locus-tag	class	description
FOA09_RS00010	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FOA09_RS00025	COG3697	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
FOA09_RS00025	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FOA09_RS00040	COG3052	prosthetic group binding
FOA09_RS00045	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FOA09_RS00050	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FOA09_RS00055	COG0511	ligase activity, forming carbon-carbon bonds
FOA09_RS00065	COG2851	Citrate transporter
FOA09_RS00075	COG0745	RESPONSE REGULATOR receiver
FOA09_RS00085	COG0706	membrane insertase activity
FOA09_RS00090	COG0594	ribonuclease P activity
FOA09_RS00095	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOA09_RS00100	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FOA09_RS00105	COG0592	DNA-directed DNA polymerase activity
FOA09_RS00110	COG2501	S4 domain
FOA09_RS00115	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FOA09_RS00120	COG0187	DNA topoisomerase II activity
FOA09_RS00130	COG0360	Binds together with S18 to 16S ribosomal RNA
FOA09_RS00135	COG0629	single-stranded DNA binding
FOA09_RS00140	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOA09_RS00150	COG0359	binds to the 23S rRNA
FOA09_RS00155	COG0305	Participates in initiation and elongation during chromosome replication
FOA09_RS00160	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FOA09_RS00170	COG0488	(ABC) transporter
FOA09_RS00175	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOA09_RS00175	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOA09_RS00180	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS00180	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS00190	COG3715	PTS system
FOA09_RS00195	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS00215	COG1737	Transcriptional regulator
FOA09_RS00220	COG1263	PTS System
FOA09_RS00220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS00225	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOA09_RS00230	COG0251	oxidation-reduction process
FOA09_RS00235	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOA09_RS00235	COG0392	lysyltransferase activity
FOA09_RS00260	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOA09_RS00265	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOA09_RS00270	COG0756	dUTP diphosphatase activity
FOA09_RS00280	COG4956	integral membrane protein (PIN domain superfamily)
FOA09_RS00285	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FOA09_RS00290	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOA09_RS00295	COG1045	serine acetyltransferase
FOA09_RS00300	COG0215	cysteine-tRNA ligase activity
FOA09_RS00305	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
FOA09_RS00310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOA09_RS00315	COG3688	RNA-binding protein containing a PIN domain
FOA09_RS00325	COG4466	Protein conserved in bacteria
FOA09_RS00330	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOA09_RS00335	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOA09_RS00335	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOA09_RS00340	COG1121	(ABC) transporter
FOA09_RS00345	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOA09_RS00350	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOA09_RS00355	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOA09_RS00360	COG0737	Belongs to the 5'-nucleotidase family
FOA09_RS00365	COG4166	transmembrane transport
FOA09_RS00370	COG4224	UPF0291 protein
FOA09_RS00375	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOA09_RS00380	COG0632	four-way junction helicase activity
FOA09_RS00385	COG2255	four-way junction helicase activity
FOA09_RS00390	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
FOA09_RS00395	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FOA09_RS00395	COG3408	Glycogen debranching enzyme
FOA09_RS00405	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOA09_RS00410	COG1028	Short-chain dehydrogenase reductase Sdr
FOA09_RS00435	COG2261	transglycosylase associated protein
FOA09_RS00440	COG2814	Major facilitator Superfamily
FOA09_RS00465	COG1597	lipid kinase activity
FOA09_RS00485	COG2116	formate transmembrane transporter activity
FOA09_RS00495	COG2964	Protein conserved in bacteria
FOA09_RS00505	COG1760	l-serine dehydratase
FOA09_RS00510	COG1760	l-serine dehydratase
FOA09_RS00515	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOA09_RS00525	COG1438	arginine binding
FOA09_RS00530	COG1438	arginine binding
FOA09_RS00535	COG2235	arginine
FOA09_RS00540	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOA09_RS00545	COG0549	Belongs to the carbamate kinase family
FOA09_RS00555	COG1288	antiporter activity
FOA09_RS00565	COG0640	Transcriptional regulator
FOA09_RS00570	COG0604	alcohol dehydrogenase
FOA09_RS00580	COG0251	oxidation-reduction process
FOA09_RS00615	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOA09_RS00635	COG0519	Catalyzes the synthesis of GMP from XMP
FOA09_RS00635	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOA09_RS00640	COG1072	(Pantothenic acid kinase))
FOA09_RS00650	COG2813	Specifically methylates the guanine in position
FOA09_RS00655	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FOA09_RS00660	COG1609	Transcriptional regulator
FOA09_RS00665	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FOA09_RS00670	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FOA09_RS00675	COG0295	cytidine deaminase activity
FOA09_RS00680	COG1744	ABC transporter substrate-binding protein PnrA-like
FOA09_RS00685	COG1744	ABC transporter substrate-binding protein PnrA-like
FOA09_RS00690	COG3845	ABC transporter
FOA09_RS00695	COG4603	Belongs to the binding-protein-dependent transport system permease family
FOA09_RS00700	COG1079	Belongs to the binding-protein-dependent transport system permease family
FOA09_RS00710	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FOA09_RS00725	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOA09_RS00730	COG1120	ATPase activity
FOA09_RS00735	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOA09_RS00740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOA09_RS00745	COG1979	alcohol dehydrogenase
FOA09_RS00750	COG0588	phosphoglycerate mutase activity
FOA09_RS00755	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FOA09_RS00760	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FOA09_RS00765	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOA09_RS00770	COG0049	tRNA binding
FOA09_RS00775	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOA09_RS00780	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOA09_RS00785	COG0351	phosphomethylpyrimidine kinase
FOA09_RS00790	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOA09_RS00795	COG0051	transcription antitermination factor activity, RNA binding
FOA09_RS00800	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOA09_RS00805	COG0088	Forms part of the polypeptide exit tunnel
FOA09_RS00810	COG0089	rRNA binding
FOA09_RS00815	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FOA09_RS00820	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FOA09_RS00825	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FOA09_RS00830	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FOA09_RS00835	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOA09_RS00840	COG0255	Belongs to the universal ribosomal protein uL29 family
FOA09_RS00845	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FOA09_RS00850	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FOA09_RS00855	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FOA09_RS00860	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FOA09_RS00865	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOA09_RS00870	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOA09_RS00875	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOA09_RS00880	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FOA09_RS00885	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FOA09_RS00890	COG1841	ribosomal large subunit assembly
FOA09_RS00895	COG0200	Binds to the 23S rRNA
FOA09_RS00900	COG0201	protein transport
FOA09_RS00905	COG0563	adenylate kinase activity
FOA09_RS00910	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOA09_RS00915	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOA09_RS00920	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FOA09_RS00925	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOA09_RS00930	COG0202	RNA polymerase activity
FOA09_RS00935	COG0203	ribosomal protein L17
FOA09_RS00945	COG1473	amidohydrolase
FOA09_RS00950	COG1122	ATPase activity
FOA09_RS00955	COG1122	ATPase activity
FOA09_RS00970	COG0393	Putative heavy-metal-binding
FOA09_RS00975	COG1114	Component of the transport system for branched-chain amino acids
FOA09_RS00990	COG1126	abc transporter atp-binding protein
FOA09_RS00995	COG0765	amino acid transport
FOA09_RS01005	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOA09_RS01010	COG0110	maltose O-acetyltransferase activity
FOA09_RS01015	COG1827	regulation of RNA biosynthetic process
FOA09_RS01020	COG3942	CHAP domain
FOA09_RS01020	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS01030	COG0039	L-malate dehydrogenase activity
FOA09_RS01035	COG0193	aminoacyl-tRNA hydrolase activity
FOA09_RS01040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOA09_RS01045	COG2244	polysaccharide biosynthetic process
FOA09_RS01050	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FOA09_RS01060	COG1098	S1 RNA binding domain
FOA09_RS01065	COG0037	tRNA processing
FOA09_RS01070	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FOA09_RS01075	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOA09_RS01080	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOA09_RS01085	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOA09_RS01090	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOA09_RS01235	COG3711	transcriptional antiterminator
FOA09_RS01240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS01240	COG2190	(PTS) system
FOA09_RS01240	COG1263	PTS System
FOA09_RS01245	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS01250	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS01270	COG2169	Transcriptional regulator
FOA09_RS01275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOA09_RS01280	COG0519	Catalyzes the synthesis of GMP from XMP
FOA09_RS01285	COG1418	mRNA catabolic process
FOA09_RS01300	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOA09_RS01305	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOA09_RS01310	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOA09_RS01315	COG0167	dihydroorotate dehydrogenase activity
FOA09_RS01325	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOA09_RS01335	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOA09_RS01340	COG0626	cystathionine gamma-synthase activity
FOA09_RS01345	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS01350	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS01360	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FOA09_RS01365	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOA09_RS01380	COG2217	Heavy metal translocating P-type atpase
