locus-tag	class	description
EFAU085_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS00010	COG0592	DNA-directed DNA polymerase activity
EFAU085_RS00015	COG2501	S4 domain
EFAU085_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EFAU085_RS00025	COG0187	DNA topoisomerase II activity
EFAU085_RS00035	COG0360	Binds together with S18 to 16S ribosomal RNA
EFAU085_RS00040	COG0629	single-stranded DNA binding
EFAU085_RS00045	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
EFAU085_RS00055	COG0359	binds to the 23S rRNA
EFAU085_RS00060	COG0305	Participates in initiation and elongation during chromosome replication
EFAU085_RS00065	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EFAU085_RS00075	COG0488	(ABC) transporter
EFAU085_RS00085	COG0028	Belongs to the TPP enzyme family
EFAU085_RS00150	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS00160	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS00160	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS00170	COG0519	Catalyzes the synthesis of GMP from XMP
EFAU085_RS00170	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EFAU085_RS00175	COG1072	(Pantothenic acid kinase))
EFAU085_RS00180	COG2813	Specifically methylates the guanine in position
EFAU085_RS00185	COG1609	Transcriptional regulator
EFAU085_RS00190	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
EFAU085_RS00195	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EFAU085_RS00200	COG0295	cytidine deaminase activity
EFAU085_RS00205	COG1744	ABC transporter substrate-binding protein PnrA-like
EFAU085_RS00210	COG3845	ABC transporter
EFAU085_RS00215	COG4603	Belongs to the binding-protein-dependent transport system permease family
EFAU085_RS00220	COG1079	Belongs to the binding-protein-dependent transport system permease family
EFAU085_RS00225	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
EFAU085_RS00235	COG0813	purine-nucleoside phosphorylase activity
EFAU085_RS00240	COG0588	phosphoglycerate mutase activity
EFAU085_RS00250	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
EFAU085_RS00255	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EFAU085_RS00260	COG0049	tRNA binding
EFAU085_RS00265	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EFAU085_RS00270	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EFAU085_RS00275	COG0051	transcription antitermination factor activity, RNA binding
EFAU085_RS00280	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EFAU085_RS00285	COG0088	Forms part of the polypeptide exit tunnel
EFAU085_RS00290	COG0089	rRNA binding
EFAU085_RS00295	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EFAU085_RS00305	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EFAU085_RS00310	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EFAU085_RS00315	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EFAU085_RS00320	COG0255	Belongs to the universal ribosomal protein uL29 family
EFAU085_RS00325	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EFAU085_RS00330	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EFAU085_RS00335	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EFAU085_RS00340	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
EFAU085_RS00345	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EFAU085_RS00350	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EFAU085_RS00355	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EFAU085_RS00360	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EFAU085_RS00365	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EFAU085_RS00370	COG1841	ribosomal large subunit assembly
EFAU085_RS00375	COG0200	Binds to the 23S rRNA
EFAU085_RS00380	COG0201	protein transport
EFAU085_RS00385	COG0563	adenylate kinase activity
EFAU085_RS00390	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EFAU085_RS00395	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EFAU085_RS00400	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EFAU085_RS00405	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EFAU085_RS00410	COG0202	RNA polymerase activity
EFAU085_RS00415	COG0203	ribosomal protein L17
EFAU085_RS00420	COG1122	ATPase activity
EFAU085_RS00425	COG1122	ATPase activity
EFAU085_RS00435	COG0101	tRNA pseudouridine synthase activity
EFAU085_RS00445	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EFAU085_RS00455	COG1461	Dihydroxyacetone kinase
EFAU085_RS00460	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EFAU085_RS00465	COG0416	fatty acid biosynthetic process
EFAU085_RS00470	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EFAU085_RS00480	COG4608	Belongs to the ABC transporter superfamily
EFAU085_RS00485	COG0601	transmembrane transport
EFAU085_RS00500	COG0571	ribonuclease III activity
EFAU085_RS00505	COG1196	nuclear chromosome segregation
EFAU085_RS00510	COG0561	phosphatase activity
EFAU085_RS00515	COG0552	protein localization to endoplasmic reticulum
EFAU085_RS00520	COG2918	glutathione biosynthetic process
EFAU085_RS00520	COG1181	Belongs to the D-alanine--D-alanine ligase family
EFAU085_RS00530	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EFAU085_RS00535	COG4605	iron ion homeostasis
EFAU085_RS00540	COG4604	ABC transporter, ATP-binding protein
EFAU085_RS00545	COG4607	ABC-type enterochelin transport system periplasmic component
EFAU085_RS00585	COG1380	Effector of murein hydrolase LrgA
EFAU085_RS00605	COG1028	Short-chain dehydrogenase reductase Sdr
EFAU085_RS00615	COG1268	BioY protein
EFAU085_RS00620	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EFAU085_RS00635	COG0561	phosphatase activity
EFAU085_RS00640	COG1692	metallophosphoesterase
EFAU085_RS00650	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EFAU085_RS00660	COG0424	maF-like protein
EFAU085_RS00665	COG1263	PTS System
EFAU085_RS00665	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS00670	COG2188	Transcriptional regulator
EFAU085_RS00680	COG0632	four-way junction helicase activity
EFAU085_RS00685	COG2255	four-way junction helicase activity
EFAU085_RS00695	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
EFAU085_RS00705	COG1114	Component of the transport system for branched-chain amino acids
EFAU085_RS00715	COG1113	amino acid transport
EFAU085_RS00720	COG1126	abc transporter atp-binding protein
EFAU085_RS00725	COG0765	amino acid transport
EFAU085_RS00740	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EFAU085_RS00745	COG0110	maltose O-acetyltransferase activity
EFAU085_RS00750	COG1827	regulation of RNA biosynthetic process
EFAU085_RS00755	COG0242	peptide deformylase activity
EFAU085_RS00760	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EFAU085_RS00765	COG1185	polyribonucleotide nucleotidyltransferase activity
EFAU085_RS00775	COG3158	transport of potassium into the cell
EFAU085_RS00780	COG1253	flavin adenine dinucleotide binding
EFAU085_RS00785	COG0534	Mate efflux family protein
EFAU085_RS00795	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
EFAU085_RS00800	COG1187	pseudouridine synthase activity
EFAU085_RS00805	COG1011	Hydrolase
EFAU085_RS00810	COG0572	uridine kinase
EFAU085_RS00815	COG2801	Transposase and inactivated derivatives
EFAU085_RS00835	COG1671	Belongs to the UPF0178 family
EFAU085_RS00845	COG1181	Belongs to the D-alanine--D-alanine ligase family
EFAU085_RS00850	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EFAU085_RS00860	COG0736	holo-[acyl-carrier-protein] synthase activity
EFAU085_RS00865	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EFAU085_RS00870	COG2337	Toxic component of a toxin-antitoxin (TA) module
EFAU085_RS00875	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EFAU085_RS00880	COG0604	alcohol dehydrogenase
EFAU085_RS00880	COG3321	synthase
EFAU085_RS00890	COG0531	amino acid
EFAU085_RS00915	COG1174	glycine betaine transport
EFAU085_RS00935	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
EFAU085_RS00950	COG0343	queuine tRNA-ribosyltransferase activity
EFAU085_RS00955	COG1862	Preprotein translocase
EFAU085_RS00960	COG1012	belongs to the aldehyde dehydrogenase family
EFAU085_RS00960	COG1454	alcohol dehydrogenase
EFAU085_RS00965	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
EFAU085_RS00995	COG2207	Transcriptional regulator
EFAU085_RS00995	COG1917	Cupin 2, conserved barrel domain protein
EFAU085_RS01000	COG1070	Carbohydrate kinase
EFAU085_RS01005	COG4806	L-rhamnose isomerase
EFAU085_RS01010	COG0235	Class ii aldolase
EFAU085_RS01015	COG3254	rhamnose metabolic process
EFAU085_RS01020	COG1454	alcohol dehydrogenase
EFAU085_RS01025	COG1414	Transcriptional regulator
EFAU085_RS01030	COG0800	Aldolase
EFAU085_RS01040	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
EFAU085_RS01045	COG1028	Short-chain dehydrogenase reductase Sdr
EFAU085_RS01050	COG1304	FMN binding
EFAU085_RS01065	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
EFAU085_RS01070	COG1428	Deoxynucleoside kinase
EFAU085_RS01085	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EFAU085_RS01090	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EFAU085_RS01095	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EFAU085_RS01125	COG0824	Thioesterase
EFAU085_RS01130	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EFAU085_RS01150	COG1363	Peptidase, m42
EFAU085_RS01155	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EFAU085_RS01160	COG0589	response to stress
EFAU085_RS01165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EFAU085_RS01170	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EFAU085_RS01175	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EFAU085_RS01220	COG1368	sulfuric ester hydrolase activity
EFAU085_RS01230	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
EFAU085_RS01240	COG0101	tRNA pseudouridine synthase activity
EFAU085_RS01265	COG0667	Aldo Keto reductase
EFAU085_RS01270	COG2186	Transcriptional regulator
EFAU085_RS01275	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS01280	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS01290	COG1447	Phosphotransferase system cellobiose-specific component IIA
EFAU085_RS01295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS01310	COG1063	alcohol dehydrogenase
EFAU085_RS01320	COG4716	Myosin-crossreactive antigen
EFAU085_RS01390	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EFAU085_RS01400	COG3052	prosthetic group binding
EFAU085_RS01460	COG1051	belongs to the nudix hydrolase family
EFAU085_RS01465	COG1846	Transcriptional regulator
EFAU085_RS01490	COG2252	PERMEase
EFAU085_RS01495	COG0366	Alpha amylase catalytic
EFAU085_RS01500	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS01510	COG2190	(PTS) system
EFAU085_RS01510	COG1263	PTS System
EFAU085_RS01510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS01515	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS01525	COG1902	pentaerythritol trinitrate reductase activity
EFAU085_RS01535	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS01545	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
