locus-tag class description JCQ04_RS00005 PF00308 Bacterial dnaA protein JCQ04_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JCQ04_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JCQ04_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JCQ04_RS00010 PF02767 DNA polymerase III beta subunit, central domain JCQ04_RS00020 PF02463 RecF/RecN/SMC N terminal domain JCQ04_RS00025 PF01751 Toprim domain JCQ04_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS00025 PF00204 DNA gyrase B JCQ04_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JCQ04_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JCQ04_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JCQ04_RS00035 PF01250 Ribosomal protein S6 JCQ04_RS00040 PF00436 Single-strand binding protein family JCQ04_RS00045 PF01084 Ribosomal protein S18 JCQ04_RS00050 PF01610 Transposase JCQ04_RS00050 PF13683 Integrase core domain JCQ04_RS00055 PF01368 DHH family JCQ04_RS00055 PF02272 DHHA1 domain JCQ04_RS00060 PF03948 Ribosomal protein L9, C-terminal domain JCQ04_RS00060 PF01281 Ribosomal protein L9, N-terminal domain JCQ04_RS00065 PF00772 DnaB-like helicase N terminal domain JCQ04_RS00065 PF03796 DnaB-like helicase C terminal domain JCQ04_RS00070 PF00709 Adenylosuccinate synthetase JCQ04_RS00075 PF02645 Uncharacterised protein, DegV family COG1307 JCQ04_RS00080 PF12848 ABC transporter JCQ04_RS00080 PF00005 ABC transporter JCQ04_RS00090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCQ04_RS00090 PF00205 Thiamine pyrophosphate enzyme, central domain JCQ04_RS00090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCQ04_RS00095 PF02535 ZIP Zinc transporter JCQ04_RS00105 PF06736 Protein of unknown function (DUF1211) JCQ04_RS00115 PF04892 VanZ like family JCQ04_RS00135 PF00872 Transposase, Mutator family JCQ04_RS00160 PF00455 DeoR C terminal sensor domain JCQ04_RS00160 PF08220 DeoR-like helix-turn-helix domain JCQ04_RS00165 PF00232 Glycosyl hydrolase family 1 JCQ04_RS00170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCQ04_RS00175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS00175 PF02378 Phosphotransferase system, EIIC JCQ04_RS00180 PF07745 Glycosyl hydrolase family 53 JCQ04_RS00185 PF00872 Transposase, Mutator family JCQ04_RS00190 PF02463 RecF/RecN/SMC N terminal domain JCQ04_RS00195 PF00580 UvrD/REP helicase N-terminal domain JCQ04_RS00195 PF13361 UvrD-like helicase C-terminal domain JCQ04_RS00220 PF02486 Replication initiation factor JCQ04_RS00220 PF18106 Rolling Circle replication initiation protein N-terminal domain JCQ04_RS00265 PF00877 NlpC/P60 family JCQ04_RS00280 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS00280 PF14492 Elongation Factor G, domain II JCQ04_RS00280 PF03764 Elongation factor G, domain IV JCQ04_RS00280 PF00679 Elongation factor G C-terminus JCQ04_RS00310 PF00589 Phage integrase family JCQ04_RS00310 PF14659 Phage integrase, N-terminal SAM-like domain JCQ04_RS00315 PF02540 NAD synthase JCQ04_RS00315 PF00958 GMP synthase C terminal domain JCQ04_RS00315 PF00117 Glutamine amidotransferase class-I JCQ04_RS00320 PF00485 Phosphoribulokinase / Uridine kinase family JCQ04_RS00325 PF05175 Methyltransferase small domain JCQ04_RS00330 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS00335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JCQ04_RS00335 PF02885 Glycosyl transferase family, helical bundle domain JCQ04_RS00335 PF00591 Glycosyl transferase family, a/b domain JCQ04_RS00340 PF01791 DeoC/LacD family aldolase JCQ04_RS00345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCQ04_RS00350 PF02608 ABC transporter substrate-binding protein PnrA-like JCQ04_RS00355 PF00005 ABC transporter JCQ04_RS00360 PF02653 Branched-chain amino acid transport system / permease component JCQ04_RS00365 PF02653 Branched-chain amino acid transport system / permease component JCQ04_RS00370 PF01676 Metalloenzyme superfamily JCQ04_RS00375 PF01048 Phosphorylase superfamily JCQ04_RS00380 PF01048 Phosphorylase superfamily JCQ04_RS00385 PF00300 Histidine phosphatase superfamily (branch 1) JCQ04_RS00390 PF00239 Resolvase, N terminal domain JCQ04_RS00390 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS00395 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCQ04_RS00400 PF00164 Ribosomal protein S12/S23 JCQ04_RS00405 PF00177 Ribosomal protein S7p/S5e JCQ04_RS00410 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS00410 PF00679 Elongation factor G C-terminus JCQ04_RS00410 PF14492 Elongation Factor G, domain II JCQ04_RS00410 PF03764 Elongation factor G, domain IV JCQ04_RS00410 PF03144 Elongation factor Tu domain 2 JCQ04_RS00415 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS00415 PF03144 Elongation factor Tu domain 2 JCQ04_RS00415 PF03143 Elongation factor Tu C-terminal domain JCQ04_RS00420 PF00338 Ribosomal protein S10p/S20e JCQ04_RS00425 PF00297 Ribosomal protein L3 JCQ04_RS00430 PF00573 Ribosomal protein L4/L1 family JCQ04_RS00435 PF00276 Ribosomal protein L23 JCQ04_RS00440 PF00181 Ribosomal Proteins L2, RNA binding domain JCQ04_RS00440 PF03947 Ribosomal Proteins L2, C-terminal domain JCQ04_RS00445 PF00203 Ribosomal protein S19 JCQ04_RS00450 PF00237 Ribosomal protein L22p/L17e JCQ04_RS00455 PF00189 Ribosomal protein S3, C-terminal domain JCQ04_RS00455 PF07650 KH domain JCQ04_RS00460 PF00252 Ribosomal protein L16p/L10e JCQ04_RS00465 PF00831 Ribosomal L29 protein JCQ04_RS00470 PF00366 Ribosomal protein S17 JCQ04_RS00475 PF00238 Ribosomal protein L14p/L23e JCQ04_RS00480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCQ04_RS00480 PF00467 KOW motif JCQ04_RS00485 PF00673 ribosomal L5P family C-terminus JCQ04_RS00485 PF00281 Ribosomal protein L5 JCQ04_RS00490 PF00253 Ribosomal protein S14p/S29e JCQ04_RS00495 PF00410 Ribosomal protein S8 JCQ04_RS00500 PF00347 Ribosomal protein L6 JCQ04_RS00505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCQ04_RS00510 PF03719 Ribosomal protein S5, C-terminal domain JCQ04_RS00510 PF00333 Ribosomal protein S5, N-terminal domain JCQ04_RS00515 PF00327 Ribosomal protein L30p/L7e JCQ04_RS00520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCQ04_RS00525 PF00344 SecY translocase JCQ04_RS00530 PF05191 Adenylate kinase, active site lid JCQ04_RS00535 PF01176 Translation initiation factor 1A / IF-1 JCQ04_RS00540 PF00444 Ribosomal protein L36 JCQ04_RS00545 PF00416 Ribosomal protein S13/S18 JCQ04_RS00550 PF00411 Ribosomal protein S11 JCQ04_RS00555 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCQ04_RS00555 PF01000 RNA polymerase Rpb3/RpoA insert domain JCQ04_RS00555 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCQ04_RS00560 PF01196 Ribosomal protein L17 JCQ04_RS00565 PF00005 ABC transporter JCQ04_RS00570 PF00005 ABC transporter JCQ04_RS00575 PF02361 Cobalt transport protein JCQ04_RS00580 PF01416 tRNA pseudouridine synthase JCQ04_RS00590 PF00830 Ribosomal L28 family JCQ04_RS00595 PF03780 Asp23 family, cell envelope-related function JCQ04_RS00600 PF13684 Dihydroxyacetone kinase family JCQ04_RS00600 PF02734 DAK2 domain JCQ04_RS00605 PF00270 DEAD/DEAH box helicase JCQ04_RS00605 PF17191 RecG wedge domain JCQ04_RS00605 PF00271 Helicase conserved C-terminal domain JCQ04_RS00610 PF02504 Fatty acid synthesis protein JCQ04_RS00615 PF00550 Phosphopantetheine attachment site JCQ04_RS00620 PF00005 ABC transporter JCQ04_RS00620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCQ04_RS00625 PF00005 ABC transporter JCQ04_RS00625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCQ04_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS00640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCQ04_RS00645 PF00035 Double-stranded RNA binding motif JCQ04_RS00645 PF14622 Ribonuclease-III-like JCQ04_RS00650 PF02463 RecF/RecN/SMC N terminal domain JCQ04_RS00650 PF06470 SMC proteins Flexible Hinge Domain JCQ04_RS00660 PF00448 SRP54-type protein, GTPase domain JCQ04_RS00660 PF02881 SRP54-type protein, helical bundle domain JCQ04_RS00665 PF04262 Glutamate-cysteine ligase JCQ04_RS00665 PF18419 ATP-grasp-like domain JCQ04_RS00665 PF02655 ATP-grasp domain JCQ04_RS00675 PF01032 FecCD transport family JCQ04_RS00680 PF01032 FecCD transport family JCQ04_RS00685 PF00005 ABC transporter JCQ04_RS00690 PF01497 Periplasmic binding protein JCQ04_RS00715 PF06458 MucBP domain JCQ04_RS00730 PF00872 Transposase, Mutator family JCQ04_RS00745 PF00230 Major intrinsic protein JCQ04_RS00750 PF03788 LrgA family JCQ04_RS00755 PF04172 LrgB-like family JCQ04_RS00765 PF04172 LrgB-like family JCQ04_RS00790 PF02632 BioY family JCQ04_RS00795 PF00163 Ribosomal protein S4/S9 N-terminal domain JCQ04_RS00795 PF01479 S4 domain JCQ04_RS00815 PF13277 YmdB-like protein JCQ04_RS00825 PF05188 MutS domain II JCQ04_RS00825 PF00488 MutS domain V JCQ04_RS00825 PF05190 MutS family domain IV JCQ04_RS00825 PF05192 MutS domain III JCQ04_RS00825 PF01624 MutS domain I JCQ04_RS00830 PF01119 DNA mismatch repair protein, C-terminal domain JCQ04_RS00830 PF08676 MutL C terminal dimerisation domain JCQ04_RS00835 PF02545 Maf-like protein JCQ04_RS00840 PF00367 phosphotransferase system, EIIB JCQ04_RS00840 PF02378 Phosphotransferase system, EIIC JCQ04_RS00845 PF07702 UTRA domain JCQ04_RS00845 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS00850 PF01641 SelR domain JCQ04_RS00855 PF01330 RuvA N terminal domain JCQ04_RS00855 PF07499 RuvA, C-terminal domain JCQ04_RS00860 PF17864 RuvB AAA lid domain JCQ04_RS00860 PF05491 RuvB C-terminal winged helix domain JCQ04_RS00860 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCQ04_RS00870 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCQ04_RS00880 PF00872 Transposase, Mutator family JCQ04_RS00885 PF05525 Branched-chain amino acid transport protein JCQ04_RS00890 PF06736 Protein of unknown function (DUF1211) JCQ04_RS00895 PF00324 Amino acid permease JCQ04_RS00900 PF00005 ABC transporter JCQ04_RS00905 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS00915 PF02146 Sir2 family JCQ04_RS00920 PF14602 Hexapeptide repeat of succinyl-transferase JCQ04_RS00920 PF12464 Maltose acetyltransferase JCQ04_RS00925 PF02829 3H domain JCQ04_RS00925 PF08279 HTH domain JCQ04_RS00930 PF01327 Polypeptide deformylase JCQ04_RS00935 PF00312 Ribosomal protein S15 JCQ04_RS00940 PF00013 KH domain JCQ04_RS00940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCQ04_RS00940 PF01138 3' exoribonuclease family, domain 1 JCQ04_RS00940 PF03725 3' exoribonuclease family, domain 2 JCQ04_RS00940 PF00575 S1 RNA binding domain JCQ04_RS00950 PF02705 K+ potassium transporter JCQ04_RS00955 PF03471 Transporter associated domain JCQ04_RS00955 PF00571 CBS domain JCQ04_RS00955 PF01595 Cyclin M transmembrane N-terminal domain JCQ04_RS00960 PF01554 MatE JCQ04_RS00970 PF14693 Ribosomal protein TL5, C-terminal domain JCQ04_RS00970 PF01386 Ribosomal L25p family JCQ04_RS00975 PF01479 S4 domain JCQ04_RS00975 PF00849 RNA pseudouridylate synthase JCQ04_RS00980 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS00985 PF00485 Phosphoribulokinase / Uridine kinase family JCQ04_RS01010 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCQ04_RS01015 PF03109 ABC1 family JCQ04_RS01020 PF01820 D-ala D-ala ligase N-terminus JCQ04_RS01020 PF07478 D-ala D-ala ligase C-terminus JCQ04_RS01025 PF01225 Mur ligase family, catalytic domain JCQ04_RS01025 PF08245 Mur ligase middle domain JCQ04_RS01025 PF02875 Mur ligase family, glutamate ligase domain JCQ04_RS01030 PF00271 Helicase conserved C-terminal domain JCQ04_RS01030 PF00270 DEAD/DEAH box helicase JCQ04_RS01035 PF01648 4'-phosphopantetheinyl transferase superfamily JCQ04_RS01040 PF01168 Alanine racemase, N-terminal domain JCQ04_RS01040 PF00842 Alanine racemase, C-terminal domain JCQ04_RS01045 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCQ04_RS01050 PF00253 Ribosomal protein S14p/S29e JCQ04_RS01055 PF14765 Polyketide synthase dehydratase JCQ04_RS01055 PF02801 Beta-ketoacyl synthase, C-terminal domain JCQ04_RS01055 PF00109 Beta-ketoacyl synthase, N-terminal domain JCQ04_RS01055 PF08240 Alcohol dehydrogenase GroES-like domain JCQ04_RS01055 PF08659 KR domain JCQ04_RS01055 PF16197 Ketoacyl-synthetase C-terminal extension JCQ04_RS01055 PF00550 Phosphopantetheine attachment site JCQ04_RS01055 PF00698 Acyl transferase domain JCQ04_RS01060 PF01061 ABC-2 type transporter JCQ04_RS01065 PF13520 Amino acid permease JCQ04_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS01095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCQ04_RS01100 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS01105 PF00005 ABC transporter JCQ04_RS01105 PF00571 CBS domain JCQ04_RS01110 PF02547 Queuosine biosynthesis protein JCQ04_RS01115 PF00689 Cation transporting ATPase, C-terminus JCQ04_RS01115 PF00690 Cation transporter/ATPase, N-terminus JCQ04_RS01125 PF01702 Queuine tRNA-ribosyltransferase JCQ04_RS01130 PF02699 Preprotein translocase subunit JCQ04_RS01135 PF00465 Iron-containing alcohol dehydrogenase JCQ04_RS01135 PF00171 Aldehyde dehydrogenase family JCQ04_RS01145 PF07470 Glycosyl Hydrolase Family 88 JCQ04_RS01150 PF03480 Bacterial extracellular solute-binding protein, family 7 JCQ04_RS01160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCQ04_RS01175 PF12833 Helix-turn-helix domain JCQ04_RS01175 PF02311 AraC-like ligand binding domain JCQ04_RS01180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCQ04_RS01180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCQ04_RS01185 PF06134 L-rhamnose isomerase (RhaA) JCQ04_RS01190 PF00596 Class II Aldolase and Adducin N-terminal domain JCQ04_RS01195 PF05336 L-rhamnose mutarotase JCQ04_RS01200 PF00465 Iron-containing alcohol dehydrogenase JCQ04_RS01205 PF09339 IclR helix-turn-helix domain JCQ04_RS01205 PF01614 Bacterial transcriptional regulator JCQ04_RS01210 PF01081 KDPG and KHG aldolase JCQ04_RS01220 PF04962 KduI/IolB family JCQ04_RS01230 PF01070 FMN-dependent dehydrogenase JCQ04_RS01235 PF08544 GHMP kinases C terminal JCQ04_RS01235 PF00288 GHMP kinases N terminal domain JCQ04_RS01245 PF08544 GHMP kinases C terminal JCQ04_RS01245 PF00288 GHMP kinases N terminal domain JCQ04_RS01245 PF10509 Galactokinase galactose-binding signature JCQ04_RS01250 PF01712 Deoxynucleoside kinase JCQ04_RS01265 PF00872 Transposase, Mutator family JCQ04_RS01270 PF05198 Translation initiation factor IF-3, N-terminal domain JCQ04_RS01270 PF00707 Translation initiation factor IF-3, C-terminal domain JCQ04_RS01275 PF01632 Ribosomal protein L35 JCQ04_RS01280 PF00453 Ribosomal protein L20 JCQ04_RS01290 PF01968 Hydantoinase/oxoprolinase JCQ04_RS01290 PF05378 Hydantoinase/oxoprolinase N-terminal region JCQ04_RS01310 PF03061 Thioesterase superfamily JCQ04_RS01315 PF01256 Carbohydrate kinase JCQ04_RS01320 PF01546 Peptidase family M20/M25/M40 JCQ04_RS01325 PF00535 Glycosyl transferase family 2 JCQ04_RS01335 PF05343 M42 glutamyl aminopeptidase JCQ04_RS01340 PF00085 Thioredoxin JCQ04_RS01345 PF00582 Universal stress protein family JCQ04_RS01350 PF14794 Domain of unknown function (DUF4479) JCQ04_RS01350 PF01588 Putative tRNA binding domain JCQ04_RS01355 PF13180 PDZ domain JCQ04_RS01360 PF02590 Predicted SPOUT methyltransferase JCQ04_RS01365 PF07308 Protein of unknown function (DUF1456) JCQ04_RS01375 PF02558 Ketopantoate reductase PanE/ApbA JCQ04_RS01375 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCQ04_RS01390 PF01625 Peptide methionine sulfoxide reductase JCQ04_RS01400 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS01425 PF00872 Transposase, Mutator family JCQ04_RS01455 PF00884 Sulfatase JCQ04_RS01465 PF00375 Sodium:dicarboxylate symporter family JCQ04_RS01475 PF01416 tRNA pseudouridine synthase JCQ04_RS01490 PF00872 Transposase, Mutator family JCQ04_RS01505 PF01625 Peptide methionine sulfoxide reductase JCQ04_RS01510 PF00248 Aldo/keto reductase family JCQ04_RS01515 PF07729 FCD domain JCQ04_RS01515 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS01520 PF02378 Phosphotransferase system, EIIC JCQ04_RS01525 PF00232 Glycosyl hydrolase family 1 JCQ04_RS01530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS01535 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCQ04_RS01555 PF00107 Zinc-binding dehydrogenase JCQ04_RS01555 PF13823 Alcohol dehydrogenase GroES-associated JCQ04_RS01555 PF08240 Alcohol dehydrogenase GroES-like domain JCQ04_RS01565 PF06100 MCRA family JCQ04_RS01595 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCQ04_RS01605 PF00324 Amino acid permease JCQ04_RS01610 PF00689 Cation transporting ATPase, C-terminus JCQ04_RS01610 PF00690 Cation transporter/ATPase, N-terminus JCQ04_RS01625 PF03466 LysR substrate binding domain JCQ04_RS01625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS01630 PF00698 Acyl transferase domain JCQ04_RS01635 PF16957 Malonate decarboxylase, alpha subunit, transporter JCQ04_RS01640 PF06857 Malonate decarboxylase delta subunit (MdcD) JCQ04_RS01645 PF01039 Carboxyl transferase domain JCQ04_RS01650 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCQ04_RS01660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCQ04_RS01670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS01680 PF03611 PTS system sugar-specific permease component JCQ04_RS01690 PF01116 Fructose-bisphosphate aldolase class-II JCQ04_RS01700 PF00293 NUDIX domain JCQ04_RS01705 PF01047 MarR family JCQ04_RS01710 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS01730 PF00860 Permease family JCQ04_RS01735 PF16657 Maltogenic Amylase, C-terminal domain JCQ04_RS01735 PF00128 Alpha amylase, catalytic domain JCQ04_RS01740 PF00232 Glycosyl hydrolase family 1 JCQ04_RS01750 PF00367 phosphotransferase system, EIIB JCQ04_RS01750 PF02378 Phosphotransferase system, EIIC JCQ04_RS01750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS01755 PF00232 Glycosyl hydrolase family 1 