FOA09_RS01395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOA09_RS01400	COG3579	cysteine-type endopeptidase activity
FOA09_RS01405	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOA09_RS01410	COG0346	lactoylglutathione lyase activity
FOA09_RS01415	COG2076	Multidrug Resistance protein
FOA09_RS01420	COG2076	Multidrug Resistance protein
FOA09_RS01425	COG3469	chitinase activity
FOA09_RS01430	COG3397	chitin binding
FOA09_RS01440	COG1801	Protein of unknown function DUF72
FOA09_RS01450	COG0527	aspartate kinase activity
FOA09_RS01455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOA09_RS01460	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
FOA09_RS01465	COG1104	cysteine desulfurase activity
FOA09_RS01470	COG0745	RESPONSE REGULATOR receiver
FOA09_RS01475	COG5002	protein histidine kinase activity
FOA09_RS01495	COG0666	response to abiotic stimulus
FOA09_RS01510	COG3835	regulator
FOA09_RS01515	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOA09_RS01530	COG0549	Belongs to the carbamate kinase family
FOA09_RS01540	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOA09_RS01565	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FOA09_RS01570	COG0628	permease
FOA09_RS01590	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FOA09_RS01595	COG1757	Na H antiporter
FOA09_RS01600	COG1846	Transcriptional regulator
FOA09_RS01605	COG0778	Nitroreductase
FOA09_RS01610	COG0561	phosphatase activity
FOA09_RS01620	COG3711	transcriptional antiterminator
FOA09_RS01625	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS01635	COG2213	PTS system mannitol-specific
FOA09_RS01640	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS01645	COG0246	Mannitol dehydrogenase
FOA09_RS01650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOA09_RS01665	COG1136	(ABC) transporter
FOA09_RS01665	COG0577	efflux transmembrane transporter activity
FOA09_RS01670	COG0577	efflux transmembrane transporter activity
FOA09_RS01690	COG2814	Major facilitator Superfamily
FOA09_RS01700	COG1414	Transcriptional regulator
FOA09_RS01715	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FOA09_RS01720	COG1028	Short-chain dehydrogenase reductase Sdr
FOA09_RS01725	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FOA09_RS01750	COG1070	Carbohydrate kinase
FOA09_RS01755	COG4806	L-rhamnose isomerase
FOA09_RS01760	COG0235	Class ii aldolase
FOA09_RS01765	COG3254	rhamnose metabolic process
FOA09_RS01785	COG3104	oligopeptide transport
FOA09_RS01790	COG1388	LysM domain
FOA09_RS01790	COG3942	CHAP domain
FOA09_RS01800	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOA09_RS01805	COG0318	PFAM AMP-dependent synthetase and ligase
FOA09_RS01810	COG1169	isochorismate synthase
FOA09_RS01815	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FOA09_RS01820	COG2267	carboxylic ester hydrolase activity
FOA09_RS01825	COG4948	Mandelate Racemase Muconate Lactonizing
FOA09_RS01830	COG0363	glucosamine-6-phosphate deaminase activity
FOA09_RS01835	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOA09_RS01840	COG1764	response to oxidative stress
FOA09_RS01855	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS01860	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS01870	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FOA09_RS01875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOA09_RS01890	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOA09_RS01895	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FOA09_RS01900	COG1316	TRANSCRIPTIONal
FOA09_RS01905	COG0363	glucosamine-6-phosphate deaminase activity
FOA09_RS01910	COG1285	pathogenesis
FOA09_RS01930	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FOA09_RS01935	COG1780	Probably involved in ribonucleotide reductase function
FOA09_RS01940	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOA09_RS01965	COG0656	L-ascorbic acid biosynthetic process
FOA09_RS01975	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOA09_RS01990	COG1113	amino acid transport
FOA09_RS01995	COG1757	Na H antiporter
FOA09_RS02010	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FOA09_RS02015	COG0039	L-malate dehydrogenase activity
FOA09_RS02030	COG0583	DNA-binding transcription factor activity
FOA09_RS02045	COG1733	regulation of RNA biosynthetic process
FOA09_RS02050	COG0778	Nitroreductase
FOA09_RS02055	COG0095	Lipoate-protein ligase
FOA09_RS02075	COG1609	Transcriptional regulator
FOA09_RS02085	COG2514	catechol 2,3-dioxygenase activity
FOA09_RS02090	COG1349	DNA-binding transcription factor activity
FOA09_RS02105	COG0534	Mate efflux family protein
FOA09_RS02120	COG0217	transcriptional regulatory protein
FOA09_RS02135	COG0346	lactoylglutathione lyase activity
FOA09_RS02145	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOA09_RS02150	COG2244	polysaccharide biosynthetic process
FOA09_RS02155	COG1187	pseudouridine synthase activity
FOA09_RS02170	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
FOA09_RS02175	COG1518	maintenance of DNA repeat elements
FOA09_RS02180	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
FOA09_RS02190	COG3594	Acyltransferase
FOA09_RS02195	COG1125	glycine betaine transport
FOA09_RS02195	COG0517	IMP dehydrogenase activity
FOA09_RS02200	COG1732	Glycine betaine
FOA09_RS02205	COG1438	arginine binding
FOA09_RS02210	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOA09_RS02220	COG0564	pseudouridine synthase activity
FOA09_RS02225	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOA09_RS02230	COG3679	Belongs to the UPF0342 family
FOA09_RS02245	COG3481	metal-dependent phosphohydrolase, HD sub domain
FOA09_RS02250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOA09_RS02260	COG0537	adenosine 5'-monophosphoramidase activity
FOA09_RS02265	COG1131	(ABC) transporter
FOA09_RS02270	COG4473	ABC transporter
FOA09_RS02275	COG0510	thiamine kinase activity
FOA09_RS02280	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FOA09_RS02295	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS02295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS02295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS02305	COG3684	Belongs to the aldolase LacD family
FOA09_RS02310	COG3557	Belongs to the UPF0374 family
FOA09_RS02320	COG0628	permease
FOA09_RS02325	COG1253	flavin adenine dinucleotide binding
FOA09_RS02330	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOA09_RS02355	COG0542	response to heat
FOA09_RS02365	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS02370	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOA09_RS02390	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOA09_RS02400	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS02400	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS02400	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS02405	COG1105	Belongs to the carbohydrate kinase PfkB family
FOA09_RS02410	COG1349	DNA-binding transcription factor activity
FOA09_RS02420	COG0210	DNA helicase
FOA09_RS02425	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOA09_RS02430	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOA09_RS02435	COG0154	amidase activity
FOA09_RS02440	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOA09_RS02445	COG1597	lipid kinase activity
FOA09_RS02450	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOA09_RS02460	COG2197	response regulator
FOA09_RS02465	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOA09_RS02470	COG0531	amino acid
FOA09_RS02475	COG2957	Belongs to the agmatine deiminase family
FOA09_RS02480	COG0549	Belongs to the carbamate kinase family
FOA09_RS02485	COG0154	amidase activity
FOA09_RS02495	COG1428	Deoxynucleoside kinase
FOA09_RS02525	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FOA09_RS02535	COG1054	Belongs to the UPF0176 family
FOA09_RS02580	COG2217	Heavy metal translocating P-type atpase
FOA09_RS02585	COG1285	pathogenesis
FOA09_RS02595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOA09_RS02600	COG0556	nucleotide-excision repair
FOA09_RS02605	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOA09_RS02615	COG1660	Displays ATPase and GTPase activities
FOA09_RS02625	COG1481	regulation of sporulation
FOA09_RS02640	COG0740	serine-type endopeptidase activity
FOA09_RS02670	COG0584	glycerophosphoryl diester phosphodiesterase
FOA09_RS02675	COG2816	NAD+ diphosphatase activity
FOA09_RS02680	COG1278	Cold shock
FOA09_RS02690	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOA09_RS02695	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FOA09_RS02695	COG2755	lipolytic protein G-D-S-L family
FOA09_RS02700	COG1122	ATPase activity
FOA09_RS02710	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FOA09_RS02715	COG0477	Major facilitator Superfamily
FOA09_RS02730	COG1132	(ABC) transporter
FOA09_RS02735	COG1132	(ABC) transporter
FOA09_RS02745	COG1309	transcriptional regulator
FOA09_RS02750	COG0577	efflux transmembrane transporter activity
FOA09_RS02755	COG1136	(ABC) transporter
FOA09_RS02760	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FOA09_RS02765	COG1242	4 iron, 4 sulfur cluster binding
FOA09_RS02770	COG0671	phosphoesterase, PA-phosphatase related
FOA09_RS02785	COG1388	LysM domain
FOA09_RS02785	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS02790	COG0495	leucyl-tRNA aminoacylation
FOA09_RS02805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOA09_RS02810	COG1126	abc transporter atp-binding protein
FOA09_RS02815	COG0765	amino acid transport
FOA09_RS02820	COG4166	transmembrane transport
FOA09_RS02835	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FOA09_RS02840	COG1187	pseudouridine synthase activity
FOA09_RS02845	COG1011	Hydrolase
FOA09_RS02860	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOA09_RS02865	COG0673	inositol 2-dehydrogenase activity
FOA09_RS02870	COG3711	transcriptional antiterminator
FOA09_RS02900	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS02915	COG3964	amidohydrolase
FOA09_RS02935	COG0187	DNA topoisomerase II activity
FOA09_RS02940	COG1671	Belongs to the UPF0178 family
FOA09_RS02945	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOA09_RS02950	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOA09_RS02960	COG0736	holo-[acyl-carrier-protein] synthase activity
FOA09_RS02965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOA09_RS02970	COG2337	Toxic component of a toxin-antitoxin (TA) module
FOA09_RS02990	COG0681	Belongs to the peptidase S26 family
FOA09_RS03000	COG2365	Tyrosine phosphatase family
FOA09_RS03020	COG0531	amino acid
FOA09_RS03030	COG1174	glycine betaine transport
FOA09_RS03050	COG0346	lactoylglutathione lyase activity
FOA09_RS03055	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FOA09_RS03070	COG3158	transport of potassium into the cell
FOA09_RS03080	COG2217	Heavy metal translocating P-type atpase
FOA09_RS03090	COG4989	oxidoreductase activity
FOA09_RS03095	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOA09_RS03095	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FOA09_RS03100	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOA09_RS03105	COG0237	dephospho-CoA kinase activity
