locus-tag class description JCP88_RS00005 IPR038454 DnaA, N-terminal domain superfamily JCP88_RS00005 IPR003593 AAA+ ATPase domain JCP88_RS00005 IPR001957 Chromosomal replication control, initiator DnaA JCP88_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like JCP88_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JCP88_RS00005 IPR013317 Chromosomal replication initiator protein DnaA JCP88_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal JCP88_RS00005 IPR010921 Trp repressor/replication initiator JCP88_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00010 IPR001001 DNA polymerase III, beta sliding clamp JCP88_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal JCP88_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central JCP88_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal JCP88_RS00015 IPR036986 RNA-binding S4 domain superfamily JCP88_RS00015 IPR002942 RNA-binding S4 domain JCP88_RS00015 IPR014330 RNA-binding S4-related,YaaA JCP88_RS00020 IPR042174 DNA-binding RecF, domain 2 JCP88_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00020 IPR018078 DNA-binding, RecF, conserved site JCP88_RS00020 IPR003395 RecF/RecN/SMC, N-terminal JCP88_RS00020 IPR001238 DNA-binding, RecF JCP88_RS00025 IPR006171 TOPRIM domain JCP88_RS00025 IPR018522 DNA topoisomerase, type IIA, conserved site JCP88_RS00025 IPR002288 DNA gyrase B subunit, C-terminal JCP88_RS00025 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS00025 IPR034160 DNA gyrase subunit B, TOPRIM domain JCP88_RS00025 IPR011557 DNA gyrase, subunit B JCP88_RS00025 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS00025 IPR001241 DNA topoisomerase, type IIA JCP88_RS00025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JCP88_RS00025 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JCP88_RS00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JCP88_RS00030 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JCP88_RS00030 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JCP88_RS00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JCP88_RS00030 IPR005743 DNA gyrase, subunit A JCP88_RS00030 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JCP88_RS00030 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JCP88_RS00030 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JCP88_RS00035 IPR000529 Ribosomal protein S6 JCP88_RS00035 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JCP88_RS00035 IPR020814 Ribosomal protein S6, plastid/chloroplast JCP88_RS00035 IPR035980 Ribosomal protein S6 superfamily JCP88_RS00040 IPR000424 Primosome PriB/single-strand DNA-binding JCP88_RS00040 IPR011344 Single-stranded DNA-binding protein JCP88_RS00040 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00045 IPR036870 Ribosomal protein S18 superfamily JCP88_RS00045 IPR001648 Ribosomal protein S18 JCP88_RS00045 IPR018275 Ribosomal protein S18, conserved site JCP88_RS00050 IPR001667 DDH domain JCP88_RS00050 IPR038763 DHH phosphoesterase superfamily JCP88_RS00050 IPR003156 DHHA1 domain JCP88_RS00050 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA JCP88_RS00050 IPR000160 GGDEF domain JCP88_RS00055 IPR020069 Ribosomal protein L9, C-terminal JCP88_RS00055 IPR000244 Ribosomal protein L9 JCP88_RS00055 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JCP88_RS00055 IPR020594 Ribosomal protein L9, bacteria/chloroplast JCP88_RS00055 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JCP88_RS00055 IPR020070 Ribosomal protein L9, N-terminal JCP88_RS00055 IPR036935 Ribosomal protein L9, N-terminal domain superfamily JCP88_RS00060 IPR003593 AAA+ ATPase domain JCP88_RS00060 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily JCP88_RS00060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00060 IPR007692 DNA helicase, DnaB type JCP88_RS00060 IPR007694 DNA helicase, DnaB-like, C-terminal JCP88_RS00060 IPR007693 DNA helicase, DnaB-like, N-terminal JCP88_RS00060 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JCP88_RS00065 IPR042111 Adenylosuccinate synthetase, domain 3 JCP88_RS00065 IPR001114 Adenylosuccinate synthetase JCP88_RS00065 IPR042109 Adenylosuccinate synthetase, domain 1 JCP88_RS00065 IPR042110 Adenylosuccinate synthetase, domain 2 JCP88_RS00065 IPR018220 Adenylosuccinate synthase, GTP-binding site JCP88_RS00065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00065 IPR033128 Adenylosuccinate synthase, active site JCP88_RS00070 IPR003797 DegV JCP88_RS00075 IPR003439 ABC transporter-like JCP88_RS00075 IPR032781 ABC-transporter extension domain JCP88_RS00075 IPR003593 AAA+ ATPase domain JCP88_RS00075 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00085 IPR029035 DHS-like NAD/FAD-binding domain superfamily JCP88_RS00085 IPR014092 Pyruvate oxidase JCP88_RS00085 IPR029061 Thiamin diphosphate-binding fold JCP88_RS00085 IPR012000 Thiamine pyrophosphate enzyme, central domain JCP88_RS00085 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JCP88_RS00085 IPR000399 TPP-binding enzyme, conserved site JCP88_RS00085 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JCP88_RS00090 IPR003689 Zinc/iron permease JCP88_RS00100 IPR010617 Endosomal/lysomomal potassium channel TMEM175 JCP88_RS00110 IPR006976 VanZ-like JCP88_RS00150 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JCP88_RS00150 IPR037171 NagB/RpiA transferase-like JCP88_RS00150 IPR001034 DeoR-type HTH domain JCP88_RS00150 IPR014036 DeoR C-terminal sensor domain JCP88_RS00150 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS00150 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS00155 IPR017853 Glycoside hydrolase superfamily JCP88_RS00155 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS00155 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS00155 IPR001360 Glycoside hydrolase family 1 JCP88_RS00155 IPR005928 6-phospho-beta-galactosidase JCP88_RS00160 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JCP88_RS00160 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JCP88_RS00165 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS00165 IPR036095 PTS system IIB component-like superfamily JCP88_RS00165 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS00165 IPR003352 Phosphotransferase system, EIIC JCP88_RS00165 IPR041713 PTS system lactose-specific EIICB component, IIB domain JCP88_RS00165 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS00165 IPR004801 Phosphotransferase system, lactose-specific IIC component JCP88_RS00170 IPR017853 Glycoside hydrolase superfamily JCP88_RS00170 IPR011683 Glycosyl hydrolase family 53 JCP88_RS00175 IPR001207 Transposase, mutator type JCP88_RS00180 IPR042174 DNA-binding RecF, domain 2 JCP88_RS00180 IPR003395 RecF/RecN/SMC, N-terminal JCP88_RS00180 IPR001238 DNA-binding, RecF JCP88_RS00180 IPR018078 DNA-binding, RecF, conserved site JCP88_RS00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00185 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS00185 IPR034739 UvrD/AddA helicase, N-terminal JCP88_RS00185 IPR014017 UvrD-like DNA helicase, C-terminal JCP88_RS00185 IPR013986 DExx box DNA helicase domain superfamily JCP88_RS00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00185 IPR000212 DNA helicase, UvrD/REP type JCP88_RS00205 IPR002543 FtsK