EFAU085_RS01550	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
EFAU085_RS01555	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
EFAU085_RS01560	COG1193	negative regulation of DNA recombination
EFAU085_RS01565	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EFAU085_RS01575	COG1937	Protein conserved in bacteria
EFAU085_RS01580	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
EFAU085_RS01585	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS01615	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
EFAU085_RS01620	COG2376	Dihydroxyacetone kinase
EFAU085_RS01625	COG1461	Dihydroxyacetone kinase
EFAU085_RS01635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EFAU085_RS01670	COG0531	amino acid
EFAU085_RS01675	COG1757	Na H antiporter
EFAU085_RS01680	COG1609	Transcriptional regulator
EFAU085_RS01690	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS01700	COG1263	PTS System
EFAU085_RS01700	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS01700	COG2190	(PTS) system
EFAU085_RS01725	COG3479	Phenolic acid decarboxylase
EFAU085_RS01730	COG1695	Transcriptional regulator
EFAU085_RS01740	COG2814	Major facilitator Superfamily
EFAU085_RS01760	COG0163	prenyltransferase activity
EFAU085_RS01765	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
EFAU085_RS01775	COG1136	(ABC) transporter
EFAU085_RS01775	COG0577	efflux transmembrane transporter activity
EFAU085_RS01795	COG1811	Na channel or pump
EFAU085_RS01830	COG1136	(ABC) transporter
EFAU085_RS01845	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS01845	COG3942	CHAP domain
EFAU085_RS01850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS01850	COG2190	(PTS) system
EFAU085_RS01850	COG1263	PTS System
EFAU085_RS01855	COG1869	D-ribose catabolic process
EFAU085_RS01865	COG1609	Transcriptional regulator
EFAU085_RS01885	COG0366	Alpha amylase catalytic
EFAU085_RS01890	COG0628	permease
EFAU085_RS01895	COG0803	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS01895	COG3443	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS01920	COG1428	Deoxynucleoside kinase
EFAU085_RS01930	COG0210	DNA helicase
EFAU085_RS01935	COG1393	Belongs to the ArsC family
EFAU085_RS01940	COG1393	Belongs to the ArsC family
EFAU085_RS01960	COG0386	Belongs to the glutathione peroxidase family
EFAU085_RS01965	COG1854	S-ribosylhomocysteine lyase activity
EFAU085_RS01970	COG0626	cystathionine gamma-synthase activity
EFAU085_RS01975	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EFAU085_RS01980	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EFAU085_RS01990	COG0019	diaminopimelate decarboxylase activity
EFAU085_RS01995	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
EFAU085_RS02005	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EFAU085_RS02010	COG2171	N-acyltransferase activity
EFAU085_RS02015	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EFAU085_RS02020	COG0527	aspartate kinase activity
EFAU085_RS02025	COG1473	amidohydrolase
EFAU085_RS02030	COG0436	Aminotransferase
EFAU085_RS02035	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS02040	COG2801	Transposase and inactivated derivatives
EFAU085_RS02055	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EFAU085_RS02060	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
EFAU085_RS02075	COG2207	Transcriptional regulator
EFAU085_RS02080	COG2249	NAD(P)H dehydrogenase (quinone) activity
EFAU085_RS02095	COG1113	amino acid transport
EFAU085_RS02100	COG1121	(ABC) transporter
EFAU085_RS02105	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EFAU085_RS02120	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EFAU085_RS02125	COG2823	Periplasmic or secreted lipoprotein
EFAU085_RS02125	COG1652	LysM domain
EFAU085_RS02135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EFAU085_RS02140	COG0477	Major facilitator Superfamily
EFAU085_RS02150	COG1438	arginine binding
EFAU085_RS02165	COG1764	response to oxidative stress
EFAU085_RS02170	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EFAU085_RS02175	COG1335	isochorismatase
EFAU085_RS02185	COG2135	peptidase activity
EFAU085_RS02220	COG3546	catalase activity
EFAU085_RS02230	COG1175	transmembrane transport
EFAU085_RS02235	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS02270	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS02275	COG2205	protein histidine kinase activity
EFAU085_RS02280	COG4975	Glucose uptake
EFAU085_RS02285	COG0531	amino acid
EFAU085_RS02290	COG3853	Toxic anion resistance protein (TelA)
EFAU085_RS02310	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EFAU085_RS02315	COG1335	isochorismatase
EFAU085_RS02325	COG3590	peptidase
EFAU085_RS02335	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EFAU085_RS02340	COG1104	cysteine desulfurase activity
EFAU085_RS02360	COG0482	sulfurtransferase activity
EFAU085_RS02370	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EFAU085_RS02375	COG2814	Major facilitator Superfamily
EFAU085_RS02395	COG0463	Glycosyl transferase, family 2
EFAU085_RS02400	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EFAU085_RS02405	COG2855	membrane
EFAU085_RS02415	COG0583	DNA-binding transcription factor activity
EFAU085_RS02420	COG0772	Belongs to the SEDS family
EFAU085_RS02425	COG1393	Belongs to the ArsC family
EFAU085_RS02430	COG0509	glycine decarboxylation via glycine cleavage system
EFAU085_RS02435	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EFAU085_RS02440	COG2011	ABC-type metal ion transport system permease component
EFAU085_RS02445	COG1464	Belongs to the NlpA lipoprotein family
EFAU085_RS02455	COG0719	Fe-S assembly protein
EFAU085_RS02460	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EFAU085_RS02470	COG0719	Fe-S assembly protein
EFAU085_RS02515	COG2190	(PTS) system
EFAU085_RS02515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS02515	COG1263	PTS System
EFAU085_RS02520	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS02525	COG3711	transcriptional antiterminator
EFAU085_RS02565	COG0577	efflux transmembrane transporter activity
EFAU085_RS02565	COG1136	(ABC) transporter
EFAU085_RS02575	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EFAU085_RS02590	COG1674	ftsk spoiiie
EFAU085_RS02600	COG2946	Replication initiation factor
EFAU085_RS02640	COG0741	lytic transglycosylase activity
EFAU085_RS02640	COG0791	NLP P60 protein
EFAU085_RS02675	COG0582	viral genome integration into host DNA
EFAU085_RS02685	COG3764	Sortase (surface protein transpeptidase)
EFAU085_RS02695	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS02695	COG2190	(PTS) system
EFAU085_RS02695	COG1263	PTS System
EFAU085_RS02700	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS02705	COG2188	Transcriptional regulator
EFAU085_RS02720	COG1611	Belongs to the LOG family
EFAU085_RS02730	COG1428	Deoxynucleoside kinase
EFAU085_RS02750	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS02760	COG1368	sulfuric ester hydrolase activity
EFAU085_RS02770	COG0105	UTP biosynthetic process
EFAU085_RS02775	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EFAU085_RS02780	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS02785	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EFAU085_RS02790	COG2011	ABC-type metal ion transport system permease component
EFAU085_RS02795	COG1464	Belongs to the NlpA lipoprotein family
EFAU085_RS02805	COG1757	Na H antiporter
EFAU085_RS02815	COG1113	amino acid transport
EFAU085_RS02825	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
EFAU085_RS02830	COG1929	Belongs to the glycerate kinase type-1 family
EFAU085_RS02835	COG0488	(ABC) transporter
EFAU085_RS02850	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
EFAU085_RS02855	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS02855	COG1263	PTS System
EFAU085_RS02870	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
EFAU085_RS02875	COG1131	(ABC) transporter
EFAU085_RS02895	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
EFAU085_RS02910	COG0346	lactoylglutathione lyase activity
EFAU085_RS02935	COG0561	phosphatase activity
EFAU085_RS02940	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
EFAU085_RS02945	COG0280	phosphate acetyltransferase
EFAU085_RS02950	COG0802	atpase or kinase
EFAU085_RS02955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EFAU085_RS02965	COG0708	Exodeoxyribonuclease III
EFAU085_RS02975	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EFAU085_RS03005	COG1053	succinate dehydrogenase
EFAU085_RS03010	COG1028	Short-chain dehydrogenase reductase Sdr
EFAU085_RS03010	COG3321	synthase
EFAU085_RS03010	COG0604	alcohol dehydrogenase
EFAU085_RS03015	COG0702	epimerase
EFAU085_RS03020	COG4684	Psort location CytoplasmicMembrane, score
EFAU085_RS03025	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EFAU085_RS03030	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EFAU085_RS03035	COG0604	alcohol dehydrogenase
EFAU085_RS03045	COG3842	ATPase activity
EFAU085_RS03050	COG1176	ABC-type spermidine putrescine transport system, permease component I
EFAU085_RS03055	COG1177	transmembrane transport
EFAU085_RS03060	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EFAU085_RS03065	COG3829	transcription factor binding
EFAU085_RS03080	COG3715	PTS system
EFAU085_RS03085	COG3716	PTS system mannose fructose sorbose family IID component
EFAU085_RS03100	COG1940	carbohydrate kinase activity
EFAU085_RS03125	COG0582	viral genome integration into host DNA
EFAU085_RS03130	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
EFAU085_RS03140	COG0789	Transcriptional regulator
EFAU085_RS03155	COG0504	CTP synthase activity
EFAU085_RS03165	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EFAU085_RS03170	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EFAU085_RS03175	COG0254	rRNA binding
EFAU085_RS03195	COG1349	DNA-binding transcription factor activity
EFAU085_RS03205	COG2814	Major facilitator Superfamily
EFAU085_RS03215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EFAU085_RS03235	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EFAU085_RS03240	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EFAU085_RS03245	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EFAU085_RS03250	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EFAU085_RS03255	COG3870	Protein conserved in bacteria
EFAU085_RS03260	COG0470	DNA polymerase III
EFAU085_RS03265	COG1774	PSP1 C-terminal conserved region
EFAU085_RS03270	COG4467	Involved in initiation control of chromosome replication
EFAU085_RS03285	COG0602	queuosine metabolic process
EFAU085_RS03290	COG1328	CTP reductase activity
EFAU085_RS03295	COG1136	(ABC) transporter
EFAU085_RS03300	COG0577	efflux transmembrane transporter activity
EFAU085_RS03310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
EFAU085_RS03315	COG1696	Membrane protein involved in D-alanine export
EFAU085_RS03320	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EFAU085_RS03325	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
EFAU085_RS03330	COG1363	Peptidase, m42