JCQ04_RS01765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCQ04_RS01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS01775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS01785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCQ04_RS01785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCQ04_RS01790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCQ04_RS01790 PF01266 FAD dependent oxidoreductase JCQ04_RS01795 PF00230 Major intrinsic protein JCQ04_RS01805 PF01066 CDP-alcohol phosphatidyltransferase JCQ04_RS01815 PF02583 Metal-sensitive transcriptional repressor JCQ04_RS01820 PF00581 Rhodanese-like domain JCQ04_RS01825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS01825 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS01830 PF13538 UvrD-like helicase C-terminal domain JCQ04_RS01840 PF00535 Glycosyl transferase family 2 JCQ04_RS01850 PF01906 Putative heavy-metal-binding JCQ04_RS01855 PF03610 PTS system fructose IIA component JCQ04_RS01860 PF02733 Dak1 domain JCQ04_RS01865 PF02734 DAK2 domain JCQ04_RS01870 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) JCQ04_RS01875 PF13545 Crp-like helix-turn-helix domain JCQ04_RS01875 PF00027 Cyclic nucleotide-binding domain JCQ04_RS01885 PF13732 Domain of unknown function (DUF4162) JCQ04_RS01885 PF00005 ABC transporter JCQ04_RS01890 PF00440 Bacterial regulatory proteins, tetR family JCQ04_RS01890 PF16859 Tetracyclin repressor-like, C-terminal domain JCQ04_RS01900 PF00579 tRNA synthetases class I (W and Y) JCQ04_RS01900 PF01479 S4 domain JCQ04_RS01905 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCQ04_RS01910 PF13520 Amino acid permease JCQ04_RS01920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCQ04_RS01920 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS01930 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS01935 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCQ04_RS01935 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCQ04_RS01935 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCQ04_RS01940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS01940 PF02378 Phosphotransferase system, EIIC JCQ04_RS01940 PF00367 phosphotransferase system, EIIB JCQ04_RS01945 PF03372 Endonuclease/Exonuclease/phosphatase family JCQ04_RS01965 PF05870 Phenolic acid decarboxylase (PAD) JCQ04_RS01970 PF03551 Transcriptional regulator PadR-like family JCQ04_RS01970 PF10400 Virulence activator alpha C-term JCQ04_RS01980 PF07690 Major Facilitator Superfamily JCQ04_RS02000 PF02441 Flavoprotein JCQ04_RS02005 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCQ04_RS02015 PF02687 FtsX-like permease family JCQ04_RS02015 PF12704 MacB-like periplasmic core domain JCQ04_RS02015 PF00005 ABC transporter JCQ04_RS02020 PF00072 Response regulator receiver domain JCQ04_RS02020 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS02025 PF00072 Response regulator receiver domain JCQ04_RS02025 PF09308 LuxQ, periplasmic JCQ04_RS02025 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS02030 PF03466 LysR substrate binding domain JCQ04_RS02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS02035 PF04474 Protein of unknown function (DUF554) JCQ04_RS02070 PF00005 ABC transporter JCQ04_RS02080 PF01263 Aldose 1-epimerase JCQ04_RS02085 PF05257 CHAP domain JCQ04_RS02085 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS02090 PF00367 phosphotransferase system, EIIB JCQ04_RS02090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS02090 PF02378 Phosphotransferase system, EIIC JCQ04_RS02095 PF05025 RbsD / FucU transport protein family JCQ04_RS02100 PF00294 pfkB family carbohydrate kinase JCQ04_RS02100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCQ04_RS02105 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS02110 PF00857 Isochorismatase family JCQ04_RS02115 PF00005 ABC transporter JCQ04_RS02125 PF16657 Maltogenic Amylase, C-terminal domain JCQ04_RS02125 PF00128 Alpha amylase, catalytic domain JCQ04_RS02130 PF01594 AI-2E family transporter JCQ04_RS02135 PF01297 Zinc-uptake complex component A periplasmic JCQ04_RS02135 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCQ04_RS02140 PF04397 LytTr DNA-binding domain JCQ04_RS02140 PF00072 Response regulator receiver domain JCQ04_RS02150 PF04647 Accessory gene regulator B JCQ04_RS02160 PF01712 Deoxynucleoside kinase JCQ04_RS02170 PF13361 UvrD-like helicase C-terminal domain JCQ04_RS02170 PF00580 UvrD/REP helicase N-terminal domain JCQ04_RS02180 PF03960 ArsC family JCQ04_RS02185 PF03960 ArsC family JCQ04_RS02190 PF13276 HTH-like domain JCQ04_RS02190 PF13333 Integrase core domain JCQ04_RS02190 PF00665 Integrase core domain JCQ04_RS02215 PF00255 Glutathione peroxidase JCQ04_RS02220 PF02664 S-Ribosylhomocysteinase (LuxS) JCQ04_RS02225 PF01053 Cys/Met metabolism PLP-dependent enzyme JCQ04_RS02235 PF00291 Pyridoxal-phosphate dependent enzyme JCQ04_RS02240 PF09285 Elongation factor P, C-terminal JCQ04_RS02240 PF08207 Elongation factor P (EF-P) KOW-like domain JCQ04_RS02240 PF01132 Elongation factor P (EF-P) OB domain JCQ04_RS02250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCQ04_RS02250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCQ04_RS02255 PF01678 Diaminopimelate epimerase JCQ04_RS02260 PF00701 Dihydrodipicolinate synthetase family JCQ04_RS02265 PF05173 Dihydrodipicolinate reductase, C-terminus JCQ04_RS02265 PF01113 Dihydrodipicolinate reductase, N-terminus JCQ04_RS02270 PF14602 Hexapeptide repeat of succinyl-transferase JCQ04_RS02270 PF00132 Bacterial transferase hexapeptide (six repeats) JCQ04_RS02270 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JCQ04_RS02275 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCQ04_RS02275 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCQ04_RS02280 PF00696 Amino acid kinase family JCQ04_RS02280 PF13840 ACT domain JCQ04_RS02285 PF01546 Peptidase family M20/M25/M40 JCQ04_RS02285 PF07687 Peptidase dimerisation domain JCQ04_RS02290 PF00155 Aminotransferase class I and II JCQ04_RS02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS02295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS02315 PF11798 IMS family HHH motif JCQ04_RS02315 PF11799 impB/mucB/samB family C-terminal domain JCQ04_RS02315 PF00817 impB/mucB/samB family JCQ04_RS02320 PF08544 GHMP kinases C terminal JCQ04_RS02320 PF10509 Galactokinase galactose-binding signature JCQ04_RS02320 PF00288 GHMP kinases N terminal domain JCQ04_RS02325 PF01263 Aldose 1-epimerase JCQ04_RS02330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS02335 PF12833 Helix-turn-helix domain JCQ04_RS02335 PF02311 AraC-like ligand binding domain JCQ04_RS02340 PF02525 Flavodoxin-like fold JCQ04_RS02355 PF00324 Amino acid permease JCQ04_RS02360 PF00005 ABC transporter JCQ04_RS02365 PF00950 ABC 3 transport family JCQ04_RS02370 PF01297 Zinc-uptake complex component A periplasmic JCQ04_RS02380 PF08331 Domain of unknown function (DUF1730) JCQ04_RS02385 PF01476 LysM domain JCQ04_RS02385 PF04972 BON domain JCQ04_RS02395 PF01266 FAD dependent oxidoreductase JCQ04_RS02400 PF07690 Major Facilitator Superfamily JCQ04_RS02410 PF02863 Arginine repressor, C-terminal domain JCQ04_RS02410 PF01316 Arginine repressor, DNA binding domain JCQ04_RS02415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCQ04_RS02415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCQ04_RS02415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCQ04_RS02415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCQ04_RS02425 PF02566 OsmC-like protein JCQ04_RS02430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS02435 PF00857 Isochorismatase family JCQ04_RS02440 PF16925 Tetracyclin repressor-like, C-terminal domain JCQ04_RS02440 PF00440 Bacterial regulatory proteins, tetR family JCQ04_RS02450 PF02586 SOS response associated peptidase (SRAP) JCQ04_RS02485 PF05067 Manganese containing catalase JCQ04_RS02490 PF01547 Bacterial extracellular solute-binding protein JCQ04_RS02495 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS02540 PF00072 Response regulator receiver domain JCQ04_RS02540 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS02550 PF06800 Sugar transport protein JCQ04_RS02555 PF13520 Amino acid permease JCQ04_RS02560 PF05816 Toxic anion resistance protein (TelA) JCQ04_RS02570 PF00293 NUDIX domain JCQ04_RS02580 PF01048 Phosphorylase superfamily JCQ04_RS02585 PF00857 Isochorismatase family JCQ04_RS02590 PF13229 Right handed beta helix region JCQ04_RS02595 PF01431 Peptidase family M13 JCQ04_RS02595 PF05649 Peptidase family M13 JCQ04_RS02605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCQ04_RS02605 PF14572 Phosphoribosyl synthetase-associated domain JCQ04_RS02610 PF00266 Aminotransferase class-V JCQ04_RS02620 PF07690 Major Facilitator Superfamily JCQ04_RS02635 PF13520 Amino acid permease JCQ04_RS02640 PF00155 Aminotransferase class I and II JCQ04_RS02645 PF07690 Major Facilitator Superfamily JCQ04_RS02660 PF01751 Toprim domain JCQ04_RS02660 PF01131 DNA topoisomerase JCQ04_RS02665 PF00535 Glycosyl transferase family 2 JCQ04_RS02670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCQ04_RS02670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCQ04_RS02675 PF03601 Conserved hypothetical protein 698 JCQ04_RS02685 PF03466 LysR substrate binding domain JCQ04_RS02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS02690 PF01098 Cell cycle protein JCQ04_RS02695 PF03960 ArsC family JCQ04_RS02700 PF01597 Glycine cleavage H-protein JCQ04_RS02705 PF00005 ABC transporter JCQ04_RS02705 PF09383 NIL domain JCQ04_RS02710 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS02715 PF03180 NLPA lipoprotein JCQ04_RS02720 PF00005 ABC transporter JCQ04_RS02725 PF01458 Uncharacterized protein family (UPF0051) JCQ04_RS02730 PF00266 Aminotransferase class-V JCQ04_RS02735 PF01592 NifU-like N terminal domain JCQ04_RS02740 PF01458 Uncharacterized protein family (UPF0051) JCQ04_RS02745 PF00589 Phage integrase family JCQ04_RS02745 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS02790 PF02384 N-6 DNA Methylase JCQ04_RS02790 PF12161 HsdM N-terminal domain JCQ04_RS02800 PF18766 SWI2/SNF2 ATPase JCQ04_RS02800 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCQ04_RS02800 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCQ04_RS02820 PF02687 FtsX-like permease family JCQ04_RS02820 PF00005 ABC transporter JCQ04_RS02820 PF12704 MacB-like periplasmic core domain JCQ04_RS02830 PF13145 PPIC-type PPIASE domain JCQ04_RS02840 PF00781 Diacylglycerol kinase catalytic domain JCQ04_RS02875 PF01638 HxlR-like helix-turn-helix JCQ04_RS02885 PF04203 Sortase domain JCQ04_RS02890 PF00874 PRD domain JCQ04_RS02890 PF03123 CAT RNA binding domain JCQ04_RS02895 PF02378 Phosphotransferase system, EIIC JCQ04_RS02895 PF00367 phosphotransferase system, EIIB JCQ04_RS02895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS02900 PF00232 Glycosyl hydrolase family 1 JCQ04_RS02905 PF07702 UTRA domain JCQ04_RS02905 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS02915 PF03641 Possible lysine decarboxylase JCQ04_RS02925 PF01712 Deoxynucleoside kinase JCQ04_RS02940 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS02940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCQ04_RS02945 PF00232 Glycosyl hydrolase family 1 JCQ04_RS02955 PF00884 Sulfatase JCQ04_RS02965 PF00334 Nucleoside diphosphate kinase JCQ04_RS02970 PF00690 Cation transporter/ATPase, N-terminus JCQ04_RS02970 PF00689 Cation transporting ATPase, C-terminus JCQ04_RS02975 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS02980 PF09383 NIL domain JCQ04_RS02980 PF00005 ABC transporter JCQ04_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS02990 PF03180 NLPA lipoprotein JCQ04_RS02995 PF07687 Peptidase dimerisation domain JCQ04_RS02995 PF01546 Peptidase family M20/M25/M40 JCQ04_RS03000 PF03553 Na+/H+ antiporter family JCQ04_RS03015 PF00324 Amino acid permease JCQ04_RS03025 PF08546 Ketopantoate reductase PanE/ApbA C terminal JCQ04_RS03025 PF02558 Ketopantoate reductase PanE/ApbA JCQ04_RS03030 PF02595 Glycerate kinase family JCQ04_RS03035 PF00005 ABC transporter JCQ04_RS03035 PF12848 ABC transporter JCQ04_RS03040 PF00300 Histidine phosphatase superfamily (branch 1) JCQ04_RS03050 PF13580 SIS domain JCQ04_RS03055 PF00367 phosphotransferase system, EIIB JCQ04_RS03055 PF02378 Phosphotransferase system, EIIC JCQ04_RS03060 PF07972 NrdI Flavodoxin like JCQ04_RS03065 PF13520 Amino acid permease JCQ04_RS03070 PF12679 ABC-2 family transporter protein JCQ04_RS03075 PF00005 ABC transporter JCQ04_RS03080 PF00893 Small Multidrug Resistance protein JCQ04_RS03095 PF01470 Pyroglutamyl peptidase JCQ04_RS03110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCQ04_RS03140 PF03167 Uracil DNA glycosylase superfamily JCQ04_RS03145 PF01515 Phosphate acetyl/butaryl transferase JCQ04_RS03150 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCQ04_RS03155 PF13302 Acetyltransferase (GNAT) domain JCQ04_RS03160 PF14480 DNA polymerase III polC-type N-terminus I JCQ04_RS03160 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCQ04_RS03160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCQ04_RS03160 PF14579 Helix-hairpin-helix motif JCQ04_RS03160 PF11490 DNA polymerase III polC-type N-terminus II JCQ04_RS03160 PF02811 PHP domain JCQ04_RS03160 PF00929 Exonuclease JCQ04_RS03165 PF03372 Endonuclease/Exonuclease/phosphatase family JCQ04_RS03170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS03175 PF01565 FAD binding domain JCQ04_RS03175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCQ04_RS03200 PF00890 FAD binding domain JCQ04_RS03200 PF14537 Cytochrome c3 JCQ04_RS03210 PF13460 NAD(P)H-binding JCQ04_RS03215 PF12822 ECF transporter, substrate-specific component JCQ04_RS03220 PF02441 Flavoprotein JCQ04_RS03225 PF04127 DNA / pantothenate metabolism flavoprotein JCQ04_RS03225 PF02441 Flavoprotein JCQ04_RS03230 PF00107 Zinc-binding dehydrogenase JCQ04_RS03230 PF08240 Alcohol dehydrogenase GroES-like domain JCQ04_RS03240 PF00005 ABC transporter JCQ04_RS03240 PF08402 TOBE domain JCQ04_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS03250 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS03255 PF13416 Bacterial extracellular solute-binding protein JCQ04_RS03260 PF02954 Bacterial regulatory protein, Fis family JCQ04_RS03260 PF00158 Sigma-54 interaction domain JCQ04_RS03270 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS03275 PF03609 PTS system sorbose-specific iic component JCQ04_RS03280 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS03295 PF00480 ROK family JCQ04_RS03325 PF14659 Phage integrase, N-terminal SAM-like domain JCQ04_RS03325 PF00589 Phage integrase family JCQ04_RS03330 PF01717 Cobalamin-independent synthase, Catalytic domain JCQ04_RS03340 PF13411 MerR HTH family regulatory protein JCQ04_RS03345 PF00120 Glutamine synthetase, catalytic domain JCQ04_RS03345 PF03951 Glutamine synthetase, beta-Grasp domain JCQ04_RS03350 PF06418 CTP synthase N-terminus JCQ04_RS03350 PF00117 Glutamine amidotransferase class-I JCQ04_RS03355 PF01116 Fructose-bisphosphate aldolase class-II JCQ04_RS03360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCQ04_RS03365 PF07497 Rho termination factor, RNA-binding domain JCQ04_RS03365 PF07498 Rho termination factor, N-terminal domain JCQ04_RS03365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCQ04_RS03370 PF01197 Ribosomal protein L31 JCQ04_RS03380 PF02378 Phosphotransferase system, EIIC JCQ04_RS03380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS03385 PF01116 Fructose-bisphosphate aldolase class-II JCQ04_RS03390 PF08220 DeoR-like helix-turn-helix domain JCQ04_RS03390 PF00455 DeoR C terminal sensor domain JCQ04_RS03400 PF07690 Major Facilitator Superfamily JCQ04_RS03410 PF13545 Crp-like helix-turn-helix domain JCQ04_RS03430 PF12169 DNA polymerase III subunits gamma and tau domain III JCQ04_RS03435 PF02575 YbaB/EbfC DNA-binding family JCQ04_RS03440 PF13662 Toprim domain JCQ04_RS03440 PF02132 RecR protein JCQ04_RS03445 PF02223 Thymidylate kinase JCQ04_RS03450 PF06153 Cyclic-di-AMP receptor JCQ04_RS03455 PF09115 DNA polymerase III, delta subunit, C terminal JCQ04_RS03460 PF04468 PSP1 C-terminal conserved region JCQ04_RS03465 PF06156 Initiation control protein YabA JCQ04_RS03470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCQ04_RS03475 PF11799 impB/mucB/samB family C-terminal domain JCQ04_RS03475 PF11798 IMS family HHH motif JCQ04_RS03475 PF00817 impB/mucB/samB family JCQ04_RS03485 PF03477 ATP cone domain JCQ04_RS03485 PF13597 Anaerobic ribonucleoside-triphosphate reductase JCQ04_RS03490 PF00005 ABC transporter JCQ04_RS03495 PF02687 FtsX-like permease family JCQ04_RS03505 PF00501 AMP-binding enzyme JCQ04_RS03505 PF13193 AMP-binding enzyme C-terminal domain JCQ04_RS03510 PF03062 MBOAT, membrane-bound O-acyltransferase family JCQ04_RS03515 PF00550 Phosphopantetheine attachment site JCQ04_RS03520 PF04914 DltD protein JCQ04_RS03525 PF05343 M42 glutamyl aminopeptidase JCQ04_RS03535 PF12706 Beta-lactamase superfamily domain JCQ04_RS03540 PF03099 Biotin/lipoate A/B protein ligase family JCQ04_RS03540 PF10437 Bacterial lipoate protein ligase C-terminus JCQ04_RS03550 PF00872 Transposase, Mutator family JCQ04_RS03570 PF06993 Protein of unknown function (DUF1304) JCQ04_RS03575 PF01740 STAS domain JCQ04_RS03575 PF00916 Sulfate permease family JCQ04_RS03585 PF00829 Ribosomal prokaryotic L21 protein JCQ04_RS03595 PF01016 Ribosomal L27 protein JCQ04_RS03600 PF13683 Integrase core domain JCQ04_RS03600 PF01610 Transposase JCQ04_RS03605 PF00158 Sigma-54 interaction domain JCQ04_RS03605 PF00874 PRD domain JCQ04_RS03605 PF03610 PTS system fructose IIA component JCQ04_RS03610 PF03610 PTS system fructose IIA component JCQ04_RS03610 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS03615 