locus-tag	class	description
JCP98_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JCP98_RS00010	COG0592	DNA-directed DNA polymerase activity
JCP98_RS00015	COG2501	S4 domain
JCP98_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JCP98_RS00025	COG0187	DNA topoisomerase II activity
JCP98_RS00035	COG0360	Binds together with S18 to 16S ribosomal RNA
JCP98_RS00040	COG0629	single-stranded DNA binding
JCP98_RS00045	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JCP98_RS00055	COG0359	binds to the 23S rRNA
JCP98_RS00060	COG0305	Participates in initiation and elongation during chromosome replication
JCP98_RS00065	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JCP98_RS00075	COG0488	(ABC) transporter
JCP98_RS00085	COG0028	Belongs to the TPP enzyme family
JCP98_RS00130	COG3328	transposase activity
JCP98_RS00160	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS00170	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS00170	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS00180	COG3328	transposase activity
JCP98_RS00210	COG1674	ftsk spoiiie
JCP98_RS00215	COG2946	Replication initiation factor
JCP98_RS00260	COG0741	lytic transglycosylase activity
JCP98_RS00260	COG0791	NLP P60 protein
JCP98_RS00305	COG0582	viral genome integration into host DNA
JCP98_RS00310	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JCP98_RS00310	COG0519	Catalyzes the synthesis of GMP from XMP
JCP98_RS00315	COG1072	(Pantothenic acid kinase))
JCP98_RS00320	COG2813	Specifically methylates the guanine in position
JCP98_RS00325	COG1609	Transcriptional regulator
JCP98_RS00330	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JCP98_RS00335	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JCP98_RS00340	COG0295	cytidine deaminase activity
JCP98_RS00345	COG1744	ABC transporter substrate-binding protein PnrA-like
JCP98_RS00350	COG3845	ABC transporter
JCP98_RS00355	COG4603	Belongs to the binding-protein-dependent transport system permease family
JCP98_RS00360	COG1079	Belongs to the binding-protein-dependent transport system permease family
JCP98_RS00365	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JCP98_RS00375	COG0813	purine-nucleoside phosphorylase activity
JCP98_RS00380	COG0588	phosphoglycerate mutase activity
JCP98_RS00390	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JCP98_RS00395	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JCP98_RS00400	COG0049	tRNA binding
JCP98_RS00405	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JCP98_RS00410	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JCP98_RS00415	COG0051	transcription antitermination factor activity, RNA binding
JCP98_RS00420	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JCP98_RS00425	COG0088	Forms part of the polypeptide exit tunnel
JCP98_RS00430	COG0089	rRNA binding
JCP98_RS00435	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JCP98_RS00445	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JCP98_RS00450	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JCP98_RS00455	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JCP98_RS00460	COG0255	Belongs to the universal ribosomal protein uL29 family
JCP98_RS00465	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JCP98_RS00470	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JCP98_RS00475	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JCP98_RS00480	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JCP98_RS00485	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JCP98_RS00490	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JCP98_RS00495	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JCP98_RS00500	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JCP98_RS00505	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JCP98_RS00510	COG1841	ribosomal large subunit assembly
JCP98_RS00515	COG0200	Binds to the 23S rRNA
JCP98_RS00520	COG0201	protein transport
JCP98_RS00525	COG0563	adenylate kinase activity
JCP98_RS00530	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JCP98_RS00535	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JCP98_RS00540	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JCP98_RS00545	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JCP98_RS00550	COG0202	RNA polymerase activity
JCP98_RS00555	COG0203	ribosomal protein L17
JCP98_RS00560	COG1122	ATPase activity
JCP98_RS00565	COG1122	ATPase activity
JCP98_RS00575	COG0101	tRNA pseudouridine synthase activity
JCP98_RS00585	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JCP98_RS00595	COG1461	Dihydroxyacetone kinase
JCP98_RS00600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JCP98_RS00605	COG0416	fatty acid biosynthetic process
JCP98_RS00610	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JCP98_RS00620	COG4608	Belongs to the ABC transporter superfamily
JCP98_RS00625	COG0601	transmembrane transport
JCP98_RS00640	COG0571	ribonuclease III activity
JCP98_RS00645	COG1196	nuclear chromosome segregation
JCP98_RS00650	COG0561	phosphatase activity
JCP98_RS00655	COG0552	protein localization to endoplasmic reticulum
JCP98_RS00660	COG2918	glutathione biosynthetic process
JCP98_RS00660	COG1181	Belongs to the D-alanine--D-alanine ligase family
JCP98_RS00670	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCP98_RS00675	COG4605	iron ion homeostasis
JCP98_RS00680	COG4604	ABC transporter, ATP-binding protein
JCP98_RS00685	COG4607	ABC-type enterochelin transport system periplasmic component
JCP98_RS00710	COG4886	Leucine-rich repeat (LRR) protein
JCP98_RS00710	COG4932	domain protein
JCP98_RS00725	COG3328	transposase activity
JCP98_RS00745	COG1380	Effector of murein hydrolase LrgA
JCP98_RS00750	COG1346	cytolysis
JCP98_RS00775	COG1028	Short-chain dehydrogenase reductase Sdr
JCP98_RS00785	COG1268	BioY protein
JCP98_RS00790	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JCP98_RS00805	COG0561	phosphatase activity
JCP98_RS00810	COG1692	metallophosphoesterase
JCP98_RS00820	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JCP98_RS00830	COG0424	maF-like protein
JCP98_RS00835	COG1263	PTS System
JCP98_RS00835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS00840	COG2188	Transcriptional regulator
JCP98_RS00850	COG0632	four-way junction helicase activity
JCP98_RS00855	COG2255	four-way junction helicase activity
JCP98_RS00865	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JCP98_RS00875	COG3328	transposase activity
JCP98_RS00880	COG1114	Component of the transport system for branched-chain amino acids
JCP98_RS00890	COG1113	amino acid transport
JCP98_RS00895	COG1126	abc transporter atp-binding protein
JCP98_RS00900	COG0765	amino acid transport
JCP98_RS00910	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JCP98_RS00915	COG0110	maltose O-acetyltransferase activity
JCP98_RS00920	COG1827	regulation of RNA biosynthetic process
JCP98_RS00925	COG0242	peptide deformylase activity
JCP98_RS00930	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JCP98_RS00935	COG1185	polyribonucleotide nucleotidyltransferase activity
JCP98_RS00945	COG3158	transport of potassium into the cell
JCP98_RS00950	COG1253	flavin adenine dinucleotide binding
JCP98_RS00955	COG0534	Mate efflux family protein
JCP98_RS00965	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JCP98_RS00970	COG1187	pseudouridine synthase activity
JCP98_RS00975	COG1011	Hydrolase
JCP98_RS00980	COG0572	uridine kinase
JCP98_RS01005	COG1671	Belongs to the UPF0178 family
JCP98_RS01015	COG1181	Belongs to the D-alanine--D-alanine ligase family
JCP98_RS01020	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JCP98_RS01030	COG0736	holo-[acyl-carrier-protein] synthase activity
JCP98_RS01035	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JCP98_RS01040	COG2337	Toxic component of a toxin-antitoxin (TA) module
JCP98_RS01045	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JCP98_RS01050	COG3321	synthase
JCP98_RS01050	COG0604	alcohol dehydrogenase
JCP98_RS01060	COG0531	amino acid
JCP98_RS01085	COG1174	glycine betaine transport
JCP98_RS01105	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JCP98_RS01125	COG0343	queuine tRNA-ribosyltransferase activity
JCP98_RS01130	COG1862	Preprotein translocase
JCP98_RS01135	COG1012	belongs to the aldehyde dehydrogenase family
JCP98_RS01135	COG1454	alcohol dehydrogenase
JCP98_RS01145	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JCP98_RS01175	COG1917	Cupin 2, conserved barrel domain protein
JCP98_RS01175	COG2207	Transcriptional regulator
JCP98_RS01180	COG1070	Carbohydrate kinase
JCP98_RS01185	COG4806	L-rhamnose isomerase
JCP98_RS01190	COG0235	Class ii aldolase
JCP98_RS01195	COG3254	rhamnose metabolic process
JCP98_RS01200	COG1454	alcohol dehydrogenase
JCP98_RS01205	COG1414	Transcriptional regulator
JCP98_RS01210	COG0800	Aldolase
JCP98_RS01220	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JCP98_RS01225	COG1028	Short-chain dehydrogenase reductase Sdr
JCP98_RS01230	COG1304	FMN binding
JCP98_RS01245	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JCP98_RS01250	COG1428	Deoxynucleoside kinase
JCP98_RS01270	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JCP98_RS01275	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JCP98_RS01280	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JCP98_RS01310	COG0824	Thioesterase
JCP98_RS01315	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JCP98_RS01335	COG1363	Peptidase, m42
JCP98_RS01340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JCP98_RS01345	COG0589	response to stress
JCP98_RS01350	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCP98_RS01355	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JCP98_RS01360	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JCP98_RS01365	COG4807	Protein conserved in bacteria
JCP98_RS01375	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JCP98_RS01390	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JCP98_RS01450	COG1368	sulfuric ester hydrolase activity
JCP98_RS01460	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JCP98_RS01470	COG0101	tRNA pseudouridine synthase activity
JCP98_RS01485	COG3328	transposase activity
JCP98_RS01505	COG0667	Aldo Keto reductase
JCP98_RS01510	COG2186	Transcriptional regulator
JCP98_RS01515	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS01520	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS01530	COG1447	Phosphotransferase system cellobiose-specific component IIA
JCP98_RS01550	COG1063	alcohol dehydrogenase
JCP98_RS01565	COG4716	Myosin-crossreactive antigen
JCP98_RS01605	COG1113	amino acid transport
JCP98_RS01630	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JCP98_RS01640	COG3052	prosthetic group binding