domain JCP88_RS00205 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00210 IPR040819 Rolling Circle replication initiation protein, N-terminal JCP88_RS00210 IPR003491 Replication initiation factor JCP88_RS00255 IPR023346 Lysozyme-like domain superfamily JCP88_RS00255 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS00255 IPR000064 Endopeptidase, NLPC/P60 domain JCP88_RS00270 IPR005517 Translation elongation factor EFG/EF2, domain IV JCP88_RS00270 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS00270 IPR035650 Tetracycline resistance protein, C-terminal JCP88_RS00270 IPR041095 Elongation Factor G, domain II JCP88_RS00270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS00270 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00270 IPR031157 Tr-type G domain, conserved site JCP88_RS00270 IPR000640 Elongation factor EFG, domain V-like JCP88_RS00270 IPR035647 EF-G domain III/V-like JCP88_RS00270 IPR005225 Small GTP-binding protein domain JCP88_RS00270 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00270 IPR000795 Transcription factor, GTP-binding domain JCP88_RS00300 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS00300 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS00300 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS00300 IPR002104 Integrase, catalytic domain JCP88_RS00300 IPR010998 Integrase/recombinase, N-terminal JCP88_RS00305 IPR025777 GMP synthetase ATP pyrophosphatase domain JCP88_RS00305 IPR022955 GMP synthase JCP88_RS00305 IPR004739 GMP synthase, glutamine amidotransferase JCP88_RS00305 IPR017926 Glutamine amidotransferase JCP88_RS00305 IPR029062 Class I glutamine amidotransferase-like JCP88_RS00305 IPR001674 GMP synthase, C-terminal JCP88_RS00305 IPR022310 NAD/GMP synthase JCP88_RS00305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS00310 IPR006083 Phosphoribulokinase/uridine kinase JCP88_RS00310 IPR004566 Pantothenate kinase JCP88_RS00310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS00315 IPR007848 Methyltransferase small domain JCP88_RS00320 IPR028082 Periplasmic binding protein-like I JCP88_RS00320 IPR023588 Transcription regulator HTH, PurR JCP88_RS00320 IPR000843 LacI-type HTH domain JCP88_RS00320 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS00325 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily JCP88_RS00325 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily JCP88_RS00325 IPR000312 Glycosyl transferase, family 3 JCP88_RS00325 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase JCP88_RS00325 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal JCP88_RS00325 IPR017459 Glycosyl transferase family 3, N-terminal domain JCP88_RS00325 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site JCP88_RS00325 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic JCP88_RS00325 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily JCP88_RS00330 IPR013785 Aldolase-type TIM barrel JCP88_RS00330 IPR028581 Deoxyribose-phosphate aldolase type I JCP88_RS00330 IPR002915 DeoC/FbaB/ lacD aldolase JCP88_RS00330 IPR011343 Deoxyribose-phosphate aldolase JCP88_RS00335 IPR016193 Cytidine deaminase-like JCP88_RS00335 IPR006262 Cytidine deaminase, homotetrameric JCP88_RS00335 IPR002125 Cytidine and deoxycytidylate deaminase domain JCP88_RS00335 IPR016192 APOBEC/CMP deaminase, zinc-binding JCP88_RS00340 IPR003760 ABC transporter substrate-binding protein PnrA-like JCP88_RS00340 IPR028082 Periplasmic binding protein-like I JCP88_RS00345 IPR003593 AAA+ ATPase domain JCP88_RS00345 IPR003439 ABC transporter-like JCP88_RS00345 IPR017871 ABC transporter, conserved site JCP88_RS00345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00350 IPR001851 ABC transporter, permease JCP88_RS00355 IPR001851 ABC transporter, permease JCP88_RS00360 IPR010045 Phosphopentomutase JCP88_RS00360 IPR017850 Alkaline-phosphatase-like, core domain superfamily JCP88_RS00360 IPR006124 Metalloenzyme JCP88_RS00360 IPR024052 Phosphopentomutase DeoB cap domain superfamily JCP88_RS00365 IPR000845 Nucleoside phosphorylase domain JCP88_RS00365 IPR035994 Nucleoside phosphorylase superfamily JCP88_RS00365 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific JCP88_RS00365 IPR018099 Purine phosphorylase, family 2, conserved site JCP88_RS00365 IPR011268 Purine nucleoside phosphorylase JCP88_RS00370 IPR018016 Nucleoside phosphorylase, conserved site JCP88_RS00370 IPR000845 Nucleoside phosphorylase domain JCP88_RS00370 IPR004402 Purine nucleoside phosphorylase DeoD-type JCP88_RS00370 IPR035994 Nucleoside phosphorylase superfamily JCP88_RS00375 IPR013078 Histidine phosphatase superfamily, clade-1 JCP88_RS00375 IPR029033 Histidine phosphatase superfamily JCP88_RS00375 IPR005952 Phosphoglycerate mutase 1 JCP88_RS00380 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS00380 IPR006120 Resolvase, HTH domain JCP88_RS00380 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS00380 IPR006118 Recombinase, conserved site JCP88_RS00380 IPR009057 Homeobox-like domain superfamily JCP88_RS00385 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup JCP88_RS00385 IPR004788 Ribose 5-phosphate isomerase, type A JCP88_RS00385 IPR037171 NagB/RpiA transferase-like JCP88_RS00390 IPR006032 Ribosomal protein S12/S23 JCP88_RS00390 IPR005679 Ribosomal protein S12, bacterial-type JCP88_RS00390 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00395 IPR036823 Ribosomal protein S7 domain superfamily JCP88_RS00395 IPR020606 Ribosomal protein S7, conserved site JCP88_RS00395 IPR005717 Ribosomal protein S7, bacterial/organellar-type JCP88_RS00395 IPR000235 Ribosomal protein S5/S7 JCP88_RS00395 IPR023798 Ribosomal protein S7 domain JCP88_RS00400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS00400 IPR000795 Transcription factor, GTP-binding domain JCP88_RS00400 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS00400 IPR004540 Translation elongation factor EFG/EF2 JCP88_RS00400 IPR005517 Translation elongation factor EFG/EF2, domain IV JCP88_RS00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00400 IPR031157 Tr-type G domain, conserved site JCP88_RS00400 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00400 IPR041095 Elongation Factor G, domain II JCP88_RS00400 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS00400 IPR000640 Elongation factor EFG, domain V-like JCP88_RS00400 IPR035649 EFG, domain V JCP88_RS00400 IPR009022 Elongation factor G, domain III JCP88_RS00400 IPR005225 Small GTP-binding protein domain JCP88_RS00400 IPR035647 EF-G domain III/V-like JCP88_RS00405 IPR033720 Elongation factor Tu, domain 2 JCP88_RS00405 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS00405 IPR000795 Transcription factor, GTP-binding domain JCP88_RS00405 IPR005225 Small GTP-binding protein domain JCP88_RS00405 IPR031157 Tr-type G domain, conserved site JCP88_RS00405 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain JCP88_RS00405 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS00405 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JCP88_RS00405 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JCP88_RS00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00405 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JCP88_RS00410 IPR027486 