EFAU085_RS03340	COG1234	tRNA 3'-trailer cleavage
EFAU085_RS03345	COG0095	Lipoate-protein ligase
EFAU085_RS03365	COG3547	Transposase (IS116 IS110 IS902 family)
EFAU085_RS03415	COG2203	Gaf domain
EFAU085_RS03415	COG3706	GGDEF domain
EFAU085_RS03415	COG4251	negative regulation of phosphorylation
EFAU085_RS03415	COG5001	Diguanylate cyclase
EFAU085_RS03420	COG1283	sodium-dependent phosphate transmembrane transporter activity
EFAU085_RS03530	COG0741	lytic transglycosylase activity
EFAU085_RS03530	COG0791	NLP P60 protein
EFAU085_RS03545	COG0551	DNA topoisomerase type I activity
EFAU085_RS03545	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EFAU085_RS03595	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS03600	COG5002	protein histidine kinase activity
EFAU085_RS03605	COG1876	peptidase activity
EFAU085_RS03610	COG2720	vancomycin resistance protein
EFAU085_RS03615	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EFAU085_RS03620	COG1181	Belongs to the D-alanine--D-alanine ligase family
EFAU085_RS03625	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
EFAU085_RS03630	COG2801	Transposase and inactivated derivatives
EFAU085_RS03635	COG2963	transposase activity
EFAU085_RS03675	COG3759	membrane
EFAU085_RS03680	COG0659	secondary active sulfate transmembrane transporter activity
EFAU085_RS03690	COG0261	This protein binds to 23S rRNA in the presence of protein L20
EFAU085_RS03700	COG0211	Belongs to the bacterial ribosomal protein bL27 family
EFAU085_RS03825	COG3422	double-strand break repair
EFAU085_RS03865	COG0740	serine-type endopeptidase activity
EFAU085_RS03960	COG2801	Transposase and inactivated derivatives
EFAU085_RS03990	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EFAU085_RS03990	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EFAU085_RS03995	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS03995	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS04005	COG3715	PTS system
EFAU085_RS04020	COG2261	transglycosylase associated protein
EFAU085_RS04025	COG0006	proline dipeptidase activity
EFAU085_RS04030	COG1302	Protein conserved in bacteria
EFAU085_RS04035	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EFAU085_RS04040	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EFAU085_RS04045	COG1570	exodeoxyribonuclease VII activity
EFAU085_RS04050	COG1722	exodeoxyribonuclease VII activity
EFAU085_RS04060	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
EFAU085_RS04065	COG1438	arginine binding
EFAU085_RS04070	COG0497	DNA recombination
EFAU085_RS04105	COG0768	penicillin binding
EFAU085_RS04140	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EFAU085_RS04150	COG2302	S4 RNA-binding domain
EFAU085_RS04155	COG3599	regulation of cell shape
EFAU085_RS04160	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EFAU085_RS04165	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EFAU085_RS04185	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS04190	COG0513	Belongs to the DEAD box helicase family
EFAU085_RS04195	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EFAU085_RS04195	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EFAU085_RS04200	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS04205	COG1447	Phosphotransferase system cellobiose-specific component IIA
EFAU085_RS04210	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS04270	COG1396	sequence-specific DNA binding
EFAU085_RS04525	COG2309	aminopeptidase activity
EFAU085_RS04535	COG0716	FMN binding
EFAU085_RS04540	COG0024	Methionine aminopeptidase
EFAU085_RS04545	COG1295	ribonuclease BN
EFAU085_RS04550	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EFAU085_RS04565	COG1215	transferase activity, transferring glycosyl groups
EFAU085_RS04570	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
EFAU085_RS04580	COG1088	dTDP-glucose 4,6-dehydratase activity
EFAU085_RS04585	COG1091	dTDP-4-dehydrorhamnose reductase activity
EFAU085_RS04600	COG1682	transport, permease protein
EFAU085_RS04610	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EFAU085_RS04615	COG0438	transferase activity, transferring glycosyl groups
EFAU085_RS04615	COG1216	Glycosyl transferase, family 2
EFAU085_RS04630	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
EFAU085_RS04635	COG0463	Glycosyl transferase, family 2
EFAU085_RS04640	COG0438	transferase activity, transferring glycosyl groups
EFAU085_RS04675	COG2089	acid synthase
EFAU085_RS04680	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
EFAU085_RS04690	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EFAU085_RS04750	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EFAU085_RS04755	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EFAU085_RS04765	COG4585	Histidine kinase
EFAU085_RS04775	COG0569	domain protein
EFAU085_RS04810	COG2246	polysaccharide biosynthetic process
EFAU085_RS04815	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EFAU085_RS04830	COG1316	TRANSCRIPTIONal
EFAU085_RS04835	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
EFAU085_RS04840	COG3397	chitin binding
EFAU085_RS04845	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EFAU085_RS04850	COG2137	regulation of response to DNA damage stimulus
EFAU085_RS04855	COG1194	a g-specific adenine glycosylase
EFAU085_RS04860	COG3557	Belongs to the UPF0374 family
EFAU085_RS04870	COG0628	permease
EFAU085_RS04875	COG1253	flavin adenine dinucleotide binding
EFAU085_RS04880	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
EFAU085_RS04895	COG0542	response to heat
EFAU085_RS04900	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS04905	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EFAU085_RS04915	COG0438	transferase activity, transferring glycosyl groups
EFAU085_RS04920	COG2084	Dehydrogenase
EFAU085_RS04925	COG4703	Protein of unknown function (DUF1797)
EFAU085_RS04930	COG0322	excinuclease ABC activity
EFAU085_RS04935	COG1846	Transcriptional regulator
EFAU085_RS04940	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EFAU085_RS04950	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EFAU085_RS04960	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EFAU085_RS04970	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EFAU085_RS04975	COG0439	Biotin carboxylase
EFAU085_RS04980	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
EFAU085_RS04985	COG0825	malonyl-CoA metabolic process
EFAU085_RS04990	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
EFAU085_RS04995	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
EFAU085_RS05000	COG1534	Rna-binding protein
EFAU085_RS05005	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EFAU085_RS05010	COG1713	HD superfamily hydrolase involved in NAD metabolism
EFAU085_RS05015	COG0799	negative regulation of ribosome biogenesis
EFAU085_RS05020	COG2226	methyltransferase
EFAU085_RS05025	COG1323	Belongs to the UPF0348 family
EFAU085_RS05030	COG0217	transcriptional regulatory protein
EFAU085_RS05040	COG3973	AAA domain
EFAU085_RS05045	COG2217	Heavy metal translocating P-type atpase
EFAU085_RS05050	COG1942	4-Oxalocrotonate Tautomerase
EFAU085_RS05055	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EFAU085_RS05060	COG1737	Transcriptional regulator
EFAU085_RS05065	COG0768	penicillin binding
EFAU085_RS05070	COG0561	phosphatase activity
EFAU085_RS05075	COG2252	PERMEase
EFAU085_RS05080	COG2814	Major facilitator Superfamily
EFAU085_RS05090	COG0587	DNA-directed DNA polymerase activity
EFAU085_RS05095	COG0205	6-phosphofructokinase activity
EFAU085_RS05105	COG0583	DNA-binding transcription factor activity
EFAU085_RS05115	COG0333	Belongs to the bacterial ribosomal protein bL32 family
EFAU085_RS05125	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
EFAU085_RS05130	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS05135	COG5002	protein histidine kinase activity
EFAU085_RS05285	COG3711	transcriptional antiterminator
EFAU085_RS05295	COG1263	PTS System
EFAU085_RS05295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS05295	COG2190	(PTS) system
EFAU085_RS05300	COG1486	melibiose metabolic process
EFAU085_RS05305	COG2190	(PTS) system
EFAU085_RS05305	COG1263	PTS System
EFAU085_RS05305	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS05310	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS05330	COG1349	DNA-binding transcription factor activity
EFAU085_RS05355	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
EFAU085_RS05360	COG3623	hexulose-6-phosphate isomerase
EFAU085_RS05370	COG0456	acetyltransferase
EFAU085_RS05390	COG3711	transcriptional antiterminator
EFAU085_RS05410	COG3775	system Galactitol-specific IIC component
EFAU085_RS05425	COG0400	carboxylic ester hydrolase activity
EFAU085_RS05430	COG0346	lactoylglutathione lyase activity
EFAU085_RS05440	COG2188	Transcriptional regulator
EFAU085_RS05445	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS05450	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS05455	COG0589	response to stress
EFAU085_RS05470	COG1393	Belongs to the ArsC family
EFAU085_RS05480	COG0351	phosphomethylpyrimidine kinase
EFAU085_RS05485	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EFAU085_RS05490	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EFAU085_RS05500	COG3425	synthase
EFAU085_RS05505	COG0183	Belongs to the thiolase family
EFAU085_RS05530	COG0656	L-ascorbic acid biosynthetic process
EFAU085_RS05550	COG0392	lysyltransferase activity
EFAU085_RS05550	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EFAU085_RS05555	COG0596	Alpha beta hydrolase
EFAU085_RS05560	COG0741	lytic transglycosylase activity
EFAU085_RS05570	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EFAU085_RS05575	COG0358	DNA primase activity
EFAU085_RS05580	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EFAU085_RS05590	COG2996	Protein conserved in bacteria
EFAU085_RS05595	COG0735	belongs to the Fur family
EFAU085_RS05605	COG4974	Belongs to the 'phage' integrase family
EFAU085_RS05615	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EFAU085_RS05620	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EFAU085_RS05625	COG1187	pseudouridine synthase activity
EFAU085_RS05630	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EFAU085_RS05635	COG1288	antiporter activity
EFAU085_RS05640	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EFAU085_RS05660	COG0514	ATP-dependent DNA helicase (RecQ)
EFAU085_RS05670	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EFAU085_RS05675	COG0539	negative regulation of cytoplasmic translation
EFAU085_RS05680	COG1160	GTP binding
EFAU085_RS05685	COG0776	regulation of translation
EFAU085_RS05700	COG0457	Tetratricopeptide repeat
EFAU085_RS05705	COG5582	Belongs to the UPF0302 family
EFAU085_RS05710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EFAU085_RS05715	COG1694	Mazg nucleotide pyrophosphohydrolase
EFAU085_RS05720	COG0617	tRNA 3'-terminal CCA addition
EFAU085_RS05740	COG0025	NhaP-type Na H and K H
EFAU085_RS05745	COG0488	(ABC) transporter
EFAU085_RS05750	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
EFAU085_RS05760	COG1272	protein, Hemolysin III
EFAU085_RS05765	COG1307	EDD domain protein, DegV family
EFAU085_RS05770	COG2755	lipolytic protein G-D-S-L family
EFAU085_RS05775	COG4698	Protein conserved in bacteria
EFAU085_RS05785	COG4479	Belongs to the UPF0346 family
EFAU085_RS05790	COG0681	Belongs to the peptidase S26 family
EFAU085_RS05805	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
EFAU085_RS05810	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EFAU085_RS05815	COG0758	DNA mediated transformation
EFAU085_RS05820	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EFAU085_RS05825	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
EFAU085_RS05830	COG4974	Belongs to the 'phage' integrase family
EFAU085_RS05835	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
EFAU085_RS05840	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
EFAU085_RS05860	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
EFAU085_RS05865	COG1832	CoA-binding protein
EFAU085_RS05870	COG0187	DNA topoisomerase II activity
EFAU085_RS05880	COG1882	Formate acetyltransferase
EFAU085_RS05885	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EFAU085_RS05890	COG1227	inorganic diphosphatase activity
EFAU085_RS05905	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
EFAU085_RS05915	COG1073	alpha beta
EFAU085_RS05930	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EFAU085_RS05945	COG1732	Glycine betaine
EFAU085_RS05960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EFAU085_RS05970	COG1116	anion transmembrane transporter activity
EFAU085_RS05980	COG0084	hydrolase, TatD family'
EFAU085_RS06005	COG3328	transposase activity
EFAU085_RS06010	COG3328	transposase activity
EFAU085_RS06040	COG0436	Aminotransferase
EFAU085_RS06060	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EFAU085_RS06065	COG4565	transcriptional regulatory protein
EFAU085_RS06070	COG3290	protein histidine kinase activity
EFAU085_RS06075	COG3290	protein histidine kinase activity
EFAU085_RS06085	COG2268	Band 7 protein
EFAU085_RS06100	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS06110	COG1876	peptidase activity
EFAU085_RS06115	COG1388	LysM domain
EFAU085_RS06115	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS06125	COG1653	transport
EFAU085_RS06130	COG1175	transmembrane transport
EFAU085_RS06135	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS06145	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS06150	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EFAU085_RS06155	COG2233	PERMEase
EFAU085_RS06160	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
EFAU085_RS06165	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EFAU085_RS06170	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EFAU085_RS06185	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
EFAU085_RS06190	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EFAU085_RS06195	COG0047	phosphoribosylformylglycinamidine synthase activity
EFAU085_RS06200	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EFAU085_RS06210	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
EFAU085_RS06215	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EFAU085_RS06220	COG0138	bifunctional purine biosynthesis protein purh
EFAU085_RS06225	COG0151	Belongs to the GarS family
EFAU085_RS06230	COG4989	oxidoreductase activity
EFAU085_RS06240	COG2972	Histidine kinase
EFAU085_RS06250	COG4213	ABC transporter substrate-binding protein
EFAU085_RS06260	COG4214	carbohydrate transport
EFAU085_RS06265	COG0516	GMP reductase activity
EFAU085_RS06270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EFAU085_RS06280	COG0022	dehydrogenase e1 component
EFAU085_RS06295	COG4476	Belongs to the UPF0223 family
EFAU085_RS06300	COG0483	inositol monophosphate 1-phosphatase activity
EFAU085_RS06305	COG1217	gtp-binding protein TYPA
EFAU085_RS06310	COG0514	ATP-dependent DNA helicase (RecQ)
EFAU085_RS06315	COG4838	Belongs to the UPF0358 family
EFAU085_RS06320	COG0772	Belongs to the SEDS family
EFAU085_RS06325	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
EFAU085_RS06340	COG4471	UPF0298 protein
EFAU085_RS06345	COG0742	ribosomal rna small subunit methyltransferase
EFAU085_RS06350	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EFAU085_RS06355	COG3480	Lon protease (S16) C-terminal proteolytic domain
EFAU085_RS06360	COG1596	polysaccharide export
EFAU085_RS06360	COG1555	photosystem II stabilization
EFAU085_RS06375	COG2131	deaminase
EFAU085_RS06380	COG0658	competence protein
EFAU085_RS06380	COG2333	competence protein COMEC
EFAU085_RS06385	COG1466	dna polymerase III delta subunit
EFAU085_RS06390	COG0268	Binds directly to 16S ribosomal RNA
EFAU085_RS06400	COG2707	UPF0756 membrane protein
EFAU085_RS06405	COG2217	Heavy metal translocating P-type atpase
EFAU085_RS06410	COG1968	undecaprenyl-diphosphatase activity
EFAU085_RS06430	COG1666	GTP binding
EFAU085_RS06435	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EFAU085_RS06440	COG2151	metal-sulfur cluster biosynthetic enzyme
EFAU085_RS06455	COG1388	LysM domain
EFAU085_RS06455	COG3942	CHAP domain
EFAU085_RS06510	COG4990	cell redox homeostasis
EFAU085_RS06530	COG3104	oligopeptide transport
EFAU085_RS06540	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
EFAU085_RS06545	COG1074	ATP-dependent DNA helicase activity
EFAU085_RS06550	COG1733	regulation of RNA biosynthetic process
EFAU085_RS06555	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EFAU085_RS06560	COG0072	phenylalanine-tRNA ligase activity
EFAU085_RS06560	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EFAU085_RS06570	COG1126	abc transporter atp-binding protein
EFAU085_RS06575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EFAU085_RS06580	COG0765	amino acid transport
EFAU085_RS06585	COG0765	amino acid transport
EFAU085_RS06590	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
EFAU085_RS06595	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
EFAU085_RS06605	COG0517	IMP dehydrogenase activity
EFAU085_RS06610	COG0668	transmembrane transport
EFAU085_RS06615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EFAU085_RS06620	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
EFAU085_RS06625	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EFAU085_RS06655	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EFAU085_RS06665	COG1234	tRNA 3'-trailer cleavage
EFAU085_RS06670	COG0300	oxidoreductase activity
EFAU085_RS06675	COG5416	Lipopolysaccharide assembly protein A domain
EFAU085_RS06680	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EFAU085_RS06680	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
EFAU085_RS06685	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EFAU085_RS06695	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EFAU085_RS06710	COG2826	transposase and inactivated derivatives, IS30 family
EFAU085_RS06715	COG1388	LysM domain
EFAU085_RS06715	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS06720	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EFAU085_RS06725	COG0735	belongs to the Fur family
EFAU085_RS06730	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS06740	COG1846	Transcriptional regulator
EFAU085_RS06750	COG3935	DnaD domain protein
EFAU085_RS06755	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EFAU085_RS06760	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
EFAU085_RS06765	COG3331	DNA recombination
EFAU085_RS06770	COG4474	Belongs to the UPF0398 family
EFAU085_RS06775	COG3599	regulation of cell shape
EFAU085_RS06780	COG0116	Belongs to the methyltransferase superfamily
EFAU085_RS06785	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
EFAU085_RS06790	COG1418	mRNA catabolic process
EFAU085_RS06795	COG0156	8-amino-7-oxononanoate synthase activity
EFAU085_RS06800	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EFAU085_RS06805	COG0531	amino acid
EFAU085_RS06820	COG0513	Belongs to the DEAD box helicase family
EFAU085_RS06825	COG2153	protein acetylation
EFAU085_RS06835	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EFAU085_RS06840	COG4684	Psort location CytoplasmicMembrane, score
EFAU085_RS06850	COG0328	RNA-DNA hybrid ribonuclease activity
EFAU085_RS06860	COG1278	Cold shock
EFAU085_RS06865	COG2759	Belongs to the formate--tetrahydrofolate ligase family
EFAU085_RS06880	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EFAU085_RS06885	COG0564	pseudouridine synthase activity
EFAU085_RS06895	COG2233	PERMEase
EFAU085_RS06900	COG0540	Belongs to the ATCase OTCase family
EFAU085_RS06905	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EFAU085_RS06910	COG0505	Belongs to the CarA family
EFAU085_RS06915	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EFAU085_RS06920	COG0543	2 iron, 2 sulfur cluster binding
EFAU085_RS06930	COG0284	orotidine-5'-phosphate decarboxylase activity
EFAU085_RS06960	COG1293	RNA-binding protein homologous to eukaryotic snRNP
EFAU085_RS06980	COG4120	Belongs to the binding-protein-dependent transport system permease family
EFAU085_RS06990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
EFAU085_RS07025	COG0039	L-malate dehydrogenase activity
EFAU085_RS07045	COG3037	sugar-specific permease SgaT UlaA
EFAU085_RS07055	COG3711	transcriptional antiterminator
EFAU085_RS07065	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS07115	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS07120	COG5002	protein histidine kinase activity
EFAU085_RS07125	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
EFAU085_RS07145	COG0318	PFAM AMP-dependent synthetase and ligase
EFAU085_RS07150	COG0351	phosphomethylpyrimidine kinase
EFAU085_RS07160	COG4475	Protein of unknown function (DUF436)
EFAU085_RS07165	COG0366	Alpha amylase catalytic
EFAU085_RS07180	COG1307	EDD domain protein, DegV family
EFAU085_RS07185	COG2244	polysaccharide biosynthetic process
EFAU085_RS07235	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
EFAU085_RS07240	COG0194	GDP metabolic process
EFAU085_RS07260	COG0765	amino acid transport
EFAU085_RS07265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EFAU085_RS07275	COG0167	dihydroorotate dehydrogenase activity
EFAU085_RS07295	COG3833	ABC-type maltose transport systems, permease component
EFAU085_RS07300	COG1175	transmembrane transport
EFAU085_RS07305	COG2182	Extracellular solute-binding protein
EFAU085_RS07315	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EFAU085_RS07325	COG1764	response to oxidative stress
EFAU085_RS07330	COG1846	Transcriptional regulator
EFAU085_RS07335	COG0628	permease
EFAU085_RS07355	COG1312	Catalyzes the dehydration of D-mannonate
EFAU085_RS07360	COG0246	Mannitol dehydrogenase
EFAU085_RS07370	COG0450	alkyl hydroperoxide reductase
EFAU085_RS07415	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EFAU085_RS07430	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EFAU085_RS07445	COG0531	amino acid
EFAU085_RS07460	COG2946	Replication initiation factor
EFAU085_RS07475	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
EFAU085_RS07490	COG0531	amino acid
EFAU085_RS07495	COG0004	ammonium transporteR
EFAU085_RS07500	COG2261	transglycosylase associated protein
EFAU085_RS07530	COG3655	Transcriptional regulator
EFAU085_RS07540	COG2261	transglycosylase associated protein
EFAU085_RS07560	COG1028	Short-chain dehydrogenase reductase Sdr
EFAU085_RS07575	COG1442	glycosyl transferase family 8
EFAU085_RS07580	COG1442	glycosyl transferase family 8
EFAU085_RS07585	COG0561	phosphatase activity
EFAU085_RS07610	COG1476	TRANSCRIPTIONal
EFAU085_RS07630	COG1278	Cold shock
EFAU085_RS07645	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS07650	COG1312	Catalyzes the dehydration of D-mannonate
EFAU085_RS07670	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS07675	COG3716	PTS system mannose fructose sorbose family IID component
EFAU085_RS07685	COG0371	Dehydrogenase
EFAU085_RS07700	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
EFAU085_RS07710	COG0837	glucose binding
EFAU085_RS07710	COG1737	Transcriptional regulator
EFAU085_RS07720	COG2272	Belongs to the type-B carboxylesterase lipase family
EFAU085_RS07725	COG1073	alpha beta
EFAU085_RS07760	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EFAU085_RS07780	COG3732	PTS system glucitol sorbitol-specific
EFAU085_RS07785	COG3730	PTS system glucitol sorbitol-specific
EFAU085_RS07795	COG3711	transcriptional antiterminator
EFAU085_RS07795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS07835	COG4974	Belongs to the 'phage' integrase family
EFAU085_RS07875	COG2211	Major facilitator Superfamily
EFAU085_RS07885	COG1904	glucuronate isomerase
EFAU085_RS07890	COG1312	Catalyzes the dehydration of D-mannonate
EFAU085_RS07895	COG0246	Mannitol dehydrogenase
EFAU085_RS07945	COG0433	COG0433 Predicted ATPase
EFAU085_RS07990	COG2946	Replication initiation factor
EFAU085_RS08000	COG1674	ftsk spoiiie
EFAU085_RS08050	COG0481	GTPase activity
EFAU085_RS08070	COG0542	response to heat
EFAU085_RS08085	COG1597	lipid kinase activity
EFAU085_RS08090	COG2195	Cleaves the N-terminal amino acid of tripeptides
EFAU085_RS08095	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EFAU085_RS08100	COG2384	SAM-dependent methyltransferase
EFAU085_RS08110	COG1484	DNA-dependent DNA replication
EFAU085_RS08120	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EFAU085_RS08135	COG0237	dephospho-CoA kinase activity
EFAU085_RS08140	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
EFAU085_RS08145	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EFAU085_RS08145	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EFAU085_RS08160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EFAU085_RS08165	COG1434	Gram-negative-bacterium-type cell wall biogenesis
EFAU085_RS08170	COG3091	SprT-like family
EFAU085_RS08175	COG2183	response to ionizing radiation
EFAU085_RS08185	COG1054	Belongs to the UPF0176 family
EFAU085_RS08210	COG0546	phosphoglycolate phosphatase activity
EFAU085_RS08215	COG0588	phosphoglycerate mutase activity
EFAU085_RS08260	COG2207	Transcriptional regulator
EFAU085_RS08260	COG4753	response regulator
EFAU085_RS08270	COG2972	Histidine kinase
EFAU085_RS08275	COG0077	Prephenate dehydratase
EFAU085_RS08280	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
EFAU085_RS08285	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
EFAU085_RS08290	COG0287	Prephenate dehydrogenase
EFAU085_RS08295	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EFAU085_RS08305	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
EFAU085_RS08310	COG3250	beta-galactosidase activity
EFAU085_RS08325	COG1609	Transcriptional regulator
EFAU085_RS08335	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
EFAU085_RS08345	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EFAU085_RS08350	COG1597	lipid kinase activity
EFAU085_RS08355	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EFAU085_RS08360	COG0154	amidase activity
EFAU085_RS08365	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EFAU085_RS08370	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EFAU085_RS08375	COG0210	DNA helicase
EFAU085_RS08385	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS08385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS08385	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS08390	COG1105	Belongs to the carbohydrate kinase PfkB family
EFAU085_RS08395	COG1349	DNA-binding transcription factor activity
EFAU085_RS08415	COG0218	Necessary for normal cell division and for the maintenance of normal septation
EFAU085_RS08420	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EFAU085_RS08425	COG0544	peptidyl-prolyl cis-trans isomerase activity
EFAU085_RS08435	COG1714	RDD family
EFAU085_RS08450	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EFAU085_RS08455	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EFAU085_RS08530	COG1481	regulation of sporulation
EFAU085_RS08535	COG0391	Required for morphogenesis under gluconeogenic growth conditions
EFAU085_RS08540	COG1660	Displays ATPase and GTPase activities
EFAU085_RS08555	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EFAU085_RS08560	COG0556	nucleotide-excision repair
EFAU085_RS08565	COG0765	amino acid transport
EFAU085_RS08570	COG1126	abc transporter atp-binding protein
EFAU085_RS08575	COG3835	regulator
EFAU085_RS08580	COG0484	heat shock protein binding
EFAU085_RS08585	COG0443	Heat shock 70 kDa protein
EFAU085_RS08590	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
EFAU085_RS08595	COG1420	regulation of RNA biosynthetic process
EFAU085_RS08600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EFAU085_RS08610	COG0693	protein deglycase activity
EFAU085_RS08620	COG1619	proteins homologs of microcin C7 resistance protein MccF
EFAU085_RS08630	COG5646	InterPro IPR014922
EFAU085_RS08640	COG4975	Glucose uptake
EFAU085_RS08650	COG0196	riboflavin kinase activity
EFAU085_RS08655	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EFAU085_RS08670	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EFAU085_RS08685	COG2740	Nucleic-acid-binding protein implicated in transcription termination
EFAU085_RS08690	COG0195	Participates in both transcription termination and antitermination
EFAU085_RS08695	COG0779	Required for maturation of 30S ribosomal subunits
EFAU085_RS08700	COG2176	DNA-directed DNA polymerase activity
EFAU085_RS08705	COG0442	prolyl-tRNA aminoacylation
EFAU085_RS08710	COG0750	zinc metalloprotease
EFAU085_RS08715	COG4589	Belongs to the CDS family
EFAU085_RS08720	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EFAU085_RS08730	COG0233	cytoplasmic translational termination
EFAU085_RS08735	COG0528	UMP kinase activity
EFAU085_RS08740	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EFAU085_RS08745	COG0052	Belongs to the universal ribosomal protein uS2 family
EFAU085_RS08750	COG1438	arginine binding
EFAU085_RS08760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS08765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS08770	COG0018	arginyl-trna synthetase
EFAU085_RS08790	COG2235	arginine
EFAU085_RS08795	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EFAU085_RS08800	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EFAU085_RS08805	COG0456	acetyltransferase
EFAU085_RS08815	COG1214	PFAM Peptidase M22, glycoprotease
EFAU085_RS08820	COG1609	Transcriptional regulator
EFAU085_RS08825	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
EFAU085_RS08830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EFAU085_RS08845	COG3189	MarR family transcriptional regulator
EFAU085_RS08850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
EFAU085_RS08855	COG1940	carbohydrate kinase activity
EFAU085_RS08870	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EFAU085_RS08875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EFAU085_RS08880	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EFAU085_RS08885	COG1120	ATPase activity
EFAU085_RS08900	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EFAU085_RS08905	COG4876	unkown
EFAU085_RS08910	COG0367	asparagine synthase
EFAU085_RS08915	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
EFAU085_RS08925	COG1309	transcriptional regulator
EFAU085_RS08950	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EFAU085_RS08965	COG0584	glycerophosphoryl diester phosphodiesterase
EFAU085_RS09000	COG0166	Belongs to the GPI family
EFAU085_RS09005	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EFAU085_RS09010	COG2081	HI0933 family
EFAU085_RS09015	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EFAU085_RS09020	COG0710	3-dehydroquinate dehydratase activity
EFAU085_RS09025	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
EFAU085_RS09030	COG1368	sulfuric ester hydrolase activity
EFAU085_RS09050	COG5002	protein histidine kinase activity
EFAU085_RS09050	COG3850	Histidine kinase
EFAU085_RS09055	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS09085	COG3328	transposase activity
EFAU085_RS09100	COG1956	GAF domain-containing protein
EFAU085_RS09105	COG3527	Alpha-acetolactate decarboxylase
EFAU085_RS09110	COG0028	Belongs to the TPP enzyme family
EFAU085_RS09120	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS09130	COG0583	DNA-binding transcription factor activity
EFAU085_RS09135	COG0789	Transcriptional regulator
EFAU085_RS09140	COG2814	Major facilitator Superfamily
EFAU085_RS09195	COG4974	Belongs to the 'phage' integrase family
EFAU085_RS09220	COG4372	Transposase
EFAU085_RS09235	COG2801	Transposase and inactivated derivatives
EFAU085_RS09260	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS09260	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS09265	COG3716	PTS system mannose fructose sorbose family IID component
EFAU085_RS09275	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EFAU085_RS09275	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EFAU085_RS09280	COG1940	carbohydrate kinase activity
EFAU085_RS09285	COG2190	(PTS) system
EFAU085_RS09300	COG1609	Transcriptional regulator
EFAU085_RS09305	COG2801	Transposase and inactivated derivatives
EFAU085_RS09325	COG3385	transposase activity
EFAU085_RS09345	COG0741	lytic transglycosylase activity
EFAU085_RS09345	COG0791	NLP P60 protein
EFAU085_RS09400	COG2946	Replication initiation factor
EFAU085_RS09415	COG1674	ftsk spoiiie
EFAU085_RS09445	COG0335	large ribosomal subunit rRNA binding
EFAU085_RS09450	COG0336	Belongs to the RNA methyltransferase TrmD family
EFAU085_RS09455	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EFAU085_RS09465	COG1837	Belongs to the UPF0109 family
EFAU085_RS09470	COG0228	four-way junction DNA binding
EFAU085_RS09475	COG0431	NADPH-dependent FMN reductase
EFAU085_RS09480	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
EFAU085_RS09485	COG0519	Catalyzes the synthesis of GMP from XMP
EFAU085_RS09490	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EFAU085_RS09495	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
