locus-tag	class	description
CNQ40_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CNQ40_RS00010	COG0592	DNA-directed DNA polymerase activity
CNQ40_RS00015	COG2501	S4 domain
CNQ40_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CNQ40_RS00025	COG0187	DNA topoisomerase II activity
CNQ40_RS00035	COG0360	Binds together with S18 to 16S ribosomal RNA
CNQ40_RS00040	COG0629	single-stranded DNA binding
CNQ40_RS00045	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CNQ40_RS00055	COG0359	binds to the 23S rRNA
CNQ40_RS00060	COG1263	PTS System
CNQ40_RS00060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS00060	COG2190	(PTS) system
CNQ40_RS00065	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS00070	COG3711	transcriptional antiterminator
CNQ40_RS00090	COG0305	Participates in initiation and elongation during chromosome replication
CNQ40_RS00095	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CNQ40_RS00110	COG0488	(ABC) transporter
CNQ40_RS00120	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CNQ40_RS00120	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CNQ40_RS00125	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS00125	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS00135	COG3715	PTS system
CNQ40_RS00140	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS00165	COG1737	Transcriptional regulator
CNQ40_RS00170	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS00170	COG1263	PTS System
CNQ40_RS00175	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CNQ40_RS00180	COG0251	oxidation-reduction process
CNQ40_RS00185	COG0392	lysyltransferase activity
CNQ40_RS00185	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CNQ40_RS00215	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CNQ40_RS00220	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CNQ40_RS00225	COG0756	dUTP diphosphatase activity
CNQ40_RS00235	COG4956	integral membrane protein (PIN domain superfamily)
CNQ40_RS00240	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CNQ40_RS00245	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CNQ40_RS00255	COG1045	serine acetyltransferase
CNQ40_RS00260	COG0215	cysteine-tRNA ligase activity
CNQ40_RS00265	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CNQ40_RS00270	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CNQ40_RS00275	COG3688	RNA-binding protein containing a PIN domain
CNQ40_RS00285	COG4466	Protein conserved in bacteria
CNQ40_RS00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CNQ40_RS00295	COG3443	Belongs to the bacterial solute-binding protein 9 family
CNQ40_RS00295	COG0803	Belongs to the bacterial solute-binding protein 9 family
CNQ40_RS00300	COG1121	(ABC) transporter
CNQ40_RS00305	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ40_RS00310	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CNQ40_RS00315	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CNQ40_RS00330	COG0737	Belongs to the 5'-nucleotidase family
CNQ40_RS00335	COG4166	transmembrane transport
CNQ40_RS00340	COG4224	UPF0291 protein
CNQ40_RS00345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CNQ40_RS00355	COG0632	four-way junction helicase activity
CNQ40_RS00360	COG2255	four-way junction helicase activity
CNQ40_RS00370	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CNQ40_RS00385	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ40_RS00390	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS00415	COG2261	transglycosylase associated protein
CNQ40_RS00420	COG2814	Major facilitator Superfamily
CNQ40_RS00455	COG1597	lipid kinase activity
CNQ40_RS00480	COG2116	formate transmembrane transporter activity
CNQ40_RS00490	COG2964	Protein conserved in bacteria
CNQ40_RS00500	COG1760	l-serine dehydratase
CNQ40_RS00505	COG1760	l-serine dehydratase
CNQ40_RS00510	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CNQ40_RS00520	COG1438	arginine binding
CNQ40_RS00525	COG1438	arginine binding
CNQ40_RS00530	COG2235	arginine
CNQ40_RS00535	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ40_RS00540	COG0549	Belongs to the carbamate kinase family
CNQ40_RS00550	COG1288	antiporter activity
CNQ40_RS00560	COG0640	Transcriptional regulator
CNQ40_RS00565	COG0604	alcohol dehydrogenase
CNQ40_RS00575	COG0251	oxidation-reduction process
CNQ40_RS00585	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CNQ40_RS00590	COG2423	ornithine cyclodeaminase activity
CNQ40_RS00645	COG1396	sequence-specific DNA binding
CNQ40_RS00690	COG1674	ftsk spoiiie
CNQ40_RS00710	COG2946	Replication initiation factor
CNQ40_RS00790	COG0433	COG0433 Predicted ATPase
CNQ40_RS00835	COG0519	Catalyzes the synthesis of GMP from XMP
CNQ40_RS00835	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CNQ40_RS00840	COG1072	(Pantothenic acid kinase))
CNQ40_RS00855	COG2813	Specifically methylates the guanine in position
CNQ40_RS00860	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CNQ40_RS00865	COG1609	Transcriptional regulator
CNQ40_RS00870	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CNQ40_RS00875	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CNQ40_RS00880	COG0295	cytidine deaminase activity
CNQ40_RS00885	COG1744	ABC transporter substrate-binding protein PnrA-like
CNQ40_RS00890	COG1744	ABC transporter substrate-binding protein PnrA-like
CNQ40_RS00895	COG3845	ABC transporter
CNQ40_RS00900	COG4603	Belongs to the binding-protein-dependent transport system permease family
CNQ40_RS00905	COG1079	Belongs to the binding-protein-dependent transport system permease family
CNQ40_RS00925	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CNQ40_RS00940	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ40_RS00945	COG1120	ATPase activity
CNQ40_RS00950	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ40_RS00955	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ40_RS00960	COG1979	alcohol dehydrogenase
CNQ40_RS00965	COG0588	phosphoglycerate mutase activity
CNQ40_RS00970	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CNQ40_RS00975	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CNQ40_RS00985	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CNQ40_RS00990	COG0049	tRNA binding
CNQ40_RS00995	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CNQ40_RS01000	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CNQ40_RS01005	COG0351	phosphomethylpyrimidine kinase
CNQ40_RS01010	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CNQ40_RS01015	COG0051	transcription antitermination factor activity, RNA binding
CNQ40_RS01020	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CNQ40_RS01025	COG0088	Forms part of the polypeptide exit tunnel
CNQ40_RS01030	COG0089	rRNA binding
CNQ40_RS01035	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CNQ40_RS01040	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CNQ40_RS01045	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CNQ40_RS01050	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CNQ40_RS01055	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CNQ40_RS01060	COG0255	Belongs to the universal ribosomal protein uL29 family
CNQ40_RS01065	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CNQ40_RS01070	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CNQ40_RS01075	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CNQ40_RS01080	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CNQ40_RS01085	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CNQ40_RS01090	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CNQ40_RS01095	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CNQ40_RS01100	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CNQ40_RS01105	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CNQ40_RS01110	COG1841	ribosomal large subunit assembly
CNQ40_RS01115	COG0200	Binds to the 23S rRNA
CNQ40_RS01120	COG0201	protein transport
CNQ40_RS01125	COG0563	adenylate kinase activity
CNQ40_RS01130	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CNQ40_RS01135	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CNQ40_RS01140	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CNQ40_RS01145	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CNQ40_RS01150	COG0202	RNA polymerase activity
CNQ40_RS01155	COG0203	ribosomal protein L17
CNQ40_RS01170	COG1473	amidohydrolase
CNQ40_RS01175	COG1122	ATPase activity
CNQ40_RS01180	COG1122	ATPase activity
CNQ40_RS01195	COG0393	Putative heavy-metal-binding
CNQ40_RS01200	COG1114	Component of the transport system for branched-chain amino acids
CNQ40_RS01215	COG1126	abc transporter atp-binding protein
CNQ40_RS01220	COG0765	amino acid transport
CNQ40_RS01230	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CNQ40_RS01235	COG0110	maltose O-acetyltransferase activity
CNQ40_RS01240	COG1827	regulation of RNA biosynthetic process
CNQ40_RS01245	COG3942	CHAP domain
CNQ40_RS01245	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS01260	COG0039	L-malate dehydrogenase activity
CNQ40_RS01265	COG0193	aminoacyl-tRNA hydrolase activity
CNQ40_RS01270	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CNQ40_RS01275	COG2244	polysaccharide biosynthetic process
CNQ40_RS01280	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CNQ40_RS01295	COG1098	S1 RNA binding domain
CNQ40_RS01300	COG0037	tRNA processing
CNQ40_RS01305	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CNQ40_RS01310	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CNQ40_RS01315	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CNQ40_RS01320	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CNQ40_RS01325	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CNQ40_RS01480	COG3711	transcriptional antiterminator
CNQ40_RS01485	COG1263	PTS System
CNQ40_RS01485	COG2190	(PTS) system
CNQ40_RS01485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS01490	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS01495	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS01505	COG0596	Alpha beta hydrolase
CNQ40_RS01510	COG2169	Transcriptional regulator
CNQ40_RS01515	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CNQ40_RS01520	COG0519	Catalyzes the synthesis of GMP from XMP
CNQ40_RS01525	COG1418	mRNA catabolic process
CNQ40_RS01540	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CNQ40_RS01545	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ40_RS01550	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CNQ40_RS01555	COG0167	dihydroorotate dehydrogenase activity
CNQ40_RS01565	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CNQ40_RS01575	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CNQ40_RS01580	COG0626	cystathionine gamma-synthase activity
CNQ40_RS01585	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS01590	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS01600	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CNQ40_RS01605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CNQ40_RS01620	COG2217	Heavy metal translocating P-type atpase
CNQ40_RS01635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CNQ40_RS01640	COG3579	cysteine-type endopeptidase activity
CNQ40_RS01650	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CNQ40_RS01655	COG0346	lactoylglutathione lyase activity
CNQ40_RS01660	COG2076	Multidrug Resistance protein
CNQ40_RS01665	COG2076	Multidrug Resistance protein
CNQ40_RS01670	COG3469	chitinase activity