FOA09_RS03110	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOA09_RS03115	COG3611	Membrane attachment protein
FOA09_RS03120	COG1484	DNA-dependent DNA replication
FOA09_RS03165	COG1126	abc transporter atp-binding protein
FOA09_RS03170	COG0765	amino acid transport
FOA09_RS03175	COG0371	Dehydrogenase
FOA09_RS03180	COG0343	queuine tRNA-ribosyltransferase activity
FOA09_RS03185	COG1862	Preprotein translocase
FOA09_RS03195	COG1012	belongs to the aldehyde dehydrogenase family
FOA09_RS03195	COG1454	alcohol dehydrogenase
FOA09_RS03200	COG1304	FMN binding
FOA09_RS03230	COG4166	transmembrane transport
FOA09_RS03240	COG0601	transmembrane transport
FOA09_RS03245	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOA09_RS03250	COG0444	Belongs to the ABC transporter superfamily
FOA09_RS03255	COG4608	Belongs to the ABC transporter superfamily
FOA09_RS03265	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOA09_RS03270	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOA09_RS03275	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FOA09_RS03280	COG2315	Protein conserved in bacteria
FOA09_RS03285	COG3759	membrane
FOA09_RS03295	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOA09_RS03295	COG0456	acetyltransferase
FOA09_RS03300	COG0659	secondary active sulfate transmembrane transporter activity
FOA09_RS03305	COG2855	membrane
FOA09_RS03325	COG0745	RESPONSE REGULATOR receiver
FOA09_RS03330	COG2205	protein histidine kinase activity
FOA09_RS03335	COG4975	Glucose uptake
FOA09_RS03340	COG0531	amino acid
FOA09_RS03345	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOA09_RS03345	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOA09_RS03355	COG3973	AAA domain
FOA09_RS03360	COG0084	hydrolase, TatD family'
FOA09_RS03365	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FOA09_RS03370	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOA09_RS03380	COG3842	ATPase activity
FOA09_RS03385	COG1803	Methylglyoxal synthase
FOA09_RS03390	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOA09_RS03395	COG1132	(ABC) transporter
FOA09_RS03410	COG3584	3D domain protein
FOA09_RS03445	COG0561	phosphatase activity
FOA09_RS03450	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FOA09_RS03455	COG0280	phosphate acetyltransferase
FOA09_RS03460	COG0802	atpase or kinase
FOA09_RS03475	COG1609	Transcriptional regulator
FOA09_RS03480	COG2017	converts alpha-aldose to the beta-anomer
FOA09_RS03485	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOA09_RS03495	COG1263	PTS System
FOA09_RS03495	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS03495	COG2190	(PTS) system
FOA09_RS03505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOA09_RS03510	COG2207	Transcriptional regulator
FOA09_RS03510	COG4753	response regulator
FOA09_RS03530	COG1131	(ABC) transporter
FOA09_RS03545	COG0535	radical SAM domain protein
FOA09_RS03555	COG0789	Transcriptional regulator
FOA09_RS03570	COG1674	ftsk spoiiie
FOA09_RS03580	COG2946	Replication initiation factor
FOA09_RS03610	COG0791	NLP P60 protein
FOA09_RS03610	COG0741	lytic transglycosylase activity
FOA09_RS03670	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOA09_RS03680	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FOA09_RS03750	COG3935	DnaD domain protein
FOA09_RS03845	COG0228	four-way junction DNA binding
FOA09_RS03905	COG1192	Involved in chromosome partitioning
FOA09_RS03920	COG3223	Belongs to the PsiE family
FOA09_RS03925	COG1408	metallophosphoesterase
FOA09_RS03930	COG0006	proline dipeptidase activity
FOA09_RS03935	COG1694	Mazg nucleotide pyrophosphohydrolase
FOA09_RS03940	COG1302	Protein conserved in bacteria
FOA09_RS03945	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOA09_RS03950	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FOA09_RS03955	COG1570	exodeoxyribonuclease VII activity
FOA09_RS03960	COG1722	exodeoxyribonuclease VII activity
FOA09_RS03965	COG0142	geranyltranstransferase activity
FOA09_RS03970	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FOA09_RS03975	COG1438	arginine binding
FOA09_RS03980	COG0497	DNA recombination
FOA09_RS04000	COG2001	Belongs to the MraZ family
FOA09_RS04005	COG0275	rRNA processing
FOA09_RS04015	COG0768	penicillin binding
FOA09_RS04020	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOA09_RS04025	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOA09_RS04030	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOA09_RS04035	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOA09_RS04040	COG0849	cell division
FOA09_RS04045	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOA09_RS04050	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOA09_RS04055	COG1799	cell septum assembly
FOA09_RS04060	COG0762	integral membrane protein
FOA09_RS04065	COG2302	S4 RNA-binding domain
FOA09_RS04070	COG3599	regulation of cell shape
FOA09_RS04075	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOA09_RS04080	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FOA09_RS04100	COG0673	inositol 2-dehydrogenase activity
FOA09_RS04105	COG0513	Belongs to the DEAD box helicase family
FOA09_RS04110	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOA09_RS04110	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOA09_RS04115	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04120	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04140	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04145	COG1447	Phosphotransferase system cellobiose-specific component IIA
FOA09_RS04150	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04155	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS04175	COG0574	Belongs to the PEP-utilizing enzyme family
FOA09_RS04175	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOA09_RS04180	COG0517	IMP dehydrogenase activity
FOA09_RS04185	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FOA09_RS04190	COG0392	lysyltransferase activity
FOA09_RS04190	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
FOA09_RS04230	COG0105	UTP biosynthetic process
FOA09_RS04245	COG0561	phosphatase activity
FOA09_RS04255	COG2252	PERMEase
FOA09_RS04260	COG2814	Major facilitator Superfamily
FOA09_RS04270	COG0587	DNA-directed DNA polymerase activity
FOA09_RS04275	COG0205	6-phosphofructokinase activity
FOA09_RS04290	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOA09_RS04295	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FOA09_RS04300	COG0745	RESPONSE REGULATOR receiver
FOA09_RS04305	COG5002	protein histidine kinase activity
FOA09_RS04395	COG1116	anion transmembrane transporter activity
FOA09_RS04400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOA09_RS04405	COG1660	Displays ATPase and GTPase activities
FOA09_RS04410	COG1914	H( )-stimulated, divalent metal cation uptake system
FOA09_RS04425	COG4166	transmembrane transport
FOA09_RS04430	COG0402	S-adenosylhomocysteine deaminase activity
FOA09_RS04435	COG0402	S-adenosylhomocysteine deaminase activity
FOA09_RS04440	COG1956	GAF domain-containing protein
FOA09_RS04450	COG0110	maltose O-acetyltransferase activity
FOA09_RS04465	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FOA09_RS04470	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOA09_RS04475	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
FOA09_RS04480	COG1609	Transcriptional regulator
FOA09_RS04485	COG0572	uridine kinase
FOA09_RS04505	COG2814	Major facilitator Superfamily
FOA09_RS04510	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FOA09_RS04540	COG0456	acetyltransferase
FOA09_RS04630	COG1132	(ABC) transporter
FOA09_RS04645	COG1113	amino acid transport
FOA09_RS04660	COG0247	lactate metabolic process
FOA09_RS04665	COG1139	Iron-sulfur cluster binding protein
FOA09_RS04680	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
FOA09_RS04685	COG1074	ATP-dependent DNA helicase activity
FOA09_RS04690	COG1733	regulation of RNA biosynthetic process
FOA09_RS04695	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOA09_RS04700	COG0072	phenylalanine-tRNA ligase activity
FOA09_RS04700	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOA09_RS04705	COG0765	amino acid transport
FOA09_RS04710	COG0765	amino acid transport
FOA09_RS04715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOA09_RS04725	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOA09_RS04730	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FOA09_RS04735	COG0622	Phosphoesterase
FOA09_RS04740	COG1349	DNA-binding transcription factor activity
FOA09_RS04750	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS04755	COG3037	sugar-specific permease SgaT UlaA
FOA09_RS04765	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FOA09_RS04770	COG3623	hexulose-6-phosphate isomerase
FOA09_RS04780	COG0517	IMP dehydrogenase activity
FOA09_RS04785	COG2171	N-acyltransferase activity
FOA09_RS04790	COG1473	amidohydrolase
FOA09_RS04795	COG0668	transmembrane transport
FOA09_RS04805	COG0656	L-ascorbic acid biosynthetic process
FOA09_RS04810	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FOA09_RS04830	COG1078	dGTPase activity
FOA09_RS04835	COG0095	Lipoate-protein ligase
FOA09_RS04850	COG0504	CTP synthase activity
FOA09_RS04855	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOA09_RS04860	COG3331	DNA recombination
FOA09_RS04865	COG4474	Belongs to the UPF0398 family
FOA09_RS04870	COG3599	regulation of cell shape
FOA09_RS04880	COG0116	Belongs to the methyltransferase superfamily
FOA09_RS04885	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FOA09_RS04890	COG3935	DnaD domain protein
FOA09_RS04895	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOA09_RS04900	COG2188	Transcriptional regulator
FOA09_RS04910	COG1446	asparaginase
FOA09_RS04915	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04920	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS04930	COG1199	ATP-dependent helicase activity
FOA09_RS04930	COG1199	ATP-dependent helicase activity
FOA09_RS04945	COG1666	GTP binding
FOA09_RS04950	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOA09_RS04955	COG0191	fructose-bisphosphate aldolase activity
FOA09_RS04960	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOA09_RS04965	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOA09_RS04970	COG0254	rRNA binding
FOA09_RS04980	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FOA09_RS04990	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOA09_RS05005	COG1940	carbohydrate kinase activity
FOA09_RS05010	COG3237	CsbD-like
FOA09_RS05015	COG0778	Nitroreductase
FOA09_RS05020	COG1854	S-ribosylhomocysteine lyase activity
FOA09_RS05025	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOA09_RS05030	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOA09_RS05040	COG0737	Belongs to the 5'-nucleotidase family
FOA09_RS05045	COG4470	Protein conserved in bacteria
FOA09_RS05050	COG0647	UMP catabolic process
FOA09_RS05065	COG1307	EDD domain protein, DegV family
FOA09_RS05070	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOA09_RS05075	COG0745	RESPONSE REGULATOR receiver
FOA09_RS05080	COG5002	protein histidine kinase activity