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS03615 PF03610 PTS system fructose IIA component JCQ04_RS03620 PF03609 PTS system sorbose-specific iic component JCQ04_RS03625 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS03635 PF04226 Transglycosylase associated protein JCQ04_RS03640 PF00557 Metallopeptidase family M24 JCQ04_RS03640 PF01321 Creatinase/Prolidase N-terminal domain JCQ04_RS03645 PF03780 Asp23 family, cell envelope-related function JCQ04_RS03650 PF01029 NusB family JCQ04_RS03655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCQ04_RS03655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCQ04_RS03660 PF13742 OB-fold nucleic acid binding domain JCQ04_RS03660 PF02601 Exonuclease VII, large subunit JCQ04_RS03665 PF02609 Exonuclease VII small subunit JCQ04_RS03670 PF00348 Polyprenyl synthetase JCQ04_RS03675 PF01479 S4 domain JCQ04_RS03675 PF01728 FtsJ-like methyltransferase JCQ04_RS03680 PF01316 Arginine repressor, DNA binding domain JCQ04_RS03680 PF02863 Arginine repressor, C-terminal domain JCQ04_RS03685 PF13476 AAA domain JCQ04_RS03710 PF02381 MraZ protein, putative antitoxin-like JCQ04_RS03715 PF01795 MraW methylase family JCQ04_RS03725 PF03793 PASTA domain JCQ04_RS03725 PF03717 Penicillin-binding Protein dimerisation domain JCQ04_RS03725 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS03730 PF00953 Glycosyl transferase family 4 JCQ04_RS03730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JCQ04_RS03735 PF08245 Mur ligase middle domain JCQ04_RS03735 PF02875 Mur ligase family, glutamate ligase domain JCQ04_RS03740 PF04101 Glycosyltransferase family 28 C-terminal domain JCQ04_RS03740 PF03033 Glycosyltransferase family 28 N-terminal domain JCQ04_RS03745 PF08478 POTRA domain, FtsQ-type JCQ04_RS03745 PF03799 Cell division protein FtsQ JCQ04_RS03750 PF02491 SHS2 domain inserted in FTSA JCQ04_RS03750 PF11983 Membrane-attachment and polymerisation-promoting switch JCQ04_RS03755 PF00091 Tubulin/FtsZ family, GTPase domain JCQ04_RS03755 PF12327 FtsZ family, C-terminal domain JCQ04_RS03760 PF01168 Alanine racemase, N-terminal domain JCQ04_RS03765 PF04472 Cell division protein SepF JCQ04_RS03775 PF01479 S4 domain JCQ04_RS03775 PF17774 Putative RNA-binding domain in YlmH JCQ04_RS03780 PF05103 DivIVA protein JCQ04_RS03785 PF00133 tRNA synthetases class I (I, L, M and V) JCQ04_RS03785 PF08264 Anticodon-binding domain of tRNA JCQ04_RS03785 PF06827 Zinc finger found in FPG and IleRS JCQ04_RS03790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JCQ04_RS03790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JCQ04_RS03805 PF17746 SfsA N-terminal OB domain JCQ04_RS03805 PF03749 Sugar fermentation stimulation protein RE domain JCQ04_RS03810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS03815 PF00270 DEAD/DEAH box helicase JCQ04_RS03815 PF00271 Helicase conserved C-terminal domain JCQ04_RS03820 PF00874 PRD domain JCQ04_RS03820 PF03610 PTS system fructose IIA component JCQ04_RS03820 PF00158 Sigma-54 interaction domain JCQ04_RS03825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS03830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCQ04_RS03835 PF02378 Phosphotransferase system, EIIC JCQ04_RS03875 PF00872 Transposase, Mutator family JCQ04_RS03880 PF02073 Thermophilic metalloprotease (M29) JCQ04_RS03890 PF00258 Flavodoxin JCQ04_RS03895 PF00557 Metallopeptidase family M24 JCQ04_RS03900 PF03631 Virulence factor BrkB JCQ04_RS03905 PF00953 Glycosyl transferase family 4 JCQ04_RS03920 PF00535 Glycosyl transferase family 2 JCQ04_RS03925 PF00483 Nucleotidyl transferase JCQ04_RS03930 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JCQ04_RS03935 PF16363 GDP-mannose 4,6 dehydratase JCQ04_RS03940 PF04321 RmlD substrate binding domain JCQ04_RS03955 PF01061 ABC-2 type transporter JCQ04_RS03960 PF08239 Bacterial SH3 domain JCQ04_RS03960 PF00005 ABC transporter JCQ04_RS03965 PF00398 Ribosomal RNA adenine dimethylase JCQ04_RS03970 PF00535 Glycosyl transferase family 2 JCQ04_RS03985 PF02397 Bacterial sugar transferase JCQ04_RS03990 PF00535 Glycosyl transferase family 2 JCQ04_RS03995 PF00534 Glycosyl transferases group 1 JCQ04_RS03995 PF13439 Glycosyltransferase Family 4 JCQ04_RS04020 PF02719 Polysaccharide biosynthesis protein JCQ04_RS04025 PF03102 NeuB family JCQ04_RS04025 PF08666 SAF domain JCQ04_RS04030 PF02350 UDP-N-acetylglucosamine 2-epimerase JCQ04_RS04040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JCQ04_RS04055 PF02348 Cytidylyltransferase JCQ04_RS04060 PF01370 NAD dependent epimerase/dehydratase family JCQ04_RS04065 PF13683 Integrase core domain JCQ04_RS04065 PF01610 Transposase JCQ04_RS04105 PF00872 Transposase, Mutator family JCQ04_RS04120 PF02618 YceG-like family JCQ04_RS04125 PF01272 Transcription elongation factor, GreA/GreB, C-term JCQ04_RS04125 PF03449 Transcription elongation factor, N-terminal JCQ04_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS04135 PF07730 Histidine kinase JCQ04_RS04135 PF00672 HAMP domain JCQ04_RS04140 PF00196 Bacterial regulatory proteins, luxR family JCQ04_RS04140 PF00072 Response regulator receiver domain JCQ04_RS04145 PF02254 TrkA-N domain JCQ04_RS04145 PF02080 TrkA-C domain JCQ04_RS04160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCQ04_RS04170 PF01545 Cation efflux family JCQ04_RS04175 PF04138 GtrA-like protein JCQ04_RS04180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCQ04_RS04180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCQ04_RS04185 PF00313 'Cold-shock' DNA-binding domain JCQ04_RS04195 PF03816 Cell envelope-related transcriptional attenuator domain JCQ04_RS04200 PF03073 TspO/MBR family JCQ04_RS04205 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JCQ04_RS04210 PF01938 TRAM domain JCQ04_RS04210 PF05958 tRNA (Uracil-5-)-methyltransferase JCQ04_RS04215 PF02631 RecX family JCQ04_RS04220 PF14815 NUDIX domain JCQ04_RS04220 PF00730 HhH-GPD superfamily base excision DNA repair protein JCQ04_RS04225 PF04167 Protein of unknown function (DUF402) JCQ04_RS04230 PF00583 Acetyltransferase (GNAT) family JCQ04_RS04235 PF01594 AI-2E family transporter JCQ04_RS04240 PF00571 CBS domain JCQ04_RS04240 PF01595 Cyclin M transmembrane N-terminal domain JCQ04_RS04240 PF03471 Transporter associated domain JCQ04_RS04245 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS04245 PF03144 Elongation factor Tu domain 2 JCQ04_RS04245 PF16658 Class II release factor RF3, C-terminal domain JCQ04_RS04265 PF17871 AAA lid domain JCQ04_RS04265 PF07724 AAA domain (Cdc48 subfamily) JCQ04_RS04265 PF10431 C-terminal, D2-small domain, of ClpB protein JCQ04_RS04265 PF00004 ATPase family associated with various cellular activities (AAA) JCQ04_RS04270 PF00381 PTS HPr component phosphorylation site JCQ04_RS04275 PF05524 PEP-utilising enzyme, N-terminal JCQ04_RS04275 PF00391 PEP-utilising enzyme, mobile domain JCQ04_RS04275 PF02896 PEP-utilising enzyme, TIM barrel domain JCQ04_RS04280 PF00534 Glycosyl transferases group 1 JCQ04_RS04280 PF13439 Glycosyltransferase Family 4 JCQ04_RS04285 PF13439 Glycosyltransferase Family 4 JCQ04_RS04285 PF00534 Glycosyl transferases group 1 JCQ04_RS04290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCQ04_RS04290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCQ04_RS04295 PF08796 Protein of unknown function (DUF1797) JCQ04_RS04300 PF08459 UvrC Helix-hairpin-helix N-terminal JCQ04_RS04300 PF02151 UvrB/uvrC motif JCQ04_RS04300 PF01541 GIY-YIG catalytic domain JCQ04_RS04305 PF01047 MarR family JCQ04_RS04310 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCQ04_RS04310 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCQ04_RS04315 PF00550 Phosphopantetheine attachment site JCQ04_RS04320 PF00698 Acyl transferase domain JCQ04_RS04330 PF00109 Beta-ketoacyl synthase, N-terminal domain JCQ04_RS04330 PF02801 Beta-ketoacyl synthase, C-terminal domain JCQ04_RS04335 PF00364 Biotin-requiring enzyme JCQ04_RS04340 PF07977 FabA-like domain JCQ04_RS04345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCQ04_RS04345 PF02785 Biotin carboxylase C-terminal domain JCQ04_RS04345 PF00289 Biotin carboxylase, N-terminal domain JCQ04_RS04350 PF01039 Carboxyl transferase domain JCQ04_RS04355 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCQ04_RS04365 PF01926 50S ribosome-binding GTPase JCQ04_RS04370 PF01985 CRS1 / YhbY (CRM) domain JCQ04_RS04375 PF01467 Cytidylyltransferase-like JCQ04_RS04380 PF01966 HD domain JCQ04_RS04390 PF13649 Methyltransferase domain JCQ04_RS04395 PF05636 HIGH Nucleotidyl Transferase JCQ04_RS04400 PF01709 Transcriptional regulator JCQ04_RS04410 PF13538 UvrD-like helicase C-terminal domain JCQ04_RS04415 PF00403 Heavy-metal-associated domain JCQ04_RS04420 PF01361 Tautomerase enzyme JCQ04_RS04425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCQ04_RS04425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCQ04_RS04425 PF02824 TGS domain JCQ04_RS04425 PF03129 Anticodon binding domain JCQ04_RS04435 PF01380 SIS domain JCQ04_RS04435 PF01418 Helix-turn-helix domain, rpiR family JCQ04_RS04440 PF03717 Penicillin-binding Protein dimerisation domain JCQ04_RS04440 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS04450 PF00860 Permease family JCQ04_RS04455 PF07690 Major Facilitator Superfamily JCQ04_RS04465 PF14579 Helix-hairpin-helix motif JCQ04_RS04465 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCQ04_RS04465 PF02811 PHP domain JCQ04_RS04465 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCQ04_RS04465 PF01336 OB-fold nucleic acid binding domain JCQ04_RS04470 PF00365 Phosphofructokinase JCQ04_RS04475 PF02887 Pyruvate kinase, alpha/beta domain JCQ04_RS04475 PF00224 Pyruvate kinase, barrel domain JCQ04_RS04475 PF00391 PEP-utilising enzyme, mobile domain JCQ04_RS04480 PF03466 LysR substrate binding domain JCQ04_RS04480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS04490 PF01783 Ribosomal L32p protein family JCQ04_RS04500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCQ04_RS04500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCQ04_RS04505 PF00072 Response regulator receiver domain JCQ04_RS04505 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS04510 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS04510 PF18719 ArlS sensor domain JCQ04_RS04615 PF00874 PRD domain JCQ04_RS04615 PF03123 CAT RNA binding domain JCQ04_RS04620 PF04794 YdjC-like protein JCQ04_RS04625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS04625 PF02378 Phosphotransferase system, EIIC JCQ04_RS04625 PF00367 phosphotransferase system, EIIB JCQ04_RS04630 PF02056 Family 4 glycosyl hydrolase JCQ04_RS04630 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCQ04_RS04635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS04635 PF02378 Phosphotransferase system, EIIC JCQ04_RS04635 PF00367 phosphotransferase system, EIIB JCQ04_RS04640 PF02378 Phosphotransferase system, EIIC JCQ04_RS04660 PF08220 DeoR-like helix-turn-helix domain JCQ04_RS04660 PF00455 DeoR C terminal sensor domain JCQ04_RS04670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS04675 PF03611 PTS system sugar-specific permease component JCQ04_RS04685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCQ04_RS04690 PF01261 Xylose isomerase-like TIM barrel JCQ04_RS04695 PF00596 Class II Aldolase and Adducin N-terminal domain JCQ04_RS04700 PF00583 Acetyltransferase (GNAT) family JCQ04_RS04720 PF00874 PRD domain JCQ04_RS04720 PF05043 Mga helix-turn-helix domain JCQ04_RS04720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS04720 PF08279 HTH domain JCQ04_RS04720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS04740 PF03611 PTS system sugar-specific permease component JCQ04_RS04755 PF01738 Dienelactone hydrolase family JCQ04_RS04760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCQ04_RS04765 PF07702 UTRA domain JCQ04_RS04765 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS04770 PF02378 Phosphotransferase system, EIIC JCQ04_RS04775 PF00232 Glycosyl hydrolase family 1 JCQ04_RS04780 PF00582 Universal stress protein family JCQ04_RS04785 PF03551 Transcriptional regulator PadR-like family JCQ04_RS04795 PF03960 ArsC family JCQ04_RS04805 PF08543 Phosphomethylpyrimidine kinase JCQ04_RS04810 PF13396 Phospholipase_D-nuclease N-terminal JCQ04_RS04810 PF13091 PLD-like domain JCQ04_RS04815 PF00689 Cation transporting ATPase, C-terminus JCQ04_RS04815 PF00690 Cation transporter/ATPase, N-terminus JCQ04_RS04825 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JCQ04_RS04825 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JCQ04_RS04830 PF02803 Thiolase, C-terminal domain JCQ04_RS04830 PF00108 Thiolase, N-terminal domain JCQ04_RS04845 PF00248 Aldo/keto reductase family JCQ04_RS04860 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS04860 PF03143 Elongation factor Tu C-terminal domain JCQ04_RS04860 PF03144 Elongation factor Tu domain 2 JCQ04_RS04865 PF09924 Uncharacterised conserved protein (DUF2156) JCQ04_RS04865 PF03706 Lysylphosphatidylglycerol synthase TM region JCQ04_RS04870 PF00561 alpha/beta hydrolase fold JCQ04_RS04890 PF01807 CHC2 zinc finger JCQ04_RS04890 PF08275 DNA primase catalytic core, N-terminal domain JCQ04_RS04890 PF10410 DnaB-helicase binding domain of primase JCQ04_RS04895 PF04542 Sigma-70 region 2 JCQ04_RS04895 PF04545 Sigma-70, region 4 JCQ04_RS04895 PF03979 Sigma-70 factor, region 1.1 JCQ04_RS04895 PF00140 Sigma-70 factor, region 1.2 JCQ04_RS04895 PF04539 Sigma-70 region 3 JCQ04_RS04900 PF18041 MapZ extracellular domain 1 JCQ04_RS04900 PF18708 MapZ extracellular C-terminal domain 2 JCQ04_RS04905 PF17783 CvfB-like winged helix domain JCQ04_RS04905 PF13509 S1 domain JCQ04_RS04910 PF01475 Ferric uptake regulator family JCQ04_RS04920 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS04920 PF00589 Phage integrase family JCQ04_RS04930 PF02616 Segregation and condensation protein ScpA JCQ04_RS04935 PF04079 Segregation and condensation complex subunit ScpB JCQ04_RS04940 PF01479 S4 domain JCQ04_RS04940 PF00849 RNA pseudouridylate synthase JCQ04_RS04945 PF12822 ECF transporter, substrate-specific component JCQ04_RS04950 PF03606 C4-dicarboxylate anaerobic carrier JCQ04_RS04955 PF01546 Peptidase family M20/M25/M40 JCQ04_RS04975 PF00271 Helicase conserved C-terminal domain JCQ04_RS04975 PF00270 DEAD/DEAH box helicase JCQ04_RS04985 PF02224 Cytidylate kinase JCQ04_RS04990 PF00575 S1 RNA binding domain JCQ04_RS04995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCQ04_RS04995 PF01926 50S ribosome-binding GTPase JCQ04_RS05000 PF00216 Bacterial DNA-binding protein JCQ04_RS05020 PF08858 IDEAL domain JCQ04_RS05020 PF08864 UPF0302 domain JCQ04_RS05025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS05025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCQ04_RS05030 PF03819 MazG nucleotide pyrophosphohydrolase domain JCQ04_RS05035 PF12627 Probable RNA and SrmB- binding site of polymerase A JCQ04_RS05035 PF01743 Poly A polymerase head domain JCQ04_RS05035 PF13735 tRNA nucleotidyltransferase domain 2 putative JCQ04_RS05055 PF00999 Sodium/hydrogen exchanger family JCQ04_RS05060 PF00005 ABC transporter JCQ04_RS05060 PF16326 ABC transporter C-terminal domain JCQ04_RS05060 PF12848 ABC transporter JCQ04_RS05065 PF00303 Thymidylate synthase JCQ04_RS05070 PF00186 Dihydrofolate reductase JCQ04_RS05075 PF03006 Haemolysin-III related JCQ04_RS05080 PF02645 Uncharacterised protein, DegV family COG1307 JCQ04_RS05085 PF13472 GDSL-like Lipase/Acylhydrolase family JCQ04_RS05090 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JCQ04_RS05095 PF01625 Peptide methionine sulfoxide reductase JCQ04_RS05100 PF06855 YozE SAM-like fold JCQ04_RS05105 PF10502 Signal peptidase, peptidase S26 JCQ04_RS05125 PF01926 50S ribosome-binding GTPase JCQ04_RS05130 PF01351 Ribonuclease HII JCQ04_RS05135 PF02481 DNA recombination-mediator protein A JCQ04_RS05135 PF18255 DNA processing protein A sterile alpha motif domain JCQ04_RS05140 PF01131 DNA topoisomerase JCQ04_RS05140 PF01751 Toprim domain JCQ04_RS05140 PF01396 Topoisomerase DNA binding C4 zinc finger JCQ04_RS05145 PF01134 Glucose inhibited division protein A JCQ04_RS05150 PF00589 Phage integrase family JCQ04_RS05150 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS05155 PF00227 Proteasome subunit JCQ04_RS05160 PF00004 ATPase family associated with various cellular activities (AAA) JCQ04_RS05160 PF07724 AAA domain (Cdc48 subfamily) JCQ04_RS05160 PF10431 C-terminal, D2-small domain, of ClpB protein JCQ04_RS05165 PF06018 CodY GAF-like domain JCQ04_RS05165 PF08222 CodY helix-turn-helix domain JCQ04_RS05180 PF02660 Glycerol-3-phosphate acyltransferase JCQ04_RS05185 PF13380 CoA binding domain JCQ04_RS05190 PF01751 Toprim domain JCQ04_RS05190 PF00986 DNA gyrase B subunit, carboxyl terminus JCQ04_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS05190 PF00204 DNA gyrase B JCQ04_RS05195 PF00521 DNA gyrase/topoisomerase IV, subunit A JCQ04_RS05195 PF03989 DNA gyrase C-terminal domain, beta-propeller JCQ04_RS05200 PF02901 Pyruvate formate lyase-like JCQ04_RS05200 PF01228 Glycine radical JCQ04_RS05205 PF04055 Radical SAM superfamily JCQ04_RS05210 PF02833 DHHA2 domain JCQ04_RS05210 PF01368 DHH family JCQ04_RS05230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS05240 PF00326 Prolyl oligopeptidase family JCQ04_RS05245 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS05255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCQ04_RS05255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS05265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCQ04_RS05270 PF00005 ABC transporter JCQ04_RS05270 PF00571 CBS domain JCQ04_RS05275 PF00403 Heavy-metal-associated domain JCQ04_RS05275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS05290 PF00005 ABC transporter JCQ04_RS05295 PF01026 TatD related DNase JCQ04_RS05300 PF05257 CHAP domain