JCP98_RS01700	COG1051	belongs to the nudix hydrolase family
JCP98_RS01705	COG1846	Transcriptional regulator
JCP98_RS01730	COG2252	PERMEase
JCP98_RS01735	COG0366	Alpha amylase catalytic
JCP98_RS01740	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS01750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS01750	COG1263	PTS System
JCP98_RS01750	COG2190	(PTS) system
JCP98_RS01755	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS01765	COG1902	pentaerythritol trinitrate reductase activity
JCP98_RS01775	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS01785	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JCP98_RS01790	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JCP98_RS01795	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JCP98_RS01805	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JCP98_RS01815	COG1937	Protein conserved in bacteria
JCP98_RS01820	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JCP98_RS01825	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS01830	COG3973	AAA domain
JCP98_RS01855	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
JCP98_RS01860	COG2376	Dihydroxyacetone kinase
JCP98_RS01865	COG1461	Dihydroxyacetone kinase
JCP98_RS01875	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JCP98_RS01885	COG1131	(ABC) transporter
JCP98_RS01890	COG1309	transcriptional regulator
JCP98_RS01910	COG0531	amino acid
JCP98_RS01920	COG1609	Transcriptional regulator
JCP98_RS01930	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS01940	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS01940	COG1263	PTS System
JCP98_RS01940	COG2190	(PTS) system
JCP98_RS01965	COG3479	Phenolic acid decarboxylase
JCP98_RS01970	COG1695	Transcriptional regulator
JCP98_RS01980	COG2814	Major facilitator Superfamily
JCP98_RS02000	COG0163	prenyltransferase activity
JCP98_RS02005	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JCP98_RS02015	COG0577	efflux transmembrane transporter activity
JCP98_RS02015	COG1136	(ABC) transporter
JCP98_RS02035	COG1811	Na channel or pump
JCP98_RS02070	COG1136	(ABC) transporter
JCP98_RS02085	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS02085	COG3942	CHAP domain
JCP98_RS02090	COG2190	(PTS) system
JCP98_RS02090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS02090	COG1263	PTS System
JCP98_RS02095	COG1869	D-ribose catabolic process
JCP98_RS02105	COG1609	Transcriptional regulator
JCP98_RS02125	COG0366	Alpha amylase catalytic
JCP98_RS02130	COG0628	permease
JCP98_RS02135	COG3443	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS02135	COG0803	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS02160	COG1428	Deoxynucleoside kinase
JCP98_RS02170	COG0210	DNA helicase
JCP98_RS02180	COG1393	Belongs to the ArsC family
JCP98_RS02185	COG1393	Belongs to the ArsC family
JCP98_RS02190	COG2801	Transposase and inactivated derivatives
JCP98_RS02195	COG2963	transposase activity
JCP98_RS02215	COG0386	Belongs to the glutathione peroxidase family
JCP98_RS02220	COG1854	S-ribosylhomocysteine lyase activity
JCP98_RS02225	COG0626	cystathionine gamma-synthase activity
JCP98_RS02235	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JCP98_RS02240	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JCP98_RS02250	COG0019	diaminopimelate decarboxylase activity
JCP98_RS02255	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JCP98_RS02265	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JCP98_RS02270	COG2171	N-acyltransferase activity
JCP98_RS02275	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JCP98_RS02280	COG0527	aspartate kinase activity
JCP98_RS02285	COG1473	amidohydrolase
JCP98_RS02290	COG0436	Aminotransferase
JCP98_RS02295	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS02315	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JCP98_RS02320	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JCP98_RS02335	COG2207	Transcriptional regulator
JCP98_RS02340	COG2249	NAD(P)H dehydrogenase (quinone) activity
JCP98_RS02355	COG1113	amino acid transport
JCP98_RS02360	COG1121	(ABC) transporter
JCP98_RS02365	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JCP98_RS02380	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JCP98_RS02385	COG2823	Periplasmic or secreted lipoprotein
JCP98_RS02385	COG1652	LysM domain
JCP98_RS02395	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JCP98_RS02400	COG0477	Major facilitator Superfamily
JCP98_RS02410	COG1438	arginine binding
JCP98_RS02425	COG1764	response to oxidative stress
JCP98_RS02430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCP98_RS02435	COG1335	isochorismatase
JCP98_RS02450	COG2135	peptidase activity
JCP98_RS02490	COG3546	catalase activity
JCP98_RS02500	COG1175	transmembrane transport
JCP98_RS02505	COG0395	ABC-type sugar transport system, permease component
JCP98_RS02545	COG0745	RESPONSE REGULATOR receiver
JCP98_RS02550	COG2205	protein histidine kinase activity
JCP98_RS02555	COG4975	Glucose uptake
JCP98_RS02560	COG0531	amino acid
JCP98_RS02565	COG3853	Toxic anion resistance protein (TelA)
JCP98_RS02585	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JCP98_RS02590	COG1335	isochorismatase
JCP98_RS02600	COG3590	peptidase
JCP98_RS02610	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JCP98_RS02615	COG1104	cysteine desulfurase activity
JCP98_RS02635	COG0482	sulfurtransferase activity
JCP98_RS02645	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JCP98_RS02650	COG2814	Major facilitator Superfamily
JCP98_RS02670	COG0463	Glycosyl transferase, family 2
JCP98_RS02675	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JCP98_RS02680	COG2855	membrane
JCP98_RS02690	COG0583	DNA-binding transcription factor activity
JCP98_RS02695	COG0772	Belongs to the SEDS family
JCP98_RS02700	COG1393	Belongs to the ArsC family
JCP98_RS02705	COG0509	glycine decarboxylation via glycine cleavage system
JCP98_RS02710	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JCP98_RS02715	COG2011	ABC-type metal ion transport system permease component
JCP98_RS02720	COG1464	Belongs to the NlpA lipoprotein family
JCP98_RS02730	COG0719	Fe-S assembly protein
JCP98_RS02735	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JCP98_RS02745	COG0719	Fe-S assembly protein
JCP98_RS02825	COG0577	efflux transmembrane transporter activity
JCP98_RS02825	COG1136	(ABC) transporter
JCP98_RS02835	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JCP98_RS02845	COG1597	lipid kinase activity
JCP98_RS02880	COG1733	regulation of RNA biosynthetic process
JCP98_RS02895	COG3764	Sortase (surface protein transpeptidase)
JCP98_RS02900	COG3711	transcriptional antiterminator
JCP98_RS02905	COG2190	(PTS) system
JCP98_RS02905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS02905	COG1263	PTS System
JCP98_RS02910	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS02915	COG2188	Transcriptional regulator
JCP98_RS02925	COG1611	Belongs to the LOG family
JCP98_RS02935	COG1428	Deoxynucleoside kinase
JCP98_RS02955	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS02965	COG1368	sulfuric ester hydrolase activity
JCP98_RS02975	COG0105	UTP biosynthetic process
JCP98_RS02980	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JCP98_RS02985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS02990	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JCP98_RS02995	COG2011	ABC-type metal ion transport system permease component
JCP98_RS03000	COG1464	Belongs to the NlpA lipoprotein family
JCP98_RS03010	COG1757	Na H antiporter
JCP98_RS03025	COG1113	amino acid transport
JCP98_RS03035	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JCP98_RS03040	COG1929	Belongs to the glycerate kinase type-1 family
JCP98_RS03045	COG0488	(ABC) transporter
JCP98_RS03060	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JCP98_RS03065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS03065	COG1263	PTS System
JCP98_RS03080	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JCP98_RS03085	COG1131	(ABC) transporter
JCP98_RS03105	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JCP98_RS03120	COG0346	lactoylglutathione lyase activity
JCP98_RS03145	COG0561	phosphatase activity
JCP98_RS03150	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JCP98_RS03155	COG0280	phosphate acetyltransferase
JCP98_RS03160	COG0802	atpase or kinase
JCP98_RS03165	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JCP98_RS03175	COG0708	Exodeoxyribonuclease III
JCP98_RS03185	COG0812	UDP-N-acetylmuramate dehydrogenase activity
JCP98_RS03210	COG1053	succinate dehydrogenase
JCP98_RS03220	COG0702	epimerase
JCP98_RS03225	COG4684	Psort location CytoplasmicMembrane, score
JCP98_RS03230	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JCP98_RS03235	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JCP98_RS03240	COG0604	alcohol dehydrogenase
JCP98_RS03250	COG3842	ATPase activity
JCP98_RS03255	COG1176	ABC-type spermidine putrescine transport system, permease component I
JCP98_RS03260	COG1177	transmembrane transport
JCP98_RS03265	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JCP98_RS03270	COG3829	transcription factor binding
JCP98_RS03285	COG3715	PTS system
JCP98_RS03290	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS03305	COG1940	carbohydrate kinase activity
JCP98_RS03335	COG0582	viral genome integration into host DNA
JCP98_RS03340	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCP98_RS03350	COG0789	Transcriptional regulator
JCP98_RS03360	COG0504	CTP synthase activity
JCP98_RS03370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JCP98_RS03375	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JCP98_RS03380	COG0254	rRNA binding
JCP98_RS03400	COG1349	DNA-binding transcription factor activity
JCP98_RS03410	COG2814	Major facilitator Superfamily
JCP98_RS03420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JCP98_RS03440	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JCP98_RS03445	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JCP98_RS03450	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JCP98_RS03455	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JCP98_RS03460	COG3870	Protein conserved in bacteria
JCP98_RS03465	COG0470	DNA polymerase III
JCP98_RS03470	COG1774	PSP1 C-terminal conserved region
JCP98_RS03475	COG4467	Involved in initiation control of chromosome replication
JCP98_RS03490	COG0602	queuosine metabolic process
JCP98_RS03495	COG1328	CTP reductase activity
JCP98_RS03500	COG1136	(ABC) transporter
JCP98_RS03505	COG0577	efflux transmembrane transporter activity
JCP98_RS03515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JCP98_RS03520	COG1696	Membrane protein involved in D-alanine export