Ribosomal protein S10 domain JCP88_RS00410 IPR001848 Ribosomal protein S10 JCP88_RS00410 IPR018268 Ribosomal protein S10, conserved site JCP88_RS00410 IPR036838 Ribosomal protein S10 domain superfamily JCP88_RS00415 IPR019927 Ribosomal protein L3, bacterial/organelle-type JCP88_RS00415 IPR019926 Ribosomal protein L3, conserved site JCP88_RS00415 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS00415 IPR000597 Ribosomal protein L3 JCP88_RS00420 IPR002136 Ribosomal protein L4/L1e JCP88_RS00420 IPR023574 Ribosomal protein L4 domain superfamily JCP88_RS00420 IPR013005 50S ribosomal protein uL4 JCP88_RS00425 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JCP88_RS00425 IPR012678 Ribosomal protein L23/L15e core domain superfamily JCP88_RS00425 IPR001014 Ribosomal protein L23/L25, conserved site JCP88_RS00425 IPR013025 Ribosomal protein L25/L23 JCP88_RS00430 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00430 IPR005880 Ribosomal protein L2, bacterial/organellar-type JCP88_RS00430 IPR002171 Ribosomal protein L2 JCP88_RS00430 IPR014722 Ribosomal protein L2, domain 2 JCP88_RS00430 IPR022666 Ribosomal Proteins L2, RNA binding domain JCP88_RS00430 IPR022669 Ribosomal protein L2, C-terminal JCP88_RS00430 IPR022671 Ribosomal protein L2, conserved site JCP88_RS00430 IPR014726 Ribosomal protein L2, domain 3 JCP88_RS00430 IPR008991 Translation protein SH3-like domain superfamily JCP88_RS00435 IPR023575 Ribosomal protein S19, superfamily JCP88_RS00435 IPR020934 Ribosomal protein S19 conserved site JCP88_RS00435 IPR002222 Ribosomal protein S19/S15 JCP88_RS00435 IPR005732 Ribosomal protein S19, bacterial-type JCP88_RS00440 IPR018260 Ribosomal protein L22/L17, conserved site JCP88_RS00440 IPR036394 Ribosomal protein L22/L17 superfamily JCP88_RS00440 IPR001063 Ribosomal protein L22/L17 JCP88_RS00440 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type JCP88_RS00445 IPR004087 K Homology domain JCP88_RS00445 IPR015946 K homology domain-like, alpha/beta JCP88_RS00445 IPR005704 Ribosomal protein S3, bacterial-type JCP88_RS00445 IPR018280 Ribosomal protein S3, conserved site JCP88_RS00445 IPR036419 Ribosomal protein S3, C-terminal domain superfamily JCP88_RS00445 IPR001351 Ribosomal protein S3, C-terminal JCP88_RS00445 IPR004044 K Homology domain, type 2 JCP88_RS00445 IPR009019 K homology domain superfamily, prokaryotic type JCP88_RS00450 IPR016180 Ribosomal protein L10e/L16 JCP88_RS00450 IPR036920 Ribosomal protein L10e/L16 superfamily JCP88_RS00450 IPR020798 Ribosomal protein L16, conserved site JCP88_RS00450 IPR000114 Ribosomal protein L16 JCP88_RS00455 IPR001854 Ribosomal protein L29/L35 JCP88_RS00455 IPR036049 Ribosomal protein L29/L35 superfamily JCP88_RS00455 IPR018254 Ribosomal protein L29, conserved site JCP88_RS00460 IPR019979 Ribosomal protein S17, conserved site JCP88_RS00460 IPR000266 Ribosomal protein S17/S11 JCP88_RS00460 IPR019984 30S ribosomal protein S17 JCP88_RS00460 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00465 IPR019972 Ribosomal protein L14P, conserved site JCP88_RS00465 IPR000218 Ribosomal protein L14P JCP88_RS00465 IPR036853 Ribosomal protein L14 superfamily JCP88_RS00465 IPR005745 Ribosomal protein L14P, bacterial-type JCP88_RS00470 IPR005825 Ribosomal protein L24/L26, conserved site JCP88_RS00470 IPR005824 KOW JCP88_RS00470 IPR041988 Ribosomal Protein L26/L24, KOW domain JCP88_RS00470 IPR008991 Translation protein SH3-like domain superfamily JCP88_RS00470 IPR014722 Ribosomal protein L2, domain 2 JCP88_RS00470 IPR003256 Ribosomal protein L24 JCP88_RS00475 IPR031309 Ribosomal protein L5, C-terminal JCP88_RS00475 IPR002132 Ribosomal protein L5 JCP88_RS00475 IPR022803 Ribosomal protein L5 domain superfamily JCP88_RS00475 IPR031310 Ribosomal protein L5, N-terminal JCP88_RS00475 IPR020929 Ribosomal protein L5, conserved site JCP88_RS00475 IPR020930 Ribosomal protein L5, bacterial-type JCP88_RS00480 IPR001209 Ribosomal protein S14 JCP88_RS00480 IPR018271 Ribosomal protein S14, conserved site JCP88_RS00480 IPR023053 Ribosomal protein S14, type Z JCP88_RS00485 IPR000630 Ribosomal protein S8 JCP88_RS00485 IPR035987 Ribosomal protein S8 superfamily JCP88_RS00490 IPR000702 Ribosomal protein L6 JCP88_RS00490 IPR020040 Ribosomal protein L6, alpha-beta domain JCP88_RS00490 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily JCP88_RS00490 IPR002358 Ribosomal protein L6, conserved site JCP88_RS00490 IPR019906 Ribosomal protein L6, bacterial-type JCP88_RS00495 IPR005484 Ribosomal protein L18 JCP88_RS00495 IPR004389 Ribosomal protein L18, bacterial-type JCP88_RS00500 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00500 IPR013810 Ribosomal protein S5, N-terminal JCP88_RS00500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS00500 IPR005324 Ribosomal protein S5, C-terminal JCP88_RS00500 IPR005712 Ribosomal protein S5, bacterial-type JCP88_RS00500 IPR000851 Ribosomal protein S5 JCP88_RS00500 IPR018192 Ribosomal protein S5, N-terminal, conserved site JCP88_RS00505 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JCP88_RS00505 IPR005996 Ribosomal protein L30, bacterial-type JCP88_RS00505 IPR018038 Ribosomal protein L30, conserved site JCP88_RS00505 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JCP88_RS00510 IPR021131 Ribosomal protein L18e/L15P JCP88_RS00510 IPR001196 Ribosomal protein L15, conserved site JCP88_RS00510 IPR005749 Ribosomal protein L15, bacterial-type JCP88_RS00510 IPR030878 Ribosomal protein L15 JCP88_RS00510 IPR036227 Ribosomal L18e/L15P superfamily JCP88_RS00515 IPR026593 Protein translocase subunit SecY JCP88_RS00515 IPR002208 SecY/SEC61-alpha family JCP88_RS00515 IPR030659 SecY conserved site JCP88_RS00515 IPR023201 SecY domain superfamily JCP88_RS00520 IPR006259 Adenylate kinase subfamily JCP88_RS00520 IPR033690 Adenylate kinase, conserved site JCP88_RS00520 IPR007862 Adenylate kinase, active site lid domain JCP88_RS00520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00520 IPR000850 Adenylate kinase/UMP-CMP kinase JCP88_RS00525 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00525 IPR006196 RNA-binding domain, S1, IF1 type JCP88_RS00525 IPR022967 RNA-binding domain, S1 JCP88_RS00525 IPR004368 Translation initiation factor IF-1 JCP88_RS00530 IPR035977 Ribosomal protein L36 superfamily JCP88_RS00530 IPR000473 Ribosomal protein L36 JCP88_RS00535 IPR010979 Ribosomal protein S13-like, H2TH JCP88_RS00535 IPR001892 Ribosomal protein S13 JCP88_RS00535 IPR027437 30s ribosomal protein S13, C-terminal JCP88_RS00535 IPR019980 Ribosomal protein S13, bacterial-type JCP88_RS00535 IPR018269 Ribosomal protein S13, conserved site JCP88_RS00540 IPR019981 Ribosomal protein S11, bacterial-type JCP88_RS00540 IPR001971 Ribosomal protein S11 JCP88_RS00540 IPR018102 Ribosomal S11, conserved site JCP88_RS00540 IPR036967 Ribosomal protein S11 superfamily JCP88_RS00545 IPR011260 RNA polymerase, alpha subunit, C-terminal JCP88_RS00545 IPR011262 DNA-directed RNA polymerase, insert domain JCP88_RS00545 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type JCP88_RS00545 IPR011773 DNA-directed RNA polymerase, alpha subunit JCP88_RS00545 IPR036603 RNA polymerase, RBP11-like subunit JCP88_RS00545 IPR036643 DNA-directed RNA polymerase, insert domain