JCQ04_RS05300 PF01476 LysM domain JCQ04_RS05320 PF00872 Transposase, Mutator family JCQ04_RS05330 PF13683 Integrase core domain JCQ04_RS05330 PF01610 Transposase JCQ04_RS05350 PF00155 Aminotransferase class I and II JCQ04_RS05360 PF01979 Amidohydrolase family JCQ04_RS05370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCQ04_RS05370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCQ04_RS05375 PF00072 Response regulator receiver domain JCQ04_RS05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS05380 PF00989 PAS fold JCQ04_RS05380 PF17203 Single cache domain 3 JCQ04_RS05380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCQ04_RS05385 PF17203 Single cache domain 3 JCQ04_RS05385 PF00989 PAS fold JCQ04_RS05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS05385 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JCQ04_RS05395 PF01145 SPFH domain / Band 7 family JCQ04_RS05395 PF15975 Flotillin JCQ04_RS05410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS05410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCQ04_RS05420 PF02557 D-alanyl-D-alanine carboxypeptidase JCQ04_RS05425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS05425 PF01476 LysM domain JCQ04_RS05435 PF13416 Bacterial extracellular solute-binding protein JCQ04_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS05455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS05455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCQ04_RS05460 PF00156 Phosphoribosyl transferase domain JCQ04_RS05465 PF00860 Permease family JCQ04_RS05470 PF00731 AIR carboxylase JCQ04_RS05475 PF02222 ATP-grasp domain JCQ04_RS05475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCQ04_RS05480 PF00206 Lyase JCQ04_RS05480 PF10397 Adenylosuccinate lyase C-terminus JCQ04_RS05490 PF01259 SAICAR synthetase JCQ04_RS05495 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JCQ04_RS05505 PF02769 AIR synthase related protein, C-terminal domain JCQ04_RS05505 PF00586 AIR synthase related protein, N-terminal domain JCQ04_RS05505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCQ04_RS05510 PF00156 Phosphoribosyl transferase domain JCQ04_RS05510 PF13537 Glutamine amidotransferase domain JCQ04_RS05515 PF00586 AIR synthase related protein, N-terminal domain JCQ04_RS05515 PF02769 AIR synthase related protein, C-terminal domain JCQ04_RS05520 PF00551 Formyl transferase JCQ04_RS05525 PF02142 MGS-like domain JCQ04_RS05525 PF01808 AICARFT/IMPCHase bienzyme JCQ04_RS05530 PF02843 Phosphoribosylglycinamide synthetase, C domain JCQ04_RS05530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCQ04_RS05530 PF02844 Phosphoribosylglycinamide synthetase, N domain JCQ04_RS05535 PF00248 Aldo/keto reductase family JCQ04_RS05540 PF00072 Response regulator receiver domain JCQ04_RS05540 PF04397 LytTr DNA-binding domain JCQ04_RS05545 PF00672 HAMP domain JCQ04_RS05545 PF02743 Cache domain JCQ04_RS05545 PF06580 Histidine kinase JCQ04_RS05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS05555 PF13407 Periplasmic binding protein domain JCQ04_RS05560 PF00005 ABC transporter JCQ04_RS05565 PF02653 Branched-chain amino acid transport system / permease component JCQ04_RS05570 PF00478 IMP dehydrogenase / GMP reductase domain JCQ04_RS05575 PF00155 Aminotransferase class I and II JCQ04_RS05575 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS05580 PF00676 Dehydrogenase E1 component JCQ04_RS05585 PF02780 Transketolase, C-terminal domain JCQ04_RS05585 PF02779 Transketolase, pyrimidine binding domain JCQ04_RS05590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCQ04_RS05590 PF02817 e3 binding domain JCQ04_RS05590 PF00364 Biotin-requiring enzyme JCQ04_RS05595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS05595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS05600 PF05256 Uncharacterised protein family (UPF0223) JCQ04_RS05605 PF00459 Inositol monophosphatase family JCQ04_RS05610 PF03144 Elongation factor Tu domain 2 JCQ04_RS05610 PF00679 Elongation factor G C-terminus JCQ04_RS05610 PF14492 Elongation Factor G, domain II JCQ04_RS05610 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS05615 PF00570 HRDC domain JCQ04_RS05615 PF00270 DEAD/DEAH box helicase JCQ04_RS05615 PF16124 RecQ zinc-binding JCQ04_RS05615 PF09382 RQC domain JCQ04_RS05615 PF00271 Helicase conserved C-terminal domain JCQ04_RS05620 PF07408 Protein of unknown function (DUF1507) JCQ04_RS05625 PF01098 Cell cycle protein JCQ04_RS05630 PF00364 Biotin-requiring enzyme JCQ04_RS05630 PF02436 Conserved carboxylase domain JCQ04_RS05630 PF00289 Biotin carboxylase, N-terminal domain JCQ04_RS05630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCQ04_RS05630 PF02785 Biotin carboxylase C-terminal domain JCQ04_RS05630 PF00682 HMGL-like JCQ04_RS05645 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JCQ04_RS05655 PF01467 Cytidylyltransferase-like JCQ04_RS05660 PF05362 Lon protease (S16) C-terminal proteolytic domain JCQ04_RS05660 PF13180 PDZ domain JCQ04_RS05665 PF10531 SLBB domain JCQ04_RS05680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCQ04_RS05685 PF03772 Competence protein JCQ04_RS05685 PF13567 Domain of unknown function (DUF4131) JCQ04_RS05685 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS05690 PF06144 DNA polymerase III, delta subunit JCQ04_RS05695 PF01649 Ribosomal protein S20 JCQ04_RS05705 PF04284 Protein of unknown function (DUF441) JCQ04_RS05715 PF02673 Bacitracin resistance protein BacA JCQ04_RS05725 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS05735 PF04461 Protein of unknown function (DUF520) JCQ04_RS05740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS05740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCQ04_RS05745 PF01883 Iron-sulfur cluster assembly protein JCQ04_RS05760 PF01476 LysM domain JCQ04_RS05760 PF05257 CHAP domain JCQ04_RS05815 PF13529 Peptidase_C39 like family JCQ04_RS05835 PF00854 POT family JCQ04_RS05845 PF12705 PD-(D/E)XK nuclease superfamily JCQ04_RS05850 PF13361 UvrD-like helicase C-terminal domain JCQ04_RS05850 PF12705 PD-(D/E)XK nuclease superfamily JCQ04_RS05850 PF00580 UvrD/REP helicase N-terminal domain JCQ04_RS05855 PF01638 HxlR-like helix-turn-helix JCQ04_RS05860 PF01409 tRNA synthetases class II core domain (F) JCQ04_RS05860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCQ04_RS05865 PF03147 Ferredoxin-fold anticodon binding domain JCQ04_RS05865 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCQ04_RS05865 PF01588 Putative tRNA binding domain JCQ04_RS05865 PF03484 tRNA synthetase B5 domain JCQ04_RS05865 PF03483 B3/4 domain JCQ04_RS05870 PF00579 tRNA synthetases class I (W and Y) JCQ04_RS05875 PF00005 ABC transporter JCQ04_RS05880 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCQ04_RS05885 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS05895 PF01177 Asp/Glu/Hydantoin racemase JCQ04_RS05900 PF03725 3' exoribonuclease family, domain 2 JCQ04_RS05900 PF01138 3' exoribonuclease family, domain 1 JCQ04_RS05915 PF00924 Mechanosensitive ion channel JCQ04_RS05920 PF01063 Amino-transferase class IV JCQ04_RS05930 PF07977 FabA-like domain JCQ04_RS05935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCQ04_RS05955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCQ04_RS05955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCQ04_RS05960 PF09269 Domain of unknown function (DUF1967) JCQ04_RS05960 PF01926 50S ribosome-binding GTPase JCQ04_RS05960 PF01018 GTP1/OBG JCQ04_RS05970 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS05970 PF12706 Beta-lactamase superfamily domain JCQ04_RS05975 PF00106 short chain dehydrogenase JCQ04_RS05980 PF06305 Lipopolysaccharide assembly protein A domain JCQ04_RS05985 PF01368 DHH family JCQ04_RS05985 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JCQ04_RS05985 PF17768 RecJ OB domain JCQ04_RS05985 PF02272 DHHA1 domain JCQ04_RS05990 PF00156 Phosphoribosyl transferase domain JCQ04_RS06000 PF01726 LexA DNA binding domain JCQ04_RS06000 PF00717 Peptidase S24-like JCQ04_RS06005 PF05979 Bacterial protein of unknown function (DUF896) JCQ04_RS06010 PF02780 Transketolase, C-terminal domain JCQ04_RS06010 PF02779 Transketolase, pyrimidine binding domain JCQ04_RS06010 PF00456 Transketolase, thiamine diphosphate binding domain JCQ04_RS06020 PF01476 LysM domain JCQ04_RS06020 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS06025 PF00291 Pyridoxal-phosphate dependent enzyme JCQ04_RS06030 PF01475 Ferric uptake regulator family JCQ04_RS06035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS06035 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS06050 PF07690 Major Facilitator Superfamily JCQ04_RS06055 PF07261 Replication initiation and membrane attachment JCQ04_RS06060 PF00633 Helix-hairpin-helix motif JCQ04_RS06060 PF10576 Iron-sulfur binding domain of endonuclease III JCQ04_RS06060 PF00730 HhH-GPD superfamily base excision DNA repair protein JCQ04_RS06070 PF00912 Transglycosylase JCQ04_RS06070 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS06075 PF03838 Recombination protein U JCQ04_RS06080 PF06908 YspA SLOG family JCQ04_RS06085 PF05103 DivIVA protein JCQ04_RS06095 PF01170 Putative RNA methylase family UPF0020 JCQ04_RS06095 PF02926 THUMP domain JCQ04_RS06100 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JCQ04_RS06105 PF01966 HD domain JCQ04_RS06110 PF00155 Aminotransferase class I and II JCQ04_RS06115 PF01370 NAD dependent epimerase/dehydratase family JCQ04_RS06120 PF13520 Amino acid permease JCQ04_RS06135 PF00271 Helicase conserved C-terminal domain JCQ04_RS06135 PF00270 DEAD/DEAH box helicase JCQ04_RS06140 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS06145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCQ04_RS06145 PF01411 tRNA synthetases class II (A) JCQ04_RS06145 PF02272 DHHA1 domain JCQ04_RS06150 PF12822 ECF transporter, substrate-specific component JCQ04_RS06160 PF13456 Reverse transcriptase-like JCQ04_RS06165 PF17255 EbsA-like protein JCQ04_RS06170 PF00313 'Cold-shock' DNA-binding domain JCQ04_RS06175 PF01268 Formate--tetrahydrofolate ligase JCQ04_RS06190 PF01252 Signal peptidase (SPase) II JCQ04_RS06195 PF01479 S4 domain JCQ04_RS06195 PF00849 RNA pseudouridylate synthase JCQ04_RS06200 PF00156 Phosphoribosyl transferase domain JCQ04_RS06205 PF00860 Permease family JCQ04_RS06210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCQ04_RS06210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCQ04_RS06215 PF01979 Amidohydrolase family JCQ04_RS06220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCQ04_RS06220 PF00117 Glutamine amidotransferase class-I JCQ04_RS06225 PF02142 MGS-like domain JCQ04_RS06225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCQ04_RS06225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCQ04_RS06230 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JCQ04_RS06230 PF00970 Oxidoreductase FAD-binding domain JCQ04_RS06235 PF01180 Dihydroorotate dehydrogenase JCQ04_RS06240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCQ04_RS06245 PF00156 Phosphoribosyl transferase domain JCQ04_RS06265 PF03466 LysR substrate binding domain JCQ04_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS06270 PF05670 NFACT protein RNA binding domain JCQ04_RS06285 PF02653 Branched-chain amino acid transport system / permease component JCQ04_RS06290 PF00005 ABC transporter JCQ04_RS06295 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCQ04_RS06295 PF08501 Shikimate dehydrogenase substrate binding domain JCQ04_RS06300 PF03816 Cell envelope-related transcriptional attenuator domain JCQ04_RS06310 PF01131 DNA topoisomerase JCQ04_RS06310 PF01751 Toprim domain JCQ04_RS06330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCQ04_RS06330 PF00056 lactate/malate dehydrogenase, NAD binding domain JCQ04_RS06335 PF02311 AraC-like ligand binding domain JCQ04_RS06335 PF12833 Helix-turn-helix domain JCQ04_RS06350 PF03611 PTS system sugar-specific permease component JCQ04_RS06360 PF08279 HTH domain JCQ04_RS06360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS06360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS06360 PF00874 PRD domain JCQ04_RS06360 PF05043 Mga helix-turn-helix domain JCQ04_RS06370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCQ04_RS06370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS06410 PF00005 ABC transporter JCQ04_RS06420 PF00072 Response regulator receiver domain JCQ04_RS06420 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS06425 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS06430 PF11181 Heat induced stress protein YflT JCQ04_RS06430 PF09557 Domain of unknown function (DUF2382) JCQ04_RS06455 PF08543 Phosphomethylpyrimidine kinase JCQ04_RS06465 PF04260 Protein of unknown function (DUF436) JCQ04_RS06470 PF00128 Alpha amylase, catalytic domain JCQ04_RS06470 PF16657 Maltogenic Amylase, C-terminal domain JCQ04_RS06485 PF02645 Uncharacterised protein, DegV family COG1307 JCQ04_RS06490 PF14667 Polysaccharide biosynthesis C-terminal domain JCQ04_RS06490 PF01943 Polysaccharide biosynthesis protein JCQ04_RS06505 PF01545 Cation efflux family JCQ04_RS06505 PF16916 Dimerisation domain of Zinc Transporter JCQ04_RS06535 PF08903 Domain of unknown function (DUF1846) JCQ04_RS06540 PF07662 Na+ dependent nucleoside transporter C-terminus JCQ04_RS06540 PF01773 Na+ dependent nucleoside transporter N-terminus JCQ04_RS06545 PF00625 Guanylate kinase JCQ04_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS06575 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCQ04_RS06580 PF01425 Amidase JCQ04_RS06585 PF01180 Dihydroorotate dehydrogenase JCQ04_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS06620 PF13416 Bacterial extracellular solute-binding protein JCQ04_RS06625 PF00128 Alpha amylase, catalytic domain JCQ04_RS06625 PF02903 Alpha amylase, N-terminal ig-like domain JCQ04_RS06630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCQ04_RS06630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS06640 PF02566 OsmC-like protein JCQ04_RS06645 PF01047 MarR family JCQ04_RS06650 PF01594 AI-2E family transporter JCQ04_RS06665 PF03786 D-mannonate dehydratase (UxuA) JCQ04_RS06670 PF08125 Mannitol dehydrogenase C-terminal domain JCQ04_RS06670 PF01232 Mannitol dehydrogenase Rossmann domain JCQ04_RS06680 PF00578 AhpC/TSA family JCQ04_RS06685 PF13192 Thioredoxin domain JCQ04_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS06700 PF00999 Sodium/hydrogen exchanger family JCQ04_RS06705 PF03717 Penicillin-binding Protein dimerisation domain JCQ04_RS06705 PF05223 NTF2-like N-terminal transpeptidase domain JCQ04_RS06705 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS06710 PF03816 Cell envelope-related transcriptional attenuator domain JCQ04_RS06715 PF01098 Cell cycle protein JCQ04_RS06725 PF01613 Flavin reductase like domain JCQ04_RS06730 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCQ04_RS06740 PF02779 Transketolase, pyrimidine binding domain JCQ04_RS06740 PF02780 Transketolase, C-terminal domain JCQ04_RS06740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCQ04_RS06750 PF04960 Glutaminase JCQ04_RS06770 PF02486 Replication initiation factor JCQ04_RS06770 PF18106 Rolling Circle replication initiation protein N-terminal domain JCQ04_RS06785 PF01610 Transposase JCQ04_RS06785 PF13683 Integrase core domain JCQ04_RS06790 PF01872 RibD C-terminal domain JCQ04_RS06800 PF00186 Dihydrofolate reductase JCQ04_RS06810 PF00909 Ammonium Transporter Family JCQ04_RS06815 PF04226 Transglycosylase associated protein JCQ04_RS06820 PF03780 Asp23 family, cell envelope-related function JCQ04_RS06840 PF11188 Protein of unknown function (DUF2975) JCQ04_RS06845 PF13443 Cro/C1-type HTH DNA-binding domain JCQ04_RS06860 PF04226 Transglycosylase associated protein JCQ04_RS06865 PF03780 Asp23 family, cell envelope-related function JCQ04_RS06895 PF01501 Glycosyl transferase family 8 JCQ04_RS06900 PF01501 Glycosyl transferase family 8 JCQ04_RS06930 PF01381 Helix-turn-helix JCQ04_RS06945 PF00313 'Cold-shock' DNA-binding domain JCQ04_RS06960 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS06965 PF03786 D-mannonate dehydratase (UxuA) JCQ04_RS06985 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS06990 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS07000 PF00465 Iron-containing alcohol dehydrogenase JCQ04_RS07010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCQ04_RS07010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCQ04_RS07015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCQ04_RS07015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JCQ04_RS07020 PF02685 Glucokinase JCQ04_RS07020 PF01418 Helix-turn-helix domain, rpiR family JCQ04_RS07020 PF01380 SIS domain JCQ04_RS07030 PF00135 Carboxylesterase family JCQ04_RS07035 PF12146 Serine aminopeptidase, S33 JCQ04_RS07045 PF03960 ArsC family JCQ04_RS07070 PF13145 PPIC-type PPIASE domain JCQ04_RS07075 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCQ04_RS07090 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JCQ04_RS07090 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JCQ04_RS07095 PF03608 PTS system enzyme II sorbitol-specific factor JCQ04_RS07105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS07105 PF00874 PRD domain JCQ04_RS07105 PF05043 Mga helix-turn-helix domain JCQ04_RS07105 PF08279 HTH domain JCQ04_RS07110 PF00106 short chain dehydrogenase JCQ04_RS07130 PF00872 Transposase, Mutator family JCQ04_RS07140 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS07140 PF00589 Phage integrase family JCQ04_RS07145 PF00589 Phage integrase family JCQ04_RS07145 PF14659 Phage integrase, N-terminal SAM-like domain JCQ04_RS07165 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCQ04_RS07165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCQ04_RS07165 PF00703 