JCP98_RS03525	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JCP98_RS03530	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JCP98_RS03535	COG1363	Peptidase, m42
JCP98_RS03545	COG1234	tRNA 3'-trailer cleavage
JCP98_RS03550	COG0095	Lipoate-protein ligase
JCP98_RS03560	COG3328	transposase activity
JCP98_RS03580	COG3759	membrane
JCP98_RS03585	COG0659	secondary active sulfate transmembrane transporter activity
JCP98_RS03595	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JCP98_RS03605	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JCP98_RS03615	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCP98_RS03615	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JCP98_RS03620	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS03620	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS03630	COG3715	PTS system
JCP98_RS03635	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS03645	COG2261	transglycosylase associated protein
JCP98_RS03650	COG0006	proline dipeptidase activity
JCP98_RS03655	COG1302	Protein conserved in bacteria
JCP98_RS03660	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JCP98_RS03665	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JCP98_RS03670	COG1570	exodeoxyribonuclease VII activity
JCP98_RS03675	COG1722	exodeoxyribonuclease VII activity
JCP98_RS03685	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JCP98_RS03690	COG1438	arginine binding
JCP98_RS03695	COG0497	DNA recombination
JCP98_RS03735	COG0768	penicillin binding
JCP98_RS03770	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JCP98_RS03775	COG1799	cell septum assembly
JCP98_RS03785	COG2302	S4 RNA-binding domain
JCP98_RS03790	COG3599	regulation of cell shape
JCP98_RS03795	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JCP98_RS03800	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JCP98_RS03820	COG0673	inositol 2-dehydrogenase activity
JCP98_RS03825	COG0513	Belongs to the DEAD box helicase family
JCP98_RS03830	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCP98_RS03830	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JCP98_RS03835	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS03840	COG1447	Phosphotransferase system cellobiose-specific component IIA
JCP98_RS03845	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS03890	COG2309	aminopeptidase activity
JCP98_RS03900	COG0716	FMN binding
JCP98_RS03905	COG0024	Methionine aminopeptidase
JCP98_RS03910	COG1295	ribonuclease BN
JCP98_RS03915	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JCP98_RS03930	COG1215	transferase activity, transferring glycosyl groups
JCP98_RS03935	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JCP98_RS03945	COG1088	dTDP-glucose 4,6-dehydratase activity
JCP98_RS03950	COG1091	dTDP-4-dehydrorhamnose reductase activity
JCP98_RS03965	COG1682	transport, permease protein
JCP98_RS03975	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JCP98_RS03980	COG1216	Glycosyl transferase, family 2
JCP98_RS03980	COG0438	transferase activity, transferring glycosyl groups
JCP98_RS03995	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JCP98_RS04000	COG0463	Glycosyl transferase, family 2
JCP98_RS04005	COG0438	transferase activity, transferring glycosyl groups
JCP98_RS04030	COG1086	Polysaccharide biosynthesis protein
JCP98_RS04035	COG2089	acid synthase
JCP98_RS04040	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JCP98_RS04050	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JCP98_RS04065	COG1083	cytidylyl-transferase
JCP98_RS04115	COG3328	transposase activity
JCP98_RS04130	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JCP98_RS04135	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JCP98_RS04145	COG4585	Histidine kinase
JCP98_RS04155	COG0569	domain protein
JCP98_RS04185	COG2246	polysaccharide biosynthetic process
JCP98_RS04190	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JCP98_RS04205	COG1316	TRANSCRIPTIONal
JCP98_RS04210	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JCP98_RS04215	COG3397	chitin binding
JCP98_RS04220	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JCP98_RS04225	COG2137	regulation of response to DNA damage stimulus
JCP98_RS04230	COG1194	a g-specific adenine glycosylase
JCP98_RS04235	COG3557	Belongs to the UPF0374 family
JCP98_RS04245	COG0628	permease
JCP98_RS04250	COG1253	flavin adenine dinucleotide binding
JCP98_RS04255	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JCP98_RS04275	COG0542	response to heat
JCP98_RS04280	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS04285	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JCP98_RS04295	COG0438	transferase activity, transferring glycosyl groups
JCP98_RS04300	COG2084	Dehydrogenase
JCP98_RS04305	COG4703	Protein of unknown function (DUF1797)
JCP98_RS04310	COG0322	excinuclease ABC activity
JCP98_RS04315	COG1846	Transcriptional regulator
JCP98_RS04320	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JCP98_RS04330	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JCP98_RS04340	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JCP98_RS04350	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JCP98_RS04355	COG0439	Biotin carboxylase
JCP98_RS04360	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JCP98_RS04365	COG0825	malonyl-CoA metabolic process
JCP98_RS04370	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JCP98_RS04375	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JCP98_RS04380	COG1534	Rna-binding protein
JCP98_RS04385	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JCP98_RS04390	COG1713	HD superfamily hydrolase involved in NAD metabolism
JCP98_RS04395	COG0799	negative regulation of ribosome biogenesis
JCP98_RS04400	COG2226	methyltransferase
JCP98_RS04405	COG1323	Belongs to the UPF0348 family
JCP98_RS04410	COG0217	transcriptional regulatory protein
JCP98_RS04420	COG3973	AAA domain
JCP98_RS04425	COG2217	Heavy metal translocating P-type atpase
JCP98_RS04430	COG1942	4-Oxalocrotonate Tautomerase
JCP98_RS04435	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JCP98_RS04440	COG1737	Transcriptional regulator
JCP98_RS04445	COG0768	penicillin binding
JCP98_RS04460	COG0561	phosphatase activity
JCP98_RS04465	COG2252	PERMEase
JCP98_RS04470	COG2814	Major facilitator Superfamily
JCP98_RS04480	COG0587	DNA-directed DNA polymerase activity
JCP98_RS04485	COG0205	6-phosphofructokinase activity
JCP98_RS04495	COG0583	DNA-binding transcription factor activity
JCP98_RS04505	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JCP98_RS04520	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JCP98_RS04525	COG0745	RESPONSE REGULATOR receiver
JCP98_RS04530	COG5002	protein histidine kinase activity
JCP98_RS04630	COG3711	transcriptional antiterminator
JCP98_RS04640	COG1263	PTS System
JCP98_RS04640	COG2190	(PTS) system
JCP98_RS04640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS04645	COG1486	melibiose metabolic process
JCP98_RS04650	COG2190	(PTS) system
JCP98_RS04650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS04650	COG1263	PTS System
JCP98_RS04655	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS04675	COG1349	DNA-binding transcription factor activity
JCP98_RS04700	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
JCP98_RS04705	COG3623	hexulose-6-phosphate isomerase
JCP98_RS04715	COG0456	acetyltransferase
JCP98_RS04735	COG3711	transcriptional antiterminator
JCP98_RS04755	COG3775	system Galactitol-specific IIC component
JCP98_RS04770	COG0400	carboxylic ester hydrolase activity
JCP98_RS04775	COG0346	lactoylglutathione lyase activity
JCP98_RS04780	COG2188	Transcriptional regulator
JCP98_RS04785	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS04790	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS04795	COG0589	response to stress
JCP98_RS04810	COG1393	Belongs to the ArsC family
JCP98_RS04820	COG0351	phosphomethylpyrimidine kinase
JCP98_RS04825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JCP98_RS04830	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JCP98_RS04840	COG3425	synthase
JCP98_RS04845	COG0183	Belongs to the thiolase family
JCP98_RS04860	COG0656	L-ascorbic acid biosynthetic process
JCP98_RS04880	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JCP98_RS04880	COG0392	lysyltransferase activity
JCP98_RS04885	COG0596	Alpha beta hydrolase
JCP98_RS04890	COG0741	lytic transglycosylase activity
JCP98_RS04900	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JCP98_RS04905	COG0358	DNA primase activity
JCP98_RS04910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JCP98_RS04920	COG2996	Protein conserved in bacteria
JCP98_RS04925	COG0735	belongs to the Fur family
JCP98_RS04935	COG4974	Belongs to the 'phage' integrase family
JCP98_RS04945	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JCP98_RS04950	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JCP98_RS04955	COG1187	pseudouridine synthase activity
JCP98_RS04960	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JCP98_RS04965	COG1288	antiporter activity
JCP98_RS04970	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JCP98_RS04990	COG0514	ATP-dependent DNA helicase (RecQ)
JCP98_RS05000	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JCP98_RS05005	COG0539	negative regulation of cytoplasmic translation
JCP98_RS05010	COG1160	GTP binding
JCP98_RS05015	COG0776	regulation of translation
JCP98_RS05030	COG0457	Tetratricopeptide repeat
JCP98_RS05035	COG5582	Belongs to the UPF0302 family
JCP98_RS05040	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JCP98_RS05045	COG1694	Mazg nucleotide pyrophosphohydrolase
JCP98_RS05050	COG0617	tRNA 3'-terminal CCA addition
JCP98_RS05070	COG0025	NhaP-type Na H and K H
JCP98_RS05075	COG0488	(ABC) transporter
JCP98_RS05080	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JCP98_RS05090	COG1272	protein, Hemolysin III
JCP98_RS05095	COG1307	EDD domain protein, DegV family
JCP98_RS05100	COG2755	lipolytic protein G-D-S-L family
JCP98_RS05105	COG4698	Protein conserved in bacteria
JCP98_RS05115	COG4479	Belongs to the UPF0346 family
JCP98_RS05120	COG0681	Belongs to the peptidase S26 family
JCP98_RS05140	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JCP98_RS05145	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JCP98_RS05150	COG0758	DNA mediated transformation
JCP98_RS05155	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JCP98_RS05160	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JCP98_RS05165	COG4974	Belongs to the 'phage' integrase family
JCP98_RS05170	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JCP98_RS05175	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JCP98_RS05195	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JCP98_RS05200	COG1832	CoA-binding protein
JCP98_RS05205	COG0187	DNA topoisomerase II activity