FOA09_RS05095	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FOA09_RS05100	COG0701	Predicted permease
FOA09_RS05105	COG3689	TIGRFAM TIGR03943 family protein
FOA09_RS05120	COG4472	Bacterial protein of unknown function (DUF965)
FOA09_RS05125	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOA09_RS05130	COG3906	Belongs to the UPF0473 family
FOA09_RS05145	COG3493	citrate carrier protein
FOA09_RS05150	COG3290	protein histidine kinase activity
FOA09_RS05155	COG4565	transcriptional regulatory protein
FOA09_RS05160	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOA09_RS05165	COG1316	TRANSCRIPTIONal
FOA09_RS05170	COG0028	Belongs to the TPP enzyme family
FOA09_RS05175	COG3527	Alpha-acetolactate decarboxylase
FOA09_RS05195	COG1175	transmembrane transport
FOA09_RS05205	COG3842	ATPase activity
FOA09_RS05215	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FOA09_RS05220	COG0402	S-adenosylhomocysteine deaminase activity
FOA09_RS05240	COG1053	succinate dehydrogenase
FOA09_RS05240	COG0431	NADPH-dependent FMN reductase
FOA09_RS05240	COG3976	FMN-binding domain protein
FOA09_RS05255	COG1408	metallophosphoesterase
FOA09_RS05260	COG4209	transmembrane transport
FOA09_RS05265	COG0395	ABC-type sugar transport system, permease component
FOA09_RS05280	COG3458	cephalosporin-C deacetylase activity
FOA09_RS05295	COG3459	Glycosyltransferase 36 associated
FOA09_RS05300	COG1609	Transcriptional regulator
FOA09_RS05310	COG2188	Transcriptional regulator
FOA09_RS05315	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS05320	COG0673	inositol 2-dehydrogenase activity
FOA09_RS05325	COG2707	UPF0756 membrane protein
FOA09_RS05340	COG1293	RNA-binding protein homologous to eukaryotic snRNP
FOA09_RS05360	COG1122	ATPase activity
FOA09_RS05380	COG0561	phosphatase activity
FOA09_RS05385	COG0745	RESPONSE REGULATOR receiver
FOA09_RS05390	COG3850	Histidine kinase
FOA09_RS05390	COG5002	protein histidine kinase activity
FOA09_RS05405	COG1368	sulfuric ester hydrolase activity
FOA09_RS05410	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FOA09_RS05415	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOA09_RS05420	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOA09_RS05425	COG1388	LysM domain
FOA09_RS05425	COG4932	domain protein
FOA09_RS05430	COG0779	Required for maturation of 30S ribosomal subunits
FOA09_RS05435	COG0195	Participates in both transcription termination and antitermination
FOA09_RS05440	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FOA09_RS05450	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOA09_RS05455	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOA09_RS05535	COG4824	toxin secretion phage lysis holin
FOA09_RS05545	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOA09_RS05550	COG0196	riboflavin kinase activity
FOA09_RS05560	COG1695	Transcriptional regulator
FOA09_RS05580	COG0772	Belongs to the SEDS family
FOA09_RS05585	COG0583	DNA-binding transcription factor activity
FOA09_RS05590	COG0583	DNA-binding transcription factor activity
FOA09_RS05595	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOA09_RS05600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOA09_RS05605	COG1420	regulation of RNA biosynthetic process
FOA09_RS05610	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOA09_RS05615	COG0443	Heat shock 70 kDa protein
FOA09_RS05620	COG0484	heat shock protein binding
FOA09_RS05630	COG2183	response to ionizing radiation
FOA09_RS05635	COG3091	SprT-like family
FOA09_RS05645	COG0436	Aminotransferase
FOA09_RS05690	COG2268	Band 7 protein
FOA09_RS05715	COG1309	transcriptional regulator
FOA09_RS05725	COG2188	Transcriptional regulator
FOA09_RS05730	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOA09_RS05750	COG1131	(ABC) transporter
FOA09_RS05755	COG3290	protein histidine kinase activity
FOA09_RS05760	COG3279	Response regulator of the LytR AlgR family
FOA09_RS05770	COG0492	ferredoxin-NADP+ reductase activity
FOA09_RS05785	COG1136	(ABC) transporter
FOA09_RS05785	COG0577	efflux transmembrane transporter activity
FOA09_RS05785	COG1136	(ABC) transporter
FOA09_RS05785	COG0577	efflux transmembrane transporter activity
FOA09_RS05795	COG3833	ABC-type maltose transport systems, permease component
FOA09_RS05800	COG1175	transmembrane transport
FOA09_RS05805	COG2182	Extracellular solute-binding protein
FOA09_RS05810	COG0366	Alpha amylase catalytic
FOA09_RS05815	COG0366	Alpha amylase catalytic
FOA09_RS05820	COG0366	Alpha amylase catalytic
FOA09_RS05830	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOA09_RS05860	COG0371	Dehydrogenase
FOA09_RS05865	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FOA09_RS05870	COG2376	Dihydroxyacetone kinase
FOA09_RS05875	COG1461	Dihydroxyacetone kinase
FOA09_RS05885	COG3425	synthase
FOA09_RS05895	COG0628	permease
FOA09_RS05905	COG1278	Cold shock
FOA09_RS05920	COG2814	Major facilitator Superfamily
FOA09_RS05925	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FOA09_RS05930	COG4109	DRTGG domain
FOA09_RS05935	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FOA09_RS05940	COG2824	Alkylphosphonate utilization operon protein PhnA
FOA09_RS05955	COG0513	Belongs to the DEAD box helicase family
FOA09_RS05965	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOA09_RS05970	COG2384	SAM-dependent methyltransferase
FOA09_RS05975	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOA09_RS05980	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOA09_RS05995	COG0746	molybdenum cofactor guanylyltransferase activity
FOA09_RS06000	COG2116	formate transmembrane transporter activity
FOA09_RS06015	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FOA09_RS06020	COG3383	formate dehydrogenase (NAD+) activity
FOA09_RS06025	COG0303	'Molybdopterin
FOA09_RS06030	COG0315	cyclic pyranopterin monophosphate synthase activity
FOA09_RS06045	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOA09_RS06055	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOA09_RS06060	COG4149	molybdate abc transporter
FOA09_RS06065	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FOA09_RS06070	COG2217	Heavy metal translocating P-type atpase
FOA09_RS06080	COG1286	toxin biosynthetic process
FOA09_RS06085	COG1193	negative regulation of DNA recombination
FOA09_RS06090	COG3118	belongs to the thioredoxin family
FOA09_RS06095	COG0322	excinuclease ABC activity
FOA09_RS06105	COG4152	abc transporter atp-binding protein
FOA09_RS06110	COG1668	transmembrane transport
FOA09_RS06115	COG1609	Transcriptional regulator
FOA09_RS06120	COG1486	melibiose metabolic process
FOA09_RS06135	COG2081	HI0933 family
FOA09_RS06140	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOA09_RS06165	COG1269	ATP hydrolysis coupled proton transport
FOA09_RS06170	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOA09_RS06175	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
FOA09_RS06180	COG1527	subunit (C
FOA09_RS06185	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
FOA09_RS06190	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
FOA09_RS06195	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
FOA09_RS06200	COG1394	ATPase activity, coupled to movement of substances
FOA09_RS06225	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
FOA09_RS06230	COG0019	diaminopimelate decarboxylase activity
FOA09_RS06255	COG2151	metal-sulfur cluster biosynthetic enzyme
FOA09_RS06260	COG4948	Mandelate Racemase Muconate Lactonizing
FOA09_RS06270	COG4166	transmembrane transport
FOA09_RS06275	COG3711	transcriptional antiterminator
FOA09_RS06285	COG3711	transcriptional antiterminator
FOA09_RS06285	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS06295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS06295	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS06295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FOA09_RS06300	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS06310	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOA09_RS06315	COG0741	lytic transglycosylase activity
FOA09_RS06320	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOA09_RS06325	COG0358	DNA primase activity
FOA09_RS06330	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FOA09_RS06340	COG2996	Protein conserved in bacteria
FOA09_RS06345	COG0735	belongs to the Fur family
FOA09_RS06355	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOA09_RS06365	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS06380	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FOA09_RS06395	COG4974	Belongs to the 'phage' integrase family
FOA09_RS06400	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FOA09_RS06405	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FOA09_RS06410	COG1187	pseudouridine synthase activity
FOA09_RS06415	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FOA09_RS06435	COG0514	ATP-dependent DNA helicase (RecQ)
FOA09_RS06445	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOA09_RS06450	COG0539	negative regulation of cytoplasmic translation
FOA09_RS06455	COG1160	GTP binding
FOA09_RS06470	COG0457	Tetratricopeptide repeat
FOA09_RS06475	COG5582	Belongs to the UPF0302 family
FOA09_RS06480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOA09_RS06485	COG1694	Mazg nucleotide pyrophosphohydrolase
FOA09_RS06490	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FOA09_RS06495	COG0617	tRNA 3'-terminal CCA addition
FOA09_RS06510	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOA09_RS06515	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FOA09_RS06525	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOA09_RS06530	COG0287	Prephenate dehydrogenase
FOA09_RS06540	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOA09_RS06545	COG0077	Prephenate dehydratase
FOA09_RS06555	COG1307	EDD domain protein, DegV family
FOA09_RS06580	COG0488	(ABC) transporter
FOA09_RS06585	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FOA09_RS06595	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOA09_RS06600	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOA09_RS06605	COG4224	UPF0291 protein
FOA09_RS06615	COG2814	Major facilitator Superfamily
FOA09_RS06620	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS06620	COG1388	LysM domain
FOA09_RS06630	COG0735	belongs to the Fur family
FOA09_RS06635	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOA09_RS06640	COG2816	NAD+ diphosphatase activity
FOA09_RS06655	COG2207	Transcriptional regulator
FOA09_RS06660	COG1132	(ABC) transporter
FOA09_RS06665	COG1132	(ABC) transporter
FOA09_RS06680	COG0753	catalase activity
FOA09_RS06685	COG1349	DNA-binding transcription factor activity
FOA09_RS06690	COG0546	phosphoglycolate phosphatase activity
FOA09_RS06700	COG0415	Belongs to the DNA photolyase family
FOA09_RS06710	COG1263	PTS System
FOA09_RS06710	COG2190	(PTS) system
FOA09_RS06710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS06715	COG0366	Alpha amylase catalytic
FOA09_RS06725	COG1609	Transcriptional regulator
FOA09_RS06735	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS06740	COG1263	PTS System
FOA09_RS06740	COG2190	(PTS) system
FOA09_RS06740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS06750	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