CNQ40_RS01675	COG3397	chitin binding
CNQ40_RS01685	COG1801	Protein of unknown function DUF72
CNQ40_RS01695	COG0527	aspartate kinase activity
CNQ40_RS01700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ40_RS01705	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CNQ40_RS01710	COG1104	cysteine desulfurase activity
CNQ40_RS01715	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS01720	COG5002	protein histidine kinase activity
CNQ40_RS01765	COG3835	regulator
CNQ40_RS01770	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ40_RS01785	COG0549	Belongs to the carbamate kinase family
CNQ40_RS01795	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CNQ40_RS01830	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CNQ40_RS01835	COG0628	permease
CNQ40_RS01860	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CNQ40_RS01870	COG1757	Na H antiporter
CNQ40_RS01875	COG1846	Transcriptional regulator
CNQ40_RS01880	COG0778	Nitroreductase
CNQ40_RS01885	COG0561	phosphatase activity
CNQ40_RS01895	COG2213	PTS system mannitol-specific
CNQ40_RS01900	COG3711	transcriptional antiterminator
CNQ40_RS01905	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS01915	COG2213	PTS system mannitol-specific
CNQ40_RS01920	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS01925	COG0246	Mannitol dehydrogenase
CNQ40_RS01930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CNQ40_RS01945	COG0577	efflux transmembrane transporter activity
CNQ40_RS01945	COG1136	(ABC) transporter
CNQ40_RS01950	COG0577	efflux transmembrane transporter activity
CNQ40_RS01970	COG2814	Major facilitator Superfamily
CNQ40_RS01980	COG1414	Transcriptional regulator
CNQ40_RS01990	COG0800	Aldolase
CNQ40_RS02000	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CNQ40_RS02005	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS02010	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CNQ40_RS02035	COG1070	Carbohydrate kinase
CNQ40_RS02040	COG4806	L-rhamnose isomerase
CNQ40_RS02045	COG0235	Class ii aldolase
CNQ40_RS02050	COG3254	rhamnose metabolic process
CNQ40_RS02070	COG3104	oligopeptide transport
CNQ40_RS02085	COG1388	LysM domain
CNQ40_RS02085	COG3942	CHAP domain
CNQ40_RS02095	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CNQ40_RS02100	COG0318	PFAM AMP-dependent synthetase and ligase
CNQ40_RS02105	COG1169	isochorismate synthase
CNQ40_RS02110	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CNQ40_RS02115	COG2267	carboxylic ester hydrolase activity
CNQ40_RS02120	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ40_RS02125	COG0363	glucosamine-6-phosphate deaminase activity
CNQ40_RS02130	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CNQ40_RS02135	COG1764	response to oxidative stress
CNQ40_RS02150	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS02155	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS02165	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CNQ40_RS02170	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CNQ40_RS02185	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CNQ40_RS02190	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CNQ40_RS02195	COG1316	TRANSCRIPTIONal
CNQ40_RS02200	COG0363	glucosamine-6-phosphate deaminase activity
CNQ40_RS02205	COG1285	pathogenesis
CNQ40_RS02225	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CNQ40_RS02230	COG1780	Probably involved in ribonucleotide reductase function
CNQ40_RS02235	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CNQ40_RS02260	COG0582	viral genome integration into host DNA
CNQ40_RS02290	COG1191	sigma factor activity
CNQ40_RS02305	COG1192	Involved in chromosome partitioning
CNQ40_RS02325	COG0582	viral genome integration into host DNA
CNQ40_RS02400	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CNQ40_RS02410	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CNQ40_RS02515	COG0656	L-ascorbic acid biosynthetic process
CNQ40_RS02525	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CNQ40_RS02540	COG1113	amino acid transport
CNQ40_RS02545	COG1757	Na H antiporter
CNQ40_RS02560	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CNQ40_RS02570	COG0039	L-malate dehydrogenase activity
CNQ40_RS02585	COG0583	DNA-binding transcription factor activity
CNQ40_RS02600	COG1733	regulation of RNA biosynthetic process
CNQ40_RS02605	COG0778	Nitroreductase
CNQ40_RS02610	COG0095	Lipoate-protein ligase
CNQ40_RS02630	COG1609	Transcriptional regulator
CNQ40_RS02640	COG2514	catechol 2,3-dioxygenase activity
CNQ40_RS02645	COG1349	DNA-binding transcription factor activity
CNQ40_RS02660	COG0534	Mate efflux family protein
CNQ40_RS02675	COG0217	transcriptional regulatory protein
CNQ40_RS02690	COG0346	lactoylglutathione lyase activity
CNQ40_RS02705	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CNQ40_RS02710	COG2244	polysaccharide biosynthetic process
CNQ40_RS02715	COG1187	pseudouridine synthase activity
CNQ40_RS02730	COG3594	Acyltransferase
CNQ40_RS02735	COG1125	glycine betaine transport
CNQ40_RS02735	COG0517	IMP dehydrogenase activity
CNQ40_RS02740	COG1732	Glycine betaine
CNQ40_RS02745	COG1438	arginine binding
CNQ40_RS02750	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CNQ40_RS02755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CNQ40_RS02760	COG0564	pseudouridine synthase activity
CNQ40_RS02770	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CNQ40_RS02775	COG3679	Belongs to the UPF0342 family
CNQ40_RS02790	COG3481	metal-dependent phosphohydrolase, HD sub domain
CNQ40_RS02795	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CNQ40_RS02805	COG0537	adenosine 5'-monophosphoramidase activity
CNQ40_RS02810	COG1131	(ABC) transporter
CNQ40_RS02815	COG4473	ABC transporter
CNQ40_RS02820	COG0510	thiamine kinase activity
CNQ40_RS02825	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CNQ40_RS02840	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS02840	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS02840	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS02850	COG3684	Belongs to the aldolase LacD family
CNQ40_RS02855	COG3557	Belongs to the UPF0374 family
CNQ40_RS02865	COG0628	permease
CNQ40_RS02870	COG1253	flavin adenine dinucleotide binding
CNQ40_RS02875	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CNQ40_RS02900	COG0542	response to heat
CNQ40_RS02915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS02920	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ40_RS02940	COG0544	peptidyl-prolyl cis-trans isomerase activity
CNQ40_RS02950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS02950	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS02950	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS02955	COG1105	Belongs to the carbohydrate kinase PfkB family
CNQ40_RS02960	COG1349	DNA-binding transcription factor activity
CNQ40_RS02970	COG0210	DNA helicase
CNQ40_RS02975	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CNQ40_RS02985	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CNQ40_RS02990	COG0154	amidase activity
CNQ40_RS02995	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CNQ40_RS03000	COG1597	lipid kinase activity
CNQ40_RS03005	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CNQ40_RS03015	COG2197	response regulator
CNQ40_RS03020	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ40_RS03025	COG0531	amino acid
CNQ40_RS03040	COG0154	amidase activity
CNQ40_RS03055	COG1428	Deoxynucleoside kinase
CNQ40_RS03105	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CNQ40_RS03120	COG1054	Belongs to the UPF0176 family
CNQ40_RS03165	COG2217	Heavy metal translocating P-type atpase
CNQ40_RS03170	COG1285	pathogenesis
CNQ40_RS03180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ40_RS03185	COG0556	nucleotide-excision repair
CNQ40_RS03190	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CNQ40_RS03200	COG1660	Displays ATPase and GTPase activities
CNQ40_RS03210	COG1481	regulation of sporulation
CNQ40_RS03230	COG0740	serine-type endopeptidase activity
CNQ40_RS03260	COG0584	glycerophosphoryl diester phosphodiesterase
CNQ40_RS03265	COG2816	NAD+ diphosphatase activity
CNQ40_RS03270	COG1278	Cold shock
CNQ40_RS03280	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CNQ40_RS03285	COG2755	lipolytic protein G-D-S-L family
CNQ40_RS03285	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CNQ40_RS03290	COG1122	ATPase activity
CNQ40_RS03300	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CNQ40_RS03305	COG0477	Major facilitator Superfamily
CNQ40_RS03320	COG1132	(ABC) transporter
CNQ40_RS03325	COG1132	(ABC) transporter
CNQ40_RS03340	COG1309	transcriptional regulator
CNQ40_RS03345	COG0577	efflux transmembrane transporter activity
CNQ40_RS03350	COG1136	(ABC) transporter
CNQ40_RS03355	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CNQ40_RS03360	COG1242	4 iron, 4 sulfur cluster binding
CNQ40_RS03365	COG0671	phosphoesterase, PA-phosphatase related
CNQ40_RS03380	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS03380	COG1388	LysM domain
CNQ40_RS03385	COG0495	leucyl-tRNA aminoacylation
CNQ40_RS03400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ40_RS03405	COG1126	abc transporter atp-binding protein
CNQ40_RS03410	COG0765	amino acid transport
CNQ40_RS03415	COG4166	transmembrane transport
CNQ40_RS03435	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CNQ40_RS03445	COG1187	pseudouridine synthase activity
CNQ40_RS03450	COG1011	Hydrolase
CNQ40_RS03465	COG2337	Toxic component of a toxin-antitoxin (TA) module
CNQ40_RS03470	COG0673	inositol 2-dehydrogenase activity
CNQ40_RS03475	COG3711	transcriptional antiterminator
CNQ40_RS03505	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS03520	COG3964	amidohydrolase
CNQ40_RS03540	COG0187	DNA topoisomerase II activity
CNQ40_RS03545	COG1671	Belongs to the UPF0178 family
CNQ40_RS03550	COG1181	Belongs to the D-alanine--D-alanine ligase family
CNQ40_RS03555	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CNQ40_RS03575	COG0736	holo-[acyl-carrier-protein] synthase activity
CNQ40_RS03580	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CNQ40_RS03605	COG0681	Belongs to the peptidase S26 family
CNQ40_RS03615	COG2365	Tyrosine phosphatase family
CNQ40_RS03635	COG0531	amino acid
CNQ40_RS03645	COG1174	glycine betaine transport
CNQ40_RS03665	COG0346	lactoylglutathione lyase activity
CNQ40_RS03670	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CNQ40_RS03690	COG3158	transport of potassium into the cell
CNQ40_RS03700	COG2217	Heavy metal translocating P-type atpase
CNQ40_RS03710	COG4989	oxidoreductase activity
CNQ40_RS03715	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CNQ40_RS03715	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CNQ40_RS03720	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CNQ40_RS03725	COG0237	dephospho-CoA kinase activity
CNQ40_RS03730	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CNQ40_RS03735	COG3611	Membrane attachment protein
CNQ40_RS03740	COG1484	DNA-dependent DNA replication
CNQ40_RS03760	COG1215	transferase activity, transferring glycosyl groups
CNQ40_RS03785	COG1126	abc transporter atp-binding protein
CNQ40_RS03790	COG0765	amino acid transport
CNQ40_RS03795	COG0371	Dehydrogenase
CNQ40_RS03800	COG0343	queuine tRNA-ribosyltransferase activity
CNQ40_RS03805	COG1862	Preprotein translocase