JCP98_RS05215	COG1882	Formate acetyltransferase
JCP98_RS05220	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JCP98_RS05225	COG1227	inorganic diphosphatase activity
JCP98_RS05245	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
JCP98_RS05255	COG1073	alpha beta
JCP98_RS05260	COG1609	Transcriptional regulator
JCP98_RS05270	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JCP98_RS05280	COG1732	Glycine betaine
JCP98_RS05295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JCP98_RS05305	COG1116	anion transmembrane transporter activity
JCP98_RS05310	COG0084	hydrolase, TatD family'
JCP98_RS05315	COG3942	CHAP domain
JCP98_RS05315	COG1388	LysM domain
JCP98_RS05340	COG3328	transposase activity
JCP98_RS05370	COG0436	Aminotransferase
JCP98_RS05390	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JCP98_RS05395	COG4565	transcriptional regulatory protein
JCP98_RS05400	COG3290	protein histidine kinase activity
JCP98_RS05405	COG3290	protein histidine kinase activity
JCP98_RS05415	COG2268	Band 7 protein
JCP98_RS05430	COG0673	inositol 2-dehydrogenase activity
JCP98_RS05440	COG1876	peptidase activity
JCP98_RS05445	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS05445	COG1388	LysM domain
JCP98_RS05455	COG1653	transport
JCP98_RS05460	COG1175	transmembrane transport
JCP98_RS05465	COG0395	ABC-type sugar transport system, permease component
JCP98_RS05475	COG0673	inositol 2-dehydrogenase activity
JCP98_RS05480	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JCP98_RS05485	COG2233	PERMEase
JCP98_RS05490	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JCP98_RS05495	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JCP98_RS05500	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JCP98_RS05510	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JCP98_RS05515	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JCP98_RS05520	COG0047	phosphoribosylformylglycinamidine synthase activity
JCP98_RS05525	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JCP98_RS05535	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JCP98_RS05540	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JCP98_RS05545	COG0138	bifunctional purine biosynthesis protein purh
JCP98_RS05550	COG0151	Belongs to the GarS family
JCP98_RS05555	COG4989	oxidoreductase activity
JCP98_RS05565	COG2972	Histidine kinase
JCP98_RS05575	COG4213	ABC transporter substrate-binding protein
JCP98_RS05585	COG4214	carbohydrate transport
JCP98_RS05590	COG0516	GMP reductase activity
JCP98_RS05595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCP98_RS05605	COG0022	dehydrogenase e1 component
JCP98_RS05620	COG4476	Belongs to the UPF0223 family
JCP98_RS05625	COG0483	inositol monophosphate 1-phosphatase activity
JCP98_RS05630	COG1217	gtp-binding protein TYPA
JCP98_RS05635	COG0514	ATP-dependent DNA helicase (RecQ)
JCP98_RS05640	COG4838	Belongs to the UPF0358 family
JCP98_RS05645	COG0772	Belongs to the SEDS family
JCP98_RS05650	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JCP98_RS05665	COG4471	UPF0298 protein
JCP98_RS05670	COG0742	ribosomal rna small subunit methyltransferase
JCP98_RS05675	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JCP98_RS05680	COG3480	Lon protease (S16) C-terminal proteolytic domain
JCP98_RS05685	COG1596	polysaccharide export
JCP98_RS05685	COG1555	photosystem II stabilization
JCP98_RS05700	COG2131	deaminase
JCP98_RS05705	COG2333	competence protein COMEC
JCP98_RS05705	COG0658	competence protein
JCP98_RS05710	COG1466	dna polymerase III delta subunit
JCP98_RS05715	COG0268	Binds directly to 16S ribosomal RNA
JCP98_RS05725	COG2707	UPF0756 membrane protein
JCP98_RS05730	COG2217	Heavy metal translocating P-type atpase
JCP98_RS05735	COG1968	undecaprenyl-diphosphatase activity
JCP98_RS05755	COG1666	GTP binding
JCP98_RS05760	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JCP98_RS05765	COG2151	metal-sulfur cluster biosynthetic enzyme
JCP98_RS05780	COG3942	CHAP domain
JCP98_RS05780	COG1388	LysM domain
JCP98_RS05840	COG4990	cell redox homeostasis
JCP98_RS05860	COG3104	oligopeptide transport
JCP98_RS05870	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JCP98_RS05875	COG1074	ATP-dependent DNA helicase activity
JCP98_RS05880	COG1733	regulation of RNA biosynthetic process
JCP98_RS05885	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JCP98_RS05890	COG0072	phenylalanine-tRNA ligase activity
JCP98_RS05890	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCP98_RS05900	COG1126	abc transporter atp-binding protein
JCP98_RS05905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCP98_RS05910	COG0765	amino acid transport
JCP98_RS05915	COG0765	amino acid transport
JCP98_RS05920	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
JCP98_RS05925	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JCP98_RS05935	COG0517	IMP dehydrogenase activity
JCP98_RS05940	COG0668	transmembrane transport
JCP98_RS05945	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JCP98_RS05950	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JCP98_RS05955	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JCP98_RS05985	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JCP98_RS05995	COG1234	tRNA 3'-trailer cleavage
JCP98_RS06000	COG0300	oxidoreductase activity
JCP98_RS06005	COG5416	Lipopolysaccharide assembly protein A domain
JCP98_RS06010	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JCP98_RS06010	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JCP98_RS06015	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JCP98_RS06025	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JCP98_RS06045	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS06045	COG1388	LysM domain
JCP98_RS06050	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JCP98_RS06055	COG0735	belongs to the Fur family
JCP98_RS06060	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS06070	COG1846	Transcriptional regulator
JCP98_RS06080	COG3935	DnaD domain protein
JCP98_RS06085	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JCP98_RS06095	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JCP98_RS06100	COG3331	DNA recombination
JCP98_RS06105	COG4474	Belongs to the UPF0398 family
JCP98_RS06110	COG3599	regulation of cell shape
JCP98_RS06120	COG0116	Belongs to the methyltransferase superfamily
JCP98_RS06125	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JCP98_RS06130	COG1418	mRNA catabolic process
JCP98_RS06135	COG0156	8-amino-7-oxononanoate synthase activity
JCP98_RS06140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JCP98_RS06145	COG0531	amino acid
JCP98_RS06160	COG0513	Belongs to the DEAD box helicase family
JCP98_RS06165	COG2153	protein acetylation
JCP98_RS06170	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JCP98_RS06175	COG4684	Psort location CytoplasmicMembrane, score
JCP98_RS06185	COG0328	RNA-DNA hybrid ribonuclease activity
JCP98_RS06195	COG1278	Cold shock
JCP98_RS06200	COG2759	Belongs to the formate--tetrahydrofolate ligase family
JCP98_RS06215	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JCP98_RS06220	COG0564	pseudouridine synthase activity
JCP98_RS06230	COG2233	PERMEase
JCP98_RS06235	COG0540	Belongs to the ATCase OTCase family
JCP98_RS06240	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JCP98_RS06245	COG0505	Belongs to the CarA family
JCP98_RS06250	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JCP98_RS06255	COG0543	2 iron, 2 sulfur cluster binding
JCP98_RS06265	COG0284	orotidine-5'-phosphate decarboxylase activity
JCP98_RS06295	COG1293	RNA-binding protein homologous to eukaryotic snRNP
JCP98_RS06310	COG4120	Belongs to the binding-protein-dependent transport system permease family
JCP98_RS06320	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JCP98_RS06355	COG0039	L-malate dehydrogenase activity
JCP98_RS06375	COG3037	sugar-specific permease SgaT UlaA
JCP98_RS06385	COG3711	transcriptional antiterminator
JCP98_RS06395	COG0673	inositol 2-dehydrogenase activity
JCP98_RS06445	COG0745	RESPONSE REGULATOR receiver
JCP98_RS06450	COG5002	protein histidine kinase activity
JCP98_RS06455	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
JCP98_RS06480	COG0351	phosphomethylpyrimidine kinase
JCP98_RS06490	COG4475	Protein of unknown function (DUF436)
JCP98_RS06495	COG0366	Alpha amylase catalytic
JCP98_RS06510	COG1307	EDD domain protein, DegV family
JCP98_RS06515	COG2244	polysaccharide biosynthetic process
JCP98_RS06565	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JCP98_RS06570	COG0194	GDP metabolic process
JCP98_RS06595	COG0765	amino acid transport
JCP98_RS06600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCP98_RS06610	COG0167	dihydroorotate dehydrogenase activity
JCP98_RS06625	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JCP98_RS06635	COG3833	ABC-type maltose transport systems, permease component
JCP98_RS06640	COG1175	transmembrane transport
JCP98_RS06645	COG2182	Extracellular solute-binding protein
JCP98_RS06650	COG0366	Alpha amylase catalytic
JCP98_RS06655	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JCP98_RS06665	COG1764	response to oxidative stress
JCP98_RS06670	COG1846	Transcriptional regulator
JCP98_RS06675	COG0628	permease
JCP98_RS06690	COG1312	Catalyzes the dehydration of D-mannonate
JCP98_RS06695	COG0246	Mannitol dehydrogenase
JCP98_RS06705	COG0450	alkyl hydroperoxide reductase
JCP98_RS06750	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JCP98_RS06765	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JCP98_RS06795	COG2946	Replication initiation factor
JCP98_RS06815	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JCP98_RS06835	COG0004	ammonium transporteR
JCP98_RS06840	COG2261	transglycosylase associated protein
JCP98_RS06870	COG3655	Transcriptional regulator
JCP98_RS06885	COG2261	transglycosylase associated protein
JCP98_RS06905	COG1028	Short-chain dehydrogenase reductase Sdr
JCP98_RS06920	COG1442	glycosyl transferase family 8
JCP98_RS06925	COG1442	glycosyl transferase family 8
JCP98_RS06930	COG0561	phosphatase activity
JCP98_RS06955	COG1476	TRANSCRIPTIONal
JCP98_RS06975	COG1278	Cold shock
JCP98_RS06990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS06995	COG1312	Catalyzes the dehydration of D-mannonate
JCP98_RS07015	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS07020	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS07030	COG0371	Dehydrogenase
JCP98_RS07045	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
JCP98_RS07050	COG1737	Transcriptional regulator
JCP98_RS07050	COG0837	glucose binding
JCP98_RS07060	COG2272	Belongs to the type-B carboxylesterase lipase family
JCP98_RS07065	COG1073	alpha beta
JCP98_RS07100	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JCP98_RS07120	COG3732	PTS system glucitol sorbitol-specific
JCP98_RS07125	COG3730	PTS system glucitol sorbitol-specific
JCP98_RS07135	COG3711	transcriptional antiterminator
JCP98_RS07135	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS07160	COG3328	transposase activity
JCP98_RS07170	COG4974	Belongs to the 'phage' integrase family
JCP98_RS07175	COG0582	viral genome integration into host DNA
JCP98_RS07195	COG3250	beta-galactosidase activity
JCP98_RS07210	COG2211	Major facilitator Superfamily
JCP98_RS07220	COG1904	glucuronate isomerase
JCP98_RS07225	COG1312	Catalyzes the dehydration of D-mannonate
JCP98_RS07230	COG0246	Mannitol dehydrogenase
JCP98_RS07235	COG2188	Transcriptional regulator
JCP98_RS07290	COG0433	COG0433 Predicted ATPase
JCP98_RS07335	COG2946	Replication initiation factor
JCP98_RS07395	COG0481	GTPase activity
JCP98_RS07415	COG0542	response to heat
JCP98_RS07430	COG1597	lipid kinase activity
JCP98_RS07435	COG2195	Cleaves the N-terminal amino acid of tripeptides
JCP98_RS07440	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JCP98_RS07445	COG2384	SAM-dependent methyltransferase
JCP98_RS07455	COG1484	DNA-dependent DNA replication
JCP98_RS07465	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JCP98_RS07475	COG0237	dephospho-CoA kinase activity
JCP98_RS07480	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JCP98_RS07485	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JCP98_RS07485	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JCP98_RS07500	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JCP98_RS07505	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JCP98_RS07510	COG3091	SprT-like family
JCP98_RS07515	COG2183	response to ionizing radiation
JCP98_RS07525	COG1054	Belongs to the UPF0176 family
JCP98_RS07555	COG0546	phosphoglycolate phosphatase activity
JCP98_RS07560	COG0588	phosphoglycerate mutase activity
JCP98_RS07605	COG4753	response regulator
JCP98_RS07605	COG2207	Transcriptional regulator
JCP98_RS07615	COG2972	Histidine kinase
JCP98_RS07620	COG0077	Prephenate dehydratase
JCP98_RS07625	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JCP98_RS07630	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JCP98_RS07635	COG0287	Prephenate dehydrogenase
JCP98_RS07640	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JCP98_RS07650	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JCP98_RS07655	COG3250	beta-galactosidase activity
JCP98_RS07670	COG1609	Transcriptional regulator
JCP98_RS07680	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JCP98_RS07690	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JCP98_RS07695	COG1597	lipid kinase activity
JCP98_RS07700	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JCP98_RS07705	COG0154	amidase activity
JCP98_RS07710	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JCP98_RS07715	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JCP98_RS07720	COG0210	DNA helicase
JCP98_RS07730	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCP98_RS07730	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS07730	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JCP98_RS07735	COG1105	Belongs to the carbohydrate kinase PfkB family
JCP98_RS07740	COG1349	DNA-binding transcription factor activity
JCP98_RS07760	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JCP98_RS07765	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JCP98_RS07770	COG0544	peptidyl-prolyl cis-trans isomerase activity
JCP98_RS07780	COG1714	RDD family
JCP98_RS07795	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JCP98_RS07805	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JCP98_RS07875	COG1481	regulation of sporulation
JCP98_RS07880	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JCP98_RS07885	COG1660	Displays ATPase and GTPase activities
JCP98_RS07900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JCP98_RS07905	COG0556	nucleotide-excision repair
JCP98_RS07910	COG0765	amino acid transport
JCP98_RS07915	COG1126	abc transporter atp-binding protein
JCP98_RS07920	COG0484	heat shock protein binding
JCP98_RS07925	COG0443	Heat shock 70 kDa protein
JCP98_RS07930	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JCP98_RS07935	COG1420	regulation of RNA biosynthetic process
JCP98_RS07940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JCP98_RS07985	COG0693	protein deglycase activity
JCP98_RS07995	COG1619	proteins homologs of microcin C7 resistance protein MccF
JCP98_RS08005	COG5646	InterPro IPR014922
JCP98_RS08015	COG4975	Glucose uptake
JCP98_RS08030	COG0196	riboflavin kinase activity
JCP98_RS08035	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JCP98_RS08040	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
JCP98_RS08045	COG1175	transmembrane transport
JCP98_RS08050	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JCP98_RS08065	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JCP98_RS08070	COG0195	Participates in both transcription termination and antitermination
JCP98_RS08075	COG0779	Required for maturation of 30S ribosomal subunits
JCP98_RS08080	COG2176	DNA-directed DNA polymerase activity
JCP98_RS08085	COG0442	prolyl-tRNA aminoacylation
JCP98_RS08090	COG0750	zinc metalloprotease
JCP98_RS08095	COG4589	Belongs to the CDS family
JCP98_RS08100	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JCP98_RS08110	COG0233	cytoplasmic translational termination
JCP98_RS08115	COG0528	UMP kinase activity
JCP98_RS08120	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JCP98_RS08125	COG0052	Belongs to the universal ribosomal protein uS2 family
JCP98_RS08130	COG1438	arginine binding
JCP98_RS08140	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS08145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS08150	COG0018	arginyl-trna synthetase
JCP98_RS08165	COG2235	arginine
JCP98_RS08170	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JCP98_RS08180	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JCP98_RS08185	COG0456	acetyltransferase
JCP98_RS08195	COG1214	PFAM Peptidase M22, glycoprotease
JCP98_RS08205	COG1609	Transcriptional regulator
JCP98_RS08210	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JCP98_RS08215	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JCP98_RS08230	COG3189	MarR family transcriptional regulator
JCP98_RS08235	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JCP98_RS08240	COG1940	carbohydrate kinase activity
JCP98_RS08255	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JCP98_RS08260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCP98_RS08265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JCP98_RS08270	COG1120	ATPase activity
JCP98_RS08285	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JCP98_RS08290	COG4876	unkown
JCP98_RS08295	COG0367	asparagine synthase
JCP98_RS08300	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JCP98_RS08310	COG1309	transcriptional regulator
JCP98_RS08330	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JCP98_RS08345	COG0584	glycerophosphoryl diester phosphodiesterase
JCP98_RS08375	COG0166	Belongs to the GPI family
JCP98_RS08380	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JCP98_RS08385	COG2081	HI0933 family
JCP98_RS08390	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JCP98_RS08395	COG0710	3-dehydroquinate dehydratase activity
JCP98_RS08400	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JCP98_RS08405	COG1368	sulfuric ester hydrolase activity
JCP98_RS08420	COG3850	Histidine kinase
JCP98_RS08420	COG5002	protein histidine kinase activity
JCP98_RS08425	COG0745	RESPONSE REGULATOR receiver
JCP98_RS08450	COG3328	transposase activity
JCP98_RS08465	COG3328	transposase activity
JCP98_RS08480	COG1956	GAF domain-containing protein
JCP98_RS08485	COG3527	Alpha-acetolactate decarboxylase
JCP98_RS08490	COG0028	Belongs to the TPP enzyme family
JCP98_RS08500	COG3328	transposase activity
JCP98_RS08510	COG0395	ABC-type sugar transport system, permease component
JCP98_RS08520	COG0583	DNA-binding transcription factor activity
JCP98_RS08525	COG0789	Transcriptional regulator
JCP98_RS08530	COG2814	Major facilitator Superfamily
JCP98_RS08590	COG4974	Belongs to the 'phage' integrase family
JCP98_RS08615	COG4372	Transposase
JCP98_RS08645	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS08645	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS08650	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS08655	COG3715	PTS system
JCP98_RS08660	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCP98_RS08660	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JCP98_RS08665	COG1940	carbohydrate kinase activity
JCP98_RS08670	COG2190	(PTS) system
JCP98_RS08685	COG1609	Transcriptional regulator
JCP98_RS08710	COG3385	transposase activity
JCP98_RS08730	COG0741	lytic transglycosylase activity
JCP98_RS08730	COG0791	NLP P60 protein
JCP98_RS08760	COG1196	nuclear chromosome segregation
JCP98_RS08790	COG2946	Replication initiation factor
JCP98_RS08805	COG1674	ftsk spoiiie
JCP98_RS08835	COG0335	large ribosomal subunit rRNA binding
JCP98_RS08840	COG0336	Belongs to the RNA methyltransferase TrmD family
JCP98_RS08845	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JCP98_RS08855	COG1837	Belongs to the UPF0109 family
JCP98_RS08860	COG0228	four-way junction DNA binding
JCP98_RS08865	COG0431	NADPH-dependent FMN reductase
JCP98_RS08870	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JCP98_RS08875	COG0519	Catalyzes the synthesis of GMP from XMP
JCP98_RS08880	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JCP98_RS08885	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JCP98_RS08895	COG0745	RESPONSE REGULATOR receiver
JCP98_RS08900	COG5002	protein histidine kinase activity
JCP98_RS08905	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JCP98_RS08915	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JCP98_RS08940	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JCP98_RS08960	COG3328	transposase activity
JCP98_RS09000	COG0714	Associated with various cellular activities
JCP98_RS09020	COG2217	Heavy metal translocating P-type atpase
JCP98_RS09025	COG2217	Heavy metal translocating P-type atpase
JCP98_RS09030	COG2608	mercury ion transmembrane transporter activity
JCP98_RS09035	COG3682	Transcriptional regulator
JCP98_RS09045	COG0531	amino acid
JCP98_RS09050	COG2217	Heavy metal translocating P-type atpase
JCP98_RS09070	COG0017	Asparaginyl-tRNA synthetase
JCP98_RS09075	COG0436	Aminotransferase
JCP98_RS09085	COG1199	ATP-dependent helicase activity
JCP98_RS09085	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JCP98_RS09100	COG1278	Cold shock
JCP98_RS09125	COG1686	Belongs to the peptidase S11 family
JCP98_RS09135	COG0038	chloride channel
JCP98_RS09150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JCP98_RS09155	COG1254	Belongs to the acylphosphatase family
JCP98_RS09160	COG0706	membrane insertase activity
JCP98_RS09165	COG3684	Belongs to the aldolase LacD family
JCP98_RS09215	COG1216	Glycosyl transferase, family 2
JCP98_RS09220	COG0438	transferase activity, transferring glycosyl groups
JCP98_RS09245	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JCP98_RS09250	COG4464	protein tyrosine phosphatase activity
JCP98_RS09255	COG0489	protein tyrosine kinase activity
JCP98_RS09260	COG3944	biosynthesis protein
JCP98_RS09265	COG1316	TRANSCRIPTIONal
JCP98_RS09275	COG0751	glycine-tRNA ligase activity
JCP98_RS09280	COG0752	glycyl-tRNA synthetase alpha subunit
JCP98_RS09285	COG1381	Involved in DNA repair and RecF pathway recombination
JCP98_RS09290	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JCP98_RS09295	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JCP98_RS09300	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JCP98_RS09310	COG1702	phosphate starvation-inducible protein PhoH
JCP98_RS09315	COG1114	Component of the transport system for branched-chain amino acids
JCP98_RS09320	COG1610	YqeY-like protein
JCP98_RS09325	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JCP98_RS09330	COG0735	belongs to the Fur family
JCP98_RS09335	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JCP98_RS09340	COG0640	Transcriptional regulator
JCP98_RS09345	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JCP98_RS09350	COG0492	ferredoxin-NADP+ reductase activity
JCP98_RS09355	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS09360	COG1486	melibiose metabolic process
JCP98_RS09365	COG1737	Transcriptional regulator
JCP98_RS09370	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS09370	COG1263	PTS System
JCP98_RS09370	COG2190	(PTS) system
JCP98_RS09380	COG1132	(ABC) transporter
JCP98_RS09385	COG1132	(ABC) transporter
JCP98_RS09390	COG3763	UPF0154 protein
JCP98_RS09395	COG1914	H( )-stimulated, divalent metal cation uptake system
JCP98_RS09405	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JCP98_RS09415	COG3328	transposase activity
JCP98_RS09450	COG1609	Transcriptional regulator
JCP98_RS09460	COG4980	gas vesicle protein
JCP98_RS09470	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JCP98_RS09475	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JCP98_RS09480	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JCP98_RS09485	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JCP98_RS09490	COG1950	PFAM Membrane protein of
JCP98_RS09515	COG0704	Plays a role in the regulation of phosphate uptake
JCP98_RS09520	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JCP98_RS09525	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JCP98_RS09530	COG0581	inorganic phosphate transmembrane transporter activity
JCP98_RS09535	COG0573	inorganic phosphate transmembrane transporter activity
JCP98_RS09540	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JCP98_RS09545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JCP98_RS09550	COG2177	Part of the ABC transporter FtsEX involved in
JCP98_RS09555	COG2884	Cell division ATP-binding protein ftsE
JCP98_RS09565	COG0653	protein targeting
JCP98_RS09580	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JCP98_RS09585	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS09595	COG1739	Uncharacterized protein family UPF0029
JCP98_RS09600	COG2188	Transcriptional regulator
JCP98_RS09625	COG1940	carbohydrate kinase activity
JCP98_RS09645	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JCP98_RS09660	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JCP98_RS09665	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JCP98_RS09670	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JCP98_RS09675	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JCP98_RS09680	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JCP98_RS09685	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JCP98_RS09690	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JCP98_RS09695	COG0356	it plays a direct role in the translocation of protons across the membrane
JCP98_RS09705	COG1647	Serine aminopeptidase, S33
JCP98_RS09710	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JCP98_RS09715	COG2388	GCN5-related N-acetyl-transferase
JCP98_RS09725	COG1957	nucleoside hydrolase
JCP98_RS09735	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JCP98_RS09745	COG0149	triose-phosphate isomerase activity
JCP98_RS09750	COG0126	phosphoglycerate kinase activity
JCP98_RS09760	COG2390	Transcriptional regulator
JCP98_RS09765	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JCP98_RS09785	COG1595	DNA-templated transcription, initiation
JCP98_RS09800	COG0095	Lipoate-protein ligase
JCP98_RS09805	COG1078	dGTPase activity
JCP98_RS09810	COG0561	phosphatase activity
JCP98_RS09815	COG0494	nUDIX hydrolase
JCP98_RS09820	COG0346	lactoylglutathione lyase activity
JCP98_RS09830	COG2423	ornithine cyclodeaminase activity
JCP98_RS09835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JCP98_RS09840	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCP98_RS09845	COG1394	ATPase activity, coupled to movement of substances
JCP98_RS09850	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
JCP98_RS09855	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
JCP98_RS09860	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
JCP98_RS09865	COG1527	subunit (C
JCP98_RS09870	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
JCP98_RS09875	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JCP98_RS09880	COG1269	ATP hydrolysis coupled proton transport
JCP98_RS09890	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JCP98_RS09895	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
JCP98_RS09905	COG4152	abc transporter atp-binding protein
JCP98_RS09910	COG0322	excinuclease ABC activity
JCP98_RS09915	COG3118	belongs to the thioredoxin family
JCP98_RS09920	COG1193	negative regulation of DNA recombination
JCP98_RS09935	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JCP98_RS09955	COG1136	(ABC) transporter
JCP98_RS09965	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS09995	COG1304	FMN binding
JCP98_RS10005	COG0281	malic enzyme
JCP98_RS10045	COG4695	Portal protein
JCP98_RS10125	COG4974	Belongs to the 'phage' integrase family
JCP98_RS10135	COG3906	Belongs to the UPF0473 family
JCP98_RS10140	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JCP98_RS10145	COG4472	Bacterial protein of unknown function (DUF965)
JCP98_RS10175	COG4555	ABC transporter
JCP98_RS10185	COG3689	TIGRFAM TIGR03943 family protein
JCP98_RS10190	COG0701	Predicted permease
JCP98_RS10195	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JCP98_RS10200	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JCP98_RS10205	COG0488	(ABC) transporter
JCP98_RS10210	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JCP98_RS10225	COG0395	ABC-type sugar transport system, permease component
JCP98_RS10245	COG0662	Cupin 2, conserved barrel domain protein
JCP98_RS10245	COG2207	Transcriptional regulator
JCP98_RS10250	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS10260	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JCP98_RS10265	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JCP98_RS10270	COG0584	glycerophosphoryl diester phosphodiesterase
JCP98_RS10280	COG0740	serine-type endopeptidase activity
JCP98_RS10285	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JCP98_RS10295	COG1132	(ABC) transporter
JCP98_RS10305	COG5503	Protein of unknown function (DUF1447)
JCP98_RS10320	COG1278	Cold shock
JCP98_RS10410	COG1196	nuclear chromosome segregation
JCP98_RS10410	COG0739	heme binding
JCP98_RS10410	COG0741	lytic transglycosylase activity
JCP98_RS10555	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JCP98_RS10565	COG3723	Recombinational DNA repair protein, rece pathway
JCP98_RS10570	COG5377	YqaJ viral recombinase family
JCP98_RS10620	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JCP98_RS10625	COG2003	Belongs to the UPF0758 family
JCP98_RS10630	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS10635	COG0285	dihydrofolate synthase activity
JCP98_RS10640	COG0525	valine-tRNA ligase activity
JCP98_RS10645	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JCP98_RS10650	COG0301	tRNA thio-modification
JCP98_RS10655	COG1104	cysteine desulfurase activity
JCP98_RS10665	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JCP98_RS10675	COG0561	phosphatase activity
JCP98_RS10680	COG1801	Protein of unknown function DUF72
JCP98_RS10700	COG3579	cysteine-type endopeptidase activity
JCP98_RS10750	COG4372	Transposase
JCP98_RS10785	COG1098	S1 RNA binding domain
JCP98_RS10790	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JCP98_RS10805	COG0492	ferredoxin-NADP+ reductase activity
JCP98_RS10810	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JCP98_RS10825	COG4470	Protein conserved in bacteria
JCP98_RS10830	COG0737	Belongs to the 5'-nucleotidase family
JCP98_RS10845	COG0590	tRNA wobble adenosine to inosine editing
JCP98_RS10850	COG2508	Transcriptional regulator
JCP98_RS10860	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JCP98_RS10860	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
JCP98_RS10875	COG2738	Putative neutral zinc metallopeptidase
JCP98_RS10880	COG2824	Alkylphosphonate utilization operon protein PhnA
JCP98_RS10885	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JCP98_RS10890	COG4109	DRTGG domain
JCP98_RS10895	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JCP98_RS10915	COG0577	efflux transmembrane transporter activity
JCP98_RS10920	COG1136	(ABC) transporter
JCP98_RS10930	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JCP98_RS10935	COG1288	antiporter activity
JCP98_RS10940	COG4821	SIS domain
JCP98_RS10955	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JCP98_RS10960	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
JCP98_RS10965	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JCP98_RS10970	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS10975	COG3715	PTS system
JCP98_RS11000	COG1132	(ABC) transporter
JCP98_RS11005	COG1132	(ABC) transporter
JCP98_RS11015	COG1803	Methylglyoxal synthase
JCP98_RS11020	COG3842	ATPase activity
JCP98_RS11030	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JCP98_RS11035	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JCP98_RS11040	COG0084	hydrolase, TatD family'
JCP98_RS11045	COG0531	amino acid
JCP98_RS11055	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCP98_RS11055	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JCP98_RS11070	COG0675	Transposase, IS605 OrfB family
JCP98_RS11075	COG4608	Belongs to the ABC transporter superfamily
JCP98_RS11080	COG0444	Belongs to the ABC transporter superfamily
JCP98_RS11085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JCP98_RS11090	COG0601	transmembrane transport
JCP98_RS11100	COG4166	transmembrane transport
JCP98_RS11115	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JCP98_RS11120	COG1674	ftsk spoiiie
JCP98_RS11120	COG1280	lysine exporter protein (LysE YggA)
JCP98_RS11125	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS11130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JCP98_RS11135	COG1126	abc transporter atp-binding protein
JCP98_RS11140	COG0765	amino acid transport
JCP98_RS11185	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JCP98_RS11195	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JCP98_RS11200	COG0009	L-threonylcarbamoyladenylate synthase
JCP98_RS11210	COG2890	protein-(glutamine-N5) methyltransferase activity
JCP98_RS11215	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JCP98_RS11220	COG1435	thymidine kinase activity
JCP98_RS11230	COG2226	methyltransferase
JCP98_RS11235	COG0681	Belongs to the peptidase S26 family
JCP98_RS11255	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JCP98_RS11260	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JCP98_RS11265	COG3442	glutamine amidotransferase
JCP98_RS11270	COG0246	Mannitol dehydrogenase
JCP98_RS11275	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS11280	COG2213	PTS system mannitol-specific
JCP98_RS11285	COG1131	(ABC) transporter
JCP98_RS11295	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS11315	COG2213	PTS system mannitol-specific
JCP98_RS11320	COG1482	cell wall glycoprotein biosynthetic process
JCP98_RS11335	COG1132	(ABC) transporter
JCP98_RS11355	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JCP98_RS11365	COG0628	permease
JCP98_RS11375	COG2706	6-phosphogluconolactonase activity
JCP98_RS11390	COG1368	sulfuric ester hydrolase activity
JCP98_RS11400	COG2160	L-arabinose isomerase activity
JCP98_RS11405	COG0235	Class ii aldolase
JCP98_RS11425	COG3940	Belongs to the glycosyl hydrolase 43 family
JCP98_RS11430	COG3534	alpha-L-arabinofuranosidase
JCP98_RS11440	COG0395	ABC-type sugar transport system, permease component
JCP98_RS11445	COG1175	transmembrane transport
JCP98_RS11465	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JCP98_RS11470	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JCP98_RS11480	COG0789	Transcriptional regulator
JCP98_RS11485	COG1609	Transcriptional regulator
JCP98_RS11515	COG0459	protein refolding
JCP98_RS11520	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JCP98_RS11530	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS11540	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JCP98_RS11555	COG5002	protein histidine kinase activity
JCP98_RS11560	COG0745	RESPONSE REGULATOR receiver
JCP98_RS11565	COG1307	EDD domain protein, DegV family
JCP98_RS11605	COG4175	Glycine betaine
JCP98_RS11605	COG3448	diguanylate cyclase activity
JCP98_RS11630	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JCP98_RS11635	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JCP98_RS11645	COG0628	permease
JCP98_RS11650	COG1285	pathogenesis
JCP98_RS11655	COG0363	glucosamine-6-phosphate deaminase activity
JCP98_RS11660	COG0488	(ABC) transporter
JCP98_RS11675	COG2814	Major facilitator Superfamily
JCP98_RS11685	COG0222	ribosome binding
JCP98_RS11690	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JCP98_RS11695	COG0081	regulation of translation
JCP98_RS11700	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JCP98_RS11705	COG1760	l-serine dehydratase
JCP98_RS11710	COG1760	l-serine dehydratase
JCP98_RS11715	COG1304	FMN binding
JCP98_RS11720	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JCP98_RS11725	COG0250	Participates in transcription elongation, termination and antitermination
JCP98_RS11730	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JCP98_RS11735	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JCP98_RS11750	COG1597	lipid kinase activity
JCP98_RS11765	COG1131	(ABC) transporter
JCP98_RS11770	COG4585	Histidine kinase
JCP98_RS11775	COG2197	response regulator
JCP98_RS11785	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JCP98_RS11795	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JCP98_RS11800	COG2226	methyltransferase
JCP98_RS11805	COG3142	Participates in the control of copper homeostasis
JCP98_RS11810	COG2239	Acts as a magnesium transporter
JCP98_RS11815	COG0564	pseudouridine synthase activity
JCP98_RS11820	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JCP98_RS11825	COG2357	RelA SpoT domain protein
JCP98_RS11830	COG4116	CYTH
JCP98_RS11855	COG4862	establishment of competence for transformation
JCP98_RS11860	COG1393	Belongs to the ArsC family
JCP98_RS11875	COG0419	ATPase involved in DNA repair
JCP98_RS11880	COG0420	3'-5' exonuclease activity
JCP98_RS11885	COG0204	Acyl-transferase
JCP98_RS11890	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JCP98_RS11895	COG2827	Endonuclease containing a URI domain
JCP98_RS11900	COG2755	lipolytic protein G-D-S-L family
JCP98_RS11900	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JCP98_RS11905	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JCP98_RS11910	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JCP98_RS11915	COG0124	histidyl-tRNA synthetase
JCP98_RS11920	COG0667	Aldo Keto reductase
JCP98_RS11925	COG2124	cytochrome p450
JCP98_RS11930	COG1490	D-aminoacyl-tRNA deacylase activity
JCP98_RS11935	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JCP98_RS11940	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JCP98_RS11945	COG2264	protein methyltransferase activity
JCP98_RS11955	COG2094	Belongs to the DNA glycosylase MPG family
JCP98_RS11960	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JCP98_RS11975	COG0589	response to stress
JCP98_RS11985	COG0488	(ABC) transporter
JCP98_RS11990	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JCP98_RS11995	COG0827	DNA restriction-modification system
JCP98_RS12020	COG4537	Required for transformation and DNA binding
JCP98_RS12025	COG1459	type II secretion system
JCP98_RS12030	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JCP98_RS12035	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JCP98_RS12040	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JCP98_RS12050	COG4473	ABC transporter
JCP98_RS12055	COG1131	(ABC) transporter
JCP98_RS12060	COG0537	adenosine 5'-monophosphoramidase activity
JCP98_RS12070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JCP98_RS12075	COG3481	metal-dependent phosphohydrolase, HD sub domain
JCP98_RS12080	COG4717	serine-type aminopeptidase activity
JCP98_RS12085	COG0420	3'-5' exonuclease activity
JCP98_RS12090	COG0561	phosphatase activity
JCP98_RS12115	COG2211	Major facilitator Superfamily
JCP98_RS12120	COG3507	Belongs to the glycosyl hydrolase 43 family
JCP98_RS12135	COG1073	alpha beta
JCP98_RS12145	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JCP98_RS12150	COG1653	transport
JCP98_RS12160	COG4209	transmembrane transport
JCP98_RS12165	COG0395	ABC-type sugar transport system, permease component
JCP98_RS12170	COG2207	Transcriptional regulator
JCP98_RS12175	COG1609	Transcriptional regulator
JCP98_RS12180	COG0246	Mannitol dehydrogenase
JCP98_RS12185	COG2721	sulfolactate sulfo-lyase activity
JCP98_RS12190	COG1904	glucuronate isomerase
JCP98_RS12195	COG2755	lipolytic protein G-D-S-L family
JCP98_RS12205	COG1132	(ABC) transporter
JCP98_RS12210	COG3679	Belongs to the UPF0342 family
JCP98_RS12215	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JCP98_RS12220	COG0564	pseudouridine synthase activity
JCP98_RS12225	COG1940	carbohydrate kinase activity
JCP98_RS12230	COG0383	alpha-mannosidase activity
JCP98_RS12250	COG2207	Transcriptional regulator
JCP98_RS12250	COG4753	response regulator
JCP98_RS12255	COG2972	Histidine kinase
JCP98_RS12265	COG1653	transport
JCP98_RS12270	COG0395	ABC-type sugar transport system, permease component
JCP98_RS12275	COG1175	transmembrane transport
JCP98_RS12280	COG1187	pseudouridine synthase activity
JCP98_RS12285	COG2244	polysaccharide biosynthetic process
JCP98_RS12295	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JCP98_RS12300	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS12315	COG3711	transcriptional antiterminator
JCP98_RS12315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS12360	COG0789	Transcriptional regulator
JCP98_RS12360	COG4978	Transcriptional regulator
JCP98_RS12370	COG1132	(ABC) transporter
JCP98_RS12380	COG0495	leucyl-tRNA aminoacylation
JCP98_RS12385	COG1388	LysM domain
JCP98_RS12385	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS12390	COG0671	phosphoesterase, PA-phosphatase related
JCP98_RS12395	COG1242	4 iron, 4 sulfur cluster binding
JCP98_RS12400	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JCP98_RS12445	COG0582	viral genome integration into host DNA
JCP98_RS12450	COG3328	transposase activity
JCP98_RS12465	COG1132	(ABC) transporter
JCP98_RS12470	COG1132	(ABC) transporter
JCP98_RS12485	COG0477	Major facilitator Superfamily
JCP98_RS12490	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JCP98_RS12645	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JCP98_RS12650	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JCP98_RS12655	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JCP98_RS12665	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JCP98_RS12670	COG0037	tRNA processing
JCP98_RS12675	COG1098	S1 RNA binding domain
JCP98_RS12685	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JCP98_RS12690	COG2244	polysaccharide biosynthetic process
JCP98_RS12695	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JCP98_RS12700	COG0193	aminoacyl-tRNA hydrolase activity
JCP98_RS12705	COG0039	L-malate dehydrogenase activity
JCP98_RS12715	COG0217	transcriptional regulatory protein
JCP98_RS12740	COG1792	Involved in formation and maintenance of cell shape
JCP98_RS12750	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JCP98_RS12755	COG1162	GTPase activity
JCP98_RS12760	COG0515	serine threonine protein kinase
JCP98_RS12760	COG2815	serine threonine protein kinase
JCP98_RS12765	COG0631	protein serine/threonine phosphatase activity
JCP98_RS12770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JCP98_RS12770	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JCP98_RS12775	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JCP98_RS12780	COG0242	peptide deformylase activity
JCP98_RS12785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JCP98_RS12790	COG1758	RNA polymerase activity
JCP98_RS12795	COG0194	GDP metabolic process
JCP98_RS12805	COG1561	YicC-like family, N-terminal region
JCP98_RS12815	COG1752	Esterase of the alpha-beta hydrolase superfamily
JCP98_RS12830	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JCP98_RS12835	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JCP98_RS12840	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JCP98_RS12845	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JCP98_RS12850	COG1121	(ABC) transporter
JCP98_RS12855	COG0803	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS12855	COG3443	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS12860	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JCP98_RS12865	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JCP98_RS12865	COG0392	lysyltransferase activity
JCP98_RS12870	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JCP98_RS12880	COG1418	mRNA catabolic process
JCP98_RS12885	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JCP98_RS12890	COG1058	Belongs to the CinA family
JCP98_RS12890	COG1546	Belongs to the CinA family
JCP98_RS12895	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JCP98_RS12900	COG1426	Protein conserved in bacteria
JCP98_RS12905	COG0612	Peptidase, M16
JCP98_RS12910	COG0612	Peptidase, M16
JCP98_RS12915	COG1970	mechanosensitive ion channel activity
JCP98_RS12920	COG2153	protein acetylation
JCP98_RS12925	COG4466	Protein conserved in bacteria
JCP98_RS12935	COG3688	RNA-binding protein containing a PIN domain
JCP98_RS12940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JCP98_RS12945	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JCP98_RS12950	COG0215	cysteine-tRNA ligase activity
JCP98_RS12955	COG1045	serine acetyltransferase
JCP98_RS12960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JCP98_RS12965	COG4956	integral membrane protein (PIN domain superfamily)
JCP98_RS12975	COG0756	dUTP diphosphatase activity
JCP98_RS12985	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JCP98_RS12990	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JCP98_RS13005	COG2814	Major facilitator Superfamily
JCP98_RS13025	COG0778	Nitroreductase
JCP98_RS13035	COG1388	LysM domain
JCP98_RS13035	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS13040	COG4221	oxidoreductase activity
JCP98_RS13050	COG0583	DNA-binding transcription factor activity
JCP98_RS13055	COG3711	transcriptional antiterminator
JCP98_RS13060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS13060	COG2190	(PTS) system
JCP98_RS13060	COG1263	PTS System
JCP98_RS13065	COG0702	epimerase
JCP98_RS13080	COG3708	Transcriptional regulator
JCP98_RS13080	COG2207	Transcriptional regulator
JCP98_RS13100	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
JCP98_RS13110	COG0604	alcohol dehydrogenase
JCP98_RS13115	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JCP98_RS13120	COG0842	Transport permease protein
JCP98_RS13125	COG1131	(ABC) transporter
JCP98_RS13135	COG2205	protein histidine kinase activity
JCP98_RS13140	COG0745	RESPONSE REGULATOR receiver
JCP98_RS13180	COG2188	Transcriptional regulator
JCP98_RS13185	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS13190	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS13195	COG3715	PTS system
JCP98_RS13205	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JCP98_RS13210	COG2222	sugar isomerase
JCP98_RS13320	COG1674	ftsk spoiiie
JCP98_RS13345	COG2946	Replication initiation factor
JCP98_RS13385	COG0741	lytic transglycosylase activity
JCP98_RS13385	COG0791	NLP P60 protein
JCP98_RS13410	COG2814	Major facilitator Superfamily
JCP98_RS13420	COG3942	CHAP domain
JCP98_RS13420	COG1705	Flagellar rod assembly protein muramidase FlgJ
JCP98_RS13425	COG0446	pyridine nucleotide-disulphide oxidoreductase
JCP98_RS13440	COG2207	Transcriptional regulator
JCP98_RS13440	COG3708	Transcriptional regulator
JCP98_RS13475	COG0523	cobalamin synthesis protein
JCP98_RS13495	COG0803	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS13495	COG3443	Belongs to the bacterial solute-binding protein 9 family
JCP98_RS13510	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JCP98_RS13520	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JCP98_RS13525	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JCP98_RS13530	COG1132	(ABC) transporter
JCP98_RS13535	COG1132	(ABC) transporter
JCP98_RS13545	COG1129	ABC transporter
JCP98_RS13555	COG1309	transcriptional regulator
JCP98_RS13590	COG4974	Belongs to the 'phage' integrase family
JCP98_RS13595	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JCP98_RS13600	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JCP98_RS13605	COG0783	Belongs to the Dps family
JCP98_RS13610	COG1070	Carbohydrate kinase
JCP98_RS13615	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JCP98_RS13620	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JCP98_RS13625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS13635	COG1554	hydrolase, family 65, central catalytic
JCP98_RS13640	COG0673	inositol 2-dehydrogenase activity
JCP98_RS13645	COG1082	Xylose isomerase domain protein TIM barrel
JCP98_RS13650	COG1063	alcohol dehydrogenase
JCP98_RS13655	COG0395	ABC-type sugar transport system, permease component
JCP98_RS13660	COG1175	transmembrane transport
JCP98_RS13665	COG1653	transport
JCP98_RS13670	COG0366	Alpha amylase catalytic
JCP98_RS13675	COG1609	Transcriptional regulator
JCP98_RS13680	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JCP98_RS13685	COG0085	RNA polymerase activity
JCP98_RS13695	COG4120	Belongs to the binding-protein-dependent transport system permease family
JCP98_RS13705	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
JCP98_RS13705	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
JCP98_RS13720	COG0142	geranyltranstransferase activity
JCP98_RS13740	COG4939	FMN-binding domain protein
JCP98_RS13755	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JCP98_RS13760	COG0826	peptidase U32
JCP98_RS13765	COG0826	peptidase U32
JCP98_RS13770	COG0542	response to heat
JCP98_RS13775	COG4463	regulation of RNA biosynthetic process
JCP98_RS13850	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JCP98_RS13855	COG0517	IMP dehydrogenase activity
JCP98_RS13855	COG0516	GMP reductase activity
JCP98_RS13865	COG0012	GTP binding
JCP98_RS13870	COG4481	Protein conserved in bacteria
JCP98_RS13875	COG1475	DNA binding
JCP98_RS13880	COG1192	Involved in chromosome partitioning
JCP98_RS13885	COG0357	Ribosomal RNA small subunit methyltransferase G
JCP98_RS13890	COG0445	tRNA wobble uridine modification
JCP98_RS13895	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JCP98_RS13905	COG1847	R3H domain protein
JCP98_RS13910	COG0706	membrane insertase activity
JCP98_RS13915	COG0594	ribonuclease P activity
JCP98_RS13920	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JCP98_RS13935	COG2337	Toxic component of a toxin-antitoxin (TA) module
JCP98_RS14020	COG0629	single-stranded DNA binding
JCP98_RS14025	COG0629	single-stranded DNA binding
JCP98_RS14085	COG3328	transposase activity
JCP98_RS14100	COG3775	system Galactitol-specific IIC component
JCP98_RS14115	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JCP98_RS14125	COG4372	Transposase
JCP98_RS14160	COG1940	carbohydrate kinase activity
JCP98_RS14165	COG1263	PTS System
JCP98_RS14165	COG2190	(PTS) system
JCP98_RS14165	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS14170	COG1621	beta-fructofuranosidase activity
JCP98_RS14175	COG1609	Transcriptional regulator
JCP98_RS14205	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JCP98_RS14210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS14210	COG2190	(PTS) system
JCP98_RS14210	COG1263	PTS System
JCP98_RS14215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS14215	COG2190	(PTS) system
JCP98_RS14215	COG1263	PTS System
JCP98_RS14235	COG4974	Belongs to the 'phage' integrase family
JCP98_RS14245	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JCP98_RS14255	COG3684	Belongs to the aldolase LacD family
JCP98_RS14260	COG2222	sugar isomerase
JCP98_RS14265	COG2188	Transcriptional regulator
JCP98_RS14280	COG3328	transposase activity
JCP98_RS14295	COG3328	transposase activity
JCP98_RS14355	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JCP98_RS14370	COG3409	Peptidoglycan-binding domain 1 protein
JCP98_RS14390	COG5002	protein histidine kinase activity
JCP98_RS14405	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JCP98_RS14420	COG3842	ATPase activity
JCP98_RS14430	COG0395	ABC-type sugar transport system, permease component
JCP98_RS14445	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JCP98_RS14465	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JCP98_RS14480	COG1136	(ABC) transporter
JCP98_RS14500	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JCP98_RS14535	COG0582	viral genome integration into host DNA
JCP98_RS14560	COG2217	Heavy metal translocating P-type atpase
JCP98_RS14580	COG2217	Heavy metal translocating P-type atpase
JCP98_RS14585	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JCP98_RS14595	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JCP98_RS14605	COG3711	transcriptional antiterminator
JCP98_RS14610	COG2723	6-phospho-beta-galactosidase activity
JCP98_RS14615	COG2190	(PTS) system
JCP98_RS14615	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JCP98_RS14615	COG1263	PTS System
JCP98_RS14620	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCP98_RS14620	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JCP98_RS14665	COG1288	antiporter activity
JCP98_RS14685	COG2188	Transcriptional regulator
JCP98_RS14690	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JCP98_RS14695	COG2222	sugar isomerase
JCP98_RS14720	COG3711	transcriptional antiterminator
JCP98_RS14725	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JCP98_RS14730	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JCP98_RS14730	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JCP98_RS14735	COG2222	sugar isomerase
JCP98_RS14740	COG3716	PTS system mannose fructose sorbose family IID component
JCP98_RS14745	COG3715	PTS system
JCP98_RS14900	COG3344	reverse transcriptase
JCP98_RS14945	COG2226	methyltransferase
JCP98_RS14955	COG0456	acetyltransferase
JCP98_RS14970	COG2378	regulation of single-species biofilm formation
JCP98_RS15075	COG2826	transposase and inactivated derivatives, IS30 family
JCP98_RS15115	COG4115	mRNA cleavage
JCP98_RS15130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JCP98_RS15150	COG1192	Involved in chromosome partitioning
JCP98_RS15245	COG0629	single-stranded DNA binding
JCP98_RS15295	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JCP98_RS15305	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JCP98_RS15325	COG1192	Involved in chromosome partitioning
JCP98_RS15450	COG3344	reverse transcriptase