FOA09_RS06760	COG1227	inorganic diphosphatase activity
FOA09_RS06765	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FOA09_RS06770	COG1882	Formate acetyltransferase
FOA09_RS06775	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FOA09_RS06780	COG0187	DNA topoisomerase II activity
FOA09_RS06800	COG1832	CoA-binding protein
FOA09_RS06805	COG4766	ethanolamine catabolic process
FOA09_RS06810	COG3192	ethanolamine utilization protein
FOA09_RS06815	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
FOA09_RS06825	COG4869	propanediol catabolic process
FOA09_RS06840	COG1454	alcohol dehydrogenase
FOA09_RS06840	COG1012	belongs to the aldehyde dehydrogenase family
FOA09_RS06855	COG4302	ethanolamine ammonia-lyase activity
FOA09_RS06860	COG4303	Ethanolamine ammonia lyase large subunit
FOA09_RS06890	COG2096	Adenosyltransferase
FOA09_RS06900	COG1120	ATPase activity
FOA09_RS06905	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOA09_RS06910	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOA09_RS06915	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOA09_RS06925	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
FOA09_RS06930	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FOA09_RS06935	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FOA09_RS06945	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FOA09_RS06950	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOA09_RS06955	COG1266	CAAX protease self-immunity
FOA09_RS06960	COG0758	DNA mediated transformation
FOA09_RS06965	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOA09_RS06975	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOA09_RS06980	COG0583	DNA-binding transcription factor activity
FOA09_RS06990	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOA09_RS06995	COG0022	dehydrogenase e1 component
FOA09_RS07000	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOA09_RS07005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOA09_RS07010	COG3426	butyrate kinase activity
FOA09_RS07015	COG0280	phosphate acetyltransferase
FOA09_RS07035	COG1028	Short-chain dehydrogenase reductase Sdr
FOA09_RS07045	COG0346	lactoylglutathione lyase activity
FOA09_RS07055	COG0604	alcohol dehydrogenase
FOA09_RS07060	COG0577	efflux transmembrane transporter activity
FOA09_RS07065	COG1136	(ABC) transporter
FOA09_RS07075	COG1131	(ABC) transporter
FOA09_RS07090	COG0681	Belongs to the peptidase S26 family
FOA09_RS07095	COG0793	Belongs to the peptidase S41A family
FOA09_RS07095	COG3409	Peptidoglycan-binding domain 1 protein
FOA09_RS07100	COG4479	Belongs to the UPF0346 family
FOA09_RS07105	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOA09_RS07110	COG4698	Protein conserved in bacteria
FOA09_RS07115	COG2755	lipolytic protein G-D-S-L family
FOA09_RS07120	COG1307	EDD domain protein, DegV family
FOA09_RS07125	COG1272	protein, Hemolysin III
FOA09_RS07135	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOA09_RS07140	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FOA09_RS07140	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FOA09_RS07145	COG5416	Lipopolysaccharide assembly protein A domain
FOA09_RS07150	COG0300	oxidoreductase activity
FOA09_RS07155	COG1234	tRNA 3'-trailer cleavage
FOA09_RS07165	COG1837	Belongs to the UPF0109 family
FOA09_RS07170	COG0228	four-way junction DNA binding
FOA09_RS07175	COG1214	PFAM Peptidase M22, glycoprotease
FOA09_RS07175	COG0456	acetyltransferase
FOA09_RS07180	COG0431	NADPH-dependent FMN reductase
FOA09_RS07185	COG0789	Transcriptional regulator
FOA09_RS07190	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOA09_RS07195	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
FOA09_RS07200	COG1683	Conserved Protein
FOA09_RS07205	COG0745	RESPONSE REGULATOR receiver
FOA09_RS07210	COG5002	protein histidine kinase activity
FOA09_RS07220	COG0436	Aminotransferase
FOA09_RS07225	COG0383	alpha-mannosidase activity
FOA09_RS07240	COG0583	DNA-binding transcription factor activity
FOA09_RS07255	COG0284	orotidine-5'-phosphate decarboxylase activity
FOA09_RS07260	COG0167	dihydroorotate dehydrogenase activity
FOA09_RS07265	COG0543	2 iron, 2 sulfur cluster binding
FOA09_RS07270	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FOA09_RS07275	COG0505	Belongs to the CarA family
FOA09_RS07280	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOA09_RS07285	COG0540	Belongs to the ATCase OTCase family
FOA09_RS07290	COG2233	PERMEase
FOA09_RS07300	COG0564	pseudouridine synthase activity
FOA09_RS07305	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOA09_RS07315	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FOA09_RS07320	COG1278	Cold shock
FOA09_RS07330	COG0328	RNA-DNA hybrid ribonuclease activity
FOA09_RS07335	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOA09_RS07340	COG0710	3-dehydroquinate dehydratase activity
FOA09_RS07345	COG1132	(ABC) transporter
FOA09_RS07350	COG1132	(ABC) transporter
FOA09_RS07355	COG3763	UPF0154 protein
FOA09_RS07360	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FOA09_RS07375	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOA09_RS07390	COG1131	(ABC) transporter
FOA09_RS07395	COG1609	Transcriptional regulator
FOA09_RS07400	COG0006	proline dipeptidase activity
FOA09_RS07405	COG4980	gas vesicle protein
FOA09_RS07415	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOA09_RS07420	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOA09_RS07425	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FOA09_RS07430	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FOA09_RS07435	COG0322	excinuclease ABC activity
FOA09_RS07440	COG1950	PFAM Membrane protein of
FOA09_RS07450	COG3595	metallopeptidase activity
FOA09_RS07455	COG0704	Plays a role in the regulation of phosphate uptake
FOA09_RS07460	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOA09_RS07465	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOA09_RS07470	COG0581	inorganic phosphate transmembrane transporter activity
FOA09_RS07475	COG0573	inorganic phosphate transmembrane transporter activity
FOA09_RS07485	COG2177	Part of the ABC transporter FtsEX involved in
FOA09_RS07490	COG2884	Cell division ATP-binding protein ftsE
FOA09_RS07500	COG0653	protein targeting
FOA09_RS07515	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FOA09_RS07520	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS07530	COG1739	Uncharacterized protein family UPF0029
FOA09_RS07540	COG1028	Short-chain dehydrogenase reductase Sdr
FOA09_RS07560	COG0151	Belongs to the GarS family
FOA09_RS07565	COG0138	bifunctional purine biosynthesis protein purh
FOA09_RS07570	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOA09_RS07575	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOA09_RS07585	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOA09_RS07590	COG0047	phosphoribosylformylglycinamidine synthase activity
FOA09_RS07595	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOA09_RS07600	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FOA09_RS07605	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOA09_RS07610	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOA09_RS07620	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOA09_RS07625	COG4166	transmembrane transport
FOA09_RS07635	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOA09_RS07640	COG4876	unkown
FOA09_RS07655	COG0628	permease
FOA09_RS07660	COG1470	cell adhesion involved in biofilm formation
FOA09_RS07660	COG0366	Alpha amylase catalytic
FOA09_RS07670	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS07675	COG3715	PTS system
FOA09_RS07680	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS07680	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS07690	COG1105	Belongs to the carbohydrate kinase PfkB family
FOA09_RS07695	COG3684	Belongs to the aldolase LacD family
FOA09_RS07700	COG2222	sugar isomerase
FOA09_RS07705	COG2188	Transcriptional regulator
FOA09_RS07710	COG1442	glycosyl transferase family 8
FOA09_RS07715	COG1442	glycosyl transferase family 8
FOA09_RS07720	COG1368	sulfuric ester hydrolase activity
FOA09_RS07730	COG0583	DNA-binding transcription factor activity
FOA09_RS07745	COG3227	Zinc metalloprotease (Elastase)
FOA09_RS07765	COG3942	CHAP domain
FOA09_RS07765	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS07780	COG1064	alcohol dehydrogenase
FOA09_RS07815	COG1606	tRNA processing
FOA09_RS07820	COG1122	ATPase activity
FOA09_RS07830	COG0310	cobalt ion transport
FOA09_RS07835	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOA09_RS07840	COG3875	lactate racemase activity
FOA09_RS07845	COG1691	(AIR) carboxylase
FOA09_RS07850	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
FOA09_RS07855	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOA09_RS07860	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS07870	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS07870	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS07875	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOA09_RS07885	COG0698	ribose 5-phosphate isomerase
FOA09_RS07890	COG0698	ribose 5-phosphate isomerase
FOA09_RS07905	COG3775	system Galactitol-specific IIC component
FOA09_RS07910	COG1349	DNA-binding transcription factor activity
FOA09_RS07925	COG0726	polysaccharide deacetylase
FOA09_RS07940	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOA09_RS07995	COG0335	large ribosomal subunit rRNA binding
FOA09_RS08000	COG0336	Belongs to the RNA methyltransferase TrmD family
FOA09_RS08005	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FOA09_RS08010	COG1914	H( )-stimulated, divalent metal cation uptake system
FOA09_RS08020	COG0398	Pfam SNARE associated Golgi protein
FOA09_RS08025	COG0584	glycerophosphoryl diester phosphodiesterase
FOA09_RS08040	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOA09_RS08050	COG4129	membrane
FOA09_RS08060	COG1940	carbohydrate kinase activity
FOA09_RS08065	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FOA09_RS08075	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOA09_RS08080	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOA09_RS08085	COG2706	6-phosphogluconolactonase activity
FOA09_RS08095	COG3069	C4-dicarboxylate transmembrane transporter activity
FOA09_RS08125	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FOA09_RS08135	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FOA09_RS08175	COG2364	Membrane
FOA09_RS08180	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOA09_RS08190	COG2814	Major facilitator Superfamily
FOA09_RS08195	COG1368	sulfuric ester hydrolase activity
FOA09_RS08220	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOA09_RS08225	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS08230	COG3715	PTS system
FOA09_RS08245	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FOA09_RS08245	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FOA09_RS08260	COG0149	triose-phosphate isomerase activity
FOA09_RS08265	COG0126	phosphoglycerate kinase activity
FOA09_RS08275	COG2390	Transcriptional regulator
FOA09_RS08280	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOA09_RS08285	COG4475	Protein of unknown function (DUF436)
FOA09_RS08290	COG4720	Psort location CytoplasmicMembrane, score
FOA09_RS08295	COG0351	phosphomethylpyrimidine kinase
FOA09_RS08300	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FOA09_RS08305	COG0124	histidyl-tRNA synthetase
FOA09_RS08310	COG1490	D-aminoacyl-tRNA deacylase activity
FOA09_RS08315	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOA09_RS08320	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOA09_RS08325	COG2264	protein methyltransferase activity
FOA09_RS08335	COG2094	Belongs to the DNA glycosylase MPG family
FOA09_RS08340	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOA09_RS08355	COG0589	response to stress
FOA09_RS08360	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOA09_RS08365	COG0827	DNA restriction-modification system
FOA09_RS08395	COG3942	CHAP domain
FOA09_RS08395	COG1388	LysM domain
FOA09_RS08520	COG1783	phage Terminase large subunit
FOA09_RS08655	COG1396	sequence-specific DNA binding
FOA09_RS08670	COG0582	viral genome integration into host DNA
FOA09_RS08680	COG4537	Required for transformation and DNA binding
FOA09_RS08690	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOA09_RS08695	COG0531	amino acid
FOA09_RS08700	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOA09_RS08705	COG0577	efflux transmembrane transporter activity
FOA09_RS08710	COG1136	(ABC) transporter
FOA09_RS08720	COG1674	ftsk spoiiie
FOA09_RS08725	COG1252	NADH dehydrogenase
FOA09_RS08740	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOA09_RS08745	COG4988	ABC transporter
FOA09_RS08750	COG1294	oxidase, subunit
FOA09_RS08755	COG1271	oxidase subunit
FOA09_RS08760	COG3708	Transcriptional regulator
FOA09_RS08760	COG2207	Transcriptional regulator
FOA09_RS08780	COG1881	PFAM PEBP family protein
FOA09_RS08785	COG2814	Major facilitator Superfamily
FOA09_RS08790	COG0482	sulfurtransferase activity
FOA09_RS08800	COG1104	cysteine desulfurase activity
FOA09_RS08805	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOA09_RS08810	COG1121	(ABC) transporter
FOA09_RS08815	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOA09_RS08825	COG0488	(ABC) transporter
FOA09_RS08830	COG1473	amidohydrolase
FOA09_RS08840	COG2011	ABC-type metal ion transport system permease component
FOA09_RS08845	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOA09_RS08880	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOA09_RS08890	COG1122	ATPase activity
FOA09_RS08895	COG4720	Psort location CytoplasmicMembrane, score
FOA09_RS08900	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOA09_RS08910	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
FOA09_RS08925	COG0789	Transcriptional regulator
FOA09_RS08930	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOA09_RS08935	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOA09_RS08940	COG0584	glycerophosphoryl diester phosphodiesterase
FOA09_RS08960	COG4641	Protein conserved in bacteria
FOA09_RS08960	COG0438	transferase activity, transferring glycosyl groups
FOA09_RS08965	COG3475	LICD family
FOA09_RS08975	COG1442	glycosyl transferase family 8
FOA09_RS08975	COG1216	Glycosyl transferase, family 2
FOA09_RS08980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOA09_RS08995	COG3475	LICD family
FOA09_RS09005	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FOA09_RS09020	COG0438	transferase activity, transferring glycosyl groups
FOA09_RS09020	COG1216	Glycosyl transferase, family 2
FOA09_RS09025	COG1216	Glycosyl transferase, family 2
FOA09_RS09025	COG0438	transferase activity, transferring glycosyl groups
FOA09_RS09030	COG1134	teichoic acid transport
FOA09_RS09035	COG1682	transport, permease protein
FOA09_RS09055	COG1215	transferase activity, transferring glycosyl groups
FOA09_RS09060	COG1091	dTDP-4-dehydrorhamnose reductase activity
FOA09_RS09065	COG1088	dTDP-glucose 4,6-dehydratase activity
FOA09_RS09075	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FOA09_RS09095	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOA09_RS09100	COG1295	ribonuclease BN
FOA09_RS09105	COG0024	Methionine aminopeptidase
FOA09_RS09110	COG0716	FMN binding
FOA09_RS09115	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FOA09_RS09120	COG1309	transcriptional regulator
FOA09_RS09125	COG2309	aminopeptidase activity
FOA09_RS09140	COG0590	tRNA wobble adenosine to inosine editing
FOA09_RS09150	COG0384	phenazine biosynthesis protein PhzF
FOA09_RS09160	COG2738	Putative neutral zinc metallopeptidase
FOA09_RS09175	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS09175	COG1263	PTS System
FOA09_RS09180	COG0346	lactoylglutathione lyase activity
FOA09_RS09200	COG4753	response regulator
FOA09_RS09200	COG2207	Transcriptional regulator
FOA09_RS09205	COG2972	Histidine kinase
FOA09_RS09215	COG1653	transport
FOA09_RS09220	COG0395	ABC-type sugar transport system, permease component
FOA09_RS09225	COG1175	transmembrane transport
FOA09_RS09240	COG1132	(ABC) transporter
FOA09_RS09265	COG0395	ABC-type sugar transport system, permease component
FOA09_RS09270	COG1175	transmembrane transport
FOA09_RS09280	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FOA09_RS09295	COG1609	Transcriptional regulator
FOA09_RS09310	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOA09_RS09315	COG1082	Xylose isomerase domain protein TIM barrel
FOA09_RS09320	COG0673	inositol 2-dehydrogenase activity
FOA09_RS09330	COG1012	belongs to the aldehyde dehydrogenase family
FOA09_RS09335	COG3718	enzyme involved in inositol metabolism
FOA09_RS09340	COG3962	Belongs to the TPP enzyme family
FOA09_RS09345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOA09_RS09350	COG1609	Transcriptional regulator
FOA09_RS09355	COG0481	GTPase activity
FOA09_RS09370	COG0542	response to heat
FOA09_RS09380	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FOA09_RS09385	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOA09_RS09395	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOA09_RS09405	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS09425	COG0017	Asparaginyl-tRNA synthetase
FOA09_RS09430	COG0436	Aminotransferase
FOA09_RS09440	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOA09_RS09440	COG1199	ATP-dependent helicase activity
FOA09_RS09455	COG0531	amino acid
FOA09_RS09465	COG0442	prolyl-tRNA aminoacylation
FOA09_RS09470	COG0750	zinc metalloprotease
FOA09_RS09475	COG1028	Short-chain dehydrogenase reductase Sdr
FOA09_RS09495	COG1074	ATP-dependent DNA helicase activity
FOA09_RS09580	COG0719	Fe-S assembly protein
FOA09_RS09590	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FOA09_RS09595	COG0719	Fe-S assembly protein
FOA09_RS09605	COG0233	cytoplasmic translational termination
FOA09_RS09610	COG0528	UMP kinase activity
FOA09_RS09615	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOA09_RS09620	COG0052	Belongs to the universal ribosomal protein uS2 family
FOA09_RS09630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOA09_RS09635	COG1254	Belongs to the acylphosphatase family
FOA09_RS09640	COG0706	membrane insertase activity
FOA09_RS09650	COG0751	glycine-tRNA ligase activity
FOA09_RS09655	COG0752	glycyl-tRNA synthetase alpha subunit
FOA09_RS09660	COG1381	Involved in DNA repair and RecF pathway recombination
FOA09_RS09665	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOA09_RS09670	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOA09_RS09675	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOA09_RS09685	COG1702	phosphate starvation-inducible protein PhoH
FOA09_RS09690	COG1610	YqeY-like protein
FOA09_RS09695	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOA09_RS09700	COG0735	belongs to the Fur family
FOA09_RS09705	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FOA09_RS09710	COG0083	homoserine kinase activity
FOA09_RS09720	COG0460	homoserine dehydrogenase
FOA09_RS09725	COG0640	Transcriptional regulator
FOA09_RS09730	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOA09_RS09735	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOA09_RS09740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOA09_RS09755	COG0516	GMP reductase activity
FOA09_RS09765	COG0402	S-adenosylhomocysteine deaminase activity
FOA09_RS09780	COG1737	Transcriptional regulator
FOA09_RS09785	COG1263	PTS System
FOA09_RS09785	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS09790	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FOA09_RS09800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS09800	COG1263	PTS System
FOA09_RS09800	COG2190	(PTS) system
FOA09_RS09805	COG1968	undecaprenyl-diphosphatase activity
FOA09_RS09810	COG3394	polysaccharide catabolic process
FOA09_RS09820	COG0306	phosphate transporter
FOA09_RS09825	COG0268	Binds directly to 16S ribosomal RNA
FOA09_RS09830	COG1607	acyl-coa hydrolase
FOA09_RS09835	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOA09_RS09840	COG1466	dna polymerase III delta subunit
FOA09_RS09845	COG2333	competence protein COMEC
FOA09_RS09845	COG0658	competence protein
FOA09_RS09850	COG2131	deaminase
FOA09_RS09855	COG1555	photosystem II stabilization
FOA09_RS09860	COG3480	Lon protease (S16) C-terminal proteolytic domain
FOA09_RS09865	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOA09_RS09870	COG0742	ribosomal rna small subunit methyltransferase
FOA09_RS09875	COG4471	UPF0298 protein
FOA09_RS09890	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FOA09_RS09895	COG0772	Belongs to the SEDS family
FOA09_RS09900	COG4838	Belongs to the UPF0358 family
FOA09_RS09905	COG0514	ATP-dependent DNA helicase (RecQ)
FOA09_RS09910	COG1217	gtp-binding protein TYPA
FOA09_RS09915	COG0483	inositol monophosphate 1-phosphatase activity
FOA09_RS09920	COG4476	Belongs to the UPF0223 family
FOA09_RS09925	COG0038	chloride channel
FOA09_RS09930	COG1215	transferase activity, transferring glycosyl groups
FOA09_RS09960	COG0018	arginyl-trna synthetase
FOA09_RS09965	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOA09_RS09970	COG0456	acetyltransferase
FOA09_RS09980	COG1214	PFAM Peptidase M22, glycoprotease
FOA09_RS10030	COG4589	Belongs to the CDS family
FOA09_RS10035	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOA09_RS10040	COG1464	Belongs to the NlpA lipoprotein family
FOA09_RS10045	COG2011	ABC-type metal ion transport system permease component
FOA09_RS10050	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOA09_RS10055	COG0509	glycine decarboxylation via glycine cleavage system
FOA09_RS10060	COG1393	Belongs to the ArsC family
FOA09_RS10065	COG0772	Belongs to the SEDS family
FOA09_RS10090	COG1396	sequence-specific DNA binding
FOA09_RS10120	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOA09_RS10125	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FOA09_RS10130	COG0009	L-threonylcarbamoyladenylate synthase
FOA09_RS10135	COG2890	protein-(glutamine-N5) methyltransferase activity
FOA09_RS10140	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOA09_RS10145	COG1435	thymidine kinase activity
FOA09_RS10150	COG1053	succinate dehydrogenase
FOA09_RS10155	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOA09_RS10165	COG0493	'glutamate synthase