EFAU085_RS09505	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS09510	COG5002	protein histidine kinase activity
EFAU085_RS09515	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EFAU085_RS09520	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EFAU085_RS09540	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
EFAU085_RS09575	COG2801	Transposase and inactivated derivatives
EFAU085_RS09590	COG0714	Associated with various cellular activities
EFAU085_RS09600	COG1305	Transglutaminase-like
EFAU085_RS09605	COG2217	Heavy metal translocating P-type atpase
EFAU085_RS09610	COG2217	Heavy metal translocating P-type atpase
EFAU085_RS09615	COG2608	mercury ion transmembrane transporter activity
EFAU085_RS09620	COG3682	Transcriptional regulator
EFAU085_RS09630	COG0531	amino acid
EFAU085_RS09635	COG2217	Heavy metal translocating P-type atpase
EFAU085_RS09660	COG0017	Asparaginyl-tRNA synthetase
EFAU085_RS09675	COG1199	ATP-dependent helicase activity
EFAU085_RS09675	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EFAU085_RS09680	COG1278	Cold shock
EFAU085_RS09700	COG1686	Belongs to the peptidase S11 family
EFAU085_RS09710	COG0038	chloride channel
EFAU085_RS09725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EFAU085_RS09730	COG1254	Belongs to the acylphosphatase family
EFAU085_RS09735	COG0706	membrane insertase activity
EFAU085_RS09785	COG2207	Transcriptional regulator
EFAU085_RS09790	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EFAU085_RS09795	COG1482	cell wall glycoprotein biosynthetic process
EFAU085_RS09800	COG0662	Cupin 2, conserved barrel domain protein
EFAU085_RS09800	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
EFAU085_RS09805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EFAU085_RS09815	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
EFAU085_RS09825	COG4372	Transposase
EFAU085_RS09885	COG0438	transferase activity, transferring glycosyl groups
EFAU085_RS09940	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
EFAU085_RS09945	COG4464	protein tyrosine phosphatase activity
EFAU085_RS09950	COG0489	protein tyrosine kinase activity
EFAU085_RS09955	COG3944	biosynthesis protein
EFAU085_RS09960	COG1316	TRANSCRIPTIONal
EFAU085_RS09970	COG0751	glycine-tRNA ligase activity
EFAU085_RS09975	COG0752	glycyl-tRNA synthetase alpha subunit
EFAU085_RS09980	COG1381	Involved in DNA repair and RecF pathway recombination
EFAU085_RS09985	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EFAU085_RS09990	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
EFAU085_RS09995	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
EFAU085_RS10005	COG1702	phosphate starvation-inducible protein PhoH
EFAU085_RS10010	COG1114	Component of the transport system for branched-chain amino acids
EFAU085_RS10015	COG1610	YqeY-like protein
EFAU085_RS10020	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EFAU085_RS10025	COG0735	belongs to the Fur family
EFAU085_RS10030	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
EFAU085_RS10035	COG0640	Transcriptional regulator
EFAU085_RS10040	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EFAU085_RS10045	COG0492	ferredoxin-NADP+ reductase activity
EFAU085_RS10050	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS10055	COG1486	melibiose metabolic process
EFAU085_RS10060	COG1737	Transcriptional regulator
EFAU085_RS10065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS10065	COG2190	(PTS) system
EFAU085_RS10065	COG1263	PTS System
EFAU085_RS10070	COG3711	transcriptional antiterminator
EFAU085_RS10075	COG1132	(ABC) transporter
EFAU085_RS10080	COG1132	(ABC) transporter
EFAU085_RS10085	COG3763	UPF0154 protein
EFAU085_RS10090	COG1914	H( )-stimulated, divalent metal cation uptake system
EFAU085_RS10100	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
EFAU085_RS10145	COG1609	Transcriptional regulator
EFAU085_RS10150	COG0006	proline dipeptidase activity
EFAU085_RS10155	COG4980	gas vesicle protein
EFAU085_RS10165	COG1210	Utp--glucose-1-phosphate uridylyltransferase
EFAU085_RS10170	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
EFAU085_RS10175	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EFAU085_RS10180	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
EFAU085_RS10190	COG1950	PFAM Membrane protein of
EFAU085_RS10215	COG0704	Plays a role in the regulation of phosphate uptake
EFAU085_RS10220	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EFAU085_RS10225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EFAU085_RS10230	COG0581	inorganic phosphate transmembrane transporter activity
EFAU085_RS10235	COG0573	inorganic phosphate transmembrane transporter activity
EFAU085_RS10240	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EFAU085_RS10245	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EFAU085_RS10250	COG2177	Part of the ABC transporter FtsEX involved in
EFAU085_RS10255	COG2884	Cell division ATP-binding protein ftsE
EFAU085_RS10260	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
EFAU085_RS10265	COG0653	protein targeting
EFAU085_RS10280	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
EFAU085_RS10285	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS10295	COG1739	Uncharacterized protein family UPF0029
EFAU085_RS10300	COG2188	Transcriptional regulator
EFAU085_RS10330	COG1940	carbohydrate kinase activity
EFAU085_RS10350	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EFAU085_RS10360	COG0355	proton-transporting ATP synthase activity, rotational mechanism
EFAU085_RS10365	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EFAU085_RS10370	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
EFAU085_RS10375	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
EFAU085_RS10380	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EFAU085_RS10385	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EFAU085_RS10390	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EFAU085_RS10395	COG0356	it plays a direct role in the translocation of protons across the membrane
EFAU085_RS10400	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EFAU085_RS10405	COG0557	exoribonuclease II activity
EFAU085_RS10415	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EFAU085_RS10420	COG2388	GCN5-related N-acetyl-transferase
EFAU085_RS10440	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EFAU085_RS10455	COG0149	triose-phosphate isomerase activity
EFAU085_RS10460	COG0126	phosphoglycerate kinase activity
EFAU085_RS10470	COG2390	Transcriptional regulator
EFAU085_RS10475	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
EFAU085_RS10495	COG1595	DNA-templated transcription, initiation
EFAU085_RS10510	COG0095	Lipoate-protein ligase
EFAU085_RS10515	COG1078	dGTPase activity
EFAU085_RS10520	COG0561	phosphatase activity
EFAU085_RS10525	COG0494	nUDIX hydrolase
EFAU085_RS10530	COG0346	lactoylglutathione lyase activity
EFAU085_RS10540	COG2423	ornithine cyclodeaminase activity
EFAU085_RS10545	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EFAU085_RS10550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EFAU085_RS10555	COG1394	ATPase activity, coupled to movement of substances
EFAU085_RS10560	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
EFAU085_RS10565	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
EFAU085_RS10570	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
EFAU085_RS10575	COG1527	subunit (C
EFAU085_RS10580	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
EFAU085_RS10585	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EFAU085_RS10590	COG1269	ATP hydrolysis coupled proton transport
EFAU085_RS10600	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
EFAU085_RS10605	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
EFAU085_RS10615	COG4152	abc transporter atp-binding protein
EFAU085_RS10620	COG0322	excinuclease ABC activity
EFAU085_RS10625	COG3118	belongs to the thioredoxin family
EFAU085_RS10645	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EFAU085_RS10660	COG1136	(ABC) transporter
EFAU085_RS10670	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS10705	COG1304	FMN binding
EFAU085_RS10720	COG0281	malic enzyme
EFAU085_RS10740	COG3906	Belongs to the UPF0473 family
EFAU085_RS10745	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EFAU085_RS10750	COG4472	Bacterial protein of unknown function (DUF965)
EFAU085_RS10780	COG4555	ABC transporter
EFAU085_RS10790	COG3689	TIGRFAM TIGR03943 family protein
EFAU085_RS10795	COG0701	Predicted permease
EFAU085_RS10800	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EFAU085_RS10805	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
EFAU085_RS10810	COG0488	(ABC) transporter
EFAU085_RS10815	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
EFAU085_RS10830	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS10850	COG2207	Transcriptional regulator
EFAU085_RS10850	COG0662	Cupin 2, conserved barrel domain protein
EFAU085_RS10855	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS10865	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EFAU085_RS10870	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EFAU085_RS10875	COG0584	glycerophosphoryl diester phosphodiesterase
EFAU085_RS10885	COG0740	serine-type endopeptidase activity
EFAU085_RS10890	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
EFAU085_RS10900	COG1132	(ABC) transporter
EFAU085_RS10910	COG5503	Protein of unknown function (DUF1447)
EFAU085_RS10920	COG1278	Cold shock
EFAU085_RS10925	COG2003	Belongs to the UPF0758 family
EFAU085_RS11080	COG1783	phage Terminase large subunit
EFAU085_RS11155	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS11165	COG3723	Recombinational DNA repair protein, rece pathway
EFAU085_RS11170	COG5377	YqaJ viral recombinase family
EFAU085_RS11210	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EFAU085_RS11215	COG2003	Belongs to the UPF0758 family
EFAU085_RS11220	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS11225	COG0285	dihydrofolate synthase activity
EFAU085_RS11230	COG0525	valine-tRNA ligase activity
EFAU085_RS11235	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
EFAU085_RS11240	COG0301	tRNA thio-modification
EFAU085_RS11245	COG1104	cysteine desulfurase activity
EFAU085_RS11250	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
EFAU085_RS11260	COG0561	phosphatase activity
EFAU085_RS11265	COG1801	Protein of unknown function DUF72
EFAU085_RS11285	COG3579	cysteine-type endopeptidase activity
EFAU085_RS11355	COG1098	S1 RNA binding domain
EFAU085_RS11360	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
EFAU085_RS11370	COG0492	ferredoxin-NADP+ reductase activity
EFAU085_RS11375	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
EFAU085_RS11390	COG4470	Protein conserved in bacteria
EFAU085_RS11395	COG0737	Belongs to the 5'-nucleotidase family
EFAU085_RS11405	COG0590	tRNA wobble adenosine to inosine editing
EFAU085_RS11410	COG2508	Transcriptional regulator
EFAU085_RS11420	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EFAU085_RS11420	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
EFAU085_RS11440	COG2738	Putative neutral zinc metallopeptidase
EFAU085_RS11445	COG2824	Alkylphosphonate utilization operon protein PhnA
EFAU085_RS11450	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
EFAU085_RS11455	COG4109	DRTGG domain
EFAU085_RS11460	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
EFAU085_RS11475	COG0577	efflux transmembrane transporter activity
EFAU085_RS11480	COG1136	(ABC) transporter
EFAU085_RS11490	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EFAU085_RS11500	COG4821	SIS domain
EFAU085_RS11530	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
EFAU085_RS11535	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
EFAU085_RS11540	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EFAU085_RS11545	COG3716	PTS system mannose fructose sorbose family IID component
EFAU085_RS11550	COG3715	PTS system
EFAU085_RS11575	COG1132	(ABC) transporter
EFAU085_RS11580	COG1132	(ABC) transporter
EFAU085_RS11590	COG1803	Methylglyoxal synthase
EFAU085_RS11595	COG3842	ATPase activity
EFAU085_RS11605	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EFAU085_RS11615	COG0084	hydrolase, TatD family'
EFAU085_RS11620	COG0531	amino acid
EFAU085_RS11635	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EFAU085_RS11635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EFAU085_RS11650	COG0675	Transposase, IS605 OrfB family
EFAU085_RS11655	COG4608	Belongs to the ABC transporter superfamily
EFAU085_RS11660	COG0444	Belongs to the ABC transporter superfamily
EFAU085_RS11665	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EFAU085_RS11670	COG0601	transmembrane transport
EFAU085_RS11680	COG4166	transmembrane transport
EFAU085_RS11700	COG0820	rRNA (adenine-C2-)-methyltransferase activity
EFAU085_RS11705	COG1280	lysine exporter protein (LysE YggA)
EFAU085_RS11705	COG1674	ftsk spoiiie
EFAU085_RS11710	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS11715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EFAU085_RS11720	COG1126	abc transporter atp-binding protein
EFAU085_RS11725	COG0765	amino acid transport
EFAU085_RS11765	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EFAU085_RS11775	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EFAU085_RS11780	COG0009	L-threonylcarbamoyladenylate synthase
EFAU085_RS11790	COG2890	protein-(glutamine-N5) methyltransferase activity
EFAU085_RS11795	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EFAU085_RS11800	COG1435	thymidine kinase activity
EFAU085_RS11815	COG2226	methyltransferase
EFAU085_RS11820	COG0681	Belongs to the peptidase S26 family
EFAU085_RS11840	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EFAU085_RS11845	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EFAU085_RS11850	COG3442	glutamine amidotransferase
EFAU085_RS11860	COG0246	Mannitol dehydrogenase
EFAU085_RS11865	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS11870	COG2213	PTS system mannitol-specific
EFAU085_RS11875	COG1131	(ABC) transporter
EFAU085_RS11885	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS11890	COG3711	transcriptional antiterminator
EFAU085_RS11895	COG2213	PTS system mannitol-specific
EFAU085_RS11900	COG1482	cell wall glycoprotein biosynthetic process
EFAU085_RS11915	COG1132	(ABC) transporter
EFAU085_RS11935	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
EFAU085_RS11940	COG0628	permease
EFAU085_RS11950	COG2706	6-phosphogluconolactonase activity
EFAU085_RS11965	COG1368	sulfuric ester hydrolase activity
EFAU085_RS11970	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EFAU085_RS11975	COG2160	L-arabinose isomerase activity
EFAU085_RS11980	COG0235	Class ii aldolase
EFAU085_RS12000	COG3940	Belongs to the glycosyl hydrolase 43 family
EFAU085_RS12005	COG3534	alpha-L-arabinofuranosidase
EFAU085_RS12015	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS12020	COG1175	transmembrane transport
EFAU085_RS12040	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EFAU085_RS12045	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EFAU085_RS12060	COG0789	Transcriptional regulator
EFAU085_RS12065	COG1609	Transcriptional regulator
EFAU085_RS12075	COG0459	protein refolding
EFAU085_RS12080	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EFAU085_RS12090	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS12095	COG2910	NAD(P)H-binding
EFAU085_RS12100	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
EFAU085_RS12115	COG5002	protein histidine kinase activity
EFAU085_RS12120	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS12125	COG1307	EDD domain protein, DegV family
EFAU085_RS12165	COG2963	transposase activity
EFAU085_RS12170	COG2801	Transposase and inactivated derivatives
EFAU085_RS12395	COG1061	Type III restriction enzyme res subunit
EFAU085_RS12425	COG1396	sequence-specific DNA binding
EFAU085_RS12450	COG1714	RDD family
EFAU085_RS12480	COG3279	Response regulator of the LytR AlgR family
EFAU085_RS12515	COG3448	diguanylate cyclase activity
EFAU085_RS12515	COG4175	Glycine betaine
EFAU085_RS12540	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
EFAU085_RS12545	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EFAU085_RS12555	COG0628	permease
EFAU085_RS12560	COG1285	pathogenesis
EFAU085_RS12565	COG0363	glucosamine-6-phosphate deaminase activity
EFAU085_RS12570	COG0488	(ABC) transporter
EFAU085_RS12575	COG2814	Major facilitator Superfamily
EFAU085_RS12585	COG0222	ribosome binding
EFAU085_RS12590	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EFAU085_RS12595	COG0081	regulation of translation
EFAU085_RS12600	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EFAU085_RS12605	COG1760	l-serine dehydratase
EFAU085_RS12610	COG1760	l-serine dehydratase
EFAU085_RS12615	COG1304	FMN binding
EFAU085_RS12620	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
EFAU085_RS12625	COG0250	Participates in transcription elongation, termination and antitermination
EFAU085_RS12630	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EFAU085_RS12635	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EFAU085_RS12665	COG1131	(ABC) transporter
EFAU085_RS12670	COG4585	Histidine kinase
EFAU085_RS12675	COG2197	response regulator
EFAU085_RS12685	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EFAU085_RS12695	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
EFAU085_RS12700	COG2226	methyltransferase
EFAU085_RS12705	COG3142	Participates in the control of copper homeostasis
EFAU085_RS12710	COG2239	Acts as a magnesium transporter
EFAU085_RS12715	COG0564	pseudouridine synthase activity
EFAU085_RS12720	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EFAU085_RS12725	COG2357	RelA SpoT domain protein
EFAU085_RS12730	COG4116	CYTH
EFAU085_RS12750	COG4862	establishment of competence for transformation
EFAU085_RS12760	COG1393	Belongs to the ArsC family
EFAU085_RS12775	COG0419	ATPase involved in DNA repair
EFAU085_RS12780	COG0420	3'-5' exonuclease activity
EFAU085_RS12785	COG0204	Acyl-transferase
EFAU085_RS12790	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EFAU085_RS12795	COG2827	Endonuclease containing a URI domain
EFAU085_RS12800	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
EFAU085_RS12800	COG2755	lipolytic protein G-D-S-L family
EFAU085_RS12805	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EFAU085_RS12810	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EFAU085_RS12815	COG0124	histidyl-tRNA synthetase
EFAU085_RS12820	COG0667	Aldo Keto reductase
EFAU085_RS12825	COG2124	cytochrome p450
EFAU085_RS12830	COG1490	D-aminoacyl-tRNA deacylase activity
EFAU085_RS12835	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EFAU085_RS12840	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EFAU085_RS12845	COG2264	protein methyltransferase activity
EFAU085_RS12855	COG2094	Belongs to the DNA glycosylase MPG family
EFAU085_RS12860	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EFAU085_RS12870	COG0589	response to stress
EFAU085_RS12875	COG0488	(ABC) transporter
EFAU085_RS12880	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EFAU085_RS12885	COG0827	DNA restriction-modification system
EFAU085_RS12910	COG4537	Required for transformation and DNA binding
EFAU085_RS12915	COG1459	type II secretion system
EFAU085_RS12920	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EFAU085_RS12925	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
EFAU085_RS12930	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EFAU085_RS12940	COG4473	ABC transporter
EFAU085_RS12945	COG1131	(ABC) transporter
EFAU085_RS12950	COG0537	adenosine 5'-monophosphoramidase activity
EFAU085_RS12960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EFAU085_RS12965	COG3481	metal-dependent phosphohydrolase, HD sub domain
EFAU085_RS12970	COG4717	serine-type aminopeptidase activity
EFAU085_RS12975	COG0420	3'-5' exonuclease activity
EFAU085_RS12980	COG0561	phosphatase activity
EFAU085_RS13015	COG2211	Major facilitator Superfamily
EFAU085_RS13020	COG3507	Belongs to the glycosyl hydrolase 43 family
EFAU085_RS13035	COG1073	alpha beta
EFAU085_RS13045	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
EFAU085_RS13050	COG1653	transport
EFAU085_RS13060	COG4209	transmembrane transport
EFAU085_RS13065	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS13070	COG2207	Transcriptional regulator
EFAU085_RS13075	COG1609	Transcriptional regulator
EFAU085_RS13080	COG0246	Mannitol dehydrogenase
EFAU085_RS13085	COG2721	sulfolactate sulfo-lyase activity
EFAU085_RS13090	COG1904	glucuronate isomerase
EFAU085_RS13100	COG2755	lipolytic protein G-D-S-L family
EFAU085_RS13110	COG1132	(ABC) transporter
EFAU085_RS13115	COG3679	Belongs to the UPF0342 family
EFAU085_RS13120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
EFAU085_RS13125	COG0564	pseudouridine synthase activity
EFAU085_RS13130	COG1940	carbohydrate kinase activity
EFAU085_RS13135	COG0383	alpha-mannosidase activity
EFAU085_RS13155	COG4753	response regulator
EFAU085_RS13155	COG2207	Transcriptional regulator
EFAU085_RS13160	COG2972	Histidine kinase
EFAU085_RS13170	COG1653	transport
EFAU085_RS13175	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS13180	COG1175	transmembrane transport
EFAU085_RS13185	COG1187	pseudouridine synthase activity
EFAU085_RS13190	COG2244	polysaccharide biosynthetic process
EFAU085_RS13205	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS13260	COG0789	Transcriptional regulator
EFAU085_RS13260	COG4978	Transcriptional regulator
EFAU085_RS13270	COG1132	(ABC) transporter
EFAU085_RS13280	COG0495	leucyl-tRNA aminoacylation
EFAU085_RS13285	COG1388	LysM domain
EFAU085_RS13285	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS13290	COG0671	phosphoesterase, PA-phosphatase related
EFAU085_RS13295	COG1242	4 iron, 4 sulfur cluster binding
EFAU085_RS13300	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
EFAU085_RS13305	COG1132	(ABC) transporter
EFAU085_RS13310	COG1132	(ABC) transporter
EFAU085_RS13325	COG0477	Major facilitator Superfamily
EFAU085_RS13330	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EFAU085_RS13440	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
EFAU085_RS13445	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EFAU085_RS13450	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EFAU085_RS13460	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
EFAU085_RS13465	COG0037	tRNA processing
EFAU085_RS13470	COG1098	S1 RNA binding domain
EFAU085_RS13480	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
EFAU085_RS13485	COG2244	polysaccharide biosynthetic process
EFAU085_RS13490	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EFAU085_RS13495	COG0193	aminoacyl-tRNA hydrolase activity
EFAU085_RS13500	COG0039	L-malate dehydrogenase activity
EFAU085_RS13510	COG0217	transcriptional regulatory protein
EFAU085_RS13535	COG1792	Involved in formation and maintenance of cell shape
EFAU085_RS13545	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EFAU085_RS13550	COG1162	GTPase activity
EFAU085_RS13555	COG2815	serine threonine protein kinase
EFAU085_RS13555	COG0515	serine threonine protein kinase
EFAU085_RS13560	COG0631	protein serine/threonine phosphatase activity
EFAU085_RS13565	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EFAU085_RS13565	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EFAU085_RS13570	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EFAU085_RS13575	COG0242	peptide deformylase activity
EFAU085_RS13580	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EFAU085_RS13585	COG1758	RNA polymerase activity
EFAU085_RS13590	COG0194	GDP metabolic process
EFAU085_RS13600	COG1561	YicC-like family, N-terminal region
EFAU085_RS13610	COG1752	Esterase of the alpha-beta hydrolase superfamily
EFAU085_RS13625	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EFAU085_RS13630	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EFAU085_RS13635	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EFAU085_RS13640	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EFAU085_RS13645	COG1121	(ABC) transporter
EFAU085_RS13650	COG0803	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS13650	COG3443	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS13655	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EFAU085_RS13660	COG0392	lysyltransferase activity
EFAU085_RS13660	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EFAU085_RS13665	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EFAU085_RS13670	COG1418	mRNA catabolic process
EFAU085_RS13675	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
EFAU085_RS13680	COG1058	Belongs to the CinA family
EFAU085_RS13680	COG1546	Belongs to the CinA family
EFAU085_RS13685	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EFAU085_RS13690	COG1426	Protein conserved in bacteria
EFAU085_RS13695	COG0612	Peptidase, M16
EFAU085_RS13700	COG0612	Peptidase, M16
EFAU085_RS13705	COG1970	mechanosensitive ion channel activity
EFAU085_RS13710	COG2153	protein acetylation
EFAU085_RS13720	COG4466	Protein conserved in bacteria
EFAU085_RS13735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EFAU085_RS13740	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
EFAU085_RS13745	COG0215	cysteine-tRNA ligase activity
EFAU085_RS13750	COG1045	serine acetyltransferase
EFAU085_RS13755	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EFAU085_RS13760	COG4956	integral membrane protein (PIN domain superfamily)
EFAU085_RS13770	COG0756	dUTP diphosphatase activity
EFAU085_RS13775	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
EFAU085_RS13780	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
EFAU085_RS13795	COG2814	Major facilitator Superfamily
EFAU085_RS13815	COG0778	Nitroreductase
EFAU085_RS13825	COG1388	LysM domain
EFAU085_RS13825	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS13830	COG4221	oxidoreductase activity
EFAU085_RS13845	COG3711	transcriptional antiterminator
EFAU085_RS13850	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EFAU085_RS13850	COG2190	(PTS) system
EFAU085_RS13850	COG1263	PTS System
EFAU085_RS13855	COG0702	epimerase
EFAU085_RS13870	COG2207	Transcriptional regulator
EFAU085_RS13870	COG3708	Transcriptional regulator
EFAU085_RS13880	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EFAU085_RS13890	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS13895	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
EFAU085_RS13905	COG0604	alcohol dehydrogenase
EFAU085_RS13910	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EFAU085_RS13915	COG0842	Transport permease protein
EFAU085_RS13920	COG1131	(ABC) transporter
EFAU085_RS13930	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EFAU085_RS13935	COG0383	alpha-mannosidase activity
EFAU085_RS13940	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS13945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS13950	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS13950	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS13950	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EFAU085_RS13955	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EFAU085_RS13955	COG3711	transcriptional antiterminator
EFAU085_RS13960	COG2205	protein histidine kinase activity
EFAU085_RS13965	COG0745	RESPONSE REGULATOR receiver
EFAU085_RS14005	COG1674	ftsk spoiiie
EFAU085_RS14010	COG3344	reverse transcriptase
EFAU085_RS14025	COG1674	ftsk spoiiie
EFAU085_RS14035	COG2946	Replication initiation factor
EFAU085_RS14095	COG0741	lytic transglycosylase activity
EFAU085_RS14095	COG0791	NLP P60 protein
EFAU085_RS14120	COG3942	CHAP domain
EFAU085_RS14120	COG1705	Flagellar rod assembly protein muramidase FlgJ
EFAU085_RS14125	COG0446	pyridine nucleotide-disulphide oxidoreductase
EFAU085_RS14140	COG2207	Transcriptional regulator
EFAU085_RS14140	COG3708	Transcriptional regulator
EFAU085_RS14190	COG0803	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS14190	COG3443	Belongs to the bacterial solute-binding protein 9 family
EFAU085_RS14200	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EFAU085_RS14210	COG0333	Belongs to the bacterial ribosomal protein bL32 family
EFAU085_RS14215	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EFAU085_RS14220	COG1132	(ABC) transporter
EFAU085_RS14270	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EFAU085_RS14275	COG1082	Xylose isomerase domain protein TIM barrel
EFAU085_RS14280	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS14295	COG1012	belongs to the aldehyde dehydrogenase family
EFAU085_RS14305	COG3718	enzyme involved in inositol metabolism
EFAU085_RS14310	COG3962	Belongs to the TPP enzyme family
EFAU085_RS14315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EFAU085_RS14320	COG1609	Transcriptional regulator
EFAU085_RS14345	COG1378	Sugar-specific transcriptional regulator TrmB
EFAU085_RS14360	COG4974	Belongs to the 'phage' integrase family
EFAU085_RS14365	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EFAU085_RS14370	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EFAU085_RS14375	COG0783	Belongs to the Dps family
EFAU085_RS14380	COG1070	Carbohydrate kinase
EFAU085_RS14385	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EFAU085_RS14390	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EFAU085_RS14395	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EFAU085_RS14405	COG1554	hydrolase, family 65, central catalytic
EFAU085_RS14410	COG0673	inositol 2-dehydrogenase activity
EFAU085_RS14415	COG1082	Xylose isomerase domain protein TIM barrel
EFAU085_RS14420	COG1063	alcohol dehydrogenase
EFAU085_RS14425	COG0395	ABC-type sugar transport system, permease component
EFAU085_RS14430	COG1175	transmembrane transport
EFAU085_RS14435	COG1653	transport
EFAU085_RS14440	COG0366	Alpha amylase catalytic
EFAU085_RS14445	COG1609	Transcriptional regulator
EFAU085_RS14450	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EFAU085_RS14455	COG0085	RNA polymerase activity
EFAU085_RS14465	COG4120	Belongs to the binding-protein-dependent transport system permease family
EFAU085_RS14475	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
EFAU085_RS14475	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
EFAU085_RS14490	COG0142	geranyltranstransferase activity
EFAU085_RS14510	COG4939	FMN-binding domain protein
EFAU085_RS14525	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EFAU085_RS14530	COG0826	peptidase U32
EFAU085_RS14535	COG0826	peptidase U32
EFAU085_RS14540	COG0542	response to heat
EFAU085_RS14545	COG4463	regulation of RNA biosynthetic process
EFAU085_RS14625	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EFAU085_RS14630	COG0516	GMP reductase activity
EFAU085_RS14630	COG0517	IMP dehydrogenase activity
EFAU085_RS14640	COG0012	GTP binding
EFAU085_RS14645	COG4481	Protein conserved in bacteria
EFAU085_RS14655	COG1192	Involved in chromosome partitioning
EFAU085_RS14660	COG0357	Ribosomal RNA small subunit methyltransferase G
EFAU085_RS14665	COG0445	tRNA wobble uridine modification
EFAU085_RS14670	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EFAU085_RS14680	COG1847	R3H domain protein
EFAU085_RS14685	COG0706	membrane insertase activity
EFAU085_RS14690	COG0594	ribonuclease P activity
EFAU085_RS14695	COG0230	Belongs to the bacterial ribosomal protein bL34 family
EFAU085_RS14705	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS14915	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EFAU085_RS14915	COG0519	Catalyzes the synthesis of GMP from XMP
EFAU085_RS14980	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
EFAU085_RS15120	COG0202	RNA polymerase activity
EFAU085_RS15185	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EFAU085_RS15250	COG1196	nuclear chromosome segregation
EFAU085_RS15420	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EFAU085_RS15445	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS15455	COG2501	S4 domain
EFAU085_RS15460	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EFAU085_RS15620	COG2723	6-phospho-beta-galactosidase activity
EFAU085_RS15645	COG1609	Transcriptional regulator
EFAU085_RS15680	COG1744	ABC transporter substrate-binding protein PnrA-like
EFAU085_RS15690	COG3845	ABC transporter
EFAU085_RS15695	COG3845	ABC transporter
EFAU085_RS15770	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EFAU085_RS15775	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EFAU085_RS15820	COG0592	DNA-directed DNA polymerase activity
EFAU085_RS15840	COG0187	DNA topoisomerase II activity
EFAU085_RS15845	COG0187	DNA topoisomerase II activity
EFAU085_RS15920	COG0488	(ABC) transporter
EFAU085_RS16010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS16015	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS16040	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EFAU085_RS16085	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EFAU085_RS16110	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP