locus-tag class description JCP98_RS00005 PF00308 Bacterial dnaA protein JCP98_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JCP98_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JCP98_RS00010 PF02767 DNA polymerase III beta subunit, central domain JCP98_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JCP98_RS00020 PF02463 RecF/RecN/SMC N terminal domain JCP98_RS00025 PF00204 DNA gyrase B JCP98_RS00025 PF01751 Toprim domain JCP98_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JCP98_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JCP98_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JCP98_RS00035 PF01250 Ribosomal protein S6 JCP98_RS00040 PF00436 Single-strand binding protein family JCP98_RS00045 PF01084 Ribosomal protein S18 JCP98_RS00050 PF01368 DHH family JCP98_RS00050 PF02272 DHHA1 domain JCP98_RS00055 PF01281 Ribosomal protein L9, N-terminal domain JCP98_RS00055 PF03948 Ribosomal protein L9, C-terminal domain JCP98_RS00060 PF03796 DnaB-like helicase C terminal domain JCP98_RS00060 PF00772 DnaB-like helicase N terminal domain JCP98_RS00065 PF00709 Adenylosuccinate synthetase JCP98_RS00070 PF02645 Uncharacterised protein, DegV family COG1307 JCP98_RS00075 PF12848 ABC transporter JCP98_RS00075 PF00005 ABC transporter JCP98_RS00085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP98_RS00085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCP98_RS00085 PF00205 Thiamine pyrophosphate enzyme, central domain JCP98_RS00090 PF02535 ZIP Zinc transporter JCP98_RS00100 PF06736 Protein of unknown function (DUF1211) JCP98_RS00110 PF04892 VanZ like family JCP98_RS00130 PF00872 Transposase, Mutator family JCP98_RS00155 PF08220 DeoR-like helix-turn-helix domain JCP98_RS00155 PF00455 DeoR C terminal sensor domain JCP98_RS00160 PF00232 Glycosyl hydrolase family 1 JCP98_RS00165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP98_RS00170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS00170 PF02378 Phosphotransferase system, EIIC JCP98_RS00175 PF07745 Glycosyl hydrolase family 53 JCP98_RS00180 PF00872 Transposase, Mutator family JCP98_RS00185 PF02463 RecF/RecN/SMC N terminal domain JCP98_RS00190 PF00580 UvrD/REP helicase N-terminal domain JCP98_RS00190 PF13361 UvrD-like helicase C-terminal domain JCP98_RS00215 PF02486 Replication initiation factor JCP98_RS00215 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP98_RS00260 PF00877 NlpC/P60 family JCP98_RS00275 PF14492 Elongation Factor G, domain II JCP98_RS00275 PF03764 Elongation factor G, domain IV JCP98_RS00275 PF00009 Elongation factor Tu GTP binding domain JCP98_RS00275 PF00679 Elongation factor G C-terminus JCP98_RS00305 PF14659 Phage integrase, N-terminal SAM-like domain JCP98_RS00305 PF00589 Phage integrase family JCP98_RS00310 PF00117 Glutamine amidotransferase class-I JCP98_RS00310 PF00958 GMP synthase C terminal domain JCP98_RS00310 PF02540 NAD synthase JCP98_RS00315 PF00485 Phosphoribulokinase / Uridine kinase family JCP98_RS00320 PF05175 Methyltransferase small domain JCP98_RS00325 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS00330 PF00591 Glycosyl transferase family, a/b domain JCP98_RS00330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JCP98_RS00330 PF02885 Glycosyl transferase family, helical bundle domain JCP98_RS00335 PF01791 DeoC/LacD family aldolase JCP98_RS00340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCP98_RS00345 PF02608 ABC transporter substrate-binding protein PnrA-like JCP98_RS00350 PF00005 ABC transporter JCP98_RS00355 PF02653 Branched-chain amino acid transport system / permease component JCP98_RS00360 PF02653 Branched-chain amino acid transport system / permease component JCP98_RS00365 PF01676 Metalloenzyme superfamily JCP98_RS00370 PF01048 Phosphorylase superfamily JCP98_RS00375 PF01048 Phosphorylase superfamily JCP98_RS00380 PF00300 Histidine phosphatase superfamily (branch 1) JCP98_RS00385 PF02796 Helix-turn-helix domain of resolvase JCP98_RS00385 PF00239 Resolvase, N terminal domain JCP98_RS00390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCP98_RS00395 PF00164 Ribosomal protein S12/S23 JCP98_RS00400 PF00177 Ribosomal protein S7p/S5e JCP98_RS00405 PF00009 Elongation factor Tu GTP binding domain JCP98_RS00405 PF03764 Elongation factor G, domain IV JCP98_RS00405 PF14492 Elongation Factor G, domain II JCP98_RS00405 PF00679 Elongation factor G C-terminus JCP98_RS00405 PF03144 Elongation factor Tu domain 2 JCP98_RS00410 PF03144 Elongation factor Tu domain 2 JCP98_RS00410 PF00009 Elongation factor Tu GTP binding domain JCP98_RS00410 PF03143 Elongation factor Tu C-terminal domain JCP98_RS00415 PF00338 Ribosomal protein S10p/S20e JCP98_RS00420 PF00297 Ribosomal protein L3 JCP98_RS00425 PF00573 Ribosomal protein L4/L1 family JCP98_RS00430 PF00276 Ribosomal protein L23 JCP98_RS00435 PF03947 Ribosomal Proteins L2, C-terminal domain JCP98_RS00435 PF00181 Ribosomal Proteins L2, RNA binding domain JCP98_RS00440 PF00203 Ribosomal protein S19 JCP98_RS00445 PF00237 Ribosomal protein L22p/L17e JCP98_RS00450 PF00189 Ribosomal protein S3, C-terminal domain JCP98_RS00450 PF07650 KH domain JCP98_RS00455 PF00252 Ribosomal protein L16p/L10e JCP98_RS00460 PF00831 Ribosomal L29 protein JCP98_RS00465 PF00366 Ribosomal protein S17 JCP98_RS00470 PF00238 Ribosomal protein L14p/L23e JCP98_RS00475 PF00467 KOW motif JCP98_RS00475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCP98_RS00480 PF00673 ribosomal L5P family C-terminus JCP98_RS00480 PF00281 Ribosomal protein L5 JCP98_RS00485 PF00253 Ribosomal protein S14p/S29e JCP98_RS00490 PF00410 Ribosomal protein S8 JCP98_RS00495 PF00347 Ribosomal protein L6 JCP98_RS00500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCP98_RS00505 PF03719 Ribosomal protein S5, C-terminal domain JCP98_RS00505 PF00333 Ribosomal protein S5, N-terminal domain JCP98_RS00510 PF00327 Ribosomal protein L30p/L7e JCP98_RS00515 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCP98_RS00520 PF00344 SecY translocase JCP98_RS00525 PF05191 Adenylate kinase, active site lid JCP98_RS00530 PF01176 Translation initiation factor 1A / IF-1 JCP98_RS00535 PF00444 Ribosomal protein L36 JCP98_RS00540 PF00416 Ribosomal protein S13/S18 JCP98_RS00545 PF00411 Ribosomal protein S11 JCP98_RS00550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCP98_RS00550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCP98_RS00550 PF01000 RNA polymerase Rpb3/RpoA insert domain JCP98_RS00555 PF01196 Ribosomal protein L17 JCP98_RS00560 PF00005 ABC transporter JCP98_RS00565 PF00005 ABC transporter JCP98_RS00570 PF02361 Cobalt transport protein JCP98_RS00575 PF01416 tRNA pseudouridine synthase JCP98_RS00585 PF00830 Ribosomal L28 family JCP98_RS00590 PF03780 Asp23 family, cell envelope-related function JCP98_RS00595 PF02734 DAK2 domain JCP98_RS00595 PF13684 Dihydroxyacetone kinase family JCP98_RS00600 PF17191 RecG wedge domain JCP98_RS00600 PF00270 DEAD/DEAH box helicase JCP98_RS00600 PF00271 Helicase conserved C-terminal domain JCP98_RS00605 PF02504 Fatty acid synthesis protein JCP98_RS00610 PF00550 Phosphopantetheine attachment site JCP98_RS00615 PF00005 ABC transporter JCP98_RS00615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP98_RS00620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP98_RS00620 PF00005 ABC transporter JCP98_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS00635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCP98_RS00640 PF14622 Ribonuclease-III-like JCP98_RS00640 PF00035 Double-stranded RNA binding motif JCP98_RS00645 PF02463 RecF/RecN/SMC N terminal domain JCP98_RS00645 PF06470 SMC proteins Flexible Hinge Domain JCP98_RS00655 PF00448 SRP54-type protein, GTPase domain JCP98_RS00655 PF02881 SRP54-type protein, helical bundle domain JCP98_RS00660 PF02655 ATP-grasp domain JCP98_RS00660 PF18419 ATP-grasp-like domain JCP98_RS00660 PF04262 Glutamate-cysteine ligase JCP98_RS00670 PF01032 FecCD transport family JCP98_RS00675 PF01032 FecCD transport family JCP98_RS00680 PF00005 ABC transporter JCP98_RS00685 PF01497 Periplasmic binding protein JCP98_RS00710 PF06458 MucBP domain JCP98_RS00725 PF00872 Transposase, Mutator family JCP98_RS00740 PF00230 Major intrinsic protein JCP98_RS00745 PF03788 LrgA family JCP98_RS00750 PF04172 LrgB-like family JCP98_RS00760 PF04172 LrgB-like family JCP98_RS00785 PF02632 BioY family JCP98_RS00790 PF01479 S4 domain JCP98_RS00790 PF00163 Ribosomal protein S4/S9 N-terminal domain JCP98_RS00810 PF13277 YmdB-like protein JCP98_RS00820 PF00488 MutS domain V JCP98_RS00820 PF05188 MutS domain II JCP98_RS00820 PF01624 MutS domain I JCP98_RS00820 PF05192 MutS domain III JCP98_RS00820 PF05190 MutS family domain IV JCP98_RS00825 PF08676 MutL C terminal dimerisation domain JCP98_RS00825 PF01119 DNA mismatch repair protein, C-terminal domain JCP98_RS00830 PF02545 Maf-like protein JCP98_RS00835 PF02378 Phosphotransferase system, EIIC JCP98_RS00835 PF00367 phosphotransferase system, EIIB JCP98_RS00840 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS00840 PF07702 UTRA domain JCP98_RS00845 PF01641 SelR domain JCP98_RS00850 PF07499 RuvA, C-terminal domain JCP98_RS00850 PF01330 RuvA N terminal domain JCP98_RS00855 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCP98_RS00855 PF05491 RuvB C-terminal winged helix domain JCP98_RS00855 PF17864 RuvB AAA lid domain JCP98_RS00865 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCP98_RS00875 PF00872 Transposase, Mutator family JCP98_RS00880 PF05525 Branched-chain amino acid transport protein JCP98_RS00885 PF06736 Protein of unknown function (DUF1211) JCP98_RS00890 PF00324 Amino acid permease JCP98_RS00895 PF00005 ABC transporter JCP98_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS00910 PF02146 Sir2 family JCP98_RS00915 PF14602 Hexapeptide repeat of succinyl-transferase JCP98_RS00915 PF12464 Maltose acetyltransferase JCP98_RS00920 PF08279 HTH domain JCP98_RS00920 PF02829 3H domain JCP98_RS00925 PF01327 Polypeptide deformylase JCP98_RS00930 PF00312 Ribosomal protein S15 JCP98_RS00935 PF00013 KH domain JCP98_RS00935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCP98_RS00935 PF01138 3' exoribonuclease family, domain 1 JCP98_RS00935 PF00575 S1 RNA binding domain JCP98_RS00935 PF03725 3' exoribonuclease family, domain 2 JCP98_RS00945 PF02705 K+ potassium transporter JCP98_RS00950 PF00571 CBS domain JCP98_RS00950 PF03471 Transporter associated domain JCP98_RS00950 PF01595 Cyclin M transmembrane N-terminal domain JCP98_RS00955 PF01554 MatE JCP98_RS00965 PF01386 Ribosomal L25p family JCP98_RS00965 PF14693 Ribosomal protein TL5, C-terminal domain JCP98_RS00970 PF01479 S4 domain JCP98_RS00970 PF00849 RNA pseudouridylate synthase JCP98_RS00975 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS00980 PF00485 Phosphoribulokinase / Uridine kinase family JCP98_RS01005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCP98_RS01010 PF03109 ABC1 family JCP98_RS01015 PF07478 D-ala D-ala ligase C-terminus JCP98_RS01015 PF01820 D-ala D-ala ligase N-terminus JCP98_RS01020 PF08245 Mur ligase middle domain JCP98_RS01020 PF02875 Mur ligase family, glutamate ligase domain JCP98_RS01020 PF01225 Mur ligase family, catalytic domain JCP98_RS01025 PF00271 Helicase conserved C-terminal domain JCP98_RS01025 PF00270 DEAD/DEAH box helicase JCP98_RS01030 PF01648 4'-phosphopantetheinyl transferase superfamily JCP98_RS01035 PF00842 Alanine racemase, C-terminal domain JCP98_RS01035 PF01168 Alanine racemase, N-terminal domain JCP98_RS01040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCP98_RS01045 PF00253 Ribosomal protein S14p/S29e JCP98_RS01050 PF00550 Phosphopantetheine attachment site JCP98_RS01050 PF14765 Polyketide synthase dehydratase JCP98_RS01050 PF08659 KR domain JCP98_RS01050 PF02801 Beta-ketoacyl synthase, C-terminal domain JCP98_RS01050 PF16197 Ketoacyl-synthetase C-terminal extension JCP98_RS01050 PF00698 Acyl transferase domain JCP98_RS01050 PF08240 Alcohol dehydrogenase GroES-like domain JCP98_RS01050 PF00109 Beta-ketoacyl synthase, N-terminal domain JCP98_RS01055 PF01061 ABC-2 type transporter JCP98_RS01060 PF13520 Amino acid permease JCP98_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS01090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCP98_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS01100 PF00005 ABC transporter JCP98_RS01100 PF00571 CBS domain JCP98_RS01105 PF02547 Queuosine biosynthesis protein JCP98_RS01115 PF00690 Cation transporter/ATPase, N-terminus JCP98_RS01115 PF00689 Cation transporting ATPase, C-terminus JCP98_RS01125 PF01702 Queuine tRNA-ribosyltransferase JCP98_RS01130 PF02699 Preprotein translocase subunit JCP98_RS01135 PF00171 Aldehyde dehydrogenase family JCP98_RS01135 PF00465 Iron-containing alcohol dehydrogenase JCP98_RS01145 PF07470 Glycosyl Hydrolase Family 88 JCP98_RS01150 PF03480 Bacterial extracellular solute-binding protein, family 7 JCP98_RS01160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCP98_RS01175 PF12833 Helix-turn-helix domain JCP98_RS01175 PF02311 AraC-like ligand binding domain JCP98_RS01180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP98_RS01180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP98_RS01185 PF06134 L-rhamnose isomerase (RhaA) JCP98_RS01190 PF00596 Class II Aldolase and Adducin N-terminal domain JCP98_RS01195 PF05336 L-rhamnose mutarotase JCP98_RS01200 PF00465 Iron-containing alcohol dehydrogenase JCP98_RS01205 PF09339 IclR helix-turn-helix domain JCP98_RS01205 PF01614 Bacterial transcriptional regulator JCP98_RS01210 PF01081 KDPG and KHG aldolase JCP98_RS01220 PF04962 KduI/IolB family JCP98_RS01230 PF01070 FMN-dependent dehydrogenase JCP98_RS01235 PF08544 GHMP kinases C terminal JCP98_RS01235 PF00288 GHMP kinases N terminal domain JCP98_RS01245 PF10509 Galactokinase galactose-binding signature JCP98_RS01245 PF00288 GHMP kinases N terminal domain JCP98_RS01245 PF08544 GHMP kinases C terminal JCP98_RS01250 PF01712 Deoxynucleoside kinase JCP98_RS01265 PF00872 Transposase, Mutator family JCP98_RS01270 PF05198 Translation initiation factor IF-3, N-terminal domain JCP98_RS01270 PF00707 Translation initiation factor IF-3, C-terminal domain JCP98_RS01275 PF01632 Ribosomal protein L35 JCP98_RS01280 PF00453 Ribosomal protein L20 JCP98_RS01290 PF01968 Hydantoinase/oxoprolinase JCP98_RS01290 PF05378 Hydantoinase/oxoprolinase N-terminal region JCP98_RS01310 PF03061 Thioesterase superfamily JCP98_RS01315 PF01256 Carbohydrate kinase JCP98_RS01320 PF01546 Peptidase family M20/M25/M40 JCP98_RS01325 PF00535 Glycosyl transferase family 2 JCP98_RS01335 PF05343 M42 glutamyl aminopeptidase JCP98_RS01340 PF00085 Thioredoxin JCP98_RS01345 PF00582 Universal stress protein family JCP98_RS01350 PF01588 Putative tRNA binding domain JCP98_RS01350 PF14794 Domain of unknown function (DUF4479) JCP98_RS01355 PF13180 PDZ domain JCP98_RS01360 PF02590 Predicted SPOUT methyltransferase JCP98_RS01365 PF07308 Protein of unknown function (DUF1456) JCP98_RS01375 PF02558 Ketopantoate reductase PanE/ApbA JCP98_RS01375 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCP98_RS01390 PF01625 Peptide methionine sulfoxide reductase JCP98_RS01400 PF13673 Acetyltransferase (GNAT) domain JCP98_RS01450 PF00884 Sulfatase JCP98_RS01460 PF00375 Sodium:dicarboxylate symporter family JCP98_RS01470 PF01416 tRNA pseudouridine synthase JCP98_RS01485 PF00872 Transposase, Mutator family JCP98_RS01500 PF01625 Peptide methionine sulfoxide reductase JCP98_RS01505 PF00248 Aldo/keto reductase family JCP98_RS01510 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS01510 PF07729 FCD domain JCP98_RS01515 PF02378 Phosphotransferase system, EIIC JCP98_RS01520 PF00232 Glycosyl hydrolase family 1 JCP98_RS01525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS01530 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP98_RS01550 PF08240 Alcohol dehydrogenase GroES-like domain JCP98_RS01550 PF13823 Alcohol dehydrogenase GroES-associated JCP98_RS01550 PF00107 Zinc-binding dehydrogenase JCP98_RS01565 PF06100 MCRA family JCP98_RS01595 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCP98_RS01605 PF00324 Amino acid permease JCP98_RS01610 PF00689 Cation transporting ATPase, C-terminus JCP98_RS01610 PF00690 Cation transporter/ATPase, N-terminus JCP98_RS01625 PF03466 LysR substrate binding domain JCP98_RS01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS01630 PF00698 Acyl transferase domain JCP98_RS01635 PF16957 Malonate decarboxylase, alpha subunit, transporter JCP98_RS01640 PF06857 Malonate decarboxylase delta subunit (MdcD) JCP98_RS01645 PF01039 Carboxyl transferase domain JCP98_RS01650 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCP98_RS01660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCP98_RS01670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS01680 PF03611 PTS system sugar-specific permease component JCP98_RS01690 PF01116 Fructose-bisphosphate aldolase class-II JCP98_RS01700 PF00293 NUDIX domain JCP98_RS01705 PF01047 MarR family JCP98_RS01710 PF13673 Acetyltransferase (GNAT) domain JCP98_RS01730 PF00860 Permease family JCP98_RS01735 PF00128 Alpha amylase, catalytic domain JCP98_RS01735 PF16657 Maltogenic Amylase, C-terminal domain JCP98_RS01740 PF00232 Glycosyl hydrolase family 1 JCP98_RS01750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS01750 PF02378 Phosphotransferase system, EIIC JCP98_RS01750 PF00367 phosphotransferase system, EIIB JCP98_RS01755 PF00232 Glycosyl hydrolase family 1 JCP98_RS01765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCP98_RS01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS01775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS01785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP98_RS01785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP98_RS01790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCP98_RS01790 PF01266 FAD dependent oxidoreductase JCP98_RS01795 PF00230 Major intrinsic protein JCP98_RS01805 PF01066 CDP-alcohol phosphatidyltransferase JCP98_RS01815 PF02583 Metal-sensitive transcriptional repressor JCP98_RS01820 PF00581 Rhodanese-like domain JCP98_RS01825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS01825 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS01830 PF13538 UvrD-like helicase C-terminal domain JCP98_RS01840 PF00535 Glycosyl transferase family 2 JCP98_RS01850 PF01906 Putative heavy-metal-binding JCP98_RS01855 PF03610 PTS system fructose IIA component JCP98_RS01860 PF02733 Dak1 domain JCP98_RS01865 PF02734 DAK2 domain JCP98_RS01870 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) JCP98_RS01875 PF13545 Crp-like helix-turn-helix domain JCP98_RS01875 PF00027 Cyclic nucleotide-binding domain JCP98_RS01885 PF13732 Domain of unknown function (DUF4162) JCP98_RS01885 PF00005 ABC transporter JCP98_RS01890 PF16859 Tetracyclin repressor-like, C-terminal domain JCP98_RS01890 PF00440 Bacterial regulatory proteins, tetR family JCP98_RS01900 PF00579 tRNA synthetases class I (W and Y) JCP98_RS01900 PF01479 S4 domain JCP98_RS01905 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCP98_RS01910 PF13520 Amino acid permease JCP98_RS01920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP98_RS01920 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS01930 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS01935 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCP98_RS01935 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCP98_RS01935 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCP98_RS01940 PF02378 Phosphotransferase system, EIIC JCP98_RS01940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS01940 PF00367 phosphotransferase system, EIIB JCP98_RS01945 PF03372 Endonuclease/Exonuclease/phosphatase family JCP98_RS01965 PF05870 Phenolic acid decarboxylase (PAD) JCP98_RS01970 PF03551 Transcriptional regulator PadR-like family JCP98_RS01970 PF10400 Virulence activator alpha C-term JCP98_RS01980 PF07690 Major Facilitator Superfamily JCP98_RS02000 PF02441 Flavoprotein JCP98_RS02005 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCP98_RS02015 PF12704 MacB-like periplasmic core domain JCP98_RS02015 PF02687 FtsX-like permease family JCP98_RS02015 PF00005 ABC transporter JCP98_RS02020 PF00072 Response regulator receiver domain JCP98_RS02020 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS02025 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS02025 PF00072 Response regulator receiver domain JCP98_RS02025 PF09308 LuxQ, periplasmic JCP98_RS02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS02030 PF03466 LysR substrate binding domain JCP98_RS02035 PF04474 Protein of unknown function (DUF554) JCP98_RS02070 PF00005 ABC transporter JCP98_RS02080 PF01263 Aldose 1-epimerase JCP98_RS02085 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS02085 PF05257 CHAP domain JCP98_RS02090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS02090 PF02378 Phosphotransferase system, EIIC JCP98_RS02090 PF00367 phosphotransferase system, EIIB JCP98_RS02095 PF05025 RbsD / FucU transport protein family JCP98_RS02100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCP98_RS02100 PF00294 pfkB family carbohydrate kinase JCP98_RS02105 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS02110 PF00857 Isochorismatase family JCP98_RS02115 PF00005 ABC transporter JCP98_RS02125 PF16657 Maltogenic Amylase, C-terminal domain JCP98_RS02125 PF00128 Alpha amylase, catalytic domain JCP98_RS02130 PF01594 AI-2E family transporter JCP98_RS02135 PF01297 Zinc-uptake complex component A periplasmic JCP98_RS02135 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP98_RS02140 PF04397 LytTr DNA-binding domain JCP98_RS02140 PF00072 Response regulator receiver domain JCP98_RS02150 PF04647 Accessory gene regulator B JCP98_RS02160 PF01712 Deoxynucleoside kinase JCP98_RS02170 PF13361 UvrD-like helicase C-terminal domain JCP98_RS02170 PF00580 UvrD/REP helicase N-terminal domain JCP98_RS02180 PF03960 ArsC family JCP98_RS02185 PF03960 ArsC family JCP98_RS02190 PF13276 HTH-like domain JCP98_RS02190 PF00665 Integrase core domain JCP98_RS02190 PF13333 Integrase core domain JCP98_RS02215 PF00255 Glutathione peroxidase JCP98_RS02220 PF02664 S-Ribosylhomocysteinase (LuxS) JCP98_RS02225 PF01053 Cys/Met metabolism PLP-dependent enzyme JCP98_RS02235 PF00291 Pyridoxal-phosphate dependent enzyme JCP98_RS02240 PF01132 Elongation factor P (EF-P) OB domain JCP98_RS02240 PF09285 Elongation factor P, C-terminal JCP98_RS02240 PF08207 Elongation factor P (EF-P) KOW-like domain JCP98_RS02250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCP98_RS02250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCP98_RS02255 PF01678 Diaminopimelate epimerase JCP98_RS02260 PF00701 Dihydrodipicolinate synthetase family JCP98_RS02265 PF05173 Dihydrodipicolinate reductase, C-terminus JCP98_RS02265 PF01113 Dihydrodipicolinate reductase, N-terminus JCP98_RS02270 PF00132 Bacterial transferase hexapeptide (six repeats) JCP98_RS02270 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JCP98_RS02270 PF14602 Hexapeptide repeat of succinyl-transferase JCP98_RS02275 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCP98_RS02275 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCP98_RS02280 PF13840 ACT domain JCP98_RS02280 PF00696 Amino acid kinase family JCP98_RS02285 PF07687 Peptidase dimerisation domain JCP98_RS02285 PF01546 Peptidase family M20/M25/M40 JCP98_RS02290 PF00155 Aminotransferase class I and II JCP98_RS02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS02295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS02315 PF11798 IMS family HHH motif JCP98_RS02315 PF00817 impB/mucB/samB family JCP98_RS02315 PF11799 impB/mucB/samB family C-terminal domain JCP98_RS02320 PF10509 Galactokinase galactose-binding signature JCP98_RS02320 PF08544 GHMP kinases C terminal JCP98_RS02320 PF00288 GHMP kinases N terminal domain JCP98_RS02325 PF01263 Aldose 1-epimerase JCP98_RS02330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS02335 PF02311 AraC-like ligand binding domain JCP98_RS02335 PF12833 Helix-turn-helix domain JCP98_RS02340 PF02525 Flavodoxin-like fold JCP98_RS02355 PF00324 Amino acid permease JCP98_RS02360 PF00005 ABC transporter JCP98_RS02365 PF00950 ABC 3 transport family JCP98_RS02370 PF01297 Zinc-uptake complex component A periplasmic JCP98_RS02380 PF08331 Domain of unknown function (DUF1730) JCP98_RS02385 PF04972 BON domain JCP98_RS02385 PF01476 LysM domain JCP98_RS02395 PF01266 FAD dependent oxidoreductase JCP98_RS02400 PF07690 Major Facilitator Superfamily JCP98_RS02410 PF01316 Arginine repressor, DNA binding domain JCP98_RS02410 PF02863 Arginine repressor, C-terminal domain JCP98_RS02415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP98_RS02415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP98_RS02415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP98_RS02415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP98_RS02425 PF02566 OsmC-like protein JCP98_RS02430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS02435 PF00857 Isochorismatase family JCP98_RS02440 PF00440 Bacterial regulatory proteins, tetR family JCP98_RS02440 PF16925 Tetracyclin repressor-like, C-terminal domain JCP98_RS02450 PF02586 SOS response associated peptidase (SRAP) JCP98_RS02490 PF05067 Manganese containing catalase JCP98_RS02495 PF01547 Bacterial extracellular solute-binding protein JCP98_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS02545 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS02545 PF00072 Response regulator receiver domain JCP98_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS02555 PF06800 Sugar transport protein JCP98_RS02560 PF13520 Amino acid permease JCP98_RS02565 PF05816 Toxic anion resistance protein (TelA) JCP98_RS02575 PF00293 NUDIX domain JCP98_RS02585 PF01048 Phosphorylase superfamily JCP98_RS02590 PF00857 Isochorismatase family JCP98_RS02595 PF13229 Right handed beta helix region JCP98_RS02600 PF05649 Peptidase family M13 JCP98_RS02600 PF01431 Peptidase family M13 JCP98_RS02610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCP98_RS02610 PF14572 Phosphoribosyl synthetase-associated domain JCP98_RS02615 PF00266 Aminotransferase class-V JCP98_RS02625 PF07690 Major Facilitator Superfamily JCP98_RS02640 PF13520 Amino acid permease JCP98_RS02645 PF00155 Aminotransferase class I and II JCP98_RS02650 PF07690 Major Facilitator Superfamily JCP98_RS02665 PF01751 Toprim domain JCP98_RS02665 PF01131 DNA topoisomerase JCP98_RS02670 PF00535 Glycosyl transferase family 2 JCP98_RS02675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCP98_RS02675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCP98_RS02680 PF03601 Conserved hypothetical protein 698 JCP98_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS02690 PF03466 LysR substrate binding domain JCP98_RS02695 PF01098 Cell cycle protein JCP98_RS02700 PF03960 ArsC family JCP98_RS02705 PF01597 Glycine cleavage H-protein JCP98_RS02710 PF00005 ABC transporter JCP98_RS02710 PF09383 NIL domain JCP98_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS02720 PF03180 NLPA lipoprotein JCP98_RS02725 PF00005 ABC transporter JCP98_RS02730 PF01458 Uncharacterized protein family (UPF0051) JCP98_RS02735 PF00266 Aminotransferase class-V JCP98_RS02740 PF01592 NifU-like N terminal domain JCP98_RS02745 PF01458 Uncharacterized protein family (UPF0051) JCP98_RS02750 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS02750 PF00589 Phage integrase family JCP98_RS02795 PF12161 HsdM N-terminal domain JCP98_RS02795 PF02384 N-6 DNA Methylase JCP98_RS02805 PF18766 SWI2/SNF2 ATPase JCP98_RS02805 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCP98_RS02805 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCP98_RS02825 PF02687 FtsX-like permease family JCP98_RS02825 PF00005 ABC transporter JCP98_RS02825 PF12704 MacB-like periplasmic core domain JCP98_RS02835 PF13145 PPIC-type PPIASE domain JCP98_RS02845 PF00781 Diacylglycerol kinase catalytic domain JCP98_RS02880 PF01638 HxlR-like helix-turn-helix JCP98_RS02885 PF01610 Transposase JCP98_RS02885 PF13683 Integrase core domain JCP98_RS02895 PF04203 Sortase domain JCP98_RS02900 PF03123 CAT RNA binding domain JCP98_RS02900 PF00874 PRD domain JCP98_RS02905 PF02378 Phosphotransferase system, EIIC JCP98_RS02905 PF00367 phosphotransferase system, EIIB JCP98_RS02905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS02910 PF00232 Glycosyl hydrolase family 1 JCP98_RS02915 PF07702 UTRA domain JCP98_RS02915 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS02925 PF03641 Possible lysine decarboxylase JCP98_RS02935 PF01712 Deoxynucleoside kinase JCP98_RS02950 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS02950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP98_RS02955 PF00232 Glycosyl hydrolase family 1 JCP98_RS02965 PF00884 Sulfatase JCP98_RS02975 PF00334 Nucleoside diphosphate kinase JCP98_RS02980 PF00690 Cation transporter/ATPase, N-terminus JCP98_RS02980 PF00689 Cation transporting ATPase, C-terminus JCP98_RS02985 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS02990 PF09383 NIL domain JCP98_RS02990 PF00005 ABC transporter JCP98_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS03000 PF03180 NLPA lipoprotein JCP98_RS03005 PF01546 Peptidase family M20/M25/M40 JCP98_RS03005 PF07687 Peptidase dimerisation domain JCP98_RS03010 PF03553 Na+/H+ antiporter family JCP98_RS03025 PF00324 Amino acid permease JCP98_RS03035 PF02558 Ketopantoate reductase PanE/ApbA JCP98_RS03035 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCP98_RS03040 PF02595 Glycerate kinase family JCP98_RS03045 PF12848 ABC transporter JCP98_RS03045 PF00005 ABC transporter JCP98_RS03050 PF00300 Histidine phosphatase superfamily (branch 1) JCP98_RS03060 PF13580 SIS domain JCP98_RS03065 PF02378 Phosphotransferase system, EIIC JCP98_RS03065 PF00367 phosphotransferase system, EIIB JCP98_RS03070 PF07972 NrdI Flavodoxin like JCP98_RS03075 PF13520 Amino acid permease JCP98_RS03080 PF12679 ABC-2 family transporter protein JCP98_RS03085 PF00005 ABC transporter JCP98_RS03090 PF00893 Small Multidrug Resistance protein JCP98_RS03105 PF01470 Pyroglutamyl peptidase JCP98_RS03120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP98_RS03150 PF03167 Uracil DNA glycosylase superfamily JCP98_RS03155 PF01515 Phosphate acetyl/butaryl transferase JCP98_RS03160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCP98_RS03165 PF13302 Acetyltransferase (GNAT) domain JCP98_RS03170 PF14480 DNA polymerase III polC-type N-terminus I JCP98_RS03170 PF14579 Helix-hairpin-helix motif JCP98_RS03170 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP98_RS03170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP98_RS03170 PF11490 DNA polymerase III polC-type N-terminus II JCP98_RS03170 PF00929 Exonuclease JCP98_RS03170 PF02811 PHP domain JCP98_RS03175 PF03372 Endonuclease/Exonuclease/phosphatase family JCP98_RS03180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS03185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCP98_RS03185 PF01565 FAD binding domain JCP98_RS03210 PF14537 Cytochrome c3 JCP98_RS03210 PF00890 FAD binding domain JCP98_RS03220 PF13460 NAD(P)H-binding JCP98_RS03225 PF12822 ECF transporter, substrate-specific component JCP98_RS03230 PF02441 Flavoprotein JCP98_RS03235 PF02441 Flavoprotein JCP98_RS03235 PF04127 DNA / pantothenate metabolism flavoprotein JCP98_RS03240 PF08240 Alcohol dehydrogenase GroES-like domain JCP98_RS03240 PF00107 Zinc-binding dehydrogenase JCP98_RS03250 PF08402 TOBE domain JCP98_RS03250 PF00005 ABC transporter JCP98_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS03260 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS03265 PF13416 Bacterial extracellular solute-binding protein JCP98_RS03270 PF00158 Sigma-54 interaction domain JCP98_RS03270 PF02954 Bacterial regulatory protein, Fis family JCP98_RS03280 PF03830 PTS system sorbose subfamily IIB component JCP98_RS03285 PF03609 PTS system sorbose-specific iic component JCP98_RS03290 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS03305 PF00480 ROK family JCP98_RS03335 PF14659 Phage integrase, N-terminal SAM-like domain JCP98_RS03335 PF00589 Phage integrase family JCP98_RS03340 PF01717 Cobalamin-independent synthase, Catalytic domain JCP98_RS03350 PF13411 MerR HTH family regulatory protein JCP98_RS03355 PF00120 Glutamine synthetase, catalytic domain JCP98_RS03355 PF03951 Glutamine synthetase, beta-Grasp domain JCP98_RS03360 PF00117 Glutamine amidotransferase class-I JCP98_RS03360 PF06418 CTP synthase N-terminus JCP98_RS03365 PF01116 Fructose-bisphosphate aldolase class-II JCP98_RS03370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP98_RS03375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP98_RS03375 PF07498 Rho termination factor, N-terminal domain JCP98_RS03375 PF07497 Rho termination factor, RNA-binding domain JCP98_RS03380 PF01197 Ribosomal protein L31 JCP98_RS03390 PF02378 Phosphotransferase system, EIIC JCP98_RS03390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS03395 PF01116 Fructose-bisphosphate aldolase class-II JCP98_RS03400 PF00455 DeoR C terminal sensor domain JCP98_RS03400 PF08220 DeoR-like helix-turn-helix domain JCP98_RS03410 PF07690 Major Facilitator Superfamily JCP98_RS03420 PF13545 Crp-like helix-turn-helix domain JCP98_RS03440 PF12169 DNA polymerase III subunits gamma and tau domain III JCP98_RS03445 PF02575 YbaB/EbfC DNA-binding family JCP98_RS03450 PF13662 Toprim domain JCP98_RS03450 PF02132 RecR protein JCP98_RS03455 PF02223 Thymidylate kinase JCP98_RS03460 PF06153 Cyclic-di-AMP receptor JCP98_RS03465 PF09115 DNA polymerase III, delta subunit, C terminal JCP98_RS03470 PF04468 PSP1 C-terminal conserved region JCP98_RS03475 PF06156 Initiation control protein YabA JCP98_RS03480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCP98_RS03485 PF11798 IMS family HHH motif JCP98_RS03485 PF00817 impB/mucB/samB family JCP98_RS03485 PF11799 impB/mucB/samB family C-terminal domain JCP98_RS03495 PF13597 Anaerobic ribonucleoside-triphosphate reductase JCP98_RS03495 PF03477 ATP cone domain JCP98_RS03500 PF00005 ABC transporter JCP98_RS03505 PF02687 FtsX-like permease family JCP98_RS03515 PF13193 AMP-binding enzyme C-terminal domain JCP98_RS03515 PF00501 AMP-binding enzyme JCP98_RS03520 PF03062 MBOAT, membrane-bound O-acyltransferase family JCP98_RS03525 PF00550 Phosphopantetheine attachment site JCP98_RS03530 PF04914 DltD protein JCP98_RS03535 PF05343 M42 glutamyl aminopeptidase JCP98_RS03545 PF12706 Beta-lactamase superfamily domain JCP98_RS03550 PF03099 Biotin/lipoate A/B protein ligase family JCP98_RS03550 PF10437 Bacterial lipoate protein ligase C-terminus JCP98_RS03560 PF00872 Transposase, Mutator family JCP98_RS03580 PF06993 Protein of unknown function (DUF1304) JCP98_RS03585 PF01740 STAS domain JCP98_RS03585 PF00916 Sulfate permease family JCP98_RS03595 PF00829 Ribosomal prokaryotic L21 protein JCP98_RS03605 PF01016 Ribosomal L27 protein JCP98_RS03610 PF01610 Transposase JCP98_RS03610 PF13683 Integrase core domain JCP98_RS03615 PF00874 PRD domain JCP98_RS03615 PF00158 Sigma-54 interaction domain JCP98_RS03615 PF03610 PTS system fructose IIA component JCP98_RS03620 PF03830 PTS system sorbose subfamily IIB component JCP98_RS03620 PF03610 PTS system fructose IIA component JCP98_RS03625 PF03830 PTS system sorbose subfamily IIB component JCP98_RS03625 PF03610 PTS system fructose IIA component JCP98_RS03630 PF03609 PTS system sorbose-specific iic component JCP98_RS03635 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS03645 PF04226 Transglycosylase associated protein JCP98_RS03650 PF01321 Creatinase/Prolidase N-terminal domain JCP98_RS03650 PF00557 Metallopeptidase family M24 JCP98_RS03655 PF03780 Asp23 family, cell envelope-related function JCP98_RS03660 PF01029 NusB family JCP98_RS03665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCP98_RS03665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCP98_RS03670 PF02601 Exonuclease VII, large subunit JCP98_RS03670 PF13742 OB-fold nucleic acid binding domain JCP98_RS03675 PF02609 Exonuclease VII small subunit JCP98_RS03680 PF00348 Polyprenyl synthetase JCP98_RS03685 PF01728 FtsJ-like methyltransferase JCP98_RS03685 PF01479 S4 domain JCP98_RS03690 PF02863 Arginine repressor, C-terminal domain JCP98_RS03690 PF01316 Arginine repressor, DNA binding domain JCP98_RS03695 PF13476 AAA domain JCP98_RS03720 PF02381 MraZ protein, putative antitoxin-like JCP98_RS03725 PF01795 MraW methylase family JCP98_RS03735 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS03735 PF03793 PASTA domain JCP98_RS03735 PF03717 Penicillin-binding Protein dimerisation domain JCP98_RS03740 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JCP98_RS03740 PF00953 Glycosyl transferase family 4 JCP98_RS03745 PF08245 Mur ligase middle domain JCP98_RS03745 PF02875 Mur ligase family, glutamate ligase domain JCP98_RS03750 PF03033 Glycosyltransferase family 28 N-terminal domain JCP98_RS03750 PF04101 Glycosyltransferase family 28 C-terminal domain JCP98_RS03755 PF03799 Cell division protein FtsQ JCP98_RS03755 PF08478 POTRA domain, FtsQ-type JCP98_RS03760 PF11983 Membrane-attachment and polymerisation-promoting switch JCP98_RS03760 PF02491 SHS2 domain inserted in FTSA JCP98_RS03765 PF00091 Tubulin/FtsZ family, GTPase domain JCP98_RS03765 PF12327 FtsZ family, C-terminal domain JCP98_RS03770 PF01168 Alanine racemase, N-terminal domain JCP98_RS03775 PF04472 Cell division protein SepF JCP98_RS03785 PF17774 Putative RNA-binding domain in YlmH JCP98_RS03785 PF01479 S4 domain JCP98_RS03790 PF05103 DivIVA protein JCP98_RS03795 PF08264 Anticodon-binding domain of tRNA JCP98_RS03795 PF06827 Zinc finger found in FPG and IleRS JCP98_RS03795 PF00133 tRNA synthetases class I (I, L, M and V) JCP98_RS03800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JCP98_RS03800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JCP98_RS03815 PF03749 Sugar fermentation stimulation protein RE domain JCP98_RS03815 PF17746 SfsA N-terminal OB domain JCP98_RS03820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS03825 PF00271 Helicase conserved C-terminal domain JCP98_RS03825 PF00270 DEAD/DEAH box helicase JCP98_RS03830 PF00874 PRD domain JCP98_RS03830 PF00158 Sigma-54 interaction domain JCP98_RS03830 PF03610 PTS system fructose IIA component JCP98_RS03835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS03840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP98_RS03845 PF02378 Phosphotransferase system, EIIC JCP98_RS03885 PF00872 Transposase, Mutator family JCP98_RS03890 PF02073 Thermophilic metalloprotease (M29) JCP98_RS03900 PF00258 Flavodoxin JCP98_RS03905 PF00557 Metallopeptidase family M24 JCP98_RS03910 PF03631 Virulence factor BrkB JCP98_RS03915 PF00953 Glycosyl transferase family 4 JCP98_RS03930 PF00535 Glycosyl transferase family 2 JCP98_RS03935 PF00483 Nucleotidyl transferase JCP98_RS03940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JCP98_RS03945 PF16363 GDP-mannose 4,6 dehydratase JCP98_RS03950 PF04321 RmlD substrate binding domain JCP98_RS03965 PF01061 ABC-2 type transporter JCP98_RS03970 PF00005 ABC transporter JCP98_RS03970 PF08239 Bacterial SH3 domain JCP98_RS03975 PF00398 Ribosomal RNA adenine dimethylase JCP98_RS03980 PF00535 Glycosyl transferase family 2 JCP98_RS03995 PF02397 Bacterial sugar transferase JCP98_RS04000 PF00535 Glycosyl transferase family 2 JCP98_RS04005 PF00534 Glycosyl transferases group 1 JCP98_RS04005 PF13439 Glycosyltransferase Family 4 JCP98_RS04030 PF02719 Polysaccharide biosynthesis protein JCP98_RS04035 PF03102 NeuB family JCP98_RS04035 PF08666 SAF domain JCP98_RS04040 PF02350 UDP-N-acetylglucosamine 2-epimerase JCP98_RS04050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JCP98_RS04065 PF02348 Cytidylyltransferase JCP98_RS04070 PF01370 NAD dependent epimerase/dehydratase family JCP98_RS04075 PF01610 Transposase JCP98_RS04075 PF13683 Integrase core domain JCP98_RS04115 PF00872 Transposase, Mutator family JCP98_RS04130 PF02618 YceG-like family JCP98_RS04135 PF03449 Transcription elongation factor, N-terminal JCP98_RS04135 PF01272 Transcription elongation factor, GreA/GreB, C-term JCP98_RS04145 PF07730 Histidine kinase JCP98_RS04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS04145 PF00672 HAMP domain JCP98_RS04150 PF00072 Response regulator receiver domain JCP98_RS04150 PF00196 Bacterial regulatory proteins, luxR family JCP98_RS04155 PF02254 TrkA-N domain JCP98_RS04155 PF02080 TrkA-C domain JCP98_RS04170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP98_RS04180 PF01545 Cation efflux family JCP98_RS04185 PF04138 GtrA-like protein JCP98_RS04190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCP98_RS04190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCP98_RS04195 PF00313 'Cold-shock' DNA-binding domain JCP98_RS04205 PF03816 Cell envelope-related transcriptional attenuator domain JCP98_RS04210 PF03073 TspO/MBR family JCP98_RS04215 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JCP98_RS04220 PF05958 tRNA (Uracil-5-)-methyltransferase JCP98_RS04220 PF01938 TRAM domain JCP98_RS04225 PF02631 RecX family JCP98_RS04230 PF00730 HhH-GPD superfamily base excision DNA repair protein JCP98_RS04230 PF14815 NUDIX domain JCP98_RS04235 PF04167 Protein of unknown function (DUF402) JCP98_RS04240 PF00583 Acetyltransferase (GNAT) family JCP98_RS04245 PF01594 AI-2E family transporter JCP98_RS04250 PF03471 Transporter associated domain JCP98_RS04250 PF01595 Cyclin M transmembrane N-terminal domain JCP98_RS04250 PF00571 CBS domain JCP98_RS04255 PF16658 Class II release factor RF3, C-terminal domain JCP98_RS04255 PF03144 Elongation factor Tu domain 2 JCP98_RS04255 PF00009 Elongation factor Tu GTP binding domain JCP98_RS04275 PF07724 AAA domain (Cdc48 subfamily) JCP98_RS04275 PF10431 C-terminal, D2-small domain, of ClpB protein JCP98_RS04275 PF00004 ATPase family associated with various cellular activities (AAA) JCP98_RS04275 PF17871 AAA lid domain JCP98_RS04280 PF00381 PTS HPr component phosphorylation site JCP98_RS04285 PF00391 PEP-utilising enzyme, mobile domain JCP98_RS04285 PF02896 PEP-utilising enzyme, TIM barrel domain JCP98_RS04285 PF05524 PEP-utilising enzyme, N-terminal JCP98_RS04290 PF13439 Glycosyltransferase Family 4 JCP98_RS04290 PF00534 Glycosyl transferases group 1 JCP98_RS04295 PF00534 Glycosyl transferases group 1 JCP98_RS04295 PF13439 Glycosyltransferase Family 4 JCP98_RS04300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCP98_RS04300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP98_RS04305 PF08796 Protein of unknown function (DUF1797) JCP98_RS04310 PF01541 GIY-YIG catalytic domain JCP98_RS04310 PF02151 UvrB/uvrC motif JCP98_RS04310 PF08459 UvrC Helix-hairpin-helix N-terminal JCP98_RS04315 PF01047 MarR family JCP98_RS04320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCP98_RS04320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCP98_RS04325 PF00550 Phosphopantetheine attachment site JCP98_RS04330 PF00698 Acyl transferase domain JCP98_RS04340 PF00109 Beta-ketoacyl synthase, N-terminal domain JCP98_RS04340 PF02801 Beta-ketoacyl synthase, C-terminal domain JCP98_RS04345 PF00364 Biotin-requiring enzyme JCP98_RS04350 PF07977 FabA-like domain JCP98_RS04355 PF02785 Biotin carboxylase C-terminal domain JCP98_RS04355 PF00289 Biotin carboxylase, N-terminal domain JCP98_RS04355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP98_RS04360 PF01039 Carboxyl transferase domain JCP98_RS04365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCP98_RS04375 PF01926 50S ribosome-binding GTPase JCP98_RS04380 PF01985 CRS1 / YhbY (CRM) domain JCP98_RS04385 PF01467 Cytidylyltransferase-like JCP98_RS04390 PF01966 HD domain JCP98_RS04400 PF13649 Methyltransferase domain JCP98_RS04405 PF05636 HIGH Nucleotidyl Transferase JCP98_RS04410 PF01709 Transcriptional regulator JCP98_RS04420 PF13538 UvrD-like helicase C-terminal domain JCP98_RS04425 PF00403 Heavy-metal-associated domain JCP98_RS04430 PF01361 Tautomerase enzyme JCP98_RS04435 PF02824 TGS domain JCP98_RS04435 PF03129 Anticodon binding domain JCP98_RS04435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP98_RS04435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCP98_RS04440 PF01380 SIS domain JCP98_RS04440 PF01418 Helix-turn-helix domain, rpiR family JCP98_RS04445 PF03717 Penicillin-binding Protein dimerisation domain JCP98_RS04445 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS04465 PF00860 Permease family JCP98_RS04470 PF07690 Major Facilitator Superfamily JCP98_RS04480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP98_RS04480 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP98_RS04480 PF01336 OB-fold nucleic acid binding domain JCP98_RS04480 PF02811 PHP domain JCP98_RS04480 PF14579 Helix-hairpin-helix motif JCP98_RS04485 PF00365 Phosphofructokinase JCP98_RS04490 PF00391 PEP-utilising enzyme, mobile domain JCP98_RS04490 PF00224 Pyruvate kinase, barrel domain JCP98_RS04490 PF02887 Pyruvate kinase, alpha/beta domain JCP98_RS04495 PF03466 LysR substrate binding domain JCP98_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS04505 PF01783 Ribosomal L32p protein family JCP98_RS04520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCP98_RS04520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP98_RS04525 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS04525 PF00072 Response regulator receiver domain JCP98_RS04530 PF18719 ArlS sensor domain JCP98_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS04530 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS04630 PF03123 CAT RNA binding domain JCP98_RS04630 PF00874 PRD domain JCP98_RS04635 PF04794 YdjC-like protein JCP98_RS04640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS04640 PF02378 Phosphotransferase system, EIIC JCP98_RS04640 PF00367 phosphotransferase system, EIIB JCP98_RS04645 PF02056 Family 4 glycosyl hydrolase JCP98_RS04645 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCP98_RS04650 PF02378 Phosphotransferase system, EIIC JCP98_RS04650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS04650 PF00367 phosphotransferase system, EIIB JCP98_RS04655 PF02378 Phosphotransferase system, EIIC JCP98_RS04675 PF08220 DeoR-like helix-turn-helix domain JCP98_RS04675 PF00455 DeoR C terminal sensor domain JCP98_RS04685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS04690 PF03611 PTS system sugar-specific permease component JCP98_RS04700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCP98_RS04705 PF01261 Xylose isomerase-like TIM barrel JCP98_RS04710 PF00596 Class II Aldolase and Adducin N-terminal domain JCP98_RS04715 PF00583 Acetyltransferase (GNAT) family JCP98_RS04735 PF05043 Mga helix-turn-helix domain JCP98_RS04735 PF08279 HTH domain JCP98_RS04735 PF00874 PRD domain JCP98_RS04735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS04735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS04755 PF03611 PTS system sugar-specific permease component JCP98_RS04770 PF01738 Dienelactone hydrolase family JCP98_RS04775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP98_RS04780 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS04780 PF07702 UTRA domain JCP98_RS04785 PF02378 Phosphotransferase system, EIIC JCP98_RS04790 PF00232 Glycosyl hydrolase family 1 JCP98_RS04795 PF00582 Universal stress protein family JCP98_RS04800 PF03551 Transcriptional regulator PadR-like family JCP98_RS04810 PF03960 ArsC family JCP98_RS04820 PF08543 Phosphomethylpyrimidine kinase JCP98_RS04825 PF13091 PLD-like domain JCP98_RS04825 PF13396 Phospholipase_D-nuclease N-terminal JCP98_RS04830 PF00689 Cation transporting ATPase, C-terminus JCP98_RS04830 PF00690 Cation transporter/ATPase, N-terminus JCP98_RS04840 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JCP98_RS04840 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JCP98_RS04845 PF02803 Thiolase, C-terminal domain JCP98_RS04845 PF00108 Thiolase, N-terminal domain JCP98_RS04860 PF00248 Aldo/keto reductase family JCP98_RS04875 PF00009 Elongation factor Tu GTP binding domain JCP98_RS04875 PF03144 Elongation factor Tu domain 2 JCP98_RS04875 PF03143 Elongation factor Tu C-terminal domain JCP98_RS04880 PF03706 Lysylphosphatidylglycerol synthase TM region JCP98_RS04880 PF09924 Uncharacterised conserved protein (DUF2156) JCP98_RS04885 PF00561 alpha/beta hydrolase fold JCP98_RS04905 PF01807 CHC2 zinc finger JCP98_RS04905 PF10410 DnaB-helicase binding domain of primase JCP98_RS04905 PF08275 DNA primase catalytic core, N-terminal domain JCP98_RS04910 PF03979 Sigma-70 factor, region 1.1 JCP98_RS04910 PF04545 Sigma-70, region 4 JCP98_RS04910 PF04539 Sigma-70 region 3 JCP98_RS04910 PF04542 Sigma-70 region 2 JCP98_RS04910 PF00140 Sigma-70 factor, region 1.2 JCP98_RS04915 PF18041 MapZ extracellular domain 1 JCP98_RS04915 PF18708 MapZ extracellular C-terminal domain 2 JCP98_RS04920 PF17783 CvfB-like winged helix domain JCP98_RS04920 PF13509 S1 domain JCP98_RS04925 PF01475 Ferric uptake regulator family JCP98_RS04935 PF00589 Phage integrase family JCP98_RS04935 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS04945 PF02616 Segregation and condensation protein ScpA JCP98_RS04950 PF04079 Segregation and condensation complex subunit ScpB JCP98_RS04955 PF01479 S4 domain JCP98_RS04955 PF00849 RNA pseudouridylate synthase JCP98_RS04960 PF12822 ECF transporter, substrate-specific component JCP98_RS04965 PF03606 C4-dicarboxylate anaerobic carrier JCP98_RS04970 PF01546 Peptidase family M20/M25/M40 JCP98_RS04990 PF00271 Helicase conserved C-terminal domain JCP98_RS04990 PF00270 DEAD/DEAH box helicase JCP98_RS05000 PF02224 Cytidylate kinase JCP98_RS05005 PF00575 S1 RNA binding domain JCP98_RS05010 PF01926 50S ribosome-binding GTPase JCP98_RS05010 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCP98_RS05015 PF00216 Bacterial DNA-binding protein JCP98_RS05035 PF08864 UPF0302 domain JCP98_RS05035 PF08858 IDEAL domain JCP98_RS05040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS05040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP98_RS05045 PF03819 MazG nucleotide pyrophosphohydrolase domain JCP98_RS05050 PF01743 Poly A polymerase head domain JCP98_RS05050 PF13735 tRNA nucleotidyltransferase domain 2 putative JCP98_RS05050 PF12627 Probable RNA and SrmB- binding site of polymerase A JCP98_RS05070 PF00999 Sodium/hydrogen exchanger family JCP98_RS05075 PF12848 ABC transporter JCP98_RS05075 PF16326 ABC transporter C-terminal domain JCP98_RS05075 PF00005 ABC transporter JCP98_RS05080 PF00303 Thymidylate synthase JCP98_RS05085 PF00186 Dihydrofolate reductase JCP98_RS05090 PF03006 Haemolysin-III related JCP98_RS05095 PF02645 Uncharacterised protein, DegV family COG1307 JCP98_RS05100 PF13472 GDSL-like Lipase/Acylhydrolase family JCP98_RS05105 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JCP98_RS05110 PF01625 Peptide methionine sulfoxide reductase JCP98_RS05115 PF06855 YozE SAM-like fold JCP98_RS05120 PF10502 Signal peptidase, peptidase S26 JCP98_RS05140 PF01926 50S ribosome-binding GTPase JCP98_RS05145 PF01351 Ribonuclease HII JCP98_RS05150 PF02481 DNA recombination-mediator protein A JCP98_RS05150 PF18255 DNA processing protein A sterile alpha motif domain JCP98_RS05155 PF01131 DNA topoisomerase JCP98_RS05155 PF01396 Topoisomerase DNA binding C4 zinc finger JCP98_RS05155 PF01751 Toprim domain JCP98_RS05160 PF01134 Glucose inhibited division protein A JCP98_RS05165 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS05165 PF00589 Phage integrase family JCP98_RS05170 PF00227 Proteasome subunit JCP98_RS05175 PF00004 ATPase family associated with various cellular activities (AAA) JCP98_RS05175 PF07724 AAA domain (Cdc48 subfamily) JCP98_RS05175 PF10431 C-terminal, D2-small domain, of ClpB protein JCP98_RS05180 PF06018 CodY GAF-like domain JCP98_RS05180 PF08222 CodY helix-turn-helix domain JCP98_RS05195 PF02660 Glycerol-3-phosphate acyltransferase JCP98_RS05200 PF13380 CoA binding domain JCP98_RS05205 PF01751 Toprim domain JCP98_RS05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS05205 PF00986 DNA gyrase B subunit, carboxyl terminus JCP98_RS05205 PF00204 DNA gyrase B JCP98_RS05210 PF03989 DNA gyrase C-terminal domain, beta-propeller JCP98_RS05210 PF00521 DNA gyrase/topoisomerase IV, subunit A JCP98_RS05215 PF02901 Pyruvate formate lyase-like JCP98_RS05215 PF01228 Glycine radical JCP98_RS05220 PF04055 Radical SAM superfamily JCP98_RS05225 PF02833 DHHA2 domain JCP98_RS05225 PF01368 DHH family JCP98_RS05245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS05255 PF00326 Prolyl oligopeptidase family JCP98_RS05260 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS05270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS05270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP98_RS05280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCP98_RS05285 PF00571 CBS domain JCP98_RS05285 PF00005 ABC transporter JCP98_RS05290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS05290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS05290 PF00403 Heavy-metal-associated domain JCP98_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS05305 PF00005 ABC transporter JCP98_RS05310 PF01026 TatD related DNase JCP98_RS05315 PF05257 CHAP domain JCP98_RS05315 PF01476 LysM domain JCP98_RS05340 PF00872 Transposase, Mutator family JCP98_RS05350 PF13683 Integrase core domain JCP98_RS05350 PF01610 Transposase JCP98_RS05370 PF00155 Aminotransferase class I and II JCP98_RS05380 PF01979 Amidohydrolase family JCP98_RS05390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP98_RS05390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP98_RS05395 PF00072 Response regulator receiver domain JCP98_RS05400 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCP98_RS05400 PF17203 Single cache domain 3 JCP98_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS05400 PF00989 PAS fold JCP98_RS05405 PF00989 PAS fold JCP98_RS05405 PF17203 Single cache domain 3 JCP98_RS05405 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCP98_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS05415 PF15975 Flotillin JCP98_RS05415 PF01145 SPFH domain / Band 7 family JCP98_RS05430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS05430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP98_RS05440 PF02557 D-alanyl-D-alanine carboxypeptidase JCP98_RS05445 PF01476 LysM domain JCP98_RS05445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS05455 PF13416 Bacterial extracellular solute-binding protein JCP98_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS05465 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS05475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS05475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP98_RS05480 PF00156 Phosphoribosyl transferase domain JCP98_RS05485 PF00860 Permease family JCP98_RS05490 PF00731 AIR carboxylase JCP98_RS05495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCP98_RS05495 PF02222 ATP-grasp domain JCP98_RS05500 PF00206 Lyase JCP98_RS05500 PF10397 Adenylosuccinate lyase C-terminus JCP98_RS05510 PF01259 SAICAR synthetase JCP98_RS05515 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JCP98_RS05525 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCP98_RS05525 PF00586 AIR synthase related protein, N-terminal domain JCP98_RS05525 PF02769 AIR synthase related protein, C-terminal domain JCP98_RS05530 PF13537 Glutamine amidotransferase domain JCP98_RS05530 PF00156 Phosphoribosyl transferase domain JCP98_RS05535 PF00586 AIR synthase related protein, N-terminal domain JCP98_RS05535 PF02769 AIR synthase related protein, C-terminal domain JCP98_RS05540 PF00551 Formyl transferase JCP98_RS05545 PF02142 MGS-like domain JCP98_RS05545 PF01808 AICARFT/IMPCHase bienzyme JCP98_RS05550 PF02843 Phosphoribosylglycinamide synthetase, C domain JCP98_RS05550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCP98_RS05550 PF02844 Phosphoribosylglycinamide synthetase, N domain JCP98_RS05555 PF00248 Aldo/keto reductase family JCP98_RS05560 PF00072 Response regulator receiver domain JCP98_RS05560 PF04397 LytTr DNA-binding domain JCP98_RS05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS05565 PF00672 HAMP domain JCP98_RS05565 PF02743 Cache domain JCP98_RS05565 PF06580 Histidine kinase JCP98_RS05575 PF13407 Periplasmic binding protein domain JCP98_RS05580 PF00005 ABC transporter JCP98_RS05585 PF02653 Branched-chain amino acid transport system / permease component JCP98_RS05590 PF00478 IMP dehydrogenase / GMP reductase domain JCP98_RS05595 PF00155 Aminotransferase class I and II JCP98_RS05595 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS05600 PF00676 Dehydrogenase E1 component JCP98_RS05605 PF02779 Transketolase, pyrimidine binding domain JCP98_RS05605 PF02780 Transketolase, C-terminal domain JCP98_RS05610 PF00364 Biotin-requiring enzyme JCP98_RS05610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCP98_RS05610 PF02817 e3 binding domain JCP98_RS05615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS05615 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS05620 PF05256 Uncharacterised protein family (UPF0223) JCP98_RS05625 PF00459 Inositol monophosphatase family JCP98_RS05630 PF03144 Elongation factor Tu domain 2 JCP98_RS05630 PF00009 Elongation factor Tu GTP binding domain JCP98_RS05630 PF14492 Elongation Factor G, domain II JCP98_RS05630 PF00679 Elongation factor G C-terminus JCP98_RS05635 PF16124 RecQ zinc-binding JCP98_RS05635 PF00570 HRDC domain JCP98_RS05635 PF00271 Helicase conserved C-terminal domain JCP98_RS05635 PF00270 DEAD/DEAH box helicase JCP98_RS05635 PF09382 RQC domain JCP98_RS05640 PF07408 Protein of unknown function (DUF1507) JCP98_RS05645 PF01098 Cell cycle protein JCP98_RS05650 PF02436 Conserved carboxylase domain JCP98_RS05650 PF00682 HMGL-like JCP98_RS05650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP98_RS05650 PF02785 Biotin carboxylase C-terminal domain JCP98_RS05650 PF00364 Biotin-requiring enzyme JCP98_RS05650 PF00289 Biotin carboxylase, N-terminal domain JCP98_RS05665 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JCP98_RS05675 PF01467 Cytidylyltransferase-like JCP98_RS05680 PF05362 Lon protease (S16) C-terminal proteolytic domain JCP98_RS05680 PF13180 PDZ domain JCP98_RS05685 PF10531 SLBB domain JCP98_RS05700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCP98_RS05705 PF03772 Competence protein JCP98_RS05705 PF00753 Metallo-beta-lactamase superfamily JCP98_RS05705 PF13567 Domain of unknown function (DUF4131) JCP98_RS05710 PF06144 DNA polymerase III, delta subunit JCP98_RS05715 PF01649 Ribosomal protein S20 JCP98_RS05725 PF04284 Protein of unknown function (DUF441) JCP98_RS05735 PF02673 Bacitracin resistance protein BacA JCP98_RS05745 PF00753 Metallo-beta-lactamase superfamily JCP98_RS05755 PF04461 Protein of unknown function (DUF520) JCP98_RS05760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP98_RS05760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS05765 PF01883 Iron-sulfur cluster assembly protein JCP98_RS05780 PF05257 CHAP domain JCP98_RS05780 PF01476 LysM domain JCP98_RS05840 PF13529 Peptidase_C39 like family JCP98_RS05860 PF00854 POT family JCP98_RS05870 PF12705 PD-(D/E)XK nuclease superfamily JCP98_RS05875 PF00580 UvrD/REP helicase N-terminal domain JCP98_RS05875 PF13361 UvrD-like helicase C-terminal domain JCP98_RS05875 PF12705 PD-(D/E)XK nuclease superfamily JCP98_RS05880 PF01638 HxlR-like helix-turn-helix JCP98_RS05885 PF01409 tRNA synthetases class II core domain (F) JCP98_RS05885 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCP98_RS05890 PF03484 tRNA synthetase B5 domain JCP98_RS05890 PF03147 Ferredoxin-fold anticodon binding domain JCP98_RS05890 PF01588 Putative tRNA binding domain JCP98_RS05890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCP98_RS05890 PF03483 B3/4 domain JCP98_RS05895 PF00579 tRNA synthetases class I (W and Y) JCP98_RS05900 PF00005 ABC transporter JCP98_RS05905 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP98_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS05915 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS05920 PF01177 Asp/Glu/Hydantoin racemase JCP98_RS05925 PF03725 3' exoribonuclease family, domain 2 JCP98_RS05925 PF01138 3' exoribonuclease family, domain 1 JCP98_RS05940 PF00924 Mechanosensitive ion channel JCP98_RS05945 PF01063 Amino-transferase class IV JCP98_RS05955 PF07977 FabA-like domain JCP98_RS05960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCP98_RS05980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCP98_RS05980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCP98_RS05985 PF01926 50S ribosome-binding GTPase JCP98_RS05985 PF01018 GTP1/OBG JCP98_RS05985 PF09269 Domain of unknown function (DUF1967) JCP98_RS05995 PF00753 Metallo-beta-lactamase superfamily JCP98_RS05995 PF12706 Beta-lactamase superfamily domain JCP98_RS06000 PF00106 short chain dehydrogenase JCP98_RS06005 PF06305 Lipopolysaccharide assembly protein A domain JCP98_RS06010 PF01368 DHH family JCP98_RS06010 PF02272 DHHA1 domain JCP98_RS06010 PF17768 RecJ OB domain JCP98_RS06010 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JCP98_RS06015 PF00156 Phosphoribosyl transferase domain JCP98_RS06025 PF00717 Peptidase S24-like JCP98_RS06025 PF01726 LexA DNA binding domain JCP98_RS06030 PF05979 Bacterial protein of unknown function (DUF896) JCP98_RS06035 PF02779 Transketolase, pyrimidine binding domain JCP98_RS06035 PF00456 Transketolase, thiamine diphosphate binding domain JCP98_RS06035 PF02780 Transketolase, C-terminal domain JCP98_RS06045 PF01476 LysM domain JCP98_RS06045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS06050 PF00291 Pyridoxal-phosphate dependent enzyme JCP98_RS06055 PF01475 Ferric uptake regulator family JCP98_RS06060 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS06060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS06070 PF01047 MarR family JCP98_RS06075 PF07690 Major Facilitator Superfamily JCP98_RS06080 PF07261 Replication initiation and membrane attachment JCP98_RS06085 PF10576 Iron-sulfur binding domain of endonuclease III JCP98_RS06085 PF00633 Helix-hairpin-helix motif JCP98_RS06085 PF00730 HhH-GPD superfamily base excision DNA repair protein JCP98_RS06095 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS06095 PF00912 Transglycosylase JCP98_RS06100 PF03838 Recombination protein U JCP98_RS06105 PF06908 YspA SLOG family JCP98_RS06110 PF05103 DivIVA protein JCP98_RS06120 PF02926 THUMP domain JCP98_RS06120 PF01170 Putative RNA methylase family UPF0020 JCP98_RS06125 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JCP98_RS06130 PF01966 HD domain JCP98_RS06135 PF00155 Aminotransferase class I and II JCP98_RS06140 PF01370 NAD dependent epimerase/dehydratase family JCP98_RS06145 PF13520 Amino acid permease JCP98_RS06160 PF00270 DEAD/DEAH box helicase JCP98_RS06160 PF00271 Helicase conserved C-terminal domain JCP98_RS06165 PF13673 Acetyltransferase (GNAT) domain JCP98_RS06170 PF02272 DHHA1 domain JCP98_RS06170 PF01411 tRNA synthetases class II (A) JCP98_RS06170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCP98_RS06175 PF12822 ECF transporter, substrate-specific component JCP98_RS06185 PF13456 Reverse transcriptase-like JCP98_RS06190 PF17255 EbsA-like protein JCP98_RS06195 PF00313 'Cold-shock' DNA-binding domain JCP98_RS06200 PF01268 Formate--tetrahydrofolate ligase JCP98_RS06215 PF01252 Signal peptidase (SPase) II JCP98_RS06220 PF00849 RNA pseudouridylate synthase JCP98_RS06220 PF01479 S4 domain JCP98_RS06225 PF00156 Phosphoribosyl transferase domain JCP98_RS06230 PF00860 Permease family JCP98_RS06235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCP98_RS06235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCP98_RS06240 PF01979 Amidohydrolase family JCP98_RS06245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCP98_RS06245 PF00117 Glutamine amidotransferase class-I JCP98_RS06250 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCP98_RS06250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCP98_RS06250 PF02142 MGS-like domain JCP98_RS06255 PF00970 Oxidoreductase FAD-binding domain JCP98_RS06255 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JCP98_RS06260 PF01180 Dihydroorotate dehydrogenase JCP98_RS06265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCP98_RS06270 PF00156 Phosphoribosyl transferase domain JCP98_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS06290 PF03466 LysR substrate binding domain JCP98_RS06295 PF05670 NFACT protein RNA binding domain JCP98_RS06310 PF02653 Branched-chain amino acid transport system / permease component JCP98_RS06315 PF00005 ABC transporter JCP98_RS06320 PF08501 Shikimate dehydrogenase substrate binding domain JCP98_RS06320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCP98_RS06325 PF03816 Cell envelope-related transcriptional attenuator domain JCP98_RS06335 PF01131 DNA topoisomerase JCP98_RS06335 PF01751 Toprim domain JCP98_RS06355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCP98_RS06355 PF00056 lactate/malate dehydrogenase, NAD binding domain JCP98_RS06360 PF02311 AraC-like ligand binding domain JCP98_RS06360 PF12833 Helix-turn-helix domain JCP98_RS06375 PF03611 PTS system sugar-specific permease component JCP98_RS06385 PF05043 Mga helix-turn-helix domain JCP98_RS06385 PF00874 PRD domain JCP98_RS06385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS06385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS06385 PF08279 HTH domain JCP98_RS06395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS06395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP98_RS06435 PF00005 ABC transporter JCP98_RS06445 PF00072 Response regulator receiver domain JCP98_RS06445 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS06450 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS06455 PF11181 Heat induced stress protein YflT JCP98_RS06455 PF09557 Domain of unknown function (DUF2382) JCP98_RS06480 PF08543 Phosphomethylpyrimidine kinase JCP98_RS06490 PF04260 Protein of unknown function (DUF436) JCP98_RS06495 PF16657 Maltogenic Amylase, C-terminal domain JCP98_RS06495 PF00128 Alpha amylase, catalytic domain JCP98_RS06510 PF02645 Uncharacterised protein, DegV family COG1307 JCP98_RS06515 PF01943 Polysaccharide biosynthesis protein JCP98_RS06515 PF14667 Polysaccharide biosynthesis C-terminal domain JCP98_RS06530 PF01545 Cation efflux family JCP98_RS06530 PF16916 Dimerisation domain of Zinc Transporter JCP98_RS06560 PF08903 Domain of unknown function (DUF1846) JCP98_RS06565 PF07662 Na+ dependent nucleoside transporter C-terminus JCP98_RS06565 PF01773 Na+ dependent nucleoside transporter N-terminus JCP98_RS06570 PF00625 Guanylate kinase JCP98_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS06600 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP98_RS06605 PF01425 Amidase JCP98_RS06610 PF01180 Dihydroorotate dehydrogenase JCP98_RS06635 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS06640 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS06645 PF13416 Bacterial extracellular solute-binding protein JCP98_RS06650 PF02903 Alpha amylase, N-terminal ig-like domain JCP98_RS06650 PF00128 Alpha amylase, catalytic domain JCP98_RS06655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP98_RS06655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS06665 PF02566 OsmC-like protein JCP98_RS06670 PF01047 MarR family JCP98_RS06675 PF01594 AI-2E family transporter JCP98_RS06690 PF03786 D-mannonate dehydratase (UxuA) JCP98_RS06695 PF08125 Mannitol dehydrogenase C-terminal domain JCP98_RS06695 PF01232 Mannitol dehydrogenase Rossmann domain JCP98_RS06705 PF00578 AhpC/TSA family JCP98_RS06710 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS06710 PF13192 Thioredoxin domain JCP98_RS06725 PF00999 Sodium/hydrogen exchanger family JCP98_RS06730 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS06730 PF03717 Penicillin-binding Protein dimerisation domain JCP98_RS06730 PF05223 NTF2-like N-terminal transpeptidase domain JCP98_RS06735 PF03816 Cell envelope-related transcriptional attenuator domain JCP98_RS06740 PF01098 Cell cycle protein JCP98_RS06750 PF01613 Flavin reductase like domain JCP98_RS06755 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCP98_RS06765 PF02779 Transketolase, pyrimidine binding domain JCP98_RS06765 PF02780 Transketolase, C-terminal domain JCP98_RS06765 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCP98_RS06775 PF04960 Glutaminase JCP98_RS06795 PF02486 Replication initiation factor JCP98_RS06795 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP98_RS06810 PF13683 Integrase core domain JCP98_RS06810 PF01610 Transposase JCP98_RS06815 PF01872 RibD C-terminal domain JCP98_RS06825 PF00186 Dihydrofolate reductase JCP98_RS06835 PF00909 Ammonium Transporter Family JCP98_RS06840 PF04226 Transglycosylase associated protein JCP98_RS06845 PF03780 Asp23 family, cell envelope-related function JCP98_RS06865 PF11188 Protein of unknown function (DUF2975) JCP98_RS06870 PF13443 Cro/C1-type HTH DNA-binding domain JCP98_RS06885 PF04226 Transglycosylase associated protein JCP98_RS06890 PF03780 Asp23 family, cell envelope-related function JCP98_RS06920 PF01501 Glycosyl transferase family 8 JCP98_RS06925 PF01501 Glycosyl transferase family 8 JCP98_RS06955 PF01381 Helix-turn-helix JCP98_RS06975 PF00313 'Cold-shock' DNA-binding domain JCP98_RS06990 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS06995 PF03786 D-mannonate dehydratase (UxuA) JCP98_RS07015 PF03830 PTS system sorbose subfamily IIB component JCP98_RS07020 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS07030 PF00465 Iron-containing alcohol dehydrogenase JCP98_RS07040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP98_RS07040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP98_RS07045 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCP98_RS07045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCP98_RS07050 PF01380 SIS domain JCP98_RS07050 PF01418 Helix-turn-helix domain, rpiR family JCP98_RS07050 PF02685 Glucokinase JCP98_RS07060 PF00135 Carboxylesterase family JCP98_RS07065 PF12146 Serine aminopeptidase, S33 JCP98_RS07075 PF03960 ArsC family JCP98_RS07100 PF13145 PPIC-type PPIASE domain JCP98_RS07105 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCP98_RS07120 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JCP98_RS07120 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JCP98_RS07125 PF03608 PTS system enzyme II sorbitol-specific factor JCP98_RS07135 PF08279 HTH domain JCP98_RS07135 PF05043 Mga helix-turn-helix domain JCP98_RS07135 PF00874 PRD domain JCP98_RS07135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS07140 PF00106 short chain dehydrogenase JCP98_RS07160 PF00872 Transposase, Mutator family JCP98_RS07170 PF00589 Phage integrase family JCP98_RS07170 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS07175 PF00589 Phage integrase family JCP98_RS07175 PF14659 Phage integrase, N-terminal SAM-like domain JCP98_RS07195 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCP98_RS07195 PF00703 Glycosyl hydrolases family 2 JCP98_RS07195 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCP98_RS07200 PF00933 Glycosyl hydrolase family 3 N terminal domain JCP98_RS07220 PF02614 Glucuronate isomerase JCP98_RS07225 PF03786 D-mannonate dehydratase (UxuA) JCP98_RS07230 PF01232 Mannitol dehydrogenase Rossmann domain JCP98_RS07230 PF08125 Mannitol dehydrogenase C-terminal domain JCP98_RS07235 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS07235 PF07702 UTRA domain JCP98_RS07295 PF12648 TcpE family JCP98_RS07335 PF02486 Replication initiation factor JCP98_RS07335 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP98_RS07395 PF00679 Elongation factor G C-terminus JCP98_RS07395 PF03144 Elongation factor Tu domain 2 JCP98_RS07395 PF06421 GTP-binding protein LepA C-terminus JCP98_RS07395 PF00009 Elongation factor Tu GTP binding domain JCP98_RS07415 PF10431 C-terminal, D2-small domain, of ClpB protein JCP98_RS07415 PF17871 AAA lid domain JCP98_RS07415 PF07724 AAA domain (Cdc48 subfamily) JCP98_RS07415 PF02861 Clp amino terminal domain, pathogenicity island component JCP98_RS07415 PF00004 ATPase family associated with various cellular activities (AAA) JCP98_RS07430 PF00781 Diacylglycerol kinase catalytic domain JCP98_RS07435 PF07687 Peptidase dimerisation domain JCP98_RS07435 PF01546 Peptidase family M20/M25/M40 JCP98_RS07440 PF01784 NIF3 (NGG1p interacting factor 3) JCP98_RS07445 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JCP98_RS07455 PF01695 IstB-like ATP binding protein JCP98_RS07455 PF07319 Primosomal protein DnaI N-terminus JCP98_RS07465 PF03477 ATP cone domain JCP98_RS07475 PF01121 Dephospho-CoA kinase JCP98_RS07480 PF06827 Zinc finger found in FPG and IleRS JCP98_RS07480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCP98_RS07480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCP98_RS07485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCP98_RS07485 PF01367 5'-3' exonuclease, C-terminal SAM fold JCP98_RS07485 PF00476 DNA polymerase family A JCP98_RS07490 PF01027 Inhibitor of apoptosis-promoting Bax1 JCP98_RS07500 PF08245 Mur ligase middle domain JCP98_RS07500 PF02875 Mur ligase family, glutamate ligase domain JCP98_RS07500 PF01225 Mur ligase family, catalytic domain JCP98_RS07505 PF02698 DUF218 domain JCP98_RS07510 PF10263 SprT-like family JCP98_RS07515 PF16921 Tex protein YqgF-like domain JCP98_RS07515 PF09371 Tex-like protein N-terminal domain JCP98_RS07515 PF00575 S1 RNA binding domain JCP98_RS07515 PF17674 HHH domain JCP98_RS07525 PF00581 Rhodanese-like domain JCP98_RS07525 PF17773 UPF0176 acylphosphatase like domain JCP98_RS07525 PF12368 Rhodanase C-terminal JCP98_RS07530 PF13683 Integrase core domain JCP98_RS07530 PF01610 Transposase JCP98_RS07540 PF00375 Sodium:dicarboxylate symporter family JCP98_RS07545 PF01610 Transposase JCP98_RS07545 PF13683 Integrase core domain JCP98_RS07555 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS07560 PF00300 Histidine phosphatase superfamily (branch 1) JCP98_RS07580 PF07556 Protein of unknown function (DUF1538) JCP98_RS07585 PF07556 Protein of unknown function (DUF1538) JCP98_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS07595 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS07600 PF13416 Bacterial extracellular solute-binding protein JCP98_RS07605 PF00072 Response regulator receiver domain JCP98_RS07605 PF12833 Helix-turn-helix domain JCP98_RS07610 PF12833 Helix-turn-helix domain JCP98_RS07615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS07615 PF06580 Histidine kinase JCP98_RS07615 PF00672 HAMP domain JCP98_RS07615 PF02743 Cache domain JCP98_RS07620 PF00800 Prephenate dehydratase JCP98_RS07625 PF01202 Shikimate kinase JCP98_RS07630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP98_RS07635 PF01842 ACT domain JCP98_RS07635 PF02153 Prephenate dehydrogenase JCP98_RS07640 PF01264 Chorismate synthase JCP98_RS07645 PF01761 3-dehydroquinate synthase JCP98_RS07650 PF00793 DAHP synthetase I family JCP98_RS07650 PF18152 DAHP synthase ferredoxin-like domain JCP98_RS07655 PF02929 Beta galactosidase small chain JCP98_RS07660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCP98_RS07660 PF00703 Glycosyl hydrolases family 2 JCP98_RS07660 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCP98_RS07665 PF16875 Glycosyl hydrolase family 36 N-terminal domain JCP98_RS07665 PF16874 Glycosyl hydrolase family 36 C-terminal domain JCP98_RS07670 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS07680 PF01717 Cobalamin-independent synthase, Catalytic domain JCP98_RS07690 PF05958 tRNA (Uracil-5-)-methyltransferase JCP98_RS07695 PF00781 Diacylglycerol kinase catalytic domain JCP98_RS07700 PF02637 GatB domain JCP98_RS07700 PF02934 GatB/GatE catalytic domain JCP98_RS07705 PF01425 Amidase JCP98_RS07710 PF02686 Glu-tRNAGln amidotransferase C subunit JCP98_RS07715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCP98_RS07715 PF01653 NAD-dependent DNA ligase adenylation domain JCP98_RS07715 PF12826 Helix-hairpin-helix motif JCP98_RS07715 PF00533 BRCA1 C Terminus (BRCT) domain JCP98_RS07715 PF03120 NAD-dependent DNA ligase OB-fold domain JCP98_RS07720 PF00580 UvrD/REP helicase N-terminal domain JCP98_RS07720 PF13361 UvrD-like helicase C-terminal domain JCP98_RS07725 PF00654 Voltage gated chloride channel JCP98_RS07730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS07730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS07735 PF00294 pfkB family carbohydrate kinase JCP98_RS07740 PF00455 DeoR C terminal sensor domain JCP98_RS07740 PF08220 DeoR-like helix-turn-helix domain JCP98_RS07760 PF01926 50S ribosome-binding GTPase JCP98_RS07765 PF06689 ClpX C4-type zinc finger JCP98_RS07765 PF10431 C-terminal, D2-small domain, of ClpB protein JCP98_RS07765 PF07724 AAA domain (Cdc48 subfamily) JCP98_RS07770 PF05697 Bacterial trigger factor protein (TF) JCP98_RS07770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCP98_RS07770 PF05698 Bacterial trigger factor protein (TF) C-terminus JCP98_RS07780 PF06271 RDD family JCP98_RS07785 PF01343 Peptidase family S49 JCP98_RS07795 PF01380 SIS domain JCP98_RS07805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP98_RS07805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP98_RS07805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP98_RS07805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP98_RS07815 PF02457 DisA bacterial checkpoint controller nucleotide-binding JCP98_RS07820 PF12838 4Fe-4S dicluster domain JCP98_RS07820 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JCP98_RS07820 PF10371 Domain of unknown function JCP98_RS07820 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JCP98_RS07820 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JCP98_RS07820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP98_RS07855 PF00872 Transposase, Mutator family JCP98_RS07875 PF02650 WhiA C-terminal HTH domain JCP98_RS07875 PF14527 WhiA LAGLIDADG-like domain JCP98_RS07875 PF10298 WhiA N-terminal LAGLIDADG-like domain JCP98_RS07880 PF01933 Uncharacterised protein family UPF0052 JCP98_RS07885 PF03668 P-loop ATPase protein family JCP98_RS07890 PF01177 Asp/Glu/Hydantoin racemase JCP98_RS07900 PF00005 ABC transporter JCP98_RS07900 PF17760 UvrA interaction domain JCP98_RS07900 PF17755 UvrA DNA-binding domain JCP98_RS07905 PF17757 UvrB interaction domain JCP98_RS07905 PF12344 Ultra-violet resistance protein B JCP98_RS07905 PF02151 UvrB/uvrC motif JCP98_RS07905 PF04851 Type III restriction enzyme, res subunit JCP98_RS07905 PF00271 Helicase conserved C-terminal domain JCP98_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS07915 PF00005 ABC transporter JCP98_RS07920 PF00226 DnaJ domain JCP98_RS07920 PF01556 DnaJ C terminal domain JCP98_RS07920 PF00684 DnaJ central domain JCP98_RS07925 PF00012 Hsp70 protein JCP98_RS07930 PF01025 GrpE JCP98_RS07935 PF01628 HrcA protein C terminal domain JCP98_RS07940 PF04055 Radical SAM superfamily JCP98_RS07940 PF06969 HemN C-terminal domain JCP98_RS07950 PF13683 Integrase core domain JCP98_RS07950 PF01610 Transposase JCP98_RS07985 PF01965 DJ-1/PfpI family JCP98_RS07995 PF17676 LD-carboxypeptidase C-terminal domain JCP98_RS07995 PF02016 LD-carboxypeptidase N-terminal domain JCP98_RS08005 PF08818 Domain of unknown function (DU1801) JCP98_RS08010 PF12728 Helix-turn-helix domain JCP98_RS08015 PF06800 Sugar transport protein JCP98_RS08030 PF01687 Riboflavin kinase JCP98_RS08030 PF06574 FAD synthetase JCP98_RS08035 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCP98_RS08035 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCP98_RS08040 PF09364 XFP N-terminal domain JCP98_RS08040 PF09363 XFP C-terminal domain JCP98_RS08040 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JCP98_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS08050 PF02033 Ribosome-binding factor A JCP98_RS08055 PF11987 Translation-initiation factor 2 JCP98_RS08055 PF00009 Elongation factor Tu GTP binding domain JCP98_RS08055 PF04760 Translation initiation factor IF-2, N-terminal region JCP98_RS08060 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JCP98_RS08065 PF04296 Protein of unknown function (DUF448) JCP98_RS08070 PF13184 NusA-like KH domain JCP98_RS08070 PF08529 NusA N-terminal domain JCP98_RS08070 PF00575 S1 RNA binding domain JCP98_RS08075 PF02576 RimP N-terminal domain JCP98_RS08075 PF17384 RimP C-terminal SH3 domain JCP98_RS08080 PF02811 PHP domain JCP98_RS08080 PF00929 Exonuclease JCP98_RS08080 PF14579 Helix-hairpin-helix motif JCP98_RS08080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCP98_RS08080 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCP98_RS08080 PF11490 DNA polymerase III polC-type N-terminus II JCP98_RS08080 PF14480 DNA polymerase III polC-type N-terminus I JCP98_RS08085 PF04073 Aminoacyl-tRNA editing domain JCP98_RS08085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP98_RS08085 PF03129 Anticodon binding domain JCP98_RS08090 PF02163 Peptidase family M50 JCP98_RS08090 PF17820 PDZ domain JCP98_RS08100 PF01255 Putative undecaprenyl diphosphate synthase JCP98_RS08110 PF01765 Ribosome recycling factor JCP98_RS08115 PF00696 Amino acid kinase family JCP98_RS08120 PF00889 Elongation factor TS JCP98_RS08125 PF00318 Ribosomal protein S2 JCP98_RS08130 PF02863 Arginine repressor, C-terminal domain JCP98_RS08130 PF01316 Arginine repressor, DNA binding domain JCP98_RS08135 PF00266 Aminotransferase class-V JCP98_RS08140 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS08145 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS08150 PF00750 tRNA synthetases class I (R) JCP98_RS08150 PF05746 DALR anticodon binding domain JCP98_RS08150 PF03485 Arginyl tRNA synthetase N terminal domain JCP98_RS08155 PF00696 Amino acid kinase family JCP98_RS08160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCP98_RS08160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCP98_RS08170 PF13545 Crp-like helix-turn-helix domain JCP98_RS08170 PF00027 Cyclic nucleotide-binding domain JCP98_RS08180 PF00814 Glycoprotease family JCP98_RS08185 PF00583 Acetyltransferase (GNAT) family JCP98_RS08190 PF00583 Acetyltransferase (GNAT) family JCP98_RS08195 PF00814 Glycoprotease family JCP98_RS08205 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS08210 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JCP98_RS08210 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JCP98_RS08215 PF16363 GDP-mannose 4,6 dehydratase JCP98_RS08230 PF04343 Protein of unknown function, DUF488 JCP98_RS08235 PF00581 Rhodanese-like domain JCP98_RS08240 PF00480 ROK family JCP98_RS08255 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCP98_RS08260 PF01032 FecCD transport family JCP98_RS08265 PF01032 FecCD transport family JCP98_RS08270 PF00005 ABC transporter JCP98_RS08280 PF00186 Dihydrofolate reductase JCP98_RS08285 PF00471 Ribosomal protein L33 JCP98_RS08290 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JCP98_RS08295 PF00733 Asparagine synthase JCP98_RS08295 PF13537 Glutamine amidotransferase domain JCP98_RS08300 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCP98_RS08310 PF00440 Bacterial regulatory proteins, tetR family JCP98_RS08310 PF08359 YsiA-like protein, C-terminal region JCP98_RS08330 PF02627 Carboxymuconolactone decarboxylase family JCP98_RS08345 PF03009 Glycerophosphoryl diester phosphodiesterase family JCP98_RS08375 PF00342 Phosphoglucose isomerase JCP98_RS08380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCP98_RS08380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCP98_RS08390 PF04073 Aminoacyl-tRNA editing domain JCP98_RS08395 PF01487 Type I 3-dehydroquinase JCP98_RS08400 PF17785 PUA-like domain JCP98_RS08400 PF10672 S-adenosylmethionine-dependent methyltransferase JCP98_RS08405 PF00884 Sulfatase JCP98_RS08420 PF00672 HAMP domain JCP98_RS08420 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS08425 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS08425 PF00072 Response regulator receiver domain JCP98_RS08450 PF00872 Transposase, Mutator family JCP98_RS08465 PF00872 Transposase, Mutator family JCP98_RS08480 PF13185 GAF domain JCP98_RS08485 PF03306 Alpha-acetolactate decarboxylase JCP98_RS08490 PF00205 Thiamine pyrophosphate enzyme, central domain JCP98_RS08490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCP98_RS08490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCP98_RS08500 PF00872 Transposase, Mutator family JCP98_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS08520 PF03466 LysR substrate binding domain JCP98_RS08525 PF13411 MerR HTH family regulatory protein JCP98_RS08530 PF07690 Major Facilitator Superfamily JCP98_RS08590 PF00589 Phage integrase family JCP98_RS08590 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS08615 PF13817 IS66 C-terminal element JCP98_RS08615 PF13007 Transposase C of IS166 homeodomain JCP98_RS08615 PF13005 zinc-finger binding domain of transposase IS66 JCP98_RS08615 PF03050 Transposase IS66 family JCP98_RS08635 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCP98_RS08635 PF08244 Glycosyl hydrolases family 32 C terminal JCP98_RS08645 PF03830 PTS system sorbose subfamily IIB component JCP98_RS08645 PF03610 PTS system fructose IIA component JCP98_RS08650 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS08655 PF03609 PTS system sorbose-specific iic component JCP98_RS08660 PF03610 PTS system fructose IIA component JCP98_RS08660 PF00874 PRD domain JCP98_RS08660 PF00158 Sigma-54 interaction domain JCP98_RS08665 PF00480 ROK family JCP98_RS08670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS08675 PF02378 Phosphotransferase system, EIIC JCP98_RS08675 PF00367 phosphotransferase system, EIIB JCP98_RS08685 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS08695 PF12802 MarR family JCP98_RS08710 PF01609 Transposase DDE domain JCP98_RS08720 PF01695 IstB-like ATP binding protein JCP98_RS08730 PF00877 NlpC/P60 family JCP98_RS08745 PF00872 Transposase, Mutator family JCP98_RS08780 PF01348 Type II intron maturase JCP98_RS08780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP98_RS08790 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP98_RS08790 PF02486 Replication initiation factor JCP98_RS08800 PF00145 C-5 cytosine-specific DNA methylase JCP98_RS08835 PF01245 Ribosomal protein L19 JCP98_RS08840 PF01746 tRNA (Guanine-1)-methyltransferase JCP98_RS08845 PF01782 RimM N-terminal domain JCP98_RS08845 PF05239 PRC-barrel domain JCP98_RS08860 PF00886 Ribosomal protein S16 JCP98_RS08865 PF03358 NADPH-dependent FMN reductase JCP98_RS08870 PF01872 RibD C-terminal domain JCP98_RS08875 PF00958 GMP synthase C terminal domain JCP98_RS08875 PF03352 Methyladenine glycosylase JCP98_RS08875 PF13302 Acetyltransferase (GNAT) domain JCP98_RS08875 PF13673 Acetyltransferase (GNAT) domain JCP98_RS08875 PF00117 Glutamine amidotransferase class-I JCP98_RS08880 PF00448 SRP54-type protein, GTPase domain JCP98_RS08880 PF02978 Signal peptide binding domain JCP98_RS08880 PF02881 SRP54-type protein, helical bundle domain JCP98_RS08885 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JCP98_RS08895 PF00072 Response regulator receiver domain JCP98_RS08895 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS08900 PF16736 Single Cache-like JCP98_RS08900 PF00989 PAS fold JCP98_RS08900 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS08910 PF01610 Transposase JCP98_RS08910 PF13683 Integrase core domain JCP98_RS08915 PF12849 PBP superfamily domain JCP98_RS08940 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCP98_RS08960 PF00872 Transposase, Mutator family JCP98_RS09000 PF17863 AAA lid domain JCP98_RS09000 PF07726 ATPase family associated with various cellular activities (AAA) JCP98_RS09025 PF00403 Heavy-metal-associated domain JCP98_RS09030 PF00403 Heavy-metal-associated domain JCP98_RS09035 PF03965 Penicillinase repressor JCP98_RS09045 PF13520 Amino acid permease JCP98_RS09050 PF00403 Heavy-metal-associated domain JCP98_RS09065 PF13472 GDSL-like Lipase/Acylhydrolase family JCP98_RS09070 PF00152 tRNA synthetases class II (D, K and N) JCP98_RS09070 PF01336 OB-fold nucleic acid binding domain JCP98_RS09075 PF00155 Aminotransferase class I and II JCP98_RS09085 PF13307 Helicase C-terminal domain JCP98_RS09085 PF04851 Type III restriction enzyme, res subunit JCP98_RS09085 PF00929 Exonuclease JCP98_RS09100 PF00313 'Cold-shock' DNA-binding domain JCP98_RS09125 PF00768 D-alanyl-D-alanine carboxypeptidase JCP98_RS09125 PF07943 Penicillin-binding protein 5, C-terminal domain JCP98_RS09135 PF00654 Voltage gated chloride channel JCP98_RS09150 PF00588 SpoU rRNA Methylase family JCP98_RS09150 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCP98_RS09155 PF00708 Acylphosphatase JCP98_RS09160 PF02096 60Kd inner membrane protein JCP98_RS09165 PF01791 DeoC/LacD family aldolase JCP98_RS09195 PF13439 Glycosyltransferase Family 4 JCP98_RS09195 PF00534 Glycosyl transferases group 1 JCP98_RS09215 PF00535 Glycosyl transferase family 2 JCP98_RS09220 PF00534 Glycosyl transferases group 1 JCP98_RS09220 PF13439 Glycosyltransferase Family 4 JCP98_RS09240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCP98_RS09240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCP98_RS09240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCP98_RS09245 PF02397 Bacterial sugar transferase JCP98_RS09255 PF13614 AAA domain JCP98_RS09260 PF13807 G-rich domain on putative tyrosine kinase JCP98_RS09260 PF02706 Chain length determinant protein JCP98_RS09265 PF03816 Cell envelope-related transcriptional attenuator domain JCP98_RS09275 PF02092 Glycyl-tRNA synthetase beta subunit JCP98_RS09275 PF05746 DALR anticodon binding domain JCP98_RS09280 PF02091 Glycyl-tRNA synthetase alpha subunit JCP98_RS09285 PF02565 Recombination protein O C terminal JCP98_RS09285 PF11967 Recombination protein O N terminal JCP98_RS09290 PF07650 KH domain JCP98_RS09290 PF01926 50S ribosome-binding GTPase JCP98_RS09295 PF01219 Prokaryotic diacylglycerol kinase JCP98_RS09300 PF02130 Uncharacterized protein family UPF0054 JCP98_RS09305 PF07698 7TM receptor with intracellular HD hydrolase JCP98_RS09305 PF07697 7TM-HD extracellular JCP98_RS09305 PF01966 HD domain JCP98_RS09310 PF02562 PhoH-like protein JCP98_RS09315 PF05525 Branched-chain amino acid transport protein JCP98_RS09320 PF09424 Yqey-like protein JCP98_RS09325 PF01165 Ribosomal protein S21 JCP98_RS09330 PF01475 Ferric uptake regulator family JCP98_RS09335 PF03618 Kinase/pyrophosphorylase JCP98_RS09340 PF01022 Bacterial regulatory protein, arsR family JCP98_RS09345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCP98_RS09345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCP98_RS09345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCP98_RS09345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCP98_RS09350 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS09355 PF00232 Glycosyl hydrolase family 1 JCP98_RS09360 PF02056 Family 4 glycosyl hydrolase JCP98_RS09360 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCP98_RS09365 PF01418 Helix-turn-helix domain, rpiR family JCP98_RS09365 PF01380 SIS domain JCP98_RS09370 PF00367 phosphotransferase system, EIIB JCP98_RS09370 PF02378 Phosphotransferase system, EIIC JCP98_RS09370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS09380 PF00005 ABC transporter JCP98_RS09380 PF00664 ABC transporter transmembrane region JCP98_RS09385 PF00664 ABC transporter transmembrane region JCP98_RS09385 PF00005 ABC transporter JCP98_RS09390 PF03672 Uncharacterised protein family (UPF0154) JCP98_RS09395 PF01566 Natural resistance-associated macrophage protein JCP98_RS09405 PF01261 Xylose isomerase-like TIM barrel JCP98_RS09410 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS09410 PF00912 Transglycosylase JCP98_RS09415 PF00872 Transposase, Mutator family JCP98_RS09450 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS09455 PF00557 Metallopeptidase family M24 JCP98_RS09455 PF01321 Creatinase/Prolidase N-terminal domain JCP98_RS09460 PF12732 YtxH-like protein JCP98_RS09470 PF00483 Nucleotidyl transferase JCP98_RS09475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCP98_RS09475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCP98_RS09480 PF01790 Prolipoprotein diacylglyceryl transferase JCP98_RS09485 PF07475 HPr Serine kinase C-terminal domain JCP98_RS09485 PF02603 HPr Serine kinase N terminus JCP98_RS09490 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JCP98_RS09515 PF01895 PhoU domain JCP98_RS09520 PF00005 ABC transporter JCP98_RS09525 PF00005 ABC transporter JCP98_RS09530 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS09535 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS09540 PF12849 PBP superfamily domain JCP98_RS09545 PF13396 Phospholipase_D-nuclease N-terminal JCP98_RS09545 PF13091 PLD-like domain JCP98_RS09550 PF02687 FtsX-like permease family JCP98_RS09550 PF18075 FtsX extracellular domain JCP98_RS09555 PF00005 ABC transporter JCP98_RS09565 PF02810 SEC-C motif JCP98_RS09565 PF07516 SecA Wing and Scaffold domain JCP98_RS09565 PF07517 SecA DEAD-like domain JCP98_RS09565 PF01043 SecA preprotein cross-linking domain JCP98_RS09570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCP98_RS09570 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JCP98_RS09580 PF04851 Type III restriction enzyme, res subunit JCP98_RS09580 PF00271 Helicase conserved C-terminal domain JCP98_RS09585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS09595 PF01205 Uncharacterized protein family UPF0029 JCP98_RS09595 PF09186 Domain of unknown function (DUF1949) JCP98_RS09600 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS09600 PF07702 UTRA domain JCP98_RS09625 PF00480 ROK family JCP98_RS09635 PF01809 Putative membrane protein insertion efficiency factor JCP98_RS09645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCP98_RS09660 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JCP98_RS09660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCP98_RS09665 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP98_RS09665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP98_RS09670 PF00231 ATP synthase JCP98_RS09675 PF00306 ATP synthase alpha/beta chain, C terminal domain JCP98_RS09675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP98_RS09675 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP98_RS09680 PF00213 ATP synthase delta (OSCP) subunit JCP98_RS09685 PF00430 ATP synthase B/B' CF(0) JCP98_RS09690 PF00137 ATP synthase subunit C JCP98_RS09695 PF00119 ATP synthase A chain JCP98_RS09705 PF12146 Serine aminopeptidase, S33 JCP98_RS09710 PF03840 Preprotein translocase SecG subunit JCP98_RS09715 PF14542 GCN5-related N-acetyl-transferase JCP98_RS09725 PF01156 Inosine-uridine preferring nucleoside hydrolase JCP98_RS09735 PF01546 Peptidase family M20/M25/M40 JCP98_RS09735 PF07687 Peptidase dimerisation domain JCP98_RS09740 PF03952 Enolase, N-terminal domain JCP98_RS09740 PF00113 Enolase, C-terminal TIM barrel domain JCP98_RS09745 PF00121 Triosephosphate isomerase JCP98_RS09750 PF00162 Phosphoglycerate kinase JCP98_RS09755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCP98_RS09755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCP98_RS09760 PF04198 Putative sugar-binding domain JCP98_RS09765 PF04552 Sigma-54, DNA binding domain JCP98_RS09765 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCP98_RS09765 PF04963 Sigma-54 factor, core binding domain JCP98_RS09775 PF01522 Polysaccharide deacetylase JCP98_RS09780 PF11738 Protein of unknown function (DUF3298) JCP98_RS09780 PF13739 Deacetylase PdaC JCP98_RS09785 PF04542 Sigma-70 region 2 JCP98_RS09785 PF08281 Sigma-70, region 4 JCP98_RS09790 PF05066 HB1, ASXL, restriction endonuclease HTH domain JCP98_RS09800 PF03099 Biotin/lipoate A/B protein ligase family JCP98_RS09805 PF01966 HD domain JCP98_RS09815 PF00293 NUDIX domain JCP98_RS09820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCP98_RS09825 PF02567 Phenazine biosynthesis-like protein JCP98_RS09830 PF02423 Ornithine cyclodeaminase/mu-crystallin family JCP98_RS09835 PF00155 Aminotransferase class I and II JCP98_RS09835 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS09840 PF02386 Cation transport protein JCP98_RS09845 PF01813 ATP synthase subunit D JCP98_RS09850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP98_RS09850 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP98_RS09855 PF16886 ATPsynthase alpha/beta subunit N-term extension JCP98_RS09855 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCP98_RS09855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCP98_RS09860 PF01990 ATP synthase (F/14-kDa) subunit JCP98_RS09865 PF01992 ATP synthase (C/AC39) subunit JCP98_RS09875 PF00137 ATP synthase subunit C JCP98_RS09880 PF01496 V-type ATPase 116kDa subunit family JCP98_RS09890 PF07722 Peptidase C26 JCP98_RS09895 PF06874 Firmicute fructose-1,6-bisphosphatase JCP98_RS09905 PF13732 Domain of unknown function (DUF4162) JCP98_RS09905 PF00005 ABC transporter JCP98_RS09910 PF01541 GIY-YIG catalytic domain JCP98_RS09910 PF02151 UvrB/uvrC motif JCP98_RS09910 PF08459 UvrC Helix-hairpin-helix N-terminal JCP98_RS09915 PF00085 Thioredoxin JCP98_RS09920 PF01713 Smr domain JCP98_RS09920 PF00488 MutS domain V JCP98_RS09935 PF11858 Domain of unknown function (DUF3378) JCP98_RS09935 PF01351 Ribonuclease HII JCP98_RS09940 PF13683 Integrase core domain JCP98_RS09940 PF01610 Transposase JCP98_RS09945 PF01520 N-acetylmuramoyl-L-alanine amidase JCP98_RS09945 PF00395 S-layer homology domain JCP98_RS09955 PF00005 ABC transporter JCP98_RS09965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS09965 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS09995 PF01070 FMN-dependent dehydrogenase JCP98_RS10005 PF03949 Malic enzyme, NAD binding domain JCP98_RS10005 PF00390 Malic enzyme, N-terminal domain JCP98_RS10010 PF03390 2-hydroxycarboxylate transporter family JCP98_RS10045 PF04860 Phage portal protein JCP98_RS10125 PF00589 Phage integrase family JCP98_RS10125 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS10135 PF06949 Protein of unknown function (DUF1292) JCP98_RS10140 PF03652 Holliday junction resolvase JCP98_RS10145 PF06135 IreB regulatory phosphoprotein JCP98_RS10175 PF00005 ABC transporter JCP98_RS10185 PF09323 Domain of unknown function (DUF1980) JCP98_RS10190 PF03773 Predicted permease JCP98_RS10195 PF00085 Thioredoxin JCP98_RS10200 PF02629 CoA binding domain JCP98_RS10200 PF06971 Putative DNA-binding protein N-terminus JCP98_RS10205 PF12848 ABC transporter JCP98_RS10205 PF00005 ABC transporter JCP98_RS10205 PF16326 ABC transporter C-terminal domain JCP98_RS10210 PF07470 Glycosyl Hydrolase Family 88 JCP98_RS10220 PF07470 Glycosyl Hydrolase Family 88 JCP98_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS10245 PF07883 Cupin domain JCP98_RS10245 PF12833 Helix-turn-helix domain JCP98_RS10250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS10250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS10260 PF16360 GTP-binding GTPase Middle Region JCP98_RS10260 PF13167 GTP-binding GTPase N-terminal JCP98_RS10260 PF01926 50S ribosome-binding GTPase JCP98_RS10270 PF03009 Glycerophosphoryl diester phosphodiesterase family JCP98_RS10280 PF00574 Clp protease JCP98_RS10285 PF00132 Bacterial transferase hexapeptide (six repeats) JCP98_RS10295 PF00664 ABC transporter transmembrane region JCP98_RS10295 PF00005 ABC transporter JCP98_RS10300 PF00005 ABC transporter JCP98_RS10300 PF00664 ABC transporter transmembrane region JCP98_RS10305 PF07288 Protein of unknown function (DUF1447) JCP98_RS10310 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCP98_RS10310 PF17770 Ribonuclease J C-terminal domain JCP98_RS10310 PF00753 Metallo-beta-lactamase superfamily JCP98_RS10320 PF00313 'Cold-shock' DNA-binding domain JCP98_RS10355 PF00872 Transposase, Mutator family JCP98_RS10410 PF01551 Peptidase family M23 JCP98_RS10410 PF01464 Transglycosylase SLT domain JCP98_RS10410 PF10145 Phage-related minor tail protein JCP98_RS10555 PF00308 Bacterial dnaA protein JCP98_RS10555 PF11638 DnaA N-terminal domain JCP98_RS10555 PF08299 Bacterial dnaA protein helix-turn-helix JCP98_RS10565 PF03837 RecT family JCP98_RS10570 PF09588 YqaJ-like viral recombinase domain JCP98_RS10610 PF01381 Helix-turn-helix JCP98_RS10620 PF00239 Resolvase, N terminal domain JCP98_RS10620 PF07508 Recombinase JCP98_RS10620 PF13408 Recombinase zinc beta ribbon domain JCP98_RS10625 PF04002 RadC-like JAB domain JCP98_RS10630 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS10635 PF08245 Mur ligase middle domain JCP98_RS10635 PF02875 Mur ligase family, glutamate ligase domain JCP98_RS10640 PF10458 Valyl tRNA synthetase tRNA binding arm JCP98_RS10640 PF00133 tRNA synthetases class I (I, L, M and V) JCP98_RS10640 PF08264 Anticodon-binding domain of tRNA JCP98_RS10645 PF06971 Putative DNA-binding protein N-terminus JCP98_RS10645 PF02629 CoA binding domain JCP98_RS10650 PF02568 Thiamine biosynthesis protein (ThiI) JCP98_RS10650 PF02926 THUMP domain JCP98_RS10655 PF00266 Aminotransferase class-V JCP98_RS10665 PF06160 Septation ring formation regulator, EzrA JCP98_RS10680 PF01904 Protein of unknown function DUF72 JCP98_RS10685 PF00710 Asparaginase, N-terminal JCP98_RS10685 PF17763 Glutaminase/Asparaginase C-terminal domain JCP98_RS10695 PF03881 Fructosamine kinase JCP98_RS10700 PF03051 Peptidase C1-like family JCP98_RS10750 PF13005 zinc-finger binding domain of transposase IS66 JCP98_RS10750 PF13007 Transposase C of IS166 homeodomain JCP98_RS10750 PF13817 IS66 C-terminal element JCP98_RS10750 PF03050 Transposase IS66 family JCP98_RS10785 PF00575 S1 RNA binding domain JCP98_RS10790 PF00155 Aminotransferase class I and II JCP98_RS10795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCP98_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS10810 PF04608 Phosphatidylglycerophosphatase A JCP98_RS10820 PF13344 Haloacid dehalogenase-like hydrolase JCP98_RS10825 PF06265 Protein of unknown function (DUF1027) JCP98_RS10830 PF02872 5'-nucleotidase, C-terminal domain JCP98_RS10845 PF14437 MafB19-like deaminase JCP98_RS10850 PF13556 PucR C-terminal helix-turn-helix domain JCP98_RS10860 PF01189 16S rRNA methyltransferase RsmB/F JCP98_RS10860 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JCP98_RS10860 PF17126 RsmF rRNA methyltransferase first C-terminal domain JCP98_RS10875 PF04298 Putative neutral zinc metallopeptidase JCP98_RS10880 PF03831 PhnA domain JCP98_RS10880 PF08274 PhnA Zinc-Ribbon JCP98_RS10885 PF02272 DHHA1 domain JCP98_RS10885 PF01368 DHH family JCP98_RS10890 PF03061 Thioesterase superfamily JCP98_RS10890 PF00571 CBS domain JCP98_RS10890 PF07085 DRTGG domain JCP98_RS10890 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS10895 PF12706 Beta-lactamase superfamily domain JCP98_RS10910 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCP98_RS10910 PF00753 Metallo-beta-lactamase superfamily JCP98_RS10910 PF17770 Ribonuclease J C-terminal domain JCP98_RS10915 PF12704 MacB-like periplasmic core domain JCP98_RS10915 PF02687 FtsX-like permease family JCP98_RS10920 PF00005 ABC transporter JCP98_RS10930 PF01979 Amidohydrolase family JCP98_RS10935 PF03606 C4-dicarboxylate anaerobic carrier JCP98_RS10940 PF13580 SIS domain JCP98_RS10950 PF00483 Nucleotidyl transferase JCP98_RS10955 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCP98_RS10955 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCP98_RS10960 PF13580 SIS domain JCP98_RS10965 PF01380 SIS domain JCP98_RS10970 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS10975 PF03609 PTS system sorbose-specific iic component JCP98_RS10980 PF03830 PTS system sorbose subfamily IIB component JCP98_RS10990 PF00158 Sigma-54 interaction domain JCP98_RS10990 PF00874 PRD domain JCP98_RS11000 PF00005 ABC transporter JCP98_RS11000 PF00664 ABC transporter transmembrane region JCP98_RS11005 PF00005 ABC transporter JCP98_RS11005 PF00664 ABC transporter transmembrane region JCP98_RS11015 PF02142 MGS-like domain JCP98_RS11020 PF03459 TOBE domain JCP98_RS11020 PF17912 MalK OB fold domain JCP98_RS11020 PF00005 ABC transporter JCP98_RS11030 PF00398 Ribosomal RNA adenine dimethylase JCP98_RS11035 PF01751 Toprim domain JCP98_RS11035 PF13331 Domain of unknown function (DUF4093) JCP98_RS11040 PF01026 TatD related DNase JCP98_RS11045 PF13520 Amino acid permease JCP98_RS11055 PF01588 Putative tRNA binding domain JCP98_RS11055 PF09334 tRNA synthetases class I (M) JCP98_RS11055 PF08264 Anticodon-binding domain of tRNA JCP98_RS11070 PF01385 Probable transposase JCP98_RS11070 PF12323 Helix-turn-helix domain JCP98_RS11070 PF07282 Putative transposase DNA-binding domain JCP98_RS11075 PF00005 ABC transporter JCP98_RS11075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP98_RS11080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCP98_RS11080 PF00005 ABC transporter JCP98_RS11085 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11085 PF12911 N-terminal TM domain of oligopeptide transport permease C JCP98_RS11090 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCP98_RS11105 PF00583 Acetyltransferase (GNAT) family JCP98_RS11115 PF04055 Radical SAM superfamily JCP98_RS11120 PF17854 FtsK alpha domain JCP98_RS11120 PF09397 Ftsk gamma domain JCP98_RS11120 PF01580 FtsK/SpoIIIE family JCP98_RS11125 PF00232 Glycosyl hydrolase family 1 JCP98_RS11130 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCP98_RS11135 PF00005 ABC transporter JCP98_RS11140 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11150 PF17802 Prealbumin-like fold domain JCP98_RS11150 PF05737 Collagen binding domain JCP98_RS11150 PF05738 Cna protein B-type domain JCP98_RS11155 PF00872 Transposase, Mutator family JCP98_RS11190 PF07859 alpha/beta hydrolase fold JCP98_RS11195 PF00464 Serine hydroxymethyltransferase JCP98_RS11200 PF01300 Telomere recombination JCP98_RS11200 PF03481 Putative GTP-binding controlling metal-binding JCP98_RS11210 PF05175 Methyltransferase small domain JCP98_RS11210 PF17827 PrmC N-terminal domain JCP98_RS11215 PF00472 RF-1 domain JCP98_RS11215 PF03462 PCRF domain JCP98_RS11220 PF00265 Thymidine kinase JCP98_RS11230 PF01209 ubiE/COQ5 methyltransferase family JCP98_RS11235 PF10502 Signal peptidase, peptidase S26 JCP98_RS11250 PF02677 Epoxyqueuosine reductase QueH JCP98_RS11255 PF02386 Cation transport protein JCP98_RS11260 PF08245 Mur ligase middle domain JCP98_RS11260 PF08353 Domain of unknown function (DUF1727) JCP98_RS11265 PF07685 CobB/CobQ-like glutamine amidotransferase domain JCP98_RS11270 PF01232 Mannitol dehydrogenase Rossmann domain JCP98_RS11270 PF08125 Mannitol dehydrogenase C-terminal domain JCP98_RS11275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS11280 PF02378 Phosphotransferase system, EIIC JCP98_RS11280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS11285 PF00005 ABC transporter JCP98_RS11295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS11315 PF02378 Phosphotransferase system, EIIC JCP98_RS11315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS11320 PF01238 Phosphomannose isomerase type I JCP98_RS11325 PF00144 Beta-lactamase JCP98_RS11335 PF00005 ABC transporter JCP98_RS11335 PF00664 ABC transporter transmembrane region JCP98_RS11340 PF00664 ABC transporter transmembrane region JCP98_RS11340 PF00005 ABC transporter JCP98_RS11355 PF02525 Flavodoxin-like fold JCP98_RS11365 PF01594 AI-2E family transporter JCP98_RS11375 PF10282 Lactonase, 7-bladed beta-propeller JCP98_RS11390 PF00884 Sulfatase JCP98_RS11400 PF11762 L-arabinose isomerase C-terminal domain JCP98_RS11400 PF02610 L-arabinose isomerase JCP98_RS11405 PF00596 Class II Aldolase and Adducin N-terminal domain JCP98_RS11415 PF00083 Sugar (and other) transporter JCP98_RS11420 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS11425 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JCP98_RS11425 PF04616 Glycosyl hydrolases family 43 JCP98_RS11430 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCP98_RS11440 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11445 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11455 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCP98_RS11465 PF02540 NAD synthase JCP98_RS11470 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCP98_RS11470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCP98_RS11470 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JCP98_RS11480 PF07739 TipAS antibiotic-recognition domain JCP98_RS11480 PF13411 MerR HTH family regulatory protein JCP98_RS11485 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS11485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP98_RS11495 PF00872 Transposase, Mutator family JCP98_RS11515 PF00118 TCP-1/cpn60 chaperonin family JCP98_RS11520 PF00166 Chaperonin 10 Kd subunit JCP98_RS11530 PF02378 Phosphotransferase system, EIIC JCP98_RS11540 PF00753 Metallo-beta-lactamase superfamily JCP98_RS11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS11555 PF00672 HAMP domain JCP98_RS11555 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS11555 PF13426 PAS domain JCP98_RS11560 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS11560 PF00072 Response regulator receiver domain JCP98_RS11565 PF02645 Uncharacterised protein, DegV family COG1307 JCP98_RS11595 PF01721 Class II bacteriocin JCP98_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS11605 PF00005 ABC transporter JCP98_RS11605 PF00571 CBS domain JCP98_RS11610 PF07729 FCD domain JCP98_RS11610 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS11620 PF07670 Nucleoside recognition JCP98_RS11620 PF02421 Ferrous iron transport protein B JCP98_RS11620 PF17910 FeoB cytosolic helical domain JCP98_RS11620 PF07664 Ferrous iron transport protein B C terminus JCP98_RS11630 PF00462 Glutaredoxin JCP98_RS11635 PF08343 Ribonucleotide reductase N-terminal JCP98_RS11635 PF00317 Ribonucleotide reductase, all-alpha domain JCP98_RS11635 PF02867 Ribonucleotide reductase, barrel domain JCP98_RS11640 PF00268 Ribonucleotide reductase, small chain JCP98_RS11645 PF01594 AI-2E family transporter JCP98_RS11650 PF02308 MgtC family JCP98_RS11655 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JCP98_RS11660 PF00005 ABC transporter JCP98_RS11660 PF12848 ABC transporter JCP98_RS11675 PF07690 Major Facilitator Superfamily JCP98_RS11685 PF00542 Ribosomal protein L7/L12 C-terminal domain JCP98_RS11685 PF16320 Ribosomal protein L7/L12 dimerisation domain JCP98_RS11690 PF00466 Ribosomal protein L10 JCP98_RS11695 PF00687 Ribosomal protein L1p/L10e family JCP98_RS11700 PF03946 Ribosomal protein L11, N-terminal domain JCP98_RS11700 PF00298 Ribosomal protein L11, RNA binding domain JCP98_RS11705 PF01842 ACT domain JCP98_RS11705 PF03315 Serine dehydratase beta chain JCP98_RS11710 PF03313 Serine dehydratase alpha chain JCP98_RS11715 PF01070 FMN-dependent dehydrogenase JCP98_RS11720 PF00561 alpha/beta hydrolase fold JCP98_RS11725 PF00467 KOW motif JCP98_RS11725 PF02357 Transcription termination factor nusG JCP98_RS11730 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCP98_RS11735 PF00471 Ribosomal protein L33 JCP98_RS11750 PF00781 Diacylglycerol kinase catalytic domain JCP98_RS11765 PF00005 ABC transporter JCP98_RS11770 PF07730 Histidine kinase JCP98_RS11775 PF00196 Bacterial regulatory proteins, luxR family JCP98_RS11775 PF00072 Response regulator receiver domain JCP98_RS11785 PF14490 Helix-hairpin-helix containing domain JCP98_RS11785 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JCP98_RS11785 PF13538 UvrD-like helicase C-terminal domain JCP98_RS11795 PF00588 SpoU rRNA Methylase family JCP98_RS11800 PF01209 ubiE/COQ5 methyltransferase family JCP98_RS11805 PF03932 CutC family JCP98_RS11810 PF03448 MgtE intracellular N domain JCP98_RS11810 PF00571 CBS domain JCP98_RS11810 PF01769 Divalent cation transporter JCP98_RS11815 PF00849 RNA pseudouridylate synthase JCP98_RS11820 PF01513 ATP-NAD kinase JCP98_RS11825 PF04607 Region found in RelA / SpoT proteins JCP98_RS11830 PF01928 CYTH domain JCP98_RS11840 PF13683 Integrase core domain JCP98_RS11840 PF01610 Transposase JCP98_RS11845 PF01432 Peptidase family M3 JCP98_RS11845 PF08439 Oligopeptidase F JCP98_RS11855 PF05389 Negative regulator of genetic competence (MecA) JCP98_RS11860 PF03960 ArsC family JCP98_RS11870 PF00271 Helicase conserved C-terminal domain JCP98_RS11870 PF00176 SNF2 family N-terminal domain JCP98_RS11870 PF04434 SWIM zinc finger JCP98_RS11875 PF13476 AAA domain JCP98_RS11880 PF00149 Calcineurin-like phosphoesterase JCP98_RS11880 PF12320 Type 5 capsule protein repressor C-terminal domain JCP98_RS11885 PF01553 Acyltransferase JCP98_RS11890 PF05175 Methyltransferase small domain JCP98_RS11895 PF01541 GIY-YIG catalytic domain JCP98_RS11900 PF01757 Acyltransferase family JCP98_RS11905 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCP98_RS11905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCP98_RS11910 PF01336 OB-fold nucleic acid binding domain JCP98_RS11910 PF00152 tRNA synthetases class II (D, K and N) JCP98_RS11910 PF02938 GAD domain JCP98_RS11915 PF03129 Anticodon binding domain JCP98_RS11915 PF13393 Histidyl-tRNA synthetase JCP98_RS11920 PF00248 Aldo/keto reductase family JCP98_RS11925 PF00067 Cytochrome P450 JCP98_RS11930 PF02580 D-Tyr-tRNA(Tyr) deacylase JCP98_RS11935 PF02824 TGS domain JCP98_RS11935 PF04607 Region found in RelA / SpoT proteins JCP98_RS11935 PF13291 ACT domain JCP98_RS11940 PF04452 RNA methyltransferase JCP98_RS11955 PF02245 Methylpurine-DNA glycosylase (MPG) JCP98_RS11960 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCP98_RS11960 PF16193 AAA C-terminal domain JCP98_RS11960 PF12002 MgsA AAA+ ATPase C terminal JCP98_RS11975 PF00582 Universal stress protein family JCP98_RS11985 PF16326 ABC transporter C-terminal domain JCP98_RS11985 PF00005 ABC transporter JCP98_RS11985 PF12848 ABC transporter JCP98_RS11990 PF00871 Acetokinase family JCP98_RS11995 PF02384 N-6 DNA Methylase JCP98_RS12020 PF07963 Prokaryotic N-terminal methylation motif JCP98_RS12025 PF00482 Type II secretion system (T2SS), protein F JCP98_RS12030 PF00437 Type II/IV secretion system protein JCP98_RS12035 PF13382 Adenine deaminase C-terminal domain JCP98_RS12035 PF01979 Amidohydrolase family JCP98_RS12040 PF02390 Putative methyltransferase JCP98_RS12050 PF05975 Bacterial ABC transporter protein EcsB JCP98_RS12055 PF00005 ABC transporter JCP98_RS12060 PF01230 HIT domain JCP98_RS12070 PF13145 PPIC-type PPIASE domain JCP98_RS12075 PF01336 OB-fold nucleic acid binding domain JCP98_RS12075 PF01966 HD domain JCP98_RS12080 PF13514 AAA domain JCP98_RS12085 PF00149 Calcineurin-like phosphoesterase JCP98_RS12120 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JCP98_RS12120 PF04616 Glycosyl hydrolases family 43 JCP98_RS12135 PF01738 Dienelactone hydrolase family JCP98_RS12140 PF00295 Glycosyl hydrolases family 28 JCP98_RS12145 PF07470 Glycosyl Hydrolase Family 88 JCP98_RS12150 PF13416 Bacterial extracellular solute-binding protein JCP98_RS12160 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS12165 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS12170 PF12833 Helix-turn-helix domain JCP98_RS12170 PF17853 GGDEF-like domain JCP98_RS12175 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS12180 PF08125 Mannitol dehydrogenase C-terminal domain JCP98_RS12180 PF01232 Mannitol dehydrogenase Rossmann domain JCP98_RS12185 PF08666 SAF domain JCP98_RS12185 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JCP98_RS12190 PF02614 Glucuronate isomerase JCP98_RS12195 PF00657 GDSL-like Lipase/Acylhydrolase JCP98_RS12205 PF00664 ABC transporter transmembrane region JCP98_RS12205 PF00005 ABC transporter JCP98_RS12210 PF06133 Control of competence regulator ComK, YlbF/YmcA JCP98_RS12215 PF00912 Transglycosylase JCP98_RS12215 PF00905 Penicillin binding protein transpeptidase domain JCP98_RS12220 PF00849 RNA pseudouridylate synthase JCP98_RS12220 PF01479 S4 domain JCP98_RS12225 PF00480 ROK family JCP98_RS12230 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 JCP98_RS12230 PF01074 Glycosyl hydrolases family 38 N-terminal domain JCP98_RS12230 PF09261 Alpha mannosidase middle domain JCP98_RS12230 PF07748 Glycosyl hydrolases family 38 C-terminal domain JCP98_RS12230 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain JCP98_RS12240 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS12250 PF00072 Response regulator receiver domain JCP98_RS12250 PF12833 Helix-turn-helix domain JCP98_RS12255 PF02743 Cache domain JCP98_RS12255 PF06580 Histidine kinase JCP98_RS12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS12255 PF00672 HAMP domain JCP98_RS12265 PF12010 Domain of unknown function (DUF3502) JCP98_RS12270 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS12280 PF01479 S4 domain JCP98_RS12280 PF00849 RNA pseudouridylate synthase JCP98_RS12285 PF14667 Polysaccharide biosynthesis C-terminal domain JCP98_RS12285 PF01943 Polysaccharide biosynthesis protein JCP98_RS12295 PF08245 Mur ligase middle domain JCP98_RS12295 PF02875 Mur ligase family, glutamate ligase domain JCP98_RS12300 PF02378 Phosphotransferase system, EIIC JCP98_RS12310 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCP98_RS12315 PF05043 Mga helix-turn-helix domain JCP98_RS12315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCP98_RS12315 PF08279 HTH domain JCP98_RS12315 PF00874 PRD domain JCP98_RS12320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCP98_RS12360 PF06445 GyrI-like small molecule binding domain JCP98_RS12360 PF13411 MerR HTH family regulatory protein JCP98_RS12365 PF00664 ABC transporter transmembrane region JCP98_RS12365 PF00005 ABC transporter JCP98_RS12370 PF00664 ABC transporter transmembrane region JCP98_RS12370 PF00005 ABC transporter JCP98_RS12380 PF13603 Leucyl-tRNA synthetase, Domain 2 JCP98_RS12380 PF00133 tRNA synthetases class I (I, L, M and V) JCP98_RS12380 PF08264 Anticodon-binding domain of tRNA JCP98_RS12380 PF09334 tRNA synthetases class I (M) JCP98_RS12385 PF01476 LysM domain JCP98_RS12385 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS12390 PF01569 PAP2 superfamily JCP98_RS12395 PF04055 Radical SAM superfamily JCP98_RS12395 PF16199 Radical_SAM C-terminal domain JCP98_RS12400 PF06962 Putative rRNA methylase JCP98_RS12410 PF00872 Transposase, Mutator family JCP98_RS12445 PF14659 Phage integrase, N-terminal SAM-like domain JCP98_RS12445 PF00589 Phage integrase family JCP98_RS12450 PF00872 Transposase, Mutator family JCP98_RS12465 PF00005 ABC transporter JCP98_RS12465 PF00664 ABC transporter transmembrane region JCP98_RS12470 PF00005 ABC transporter JCP98_RS12470 PF00664 ABC transporter transmembrane region JCP98_RS12475 PF02909 Tetracyclin repressor-like, C-terminal domain JCP98_RS12475 PF00440 Bacterial regulatory proteins, tetR family JCP98_RS12485 PF07690 Major Facilitator Superfamily JCP98_RS12490 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCP98_RS12490 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCP98_RS12490 PF02772 S-adenosylmethionine synthetase, central domain JCP98_RS12645 PF01336 OB-fold nucleic acid binding domain JCP98_RS12645 PF00152 tRNA synthetases class II (D, K and N) JCP98_RS12650 PF01207 Dihydrouridine synthase (Dus) JCP98_RS12655 PF01430 Hsp33 protein JCP98_RS12660 PF01434 Peptidase family M41 JCP98_RS12660 PF17862 AAA+ lid domain JCP98_RS12660 PF00004 ATPase family associated with various cellular activities (AAA) JCP98_RS12660 PF06480 FtsH Extracellular JCP98_RS12665 PF00156 Phosphoribosyl transferase domain JCP98_RS12670 PF01171 PP-loop family JCP98_RS12670 PF11734 TilS substrate C-terminal domain JCP98_RS12675 PF00575 S1 RNA binding domain JCP98_RS12685 PF01479 S4 domain JCP98_RS12690 PF14667 Polysaccharide biosynthesis C-terminal domain JCP98_RS12690 PF01943 Polysaccharide biosynthesis protein JCP98_RS12695 PF00270 DEAD/DEAH box helicase JCP98_RS12695 PF02559 CarD-like/TRCF domain JCP98_RS12695 PF00271 Helicase conserved C-terminal domain JCP98_RS12695 PF03461 TRCF domain JCP98_RS12695 PF17757 UvrB interaction domain JCP98_RS12700 PF01195 Peptidyl-tRNA hydrolase JCP98_RS12705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCP98_RS12705 PF00056 lactate/malate dehydrogenase, NAD binding domain JCP98_RS12715 PF01709 Transcriptional regulator JCP98_RS12730 PF00877 NlpC/P60 family JCP98_RS12740 PF04085 rod shape-determining protein MreC JCP98_RS12750 PF00834 Ribulose-phosphate 3 epimerase family JCP98_RS12755 PF03193 RsgA GTPase JCP98_RS12755 PF16745 RsgA N-terminal domain JCP98_RS12760 PF03793 PASTA domain JCP98_RS12760 PF00069 Protein kinase domain JCP98_RS12770 PF01189 16S rRNA methyltransferase RsmB/F JCP98_RS12770 PF01029 NusB family JCP98_RS12775 PF02911 Formyl transferase, C-terminal domain JCP98_RS12775 PF00551 Formyl transferase JCP98_RS12780 PF01327 Polypeptide deformylase JCP98_RS12785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCP98_RS12785 PF00271 Helicase conserved C-terminal domain JCP98_RS12785 PF17764 3′ DNA-binding domain (3′BD) JCP98_RS12785 PF18074 Primosomal protein N C-terminal domain JCP98_RS12785 PF04851 Type III restriction enzyme, res subunit JCP98_RS12790 PF01192 RNA polymerase Rpb6 JCP98_RS12795 PF00625 Guanylate kinase JCP98_RS12805 PF08340 Domain of unknown function (DUF1732) JCP98_RS12805 PF03755 YicC-like family, N-terminal region JCP98_RS12815 PF01734 Patatin-like phospholipase JCP98_RS12825 PF09515 Thiamine transporter protein (Thia_YuaJ) JCP98_RS12830 PF14572 Phosphoribosyl synthetase-associated domain JCP98_RS12830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCP98_RS12835 PF00132 Bacterial transferase hexapeptide (six repeats) JCP98_RS12835 PF00483 Nucleotidyl transferase JCP98_RS12840 PF00156 Phosphoribosyl transferase domain JCP98_RS12840 PF09182 Bacterial purine repressor, N-terminal JCP98_RS12845 PF00950 ABC 3 transport family JCP98_RS12850 PF00005 ABC transporter JCP98_RS12855 PF01297 Zinc-uptake complex component A periplasmic JCP98_RS12855 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP98_RS12860 PF00288 GHMP kinases N terminal domain JCP98_RS12860 PF08544 GHMP kinases C terminal JCP98_RS12865 PF03706 Lysylphosphatidylglycerol synthase TM region JCP98_RS12865 PF09924 Uncharacterised conserved protein (DUF2156) JCP98_RS12870 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCP98_RS12870 PF03807 NADP oxidoreductase coenzyme F420-dependent JCP98_RS12880 PF01966 HD domain JCP98_RS12880 PF00013 KH domain JCP98_RS12880 PF12072 Domain of unknown function (DUF3552) JCP98_RS12885 PF00154 recA bacterial DNA recombination protein JCP98_RS12890 PF02464 Competence-damaged protein JCP98_RS12890 PF18146 Damage-inducible protein CinA KH domain JCP98_RS12890 PF00994 Probable molybdopterin binding domain JCP98_RS12895 PF01066 CDP-alcohol phosphatidyltransferase JCP98_RS12900 PF13464 Domain of unknown function (DUF4115) JCP98_RS12905 PF05193 Peptidase M16 inactive domain JCP98_RS12905 PF00675 Insulinase (Peptidase family M16) JCP98_RS12910 PF05193 Peptidase M16 inactive domain JCP98_RS12915 PF01741 Large-conductance mechanosensitive channel, MscL JCP98_RS12920 PF13673 Acetyltransferase (GNAT) domain JCP98_RS12925 PF06257 Biofilm formation stimulator VEG JCP98_RS12935 PF05991 YacP-like NYN domain JCP98_RS12940 PF00588 SpoU rRNA Methylase family JCP98_RS12940 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCP98_RS12945 PF00636 Ribonuclease III domain JCP98_RS12950 PF09190 DALR domain JCP98_RS12950 PF01406 tRNA synthetases class I (C) catalytic domain JCP98_RS12955 PF06426 Serine acetyltransferase, N-terminal JCP98_RS12955 PF00132 Bacterial transferase hexapeptide (six repeats) JCP98_RS12960 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCP98_RS12970 PF18073 Rubredoxin metal binding domain JCP98_RS12975 PF00692 dUTPase JCP98_RS12985 PF00696 Amino acid kinase family JCP98_RS12990 PF00171 Aldehyde dehydrogenase family JCP98_RS13005 PF07690 Major Facilitator Superfamily JCP98_RS13020 PF00005 ABC transporter JCP98_RS13025 PF00881 Nitroreductase family JCP98_RS13035 PF01476 LysM domain JCP98_RS13035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS13040 PF00106 short chain dehydrogenase JCP98_RS13045 PF12464 Maltose acetyltransferase JCP98_RS13045 PF00132 Bacterial transferase hexapeptide (six repeats) JCP98_RS13045 PF14602 Hexapeptide repeat of succinyl-transferase JCP98_RS13050 PF03466 LysR substrate binding domain JCP98_RS13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCP98_RS13055 PF00874 PRD domain JCP98_RS13055 PF03123 CAT RNA binding domain JCP98_RS13060 PF00367 phosphotransferase system, EIIB JCP98_RS13060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS13060 PF02378 Phosphotransferase system, EIIC JCP98_RS13065 PF05368 NmrA-like family JCP98_RS13080 PF06445 GyrI-like small molecule binding domain JCP98_RS13080 PF12833 Helix-turn-helix domain JCP98_RS13085 PF00872 Transposase, Mutator family JCP98_RS13095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP98_RS13095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP98_RS13100 PF03591 AzlC protein JCP98_RS13110 PF00107 Zinc-binding dehydrogenase JCP98_RS13110 PF08240 Alcohol dehydrogenase GroES-like domain JCP98_RS13115 PF01207 Dihydrouridine synthase (Dus) JCP98_RS13120 PF01061 ABC-2 type transporter JCP98_RS13125 PF00005 ABC transporter JCP98_RS13130 PF05192 MutS domain III JCP98_RS13130 PF05188 MutS domain II JCP98_RS13130 PF05190 MutS family domain IV JCP98_RS13130 PF00488 MutS domain V JCP98_RS13130 PF01624 MutS domain I JCP98_RS13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS13135 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS13140 PF00072 Response regulator receiver domain JCP98_RS13140 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS13150 PF00005 ABC transporter JCP98_RS13180 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS13180 PF07702 UTRA domain JCP98_RS13185 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS13190 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS13195 PF03609 PTS system sorbose-specific iic component JCP98_RS13200 PF03830 PTS system sorbose subfamily IIB component JCP98_RS13205 PF03610 PTS system fructose IIA component JCP98_RS13210 PF01380 SIS domain JCP98_RS13260 PF03432 Relaxase/Mobilisation nuclease domain JCP98_RS13345 PF18106 Rolling Circle replication initiation protein N-terminal domain JCP98_RS13345 PF02486 Replication initiation factor JCP98_RS13355 PF01348 Type II intron maturase JCP98_RS13355 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP98_RS13385 PF00877 NlpC/P60 family JCP98_RS13410 PF07690 Major Facilitator Superfamily JCP98_RS13420 PF05257 CHAP domain JCP98_RS13420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCP98_RS13425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS13425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS13430 PF00746 LPXTG cell wall anchor motif JCP98_RS13430 PF04650 YSIRK type signal peptide JCP98_RS13430 PF17480 AlphaC C-terminal JCP98_RS13430 PF08829 Alpha C protein N terminal JCP98_RS13440 PF12833 Helix-turn-helix domain JCP98_RS13475 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCP98_RS13475 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCP98_RS13495 PF01297 Zinc-uptake complex component A periplasmic JCP98_RS13495 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCP98_RS13505 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCP98_RS13505 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCP98_RS13510 PF00471 Ribosomal protein L33 JCP98_RS13520 PF01783 Ribosomal L32p protein family JCP98_RS13525 PF00253 Ribosomal protein S14p/S29e JCP98_RS13530 PF00664 ABC transporter transmembrane region JCP98_RS13530 PF00005 ABC transporter JCP98_RS13535 PF00664 ABC transporter transmembrane region JCP98_RS13535 PF00005 ABC transporter JCP98_RS13545 PF00005 ABC transporter JCP98_RS13555 PF00440 Bacterial regulatory proteins, tetR family JCP98_RS13565 PF01297 Zinc-uptake complex component A periplasmic JCP98_RS13570 PF00950 ABC 3 transport family JCP98_RS13580 PF00005 ABC transporter JCP98_RS13590 PF00589 Phage integrase family JCP98_RS13590 PF02899 Phage integrase, N-terminal SAM-like domain JCP98_RS13595 PF00380 Ribosomal protein S9/S16 JCP98_RS13600 PF00572 Ribosomal protein L13 JCP98_RS13605 PF00210 Ferritin-like domain JCP98_RS13610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCP98_RS13610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCP98_RS13615 PF01478 Type IV leader peptidase family JCP98_RS13615 PF06750 Bacterial Peptidase A24 N-terminal domain JCP98_RS13620 PF01625 Peptide methionine sulfoxide reductase JCP98_RS13625 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS13630 PF02595 Glycerate kinase family JCP98_RS13635 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCP98_RS13635 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCP98_RS13635 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCP98_RS13640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCP98_RS13640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCP98_RS13645 PF01261 Xylose isomerase-like TIM barrel JCP98_RS13650 PF00107 Zinc-binding dehydrogenase JCP98_RS13655 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS13660 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS13665 PF01547 Bacterial extracellular solute-binding protein JCP98_RS13670 PF00128 Alpha amylase, catalytic domain JCP98_RS13675 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS13675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCP98_RS13680 PF00623 RNA polymerase Rpb1, domain 2 JCP98_RS13680 PF04998 RNA polymerase Rpb1, domain 5 JCP98_RS13680 PF04997 RNA polymerase Rpb1, domain 1 JCP98_RS13680 PF05000 RNA polymerase Rpb1, domain 4 JCP98_RS13680 PF04983 RNA polymerase Rpb1, domain 3 JCP98_RS13685 PF04560 RNA polymerase Rpb2, domain 7 JCP98_RS13685 PF00562 RNA polymerase Rpb2, domain 6 JCP98_RS13685 PF04563 RNA polymerase beta subunit JCP98_RS13685 PF04561 RNA polymerase Rpb2, domain 2 JCP98_RS13685 PF04565 RNA polymerase Rpb2, domain 3 JCP98_RS13685 PF10385 RNA polymerase beta subunit external 1 domain JCP98_RS13695 PF02653 Branched-chain amino acid transport system / permease component JCP98_RS13700 PF00005 ABC transporter JCP98_RS13705 PF03099 Biotin/lipoate A/B protein ligase family JCP98_RS13705 PF08279 HTH domain JCP98_RS13705 PF02237 Biotin protein ligase C terminal domain JCP98_RS13720 PF00348 Polyprenyl synthetase JCP98_RS13740 PF04205 FMN-binding domain JCP98_RS13745 PF02424 ApbE family JCP98_RS13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCP98_RS13755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP98_RS13760 PF01136 Peptidase family U32 JCP98_RS13760 PF16325 Peptidase family U32 C-terminal domain JCP98_RS13765 PF01136 Peptidase family U32 JCP98_RS13770 PF02861 Clp amino terminal domain, pathogenicity island component JCP98_RS13770 PF00004 ATPase family associated with various cellular activities (AAA) JCP98_RS13770 PF10431 C-terminal, D2-small domain, of ClpB protein JCP98_RS13770 PF07724 AAA domain (Cdc48 subfamily) JCP98_RS13770 PF17871 AAA lid domain JCP98_RS13775 PF17727 CtsR C-terminal dimerization domain JCP98_RS13775 PF05848 CtsR N-terminal HTH domain JCP98_RS13840 PF00072 Response regulator receiver domain JCP98_RS13840 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS13845 PF00672 HAMP domain JCP98_RS13845 PF13426 PAS domain JCP98_RS13845 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS13850 PF02403 Seryl-tRNA synthetase N-terminal domain JCP98_RS13850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCP98_RS13855 PF00478 IMP dehydrogenase / GMP reductase domain JCP98_RS13855 PF00571 CBS domain JCP98_RS13865 PF01926 50S ribosome-binding GTPase JCP98_RS13865 PF06071 Protein of unknown function (DUF933) JCP98_RS13870 PF06107 Bacterial protein of unknown function (DUF951) JCP98_RS13875 PF17762 HTH domain found in ParB protein JCP98_RS13875 PF02195 ParB-like nuclease domain JCP98_RS13880 PF13614 AAA domain JCP98_RS13885 PF02527 rRNA small subunit methyltransferase G JCP98_RS13890 PF13932 GidA associated domain JCP98_RS13890 PF01134 Glucose inhibited division protein A JCP98_RS13895 PF01926 50S ribosome-binding GTPase JCP98_RS13895 PF10396 GTP-binding protein TrmE N-terminus JCP98_RS13895 PF12631 MnmE helical domain JCP98_RS13905 PF14804 Jag N-terminus JCP98_RS13905 PF01424 R3H domain JCP98_RS13910 PF02096 60Kd inner membrane protein JCP98_RS13915 PF00825 Ribonuclease P JCP98_RS13920 PF00468 Ribosomal protein L34 JCP98_RS13935 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCP98_RS13990 PF18840 Large polyvalent protein associated domain 25 JCP98_RS13995 PF13154 Protein of unknown function (DUF3991) JCP98_RS14000 PF01131 DNA topoisomerase JCP98_RS14000 PF01751 Toprim domain JCP98_RS14020 PF00436 Single-strand binding protein family JCP98_RS14025 PF00436 Single-strand binding protein family JCP98_RS14080 PF09221 Bacteriocin class IId cyclical uberolysin-like JCP98_RS14085 PF00872 Transposase, Mutator family JCP98_RS14100 PF03611 PTS system sugar-specific permease component JCP98_RS14115 PF00834 Ribulose-phosphate 3 epimerase family JCP98_RS14125 PF13005 zinc-finger binding domain of transposase IS66 JCP98_RS14125 PF03050 Transposase IS66 family JCP98_RS14125 PF13007 Transposase C of IS166 homeodomain JCP98_RS14125 PF13817 IS66 C-terminal element JCP98_RS14160 PF00480 ROK family JCP98_RS14165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS14165 PF00367 phosphotransferase system, EIIB JCP98_RS14165 PF02378 Phosphotransferase system, EIIC JCP98_RS14170 PF08244 Glycosyl hydrolases family 32 C terminal JCP98_RS14170 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCP98_RS14175 PF00356 Bacterial regulatory proteins, lacI family JCP98_RS14185 PF01797 Transposase IS200 like JCP98_RS14195 PF02796 Helix-turn-helix domain of resolvase JCP98_RS14195 PF00239 Resolvase, N terminal domain JCP98_RS14200 PF01418 Helix-turn-helix domain, rpiR family JCP98_RS14200 PF01380 SIS domain JCP98_RS14205 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCP98_RS14210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS14210 PF00367 phosphotransferase system, EIIB JCP98_RS14210 PF02378 Phosphotransferase system, EIIC JCP98_RS14215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS14215 PF00367 phosphotransferase system, EIIB JCP98_RS14215 PF02378 Phosphotransferase system, EIIC JCP98_RS14220 PF01610 Transposase JCP98_RS14220 PF13683 Integrase core domain JCP98_RS14235 PF00589 Phage integrase family JCP98_RS14235 PF13495 Phage integrase, N-terminal SAM-like domain JCP98_RS14245 PF02378 Phosphotransferase system, EIIC JCP98_RS14255 PF01791 DeoC/LacD family aldolase JCP98_RS14260 PF01380 SIS domain JCP98_RS14265 PF07702 UTRA domain JCP98_RS14265 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS14280 PF00872 Transposase, Mutator family JCP98_RS14285 PF13683 Integrase core domain JCP98_RS14285 PF01610 Transposase JCP98_RS14295 PF00872 Transposase, Mutator family JCP98_RS14300 PF00872 Transposase, Mutator family JCP98_RS14340 PF13610 DDE domain JCP98_RS14345 PF02796 Helix-turn-helix domain of resolvase JCP98_RS14345 PF00239 Resolvase, N terminal domain JCP98_RS14355 PF12826 Helix-hairpin-helix motif JCP98_RS14355 PF00533 BRCA1 C Terminus (BRCT) domain JCP98_RS14355 PF03120 NAD-dependent DNA ligase OB-fold domain JCP98_RS14355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCP98_RS14355 PF01653 NAD-dependent DNA ligase adenylation domain JCP98_RS14360 PF00239 Resolvase, N terminal domain JCP98_RS14360 PF02796 Helix-turn-helix domain of resolvase JCP98_RS14370 PF08924 Domain of unknown function (DUF1906) JCP98_RS14370 PF01471 Putative peptidoglycan binding domain JCP98_RS14385 PF13610 DDE domain JCP98_RS14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS14390 PF00672 HAMP domain JCP98_RS14390 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS14395 PF00072 Response regulator receiver domain JCP98_RS14395 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS14405 PF00266 Aminotransferase class-V JCP98_RS14420 PF08402 TOBE domain JCP98_RS14420 PF00005 ABC transporter JCP98_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component JCP98_RS14445 PF02811 PHP domain JCP98_RS14465 PF04055 Radical SAM superfamily JCP98_RS14480 PF00005 ABC transporter JCP98_RS14500 PF08534 Redoxin JCP98_RS14535 PF00589 Phage integrase family JCP98_RS14545 PF13673 Acetyltransferase (GNAT) domain JCP98_RS14555 PF13610 DDE domain JCP98_RS14560 PF00403 Heavy-metal-associated domain JCP98_RS14570 PF01022 Bacterial regulatory protein, arsR family JCP98_RS14575 PF00403 Heavy-metal-associated domain JCP98_RS14580 PF00403 Heavy-metal-associated domain JCP98_RS14585 PF01790 Prolipoprotein diacylglyceryl transferase JCP98_RS14595 PF00027 Cyclic nucleotide-binding domain JCP98_RS14595 PF13545 Crp-like helix-turn-helix domain JCP98_RS14600 PF13683 Integrase core domain JCP98_RS14600 PF01610 Transposase JCP98_RS14605 PF03123 CAT RNA binding domain JCP98_RS14605 PF00874 PRD domain JCP98_RS14610 PF00232 Glycosyl hydrolase family 1 JCP98_RS14615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCP98_RS14615 PF00367 phosphotransferase system, EIIB JCP98_RS14615 PF02378 Phosphotransferase system, EIIC JCP98_RS14620 PF00158 Sigma-54 interaction domain JCP98_RS14620 PF00874 PRD domain JCP98_RS14620 PF03610 PTS system fructose IIA component JCP98_RS14665 PF03606 C4-dicarboxylate anaerobic carrier JCP98_RS14675 PF00872 Transposase, Mutator family JCP98_RS14685 PF00392 Bacterial regulatory proteins, gntR family JCP98_RS14685 PF07702 UTRA domain JCP98_RS14690 PF00294 pfkB family carbohydrate kinase JCP98_RS14695 PF01380 SIS domain JCP98_RS14700 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCP98_RS14700 PF18766 SWI2/SNF2 ATPase JCP98_RS14700 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCP98_RS14710 PF13683 Integrase core domain JCP98_RS14710 PF01610 Transposase JCP98_RS14720 PF08270 M protein trans-acting positive regulator (MGA) PRD domain JCP98_RS14720 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JCP98_RS14720 PF05043 Mga helix-turn-helix domain JCP98_RS14725 PF13419 Haloacid dehalogenase-like hydrolase JCP98_RS14730 PF03610 PTS system fructose IIA component JCP98_RS14730 PF00874 PRD domain JCP98_RS14730 PF00158 Sigma-54 interaction domain JCP98_RS14735 PF01380 SIS domain JCP98_RS14740 PF03613 PTS system mannose/fructose/sorbose family IID component JCP98_RS14745 PF03609 PTS system sorbose-specific iic component JCP98_RS14750 PF03830 PTS system sorbose subfamily IIB component JCP98_RS14810 PF17400 Family of unknown function (DUF5406) JCP98_RS14835 PF04203 Sortase domain JCP98_RS14875 PF12696 TraM recognition site of TraD and TraG JCP98_RS14900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP98_RS14905 PF18008 Replication initiator protein A C-terminal domain JCP98_RS14905 PF06970 Replication initiator protein A (RepA) N-terminus JCP98_RS14910 PF13610 DDE domain JCP98_RS14915 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) JCP98_RS14920 PF00398 Ribosomal RNA adenine dimethylase JCP98_RS14945 PF08241 Methyltransferase domain JCP98_RS14955 PF00583 Acetyltransferase (GNAT) family JCP98_RS14960 PF01636 Phosphotransferase enzyme family JCP98_RS14965 PF13683 Integrase core domain JCP98_RS14965 PF01610 Transposase JCP98_RS14970 PF08279 HTH domain JCP98_RS14970 PF13280 WYL domain JCP98_RS14975 PF13610 DDE domain JCP98_RS15005 PF13610 DDE domain JCP98_RS15015 PF00072 Response regulator receiver domain JCP98_RS15015 PF00486 Transcriptional regulatory protein, C terminal JCP98_RS15020 PF00512 His Kinase A (phospho-acceptor) domain JCP98_RS15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCP98_RS15025 PF13683 Integrase core domain JCP98_RS15025 PF01610 Transposase JCP98_RS15030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP98_RS15030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCP98_RS15035 PF07478 D-ala D-ala ligase C-terminus JCP98_RS15035 PF01820 D-ala D-ala ligase N-terminus JCP98_RS15040 PF01427 D-ala-D-ala dipeptidase JCP98_RS15045 PF02557 D-alanyl-D-alanine carboxypeptidase JCP98_RS15050 PF04892 VanZ like family JCP98_RS15055 PF01022 Bacterial regulatory protein, arsR family JCP98_RS15070 PF00239 Resolvase, N terminal domain JCP98_RS15070 PF02796 Helix-turn-helix domain of resolvase JCP98_RS15075 PF00665 Integrase core domain JCP98_RS15075 PF13936 Helix-turn-helix domain JCP98_RS15090 PF13610 DDE domain JCP98_RS15095 PF13610 DDE domain JCP98_RS15115 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JCP98_RS15125 PF00239 Resolvase, N terminal domain JCP98_RS15125 PF02796 Helix-turn-helix domain of resolvase JCP98_RS15130 PF11798 IMS family HHH motif JCP98_RS15130 PF11799 impB/mucB/samB family C-terminal domain JCP98_RS15130 PF00817 impB/mucB/samB family JCP98_RS15150 PF13614 AAA domain JCP98_RS15210 PF01548 Transposase JCP98_RS15215 PF18840 Large polyvalent protein associated domain 25 JCP98_RS15220 PF13154 Protein of unknown function (DUF3991) JCP98_RS15225 PF01751 Toprim domain JCP98_RS15225 PF01131 DNA topoisomerase JCP98_RS15245 PF00436 Single-strand binding protein family JCP98_RS15290 PF02661 Fic/DOC family JCP98_RS15295 PF02796 Helix-turn-helix domain of resolvase JCP98_RS15295 PF00239 Resolvase, N terminal domain JCP98_RS15305 PF11798 IMS family HHH motif JCP98_RS15305 PF00817 impB/mucB/samB family JCP98_RS15305 PF11799 impB/mucB/samB family C-terminal domain JCP98_RS15325 PF13614 AAA domain JCP98_RS15340 PF01610 Transposase JCP98_RS15340 PF13683 Integrase core domain JCP98_RS15350 PF17400 Family of unknown function (DUF5406) JCP98_RS15385 PF04203 Sortase domain JCP98_RS15425 PF12696 TraM recognition site of TraD and TraG JCP98_RS15450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCP98_RS15505 PF03432 Relaxase/Mobilisation nuclease domain