Glycosyl hydrolases family 2 JCQ04_RS07170 PF00933 Glycosyl hydrolase family 3 N terminal domain JCQ04_RS07190 PF02614 Glucuronate isomerase JCQ04_RS07195 PF03786 D-mannonate dehydratase (UxuA) JCQ04_RS07200 PF01232 Mannitol dehydrogenase Rossmann domain JCQ04_RS07200 PF08125 Mannitol dehydrogenase C-terminal domain JCQ04_RS07205 PF07702 UTRA domain JCQ04_RS07205 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS07265 PF12648 TcpE family JCQ04_RS07305 PF02486 Replication initiation factor JCQ04_RS07305 PF18106 Rolling Circle replication initiation protein N-terminal domain JCQ04_RS07365 PF06421 GTP-binding protein LepA C-terminus JCQ04_RS07365 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS07365 PF03144 Elongation factor Tu domain 2 JCQ04_RS07365 PF00679 Elongation factor G C-terminus JCQ04_RS07385 PF10431 C-terminal, D2-small domain, of ClpB protein JCQ04_RS07385 PF07724 AAA domain (Cdc48 subfamily) JCQ04_RS07385 PF00004 ATPase family associated with various cellular activities (AAA) JCQ04_RS07385 PF17871 AAA lid domain JCQ04_RS07385 PF02861 Clp amino terminal domain, pathogenicity island component JCQ04_RS07400 PF00781 Diacylglycerol kinase catalytic domain JCQ04_RS07405 PF07687 Peptidase dimerisation domain JCQ04_RS07405 PF01546 Peptidase family M20/M25/M40 JCQ04_RS07410 PF01784 NIF3 (NGG1p interacting factor 3) JCQ04_RS07415 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JCQ04_RS07425 PF07319 Primosomal protein DnaI N-terminus JCQ04_RS07425 PF01695 IstB-like ATP binding protein JCQ04_RS07435 PF03477 ATP cone domain JCQ04_RS07445 PF01121 Dephospho-CoA kinase JCQ04_RS07450 PF06827 Zinc finger found in FPG and IleRS JCQ04_RS07450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCQ04_RS07450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCQ04_RS07455 PF00476 DNA polymerase family A JCQ04_RS07455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCQ04_RS07455 PF01367 5'-3' exonuclease, C-terminal SAM fold JCQ04_RS07460 PF01027 Inhibitor of apoptosis-promoting Bax1 JCQ04_RS07470 PF08245 Mur ligase middle domain JCQ04_RS07470 PF02875 Mur ligase family, glutamate ligase domain JCQ04_RS07470 PF01225 Mur ligase family, catalytic domain JCQ04_RS07475 PF02698 DUF218 domain JCQ04_RS07480 PF10263 SprT-like family JCQ04_RS07485 PF00575 S1 RNA binding domain JCQ04_RS07485 PF09371 Tex-like protein N-terminal domain JCQ04_RS07485 PF17674 HHH domain JCQ04_RS07485 PF16921 Tex protein YqgF-like domain JCQ04_RS07495 PF17773 UPF0176 acylphosphatase like domain JCQ04_RS07495 PF00581 Rhodanese-like domain JCQ04_RS07495 PF12368 Rhodanase C-terminal JCQ04_RS07500 PF13683 Integrase core domain JCQ04_RS07500 PF01610 Transposase JCQ04_RS07510 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS07515 PF00300 Histidine phosphatase superfamily (branch 1) JCQ04_RS07535 PF07556 Protein of unknown function (DUF1538) JCQ04_RS07540 PF07556 Protein of unknown function (DUF1538) JCQ04_RS07545 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS07555 PF13416 Bacterial extracellular solute-binding protein JCQ04_RS07560 PF00072 Response regulator receiver domain JCQ04_RS07560 PF12833 Helix-turn-helix domain JCQ04_RS07565 PF12833 Helix-turn-helix domain JCQ04_RS07570 PF06580 Histidine kinase JCQ04_RS07570 PF02743 Cache domain JCQ04_RS07570 PF00672 HAMP domain JCQ04_RS07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS07575 PF00800 Prephenate dehydratase JCQ04_RS07580 PF01202 Shikimate kinase JCQ04_RS07585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCQ04_RS07590 PF01842 ACT domain JCQ04_RS07590 PF02153 Prephenate dehydrogenase JCQ04_RS07595 PF01264 Chorismate synthase JCQ04_RS07600 PF01761 3-dehydroquinate synthase JCQ04_RS07605 PF00793 DAHP synthetase I family JCQ04_RS07605 PF18152 DAHP synthase ferredoxin-like domain JCQ04_RS07610 PF02929 Beta galactosidase small chain JCQ04_RS07615 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCQ04_RS07615 PF00703 Glycosyl hydrolases family 2 JCQ04_RS07615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCQ04_RS07620 PF16875 Glycosyl hydrolase family 36 N-terminal domain JCQ04_RS07620 PF16874 Glycosyl hydrolase family 36 C-terminal domain JCQ04_RS07625 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS07635 PF01717 Cobalamin-independent synthase, Catalytic domain JCQ04_RS07645 PF05958 tRNA (Uracil-5-)-methyltransferase JCQ04_RS07650 PF00781 Diacylglycerol kinase catalytic domain JCQ04_RS07655 PF02637 GatB domain JCQ04_RS07655 PF02934 GatB/GatE catalytic domain JCQ04_RS07660 PF01425 Amidase JCQ04_RS07665 PF02686 Glu-tRNAGln amidotransferase C subunit JCQ04_RS07670 PF00533 BRCA1 C Terminus (BRCT) domain JCQ04_RS07670 PF01653 NAD-dependent DNA ligase adenylation domain JCQ04_RS07670 PF03120 NAD-dependent DNA ligase OB-fold domain JCQ04_RS07670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCQ04_RS07670 PF12826 Helix-hairpin-helix motif JCQ04_RS07675 PF00580 UvrD/REP helicase N-terminal domain JCQ04_RS07675 PF13361 UvrD-like helicase C-terminal domain JCQ04_RS07680 PF00654 Voltage gated chloride channel JCQ04_RS07685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS07685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS07690 PF00294 pfkB family carbohydrate kinase JCQ04_RS07695 PF08220 DeoR-like helix-turn-helix domain JCQ04_RS07695 PF00455 DeoR C terminal sensor domain JCQ04_RS07715 PF01926 50S ribosome-binding GTPase JCQ04_RS07720 PF06689 ClpX C4-type zinc finger JCQ04_RS07720 PF10431 C-terminal, D2-small domain, of ClpB protein JCQ04_RS07720 PF07724 AAA domain (Cdc48 subfamily) JCQ04_RS07725 PF05697 Bacterial trigger factor protein (TF) JCQ04_RS07725 PF05698 Bacterial trigger factor protein (TF) C-terminus JCQ04_RS07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCQ04_RS07735 PF06271 RDD family JCQ04_RS07740 PF01343 Peptidase family S49 JCQ04_RS07750 PF01380 SIS domain JCQ04_RS07760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCQ04_RS07760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCQ04_RS07760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCQ04_RS07760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCQ04_RS07770 PF02457 DisA bacterial checkpoint controller nucleotide-binding JCQ04_RS07775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCQ04_RS07775 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JCQ04_RS07775 PF12838 4Fe-4S dicluster domain JCQ04_RS07775 PF10371 Domain of unknown function JCQ04_RS07775 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JCQ04_RS07775 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JCQ04_RS07810 PF00872 Transposase, Mutator family JCQ04_RS07830 PF14527 WhiA LAGLIDADG-like domain JCQ04_RS07830 PF02650 WhiA C-terminal HTH domain JCQ04_RS07830 PF10298 WhiA N-terminal LAGLIDADG-like domain JCQ04_RS07835 PF01933 Uncharacterised protein family UPF0052 JCQ04_RS07840 PF03668 P-loop ATPase protein family JCQ04_RS07845 PF01177 Asp/Glu/Hydantoin racemase JCQ04_RS07855 PF17760 UvrA interaction domain JCQ04_RS07855 PF17755 UvrA DNA-binding domain JCQ04_RS07855 PF00005 ABC transporter JCQ04_RS07860 PF17757 UvrB interaction domain JCQ04_RS07860 PF04851 Type III restriction enzyme, res subunit JCQ04_RS07860 PF12344 Ultra-violet resistance protein B JCQ04_RS07860 PF02151 UvrB/uvrC motif JCQ04_RS07860 PF00271 Helicase conserved C-terminal domain JCQ04_RS07865 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS07870 PF00005 ABC transporter JCQ04_RS07875 PF01556 DnaJ C terminal domain JCQ04_RS07875 PF00684 DnaJ central domain JCQ04_RS07875 PF00226 DnaJ domain JCQ04_RS07880 PF00012 Hsp70 protein JCQ04_RS07885 PF01025 GrpE JCQ04_RS07890 PF01628 HrcA protein C terminal domain JCQ04_RS07895 PF06969 HemN C-terminal domain JCQ04_RS07895 PF04055 Radical SAM superfamily JCQ04_RS07905 PF01610 Transposase JCQ04_RS07905 PF13683 Integrase core domain JCQ04_RS07940 PF01965 DJ-1/PfpI family JCQ04_RS07950 PF17676 LD-carboxypeptidase C-terminal domain JCQ04_RS07950 PF02016 LD-carboxypeptidase N-terminal domain JCQ04_RS07960 PF08818 Domain of unknown function (DU1801) JCQ04_RS07965 PF12728 Helix-turn-helix domain JCQ04_RS07970 PF06800 Sugar transport protein JCQ04_RS07985 PF06574 FAD synthetase JCQ04_RS07985 PF01687 Riboflavin kinase JCQ04_RS07990 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCQ04_RS07990 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCQ04_RS07995 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JCQ04_RS07995 PF09364 XFP N-terminal domain JCQ04_RS07995 PF09363 XFP C-terminal domain JCQ04_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS08005 PF02033 Ribosome-binding factor A JCQ04_RS08010 PF04760 Translation initiation factor IF-2, N-terminal region JCQ04_RS08010 PF00009 Elongation factor Tu GTP binding domain JCQ04_RS08010 PF11987 Translation-initiation factor 2 JCQ04_RS08015 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JCQ04_RS08020 PF04296 Protein of unknown function (DUF448) JCQ04_RS08025 PF08529 NusA N-terminal domain JCQ04_RS08025 PF00575 S1 RNA binding domain JCQ04_RS08025 PF13184 NusA-like KH domain JCQ04_RS08030 PF17384 RimP C-terminal SH3 domain JCQ04_RS08030 PF02576 RimP N-terminal domain JCQ04_RS08035 PF00929 Exonuclease JCQ04_RS08035 PF14579 Helix-hairpin-helix motif JCQ04_RS08035 PF02811 PHP domain JCQ04_RS08035 PF11490 DNA polymerase III polC-type N-terminus II JCQ04_RS08035 PF14480 DNA polymerase III polC-type N-terminus I JCQ04_RS08035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCQ04_RS08035 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCQ04_RS08040 PF03129 Anticodon binding domain JCQ04_RS08040 PF04073 Aminoacyl-tRNA editing domain JCQ04_RS08040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCQ04_RS08045 PF17820 PDZ domain JCQ04_RS08045 PF02163 Peptidase family M50 JCQ04_RS08055 PF01255 Putative undecaprenyl diphosphate synthase JCQ04_RS08065 PF01765 Ribosome recycling factor JCQ04_RS08070 PF00696 Amino acid kinase family JCQ04_RS08075 PF00889 Elongation factor TS JCQ04_RS08080 PF00318 Ribosomal protein S2 JCQ04_RS08085 PF01316 Arginine repressor, DNA binding domain JCQ04_RS08085 PF02863 Arginine repressor, C-terminal domain JCQ04_RS08090 PF00266 Aminotransferase class-V JCQ04_RS08095 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS08100 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS08105 PF05746 DALR anticodon binding domain JCQ04_RS08105 PF03485 Arginyl tRNA synthetase N terminal domain JCQ04_RS08105 PF00750 tRNA synthetases class I (R) JCQ04_RS08110 PF00696 Amino acid kinase family JCQ04_RS08115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCQ04_RS08115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCQ04_RS08125 PF13545 Crp-like helix-turn-helix domain JCQ04_RS08125 PF00027 Cyclic nucleotide-binding domain JCQ04_RS08135 PF00814 Glycoprotease family JCQ04_RS08140 PF00583 Acetyltransferase (GNAT) family JCQ04_RS08145 PF00583 Acetyltransferase (GNAT) family JCQ04_RS08150 PF00814 Glycoprotease family JCQ04_RS08160 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS08165 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JCQ04_RS08165 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JCQ04_RS08170 PF16363 GDP-mannose 4,6 dehydratase JCQ04_RS08185 PF04343 Protein of unknown function, DUF488 JCQ04_RS08190 PF00581 Rhodanese-like domain JCQ04_RS08195 PF00480 ROK family JCQ04_RS08210 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCQ04_RS08215 PF01032 FecCD transport family JCQ04_RS08220 PF01032 FecCD transport family JCQ04_RS08225 PF00005 ABC transporter JCQ04_RS08235 PF00186 Dihydrofolate reductase JCQ04_RS08240 PF00471 Ribosomal protein L33 JCQ04_RS08245 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JCQ04_RS08250 PF00733 Asparagine synthase JCQ04_RS08250 PF13537 Glutamine amidotransferase domain JCQ04_RS08255 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCQ04_RS08265 PF00440 Bacterial regulatory proteins, tetR family JCQ04_RS08265 PF08359 YsiA-like protein, C-terminal region JCQ04_RS08285 PF02627 Carboxymuconolactone decarboxylase family JCQ04_RS08300 PF03009 Glycerophosphoryl diester phosphodiesterase family JCQ04_RS08330 PF00342 Phosphoglucose isomerase JCQ04_RS08335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCQ04_RS08335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCQ04_RS08345 PF04073 Aminoacyl-tRNA editing domain JCQ04_RS08350 PF01487 Type I 3-dehydroquinase JCQ04_RS08355 PF10672 S-adenosylmethionine-dependent methyltransferase JCQ04_RS08355 PF17785 PUA-like domain JCQ04_RS08360 PF00884 Sulfatase JCQ04_RS08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS08375 PF00672 HAMP domain JCQ04_RS08375 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS08380 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS08380 PF00072 Response regulator receiver domain JCQ04_RS08405 PF00872 Transposase, Mutator family JCQ04_RS08420 PF00872 Transposase, Mutator family JCQ04_RS08435 PF13185 GAF domain JCQ04_RS08440 PF03306 Alpha-acetolactate decarboxylase JCQ04_RS08445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCQ04_RS08445 PF00205 Thiamine pyrophosphate enzyme, central domain JCQ04_RS08445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCQ04_RS08455 PF00872 Transposase, Mutator family JCQ04_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS08475 PF03466 LysR substrate binding domain JCQ04_RS08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS08480 PF13411 MerR HTH family regulatory protein JCQ04_RS08485 PF07690 Major Facilitator Superfamily JCQ04_RS08540 PF00589 Phage integrase family JCQ04_RS08540 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS08565 PF03050 Transposase IS66 family JCQ04_RS08565 PF13007 Transposase C of IS166 homeodomain JCQ04_RS08565 PF13005 zinc-finger binding domain of transposase IS66 JCQ04_RS08565 PF13817 IS66 C-terminal element JCQ04_RS08585 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCQ04_RS08585 PF08244 Glycosyl hydrolases family 32 C terminal JCQ04_RS08595 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS08595 PF03610 PTS system fructose IIA component JCQ04_RS08600 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS08605 PF03609 PTS system sorbose-specific iic component JCQ04_RS08610 PF03610 PTS system fructose IIA component JCQ04_RS08610 PF00874 PRD domain JCQ04_RS08610 PF00158 Sigma-54 interaction domain JCQ04_RS08615 PF00480 ROK family JCQ04_RS08620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS08625 PF00367 phosphotransferase system, EIIB JCQ04_RS08625 PF02378 Phosphotransferase system, EIIC JCQ04_RS08635 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS08645 PF12802 MarR family JCQ04_RS08660 PF01609 Transposase DDE domain JCQ04_RS08670 PF01695 IstB-like ATP binding protein JCQ04_RS08680 PF00877 NlpC/P60 family JCQ04_RS08695 PF00872 Transposase, Mutator family JCQ04_RS08730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCQ04_RS08730 PF01348 Type II intron maturase JCQ04_RS08740 PF18106 Rolling Circle replication initiation protein N-terminal domain JCQ04_RS08740 PF02486 Replication initiation factor JCQ04_RS08750 PF00145 C-5 cytosine-specific DNA methylase JCQ04_RS08785 PF01245 Ribosomal protein L19 JCQ04_RS08790 PF01746 tRNA (Guanine-1)-methyltransferase JCQ04_RS08795 PF01782 RimM N-terminal domain JCQ04_RS08795 PF05239 PRC-barrel domain JCQ04_RS08810 PF00886 Ribosomal protein S16 JCQ04_RS08815 PF03358 NADPH-dependent FMN reductase JCQ04_RS08820 PF01872 RibD C-terminal domain JCQ04_RS08825 PF00117 Glutamine amidotransferase class-I JCQ04_RS08825 PF03352 Methyladenine glycosylase JCQ04_RS08825 PF00958 GMP synthase C terminal domain JCQ04_RS08825 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS08825 PF13302 Acetyltransferase (GNAT) domain JCQ04_RS08830 PF02978 Signal peptide binding domain JCQ04_RS08830 PF00448 SRP54-type protein, GTPase domain JCQ04_RS08830 PF02881 SRP54-type protein, helical bundle domain JCQ04_RS08835 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JCQ04_RS08845 PF00072 Response regulator receiver domain JCQ04_RS08845 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS08850 PF16736 Single Cache-like JCQ04_RS08850 PF00989 PAS fold JCQ04_RS08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS08850 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS08860 PF13683 Integrase core domain JCQ04_RS08860 PF01610 Transposase JCQ04_RS08865 PF12849 PBP superfamily domain JCQ04_RS08890 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JCQ04_RS08910 PF00872 Transposase, Mutator family JCQ04_RS08950 PF07726 ATPase family associated with various cellular activities (AAA) JCQ04_RS08950 PF17863 AAA lid domain JCQ04_RS08975 PF00403 Heavy-metal-associated domain JCQ04_RS08980 PF00403 Heavy-metal-associated domain JCQ04_RS08985 PF03965 Penicillinase repressor JCQ04_RS08995 PF13520 Amino acid permease JCQ04_RS09000 PF00403 Heavy-metal-associated domain JCQ04_RS09015 PF13472 GDSL-like Lipase/Acylhydrolase family JCQ04_RS09020 PF00152 tRNA synthetases class II (D, K and N) JCQ04_RS09020 PF01336 OB-fold nucleic acid binding domain JCQ04_RS09025 PF00155 Aminotransferase class I and II JCQ04_RS09035 PF13307 Helicase C-terminal domain JCQ04_RS09035 PF04851 Type III restriction enzyme, res subunit JCQ04_RS09035 PF00929 Exonuclease JCQ04_RS09040 PF00313 'Cold-shock' DNA-binding domain JCQ04_RS09060 PF07943 Penicillin-binding protein 5, C-terminal domain JCQ04_RS09060 PF00768 D-alanyl-D-alanine carboxypeptidase JCQ04_RS09070 PF00654 Voltage gated chloride channel JCQ04_RS09085 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCQ04_RS09085 PF00588 SpoU rRNA Methylase family JCQ04_RS09090 PF00708 Acylphosphatase JCQ04_RS09095 PF02096 60Kd inner membrane protein JCQ04_RS09100 PF01791 DeoC/LacD family aldolase JCQ04_RS09105 PF03050 Transposase IS66 family JCQ04_RS09105 PF13005 zinc-finger binding domain of transposase IS66 JCQ04_RS09105 PF13007 Transposase C of IS166 homeodomain JCQ04_RS09105 PF13817 IS66 C-terminal element JCQ04_RS09145 PF00534 Glycosyl transferases group 1 JCQ04_RS09145 PF13439 Glycosyltransferase Family 4 JCQ04_RS09165 PF00535 Glycosyl transferase family 2 JCQ04_RS09170 PF00534 Glycosyl transferases group 1 JCQ04_RS09170 PF13439 Glycosyltransferase Family 4 JCQ04_RS09185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCQ04_RS09185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCQ04_RS09185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCQ04_RS09190 PF02397 Bacterial sugar transferase JCQ04_RS09200 PF13614 AAA domain JCQ04_RS09205 PF13807 G-rich domain on putative tyrosine kinase JCQ04_RS09205 PF02706 Chain length determinant protein JCQ04_RS09210 PF03816 Cell envelope-related transcriptional attenuator domain JCQ04_RS09220 PF02092 Glycyl-tRNA synthetase beta subunit JCQ04_RS09220 PF05746 DALR anticodon binding domain JCQ04_RS09225 PF02091 Glycyl-tRNA synthetase alpha subunit JCQ04_RS09230 PF11967 Recombination protein O N terminal JCQ04_RS09230 PF02565 Recombination protein O C terminal JCQ04_RS09235 PF07650 KH domain JCQ04_RS09235 PF01926 50S ribosome-binding GTPase JCQ04_RS09240 PF01219 Prokaryotic diacylglycerol kinase JCQ04_RS09245 PF02130 Uncharacterized protein family UPF0054 JCQ04_RS09250 PF07698 7TM receptor with intracellular HD hydrolase JCQ04_RS09250 PF07697 7TM-HD extracellular JCQ04_RS09250 PF01966 HD domain JCQ04_RS09255 PF02562 PhoH-like protein JCQ04_RS09260 PF05525 Branched-chain amino acid transport protein JCQ04_RS09265 PF09424 Yqey-like protein JCQ04_RS09270 PF01165 Ribosomal protein S21 JCQ04_RS09275 PF01475 Ferric uptake regulator family JCQ04_RS09280 PF03618 Kinase/pyrophosphorylase JCQ04_RS09285 PF01022 Bacterial regulatory protein, arsR family JCQ04_RS09290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCQ04_RS09290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCQ04_RS09290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCQ04_RS09290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCQ04_RS09295 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS09300 PF00232 Glycosyl hydrolase family 1 JCQ04_RS09305 PF11975 Family 4 glycosyl hydrolase C-terminal domain JCQ04_RS09305 PF02056 Family 4 glycosyl hydrolase JCQ04_RS09310 PF01380 SIS domain JCQ04_RS09310 PF01418 Helix-turn-helix domain, rpiR family JCQ04_RS09315 PF00367 phosphotransferase system, EIIB JCQ04_RS09315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS09315 PF02378 Phosphotransferase system, EIIC JCQ04_RS09325 PF00664 ABC transporter transmembrane region JCQ04_RS09325 PF00005 ABC transporter JCQ04_RS09330 PF00005 ABC transporter JCQ04_RS09330 PF00664 ABC transporter transmembrane region JCQ04_RS09335 PF03672 Uncharacterised protein family (UPF0154) JCQ04_RS09340 PF01566 Natural resistance-associated macrophage protein JCQ04_RS09350 PF01261 Xylose isomerase-like TIM barrel JCQ04_RS09355 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS09355 PF00912 Transglycosylase JCQ04_RS09360 PF00872 Transposase, Mutator family JCQ04_RS09395 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS09400 PF00557 Metallopeptidase family M24 JCQ04_RS09400 PF01321 Creatinase/Prolidase N-terminal domain JCQ04_RS09405 PF12732 YtxH-like protein JCQ04_RS09415 PF00483 Nucleotidyl transferase JCQ04_RS09420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCQ04_RS09420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCQ04_RS09425 PF01790 Prolipoprotein diacylglyceryl transferase JCQ04_RS09430 PF07475 HPr Serine kinase C-terminal domain JCQ04_RS09430 PF02603 HPr Serine kinase N terminus JCQ04_RS09435 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JCQ04_RS09460 PF01895 PhoU domain JCQ04_RS09465 PF00005 ABC transporter JCQ04_RS09470 PF00005 ABC transporter JCQ04_RS09475 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS09485 PF12849 PBP superfamily domain JCQ04_RS09490 PF13396 Phospholipase_D-nuclease N-terminal JCQ04_RS09490 PF13091 PLD-like domain JCQ04_RS09495 PF02687 FtsX-like permease family JCQ04_RS09495 PF18075 FtsX extracellular domain JCQ04_RS09500 PF00005 ABC transporter JCQ04_RS09510 PF02810 SEC-C motif JCQ04_RS09510 PF07517 SecA DEAD-like domain JCQ04_RS09510 PF01043 SecA preprotein cross-linking domain JCQ04_RS09510 PF07516 SecA Wing and Scaffold domain JCQ04_RS09515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCQ04_RS09515 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JCQ04_RS09525 PF00271 Helicase conserved C-terminal domain JCQ04_RS09525 PF04851 Type III restriction enzyme, res subunit JCQ04_RS09530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS09540 PF01205 Uncharacterized protein family UPF0029 JCQ04_RS09540 PF09186 Domain of unknown function (DUF1949) JCQ04_RS09545 PF07702 UTRA domain JCQ04_RS09545 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS09570 PF00480 ROK family JCQ04_RS09580 PF01809 Putative membrane protein insertion efficiency factor JCQ04_RS09590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCQ04_RS09605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JCQ04_RS09605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCQ04_RS09610 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCQ04_RS09610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCQ04_RS09615 PF00231 ATP synthase JCQ04_RS09620 PF00306 ATP synthase alpha/beta chain, C terminal domain JCQ04_RS09620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCQ04_RS09620 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCQ04_RS09625 PF00213 ATP synthase delta (OSCP) subunit JCQ04_RS09630 PF00430 ATP synthase B/B' CF(0) JCQ04_RS09635 PF00137 ATP synthase subunit C JCQ04_RS09640 PF00119 ATP synthase A chain JCQ04_RS09650 PF12146 Serine aminopeptidase, S33 JCQ04_RS09655 PF03840 Preprotein translocase SecG subunit JCQ04_RS09660 PF14542 GCN5-related N-acetyl-transferase JCQ04_RS09670 PF01156 Inosine-uridine preferring nucleoside hydrolase JCQ04_RS09680 PF07687 Peptidase dimerisation domain JCQ04_RS09680 PF01546 Peptidase family M20/M25/M40 JCQ04_RS09685 PF03952 Enolase, N-terminal domain JCQ04_RS09685 PF00113 Enolase, C-terminal TIM barrel domain JCQ04_RS09690 PF00121 Triosephosphate isomerase JCQ04_RS09695 PF00162 Phosphoglycerate kinase JCQ04_RS09700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCQ04_RS09700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCQ04_RS09705 PF04198 Putative sugar-binding domain JCQ04_RS09710 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCQ04_RS09710 PF04552 Sigma-54, DNA binding domain JCQ04_RS09710 PF04963 Sigma-54 factor, core binding domain JCQ04_RS09720 PF01522 Polysaccharide deacetylase JCQ04_RS09725 PF11738 Protein of unknown function (DUF3298) JCQ04_RS09725 PF13739 Deacetylase PdaC JCQ04_RS09730 PF08281 Sigma-70, region 4 JCQ04_RS09730 PF04542 Sigma-70 region 2 JCQ04_RS09735 PF05066 HB1, ASXL, restriction endonuclease HTH domain JCQ04_RS09745 PF03099 Biotin/lipoate A/B protein ligase family JCQ04_RS09750 PF01966 HD domain JCQ04_RS09760 PF00293 NUDIX domain JCQ04_RS09765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCQ04_RS09770 PF02567 Phenazine biosynthesis-like protein JCQ04_RS09775 PF02423 Ornithine cyclodeaminase/mu-crystallin family JCQ04_RS09780 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS09780 PF00155 Aminotransferase class I and II JCQ04_RS09785 PF02386 Cation transport protein JCQ04_RS09790 PF01813 ATP synthase subunit D JCQ04_RS09795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCQ04_RS09795 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCQ04_RS09800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCQ04_RS09800 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCQ04_RS09800 PF16886 ATPsynthase alpha/beta subunit N-term extension JCQ04_RS09805 PF01990 ATP synthase (F/14-kDa) subunit JCQ04_RS09810 PF01992 ATP synthase (C/AC39) subunit JCQ04_RS09820 PF00137 ATP synthase subunit C JCQ04_RS09825 PF01496 V-type ATPase 116kDa subunit family JCQ04_RS09835 PF07722 Peptidase C26 JCQ04_RS09840 PF06874 Firmicute fructose-1,6-bisphosphatase JCQ04_RS09850 PF13732 Domain of unknown function (DUF4162) JCQ04_RS09850 PF00005 ABC transporter JCQ04_RS09855 PF02151 UvrB/uvrC motif JCQ04_RS09855 PF01541 GIY-YIG catalytic domain JCQ04_RS09855 PF08459 UvrC Helix-hairpin-helix N-terminal JCQ04_RS09865 PF00085 Thioredoxin JCQ04_RS09870 PF01713 Smr domain JCQ04_RS09870 PF00488 MutS domain V JCQ04_RS09885 PF11858 Domain of unknown function (DUF3378) JCQ04_RS09885 PF01351 Ribonuclease HII JCQ04_RS09890 PF01520 N-acetylmuramoyl-L-alanine amidase JCQ04_RS09890 PF00395 S-layer homology domain JCQ04_RS09900 PF00005 ABC transporter JCQ04_RS09910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS09910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS09940 PF01070 FMN-dependent dehydrogenase JCQ04_RS09950 PF00390 Malic enzyme, N-terminal domain JCQ04_RS09950 PF03949 Malic enzyme, NAD binding domain JCQ04_RS09955 PF03390 2-hydroxycarboxylate transporter family JCQ04_RS09990 PF04860 Phage portal protein JCQ04_RS10070 PF00589 Phage integrase family JCQ04_RS10070 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS10075 PF06949 Protein of unknown function (DUF1292) JCQ04_RS10080 PF03652 Holliday junction resolvase JCQ04_RS10085 PF06135 IreB regulatory phosphoprotein JCQ04_RS10115 PF00005 ABC transporter JCQ04_RS10125 PF09323 Domain of unknown function (DUF1980) JCQ04_RS10130 PF03773 Predicted permease JCQ04_RS10135 PF00085 Thioredoxin JCQ04_RS10140 PF06971 Putative DNA-binding protein N-terminus JCQ04_RS10140 PF02629 CoA binding domain JCQ04_RS10145 PF00005 ABC transporter JCQ04_RS10145 PF16326 ABC transporter C-terminal domain JCQ04_RS10145 PF12848 ABC transporter JCQ04_RS10150 PF07470 Glycosyl Hydrolase Family 88 JCQ04_RS10160 PF07470 Glycosyl Hydrolase Family 88 JCQ04_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS10180 PF12833 Helix-turn-helix domain JCQ04_RS10180 PF07883 Cupin domain JCQ04_RS10185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS10185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS10200 PF13167 GTP-binding GTPase N-terminal JCQ04_RS10200 PF01926 50S ribosome-binding GTPase JCQ04_RS10200 PF16360 GTP-binding GTPase Middle Region JCQ04_RS10210 PF03009 Glycerophosphoryl diester phosphodiesterase family JCQ04_RS10220 PF00574 Clp protease JCQ04_RS10225 PF00132 Bacterial transferase hexapeptide (six repeats) JCQ04_RS10235 PF00005 ABC transporter JCQ04_RS10235 PF00664 ABC transporter transmembrane region JCQ04_RS10240 PF00005 ABC transporter JCQ04_RS10240 PF00664 ABC transporter transmembrane region JCQ04_RS10245 PF07288 Protein of unknown function (DUF1447) JCQ04_RS10250 PF17770 Ribonuclease J C-terminal domain JCQ04_RS10250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCQ04_RS10250 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS10260 PF00313 'Cold-shock' DNA-binding domain JCQ04_RS10295 PF00872 Transposase, Mutator family JCQ04_RS10350 PF10145 Phage-related minor tail protein JCQ04_RS10350 PF01464 Transglycosylase SLT domain JCQ04_RS10350 PF01551 Peptidase family M23 JCQ04_RS10495 PF11638 DnaA N-terminal domain JCQ04_RS10495 PF08299 Bacterial dnaA protein helix-turn-helix JCQ04_RS10495 PF00308 Bacterial dnaA protein JCQ04_RS10505 PF03837 RecT family JCQ04_RS10510 PF09588 YqaJ-like viral recombinase domain JCQ04_RS10550 PF01381 Helix-turn-helix JCQ04_RS10560 PF07508 Recombinase JCQ04_RS10560 PF13408 Recombinase zinc beta ribbon domain JCQ04_RS10560 PF00239 Resolvase, N terminal domain JCQ04_RS10565 PF04002 RadC-like JAB domain JCQ04_RS10570 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS10575 PF02875 Mur ligase family, glutamate ligase domain JCQ04_RS10575 PF08245 Mur ligase middle domain JCQ04_RS10580 PF08264 Anticodon-binding domain of tRNA JCQ04_RS10580 PF00133 tRNA synthetases class I (I, L, M and V) JCQ04_RS10580 PF10458 Valyl tRNA synthetase tRNA binding arm JCQ04_RS10585 PF06971 Putative DNA-binding protein N-terminus JCQ04_RS10585 PF02629 CoA binding domain JCQ04_RS10590 PF02568 Thiamine biosynthesis protein (ThiI) JCQ04_RS10590 PF02926 THUMP domain JCQ04_RS10595 PF00266 Aminotransferase class-V JCQ04_RS10605 PF06160 Septation ring formation regulator, EzrA JCQ04_RS10620 PF01904 Protein of unknown function DUF72 JCQ04_RS10625 PF00710 Asparaginase, N-terminal JCQ04_RS10625 PF17763 Glutaminase/Asparaginase C-terminal domain JCQ04_RS10635 PF03881 Fructosamine kinase JCQ04_RS10640 PF03051 Peptidase C1-like family JCQ04_RS10690 PF13007 Transposase C of IS166 homeodomain JCQ04_RS10690 PF13005 zinc-finger binding domain of transposase IS66 JCQ04_RS10690 PF13817 IS66 C-terminal element JCQ04_RS10690 PF03050 Transposase IS66 family JCQ04_RS10720 PF00575 S1 RNA binding domain JCQ04_RS10725 PF00155 Aminotransferase class I and II JCQ04_RS10730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCQ04_RS10740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS10745 PF04608 Phosphatidylglycerophosphatase A JCQ04_RS10755 PF13344 Haloacid dehalogenase-like hydrolase JCQ04_RS10760 PF06265 Protein of unknown function (DUF1027) JCQ04_RS10765 PF02872 5'-nucleotidase, C-terminal domain JCQ04_RS10780 PF14437 MafB19-like deaminase JCQ04_RS10785 PF13556 PucR C-terminal helix-turn-helix domain JCQ04_RS10795 PF01189 16S rRNA methyltransferase RsmB/F JCQ04_RS10795 PF17126 RsmF rRNA methyltransferase first C-terminal domain JCQ04_RS10795 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JCQ04_RS10810 PF04298 Putative neutral zinc metallopeptidase JCQ04_RS10815 PF08274 PhnA Zinc-Ribbon JCQ04_RS10815 PF03831 PhnA domain JCQ04_RS10820 PF02272 DHHA1 domain JCQ04_RS10820 PF01368 DHH family JCQ04_RS10825 PF00571 CBS domain JCQ04_RS10825 PF03061 Thioesterase superfamily JCQ04_RS10825 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS10825 PF07085 DRTGG domain JCQ04_RS10830 PF12706 Beta-lactamase superfamily domain JCQ04_RS10845 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS10845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCQ04_RS10845 PF17770 Ribonuclease J C-terminal domain JCQ04_RS10850 PF02687 FtsX-like permease family JCQ04_RS10850 PF12704 MacB-like periplasmic core domain JCQ04_RS10855 PF00005 ABC transporter JCQ04_RS10865 PF01979 Amidohydrolase family JCQ04_RS10870 PF03606 C4-dicarboxylate anaerobic carrier JCQ04_RS10875 PF13580 SIS domain JCQ04_RS10885 PF00483 Nucleotidyl transferase JCQ04_RS10890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCQ04_RS10890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCQ04_RS10895 PF13580 SIS domain JCQ04_RS10900 PF01380 SIS domain JCQ04_RS10905 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS10910 PF03609 PTS system sorbose-specific iic component JCQ04_RS10915 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS10925 PF00158 Sigma-54 interaction domain JCQ04_RS10925 PF00874 PRD domain JCQ04_RS10935 PF00664 ABC transporter transmembrane region JCQ04_RS10935 PF00005 ABC transporter JCQ04_RS10940 PF00005 ABC transporter JCQ04_RS10940 PF00664 ABC transporter transmembrane region JCQ04_RS10950 PF02142 MGS-like domain JCQ04_RS10955 PF00005 ABC transporter JCQ04_RS10955 PF03459 TOBE domain JCQ04_RS10955 PF17912 MalK OB fold domain JCQ04_RS10965 PF00398 Ribosomal RNA adenine dimethylase JCQ04_RS10970 PF13331 Domain of unknown function (DUF4093) JCQ04_RS10970 PF01751 Toprim domain JCQ04_RS10975 PF01026 TatD related DNase JCQ04_RS10980 PF13520 Amino acid permease JCQ04_RS10990 PF09334 tRNA synthetases class I (M) JCQ04_RS10990 PF01588 Putative tRNA binding domain JCQ04_RS10990 PF08264 Anticodon-binding domain of tRNA JCQ04_RS11005 PF07282 Putative transposase DNA-binding domain JCQ04_RS11005 PF01385 Probable transposase JCQ04_RS11005 PF12323 Helix-turn-helix domain JCQ04_RS11010 PF00005 ABC transporter JCQ04_RS11010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCQ04_RS11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCQ04_RS11015 PF00005 ABC transporter JCQ04_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11020 PF12911 N-terminal TM domain of oligopeptide transport permease C JCQ04_RS11025 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCQ04_RS11040 PF00583 Acetyltransferase (GNAT) family JCQ04_RS11050 PF04055 Radical SAM superfamily JCQ04_RS11055 PF01580 FtsK/SpoIIIE family JCQ04_RS11055 PF09397 Ftsk gamma domain JCQ04_RS11055 PF17854 FtsK alpha domain JCQ04_RS11060 PF00232 Glycosyl hydrolase family 1 JCQ04_RS11065 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCQ04_RS11070 PF00005 ABC transporter JCQ04_RS11075 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11085 PF05737 Collagen binding domain JCQ04_RS11085 PF17802 Prealbumin-like fold domain JCQ04_RS11085 PF05738 Cna protein B-type domain JCQ04_RS11090 PF00872 Transposase, Mutator family JCQ04_RS11125 PF07859 alpha/beta hydrolase fold JCQ04_RS11130 PF00464 Serine hydroxymethyltransferase JCQ04_RS11135 PF01300 Telomere recombination JCQ04_RS11135 PF03481 Putative GTP-binding controlling metal-binding JCQ04_RS11145 PF17827 PrmC N-terminal domain JCQ04_RS11145 PF05175 Methyltransferase small domain JCQ04_RS11150 PF00472 RF-1 domain JCQ04_RS11150 PF03462 PCRF domain JCQ04_RS11155 PF00265 Thymidine kinase JCQ04_RS11165 PF01209 ubiE/COQ5 methyltransferase family JCQ04_RS11170 PF10502 Signal peptidase, peptidase S26 JCQ04_RS11185 PF02677 Epoxyqueuosine reductase QueH JCQ04_RS11190 PF02386 Cation transport protein JCQ04_RS11195 PF08353 Domain of unknown function (DUF1727) JCQ04_RS11195 PF08245 Mur ligase middle domain JCQ04_RS11200 PF07685 CobB/CobQ-like glutamine amidotransferase domain JCQ04_RS11205 PF08125 Mannitol dehydrogenase C-terminal domain JCQ04_RS11205 PF01232 Mannitol dehydrogenase Rossmann domain JCQ04_RS11210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS11215 PF02378 Phosphotransferase system, EIIC JCQ04_RS11215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS11220 PF00005 ABC transporter JCQ04_RS11230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS11235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS11235 PF05043 Mga helix-turn-helix domain JCQ04_RS11235 PF08279 HTH domain JCQ04_RS11240 PF02378 Phosphotransferase system, EIIC JCQ04_RS11240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS11245 PF01238 Phosphomannose isomerase type I JCQ04_RS11250 PF00144 Beta-lactamase JCQ04_RS11260 PF00005 ABC transporter JCQ04_RS11260 PF00664 ABC transporter transmembrane region JCQ04_RS11265 PF00664 ABC transporter transmembrane region JCQ04_RS11265 PF00005 ABC transporter JCQ04_RS11280 PF02525 Flavodoxin-like fold JCQ04_RS11290 PF01594 AI-2E family transporter JCQ04_RS11300 PF10282 Lactonase, 7-bladed beta-propeller JCQ04_RS11315 PF00884 Sulfatase JCQ04_RS11325 PF11762 L-arabinose isomerase C-terminal domain JCQ04_RS11325 PF02610 L-arabinose isomerase JCQ04_RS11330 PF00596 Class II Aldolase and Adducin N-terminal domain JCQ04_RS11340 PF00083 Sugar (and other) transporter JCQ04_RS11345 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS11350 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JCQ04_RS11350 PF04616 Glycosyl hydrolases family 43 JCQ04_RS11355 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCQ04_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11370 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11380 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JCQ04_RS11390 PF02540 NAD synthase JCQ04_RS11395 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JCQ04_RS11395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCQ04_RS11395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCQ04_RS11405 PF07739 TipAS antibiotic-recognition domain JCQ04_RS11405 PF13411 MerR HTH family regulatory protein JCQ04_RS11410 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS11410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCQ04_RS11420 PF00872 Transposase, Mutator family JCQ04_RS11440 PF00118 TCP-1/cpn60 chaperonin family JCQ04_RS11445 PF00166 Chaperonin 10 Kd subunit JCQ04_RS11455 PF02378 Phosphotransferase system, EIIC JCQ04_RS11460 PF13460 NAD(P)H-binding JCQ04_RS11465 PF00753 Metallo-beta-lactamase superfamily JCQ04_RS11480 PF00672 HAMP domain JCQ04_RS11480 PF13426 PAS domain JCQ04_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS11480 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS11485 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS11485 PF00072 Response regulator receiver domain JCQ04_RS11490 PF02645 Uncharacterised protein, DegV family COG1307 JCQ04_RS11520 PF01721 Class II bacteriocin JCQ04_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS11530 PF00571 CBS domain JCQ04_RS11530 PF00005 ABC transporter JCQ04_RS11535 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS11535 PF07729 FCD domain JCQ04_RS11545 PF17910 FeoB cytosolic helical domain JCQ04_RS11545 PF02421 Ferrous iron transport protein B JCQ04_RS11545 PF07664 Ferrous iron transport protein B C terminus JCQ04_RS11545 PF07670 Nucleoside recognition JCQ04_RS11555 PF00462 Glutaredoxin JCQ04_RS11560 PF08343 Ribonucleotide reductase N-terminal JCQ04_RS11560 PF00317 Ribonucleotide reductase, all-alpha domain JCQ04_RS11560 PF02867 Ribonucleotide reductase, barrel domain JCQ04_RS11565 PF00268 Ribonucleotide reductase, small chain JCQ04_RS11570 PF01594 AI-2E family transporter JCQ04_RS11575 PF02308 MgtC family JCQ04_RS11580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JCQ04_RS11585 PF12848 ABC transporter JCQ04_RS11585 PF00005 ABC transporter JCQ04_RS11600 PF07690 Major Facilitator Superfamily JCQ04_RS11610 PF16320 Ribosomal protein L7/L12 dimerisation domain JCQ04_RS11610 PF00542 Ribosomal protein L7/L12 C-terminal domain JCQ04_RS11615 PF00466 Ribosomal protein L10 JCQ04_RS11620 PF00687 Ribosomal protein L1p/L10e family JCQ04_RS11625 PF03946 Ribosomal protein L11, N-terminal domain JCQ04_RS11625 PF00298 Ribosomal protein L11, RNA binding domain JCQ04_RS11630 PF01842 ACT domain JCQ04_RS11630 PF03315 Serine dehydratase beta chain JCQ04_RS11635 PF03313 Serine dehydratase alpha chain JCQ04_RS11640 PF01070 FMN-dependent dehydrogenase JCQ04_RS11645 PF00561 alpha/beta hydrolase fold JCQ04_RS11650 PF00467 KOW motif JCQ04_RS11650 PF02357 Transcription termination factor nusG JCQ04_RS11655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCQ04_RS11660 PF00471 Ribosomal protein L33 JCQ04_RS11675 PF00781 Diacylglycerol kinase catalytic domain JCQ04_RS11690 PF00005 ABC transporter JCQ04_RS11695 PF07730 Histidine kinase JCQ04_RS11700 PF00072 Response regulator receiver domain JCQ04_RS11700 PF00196 Bacterial regulatory proteins, luxR family JCQ04_RS11710 PF14490 Helix-hairpin-helix containing domain JCQ04_RS11710 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JCQ04_RS11710 PF13538 UvrD-like helicase C-terminal domain JCQ04_RS11720 PF00588 SpoU rRNA Methylase family JCQ04_RS11725 PF01209 ubiE/COQ5 methyltransferase family JCQ04_RS11730 PF03932 CutC family JCQ04_RS11735 PF00571 CBS domain JCQ04_RS11735 PF03448 MgtE intracellular N domain JCQ04_RS11735 PF01769 Divalent cation transporter JCQ04_RS11740 PF00849 RNA pseudouridylate synthase JCQ04_RS11745 PF01513 ATP-NAD kinase JCQ04_RS11750 PF04607 Region found in RelA / SpoT proteins JCQ04_RS11755 PF01928 CYTH domain JCQ04_RS11765 PF01610 Transposase JCQ04_RS11765 PF13683 Integrase core domain JCQ04_RS11770 PF01432 Peptidase family M3 JCQ04_RS11770 PF08439 Oligopeptidase F JCQ04_RS11780 PF05389 Negative regulator of genetic competence (MecA) JCQ04_RS11785 PF03960 ArsC family JCQ04_RS11795 PF00271 Helicase conserved C-terminal domain JCQ04_RS11795 PF00176 SNF2 family N-terminal domain JCQ04_RS11795 PF04434 SWIM zinc finger JCQ04_RS11800 PF13476 AAA domain JCQ04_RS11805 PF12320 Type 5 capsule protein repressor C-terminal domain JCQ04_RS11805 PF00149 Calcineurin-like phosphoesterase JCQ04_RS11810 PF01553 Acyltransferase JCQ04_RS11815 PF05175 Methyltransferase small domain JCQ04_RS11820 PF01541 GIY-YIG catalytic domain JCQ04_RS11825 PF01757 Acyltransferase family JCQ04_RS11830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JCQ04_RS11830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JCQ04_RS11835 PF02938 GAD domain JCQ04_RS11835 PF00152 tRNA synthetases class II (D, K and N) JCQ04_RS11835 PF01336 OB-fold nucleic acid binding domain JCQ04_RS11840 PF03129 Anticodon binding domain JCQ04_RS11840 PF13393 Histidyl-tRNA synthetase JCQ04_RS11845 PF00248 Aldo/keto reductase family JCQ04_RS11850 PF00067 Cytochrome P450 JCQ04_RS11855 PF02580 D-Tyr-tRNA(Tyr) deacylase JCQ04_RS11860 PF04607 Region found in RelA / SpoT proteins JCQ04_RS11860 PF02824 TGS domain JCQ04_RS11860 PF13291 ACT domain JCQ04_RS11865 PF04452 RNA methyltransferase JCQ04_RS11880 PF02245 Methylpurine-DNA glycosylase (MPG) JCQ04_RS11885 PF16193 AAA C-terminal domain JCQ04_RS11885 PF12002 MgsA AAA+ ATPase C terminal JCQ04_RS11885 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCQ04_RS11900 PF00582 Universal stress protein family JCQ04_RS11910 PF16326 ABC transporter C-terminal domain JCQ04_RS11910 PF12848 ABC transporter JCQ04_RS11910 PF00005 ABC transporter JCQ04_RS11915 PF00871 Acetokinase family JCQ04_RS11920 PF02384 N-6 DNA Methylase JCQ04_RS11945 PF07963 Prokaryotic N-terminal methylation motif JCQ04_RS11950 PF00482 Type II secretion system (T2SS), protein F JCQ04_RS11955 PF00437 Type II/IV secretion system protein JCQ04_RS11960 PF01979 Amidohydrolase family JCQ04_RS11960 PF13382 Adenine deaminase C-terminal domain JCQ04_RS11965 PF02390 Putative methyltransferase JCQ04_RS11975 PF05975 Bacterial ABC transporter protein EcsB JCQ04_RS11980 PF00005 ABC transporter JCQ04_RS11985 PF01230 HIT domain JCQ04_RS11995 PF13145 PPIC-type PPIASE domain JCQ04_RS12000 PF01966 HD domain JCQ04_RS12000 PF01336 OB-fold nucleic acid binding domain JCQ04_RS12005 PF13514 AAA domain JCQ04_RS12010 PF00149 Calcineurin-like phosphoesterase JCQ04_RS12045 PF04616 Glycosyl hydrolases family 43 JCQ04_RS12045 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JCQ04_RS12060 PF01738 Dienelactone hydrolase family JCQ04_RS12065 PF00295 Glycosyl hydrolases family 28 JCQ04_RS12070 PF07470 Glycosyl Hydrolase Family 88 JCQ04_RS12075 PF13416 Bacterial extracellular solute-binding protein JCQ04_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS12090 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS12095 PF17853 GGDEF-like domain JCQ04_RS12095 PF12833 Helix-turn-helix domain JCQ04_RS12100 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS12105 PF01232 Mannitol dehydrogenase Rossmann domain JCQ04_RS12105 PF08125 Mannitol dehydrogenase C-terminal domain JCQ04_RS12110 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JCQ04_RS12110 PF08666 SAF domain JCQ04_RS12115 PF02614 Glucuronate isomerase JCQ04_RS12120 PF00657 GDSL-like Lipase/Acylhydrolase JCQ04_RS12130 PF00005 ABC transporter JCQ04_RS12130 PF00664 ABC transporter transmembrane region JCQ04_RS12135 PF06133 Control of competence regulator ComK, YlbF/YmcA JCQ04_RS12140 PF00912 Transglycosylase JCQ04_RS12140 PF00905 Penicillin binding protein transpeptidase domain JCQ04_RS12145 PF00849 RNA pseudouridylate synthase JCQ04_RS12145 PF01479 S4 domain JCQ04_RS12150 PF00480 ROK family JCQ04_RS12155 PF09261 Alpha mannosidase middle domain JCQ04_RS12155 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 JCQ04_RS12155 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain JCQ04_RS12155 PF07748 Glycosyl hydrolases family 38 C-terminal domain JCQ04_RS12155 PF01074 Glycosyl hydrolases family 38 N-terminal domain JCQ04_RS12165 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS12175 PF00072 Response regulator receiver domain JCQ04_RS12175 PF12833 Helix-turn-helix domain JCQ04_RS12180 PF00672 HAMP domain JCQ04_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS12180 PF02743 Cache domain JCQ04_RS12180 PF06580 Histidine kinase JCQ04_RS12190 PF12010 Domain of unknown function (DUF3502) JCQ04_RS12195 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS12205 PF01479 S4 domain JCQ04_RS12205 PF00849 RNA pseudouridylate synthase JCQ04_RS12210 PF01943 Polysaccharide biosynthesis protein JCQ04_RS12210 PF14667 Polysaccharide biosynthesis C-terminal domain JCQ04_RS12220 PF02875 Mur ligase family, glutamate ligase domain JCQ04_RS12220 PF08245 Mur ligase middle domain JCQ04_RS12225 PF02378 Phosphotransferase system, EIIC JCQ04_RS12235 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JCQ04_RS12240 PF05043 Mga helix-turn-helix domain JCQ04_RS12240 PF00874 PRD domain JCQ04_RS12240 PF08279 HTH domain JCQ04_RS12240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCQ04_RS12245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCQ04_RS12285 PF06445 GyrI-like small molecule binding domain JCQ04_RS12285 PF13411 MerR HTH family regulatory protein JCQ04_RS12290 PF00005 ABC transporter JCQ04_RS12290 PF00664 ABC transporter transmembrane region JCQ04_RS12295 PF00664 ABC transporter transmembrane region JCQ04_RS12295 PF00005 ABC transporter JCQ04_RS12305 PF09334 tRNA synthetases class I (M) JCQ04_RS12305 PF08264 Anticodon-binding domain of tRNA JCQ04_RS12305 PF00133 tRNA synthetases class I (I, L, M and V) JCQ04_RS12305 PF13603 Leucyl-tRNA synthetase, Domain 2 JCQ04_RS12310 PF01476 LysM domain JCQ04_RS12310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS12315 PF01569 PAP2 superfamily JCQ04_RS12320 PF16199 Radical_SAM C-terminal domain JCQ04_RS12320 PF04055 Radical SAM superfamily JCQ04_RS12325 PF06962 Putative rRNA methylase JCQ04_RS12335 PF00872 Transposase, Mutator family JCQ04_RS12375 PF00589 Phage integrase family JCQ04_RS12375 PF14659 Phage integrase, N-terminal SAM-like domain JCQ04_RS12380 PF00872 Transposase, Mutator family JCQ04_RS12395 PF00664 ABC transporter transmembrane region JCQ04_RS12395 PF00005 ABC transporter JCQ04_RS12400 PF00005 ABC transporter JCQ04_RS12400 PF00664 ABC transporter transmembrane region JCQ04_RS12405 PF02909 Tetracyclin repressor-like, C-terminal domain JCQ04_RS12405 PF00440 Bacterial regulatory proteins, tetR family JCQ04_RS12415 PF07690 Major Facilitator Superfamily JCQ04_RS12420 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCQ04_RS12420 PF02772 S-adenosylmethionine synthetase, central domain JCQ04_RS12420 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCQ04_RS12430 PF01610 Transposase JCQ04_RS12430 PF13683 Integrase core domain JCQ04_RS12435 PF01636 Phosphotransferase enzyme family JCQ04_RS12440 PF00583 Acetyltransferase (GNAT) family JCQ04_RS12450 PF08241 Methyltransferase domain JCQ04_RS12475 PF00398 Ribosomal RNA adenine dimethylase JCQ04_RS12480 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) JCQ04_RS12485 PF13610 DDE domain JCQ04_RS12490 PF13610 DDE domain JCQ04_RS12510 PF00239 Resolvase, N terminal domain JCQ04_RS12510 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS12525 PF01022 Bacterial regulatory protein, arsR family JCQ04_RS12530 PF04892 VanZ like family JCQ04_RS12535 PF02557 D-alanyl-D-alanine carboxypeptidase JCQ04_RS12540 PF01427 D-ala-D-ala dipeptidase JCQ04_RS12545 PF07478 D-ala D-ala ligase C-terminus JCQ04_RS12545 PF01820 D-ala D-ala ligase N-terminus JCQ04_RS12550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCQ04_RS12550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCQ04_RS12705 PF01336 OB-fold nucleic acid binding domain JCQ04_RS12705 PF00152 tRNA synthetases class II (D, K and N) JCQ04_RS12710 PF01207 Dihydrouridine synthase (Dus) JCQ04_RS12715 PF01430 Hsp33 protein JCQ04_RS12720 PF01434 Peptidase family M41 JCQ04_RS12720 PF06480 FtsH Extracellular JCQ04_RS12720 PF17862 AAA+ lid domain JCQ04_RS12720 PF00004 ATPase family associated with various cellular activities (AAA) JCQ04_RS12725 PF00156 Phosphoribosyl transferase domain JCQ04_RS12730 PF01171 PP-loop family JCQ04_RS12730 PF11734 TilS substrate C-terminal domain JCQ04_RS12735 PF00575 S1 RNA binding domain JCQ04_RS12745 PF01479 S4 domain JCQ04_RS12750 PF01943 Polysaccharide biosynthesis protein JCQ04_RS12750 PF14667 Polysaccharide biosynthesis C-terminal domain JCQ04_RS12755 PF02559 CarD-like/TRCF domain JCQ04_RS12755 PF00270 DEAD/DEAH box helicase JCQ04_RS12755 PF17757 UvrB interaction domain JCQ04_RS12755 PF00271 Helicase conserved C-terminal domain JCQ04_RS12755 PF03461 TRCF domain JCQ04_RS12760 PF01195 Peptidyl-tRNA hydrolase JCQ04_RS12765 PF00056 lactate/malate dehydrogenase, NAD binding domain JCQ04_RS12765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCQ04_RS12775 PF01709 Transcriptional regulator JCQ04_RS12790 PF00877 NlpC/P60 family JCQ04_RS12800 PF04085 rod shape-determining protein MreC JCQ04_RS12810 PF00834 Ribulose-phosphate 3 epimerase family JCQ04_RS12815 PF03193 RsgA GTPase JCQ04_RS12815 PF16745 RsgA N-terminal domain JCQ04_RS12820 PF00069 Protein kinase domain JCQ04_RS12820 PF03793 PASTA domain JCQ04_RS12830 PF01189 16S rRNA methyltransferase RsmB/F JCQ04_RS12830 PF01029 NusB family JCQ04_RS12835 PF00551 Formyl transferase JCQ04_RS12835 PF02911 Formyl transferase, C-terminal domain JCQ04_RS12840 PF01327 Polypeptide deformylase JCQ04_RS12845 PF00271 Helicase conserved C-terminal domain JCQ04_RS12845 PF17764 3′ DNA-binding domain (3′BD) JCQ04_RS12845 PF18074 Primosomal protein N C-terminal domain JCQ04_RS12845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCQ04_RS12845 PF04851 Type III restriction enzyme, res subunit JCQ04_RS12850 PF01192 RNA polymerase Rpb6 JCQ04_RS12855 PF00625 Guanylate kinase JCQ04_RS12865 PF03755 YicC-like family, N-terminal region JCQ04_RS12865 PF08340 Domain of unknown function (DUF1732) JCQ04_RS12875 PF01734 Patatin-like phospholipase JCQ04_RS12885 PF09515 Thiamine transporter protein (Thia_YuaJ) JCQ04_RS12890 PF14572 Phosphoribosyl synthetase-associated domain JCQ04_RS12890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCQ04_RS12895 PF00483 Nucleotidyl transferase JCQ04_RS12895 PF00132 Bacterial transferase hexapeptide (six repeats) JCQ04_RS12900 PF09182 Bacterial purine repressor, N-terminal JCQ04_RS12900 PF00156 Phosphoribosyl transferase domain JCQ04_RS12905 PF00950 ABC 3 transport family JCQ04_RS12910 PF00005 ABC transporter JCQ04_RS12915 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCQ04_RS12915 PF01297 Zinc-uptake complex component A periplasmic JCQ04_RS12920 PF00288 GHMP kinases N terminal domain JCQ04_RS12920 PF08544 GHMP kinases C terminal JCQ04_RS12925 PF03706 Lysylphosphatidylglycerol synthase TM region JCQ04_RS12925 PF09924 Uncharacterised conserved protein (DUF2156) JCQ04_RS12930 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCQ04_RS12930 PF03807 NADP oxidoreductase coenzyme F420-dependent JCQ04_RS12940 PF12072 Domain of unknown function (DUF3552) JCQ04_RS12940 PF00013 KH domain JCQ04_RS12940 PF01966 HD domain JCQ04_RS12945 PF00154 recA bacterial DNA recombination protein JCQ04_RS12950 PF02464 Competence-damaged protein JCQ04_RS12950 PF18146 Damage-inducible protein CinA KH domain JCQ04_RS12950 PF00994 Probable molybdopterin binding domain JCQ04_RS12955 PF01066 CDP-alcohol phosphatidyltransferase JCQ04_RS12960 PF13464 Domain of unknown function (DUF4115) JCQ04_RS12965 PF00675 Insulinase (Peptidase family M16) JCQ04_RS12965 PF05193 Peptidase M16 inactive domain JCQ04_RS12970 PF05193 Peptidase M16 inactive domain JCQ04_RS12975 PF01741 Large-conductance mechanosensitive channel, MscL JCQ04_RS12980 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS12990 PF06257 Biofilm formation stimulator VEG JCQ04_RS13000 PF05991 YacP-like NYN domain JCQ04_RS13005 PF00588 SpoU rRNA Methylase family JCQ04_RS13005 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCQ04_RS13010 PF00636 Ribonuclease III domain JCQ04_RS13015 PF01406 tRNA synthetases class I (C) catalytic domain JCQ04_RS13015 PF09190 DALR domain JCQ04_RS13020 PF00132 Bacterial transferase hexapeptide (six repeats) JCQ04_RS13020 PF06426 Serine acetyltransferase, N-terminal JCQ04_RS13025 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCQ04_RS13035 PF18073 Rubredoxin metal binding domain JCQ04_RS13040 PF00692 dUTPase JCQ04_RS13050 PF00696 Amino acid kinase family JCQ04_RS13055 PF00171 Aldehyde dehydrogenase family JCQ04_RS13070 PF07690 Major Facilitator Superfamily JCQ04_RS13085 PF00005 ABC transporter JCQ04_RS13095 PF00881 Nitroreductase family JCQ04_RS13105 PF01476 LysM domain JCQ04_RS13105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS13110 PF00106 short chain dehydrogenase JCQ04_RS13115 PF00132 Bacterial transferase hexapeptide (six repeats) JCQ04_RS13115 PF14602 Hexapeptide repeat of succinyl-transferase JCQ04_RS13115 PF12464 Maltose acetyltransferase JCQ04_RS13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCQ04_RS13120 PF03466 LysR substrate binding domain JCQ04_RS13125 PF03123 CAT RNA binding domain JCQ04_RS13125 PF00874 PRD domain JCQ04_RS13130 PF00367 phosphotransferase system, EIIB JCQ04_RS13130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS13130 PF02378 Phosphotransferase system, EIIC JCQ04_RS13135 PF05368 NmrA-like family JCQ04_RS13150 PF06445 GyrI-like small molecule binding domain JCQ04_RS13150 PF12833 Helix-turn-helix domain JCQ04_RS13155 PF00872 Transposase, Mutator family JCQ04_RS13165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCQ04_RS13165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCQ04_RS13170 PF03591 AzlC protein JCQ04_RS13180 PF00107 Zinc-binding dehydrogenase JCQ04_RS13180 PF08240 Alcohol dehydrogenase GroES-like domain JCQ04_RS13185 PF01207 Dihydrouridine synthase (Dus) JCQ04_RS13190 PF01061 ABC-2 type transporter JCQ04_RS13195 PF00005 ABC transporter JCQ04_RS13200 PF01624 MutS domain I JCQ04_RS13200 PF05192 MutS domain III JCQ04_RS13200 PF05188 MutS domain II JCQ04_RS13200 PF05190 MutS family domain IV JCQ04_RS13200 PF00488 MutS domain V JCQ04_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS13205 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS13210 PF00072 Response regulator receiver domain JCQ04_RS13210 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS13220 PF00005 ABC transporter JCQ04_RS13250 PF07702 UTRA domain JCQ04_RS13250 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS13255 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS13260 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS13265 PF03609 PTS system sorbose-specific iic component JCQ04_RS13270 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS13275 PF03610 PTS system fructose IIA component JCQ04_RS13280 PF01380 SIS domain JCQ04_RS13325 PF03432 Relaxase/Mobilisation nuclease domain JCQ04_RS13410 PF02486 Replication initiation factor JCQ04_RS13410 PF18106 Rolling Circle replication initiation protein N-terminal domain JCQ04_RS13420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCQ04_RS13420 PF01348 Type II intron maturase JCQ04_RS13450 PF00877 NlpC/P60 family JCQ04_RS13475 PF07690 Major Facilitator Superfamily JCQ04_RS13485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JCQ04_RS13485 PF05257 CHAP domain JCQ04_RS13490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS13490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS13495 PF08829 Alpha C protein N terminal JCQ04_RS13495 PF17480 AlphaC C-terminal JCQ04_RS13495 PF00746 LPXTG cell wall anchor motif JCQ04_RS13495 PF04650 YSIRK type signal peptide JCQ04_RS13505 PF12833 Helix-turn-helix domain JCQ04_RS13540 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCQ04_RS13540 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCQ04_RS13560 PF01297 Zinc-uptake complex component A periplasmic JCQ04_RS13560 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JCQ04_RS13570 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCQ04_RS13570 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCQ04_RS13575 PF00471 Ribosomal protein L33 JCQ04_RS13585 PF01783 Ribosomal L32p protein family JCQ04_RS13590 PF00253 Ribosomal protein S14p/S29e JCQ04_RS13595 PF00664 ABC transporter transmembrane region JCQ04_RS13595 PF00005 ABC transporter JCQ04_RS13600 PF00005 ABC transporter JCQ04_RS13600 PF00664 ABC transporter transmembrane region JCQ04_RS13610 PF00005 ABC transporter JCQ04_RS13620 PF00440 Bacterial regulatory proteins, tetR family JCQ04_RS13630 PF01297 Zinc-uptake complex component A periplasmic JCQ04_RS13635 PF00950 ABC 3 transport family JCQ04_RS13645 PF00005 ABC transporter JCQ04_RS13655 PF02899 Phage integrase, N-terminal SAM-like domain JCQ04_RS13655 PF00589 Phage integrase family JCQ04_RS13660 PF00380 Ribosomal protein S9/S16 JCQ04_RS13665 PF00572 Ribosomal protein L13 JCQ04_RS13670 PF00210 Ferritin-like domain JCQ04_RS13675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCQ04_RS13675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCQ04_RS13680 PF06750 Bacterial Peptidase A24 N-terminal domain JCQ04_RS13680 PF01478 Type IV leader peptidase family JCQ04_RS13685 PF01625 Peptide methionine sulfoxide reductase JCQ04_RS13690 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS13695 PF02595 Glycerate kinase family JCQ04_RS13700 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCQ04_RS13700 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCQ04_RS13700 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCQ04_RS13705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JCQ04_RS13705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JCQ04_RS13710 PF01261 Xylose isomerase-like TIM barrel JCQ04_RS13715 PF00107 Zinc-binding dehydrogenase JCQ04_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS13725 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS13730 PF01547 Bacterial extracellular solute-binding protein JCQ04_RS13735 PF00128 Alpha amylase, catalytic domain JCQ04_RS13740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JCQ04_RS13740 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS13745 PF00623 RNA polymerase Rpb1, domain 2 JCQ04_RS13745 PF04983 RNA polymerase Rpb1, domain 3 JCQ04_RS13745 PF05000 RNA polymerase Rpb1, domain 4 JCQ04_RS13745 PF04998 RNA polymerase Rpb1, domain 5 JCQ04_RS13745 PF04997 RNA polymerase Rpb1, domain 1 JCQ04_RS13750 PF04563 RNA polymerase beta subunit JCQ04_RS13750 PF04560 RNA polymerase Rpb2, domain 7 JCQ04_RS13750 PF10385 RNA polymerase beta subunit external 1 domain JCQ04_RS13750 PF04565 RNA polymerase Rpb2, domain 3 JCQ04_RS13750 PF04561 RNA polymerase Rpb2, domain 2 JCQ04_RS13750 PF00562 RNA polymerase Rpb2, domain 6 JCQ04_RS13760 PF02653 Branched-chain amino acid transport system / permease component JCQ04_RS13765 PF00005 ABC transporter JCQ04_RS13770 PF02237 Biotin protein ligase C terminal domain JCQ04_RS13770 PF03099 Biotin/lipoate A/B protein ligase family JCQ04_RS13770 PF08279 HTH domain JCQ04_RS13785 PF00348 Polyprenyl synthetase JCQ04_RS13805 PF04205 FMN-binding domain JCQ04_RS13810 PF02424 ApbE family JCQ04_RS13820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCQ04_RS13820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCQ04_RS13825 PF16325 Peptidase family U32 C-terminal domain JCQ04_RS13825 PF01136 Peptidase family U32 JCQ04_RS13830 PF01136 Peptidase family U32 JCQ04_RS13835 PF10431 C-terminal, D2-small domain, of ClpB protein JCQ04_RS13835 PF02861 Clp amino terminal domain, pathogenicity island component JCQ04_RS13835 PF00004 ATPase family associated with various cellular activities (AAA) JCQ04_RS13835 PF17871 AAA lid domain JCQ04_RS13835 PF07724 AAA domain (Cdc48 subfamily) JCQ04_RS13840 PF17727 CtsR C-terminal dimerization domain JCQ04_RS13840 PF05848 CtsR N-terminal HTH domain JCQ04_RS13905 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS13905 PF00072 Response regulator receiver domain JCQ04_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS13910 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS13910 PF13426 PAS domain JCQ04_RS13910 PF00672 HAMP domain JCQ04_RS13915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCQ04_RS13915 PF02403 Seryl-tRNA synthetase N-terminal domain JCQ04_RS13920 PF00478 IMP dehydrogenase / GMP reductase domain JCQ04_RS13920 PF00571 CBS domain JCQ04_RS13930 PF06071 Protein of unknown function (DUF933) JCQ04_RS13930 PF01926 50S ribosome-binding GTPase JCQ04_RS13935 PF06107 Bacterial protein of unknown function (DUF951) JCQ04_RS13940 PF02195 ParB-like nuclease domain JCQ04_RS13940 PF17762 HTH domain found in ParB protein JCQ04_RS13945 PF13614 AAA domain JCQ04_RS13950 PF02527 rRNA small subunit methyltransferase G JCQ04_RS13955 PF13932 GidA associated domain JCQ04_RS13955 PF01134 Glucose inhibited division protein A JCQ04_RS13960 PF01926 50S ribosome-binding GTPase JCQ04_RS13960 PF12631 MnmE helical domain JCQ04_RS13960 PF10396 GTP-binding protein TrmE N-terminus JCQ04_RS13970 PF01424 R3H domain JCQ04_RS13970 PF14804 Jag N-terminus JCQ04_RS13975 PF02096 60Kd inner membrane protein JCQ04_RS13980 PF00825 Ribonuclease P JCQ04_RS13985 PF00468 Ribosomal protein L34 JCQ04_RS14015 PF17400 Family of unknown function (DUF5406) JCQ04_RS14025 PF13683 Integrase core domain JCQ04_RS14025 PF01610 Transposase JCQ04_RS14040 PF13614 AAA domain JCQ04_RS14060 PF11798 IMS family HHH motif JCQ04_RS14060 PF00817 impB/mucB/samB family JCQ04_RS14060 PF11799 impB/mucB/samB family C-terminal domain JCQ04_RS14070 PF00239 Resolvase, N terminal domain JCQ04_RS14070 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS14075 PF02661 Fic/DOC family JCQ04_RS14115 PF00436 Single-strand binding protein family JCQ04_RS14135 PF01751 Toprim domain JCQ04_RS14135 PF01131 DNA topoisomerase JCQ04_RS14140 PF13154 Protein of unknown function (DUF3991) JCQ04_RS14145 PF18840 Large polyvalent protein associated domain 25 JCQ04_RS14215 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCQ04_RS14240 PF12696 TraM recognition site of TraD and TraG JCQ04_RS14280 PF04203 Sortase domain JCQ04_RS14295 PF04203 Sortase domain JCQ04_RS14335 PF12696 TraM recognition site of TraD and TraG JCQ04_RS14360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JCQ04_RS14375 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JCQ04_RS14430 PF18840 Large polyvalent protein associated domain 25 JCQ04_RS14435 PF13154 Protein of unknown function (DUF3991) JCQ04_RS14440 PF01751 Toprim domain JCQ04_RS14440 PF01131 DNA topoisomerase JCQ04_RS14460 PF00436 Single-strand binding protein family JCQ04_RS14465 PF00436 Single-strand binding protein family JCQ04_RS14520 PF09221 Bacteriocin class IId cyclical uberolysin-like JCQ04_RS14525 PF00872 Transposase, Mutator family JCQ04_RS14540 PF03611 PTS system sugar-specific permease component JCQ04_RS14555 PF00834 Ribulose-phosphate 3 epimerase family JCQ04_RS14565 PF13007 Transposase C of IS166 homeodomain JCQ04_RS14565 PF13817 IS66 C-terminal element JCQ04_RS14565 PF03050 Transposase IS66 family JCQ04_RS14565 PF13005 zinc-finger binding domain of transposase IS66 JCQ04_RS14600 PF00480 ROK family JCQ04_RS14605 PF02378 Phosphotransferase system, EIIC JCQ04_RS14605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS14605 PF00367 phosphotransferase system, EIIB JCQ04_RS14610 PF08244 Glycosyl hydrolases family 32 C terminal JCQ04_RS14610 PF00251 Glycosyl hydrolases family 32 N-terminal domain JCQ04_RS14615 PF00356 Bacterial regulatory proteins, lacI family JCQ04_RS14625 PF01797 Transposase IS200 like JCQ04_RS14635 PF01380 SIS domain JCQ04_RS14635 PF01418 Helix-turn-helix domain, rpiR family JCQ04_RS14640 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JCQ04_RS14645 PF00367 phosphotransferase system, EIIB JCQ04_RS14645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS14645 PF02378 Phosphotransferase system, EIIC JCQ04_RS14650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS14650 PF00367 phosphotransferase system, EIIB JCQ04_RS14650 PF02378 Phosphotransferase system, EIIC JCQ04_RS14655 PF01610 Transposase JCQ04_RS14655 PF13683 Integrase core domain JCQ04_RS14670 PF00589 Phage integrase family JCQ04_RS14670 PF13495 Phage integrase, N-terminal SAM-like domain JCQ04_RS14680 PF02378 Phosphotransferase system, EIIC JCQ04_RS14690 PF01791 DeoC/LacD family aldolase JCQ04_RS14695 PF01380 SIS domain JCQ04_RS14700 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS14700 PF07702 UTRA domain JCQ04_RS14715 PF00872 Transposase, Mutator family JCQ04_RS14720 PF01610 Transposase JCQ04_RS14720 PF13683 Integrase core domain JCQ04_RS14730 PF00872 Transposase, Mutator family JCQ04_RS14745 PF02261 Aspartate decarboxylase JCQ04_RS14750 PF02569 Pantoate-beta-alanine ligase JCQ04_RS14755 PF02548 Ketopantoate hydroxymethyltransferase JCQ04_RS14775 PF03050 Transposase IS66 family JCQ04_RS14775 PF13005 zinc-finger binding domain of transposase IS66 JCQ04_RS14775 PF13817 IS66 C-terminal element JCQ04_RS14775 PF13007 Transposase C of IS166 homeodomain JCQ04_RS14785 PF13683 Integrase core domain JCQ04_RS14785 PF01610 Transposase JCQ04_RS14795 PF13610 DDE domain JCQ04_RS14800 PF00872 Transposase, Mutator family JCQ04_RS14840 PF13610 DDE domain JCQ04_RS14845 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS14845 PF00239 Resolvase, N terminal domain JCQ04_RS14855 PF01653 NAD-dependent DNA ligase adenylation domain JCQ04_RS14855 PF00533 BRCA1 C Terminus (BRCT) domain JCQ04_RS14855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCQ04_RS14855 PF03120 NAD-dependent DNA ligase OB-fold domain JCQ04_RS14855 PF12826 Helix-hairpin-helix motif JCQ04_RS14860 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS14860 PF00239 Resolvase, N terminal domain JCQ04_RS14870 PF08924 Domain of unknown function (DUF1906) JCQ04_RS14870 PF01471 Putative peptidoglycan binding domain JCQ04_RS14885 PF13610 DDE domain JCQ04_RS14890 PF00672 HAMP domain JCQ04_RS14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCQ04_RS14890 PF00512 His Kinase A (phospho-acceptor) domain JCQ04_RS14895 PF00072 Response regulator receiver domain JCQ04_RS14895 PF00486 Transcriptional regulatory protein, C terminal JCQ04_RS14905 PF00266 Aminotransferase class-V JCQ04_RS14920 PF08402 TOBE domain JCQ04_RS14920 PF00005 ABC transporter JCQ04_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component JCQ04_RS14945 PF02811 PHP domain JCQ04_RS14965 PF04055 Radical SAM superfamily JCQ04_RS14980 PF00005 ABC transporter JCQ04_RS15000 PF08534 Redoxin JCQ04_RS15035 PF00589 Phage integrase family JCQ04_RS15045 PF13673 Acetyltransferase (GNAT) domain JCQ04_RS15055 PF13610 DDE domain JCQ04_RS15060 PF00403 Heavy-metal-associated domain JCQ04_RS15070 PF01022 Bacterial regulatory protein, arsR family JCQ04_RS15075 PF00403 Heavy-metal-associated domain JCQ04_RS15080 PF00403 Heavy-metal-associated domain JCQ04_RS15085 PF01790 Prolipoprotein diacylglyceryl transferase JCQ04_RS15095 PF13545 Crp-like helix-turn-helix domain JCQ04_RS15095 PF00027 Cyclic nucleotide-binding domain JCQ04_RS15100 PF01610 Transposase JCQ04_RS15100 PF13683 Integrase core domain JCQ04_RS15105 PF03123 CAT RNA binding domain JCQ04_RS15105 PF00874 PRD domain JCQ04_RS15110 PF00232 Glycosyl hydrolase family 1 JCQ04_RS15115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JCQ04_RS15115 PF00367 phosphotransferase system, EIIB JCQ04_RS15115 PF02378 Phosphotransferase system, EIIC JCQ04_RS15120 PF03610 PTS system fructose IIA component JCQ04_RS15120 PF00874 PRD domain JCQ04_RS15120 PF00158 Sigma-54 interaction domain JCQ04_RS15165 PF03606 C4-dicarboxylate anaerobic carrier JCQ04_RS15175 PF00872 Transposase, Mutator family JCQ04_RS15185 PF07702 UTRA domain JCQ04_RS15185 PF00392 Bacterial regulatory proteins, gntR family JCQ04_RS15190 PF00294 pfkB family carbohydrate kinase JCQ04_RS15195 PF01380 SIS domain JCQ04_RS15200 PF12008 Type I restriction and modification enzyme - subunit R C terminal JCQ04_RS15200 PF18766 SWI2/SNF2 ATPase JCQ04_RS15200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JCQ04_RS15210 PF13683 Integrase core domain JCQ04_RS15210 PF01610 Transposase JCQ04_RS15220 PF08270 M protein trans-acting positive regulator (MGA) PRD domain JCQ04_RS15220 PF05043 Mga helix-turn-helix domain JCQ04_RS15220 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JCQ04_RS15225 PF13419 Haloacid dehalogenase-like hydrolase JCQ04_RS15230 PF00874 PRD domain JCQ04_RS15230 PF00158 Sigma-54 interaction domain JCQ04_RS15230 PF03610 PTS system fructose IIA component JCQ04_RS15235 PF01380 SIS domain JCQ04_RS15240 PF03613 PTS system mannose/fructose/sorbose family IID component JCQ04_RS15245 PF03609 PTS system sorbose-specific iic component JCQ04_RS15250 PF03830 PTS system sorbose subfamily IIB component JCQ04_RS15310 PF17400 Family of unknown function (DUF5406) JCQ04_RS15330 PF06970 Replication initiator protein A (RepA) N-terminus JCQ04_RS15330 PF18008 Replication initiator protein A C-terminal domain JCQ04_RS15335 PF13610 DDE domain JCQ04_RS15355 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JCQ04_RS15365 PF02796 Helix-turn-helix domain of resolvase JCQ04_RS15365 PF00239 Resolvase, N terminal domain JCQ04_RS15370 PF00817 impB/mucB/samB family JCQ04_RS15370 PF11798 IMS family HHH motif JCQ04_RS15370 PF11799 impB/mucB/samB family C-terminal domain JCQ04_RS15390 PF13614 AAA domain JCQ04_RS15435 PF03432 Relaxase/Mobilisation nuclease domain JCQ04_RS15475 PF03432 Relaxase/Mobilisation nuclease domain