FOA09_RS10165	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOA09_RS10170	COG0543	2 iron, 2 sulfur cluster binding
FOA09_RS10175	COG0716	FMN binding
FOA09_RS10180	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FOA09_RS10180	COG3608	succinylglutamate desuccinylase aspartoacylase
FOA09_RS10185	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOA09_RS10210	COG0746	molybdenum cofactor guanylyltransferase activity
FOA09_RS10220	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FOA09_RS10220	COG3608	succinylglutamate desuccinylase aspartoacylase
FOA09_RS10235	COG0251	oxidation-reduction process
FOA09_RS10240	COG0549	Belongs to the carbamate kinase family
FOA09_RS10245	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOA09_RS10250	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOA09_RS10265	COG0493	'glutamate synthase
FOA09_RS10265	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOA09_RS10270	COG0402	S-adenosylhomocysteine deaminase activity
FOA09_RS10280	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FOA09_RS10285	COG3442	glutamine amidotransferase
FOA09_RS10290	COG1957	nucleoside hydrolase
FOA09_RS10300	COG1482	cell wall glycoprotein biosynthetic process
FOA09_RS10315	COG1132	(ABC) transporter
FOA09_RS10330	COG0194	GDP metabolic process
FOA09_RS10335	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS10340	COG1263	PTS System
FOA09_RS10340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS10340	COG2190	(PTS) system
FOA09_RS10345	COG3711	transcriptional antiterminator
FOA09_RS10350	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FOA09_RS10355	COG0628	permease
FOA09_RS10370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOA09_RS10375	COG4836	Membrane
FOA09_RS10380	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOA09_RS10385	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FOA09_RS10390	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOA09_RS10395	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOA09_RS10400	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOA09_RS10405	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FOA09_RS10410	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOA09_RS10415	COG0356	it plays a direct role in the translocation of protons across the membrane
FOA09_RS10420	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FOA09_RS10425	COG0557	exoribonuclease II activity
FOA09_RS10435	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOA09_RS10440	COG2388	GCN5-related N-acetyl-transferase
FOA09_RS10445	COG3592	Divergent 4Fe-4S mono-cluster
FOA09_RS10455	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FOA09_RS10460	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOA09_RS10465	COG2246	polysaccharide biosynthetic process
FOA09_RS10470	COG3942	CHAP domain
FOA09_RS10470	COG1705	Flagellar rod assembly protein muramidase FlgJ
FOA09_RS10485	COG0459	protein refolding
FOA09_RS10490	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOA09_RS10505	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
FOA09_RS10510	COG0488	(ABC) transporter
FOA09_RS10520	COG4175	Glycine betaine
FOA09_RS10520	COG3448	diguanylate cyclase activity
FOA09_RS10535	COG1597	lipid kinase activity
FOA09_RS10540	COG3835	regulator
FOA09_RS10545	COG1929	Belongs to the glycerate kinase type-1 family
FOA09_RS10550	COG2610	gluconate transmembrane transporter activity
FOA09_RS10555	COG0398	Pfam SNARE associated Golgi protein
FOA09_RS10560	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FOA09_RS10565	COG1177	transmembrane transport
FOA09_RS10570	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOA09_RS10575	COG3842	ATPase activity
FOA09_RS10585	COG0604	alcohol dehydrogenase
FOA09_RS10595	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOA09_RS10600	COG4684	Psort location CytoplasmicMembrane, score
FOA09_RS10605	COG2348	transferase activity, transferring amino-acyl groups
FOA09_RS10620	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FOA09_RS10630	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FOA09_RS10640	COG3142	Participates in the control of copper homeostasis
FOA09_RS10645	COG2239	Acts as a magnesium transporter
FOA09_RS10650	COG0564	pseudouridine synthase activity
FOA09_RS10655	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FOA09_RS10660	COG2357	RelA SpoT domain protein
FOA09_RS10665	COG4116	CYTH
FOA09_RS10675	COG1164	Oligoendopeptidase f
FOA09_RS10685	COG4862	establishment of competence for transformation
FOA09_RS10690	COG1393	Belongs to the ArsC family
FOA09_RS10695	COG0180	Tryptophanyl-tRNA synthetase
FOA09_RS10700	COG1132	(ABC) transporter
FOA09_RS10745	COG0419	ATPase involved in DNA repair
FOA09_RS10750	COG0420	3'-5' exonuclease activity
FOA09_RS10755	COG0204	Acyl-transferase
FOA09_RS10760	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FOA09_RS10765	COG2827	Endonuclease containing a URI domain
FOA09_RS10770	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOA09_RS10780	COG0494	nUDIX hydrolase
FOA09_RS10790	COG3853	Toxic anion resistance protein (TelA)
FOA09_RS10815	COG1194	a g-specific adenine glycosylase
FOA09_RS10820	COG2137	regulation of response to DNA damage stimulus
FOA09_RS10825	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOA09_RS10830	COG2261	transglycosylase associated protein
FOA09_RS10835	COG3250	beta-galactosidase activity
FOA09_RS10840	COG0531	amino acid
FOA09_RS10845	COG2207	Transcriptional regulator
FOA09_RS10845	COG1917	Cupin 2, conserved barrel domain protein
FOA09_RS10850	COG0222	ribosome binding
FOA09_RS10855	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FOA09_RS10860	COG0081	regulation of translation
FOA09_RS10865	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOA09_RS10870	COG0488	(ABC) transporter
FOA09_RS10875	COG1760	l-serine dehydratase
FOA09_RS10880	COG1760	l-serine dehydratase
FOA09_RS10890	COG1363	Peptidase, m42
FOA09_RS10895	COG4166	transmembrane transport
FOA09_RS10910	COG0250	Participates in transcription elongation, termination and antitermination
FOA09_RS10915	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOA09_RS10920	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOA09_RS10935	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FOA09_RS10945	COG0708	Exodeoxyribonuclease III
FOA09_RS10975	COG0095	Lipoate-protein ligase
FOA09_RS10980	COG1234	tRNA 3'-trailer cleavage
FOA09_RS10990	COG1363	Peptidase, m42
FOA09_RS10995	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FOA09_RS11000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOA09_RS11005	COG1696	Membrane protein involved in D-alanine export
FOA09_RS11010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOA09_RS11020	COG0577	efflux transmembrane transporter activity
FOA09_RS11025	COG1136	(ABC) transporter
FOA09_RS11030	COG1328	CTP reductase activity
FOA09_RS11035	COG0602	queuosine metabolic process
FOA09_RS11055	COG0390	transport system, permease component
FOA09_RS11060	COG4619	ABC transporter
FOA09_RS11070	COG4467	Involved in initiation control of chromosome replication
FOA09_RS11075	COG1774	PSP1 C-terminal conserved region
FOA09_RS11080	COG0470	DNA polymerase III
FOA09_RS11085	COG3870	Protein conserved in bacteria
FOA09_RS11090	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOA09_RS11095	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FOA09_RS11100	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOA09_RS11110	COG1122	ATPase activity
FOA09_RS11125	COG0477	Major facilitator Superfamily
FOA09_RS11130	COG2814	Major facilitator Superfamily
FOA09_RS11135	COG1733	regulation of RNA biosynthetic process
FOA09_RS11140	COG0351	phosphomethylpyrimidine kinase
FOA09_RS11145	COG0352	thiamine-phosphate diphosphorylase activity
FOA09_RS11150	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FOA09_RS11160	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FOA09_RS11165	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOA09_RS11170	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
FOA09_RS11175	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOA09_RS11190	COG3189	MarR family transcriptional regulator
FOA09_RS11195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOA09_RS11200	COG1940	carbohydrate kinase activity
FOA09_RS11215	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOA09_RS11220	COG1073	alpha beta
FOA09_RS11255	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOA09_RS11260	COG0768	penicillin binding
FOA09_RS11265	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOA09_RS11270	COG1942	4-Oxalocrotonate Tautomerase
FOA09_RS11300	COG0217	transcriptional regulatory protein
FOA09_RS11305	COG1323	Belongs to the UPF0348 family
FOA09_RS11310	COG2226	methyltransferase
FOA09_RS11315	COG0799	negative regulation of ribosome biogenesis
FOA09_RS11320	COG1713	HD superfamily hydrolase involved in NAD metabolism
FOA09_RS11325	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FOA09_RS11330	COG1534	Rna-binding protein
FOA09_RS11335	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FOA09_RS11345	COG0825	malonyl-CoA metabolic process
FOA09_RS11350	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FOA09_RS11355	COG0439	Biotin carboxylase
FOA09_RS11360	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOA09_RS11370	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOA09_RS11380	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOA09_RS11395	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOA09_RS11400	COG1846	Transcriptional regulator
FOA09_RS11405	COG4703	Protein of unknown function (DUF1797)
FOA09_RS11410	COG2084	Dehydrogenase
FOA09_RS11415	COG0438	transferase activity, transferring glycosyl groups
FOA09_RS11460	COG1098	S1 RNA binding domain
FOA09_RS11465	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FOA09_RS11480	COG0492	ferredoxin-NADP+ reductase activity
FOA09_RS11490	COG0737	Belongs to the 5'-nucleotidase family
FOA09_RS11510	COG1175	transmembrane transport
FOA09_RS11515	COG3842	ATPase activity
FOA09_RS11520	COG0463	Glycosyl transferase, family 2
FOA09_RS11525	COG4841	protein insertion into membrane
FOA09_RS11530	COG0569	domain protein
FOA09_RS11535	COG2197	response regulator
FOA09_RS11540	COG4585	Histidine kinase
FOA09_RS11550	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOA09_RS11555	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOA09_RS11565	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOA09_RS11570	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FOA09_RS11585	COG2832	Protein of unknown function (DUF454)
FOA09_RS11590	COG5503	Protein of unknown function (DUF1447)
FOA09_RS11600	COG1278	Cold shock
FOA09_RS11630	COG2003	Belongs to the UPF0758 family
FOA09_RS11635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOA09_RS11640	COG0285	dihydrofolate synthase activity
FOA09_RS11655	COG0525	valine-tRNA ligase activity
FOA09_RS11660	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FOA09_RS11665	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
FOA09_RS11670	COG0301	tRNA thio-modification
FOA09_RS11690	COG2252	PERMEase
FOA09_RS11695	COG4221	oxidoreductase activity
FOA09_RS11700	COG0110	maltose O-acetyltransferase activity
FOA09_RS11705	COG0583	DNA-binding transcription factor activity
FOA09_RS11710	COG4975	Glucose uptake
FOA09_RS11715	COG1869	D-ribose catabolic process
FOA09_RS11725	COG1609	Transcriptional regulator
FOA09_RS11730	COG0657	acetylesterase activity
FOA09_RS11745	COG3711	transcriptional antiterminator
FOA09_RS11770	COG1834	amidinotransferase
FOA09_RS11775	COG1785	Belongs to the alkaline phosphatase family
FOA09_RS11780	COG1193	negative regulation of DNA recombination
FOA09_RS11795	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS11800	COG3715	PTS system
FOA09_RS11805	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS11835	COG0577	efflux transmembrane transporter activity
FOA09_RS11840	COG1136	(ABC) transporter
FOA09_RS11845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOA09_RS11855	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOA09_RS11865	COG1937	Protein conserved in bacteria
FOA09_RS11875	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FOA09_RS11880	COG2508	Transcriptional regulator
FOA09_RS11885	COG3257	ureidoglycine aminohydrolase activity
FOA09_RS11890	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOA09_RS11895	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOA09_RS11900	COG1953	Uracil, thiamine, allantoin
FOA09_RS11910	COG1846	Transcriptional regulator
FOA09_RS11920	COG0659	secondary active sulfate transmembrane transporter activity
FOA09_RS11925	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOA09_RS11935	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FOA09_RS11965	COG2508	Transcriptional regulator
FOA09_RS11975	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOA09_RS11980	COG1304	FMN binding
FOA09_RS11995	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOA09_RS12000	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FOA09_RS12035	COG1823	symporter activity
FOA09_RS12040	COG5492	domain, Protein
FOA09_RS12045	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FOA09_RS12050	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOA09_RS12055	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOA09_RS12065	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOA09_RS12070	COG1363	Peptidase, m42
FOA09_RS12080	COG4166	transmembrane transport
FOA09_RS12085	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS12090	COG3715	PTS system
FOA09_RS12095	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FOA09_RS12100	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS12115	COG3394	polysaccharide catabolic process
FOA09_RS12125	COG0519	Catalyzes the synthesis of GMP from XMP
FOA09_RS12155	COG3764	Sortase (surface protein transpeptidase)
FOA09_RS12165	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOA09_RS12190	COG1185	polyribonucleotide nucleotidyltransferase activity
FOA09_RS12195	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOA09_RS12200	COG0242	peptide deformylase activity
FOA09_RS12220	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FOA09_RS12225	COG1268	BioY protein
FOA09_RS12255	COG4493	Belongs to the UPF0637 family
FOA09_RS12265	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOA09_RS12270	COG4166	transmembrane transport
FOA09_RS12275	COG4607	ABC-type enterochelin transport system periplasmic component
FOA09_RS12280	COG4604	ABC transporter, ATP-binding protein
FOA09_RS12285	COG4605	iron ion homeostasis
FOA09_RS12290	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOA09_RS12305	COG2918	glutathione biosynthetic process
FOA09_RS12305	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOA09_RS12315	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FOA09_RS12330	COG0552	protein localization to endoplasmic reticulum
FOA09_RS12335	COG0561	phosphatase activity
FOA09_RS12340	COG1196	nuclear chromosome segregation
FOA09_RS12345	COG0571	ribonuclease III activity
FOA09_RS12360	COG0601	transmembrane transport
FOA09_RS12365	COG4608	Belongs to the ABC transporter superfamily
FOA09_RS12375	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOA09_RS12380	COG0416	fatty acid biosynthetic process
FOA09_RS12385	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOA09_RS12390	COG1461	Dihydroxyacetone kinase
FOA09_RS12400	COG3279	Response regulator of the LytR AlgR family
FOA09_RS12410	COG1668	transmembrane transport
FOA09_RS12415	COG4152	abc transporter atp-binding protein
FOA09_RS12420	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOA09_RS12430	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOA09_RS12435	COG1162	GTPase activity
FOA09_RS12440	COG2815	serine threonine protein kinase
FOA09_RS12440	COG0515	serine threonine protein kinase
FOA09_RS12450	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOA09_RS12450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOA09_RS12455	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOA09_RS12465	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOA09_RS12470	COG1758	RNA polymerase activity
FOA09_RS12475	COG0194	GDP metabolic process
FOA09_RS12505	COG0800	Aldolase
FOA09_RS12510	COG1312	Catalyzes the dehydration of D-mannonate
FOA09_RS12520	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FOA09_RS12525	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS12535	COG0371	Dehydrogenase
FOA09_RS12545	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FOA09_RS12550	COG1737	Transcriptional regulator
FOA09_RS12555	COG1132	(ABC) transporter
FOA09_RS12565	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOA09_RS12570	COG1426	Protein conserved in bacteria
FOA09_RS12575	COG0612	Peptidase, M16
FOA09_RS12580	COG0612	Peptidase, M16
FOA09_RS12585	COG1970	mechanosensitive ion channel activity
FOA09_RS12600	COG2188	Transcriptional regulator
FOA09_RS12605	COG1554	hydrolase, family 65, central catalytic
FOA09_RS12610	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOA09_RS12625	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOA09_RS12635	COG0424	maF-like protein
FOA09_RS12640	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOA09_RS12645	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOA09_RS12650	COG4550	Control of competence regulator ComK, YlbF/YmcA
FOA09_RS12655	COG1692	metallophosphoesterase
FOA09_RS12660	COG1418	mRNA catabolic process
FOA09_RS12670	COG2723	6-phospho-beta-galactosidase activity
FOA09_RS12690	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOA09_RS12695	COG1546	Belongs to the CinA family
FOA09_RS12695	COG1058	Belongs to the CinA family
FOA09_RS12700	COG2433	Pfam Transposase IS66
FOA09_RS12705	COG2910	NAD(P)H-binding
FOA09_RS12710	COG1959	2 iron, 2 sulfur cluster binding
FOA09_RS12725	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOA09_RS12785	COG1335	isochorismatase
FOA09_RS12790	COG1346	cytolysis
FOA09_RS12800	COG3279	Response regulator of the LytR AlgR family
FOA09_RS12805	COG3275	phosphorelay sensor kinase activity
FOA09_RS12815	COG2011	ABC-type metal ion transport system permease component
FOA09_RS12830	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOA09_RS12835	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOA09_RS12850	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOA09_RS12850	COG3443	Belongs to the bacterial solute-binding protein 9 family
FOA09_RS12855	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOA09_RS12860	COG0842	Transport permease protein
FOA09_RS12865	COG1131	(ABC) transporter
FOA09_RS12880	COG3715	PTS system
FOA09_RS12885	COG3716	PTS system mannose fructose sorbose family IID component
FOA09_RS12915	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOA09_RS12935	COG3759	membrane
FOA09_RS12940	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FOA09_RS12945	COG3328	transposase activity
FOA09_RS12955	COG1914	H( )-stimulated, divalent metal cation uptake system
FOA09_RS12960	COG1121	(ABC) transporter
FOA09_RS12965	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FOA09_RS12975	COG1321	iron dependent repressor
FOA09_RS12985	COG2946	Replication initiation factor
FOA09_RS13000	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOA09_RS13005	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FOA09_RS13010	COG0783	Belongs to the Dps family
FOA09_RS13020	COG1070	Carbohydrate kinase
FOA09_RS13025	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FOA09_RS13030	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOA09_RS13035	COG0085	RNA polymerase activity
FOA09_RS13070	COG1316	TRANSCRIPTIONal
FOA09_RS13100	COG1575	Belongs to the MenA family. Type 1 subfamily
FOA09_RS13110	COG4939	FMN-binding domain protein
FOA09_RS13130	COG0142	geranyltranstransferase activity
FOA09_RS13135	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FOA09_RS13140	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOA09_RS13145	COG0302	gtp cyclohydrolase
FOA09_RS13160	COG1476	TRANSCRIPTIONal
FOA09_RS13165	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOA09_RS13200	COG2508	Transcriptional regulator
FOA09_RS13200	COG2508	Transcriptional regulator
FOA09_RS13205	COG0826	peptidase U32
FOA09_RS13210	COG0826	peptidase U32
FOA09_RS13220	COG0542	response to heat
FOA09_RS13225	COG4463	regulation of RNA biosynthetic process
FOA09_RS13230	COG0626	cystathionine gamma-synthase activity
FOA09_RS13235	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FOA09_RS13240	COG1737	Transcriptional regulator
FOA09_RS13310	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOA09_RS13315	COG0517	IMP dehydrogenase activity
FOA09_RS13315	COG0516	GMP reductase activity
FOA09_RS13330	COG0012	GTP binding
FOA09_RS13335	COG4481	Protein conserved in bacteria
FOA09_RS13340	COG1475	DNA binding
FOA09_RS13345	COG1192	Involved in chromosome partitioning
FOA09_RS13350	COG0357	Ribosomal RNA small subunit methyltransferase G
FOA09_RS13375	COG3732	PTS system glucitol sorbitol-specific
FOA09_RS13380	COG3730	PTS system glucitol sorbitol-specific
FOA09_RS13400	COG0445	tRNA wobble uridine modification
FOA09_RS13405	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOA09_RS13445	COG1192	Involved in chromosome partitioning
FOA09_RS13520	COG2184	nucleotidyltransferase activity
FOA09_RS13570	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOA09_RS13710	COG0551	DNA topoisomerase type I activity
FOA09_RS13710	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOA09_RS13715	COG3284	Transcriptional regulator
FOA09_RS13720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOA09_RS13725	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOA09_RS13730	COG0022	dehydrogenase e1 component
FOA09_RS13735	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOA09_RS13740	COG1063	alcohol dehydrogenase
FOA09_RS13780	COG0563	adenylate kinase activity
FOA09_RS13785	COG2217	Heavy metal translocating P-type atpase
FOA09_RS13790	COG2217	Heavy metal translocating P-type atpase
FOA09_RS13800	COG3682	Transcriptional regulator
FOA09_RS13820	COG1388	LysM domain
FOA09_RS13835	COG0745	RESPONSE REGULATOR receiver
FOA09_RS13840	COG2132	Multicopper oxidase
FOA09_RS13860	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins