS08685 RJ36_RS08755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS08760 SM00945 ProQ/FINO family RJ36_RS08765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJ36_RS08765 SM00245 tail specific protease RJ36_RS08780 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS08800 SM00357 Cold shock protein domain RJ36_RS08840 SM01091 Transporter associated domain RJ36_RS08845 SM00052 Putative diguanylate phosphodiesterase RJ36_RS08875 SM00487 DEAD-like helicases superfamily RJ36_RS08875 SM00491 RJ36_RS08875 RJ36_RS08895 SM00341 Helicase and RNase D C-terminal RJ36_RS08895 SM00474 3'-5' exonuclease RJ36_RS08945 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS08960 SM01005 Alanine racemase, C-terminal domain RJ36_RS08965 SM01091 Transporter associated domain RJ36_RS09005 SM00796 Allophanate hydrolase subunit 1 RJ36_RS09005 SM00797 Allophanate hydrolase subunit 2 RJ36_RS09005 SM00878 Biotin carboxylase C-terminal domain RJ36_RS09010 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS09010 SM00895 RJ36_RS09010 RJ36_RS09035 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09040 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09090 SM01400 RJ36_RS09090 RJ36_RS09110 SM00937 RJ36_RS09110 RJ36_RS09175 SM01012 RJ36_RS09175 RJ36_RS09190 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS09210 SM00421 helix_turn_helix, Lux Regulon RJ36_RS09210 SM00448 cheY-homologous receiver domain RJ36_RS09215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS09215 SM00387 Histidine kinase-like ATPases RJ36_RS09225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS09270 SM00448 cheY-homologous receiver domain RJ36_RS09280 SM00528 Domain in histone-like proteins of HNS family RJ36_RS09315 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09320 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09335 SM00155 Phospholipase D. Active site motifs. RJ36_RS09390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RJ36_RS09415 SM00873 B3/4 domain RJ36_RS09415 SM00874 tRNA synthetase B5 domain RJ36_RS09415 SM00896 Ferredoxin-fold anticodon binding domain RJ36_RS09420 SM00411 bacterial (prokaryotic) histone like domain RJ36_RS09435 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09470 SM01217 RJ36_RS09470 RJ36_RS09510 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09530 SM00257 Lysin motif RJ36_RS09575 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09590 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS09615 SM00859 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS09695 SM00257 Lysin motif RJ36_RS09705 SM00382 ATPases associated with a variety of cellular activities RJ36_RS09780 SM00354 helix_turn _helix lactose operon repressor RJ36_RS09810 SM00479 RJ36_RS09810 RJ36_RS09860 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS09865 SM00267 diguanylate cyclase RJ36_RS09890 SM00363 S4 RNA-binding domain RJ36_RS09905 SM00478 endonuclease III RJ36_RS09905 SM00525 RJ36_RS09905 RJ36_RS09915 SM00900 RJ36_RS09915 RJ36_RS09980 SM00354 helix_turn _helix lactose operon repressor RJ36_RS10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS10010 SM00387 Histidine kinase-like ATPases RJ36_RS10010 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS10015 SM00448 cheY-homologous receiver domain RJ36_RS10015 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS10040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RJ36_RS10040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RJ36_RS10070 SM00100 Cyclic nucleotide-monophosphate binding domain RJ36_RS10070 SM00419 helix_turn_helix, cAMP Regulatory protein RJ36_RS10080 SM00463 Small MutS-related domain RJ36_RS10085 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS10090 SM00882 Coenzyme A transferase RJ36_RS10095 SM00882 Coenzyme A transferase RJ36_RS10105 SM00998 Adenylosuccinate lyase C-terminus RJ36_RS10165 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS10170 SM00829 Enoylreductase RJ36_RS10175 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS10175 SM00895 RJ36_RS10175 RJ36_RS10235 SM00903 Flavin reductase like domain RJ36_RS10250 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS10275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10285 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS10290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS10330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10360 SM00829 Enoylreductase RJ36_RS10365 SM00382 ATPases associated with a variety of cellular activities RJ36_RS10370 SM00919 Malic enzyme, NAD binding domain RJ36_RS10370 SM01274 RJ36_RS10370 RJ36_RS10375 SM00829 Enoylreductase RJ36_RS10405 SM00267 diguanylate cyclase RJ36_RS10410 SM00465 GIY-YIG type nucleases (URI domain) RJ36_RS10415 SM00421 helix_turn_helix, Lux Regulon RJ36_RS10435 SM00052 Putative diguanylate phosphodiesterase RJ36_RS10435 SM01034 Sensors of blue-light using FAD RJ36_RS10440 SM00422 helix_turn_helix, mercury resistance RJ36_RS10455 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RJ36_RS10460 SM01092 CO dehydrogenase flavoprotein C-terminal domain RJ36_RS10470 SM00869 Autotransporter beta-domain RJ36_RS10475 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS10490 SM00642 Alpha-amylase domain RJ36_RS10495 SM00642 Alpha-amylase domain RJ36_RS10530 SM00257 Lysin motif RJ36_RS10530 SM00749 bacterial OsmY and nodulation domain RJ36_RS10540 SM00382 ATPases associated with a variety of cellular activities RJ36_RS10605 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS10605 SM01134 RJ36_RS10605 RJ36_RS10625 SM01130 RJ36_RS10625 RJ36_RS10665 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS10670 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS10690 SM00450 Rhodanese Homology Domain RJ36_RS10695 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS10715 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS10715 SM00895 RJ36_RS10715 RJ36_RS10745 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS10775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10780 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS10815 SM00116 Domain in cystathionine beta-synthase and other proteins. RJ36_RS10815 SM00382 ATPases associated with a variety of cellular activities RJ36_RS10910 SM00849 Metallo-beta-lactamase superfamily RJ36_RS10930 SM00849 Metallo-beta-lactamase superfamily RJ36_RS10985 SM00382 ATPases associated with a variety of cellular activities RJ36_RS10995 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS11055 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS11065 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS11105 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS11115 SM01150 RJ36_RS11115 RJ36_RS11135 SM00564 beta-propeller repeat RJ36_RS11140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS11140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS11140 SM00319 Homologues of the ligand binding domain of Tar RJ36_RS11145 SM00829 Enoylreductase RJ36_RS11170 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS11185 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11185 SM00487 DEAD-like helicases superfamily RJ36_RS11185 SM00490 helicase superfamily c-terminal domain RJ36_RS11185 SM00847 Helicase associated domain (HA2) Add an annotation RJ36_RS11280 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS11300 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS11300 SM01134 RJ36_RS11300 RJ36_RS11345 SM00642 Alpha-amylase domain RJ36_RS11365 SM00354 helix_turn _helix lactose operon repressor RJ36_RS11375 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11385 SM00890 Domain of unknown function RJ36_RS11405 SM00460 Transglutaminase/protease-like homologues RJ36_RS11465 SM00487 DEAD-like helicases superfamily RJ36_RS11465 SM00490 helicase superfamily c-terminal domain RJ36_RS11475 SM00052 Putative diguanylate phosphodiesterase RJ36_RS11475 SM00267 diguanylate cyclase RJ36_RS11510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RJ36_RS11520 SM00091 PAS domain RJ36_RS11520 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11555 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11565 SM00267 diguanylate cyclase RJ36_RS11600 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11605 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11620 SM00357 Cold shock protein domain RJ36_RS11620 SM00955 RJ36_RS11620 RJ36_RS11630 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS11630 SM01134 RJ36_RS11630 RJ36_RS11645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS11650 SM00028 Tetratricopeptide repeats RJ36_RS11660 SM00014 Acid phosphatase homologues RJ36_RS11670 SM00382 ATPases associated with a variety of cellular activities RJ36_RS11695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RJ36_RS11695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RJ36_RS11695 SM00493 RJ36_RS11695 RJ36_RS11715 SM00822 RJ36_RS11715 RJ36_RS11730 SM00363 S4 RNA-binding domain RJ36_RS11740 SM00481 DNA polymerase alpha chain like domain RJ36_RS11770 SM00267 diguanylate cyclase RJ36_RS11775 SM00267 diguanylate cyclase RJ36_RS11805 SM00857 Resolvase, N terminal domain RJ36_RS11835 SM00060 Fibronectin type 3 domain RJ36_RS11845 SM00849 Metallo-beta-lactamase superfamily RJ36_RS11855 SM00232 JAB/MPN domain RJ36_RS12020 SM00267 diguanylate cyclase RJ36_RS12020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS12080 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS12200 SM01060 RJ36_RS12200 RJ36_RS12215 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS12305 SM00382 ATPases associated with a variety of cellular activities RJ36_RS12310 SM00450 Rhodanese Homology Domain RJ36_RS12340 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RJ36_RS12350 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RJ36_RS12350 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RJ36_RS12350 SM00493 RJ36_RS12350 RJ36_RS12360 SM00014 Acid phosphatase homologues RJ36_RS12375 SM00870 RJ36_RS12375 RJ36_RS12410 SM00382 ATPases associated with a variety of cellular activities RJ36_RS12410 SM00930 RJ36_RS12410 RJ36_RS12430 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS12430 SM00382 ATPases associated with a variety of cellular activities RJ36_RS12445 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RJ36_RS12465 SM00763 PrkA AAA domain RJ36_RS12480 SM00267 diguanylate cyclase RJ36_RS12495 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS12525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RJ36_RS12525 SM00267 diguanylate cyclase RJ36_RS12535 SM00267 diguanylate cyclase RJ36_RS12580 SM01329 RJ36_RS12580 RJ36_RS12610 SM00052 Putative diguanylate phosphodiesterase RJ36_RS12615 SM00448 cheY-homologous receiver domain RJ36_RS12615 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS12620 SM00387 Histidine kinase-like ATPases RJ36_RS12625 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RJ36_RS12635 SM00382 ATPases associated with a variety of cellular activities RJ36_RS12655 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS12655 SM00866 RJ36_RS12655 RJ36_RS12665 SM01217 RJ36_RS12665 RJ36_RS12685 SM00382 ATPases associated with a variety of cellular activities RJ36_RS12700 SM00487 DEAD-like helicases superfamily RJ36_RS12700 SM00490 helicase superfamily c-terminal domain RJ36_RS12700 SM00982 RJ36_RS12700 RJ36_RS12700 SM01058 CarD-like/TRCF domain RJ36_RS12735 SM00825 Beta-ketoacyl synthase RJ36_RS12745 SM00822 RJ36_RS12745 RJ36_RS12750 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RJ36_RS12780 SM00363 S4 RNA-binding domain RJ36_RS12785 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS12810 SM00047 Lysozyme subfamily 2 RJ36_RS12855 SM00858 RJ36_RS12855 RJ36_RS12920 SM00450 Rhodanese Homology Domain RJ36_RS12960 SM00506 Appr-1"-p processing enzyme RJ36_RS12975 SM00421 helix_turn_helix, Lux Regulon RJ36_RS13010 SM00481 DNA polymerase alpha chain like domain RJ36_RS13170 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13175 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS13175 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJ36_RS13180 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13215 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13225 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS13250 SM00972 Spore Coat Protein U domain RJ36_RS13255 SM00972 Spore Coat Protein U domain RJ36_RS13265 SM00796 Allophanate hydrolase subunit 1 RJ36_RS13265 SM00797 Allophanate hydrolase subunit 2 RJ36_RS13265 SM00878 Biotin carboxylase C-terminal domain RJ36_RS13280 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13305 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13315 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS13345 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS13355 SM01230 RJ36_RS13355 RJ36_RS13415 SM00869 Autotransporter beta-domain RJ36_RS13460 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS13460 SM00895 RJ36_RS13460 RJ36_RS13495 SM00095 Transthyretin RJ36_RS13500 SM00849 Metallo-beta-lactamase superfamily RJ36_RS13515 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS13605 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RJ36_RS13670 SM00992 Hemimethylated DNA-binding protein YccV like RJ36_RS13685 SM00881 CoA binding domain RJ36_RS13690 SM00851 MGS-like domain RJ36_RS13755 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13760 SM00981 RJ36_RS13760 RJ36_RS13845 SM00849 Metallo-beta-lactamase superfamily RJ36_RS13910 SM00382 ATPases associated with a variety of cellular activities RJ36_RS13915 SM00849 Metallo-beta-lactamase superfamily RJ36_RS13920 SM00411 bacterial (prokaryotic) histone like domain RJ36_RS13925 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS14000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS14010 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14020 SM00843 RJ36_RS14020 RJ36_RS14025 SM00344 helix_turn_helix ASNC type RJ36_RS14035 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14040 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14050 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS14055 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14055 SM01086 C-terminal, D2-small domain, of ClpB protein RJ36_RS14065 SM00357 Cold shock protein domain RJ36_RS14070 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14130 SM00644 RJ36_RS14130 RJ36_RS14145 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14150 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS14150 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJ36_RS14165 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS14170 SM00387 Histidine kinase-like ATPases RJ36_RS14170 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS14175 SM00448 cheY-homologous receiver domain RJ36_RS14175 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS14200 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14265 SM00014 Acid phosphatase homologues RJ36_RS14270 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS14270 SM01134 RJ36_RS14270 RJ36_RS14285 SM00936 Penicillin-binding protein 5, C-terminal domain RJ36_RS14295 SM00354 helix_turn _helix lactose operon repressor RJ36_RS14320 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS14355 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14365 SM00852 Probable molybdopterin binding domain RJ36_RS14405 SM00354 helix_turn _helix lactose operon repressor RJ36_RS14425 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14435 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS14435 SM00866 RJ36_RS14435 RJ36_RS14450 SM00529 Helix-turn-helix diphteria tox regulatory element RJ36_RS14480 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS14480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJ36_RS14490 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14505 SM00903 Flavin reductase like domain RJ36_RS14540 SM00855 Phosphoglycerate mutase family RJ36_RS14550 SM01061 CAT RNA binding domain RJ36_RS14590 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RJ36_RS14610 SM00257 Lysin motif RJ36_RS14640 SM00487 DEAD-like helicases superfamily RJ36_RS14640 SM00488 RJ36_RS14640 RJ36_RS14640 SM00491 RJ36_RS14640 RJ36_RS14645 SM00487 DEAD-like helicases superfamily RJ36_RS14645 SM00490 helicase superfamily c-terminal domain RJ36_RS14660 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14685 SM00155 Phospholipase D. Active site motifs. RJ36_RS14730 SM00852 Probable molybdopterin binding domain RJ36_RS14735 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS14750 SM00448 cheY-homologous receiver domain RJ36_RS14750 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS14755 SM00387 Histidine kinase-like ATPases RJ36_RS14755 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS14760 SM00487 DEAD-like helicases superfamily RJ36_RS14760 SM00490 helicase superfamily c-terminal domain RJ36_RS14765 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14785 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS14785 SM00876 Biotin and Thiamin Synthesis associated domain RJ36_RS14825 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14850 SM00382 ATPases associated with a variety of cellular activities RJ36_RS14880 SM00855 Phosphoglycerate mutase family RJ36_RS14885 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15015 SM00872 Alpha mannosidase, middle domain RJ36_RS15025 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS15025 SM00866 RJ36_RS15025 RJ36_RS15030 SM00028 Tetratricopeptide repeats RJ36_RS15035 SM00881 CoA binding domain RJ36_RS15050 SM00861 Transketolase, pyrimidine binding domain RJ36_RS15090 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RJ36_RS15090 SM01232 RJ36_RS15090 RJ36_RS15115 SM00797 Allophanate hydrolase subunit 2 RJ36_RS15120 SM00796 Allophanate hydrolase subunit 1 RJ36_RS15170 SM00387 Histidine kinase-like ATPases RJ36_RS15170 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS15175 SM00448 cheY-homologous receiver domain RJ36_RS15175 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS15330 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS15345 SM00116 Domain in cystathionine beta-synthase and other proteins. RJ36_RS15345 SM01091 Transporter associated domain RJ36_RS15355 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS15370 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15410 SM00855 Phosphoglycerate mutase family RJ36_RS15440 SM00936 Penicillin-binding protein 5, C-terminal domain RJ36_RS15460 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS15480 SM00357 Cold shock protein domain RJ36_RS15565 SM00470 ParB-like nuclease domain RJ36_RS15585 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS15645 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15660 SM00823 Phosphopantetheine attachment site RJ36_RS15660 SM00824 Thioesterase RJ36_RS15665 SM00923 MbtH-like protein RJ36_RS15705 SM00831 Cation transporter/ATPase, N-terminus RJ36_RS15720 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS15725 SM00849 Metallo-beta-lactamase superfamily RJ36_RS15755 SM00354 helix_turn _helix lactose operon repressor RJ36_RS15795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS15815 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15820 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15830 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS15830 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RJ36_RS15835 SM00822 RJ36_RS15835 RJ36_RS15840 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS15870 SM01131 RJ36_RS15870 RJ36_RS15885 SM00421 helix_turn_helix, Lux Regulon RJ36_RS15885 SM00448 cheY-homologous receiver domain RJ36_RS15930 SM01324 RJ36_RS15930 RJ36_RS15935 SM00869 Autotransporter beta-domain RJ36_RS15945 SM00354 helix_turn _helix lactose operon repressor RJ36_RS15955 SM00840 RJ36_RS15955 RJ36_RS15970 SM01001 AIR carboxylase RJ36_RS15980 SM00450 Rhodanese Homology Domain RJ36_RS15990 SM00382 ATPases associated with a variety of cellular activities RJ36_RS15990 SM00930 RJ36_RS15990 RJ36_RS16010 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16020 SM00822 RJ36_RS16020 RJ36_RS16035 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16060 SM00244 prohibitin homologues RJ36_RS16070 SM00422 helix_turn_helix, mercury resistance RJ36_RS16075 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS16140 SM00387 Histidine kinase-like ATPases RJ36_RS16145 SM00493 RJ36_RS16145 RJ36_RS16155 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16210 SM01266 RJ36_RS16210 RJ36_RS16220 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS16250 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16260 SM00052 Putative diguanylate phosphodiesterase RJ36_RS16265 SM00903 Flavin reductase like domain RJ36_RS16280 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS16315 SM00938 Nitrogen regulatory protein P-II RJ36_RS16320 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16325 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16330 SM00344 helix_turn_helix ASNC type RJ36_RS16360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RJ36_RS16370 SM00411 bacterial (prokaryotic) histone like domain RJ36_RS16375 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16375 SM00464 Found in ATP-dependent protease La (LON) RJ36_RS16380 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16380 SM00994 ClpX C4-type zinc finger RJ36_RS16380 SM01086 C-terminal, D2-small domain, of ClpB protein RJ36_RS16445 SM00671 Sel1-like repeats. RJ36_RS16450 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS16530 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS16530 SM00866 RJ36_RS16530 RJ36_RS16535 SM00981 RJ36_RS16535 RJ36_RS16550 SM00861 Transketolase, pyrimidine binding domain RJ36_RS16600 SM00507 HNH nucleases RJ36_RS16620 SM01323 RJ36_RS16620 RJ36_RS16675 SM00642 Alpha-amylase domain RJ36_RS16690 SM00091 PAS domain RJ36_RS16690 SM00387 Histidine kinase-like ATPases RJ36_RS16690 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS16695 SM00448 cheY-homologous receiver domain RJ36_RS16695 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS16755 SM00098 Alkaline phosphatase homologues RJ36_RS16760 SM00354 helix_turn _helix lactose operon repressor RJ36_RS16820 SM00869 Autotransporter beta-domain RJ36_RS16825 SM01004 Delta-aminolevulinic acid dehydratase RJ36_RS16840 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16845 SM00062 Bacterial periplasmic substrate-binding proteins RJ36_RS16860 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RJ36_RS16895 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16945 SM00052 Putative diguanylate phosphodiesterase RJ36_RS16990 SM00382 ATPases associated with a variety of cellular activities RJ36_RS16995 SM00869 Autotransporter beta-domain RJ36_RS17065 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RJ36_RS17150 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS17155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS17180 SM00419 helix_turn_helix, cAMP Regulatory protein RJ36_RS17235 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS17325 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS17330 SM00873 B3/4 domain RJ36_RS17335 SM01130 RJ36_RS17335 RJ36_RS17345 SM00267 diguanylate cyclase RJ36_RS17365 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RJ36_RS17435 SM00900 RJ36_RS17435 RJ36_RS17555 SM00382 ATPases associated with a variety of cellular activities RJ36_RS17555 SM01086 C-terminal, D2-small domain, of ClpB protein RJ36_RS17605 SM00479 RJ36_RS17605 RJ36_RS17620 SM00849 Metallo-beta-lactamase superfamily RJ36_RS17625 SM00257 Lysin motif RJ36_RS17690 SM00382 ATPases associated with a variety of cellular activities RJ36_RS17690 SM00930 RJ36_RS17690 RJ36_RS17730 SM01322 RJ36_RS17730 RJ36_RS17745 SM00977 TilS substrate C-terminal domain RJ36_RS17765 SM00481 DNA polymerase alpha chain like domain RJ36_RS17795 SM00935 Outer membrane protein (OmpH-like) RJ36_RS17805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJ36_RS17850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS17870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RJ36_RS17875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS17925 SM00382 ATPases associated with a variety of cellular activities RJ36_RS17940 SM00487 DEAD-like helicases superfamily RJ36_RS17940 SM00490 helicase superfamily c-terminal domain RJ36_RS17940 SM00847 Helicase associated domain (HA2) Add an annotation RJ36_RS18010 SM00382 ATPases associated with a variety of cellular activities RJ36_RS18015 SM00947 Carbonic anhydrase RJ36_RS18025 SM00564 beta-propeller repeat RJ36_RS18060 SM01038 Beta galactosidase small chain RJ36_RS18065 SM00354 helix_turn _helix lactose operon repressor RJ36_RS18110 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS18110 SM00895 RJ36_RS18110 RJ36_RS18135 SM00644 RJ36_RS18135 RJ36_RS18160 SM01240 RJ36_RS18160 RJ36_RS18185 SM00957 SecA DEAD-like domain RJ36_RS18185 SM00958 SecA preprotein cross-linking domain RJ36_RS18200 SM00864 Tubulin/FtsZ family, GTPase domain RJ36_RS18200 SM00865 Tubulin/FtsZ family, C-terminal domain RJ36_RS18205 SM00842 Cell division protein FtsA RJ36_RS18275 SM00354 helix_turn _helix lactose operon repressor RJ36_RS18295 SM00917 LeuA allosteric (dimerisation) domain RJ36_RS18300 SM01329 RJ36_RS18300 RJ36_RS18335 SM00382 ATPases associated with a variety of cellular activities RJ36_RS18345 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS18360 SM01007 Class II Aldolase and Adducin N-terminal domain RJ36_RS18370 SM00486 DNA polymerase type-B family RJ36_RS18375 SM00487 DEAD-like helicases superfamily RJ36_RS18375 SM00490 helicase superfamily c-terminal domain RJ36_RS18385 SM00271 DnaJ molecular chaperone homology domain RJ36_RS18405 SM00650 Ribosomal RNA adenine dimethylases RJ36_RS18455 SM00893 Electron transfer flavoprotein domain RJ36_RS18460 SM00893 Electron transfer flavoprotein domain RJ36_RS18500 SM00851 MGS-like domain RJ36_RS18500 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RJ36_RS18505 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RJ36_RS18540 SM00904 Riboflavin kinase RJ36_RS18560 SM00271 DnaJ molecular chaperone homology domain RJ36_RS18595 SM00852 Probable molybdopterin binding domain RJ36_RS18640 SM00448 cheY-homologous receiver domain RJ36_RS18640 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS18650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS18650 SM00387 Histidine kinase-like ATPases RJ36_RS18650 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS18655 SM00448 cheY-homologous receiver domain RJ36_RS18655 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS18665 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS18665 SM00871 Bacterial transcription activator, effector binding domain RJ36_RS18670 SM00855 Phosphoglycerate mutase family RJ36_RS18690 SM00382 ATPases associated with a variety of cellular activities RJ36_RS18695 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS18700 SM00382 ATPases associated with a variety of cellular activities RJ36_RS18720 SM01321 RJ36_RS18720 RJ36_RS18735 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RJ36_RS18740 SM01133 RJ36_RS18740 RJ36_RS18765 SM00749 bacterial OsmY and nodulation domain RJ36_RS18815 SM00267 diguanylate cyclase RJ36_RS18835 SM00421 helix_turn_helix, Lux Regulon RJ36_RS18840 SM00421 helix_turn_helix, Lux Regulon RJ36_RS18865 SM00382 ATPases associated with a variety of cellular activities RJ36_RS18880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RJ36_RS18880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS18880 SM00319 Homologues of the ligand binding domain of Tar RJ36_RS18890 SM00421 helix_turn_helix, Lux Regulon RJ36_RS18895 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS18905 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS18945 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS18955 SM00903 Flavin reductase like domain RJ36_RS18970 SM00833 Cobalamin synthesis protein cobW C-terminal domain RJ36_RS18995 SM00487 DEAD-like helicases superfamily RJ36_RS19005 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS19055 SM00347 helix_turn_helix multiple antibiotic resistance protein RJ36_RS19060 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS19100 SM00487 DEAD-like helicases superfamily RJ36_RS19125 SM00829 Enoylreductase RJ36_RS19245 SM00382 ATPases associated with a variety of cellular activities RJ36_RS19255 SM00382 ATPases associated with a variety of cellular activities RJ36_RS19265 SM00825 Beta-ketoacyl synthase RJ36_RS19280 SM00822 RJ36_RS19280 RJ36_RS19285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RJ36_RS19295 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS19320 SM00831 Cation transporter/ATPase, N-terminus RJ36_RS19325 SM00354 helix_turn _helix lactose operon repressor RJ36_RS19335 SM00642 Alpha-amylase domain RJ36_RS19460 SM00382 ATPases associated with a variety of cellular activities RJ36_RS19480 SM00966 SpoVT / AbrB like domain RJ36_RS19505 SM00354 helix_turn _helix lactose operon repressor RJ36_RS19525 SM01091 Transporter associated domain RJ36_RS19560 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS19625 SM01007 Class II Aldolase and Adducin N-terminal domain RJ36_RS19635 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RJ36_RS19660 SM00420 helix_turn_helix, Deoxyribose operon repressor RJ36_RS19660 SM01134 RJ36_RS19660 RJ36_RS19685 SM00967 RNA 2'-O ribose methyltransferase substrate binding RJ36_RS19690 SM00316 Ribosomal protein S1-like RNA-binding domain RJ36_RS19690 SM00357 Cold shock protein domain RJ36_RS19690 SM00955 RJ36_RS19690 RJ36_RS19700 SM00788 Adenylosuccinate synthetase RJ36_RS19710 SM00244 prohibitin homologues RJ36_RS19715 SM00244 prohibitin homologues RJ36_RS19735 SM00853 MutL C terminal dimerisation domain RJ36_RS19735 SM01340 RJ36_RS19735 RJ36_RS19740 SM00646 RJ36_RS19740 RJ36_RS19770 SM00479 RJ36_RS19770 RJ36_RS19845 SM00841 Elongation factor P, C-terminal RJ36_RS19845 SM01185 RJ36_RS19845 RJ36_RS19870 SM00883 Chaperonin 10 Kd subunit RJ36_RS19940 SM00327 von Willebrand factor (vWF) type A domain RJ36_RS19950 SM00382 ATPases associated with a variety of cellular activities RJ36_RS19970 SM00052 Putative diguanylate phosphodiesterase RJ36_RS19970 SM00267 diguanylate cyclase RJ36_RS19990 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20090 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20105 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS20105 SM00866 RJ36_RS20105 RJ36_RS20130 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20135 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20145 SM00072 Guanylate kinase homologues. RJ36_RS20165 SM00849 Metallo-beta-lactamase superfamily RJ36_RS20190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS20255 SM00354 helix_turn _helix lactose operon repressor RJ36_RS20280 SM00861 Transketolase, pyrimidine binding domain RJ36_RS20295 SM00422 helix_turn_helix, mercury resistance RJ36_RS20300 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS20335 SM01005 Alanine racemase, C-terminal domain RJ36_RS20340 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20355 SM00829 Enoylreductase RJ36_RS20400 SM00563 Phosphate acyltransferases RJ36_RS20425 SM00382 ATPases associated with a variety of cellular activities RJ36_RS20505 SM00363 S4 RNA-binding domain RJ36_RS20515 SM00822 RJ36_RS20515 RJ36_RS20560 SM01018 B12 binding domain RJ36_RS20565 SM00346 helix_turn_helix isocitrate lyase regulation RJ36_RS20615 SM00798 AICARFT/IMPCHase bienzyme RJ36_RS20615 SM00851 MGS-like domain RJ36_RS20620 SM01209 RJ36_RS20620 RJ36_RS20620 SM01210 RJ36_RS20620 RJ36_RS20630 SM00411 bacterial (prokaryotic) histone like domain RJ36_RS20685 SM00876 Biotin and Thiamin Synthesis associated domain RJ36_RS20690 SM00267 diguanylate cyclase RJ36_RS20710 SM00663 RNA polymerase I subunit A N-terminus RJ36_RS20735 SM00649 Ribosomal protein L11/L12 RJ36_RS20740 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RJ36_RS20740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RJ36_RS20845 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RJ36_RS20945 SM00341 Helicase and RNase D C-terminal RJ36_RS20945 SM00487 DEAD-like helicases superfamily RJ36_RS20945 SM00490 helicase superfamily c-terminal domain RJ36_RS20945 SM00956 RJ36_RS20945 RJ36_RS21000 SM01219 RJ36_RS21000 RJ36_RS21110 SM00984 UDP binding domain RJ36_RS21130 SM00357 Cold shock protein domain RJ36_RS21130 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21130 SM00959 Rho termination factor, N-terminal domain RJ36_RS21140 SM00487 DEAD-like helicases superfamily RJ36_RS21140 SM00490 helicase superfamily c-terminal domain RJ36_RS21200 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21300 SM00859 Semialdehyde dehydrogenase, NAD binding domain RJ36_RS21320 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS21400 SM00487 DEAD-like helicases superfamily RJ36_RS21400 SM00490 helicase superfamily c-terminal domain RJ36_RS21405 SM00354 helix_turn _helix lactose operon repressor RJ36_RS21420 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21420 SM01086 C-terminal, D2-small domain, of ClpB protein RJ36_RS21460 SM00448 cheY-homologous receiver domain RJ36_RS21460 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS21465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RJ36_RS21465 SM00387 Histidine kinase-like ATPases RJ36_RS21465 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS21485 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS21490 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS21505 SM01007 Class II Aldolase and Adducin N-terminal domain RJ36_RS21525 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS21545 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RJ36_RS21635 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS21655 SM00530 Helix-turn-helix XRE-family like proteins RJ36_RS21690 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS21690 SM00866 RJ36_RS21690 RJ36_RS21700 SM01230 RJ36_RS21700 RJ36_RS21705 SM00091 PAS domain RJ36_RS21705 SM00387 Histidine kinase-like ATPases RJ36_RS21705 SM00388 His Kinase A (phosphoacceptor) domain RJ36_RS21710 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21710 SM00448 cheY-homologous receiver domain RJ36_RS21715 SM00729 Elongator protein 3, MiaB family, Radical SAM RJ36_RS21730 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RJ36_RS21730 SM00474 3'-5' exonuclease RJ36_RS21730 SM00475 5'-3' exonuclease RJ36_RS21730 SM00482 DNA polymerase A domain RJ36_RS21735 SM00563 Phosphate acyltransferases RJ36_RS21790 SM00345 helix_turn_helix gluconate operon transcriptional repressor RJ36_RS21790 SM00895 RJ36_RS21790 RJ36_RS21800 SM00354 helix_turn _helix lactose operon repressor RJ36_RS21820 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21835 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21840 SM00327 von Willebrand factor (vWF) type A domain RJ36_RS21850 SM00344 helix_turn_helix ASNC type RJ36_RS21860 SM01228 RJ36_RS21860 RJ36_RS21905 SM00382 ATPases associated with a variety of cellular activities RJ36_RS21920 SM00710 Parallel beta-helix repeats RJ36_RS21950 SM00382 ATPases associated with a variety of cellular activities RJ36_RS22065 SM00862 Transcriptional regulatory protein, C terminal RJ36_RS22090 SM00342 helix_turn_helix, arabinose operon control protein RJ36_RS22095 SM00869 Autotransporter beta-domain RJ36_RS22135 SM00671 Sel1-like repeats. RJ36_RS22140 SM01266 RJ36_RS22140