CNQ40_RS03820	COG1454	alcohol dehydrogenase
CNQ40_RS03820	COG1012	belongs to the aldehyde dehydrogenase family
CNQ40_RS03825	COG1304	FMN binding
CNQ40_RS03860	COG4166	transmembrane transport
CNQ40_RS03870	COG0601	transmembrane transport
CNQ40_RS03875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CNQ40_RS03885	COG4608	Belongs to the ABC transporter superfamily
CNQ40_RS03895	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CNQ40_RS03900	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CNQ40_RS03905	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CNQ40_RS03910	COG2315	Protein conserved in bacteria
CNQ40_RS03920	COG3759	membrane
CNQ40_RS03930	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CNQ40_RS03930	COG0456	acetyltransferase
CNQ40_RS03935	COG0659	secondary active sulfate transmembrane transporter activity
CNQ40_RS03945	COG2855	membrane
CNQ40_RS03965	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS03970	COG2205	protein histidine kinase activity
CNQ40_RS03975	COG4975	Glucose uptake
CNQ40_RS03980	COG0531	amino acid
CNQ40_RS03985	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CNQ40_RS03985	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CNQ40_RS04000	COG3973	AAA domain
CNQ40_RS04005	COG0084	hydrolase, TatD family'
CNQ40_RS04010	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CNQ40_RS04015	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CNQ40_RS04025	COG3842	ATPase activity
CNQ40_RS04030	COG1803	Methylglyoxal synthase
CNQ40_RS04035	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CNQ40_RS04040	COG1132	(ABC) transporter
CNQ40_RS04055	COG3584	3D domain protein
CNQ40_RS04070	COG0561	phosphatase activity
CNQ40_RS04075	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CNQ40_RS04080	COG0280	phosphate acetyltransferase
CNQ40_RS04085	COG0802	atpase or kinase
CNQ40_RS04100	COG1609	Transcriptional regulator
CNQ40_RS04105	COG2017	converts alpha-aldose to the beta-anomer
CNQ40_RS04110	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ40_RS04120	COG2190	(PTS) system
CNQ40_RS04120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS04120	COG1263	PTS System
CNQ40_RS04135	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CNQ40_RS04140	COG4753	response regulator
CNQ40_RS04140	COG2207	Transcriptional regulator
CNQ40_RS04160	COG1131	(ABC) transporter
CNQ40_RS04170	COG0789	Transcriptional regulator
CNQ40_RS04180	COG0582	viral genome integration into host DNA
CNQ40_RS04185	COG0582	viral genome integration into host DNA
CNQ40_RS04260	COG3064	Membrane
CNQ40_RS04260	COG4991	sh3 domain protein
CNQ40_RS04260	COG0515	serine threonine protein kinase
CNQ40_RS04275	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CNQ40_RS04285	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CNQ40_RS04290	COG3223	Belongs to the PsiE family
CNQ40_RS04295	COG1408	metallophosphoesterase
CNQ40_RS04300	COG0006	proline dipeptidase activity
CNQ40_RS04305	COG1694	Mazg nucleotide pyrophosphohydrolase
CNQ40_RS04310	COG1302	Protein conserved in bacteria
CNQ40_RS04315	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CNQ40_RS04320	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CNQ40_RS04325	COG1570	exodeoxyribonuclease VII activity
CNQ40_RS04330	COG1722	exodeoxyribonuclease VII activity
CNQ40_RS04335	COG0142	geranyltranstransferase activity
CNQ40_RS04340	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CNQ40_RS04345	COG1438	arginine binding
CNQ40_RS04350	COG0497	DNA recombination
CNQ40_RS04375	COG2001	Belongs to the MraZ family
CNQ40_RS04380	COG0275	rRNA processing
CNQ40_RS04390	COG0768	penicillin binding
CNQ40_RS04395	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CNQ40_RS04400	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CNQ40_RS04405	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CNQ40_RS04410	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CNQ40_RS04415	COG0849	cell division
CNQ40_RS04420	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CNQ40_RS04425	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CNQ40_RS04430	COG1799	cell septum assembly
CNQ40_RS04435	COG0762	integral membrane protein
CNQ40_RS04440	COG2302	S4 RNA-binding domain
CNQ40_RS04445	COG3599	regulation of cell shape
CNQ40_RS04450	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CNQ40_RS04455	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CNQ40_RS04475	COG0673	inositol 2-dehydrogenase activity
CNQ40_RS04485	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CNQ40_RS04485	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CNQ40_RS04490	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS04515	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS04520	COG1447	Phosphotransferase system cellobiose-specific component IIA
CNQ40_RS04525	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS04530	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS04570	COG1396	sequence-specific DNA binding
CNQ40_RS04635	COG0629	single-stranded DNA binding
CNQ40_RS04860	COG0574	Belongs to the PEP-utilizing enzyme family
CNQ40_RS04860	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ40_RS04865	COG0517	IMP dehydrogenase activity
CNQ40_RS04870	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CNQ40_RS04875	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CNQ40_RS04875	COG0392	lysyltransferase activity
CNQ40_RS04920	COG0105	UTP biosynthetic process
CNQ40_RS04935	COG0561	phosphatase activity
CNQ40_RS04945	COG2252	PERMEase
CNQ40_RS04955	COG2814	Major facilitator Superfamily
CNQ40_RS04965	COG0587	DNA-directed DNA polymerase activity
CNQ40_RS04970	COG0205	6-phosphofructokinase activity
CNQ40_RS04985	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CNQ40_RS04990	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CNQ40_RS04995	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS05000	COG5002	protein histidine kinase activity
CNQ40_RS05095	COG1116	anion transmembrane transporter activity
CNQ40_RS05100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CNQ40_RS05115	COG1914	H( )-stimulated, divalent metal cation uptake system
CNQ40_RS05125	COG2508	Transcriptional regulator
CNQ40_RS05130	COG4166	transmembrane transport
CNQ40_RS05135	COG0402	S-adenosylhomocysteine deaminase activity
CNQ40_RS05140	COG0402	S-adenosylhomocysteine deaminase activity
CNQ40_RS05145	COG1956	GAF domain-containing protein
CNQ40_RS05160	COG0110	maltose O-acetyltransferase activity
CNQ40_RS05175	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CNQ40_RS05180	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CNQ40_RS05185	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CNQ40_RS05190	COG1609	Transcriptional regulator
CNQ40_RS05225	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CNQ40_RS05255	COG0456	acetyltransferase
CNQ40_RS05335	COG4974	Belongs to the 'phage' integrase family
CNQ40_RS05350	COG1396	sequence-specific DNA binding
CNQ40_RS05485	COG0740	serine-type endopeptidase activity
CNQ40_RS05555	COG4824	toxin secretion phage lysis holin
CNQ40_RS05560	COG1388	LysM domain
CNQ40_RS05560	COG3942	CHAP domain
CNQ40_RS05600	COG1132	(ABC) transporter
CNQ40_RS05615	COG1113	amino acid transport
CNQ40_RS05635	COG0247	lactate metabolic process
CNQ40_RS05640	COG1139	Iron-sulfur cluster binding protein
CNQ40_RS05655	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
CNQ40_RS05660	COG1074	ATP-dependent DNA helicase activity
CNQ40_RS05665	COG1733	regulation of RNA biosynthetic process
CNQ40_RS05670	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CNQ40_RS05675	COG0072	phenylalanine-tRNA ligase activity
CNQ40_RS05675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CNQ40_RS05680	COG0765	amino acid transport
CNQ40_RS05685	COG0765	amino acid transport
CNQ40_RS05690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ40_RS05700	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CNQ40_RS05705	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CNQ40_RS05710	COG0622	Phosphoesterase
CNQ40_RS05715	COG1349	DNA-binding transcription factor activity
CNQ40_RS05730	COG3037	sugar-specific permease SgaT UlaA
CNQ40_RS05740	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CNQ40_RS05745	COG3623	hexulose-6-phosphate isomerase
CNQ40_RS05755	COG0517	IMP dehydrogenase activity
CNQ40_RS05760	COG2171	N-acyltransferase activity
CNQ40_RS05765	COG1473	amidohydrolase
CNQ40_RS05770	COG0668	transmembrane transport
CNQ40_RS05785	COG0656	L-ascorbic acid biosynthetic process
CNQ40_RS05790	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CNQ40_RS05810	COG1078	dGTPase activity
CNQ40_RS05815	COG0095	Lipoate-protein ligase
CNQ40_RS05830	COG0504	CTP synthase activity
CNQ40_RS05835	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CNQ40_RS05840	COG3331	DNA recombination
CNQ40_RS05845	COG4474	Belongs to the UPF0398 family
CNQ40_RS05850	COG3599	regulation of cell shape
CNQ40_RS05860	COG0116	Belongs to the methyltransferase superfamily
CNQ40_RS05865	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CNQ40_RS05870	COG3935	DnaD domain protein
CNQ40_RS05875	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CNQ40_RS05880	COG2188	Transcriptional regulator
CNQ40_RS05890	COG1446	asparaginase
CNQ40_RS05895	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS05900	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS05910	COG1199	ATP-dependent helicase activity
CNQ40_RS05925	COG1666	GTP binding
CNQ40_RS05930	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CNQ40_RS05935	COG0191	fructose-bisphosphate aldolase activity
CNQ40_RS05945	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CNQ40_RS05950	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CNQ40_RS05955	COG0254	rRNA binding
CNQ40_RS05965	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CNQ40_RS05975	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CNQ40_RS05990	COG1940	carbohydrate kinase activity
CNQ40_RS05995	COG3237	CsbD-like
CNQ40_RS06000	COG0778	Nitroreductase
CNQ40_RS06005	COG1854	S-ribosylhomocysteine lyase activity
CNQ40_RS06010	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CNQ40_RS06015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CNQ40_RS06025	COG0737	Belongs to the 5'-nucleotidase family
CNQ40_RS06030	COG4470	Protein conserved in bacteria
CNQ40_RS06035	COG0647	UMP catabolic process
CNQ40_RS06050	COG1307	EDD domain protein, DegV family
CNQ40_RS06055	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CNQ40_RS06060	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS06065	COG5002	protein histidine kinase activity
CNQ40_RS06080	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CNQ40_RS06090	COG0701	Predicted permease
CNQ40_RS06095	COG3689	TIGRFAM TIGR03943 family protein
CNQ40_RS06110	COG4472	Bacterial protein of unknown function (DUF965)
CNQ40_RS06115	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CNQ40_RS06120	COG3906	Belongs to the UPF0473 family
CNQ40_RS06135	COG3493	citrate carrier protein
CNQ40_RS06140	COG3290	protein histidine kinase activity
CNQ40_RS06145	COG4565	transcriptional regulatory protein
CNQ40_RS06150	COG0446	pyridine nucleotide-disulphide oxidoreductase
CNQ40_RS06155	COG1316	TRANSCRIPTIONal
CNQ40_RS06160	COG0028	Belongs to the TPP enzyme family
CNQ40_RS06165	COG3527	Alpha-acetolactate decarboxylase
CNQ40_RS06185	COG1175	transmembrane transport
CNQ40_RS06195	COG3842	ATPase activity
CNQ40_RS06205	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CNQ40_RS06210	COG0402	S-adenosylhomocysteine deaminase activity
CNQ40_RS06230	COG0431	NADPH-dependent FMN reductase
CNQ40_RS06230	COG1053	succinate dehydrogenase
CNQ40_RS06230	COG3976	FMN-binding domain protein
CNQ40_RS06250	COG1408	metallophosphoesterase
CNQ40_RS06255	COG4209	transmembrane transport
CNQ40_RS06260	COG0395	ABC-type sugar transport system, permease component
CNQ40_RS06275	COG3458	cephalosporin-C deacetylase activity
CNQ40_RS06290	COG3459	Glycosyltransferase 36 associated
CNQ40_RS06295	COG1609	Transcriptional regulator
CNQ40_RS06310	COG2188	Transcriptional regulator
CNQ40_RS06315	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS06320	COG0673	inositol 2-dehydrogenase activity
CNQ40_RS06325	COG2707	UPF0756 membrane protein
CNQ40_RS06340	COG1293	RNA-binding protein homologous to eukaryotic snRNP
CNQ40_RS06370	COG1122	ATPase activity
CNQ40_RS06390	COG0561	phosphatase activity
CNQ40_RS06395	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS06400	COG3850	Histidine kinase
CNQ40_RS06400	COG5002	protein histidine kinase activity
CNQ40_RS06415	COG1368	sulfuric ester hydrolase activity
CNQ40_RS06420	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CNQ40_RS06430	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CNQ40_RS06435	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CNQ40_RS06445	COG0779	Required for maturation of 30S ribosomal subunits
CNQ40_RS06450	COG0195	Participates in both transcription termination and antitermination
CNQ40_RS06455	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CNQ40_RS06465	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CNQ40_RS06470	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CNQ40_RS06560	COG4824	toxin secretion phage lysis holin
CNQ40_RS06570	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CNQ40_RS06575	COG0196	riboflavin kinase activity
CNQ40_RS06585	COG1695	Transcriptional regulator
CNQ40_RS06605	COG0772	Belongs to the SEDS family
CNQ40_RS06610	COG0583	DNA-binding transcription factor activity
CNQ40_RS06615	COG0583	DNA-binding transcription factor activity
CNQ40_RS06630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CNQ40_RS06635	COG1420	regulation of RNA biosynthetic process
CNQ40_RS06640	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CNQ40_RS06645	COG0443	Heat shock 70 kDa protein
CNQ40_RS06655	COG0484	heat shock protein binding
CNQ40_RS06660	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CNQ40_RS06665	COG2183	response to ionizing radiation
CNQ40_RS06670	COG3091	SprT-like family
CNQ40_RS06680	COG0436	Aminotransferase
CNQ40_RS06730	COG2268	Band 7 protein
CNQ40_RS06755	COG1309	transcriptional regulator
CNQ40_RS06765	COG2188	Transcriptional regulator
CNQ40_RS06775	COG0492	ferredoxin-NADP+ reductase activity
CNQ40_RS06790	COG0577	efflux transmembrane transporter activity
CNQ40_RS06790	COG1136	(ABC) transporter
CNQ40_RS06790	COG0577	efflux transmembrane transporter activity
CNQ40_RS06790	COG1136	(ABC) transporter
CNQ40_RS06800	COG3833	ABC-type maltose transport systems, permease component
CNQ40_RS06805	COG1175	transmembrane transport
CNQ40_RS06810	COG2182	Extracellular solute-binding protein
CNQ40_RS06820	COG0366	Alpha amylase catalytic
CNQ40_RS06825	COG0366	Alpha amylase catalytic
CNQ40_RS06830	COG0366	Alpha amylase catalytic
CNQ40_RS06845	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CNQ40_RS06875	COG0371	Dehydrogenase
CNQ40_RS06880	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CNQ40_RS06885	COG2376	Dihydroxyacetone kinase
CNQ40_RS06890	COG1461	Dihydroxyacetone kinase
CNQ40_RS06900	COG3425	synthase
CNQ40_RS06910	COG0628	permease
CNQ40_RS06920	COG1278	Cold shock
CNQ40_RS06935	COG2814	Major facilitator Superfamily
CNQ40_RS06940	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CNQ40_RS06945	COG4109	DRTGG domain
CNQ40_RS06950	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CNQ40_RS06955	COG2824	Alkylphosphonate utilization operon protein PhnA
CNQ40_RS06970	COG0513	Belongs to the DEAD box helicase family
CNQ40_RS06985	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CNQ40_RS06990	COG2384	SAM-dependent methyltransferase
CNQ40_RS06995	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CNQ40_RS07000	COG2195	Cleaves the N-terminal amino acid of tripeptides
CNQ40_RS07015	COG0746	molybdenum cofactor guanylyltransferase activity
CNQ40_RS07020	COG2116	formate transmembrane transporter activity
CNQ40_RS07035	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CNQ40_RS07040	COG3383	formate dehydrogenase (NAD+) activity
CNQ40_RS07045	COG0303	'Molybdopterin
CNQ40_RS07055	COG0315	cyclic pyranopterin monophosphate synthase activity
CNQ40_RS07070	COG0521	Mo-molybdopterin cofactor biosynthetic process
CNQ40_RS07080	COG0725	ABC transporter, periplasmic molybdate-binding protein
CNQ40_RS07085	COG4149	molybdate abc transporter
CNQ40_RS07090	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CNQ40_RS07095	COG2217	Heavy metal translocating P-type atpase
CNQ40_RS07110	COG1286	toxin biosynthetic process
CNQ40_RS07115	COG1193	negative regulation of DNA recombination
CNQ40_RS07120	COG3118	belongs to the thioredoxin family
CNQ40_RS07125	COG0322	excinuclease ABC activity
CNQ40_RS07135	COG4152	abc transporter atp-binding protein
CNQ40_RS07140	COG1668	transmembrane transport
CNQ40_RS07145	COG1609	Transcriptional regulator
CNQ40_RS07150	COG1486	melibiose metabolic process
CNQ40_RS07160	COG0488	(ABC) transporter
CNQ40_RS07165	COG2081	HI0933 family
CNQ40_RS07170	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CNQ40_RS07180	COG0166	Belongs to the GPI family
CNQ40_RS07185	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CNQ40_RS07210	COG1396	sequence-specific DNA binding
CNQ40_RS07265	COG3935	DnaD domain protein
CNQ40_RS07385	COG3728	DNA packaging
CNQ40_RS07385	COG5484	DNA packaging
CNQ40_RS07400	COG2369	cell adhesion
CNQ40_RS07570	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CNQ40_RS07685	COG1269	ATP hydrolysis coupled proton transport
CNQ40_RS07690	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CNQ40_RS07695	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
CNQ40_RS07700	COG1527	subunit (C
CNQ40_RS07705	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
CNQ40_RS07710	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
CNQ40_RS07715	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
CNQ40_RS07720	COG1394	ATPase activity, coupled to movement of substances
CNQ40_RS07730	COG1595	DNA-templated transcription, initiation
CNQ40_RS07745	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
CNQ40_RS07750	COG0019	diaminopimelate decarboxylase activity
CNQ40_RS07775	COG2151	metal-sulfur cluster biosynthetic enzyme
CNQ40_RS07780	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ40_RS07795	COG3711	transcriptional antiterminator
CNQ40_RS07810	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS07810	COG3711	transcriptional antiterminator
CNQ40_RS07820	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS07820	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS07820	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS07825	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS07835	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CNQ40_RS07845	COG0741	lytic transglycosylase activity
CNQ40_RS07850	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CNQ40_RS07855	COG0358	DNA primase activity
CNQ40_RS07860	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CNQ40_RS07870	COG2996	Protein conserved in bacteria
CNQ40_RS07875	COG0735	belongs to the Fur family
CNQ40_RS07885	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CNQ40_RS07895	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS07915	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CNQ40_RS07930	COG4974	Belongs to the 'phage' integrase family
CNQ40_RS07935	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CNQ40_RS07940	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CNQ40_RS07945	COG1187	pseudouridine synthase activity
CNQ40_RS07950	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CNQ40_RS07970	COG0514	ATP-dependent DNA helicase (RecQ)
CNQ40_RS07980	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CNQ40_RS07985	COG0539	negative regulation of cytoplasmic translation
CNQ40_RS07990	COG1160	GTP binding
CNQ40_RS08010	COG0457	Tetratricopeptide repeat
CNQ40_RS08015	COG5582	Belongs to the UPF0302 family
CNQ40_RS08020	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CNQ40_RS08025	COG1694	Mazg nucleotide pyrophosphohydrolase
CNQ40_RS08030	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CNQ40_RS08035	COG0617	tRNA 3'-terminal CCA addition
CNQ40_RS08050	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CNQ40_RS08055	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CNQ40_RS08065	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CNQ40_RS08070	COG0287	Prephenate dehydrogenase
CNQ40_RS08080	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CNQ40_RS08085	COG0077	Prephenate dehydratase
CNQ40_RS08095	COG1307	EDD domain protein, DegV family
CNQ40_RS08120	COG0488	(ABC) transporter
CNQ40_RS08125	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CNQ40_RS08135	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CNQ40_RS08140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CNQ40_RS08145	COG4224	UPF0291 protein
CNQ40_RS08155	COG2814	Major facilitator Superfamily
CNQ40_RS08160	COG1388	LysM domain
CNQ40_RS08160	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS08170	COG0735	belongs to the Fur family
CNQ40_RS08175	COG0446	pyridine nucleotide-disulphide oxidoreductase
CNQ40_RS08180	COG2816	NAD+ diphosphatase activity
CNQ40_RS08195	COG2207	Transcriptional regulator
CNQ40_RS08200	COG1132	(ABC) transporter
CNQ40_RS08205	COG1132	(ABC) transporter
CNQ40_RS08225	COG0753	catalase activity
CNQ40_RS08230	COG0415	Belongs to the DNA photolyase family
CNQ40_RS08240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS08240	COG2190	(PTS) system
CNQ40_RS08240	COG1263	PTS System
CNQ40_RS08245	COG0366	Alpha amylase catalytic
CNQ40_RS08255	COG1609	Transcriptional regulator
CNQ40_RS08265	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS08270	COG1263	PTS System
CNQ40_RS08270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS08270	COG2190	(PTS) system
CNQ40_RS08280	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
CNQ40_RS08290	COG1227	inorganic diphosphatase activity
CNQ40_RS08295	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CNQ40_RS08300	COG1882	Formate acetyltransferase
CNQ40_RS08305	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CNQ40_RS08310	COG0187	DNA topoisomerase II activity
CNQ40_RS08315	COG1832	CoA-binding protein
CNQ40_RS08320	COG4766	ethanolamine catabolic process
CNQ40_RS08325	COG3192	ethanolamine utilization protein
CNQ40_RS08330	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
CNQ40_RS08340	COG4869	propanediol catabolic process
CNQ40_RS08355	COG1012	belongs to the aldehyde dehydrogenase family
CNQ40_RS08355	COG1454	alcohol dehydrogenase
CNQ40_RS08370	COG4302	ethanolamine ammonia-lyase activity
CNQ40_RS08375	COG4303	Ethanolamine ammonia lyase large subunit
CNQ40_RS08405	COG2096	Adenosyltransferase
CNQ40_RS08415	COG1120	ATPase activity
CNQ40_RS08420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ40_RS08425	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ40_RS08430	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CNQ40_RS08440	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CNQ40_RS08445	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CNQ40_RS08450	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CNQ40_RS08460	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CNQ40_RS08465	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CNQ40_RS08470	COG1266	CAAX protease self-immunity
CNQ40_RS08475	COG0758	DNA mediated transformation
CNQ40_RS08480	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CNQ40_RS08490	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CNQ40_RS08495	COG0583	DNA-binding transcription factor activity
CNQ40_RS08505	COG0508	dehydrogenase complex catalyzes the overall conversion of
CNQ40_RS08510	COG0022	dehydrogenase e1 component
CNQ40_RS08515	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CNQ40_RS08520	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ40_RS08525	COG3426	butyrate kinase activity
CNQ40_RS08530	COG0280	phosphate acetyltransferase
CNQ40_RS08550	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS08560	COG0346	lactoylglutathione lyase activity
CNQ40_RS08570	COG0604	alcohol dehydrogenase
CNQ40_RS08575	COG0577	efflux transmembrane transporter activity
CNQ40_RS08580	COG1136	(ABC) transporter
CNQ40_RS08590	COG1131	(ABC) transporter
CNQ40_RS08605	COG0681	Belongs to the peptidase S26 family
CNQ40_RS08610	COG3409	Peptidoglycan-binding domain 1 protein
CNQ40_RS08610	COG0793	Belongs to the peptidase S41A family
CNQ40_RS08615	COG4479	Belongs to the UPF0346 family
CNQ40_RS08620	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CNQ40_RS08625	COG4698	Protein conserved in bacteria
CNQ40_RS08630	COG2755	lipolytic protein G-D-S-L family
CNQ40_RS08635	COG1307	EDD domain protein, DegV family
CNQ40_RS08640	COG1272	protein, Hemolysin III
CNQ40_RS08650	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CNQ40_RS08655	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CNQ40_RS08655	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CNQ40_RS08660	COG5416	Lipopolysaccharide assembly protein A domain
CNQ40_RS08665	COG0300	oxidoreductase activity
CNQ40_RS08670	COG1234	tRNA 3'-trailer cleavage
CNQ40_RS08680	COG1837	Belongs to the UPF0109 family
CNQ40_RS08685	COG0228	four-way junction DNA binding
CNQ40_RS08690	COG1214	PFAM Peptidase M22, glycoprotease
CNQ40_RS08690	COG0456	acetyltransferase
CNQ40_RS08695	COG0431	NADPH-dependent FMN reductase
CNQ40_RS08700	COG0789	Transcriptional regulator
CNQ40_RS08705	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CNQ40_RS08710	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CNQ40_RS08715	COG1683	Conserved Protein
CNQ40_RS08720	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS08725	COG5002	protein histidine kinase activity
CNQ40_RS08735	COG0436	Aminotransferase
CNQ40_RS08740	COG0383	alpha-mannosidase activity
CNQ40_RS08750	COG1609	Transcriptional regulator
CNQ40_RS08755	COG0583	DNA-binding transcription factor activity
CNQ40_RS08770	COG0284	orotidine-5'-phosphate decarboxylase activity
CNQ40_RS08785	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CNQ40_RS08790	COG0505	Belongs to the CarA family
CNQ40_RS08795	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CNQ40_RS08800	COG0540	Belongs to the ATCase OTCase family
CNQ40_RS08805	COG2233	PERMEase
CNQ40_RS08815	COG0564	pseudouridine synthase activity
CNQ40_RS08820	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CNQ40_RS08830	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CNQ40_RS08835	COG1278	Cold shock
CNQ40_RS08845	COG0328	RNA-DNA hybrid ribonuclease activity
CNQ40_RS08850	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CNQ40_RS08855	COG0710	3-dehydroquinate dehydratase activity
CNQ40_RS08860	COG1132	(ABC) transporter
CNQ40_RS08865	COG1132	(ABC) transporter
CNQ40_RS08870	COG3763	UPF0154 protein
CNQ40_RS08880	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CNQ40_RS08900	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CNQ40_RS08915	COG1131	(ABC) transporter
CNQ40_RS08925	COG1609	Transcriptional regulator
CNQ40_RS08930	COG0006	proline dipeptidase activity
CNQ40_RS08935	COG4980	gas vesicle protein
CNQ40_RS08945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CNQ40_RS08950	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CNQ40_RS08955	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CNQ40_RS08960	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CNQ40_RS08965	COG0322	excinuclease ABC activity
CNQ40_RS08970	COG1950	PFAM Membrane protein of
CNQ40_RS08980	COG3595	metallopeptidase activity
CNQ40_RS08985	COG0704	Plays a role in the regulation of phosphate uptake
CNQ40_RS08990	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CNQ40_RS08995	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CNQ40_RS09000	COG0581	inorganic phosphate transmembrane transporter activity
CNQ40_RS09005	COG0573	inorganic phosphate transmembrane transporter activity
CNQ40_RS09015	COG2177	Part of the ABC transporter FtsEX involved in
CNQ40_RS09020	COG2884	Cell division ATP-binding protein ftsE
CNQ40_RS09030	COG0653	protein targeting
CNQ40_RS09060	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS09070	COG1739	Uncharacterized protein family UPF0029
CNQ40_RS09080	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS09100	COG0151	Belongs to the GarS family
CNQ40_RS09105	COG0138	bifunctional purine biosynthesis protein purh
CNQ40_RS09110	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CNQ40_RS09115	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CNQ40_RS09125	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CNQ40_RS09130	COG0047	phosphoribosylformylglycinamidine synthase activity
CNQ40_RS09135	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CNQ40_RS09140	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CNQ40_RS09145	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CNQ40_RS09150	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CNQ40_RS09160	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CNQ40_RS09165	COG4166	transmembrane transport
CNQ40_RS09175	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CNQ40_RS09180	COG4876	unkown
CNQ40_RS09195	COG0628	permease
CNQ40_RS09205	COG0366	Alpha amylase catalytic
CNQ40_RS09205	COG1470	cell adhesion involved in biofilm formation
CNQ40_RS09215	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS09220	COG3715	PTS system
CNQ40_RS09225	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS09225	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS09235	COG1105	Belongs to the carbohydrate kinase PfkB family
CNQ40_RS09240	COG3684	Belongs to the aldolase LacD family
CNQ40_RS09245	COG2222	sugar isomerase
CNQ40_RS09250	COG2188	Transcriptional regulator
CNQ40_RS09255	COG1442	glycosyl transferase family 8
CNQ40_RS09260	COG1442	glycosyl transferase family 8
CNQ40_RS09265	COG1368	sulfuric ester hydrolase activity
CNQ40_RS09275	COG0583	DNA-binding transcription factor activity
CNQ40_RS09290	COG3227	Zinc metalloprotease (Elastase)
CNQ40_RS09310	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS09310	COG3942	CHAP domain
CNQ40_RS09320	COG1349	DNA-binding transcription factor activity
CNQ40_RS09335	COG0726	polysaccharide deacetylase
CNQ40_RS09345	COG4974	Belongs to the 'phage' integrase family
CNQ40_RS09370	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS09380	COG3328	transposase activity
CNQ40_RS09410	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CNQ40_RS09415	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CNQ40_RS09420	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CNQ40_RS09435	COG5002	protein histidine kinase activity
CNQ40_RS09465	COG1136	(ABC) transporter
CNQ40_RS09480	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CNQ40_RS09500	COG3328	transposase activity
CNQ40_RS09510	COG0791	NLP P60 protein
CNQ40_RS09510	COG0741	lytic transglycosylase activity
CNQ40_RS09560	COG2946	Replication initiation factor
CNQ40_RS09590	COG1674	ftsk spoiiie
CNQ40_RS09620	COG0335	large ribosomal subunit rRNA binding
CNQ40_RS09625	COG0336	Belongs to the RNA methyltransferase TrmD family
CNQ40_RS09630	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CNQ40_RS09635	COG1914	H( )-stimulated, divalent metal cation uptake system
CNQ40_RS09645	COG0398	Pfam SNARE associated Golgi protein
CNQ40_RS09650	COG0584	glycerophosphoryl diester phosphodiesterase
CNQ40_RS09670	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CNQ40_RS09680	COG4129	membrane
CNQ40_RS09690	COG1940	carbohydrate kinase activity
CNQ40_RS09695	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CNQ40_RS09710	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CNQ40_RS09715	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CNQ40_RS09720	COG2706	6-phosphogluconolactonase activity
CNQ40_RS09730	COG3069	C4-dicarboxylate transmembrane transporter activity
CNQ40_RS09760	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CNQ40_RS09770	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CNQ40_RS09810	COG2364	Membrane
CNQ40_RS09815	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ40_RS09825	COG2814	Major facilitator Superfamily
CNQ40_RS09830	COG1368	sulfuric ester hydrolase activity
CNQ40_RS09865	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS09870	COG3715	PTS system
CNQ40_RS09885	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CNQ40_RS09885	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CNQ40_RS09895	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CNQ40_RS09920	COG0149	triose-phosphate isomerase activity
CNQ40_RS09925	COG0126	phosphoglycerate kinase activity
CNQ40_RS09935	COG2390	Transcriptional regulator
CNQ40_RS09940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CNQ40_RS09945	COG4475	Protein of unknown function (DUF436)
CNQ40_RS09950	COG4720	Psort location CytoplasmicMembrane, score
CNQ40_RS09955	COG0351	phosphomethylpyrimidine kinase
CNQ40_RS09960	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CNQ40_RS09965	COG0124	histidyl-tRNA synthetase
CNQ40_RS09975	COG1490	D-aminoacyl-tRNA deacylase activity
CNQ40_RS09980	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CNQ40_RS09990	COG2264	protein methyltransferase activity
CNQ40_RS10000	COG2094	Belongs to the DNA glycosylase MPG family
CNQ40_RS10005	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CNQ40_RS10030	COG0589	response to stress
CNQ40_RS10035	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CNQ40_RS10040	COG0827	DNA restriction-modification system
CNQ40_RS10065	COG4537	Required for transformation and DNA binding
CNQ40_RS10075	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CNQ40_RS10080	COG0531	amino acid
CNQ40_RS10090	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CNQ40_RS10095	COG0577	efflux transmembrane transporter activity
CNQ40_RS10100	COG1136	(ABC) transporter
CNQ40_RS10110	COG1674	ftsk spoiiie
CNQ40_RS10120	COG1252	NADH dehydrogenase
CNQ40_RS10135	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CNQ40_RS10140	COG4988	ABC transporter
CNQ40_RS10145	COG1294	oxidase, subunit
CNQ40_RS10150	COG1271	oxidase subunit
CNQ40_RS10160	COG3708	Transcriptional regulator
CNQ40_RS10160	COG2207	Transcriptional regulator
CNQ40_RS10180	COG1881	PFAM PEBP family protein
CNQ40_RS10185	COG2814	Major facilitator Superfamily
CNQ40_RS10195	COG0482	sulfurtransferase activity
CNQ40_RS10205	COG1104	cysteine desulfurase activity
CNQ40_RS10210	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CNQ40_RS10215	COG1121	(ABC) transporter
CNQ40_RS10220	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ40_RS10230	COG0488	(ABC) transporter
CNQ40_RS10240	COG1473	amidohydrolase
CNQ40_RS10250	COG2011	ABC-type metal ion transport system permease component
CNQ40_RS10255	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CNQ40_RS10500	COG3935	DnaD domain protein
CNQ40_RS10505	COG3723	Recombinational DNA repair protein, rece pathway
CNQ40_RS10510	COG5377	YqaJ viral recombinase family
CNQ40_RS10555	COG3620	sequence-specific DNA binding
CNQ40_RS10600	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CNQ40_RS10610	COG1122	ATPase activity
CNQ40_RS10615	COG4720	Psort location CytoplasmicMembrane, score
CNQ40_RS10620	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CNQ40_RS10630	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CNQ40_RS10650	COG0789	Transcriptional regulator
CNQ40_RS10655	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CNQ40_RS10660	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CNQ40_RS10665	COG0584	glycerophosphoryl diester phosphodiesterase
CNQ40_RS10670	COG0463	Glycosyl transferase, family 2
CNQ40_RS10685	COG1215	transferase activity, transferring glycosyl groups
CNQ40_RS10690	COG3475	LICD family
CNQ40_RS10700	COG1216	Glycosyl transferase, family 2
CNQ40_RS10700	COG1442	glycosyl transferase family 8
CNQ40_RS10705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CNQ40_RS10720	COG3475	LICD family
CNQ40_RS10730	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CNQ40_RS10745	COG1216	Glycosyl transferase, family 2
CNQ40_RS10745	COG0438	transferase activity, transferring glycosyl groups
CNQ40_RS10750	COG1216	Glycosyl transferase, family 2
CNQ40_RS10750	COG0438	transferase activity, transferring glycosyl groups
CNQ40_RS10755	COG1134	teichoic acid transport
CNQ40_RS10760	COG1682	transport, permease protein
CNQ40_RS10775	COG1215	transferase activity, transferring glycosyl groups
CNQ40_RS10780	COG1091	dTDP-4-dehydrorhamnose reductase activity
CNQ40_RS10785	COG1088	dTDP-glucose 4,6-dehydratase activity
CNQ40_RS10795	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CNQ40_RS10815	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CNQ40_RS10820	COG1295	ribonuclease BN
CNQ40_RS10825	COG0024	Methionine aminopeptidase
CNQ40_RS10830	COG0716	FMN binding
CNQ40_RS10835	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
CNQ40_RS10840	COG1309	transcriptional regulator
CNQ40_RS10845	COG2309	aminopeptidase activity
CNQ40_RS10860	COG0590	tRNA wobble adenosine to inosine editing
CNQ40_RS10870	COG0384	phenazine biosynthesis protein PhzF
CNQ40_RS10880	COG2738	Putative neutral zinc metallopeptidase
CNQ40_RS10895	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS10895	COG1263	PTS System
CNQ40_RS10900	COG0346	lactoylglutathione lyase activity
CNQ40_RS10920	COG4753	response regulator
CNQ40_RS10920	COG2207	Transcriptional regulator
CNQ40_RS10925	COG2972	Histidine kinase
CNQ40_RS10935	COG1653	transport
CNQ40_RS10940	COG0395	ABC-type sugar transport system, permease component
CNQ40_RS10945	COG1175	transmembrane transport
CNQ40_RS10970	COG1132	(ABC) transporter
CNQ40_RS10995	COG0395	ABC-type sugar transport system, permease component
CNQ40_RS11000	COG1175	transmembrane transport
CNQ40_RS11010	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CNQ40_RS11025	COG1609	Transcriptional regulator
CNQ40_RS11040	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CNQ40_RS11045	COG1082	Xylose isomerase domain protein TIM barrel
CNQ40_RS11050	COG0673	inositol 2-dehydrogenase activity
CNQ40_RS11060	COG1012	belongs to the aldehyde dehydrogenase family
CNQ40_RS11065	COG3718	enzyme involved in inositol metabolism
CNQ40_RS11070	COG3962	Belongs to the TPP enzyme family
CNQ40_RS11075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ40_RS11080	COG1609	Transcriptional regulator
CNQ40_RS11085	COG0481	GTPase activity
CNQ40_RS11120	COG0542	response to heat
CNQ40_RS11130	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CNQ40_RS11135	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CNQ40_RS11150	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CNQ40_RS11160	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS11180	COG0017	Asparaginyl-tRNA synthetase
CNQ40_RS11185	COG0436	Aminotransferase
CNQ40_RS11195	COG1199	ATP-dependent helicase activity
CNQ40_RS11195	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CNQ40_RS11205	COG0531	amino acid
CNQ40_RS11215	COG0442	prolyl-tRNA aminoacylation
CNQ40_RS11220	COG0750	zinc metalloprotease
CNQ40_RS11225	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS11285	COG0149	triose-phosphate isomerase activity
CNQ40_RS11290	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CNQ40_RS11300	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS11305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS11310	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS11310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ40_RS11310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS11315	COG3711	transcriptional antiterminator
CNQ40_RS11345	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ40_RS11350	COG3775	system Galactitol-specific IIC component
CNQ40_RS11355	COG3414	Phosphotransferase system galactitol-specific IIB component
CNQ40_RS11360	COG2213	PTS system mannitol-specific
CNQ40_RS11360	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ40_RS11395	COG3711	transcriptional antiterminator
CNQ40_RS11400	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS11405	COG1263	PTS System
CNQ40_RS11405	COG2190	(PTS) system
CNQ40_RS11405	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS11470	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CNQ40_RS11475	COG0719	Fe-S assembly protein
CNQ40_RS11485	COG0233	cytoplasmic translational termination
CNQ40_RS11490	COG0528	UMP kinase activity
CNQ40_RS11495	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CNQ40_RS11500	COG0052	Belongs to the universal ribosomal protein uS2 family
CNQ40_RS11510	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CNQ40_RS11515	COG1254	Belongs to the acylphosphatase family
CNQ40_RS11525	COG0706	membrane insertase activity
CNQ40_RS11535	COG0751	glycine-tRNA ligase activity
CNQ40_RS11540	COG0752	glycyl-tRNA synthetase alpha subunit
CNQ40_RS11555	COG1381	Involved in DNA repair and RecF pathway recombination
CNQ40_RS11560	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CNQ40_RS11565	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CNQ40_RS11570	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CNQ40_RS11580	COG1702	phosphate starvation-inducible protein PhoH
CNQ40_RS11585	COG1610	YqeY-like protein
CNQ40_RS11590	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CNQ40_RS11595	COG0735	belongs to the Fur family
CNQ40_RS11600	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CNQ40_RS11605	COG0083	homoserine kinase activity
CNQ40_RS11615	COG0460	homoserine dehydrogenase
CNQ40_RS11620	COG0640	Transcriptional regulator
CNQ40_RS11625	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CNQ40_RS11630	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CNQ40_RS11635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CNQ40_RS11650	COG0516	GMP reductase activity
CNQ40_RS11660	COG0402	S-adenosylhomocysteine deaminase activity
CNQ40_RS11675	COG1737	Transcriptional regulator
CNQ40_RS11680	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS11680	COG1263	PTS System
CNQ40_RS11685	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CNQ40_RS11700	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS11700	COG2190	(PTS) system
CNQ40_RS11700	COG1263	PTS System
CNQ40_RS11705	COG1968	undecaprenyl-diphosphatase activity
CNQ40_RS11710	COG3394	polysaccharide catabolic process
CNQ40_RS11720	COG0306	phosphate transporter
CNQ40_RS11730	COG0268	Binds directly to 16S ribosomal RNA
CNQ40_RS11735	COG1607	acyl-coa hydrolase
CNQ40_RS11740	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CNQ40_RS11745	COG1466	dna polymerase III delta subunit
CNQ40_RS11750	COG2333	competence protein COMEC
CNQ40_RS11750	COG0658	competence protein
CNQ40_RS11755	COG2131	deaminase
CNQ40_RS11760	COG1555	photosystem II stabilization
CNQ40_RS11765	COG3480	Lon protease (S16) C-terminal proteolytic domain
CNQ40_RS11770	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CNQ40_RS11775	COG0742	ribosomal rna small subunit methyltransferase
CNQ40_RS11780	COG4471	UPF0298 protein
CNQ40_RS11795	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CNQ40_RS11800	COG0772	Belongs to the SEDS family
CNQ40_RS11805	COG4838	Belongs to the UPF0358 family
CNQ40_RS11810	COG0514	ATP-dependent DNA helicase (RecQ)
CNQ40_RS11815	COG1217	gtp-binding protein TYPA
CNQ40_RS11820	COG0483	inositol monophosphate 1-phosphatase activity
CNQ40_RS11825	COG4476	Belongs to the UPF0223 family
CNQ40_RS11830	COG0038	chloride channel
CNQ40_RS11870	COG0018	arginyl-trna synthetase
CNQ40_RS11875	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CNQ40_RS11880	COG0456	acetyltransferase
CNQ40_RS11890	COG1214	PFAM Peptidase M22, glycoprotease
CNQ40_RS11920	COG0546	phosphoglycolate phosphatase activity
CNQ40_RS11935	COG1682	transport, permease protein
CNQ40_RS11940	COG1134	teichoic acid transport
CNQ40_RS11940	COG1388	LysM domain
CNQ40_RS11945	COG0562	UDP-galactopyranose mutase
CNQ40_RS11960	COG1216	Glycosyl transferase, family 2
CNQ40_RS11965	COG1215	transferase activity, transferring glycosyl groups
CNQ40_RS11965	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CNQ40_RS11970	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CNQ40_RS11975	COG4589	Belongs to the CDS family
CNQ40_RS11980	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CNQ40_RS11985	COG1464	Belongs to the NlpA lipoprotein family
CNQ40_RS11990	COG2011	ABC-type metal ion transport system permease component
CNQ40_RS11995	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CNQ40_RS12010	COG0509	glycine decarboxylation via glycine cleavage system
CNQ40_RS12015	COG1393	Belongs to the ArsC family
CNQ40_RS12020	COG0772	Belongs to the SEDS family
CNQ40_RS12045	COG1396	sequence-specific DNA binding
CNQ40_RS12095	COG3299	homolog of phage Mu protein gp47
CNQ40_RS12100	COG3628	GPW Gp25 family protein
CNQ40_RS12365	COG3561	AntA/AntB antirepressor
CNQ40_RS12375	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CNQ40_RS12380	COG0582	viral genome integration into host DNA
CNQ40_RS12405	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CNQ40_RS12410	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CNQ40_RS12415	COG0009	L-threonylcarbamoyladenylate synthase
CNQ40_RS12420	COG2890	protein-(glutamine-N5) methyltransferase activity
CNQ40_RS12425	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CNQ40_RS12430	COG1435	thymidine kinase activity
CNQ40_RS12435	COG1053	succinate dehydrogenase
CNQ40_RS12440	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CNQ40_RS12450	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ40_RS12450	COG0493	'glutamate synthase
CNQ40_RS12455	COG0543	2 iron, 2 sulfur cluster binding
CNQ40_RS12460	COG0716	FMN binding
CNQ40_RS12465	COG3608	succinylglutamate desuccinylase aspartoacylase
CNQ40_RS12465	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CNQ40_RS12470	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CNQ40_RS12490	COG1104	cysteine desulfurase activity
CNQ40_RS12495	COG0746	molybdenum cofactor guanylyltransferase activity
CNQ40_RS12505	COG3608	succinylglutamate desuccinylase aspartoacylase
CNQ40_RS12505	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CNQ40_RS12520	COG0251	oxidation-reduction process
CNQ40_RS12525	COG0549	Belongs to the carbamate kinase family
CNQ40_RS12535	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ40_RS12540	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CNQ40_RS12555	COG0493	'glutamate synthase
CNQ40_RS12555	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ40_RS12560	COG0402	S-adenosylhomocysteine deaminase activity
CNQ40_RS12570	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CNQ40_RS12575	COG3442	glutamine amidotransferase
CNQ40_RS12580	COG1957	nucleoside hydrolase
CNQ40_RS12590	COG1482	cell wall glycoprotein biosynthetic process
CNQ40_RS12605	COG1132	(ABC) transporter
CNQ40_RS12620	COG0194	GDP metabolic process
CNQ40_RS12625	COG2723	6-phospho-beta-galactosidase activity
CNQ40_RS12630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS12630	COG2190	(PTS) system
CNQ40_RS12630	COG1263	PTS System
CNQ40_RS12635	COG3711	transcriptional antiterminator
CNQ40_RS12645	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CNQ40_RS12650	COG0628	permease
CNQ40_RS12665	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CNQ40_RS12670	COG4836	Membrane
CNQ40_RS12675	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CNQ40_RS12680	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CNQ40_RS12685	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CNQ40_RS12690	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CNQ40_RS12695	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CNQ40_RS12700	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CNQ40_RS12705	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CNQ40_RS12710	COG0356	it plays a direct role in the translocation of protons across the membrane
CNQ40_RS12720	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CNQ40_RS12725	COG0557	exoribonuclease II activity
CNQ40_RS12740	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CNQ40_RS12745	COG2388	GCN5-related N-acetyl-transferase
CNQ40_RS12750	COG3592	Divergent 4Fe-4S mono-cluster
CNQ40_RS12765	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CNQ40_RS12770	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CNQ40_RS12775	COG2246	polysaccharide biosynthetic process
CNQ40_RS12780	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ40_RS12780	COG3942	CHAP domain
CNQ40_RS12795	COG0459	protein refolding
CNQ40_RS12800	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CNQ40_RS12815	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CNQ40_RS12820	COG0488	(ABC) transporter
CNQ40_RS12830	COG4175	Glycine betaine
CNQ40_RS12830	COG3448	diguanylate cyclase activity
CNQ40_RS12845	COG1597	lipid kinase activity
CNQ40_RS12850	COG3835	regulator
CNQ40_RS12855	COG1929	Belongs to the glycerate kinase type-1 family
CNQ40_RS12860	COG2610	gluconate transmembrane transporter activity
CNQ40_RS12865	COG0398	Pfam SNARE associated Golgi protein
CNQ40_RS12885	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CNQ40_RS12890	COG1177	transmembrane transport
CNQ40_RS12895	COG1176	ABC-type spermidine putrescine transport system, permease component I
CNQ40_RS12900	COG3842	ATPase activity
CNQ40_RS12910	COG0604	alcohol dehydrogenase
CNQ40_RS12920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CNQ40_RS12925	COG4684	Psort location CytoplasmicMembrane, score
CNQ40_RS12930	COG2348	transferase activity, transferring amino-acyl groups
CNQ40_RS12945	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CNQ40_RS12955	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CNQ40_RS12970	COG3142	Participates in the control of copper homeostasis
CNQ40_RS12975	COG2239	Acts as a magnesium transporter
CNQ40_RS12980	COG0564	pseudouridine synthase activity
CNQ40_RS12985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CNQ40_RS12990	COG2357	RelA SpoT domain protein
CNQ40_RS12995	COG4116	CYTH
CNQ40_RS13005	COG1164	Oligoendopeptidase f
CNQ40_RS13015	COG4862	establishment of competence for transformation
CNQ40_RS13020	COG1393	Belongs to the ArsC family
CNQ40_RS13025	COG0180	Tryptophanyl-tRNA synthetase
CNQ40_RS13030	COG1132	(ABC) transporter
CNQ40_RS13075	COG0419	ATPase involved in DNA repair
CNQ40_RS13080	COG0420	3'-5' exonuclease activity
CNQ40_RS13085	COG0204	Acyl-transferase
CNQ40_RS13090	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CNQ40_RS13095	COG2827	Endonuclease containing a URI domain
CNQ40_RS13100	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CNQ40_RS13110	COG0494	nUDIX hydrolase
CNQ40_RS13120	COG3853	Toxic anion resistance protein (TelA)
CNQ40_RS13150	COG1194	a g-specific adenine glycosylase
CNQ40_RS13155	COG2137	regulation of response to DNA damage stimulus
CNQ40_RS13160	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CNQ40_RS13170	COG2261	transglycosylase associated protein
CNQ40_RS13175	COG3250	beta-galactosidase activity
CNQ40_RS13180	COG0531	amino acid
CNQ40_RS13185	COG1917	Cupin 2, conserved barrel domain protein
CNQ40_RS13185	COG2207	Transcriptional regulator
CNQ40_RS13200	COG0222	ribosome binding
CNQ40_RS13205	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CNQ40_RS13210	COG0081	regulation of translation
CNQ40_RS13215	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CNQ40_RS13220	COG0488	(ABC) transporter
CNQ40_RS13225	COG1760	l-serine dehydratase
CNQ40_RS13230	COG1760	l-serine dehydratase
CNQ40_RS13240	COG1363	Peptidase, m42
CNQ40_RS13245	COG4166	transmembrane transport
CNQ40_RS13260	COG0250	Participates in transcription elongation, termination and antitermination
CNQ40_RS13265	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CNQ40_RS13270	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CNQ40_RS13285	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CNQ40_RS13295	COG0708	Exodeoxyribonuclease III
CNQ40_RS13330	COG0095	Lipoate-protein ligase
CNQ40_RS13335	COG1234	tRNA 3'-trailer cleavage
CNQ40_RS13345	COG1363	Peptidase, m42
CNQ40_RS13350	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CNQ40_RS13355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CNQ40_RS13360	COG1696	Membrane protein involved in D-alanine export
CNQ40_RS13365	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CNQ40_RS13375	COG0577	efflux transmembrane transporter activity
CNQ40_RS13380	COG1136	(ABC) transporter
CNQ40_RS13385	COG1328	CTP reductase activity
CNQ40_RS13390	COG0602	queuosine metabolic process
CNQ40_RS13400	COG0390	transport system, permease component
CNQ40_RS13405	COG4619	ABC transporter
CNQ40_RS13415	COG4467	Involved in initiation control of chromosome replication
CNQ40_RS13420	COG1774	PSP1 C-terminal conserved region
CNQ40_RS13425	COG0470	DNA polymerase III
CNQ40_RS13430	COG3870	Protein conserved in bacteria
CNQ40_RS13435	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CNQ40_RS13445	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CNQ40_RS13450	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CNQ40_RS13460	COG1122	ATPase activity
CNQ40_RS13480	COG0477	Major facilitator Superfamily
CNQ40_RS13485	COG2814	Major facilitator Superfamily
CNQ40_RS13490	COG1733	regulation of RNA biosynthetic process
CNQ40_RS13495	COG0351	phosphomethylpyrimidine kinase
CNQ40_RS13500	COG0352	thiamine-phosphate diphosphorylase activity
CNQ40_RS13505	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CNQ40_RS13515	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CNQ40_RS13520	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CNQ40_RS13525	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
CNQ40_RS13530	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CNQ40_RS13545	COG3189	MarR family transcriptional regulator
CNQ40_RS13550	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CNQ40_RS13555	COG1940	carbohydrate kinase activity
CNQ40_RS13570	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CNQ40_RS13575	COG1073	alpha beta
CNQ40_RS13620	COG1388	LysM domain
CNQ40_RS13620	COG3942	CHAP domain
CNQ40_RS13780	COG0863	Belongs to the N(4) N(6)-methyltransferase family
CNQ40_RS13865	COG1396	sequence-specific DNA binding
CNQ40_RS13875	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ40_RS13885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CNQ40_RS13890	COG0768	penicillin binding
CNQ40_RS13895	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CNQ40_RS13900	COG1942	4-Oxalocrotonate Tautomerase
CNQ40_RS13930	COG0217	transcriptional regulatory protein
CNQ40_RS13935	COG1323	Belongs to the UPF0348 family
CNQ40_RS13940	COG2226	methyltransferase
CNQ40_RS13945	COG0799	negative regulation of ribosome biogenesis
CNQ40_RS13950	COG1713	HD superfamily hydrolase involved in NAD metabolism
CNQ40_RS13955	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CNQ40_RS13960	COG1534	Rna-binding protein
CNQ40_RS13965	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CNQ40_RS13975	COG0825	malonyl-CoA metabolic process
CNQ40_RS13980	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CNQ40_RS13985	COG0439	Biotin carboxylase
CNQ40_RS13990	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CNQ40_RS14000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ40_RS14010	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CNQ40_RS14025	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CNQ40_RS14030	COG1846	Transcriptional regulator
CNQ40_RS14035	COG4703	Protein of unknown function (DUF1797)
CNQ40_RS14040	COG2084	Dehydrogenase
CNQ40_RS14045	COG0438	transferase activity, transferring glycosyl groups
CNQ40_RS14100	COG1098	S1 RNA binding domain
CNQ40_RS14105	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CNQ40_RS14120	COG0492	ferredoxin-NADP+ reductase activity
CNQ40_RS14135	COG0737	Belongs to the 5'-nucleotidase family
CNQ40_RS14155	COG1175	transmembrane transport
CNQ40_RS14160	COG3842	ATPase activity
CNQ40_RS14165	COG0463	Glycosyl transferase, family 2
CNQ40_RS14170	COG4841	protein insertion into membrane
CNQ40_RS14175	COG0569	domain protein
CNQ40_RS14180	COG2197	response regulator
CNQ40_RS14185	COG4585	Histidine kinase
CNQ40_RS14195	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CNQ40_RS14200	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CNQ40_RS14210	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CNQ40_RS14215	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CNQ40_RS14235	COG2832	Protein of unknown function (DUF454)
CNQ40_RS14240	COG5503	Protein of unknown function (DUF1447)
CNQ40_RS14250	COG1278	Cold shock
CNQ40_RS14255	COG2003	Belongs to the UPF0758 family
CNQ40_RS14260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ40_RS14265	COG0285	dihydrofolate synthase activity
CNQ40_RS14280	COG0525	valine-tRNA ligase activity
CNQ40_RS14285	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CNQ40_RS14290	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CNQ40_RS14305	COG0301	tRNA thio-modification
CNQ40_RS14310	COG0582	viral genome integration into host DNA
CNQ40_RS14345	COG0433	COG0433 Predicted ATPase
CNQ40_RS14395	COG2946	Replication initiation factor
CNQ40_RS14415	COG1674	ftsk spoiiie
CNQ40_RS14470	COG1396	sequence-specific DNA binding
CNQ40_RS14480	COG1733	regulation of RNA biosynthetic process
CNQ40_RS14485	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ40_RS14490	COG0656	L-ascorbic acid biosynthetic process
CNQ40_RS14495	COG0789	Transcriptional regulator
CNQ40_RS14500	COG0588	phosphoglycerate mutase activity
CNQ40_RS14515	COG1278	Cold shock
CNQ40_RS14575	COG2252	PERMEase
CNQ40_RS14580	COG4221	oxidoreductase activity
CNQ40_RS14585	COG0110	maltose O-acetyltransferase activity
CNQ40_RS14590	COG0583	DNA-binding transcription factor activity
CNQ40_RS14595	COG4975	Glucose uptake
CNQ40_RS14600	COG1869	D-ribose catabolic process
CNQ40_RS14610	COG1609	Transcriptional regulator
CNQ40_RS14615	COG0657	acetylesterase activity
CNQ40_RS14630	COG3711	transcriptional antiterminator
CNQ40_RS14660	COG1834	amidinotransferase
CNQ40_RS14665	COG1785	Belongs to the alkaline phosphatase family
CNQ40_RS14670	COG1193	negative regulation of DNA recombination
CNQ40_RS14685	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS14690	COG3715	PTS system
CNQ40_RS14695	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS14725	COG0577	efflux transmembrane transporter activity
CNQ40_RS14730	COG1136	(ABC) transporter
CNQ40_RS14735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ40_RS14745	COG0446	pyridine nucleotide-disulphide oxidoreductase
CNQ40_RS14755	COG1937	Protein conserved in bacteria
CNQ40_RS14765	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CNQ40_RS14770	COG2508	Transcriptional regulator
CNQ40_RS14775	COG3257	ureidoglycine aminohydrolase activity
CNQ40_RS14780	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CNQ40_RS14785	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CNQ40_RS14790	COG1953	Uracil, thiamine, allantoin
CNQ40_RS14800	COG1846	Transcriptional regulator
CNQ40_RS14810	COG0659	secondary active sulfate transmembrane transporter activity
CNQ40_RS14815	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CNQ40_RS14830	COG0732	type I restriction modification DNA specificity domain
CNQ40_RS14860	COG2508	Transcriptional regulator
CNQ40_RS14870	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ40_RS14875	COG1304	FMN binding
CNQ40_RS14890	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CNQ40_RS14895	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CNQ40_RS14900	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CNQ40_RS14930	COG1823	symporter activity
CNQ40_RS14935	COG5492	domain, Protein
CNQ40_RS14945	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CNQ40_RS14950	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CNQ40_RS14955	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CNQ40_RS14965	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CNQ40_RS14970	COG1363	Peptidase, m42
CNQ40_RS14985	COG4166	transmembrane transport
CNQ40_RS14990	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS14995	COG3715	PTS system
CNQ40_RS15000	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CNQ40_RS15005	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS15020	COG3394	polysaccharide catabolic process
CNQ40_RS15030	COG0519	Catalyzes the synthesis of GMP from XMP
CNQ40_RS15060	COG3764	Sortase (surface protein transpeptidase)
CNQ40_RS15070	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CNQ40_RS15100	COG1185	polyribonucleotide nucleotidyltransferase activity
CNQ40_RS15105	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CNQ40_RS15110	COG0242	peptide deformylase activity
CNQ40_RS15130	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CNQ40_RS15140	COG1268	BioY protein
CNQ40_RS15175	COG4493	Belongs to the UPF0637 family
CNQ40_RS15185	COG2195	Cleaves the N-terminal amino acid of tripeptides
CNQ40_RS15190	COG4166	transmembrane transport
CNQ40_RS15200	COG4607	ABC-type enterochelin transport system periplasmic component
CNQ40_RS15205	COG4604	ABC transporter, ATP-binding protein
CNQ40_RS15210	COG4605	iron ion homeostasis
CNQ40_RS15215	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ40_RS15235	COG1181	Belongs to the D-alanine--D-alanine ligase family
CNQ40_RS15235	COG2918	glutathione biosynthetic process
CNQ40_RS15245	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CNQ40_RS15260	COG0552	protein localization to endoplasmic reticulum
CNQ40_RS15265	COG0561	phosphatase activity
CNQ40_RS15270	COG1196	nuclear chromosome segregation
CNQ40_RS15275	COG0571	ribonuclease III activity
CNQ40_RS15290	COG0601	transmembrane transport
CNQ40_RS15295	COG4608	Belongs to the ABC transporter superfamily
CNQ40_RS15305	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CNQ40_RS15310	COG0416	fatty acid biosynthetic process
CNQ40_RS15315	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CNQ40_RS15320	COG1461	Dihydroxyacetone kinase
CNQ40_RS15330	COG3279	Response regulator of the LytR AlgR family
CNQ40_RS15340	COG1668	transmembrane transport
CNQ40_RS15345	COG4152	abc transporter atp-binding protein
CNQ40_RS15350	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ40_RS15360	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CNQ40_RS15375	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CNQ40_RS15385	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CNQ40_RS15390	COG1162	GTPase activity
CNQ40_RS15395	COG2815	serine threonine protein kinase
CNQ40_RS15395	COG0515	serine threonine protein kinase
CNQ40_RS15405	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CNQ40_RS15405	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CNQ40_RS15410	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CNQ40_RS15420	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CNQ40_RS15425	COG1758	RNA polymerase activity
CNQ40_RS15430	COG0194	GDP metabolic process
CNQ40_RS15460	COG0800	Aldolase
CNQ40_RS15465	COG1312	Catalyzes the dehydration of D-mannonate
CNQ40_RS15475	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ40_RS15480	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS15490	COG0371	Dehydrogenase
CNQ40_RS15500	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CNQ40_RS15510	COG1737	Transcriptional regulator
CNQ40_RS15520	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CNQ40_RS15530	COG1426	Protein conserved in bacteria
CNQ40_RS15535	COG0612	Peptidase, M16
CNQ40_RS15540	COG0612	Peptidase, M16
CNQ40_RS15545	COG1970	mechanosensitive ion channel activity
CNQ40_RS15555	COG2188	Transcriptional regulator
CNQ40_RS15560	COG1554	hydrolase, family 65, central catalytic
CNQ40_RS15565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ40_RS15575	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CNQ40_RS15585	COG0424	maF-like protein
CNQ40_RS15590	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CNQ40_RS15595	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CNQ40_RS15600	COG4550	Control of competence regulator ComK, YlbF/YmcA
CNQ40_RS15605	COG1692	metallophosphoesterase
CNQ40_RS15610	COG1418	mRNA catabolic process
CNQ40_RS15620	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CNQ40_RS15625	COG1058	Belongs to the CinA family
CNQ40_RS15625	COG1546	Belongs to the CinA family
CNQ40_RS15635	COG2910	NAD(P)H-binding
CNQ40_RS15640	COG1959	2 iron, 2 sulfur cluster binding
CNQ40_RS15655	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CNQ40_RS15725	COG1335	isochorismatase
CNQ40_RS15730	COG1346	cytolysis
CNQ40_RS15740	COG3279	Response regulator of the LytR AlgR family
CNQ40_RS15745	COG3275	phosphorelay sensor kinase activity
CNQ40_RS15755	COG2011	ABC-type metal ion transport system permease component
CNQ40_RS15770	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CNQ40_RS15775	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CNQ40_RS15790	COG0803	Belongs to the bacterial solute-binding protein 9 family
CNQ40_RS15790	COG3443	Belongs to the bacterial solute-binding protein 9 family
CNQ40_RS15795	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CNQ40_RS15800	COG0842	Transport permease protein
CNQ40_RS15805	COG1131	(ABC) transporter
CNQ40_RS15820	COG3715	PTS system
CNQ40_RS15825	COG3716	PTS system mannose fructose sorbose family IID component
CNQ40_RS15855	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CNQ40_RS15860	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CNQ40_RS15870	COG0783	Belongs to the Dps family
CNQ40_RS15880	COG1070	Carbohydrate kinase
CNQ40_RS15885	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CNQ40_RS15890	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CNQ40_RS15895	COG0085	RNA polymerase activity
CNQ40_RS15925	COG3397	chitin binding
CNQ40_RS15935	COG1316	TRANSCRIPTIONal
CNQ40_RS15965	COG1575	Belongs to the MenA family. Type 1 subfamily
CNQ40_RS15975	COG4939	FMN-binding domain protein
CNQ40_RS15995	COG0142	geranyltranstransferase activity
CNQ40_RS16015	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CNQ40_RS16020	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CNQ40_RS16025	COG0302	gtp cyclohydrolase
CNQ40_RS16035	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CNQ40_RS16050	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CNQ40_RS16055	COG2946	Replication initiation factor
CNQ40_RS16085	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ40_RS16115	COG2508	Transcriptional regulator
CNQ40_RS16115	COG2508	Transcriptional regulator
CNQ40_RS16120	COG0826	peptidase U32
CNQ40_RS16125	COG0826	peptidase U32
CNQ40_RS16135	COG0542	response to heat
CNQ40_RS16140	COG4463	regulation of RNA biosynthetic process
CNQ40_RS16145	COG0626	cystathionine gamma-synthase activity
CNQ40_RS16150	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ40_RS16155	COG1737	Transcriptional regulator
CNQ40_RS16225	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS16235	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CNQ40_RS16240	COG0517	IMP dehydrogenase activity
CNQ40_RS16240	COG0516	GMP reductase activity
CNQ40_RS16255	COG0012	GTP binding
CNQ40_RS16260	COG4481	Protein conserved in bacteria
CNQ40_RS16265	COG1475	DNA binding
CNQ40_RS16270	COG1192	Involved in chromosome partitioning
CNQ40_RS16275	COG0357	Ribosomal RNA small subunit methyltransferase G
CNQ40_RS16315	COG3732	PTS system glucitol sorbitol-specific
CNQ40_RS16320	COG3730	PTS system glucitol sorbitol-specific
CNQ40_RS16340	COG0445	tRNA wobble uridine modification
CNQ40_RS16345	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CNQ40_RS16360	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
CNQ40_RS16390	COG3052	prosthetic group binding
CNQ40_RS16395	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CNQ40_RS16405	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
CNQ40_RS16410	COG0511	ligase activity, forming carbon-carbon bonds
CNQ40_RS16420	COG2851	Citrate transporter
CNQ40_RS16430	COG0745	RESPONSE REGULATOR receiver
CNQ40_RS16470	COG0706	membrane insertase activity
CNQ40_RS16475	COG0594	ribonuclease P activity
CNQ40_RS16480	COG0230	Belongs to the bacterial ribosomal protein bL34 family