superfamily JCP88_RS00550 IPR036373 Ribosomal protein L17 superfamily JCP88_RS00550 IPR000456 Ribosomal protein L17 JCP88_RS00555 IPR003593 AAA+ ATPase domain JCP88_RS00555 IPR017871 ABC transporter, conserved site JCP88_RS00555 IPR015856 ABC transporter, CbiO/EcfA subunit JCP88_RS00555 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 JCP88_RS00555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00555 IPR003439 ABC transporter-like JCP88_RS00560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00560 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 JCP88_RS00560 IPR003593 AAA+ ATPase domain JCP88_RS00560 IPR015856 ABC transporter, CbiO/EcfA subunit JCP88_RS00560 IPR003439 ABC transporter-like JCP88_RS00560 IPR017871 ABC transporter, conserved site JCP88_RS00565 IPR003339 ABC/ECF transporter, transmembrane component JCP88_RS00565 IPR024919 ECF transporter transmembrane protein EcfT JCP88_RS00570 IPR020095 Pseudouridine synthase I, TruA, C-terminal JCP88_RS00570 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain JCP88_RS00570 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS00570 IPR001406 Pseudouridine synthase I, TruA JCP88_RS00580 IPR037147 Ribosomal protein L28/L24 superfamily JCP88_RS00580 IPR001383 Ribosomal protein L28 JCP88_RS00580 IPR026569 Ribosomal protein L28/L24 JCP88_RS00580 IPR034704 L28p-like JCP88_RS00585 IPR005531 Alkaline shock protein Asp23 JCP88_RS00590 IPR033470 Uncharacterised protein, DhaK domain JCP88_RS00590 IPR036117 DhaL domain superfamily JCP88_RS00590 IPR004007 DhaL domain JCP88_RS00590 IPR019986 DAK2 domain-containing protein YloV JCP88_RS00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00595 IPR033454 RecG, wedge domain JCP88_RS00595 IPR001650 Helicase, C-terminal JCP88_RS00595 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS00595 IPR004609 ATP-dependent DNA helicase RecG JCP88_RS00595 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00595 IPR011545 DEAD/DEAH box helicase domain JCP88_RS00600 IPR012281 Phospholipid biosynthesis protein, PlsX-like JCP88_RS00600 IPR003664 Fatty acid synthesis PlsX protein JCP88_RS00605 IPR003231 Acyl carrier protein (ACP) JCP88_RS00605 IPR036736 ACP-like superfamily JCP88_RS00605 IPR009081 Phosphopantetheine binding ACP domain JCP88_RS00610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JCP88_RS00610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00610 IPR003439 ABC transporter-like JCP88_RS00610 IPR017871 ABC transporter, conserved site JCP88_RS00610 IPR003593 AAA+ ATPase domain JCP88_RS00615 IPR003439 ABC transporter-like JCP88_RS00615 IPR003593 AAA+ ATPase domain JCP88_RS00615 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00615 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JCP88_RS00615 IPR017871 ABC transporter, conserved site JCP88_RS00620 IPR035906 MetI-like superfamily JCP88_RS00620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS00625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS00625 IPR035906 MetI-like superfamily JCP88_RS00630 IPR000914 Solute-binding protein family 5 domain JCP88_RS00630 IPR023765 Solute-binding protein family 5, conserved site JCP88_RS00630 IPR030678 Peptide/nickel binding protein, MppA-type JCP88_RS00630 IPR039424 Solute-binding protein family 5 JCP88_RS00635 IPR000999 Ribonuclease III domain JCP88_RS00635 IPR036389 Ribonuclease III, endonuclease domain superfamily JCP88_RS00635 IPR011907 Ribonuclease III JCP88_RS00635 IPR014720 Double-stranded RNA-binding domain JCP88_RS00640 IPR011890 Structural maintenance of chromosomes protein, prokaryotic JCP88_RS00640 IPR036277 SMCs flexible hinge superfamily JCP88_RS00640 IPR010935 SMCs flexible hinge JCP88_RS00640 IPR024704 Structural maintenance of chromosomes protein JCP88_RS00640 IPR003395 RecF/RecN/SMC, N-terminal JCP88_RS00640 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00645 IPR000150 Cof family JCP88_RS00645 IPR036412 HAD-like superfamily JCP88_RS00645 IPR023214 HAD superfamily JCP88_RS00645 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS00650 IPR003593 AAA+ ATPase domain JCP88_RS00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00650 IPR013822 Signal recognition particle SRP54, helical bundle JCP88_RS00650 IPR036225 SRP/SRP receptor, N-terminal JCP88_RS00650 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JCP88_RS00650 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JCP88_RS00650 IPR004390 Signal-recognition particle receptor FtsY JCP88_RS00655 IPR011761 ATP-grasp fold JCP88_RS00655 IPR003806 ATP-grasp fold, PylC-type JCP88_RS00655 IPR013815 ATP-grasp fold, subdomain 1 JCP88_RS00655 IPR040657 GshAB, ATP-grasp-like domain JCP88_RS00655 IPR006334 Glutamate--cysteine ligase, monofunctional JCP88_RS00655 IPR006335 Glutathione biosynthesis bifunctional protein GshAB JCP88_RS00655 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JCP88_RS00655 IPR007370 Glutamate--cysteine ligase JCP88_RS00665 IPR037294 ABC transporter, BtuC-like JCP88_RS00665 IPR000522 ABC transporter, permease protein, BtuC-like JCP88_RS00670 IPR037294 ABC transporter, BtuC-like JCP88_RS00670 IPR000522 ABC transporter, permease protein, BtuC-like JCP88_RS00675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00675 IPR017871 ABC transporter, conserved site JCP88_RS00675 IPR003439 ABC transporter-like JCP88_RS00675 IPR003593 AAA+ ATPase domain JCP88_RS00680 IPR033870 FatB domain JCP88_RS00680 IPR002491 ABC transporter periplasmic binding domain JCP88_RS00705 IPR019931 LPXTG cell wall anchor domain JCP88_RS00705 IPR032675 Leucine-rich repeat domain superfamily JCP88_RS00705 IPR009459 MucBP domain JCP88_RS00720 IPR001207 Transposase, mutator type JCP88_RS00735 IPR022357 Major intrinsic protein, conserved site JCP88_RS00735 IPR023271 Aquaporin-like JCP88_RS00735 IPR000425 Major intrinsic protein JCP88_RS00740 IPR023760 Holin-like protein CidA JCP88_RS00740 IPR005538 LrgA/CidA family JCP88_RS00745 IPR005261 Conserved hypothetical protein CHP00659 JCP88_RS00745 IPR007300 CidB/LrgB family JCP88_RS00755 IPR007300 CidB/LrgB family JCP88_RS00770 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS00770 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS00770 IPR036291 NAD(P)-binding domain superfamily JCP88_RS00770 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JCP88_RS00780 IPR003784 BioY protein JCP88_RS00785 IPR022801 Ribosomal protein S4/S9 JCP88_RS00785 IPR001912 Ribosomal protein S4/S9, N-terminal JCP88_RS00785 IPR005709 Ribosomal protein S4, bacterial-type JCP88_RS00785 IPR018079 Ribosomal protein S4, conserved site JCP88_RS00785 IPR002942 RNA-binding S4 domain JCP88_RS00785 IPR036986 RNA-binding S4 domain superfamily JCP88_RS00800 IPR023214 HAD superfamily JCP88_RS00800 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS00800 IPR036412 HAD-like superfamily JCP88_RS00800 IPR000150 Cof family JCP88_RS00805 IPR029052 Metallo-dependent phosphatase-like JCP88_RS00805 IPR005235 Metallophosphoesterase, YmdB-like JCP88_RS00815 IPR016151 DNA mismatch repair protein MutS, N-terminal JCP88_RS00815 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JCP88_RS00815 IPR005748 DNA mismatch repair protein MutS JCP88_RS00815 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JCP88_RS00815 IPR000432 DNA mismatch repair protein MutS, C-terminal JCP88_RS00815 IPR007861 DNA mismatch repair protein MutS, clamp JCP88_RS00815 IPR007696 DNA mismatch repair protein MutS, core JCP88_RS00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00815 IPR036678 MutS, connector domain superfamily JCP88_RS00815 IPR007860 DNA mismatch repair protein MutS, connector domain JCP88_RS00815 IPR017261 DNA mismatch repair protein MutS/MSH JCP88_RS00820 IPR014762 DNA mismatch repair, conserved site JCP88_RS00820 IPR020667 DNA mismatch repair protein, MutL JCP88_RS00820 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00820 IPR002099 DNA mismatch repair protein family, N-terminal JCP88_RS00820 IPR013507 DNA mismatch repair protein, S5 domain 2-like JCP88_RS00820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS00820 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms JCP88_RS00820 IPR014790 MutL, C-terminal, dimerisation JCP88_RS00820 IPR042120 MutL, C-terminal domain, dimerisation subdomain JCP88_RS00820 IPR042121 MutL, C-terminal domain, regulatory subdomain JCP88_RS00820 IPR037198 MutL, C-terminal domain superfamily JCP88_RS00820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS00825 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein JCP88_RS00825 IPR029001 Inosine triphosphate pyrophosphatase-like JCP88_RS00830 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JCP88_RS00830 IPR011296 Phosphotransferase system, trehalose-specific IIBC component JCP88_RS00830 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS00830 IPR036878 Glucose permease domain IIB JCP88_RS00830 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS00830 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS00830 IPR003352 Phosphotransferase system, EIIC JCP88_RS00835 IPR011663 UbiC transcription regulator-associated JCP88_RS00835 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS00835 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS00835 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS00835 IPR000524 Transcription regulator HTH, GntR JCP88_RS00835 IPR012770 Trehalose operon transcriptional repressor JCP88_RS00840 IPR002579 Peptide methionine sulphoxide reductase MrsB JCP88_RS00840 IPR028427 Peptide methionine sulfoxide reductase JCP88_RS00840 IPR011057 Mss4-like superfamily JCP88_RS00845 IPR036267 RuvA, C-terminal domain superfamily JCP88_RS00845 IPR011114 Holliday junction DNA helicase RuvA, C-terminal JCP88_RS00845 IPR010994 RuvA domain 2-like JCP88_RS00845 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial JCP88_RS00845 IPR000085 Bacterial DNA recombination protein RuvA JCP88_RS00845 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00845 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JCP88_RS00850 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS00850 IPR003593 AAA+ ATPase domain JCP88_RS00850 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS00850 IPR041445 RuvB, AAA lid domain JCP88_RS00850 IPR004605 DNA helicase, Holliday junction RuvB-type JCP88_RS00850 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00850 IPR008824 RuvB-like P-loop domain JCP88_RS00850 IPR008823 RuvB C-terminal winged helix domain JCP88_RS00860 IPR023485 Phosphotyrosine protein phosphatase I JCP88_RS00860 IPR036196 Phosphotyrosine protein phosphatase I superfamily JCP88_RS00860 IPR017867 Protein-tyrosine phosphatase, low molecular weight JCP88_RS00870 IPR001207 Transposase, mutator type JCP88_RS00875 IPR004685 Branched-chain amino acid transport system II carrier protein JCP88_RS00880 IPR010617 Endosomal/lysomomal potassium channel TMEM175 JCP88_RS00885 IPR004840 Amino acid permease, conserved site JCP88_RS00885 IPR004841 Amino acid permease/ SLC12A domain JCP88_RS00890 IPR017871 ABC transporter, conserved site JCP88_RS00890 IPR003439 ABC transporter-like JCP88_RS00890 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JCP88_RS00890 IPR003593 AAA+ ATPase domain JCP88_RS00890 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00895 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS00895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS00895 IPR035906 MetI-like superfamily JCP88_RS00905 IPR029035 DHS-like NAD/FAD-binding domain superfamily JCP88_RS00905 IPR003000 Sirtuin family JCP88_RS00905 IPR026591 Sirtuin, catalytic core small domain superfamily JCP88_RS00905 IPR028628 Sirtuin, class U JCP88_RS00905 IPR026590 Sirtuin family, catalytic core domain JCP88_RS00910 IPR001451 Hexapeptide repeat JCP88_RS00910 IPR018357 Hexapeptide transferase, conserved site JCP88_RS00910 IPR024688 Maltose/galactoside acetyltransferase JCP88_RS00910 IPR011004 Trimeric LpxA-like superfamily JCP88_RS00915 IPR035922 3H domain superfamily JCP88_RS00915 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS00915 IPR026043 Transcription repressor NadR JCP88_RS00915 IPR013196 Helix-turn-helix, type 11 JCP88_RS00915 IPR004173 3H domain JCP88_RS00915 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS00920 IPR036821 Peptide deformylase superfamily JCP88_RS00920 IPR023635 Peptide deformylase JCP88_RS00925 IPR009068 S15/NS1, RNA-binding JCP88_RS00925 IPR005290 Ribosomal protein S15, bacterial-type JCP88_RS00925 IPR000589 Ribosomal protein S15 JCP88_RS00930 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS00930 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily JCP88_RS00930 IPR004087 K Homology domain JCP88_RS00930 IPR003029 S1 domain JCP88_RS00930 IPR036345 Exoribonuclease, PH domain 2 superfamily JCP88_RS00930 IPR015847 Exoribonuclease, phosphorolytic domain 2 JCP88_RS00930 IPR001247 Exoribonuclease, phosphorolytic domain 1 JCP88_RS00930 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain JCP88_RS00930 IPR022967 RNA-binding domain, S1 JCP88_RS00930 IPR004088 K Homology domain, type 1 JCP88_RS00930 IPR036612 K Homology domain, type 1 superfamily JCP88_RS00930 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS00930 IPR027408 PNPase/RNase PH domain superfamily JCP88_RS00930 IPR012162 Polyribonucleotide nucleotidyltransferase JCP88_RS00940 IPR023051 Potassium uptake protein, low affinity, Kup JCP88_RS00940 IPR003855 Potassium transporter JCP88_RS00945 IPR005170 Transporter-associated domain JCP88_RS00945 IPR036318 FAD-binding, type PCMH-like superfamily JCP88_RS00945 IPR016169 FAD-binding, type PCMH, subdomain 2 JCP88_RS00945 IPR002550 CNNM, transmembrane domain JCP88_RS00945 IPR000644 CBS domain JCP88_RS00950 IPR002528 Multi antimicrobial extrusion protein JCP88_RS00960 IPR020057 Ribosomal protein L25, beta domain JCP88_RS00960 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal JCP88_RS00960 IPR029751 Ribosomal protein L25 JCP88_RS00960 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily JCP88_RS00960 IPR001021 Ribosomal protein L25, long-form JCP88_RS00960 IPR037121 Ribosomal protein L25, C-terminal JCP88_RS00965 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS00965 IPR002942 RNA-binding S4 domain JCP88_RS00965 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JCP88_RS00965 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JCP88_RS00965 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JCP88_RS00965 IPR036986 RNA-binding S4 domain superfamily JCP88_RS00965 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS00970 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB JCP88_RS00970 IPR036412 HAD-like superfamily JCP88_RS00970 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS00970 IPR006439 HAD hydrolase, subfamily IA JCP88_RS00970 IPR023214 HAD superfamily JCP88_RS00970 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS00975 IPR000764 Uridine kinase-like JCP88_RS00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS00975 IPR026008 Uridine kinase JCP88_RS00975 IPR006083 Phosphoribulokinase/uridine kinase JCP88_RS01000 IPR003791 Protein of unknown function UPF0178 JCP88_RS01005 IPR004147 UbiB domain JCP88_RS01005 IPR011009 Protein kinase-like domain superfamily JCP88_RS01010 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JCP88_RS01010 IPR011095 D-alanine--D-alanine ligase, C-terminal JCP88_RS01010 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS01010 IPR013815 ATP-grasp fold, subdomain 1 JCP88_RS01010 IPR005905 D-alanine--D-alanine ligase JCP88_RS01010 IPR011761 ATP-grasp fold JCP88_RS01010 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JCP88_RS01015 IPR036615 Mur ligase, C-terminal domain superfamily JCP88_RS01015 IPR004101 Mur ligase, C-terminal JCP88_RS01015 IPR013221 Mur ligase, central JCP88_RS01015 IPR000713 Mur ligase, N-terminal catalytic domain JCP88_RS01015 IPR035911 MurE/MurF, N-terminal JCP88_RS01015 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase JCP88_RS01015 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS01020 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JCP88_RS01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS01020 IPR001650 Helicase, C-terminal JCP88_RS01020 IPR030880 DEAD-box ATP-dependent RNA helicase CshA JCP88_RS01020 IPR011545 DEAD/DEAH box helicase domain JCP88_RS01020 IPR014014 RNA helicase, DEAD-box type, Q motif JCP88_RS01020 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS01025 IPR008278 4'-phosphopantetheinyl transferase domain JCP88_RS01025 IPR037143 4'-phosphopantetheinyl transferase domain superfamily JCP88_RS01025 IPR002582 Holo-[acyl carrier protein] synthase JCP88_RS01025 IPR004568 Phosphopantetheine-protein transferase domain JCP88_RS01030 IPR029066 PLP-binding barrel JCP88_RS01030 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JCP88_RS01030 IPR001608 Alanine racemase, N-terminal JCP88_RS01030 IPR011079 Alanine racemase, C-terminal JCP88_RS01030 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JCP88_RS01030 IPR000821 Alanine racemase JCP88_RS01035 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JCP88_RS01035 IPR003477 mRNA interferase PemK-like JCP88_RS01040 IPR023036 Ribosomal protein S14, bacterial/plastid JCP88_RS01040 IPR001209 Ribosomal protein S14 JCP88_RS01045 IPR036299 Polyketide synthase, docking domain superfmaily JCP88_RS01045 IPR020807 Polyketide synthase, dehydratase domain JCP88_RS01045 IPR020843 Polyketide synthase, enoylreductase domain JCP88_RS01045 IPR001227 Acyl transferase domain superfamily JCP88_RS01045 IPR006162 Phosphopantetheine attachment site JCP88_RS01045 IPR016039 Thiolase-like JCP88_RS01045 IPR042104 Polyketide synthase, dehydratase domain superfamily JCP88_RS01045 IPR013968 Polyketide synthase, ketoreductase domain JCP88_RS01045 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JCP88_RS01045 IPR036736 ACP-like superfamily JCP88_RS01045 IPR014043 Acyl transferase JCP88_RS01045 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JCP88_RS01045 IPR013154 Alcohol dehydrogenase, N-terminal JCP88_RS01045 IPR009081 Phosphopantetheine binding ACP domain JCP88_RS01045 IPR032821 Ketoacyl-synthetase, C-terminal extension JCP88_RS01045 IPR036291 NAD(P)-binding domain superfamily JCP88_RS01045 IPR011032 GroES-like superfamily JCP88_RS01045 IPR018201 Beta-ketoacyl synthase, active site JCP88_RS01045 IPR014031 Beta-ketoacyl synthase, C-terminal JCP88_RS01045 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JCP88_RS01045 IPR014030 Beta-ketoacyl synthase, N-terminal JCP88_RS01045 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JCP88_RS01050 IPR017501 Phage infection protein, YhgE, C-terminal JCP88_RS01050 IPR013525 ABC-2 type transporter JCP88_RS01050 IPR017500 Phage infection protein, YhgE, N-terminal JCP88_RS01055 IPR002293 Amino acid/polyamine transporter I JCP88_RS01080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS01080 IPR035906 MetI-like superfamily JCP88_RS01085 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain JCP88_RS01090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS01090 IPR035906 MetI-like superfamily JCP88_RS01095 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS01095 IPR005892 Glycine betaine transport ATP-binding subunit JCP88_RS01095 IPR000644 CBS domain JCP88_RS01095 IPR017871 ABC transporter, conserved site JCP88_RS01095 IPR003439 ABC transporter-like JCP88_RS01095 IPR003593 AAA+ ATPase domain JCP88_RS01100 IPR042118 QueA, domain 1 JCP88_RS01100 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily JCP88_RS01100 IPR042119 QueA, domain 2 JCP88_RS01100 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA JCP88_RS01105 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS01105 IPR023214 HAD superfamily JCP88_RS01105 IPR004014 Cation-transporting P-type ATPase, N-terminal JCP88_RS01105 IPR006068 Cation-transporting P-type ATPase, C-terminal JCP88_RS01105 IPR036412 HAD-like superfamily JCP88_RS01105 IPR008250 P-type ATPase, A domain superfamily JCP88_RS01105 IPR001757 P-type ATPase JCP88_RS01105 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS01105 IPR018303 P-type ATPase, phosphorylation site JCP88_RS01115 IPR002616 tRNA-guanine(15) transglycosylase-like JCP88_RS01115 IPR004803 tRNA-guanine transglycosylase JCP88_RS01115 IPR036511 Queuine tRNA-ribosyltransferase-like JCP88_RS01120 IPR003849 Preprotein translocase YajC JCP88_RS01125 IPR016162 Aldehyde dehydrogenase, N-terminal JCP88_RS01125 IPR016163 Aldehyde dehydrogenase, C-terminal JCP88_RS01125 IPR016161 Aldehyde/histidinol dehydrogenase JCP88_RS01125 IPR039697 Iron-type alcohol dehydrogenase-like JCP88_RS01125 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JCP88_RS01125 IPR015590 Aldehyde dehydrogenase domain JCP88_RS01125 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase JCP88_RS01125 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain JCP88_RS01125 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JCP88_RS01135 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS01135 IPR010905 Glycosyl hydrolase, family 88 JCP88_RS01135 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS01140 IPR004682 TRAP transporter solute receptor, DctP family JCP88_RS01140 IPR018389 TRAP transporter solute receptor DctP/TeaA JCP88_RS01140 IPR038404 TRAP transporter solute receptor DctP superfamily JCP88_RS01150 IPR004681 TRAP transporter large membrane protein DctM JCP88_RS01150 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JCP88_RS01165 IPR014710 RmlC-like jelly roll fold JCP88_RS01165 IPR003313 AraC-type arabinose-binding/dimerisation domain JCP88_RS01165 IPR009057 Homeobox-like domain superfamily JCP88_RS01165 IPR011051 RmlC-like cupin domain superfamily JCP88_RS01165 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS01170 IPR000577 Carbohydrate kinase, FGGY JCP88_RS01170 IPR013449 Rhamnulokinase JCP88_RS01170 IPR018484 Carbohydrate kinase, FGGY, N-terminal JCP88_RS01170 IPR018485 Carbohydrate kinase, FGGY, C-terminal JCP88_RS01175 IPR036237 Xylose isomerase-like superfamily JCP88_RS01175 IPR009308 Rhamnose isomerase JCP88_RS01180 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JCP88_RS01180 IPR013447 Rhamnulose-1-phosphate aldolase JCP88_RS01180 IPR001303 Class II aldolase/adducin N-terminal JCP88_RS01185 IPR013448 L-rhamnose mutarotase JCP88_RS01185 IPR008000 Rhamnose/fucose mutarotase JCP88_RS01185 IPR011008 Dimeric alpha-beta barrel JCP88_RS01190 IPR013460 Lactaldehyde reductase JCP88_RS01190 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JCP88_RS01190 IPR039697 Iron-type alcohol dehydrogenase-like JCP88_RS01190 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JCP88_RS01195 IPR005471 Transcription regulator IclR, N-terminal JCP88_RS01195 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS01195 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01195 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01195 IPR014757 Transcription regulator IclR, C-terminal JCP88_RS01195 IPR029016 GAF-like domain superfamily JCP88_RS01200 IPR013785 Aldolase-type TIM barrel JCP88_RS01200 IPR000887 KDPG/KHG aldolase JCP88_RS01200 IPR031337 KDPG/KHG aldolase, active site 1 JCP88_RS01200 IPR031338 KDPG/KHG aldolase, active site 2 JCP88_RS01210 IPR007045 5-keto 4-deoxyuronate isomerase JCP88_RS01210 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal JCP88_RS01210 IPR014710 RmlC-like jelly roll fold JCP88_RS01210 IPR011051 RmlC-like cupin domain superfamily JCP88_RS01210 IPR021120 KduI/IolB isomerase JCP88_RS01215 IPR036291 NAD(P)-binding domain superfamily JCP88_RS01215 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS01215 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS01220 IPR013785 Aldolase-type TIM barrel JCP88_RS01220 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent JCP88_RS01220 IPR000262 FMN-dependent dehydrogenase JCP88_RS01225 IPR036554 GHMP kinase, C-terminal domain superfamily JCP88_RS01225 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS01225 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS01225 IPR005917 Phosphomevalonate kinase, bacteria JCP88_RS01225 IPR035102 Phosphomevalonate kinase JCP88_RS01225 IPR013750 GHMP kinase, C-terminal domain JCP88_RS01225 IPR006204 GHMP kinase N-terminal domain JCP88_RS01235 IPR000705 Galactokinase JCP88_RS01235 IPR006203 GHMP kinase, ATP-binding, conserved site JCP88_RS01235 IPR019741 Galactokinase, conserved site JCP88_RS01235 IPR019539 Galactokinase galactose-binding domain JCP88_RS01235 IPR013750 GHMP kinase, C-terminal domain JCP88_RS01235 IPR036554 GHMP kinase, C-terminal domain superfamily JCP88_RS01235 IPR006204 GHMP kinase N-terminal domain JCP88_RS01235 IPR022963 Galactokinase, bacterial JCP88_RS01235 IPR006206 Mevalonate/galactokinase JCP88_RS01235 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS01235 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS01240 IPR002624 Deoxynucleoside kinase JCP88_RS01240 IPR031314 Deoxynucleoside kinase domain JCP88_RS01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS01255 IPR001207 Transposase, mutator type JCP88_RS01260 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily JCP88_RS01260 IPR019813 Translation initiation factor 3, conserved site JCP88_RS01260 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily JCP88_RS01260 IPR019815 Translation initiation factor 3, C-terminal JCP88_RS01260 IPR019814 Translation initiation factor 3, N-terminal JCP88_RS01260 IPR001288 Translation initiation factor 3 JCP88_RS01265 IPR001706 Ribosomal protein L35, non-mitochondrial JCP88_RS01265 IPR037229 Ribosomal protein L35 superfamily JCP88_RS01265 IPR021137 Ribosomal protein L35 JCP88_RS01265 IPR018265 Ribosomal protein L35, conserved site JCP88_RS01270 IPR035566 Ribosomal protein L20, C-terminal JCP88_RS01270 IPR005813 Ribosomal protein L20 JCP88_RS01280 IPR008040 Hydantoinaseoxoprolinase, N-terminal JCP88_RS01280 IPR002821 Hydantoinase A/oxoprolinase JCP88_RS01300 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family JCP88_RS01300 IPR006683 Thioesterase domain JCP88_RS01300 IPR029069 HotDog domain superfamily JCP88_RS01300 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site JCP88_RS01305 IPR017953 Carbohydrate kinase, predicted, conserved site JCP88_RS01305 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase JCP88_RS01305 IPR029056 Ribokinase-like JCP88_RS01310 IPR010964 Peptidase M20A, peptidase V-related JCP88_RS01310 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS01310 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JCP88_RS01310 IPR002933 Peptidase M20 JCP88_RS01310 IPR011291 Peptidase M20A, peptidase V JCP88_RS01315 IPR001173 Glycosyltransferase 2-like JCP88_RS01315 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS01325 IPR008007 Peptidase M42 JCP88_RS01325 IPR023367 Peptidase M42, domain 2 JCP88_RS01325 IPR017538 Peptidase M42, glutamyl aminopeptidase JCP88_RS01330 IPR013766 Thioredoxin domain JCP88_RS01330 IPR036249 Thioredoxin-like superfamily JCP88_RS01335 IPR006016 UspA JCP88_RS01335 IPR006015 Universal stress protein A family JCP88_RS01335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS01340 IPR027855 Domain of unknown function DUF4479 JCP88_RS01340 IPR037154 YtpR-like superfamily JCP88_RS01340 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain JCP88_RS01340 IPR002547 tRNA-binding domain JCP88_RS01340 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS01345 IPR012337 Ribonuclease H-like superfamily JCP88_RS01345 IPR001584 Integrase, catalytic core JCP88_RS01345 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS01350 IPR001478 PDZ domain JCP88_RS01350 IPR009003 Peptidase S1, PA clan JCP88_RS01350 IPR036034 PDZ superfamily JCP88_RS01350 IPR001940 Peptidase S1C JCP88_RS01355 IPR003742 RNA methyltransferase RlmH JCP88_RS01355 IPR029028 Alpha/beta knot methyltransferases JCP88_RS01355 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS01360 IPR009921 Domain of unknown function DUF1456 JCP88_RS01370 IPR036291 NAD(P)-binding domain superfamily JCP88_RS01370 IPR013332 Ketopantoate reductase, N-terminal domain JCP88_RS01370 IPR013752 Ketopantoate reductase, C-terminal domain JCP88_RS01370 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS01370 IPR003710 Ketopantoate reductase ApbA/PanE JCP88_RS01370 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS01385 IPR002569 Peptide methionine sulphoxide reductase MsrA JCP88_RS01385 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JCP88_RS01395 IPR000182 GNAT domain JCP88_RS01395 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS01445 IPR017850 Alkaline-phosphatase-like, core domain superfamily JCP88_RS01445 IPR000917 Sulfatase, N-terminal JCP88_RS01455 IPR036458 Sodium:dicarboxylate symporter superfamily JCP88_RS01455 IPR023025 Serine/threonine transporter SstT JCP88_RS01455 IPR001991 Sodium:dicarboxylate symporter JCP88_RS01465 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS01465 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain JCP88_RS01465 IPR001406 Pseudouridine synthase I, TruA JCP88_RS01465 IPR020095 Pseudouridine synthase I, TruA, C-terminal JCP88_RS01495 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JCP88_RS01495 IPR002569 Peptide methionine sulphoxide reductase MsrA JCP88_RS01500 IPR036812 NADP-dependent oxidoreductase domain superfamily JCP88_RS01500 IPR023210 NADP-dependent oxidoreductase domain JCP88_RS01505 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01505 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01505 IPR011711 GntR, C-terminal JCP88_RS01505 IPR008920 Transcription regulator FadR/GntR, C-terminal JCP88_RS01505 IPR000524 Transcription regulator HTH, GntR JCP88_RS01510 IPR003352 Phosphotransferase system, EIIC JCP88_RS01510 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS01510 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS01515 IPR017853 Glycoside hydrolase superfamily JCP88_RS01515 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS01515 IPR001360 Glycoside hydrolase family 1 JCP88_RS01520 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS01520 IPR036095 PTS system IIB component-like superfamily JCP88_RS01520 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS01525 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JCP88_RS01525 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JCP88_RS01545 IPR013154 Alcohol dehydrogenase, N-terminal JCP88_RS01545 IPR027399 Alcohol dehydrogenase GroES-associated JCP88_RS01545 IPR011032 GroES-like superfamily JCP88_RS01545 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JCP88_RS01545 IPR013149 Alcohol dehydrogenase, C-terminal JCP88_RS01545 IPR036291 NAD(P)-binding domain superfamily JCP88_RS01555 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS01555 IPR010354 Oleate hydratase JCP88_RS01580 IPR021115 Pyridoxal-phosphate binding site JCP88_RS01580 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS01580 IPR002129 Pyridoxal phosphate-dependent decarboxylase JCP88_RS01580 IPR022397 Tyrosine decarboxylase, bacteria JCP88_RS01590 IPR004841 Amino acid permease/ SLC12A domain JCP88_RS01590 IPR004840 Amino acid permease, conserved site JCP88_RS01595 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS01595 IPR006068 Cation-transporting P-type ATPase, C-terminal JCP88_RS01595 IPR004014 Cation-transporting P-type ATPase, N-terminal JCP88_RS01595 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS01595 IPR001757 P-type ATPase JCP88_RS01595 IPR023214 HAD superfamily JCP88_RS01595 IPR036412 HAD-like superfamily JCP88_RS01595 IPR008250 P-type ATPase, A domain superfamily JCP88_RS01595 IPR018303 P-type ATPase, phosphorylation site JCP88_RS01610 IPR005119 LysR, substrate-binding JCP88_RS01610 IPR037424 Regulatory protein NocR, PBP2 domain JCP88_RS01610 IPR000847 Transcription regulator HTH, LysR JCP88_RS01610 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01610 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01615 IPR001227 Acyl transferase domain superfamily JCP88_RS01615 IPR014043 Acyl transferase JCP88_RS01615 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JCP88_RS01615 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JCP88_RS01615 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type JCP88_RS01615 IPR024925 Malonyl CoA-acyl carrier protein transacylase JCP88_RS01620 IPR037171 NagB/RpiA transferase-like JCP88_RS01620 IPR005777 Acetyl-S-ACP:malonate ACP transferase JCP88_RS01625 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JCP88_RS01625 IPR009662 Malonate decarboxylase delta subunit JCP88_RS01630 IPR034733 Acetyl-CoA carboxylase JCP88_RS01630 IPR017556 Biotin-independent malonate decarboxylase, beta subunit JCP88_RS01630 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JCP88_RS01630 IPR029045 ClpP/crotonase-like domain superfamily JCP88_RS01635 IPR017557 Phosphoribosyl-dephospho-CoA transferase JCP88_RS01645 IPR017555 Triphosphoribosyl-dephospho-CoA synthase JCP88_RS01645 IPR002736 Triphosphoribosyl-dephospho-CoA protein JCP88_RS01655 IPR016152 Phosphotransferase/anion transporter JCP88_RS01655 IPR002178 PTS EIIA type-2 domain JCP88_RS01665 IPR004703 Phosphotransferase system, sugar-specific permease component JCP88_RS01675 IPR013785 Aldolase-type TIM barrel JCP88_RS01675 IPR000771 Fructose-bisphosphate aldolase, class-II JCP88_RS01675 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY JCP88_RS01675 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY JCP88_RS01685 IPR000086 NUDIX hydrolase domain JCP88_RS01685 IPR015797 NUDIX hydrolase-like domain superfamily JCP88_RS01690 IPR023187 Transcriptional regulator MarR-type, conserved site JCP88_RS01690 IPR000835 MarR-type HTH domain JCP88_RS01690 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01690 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01695 IPR000182 GNAT domain JCP88_RS01695 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS01715 IPR026033 Azaguanine-like transporters JCP88_RS01715 IPR006043 Xanthine/uracil/vitamin C permease JCP88_RS01720 IPR032091 Maltogenic Amylase, C-terminal JCP88_RS01720 IPR017853 Glycoside hydrolase superfamily JCP88_RS01720 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JCP88_RS01720 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS01725 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS01725 IPR017853 Glycoside hydrolase superfamily JCP88_RS01725 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS01725 IPR001360 Glycoside hydrolase family 1 JCP88_RS01735 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component JCP88_RS01735 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS01735 IPR036878 Glucose permease domain IIB JCP88_RS01735 IPR003352 Phosphotransferase system, EIIC JCP88_RS01735 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS01735 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS01735 IPR011055 Duplicated hybrid motif JCP88_RS01735 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS01740 IPR001360 Glycoside hydrolase family 1 JCP88_RS01740 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS01740 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS01740 IPR017853 Glycoside hydrolase superfamily JCP88_RS01750 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JCP88_RS01750 IPR013785 Aldolase-type TIM barrel JCP88_RS01760 IPR023753 FAD/NAD(P)-binding domain JCP88_RS01760 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS01760 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS01760 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS01770 IPR005999 Glycerol kinase JCP88_RS01770 IPR018484 Carbohydrate kinase, FGGY, N-terminal JCP88_RS01770 IPR018483 Carbohydrate kinase, FGGY, conserved site JCP88_RS01770 IPR000577 Carbohydrate kinase, FGGY JCP88_RS01770 IPR018485 Carbohydrate kinase, FGGY, C-terminal JCP88_RS01775 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase JCP88_RS01775 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS01775 IPR006076 FAD dependent oxidoreductase JCP88_RS01775 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily JCP88_RS01775 IPR031656 Alpha-glycerophosphate oxidase, C-terminal JCP88_RS01780 IPR023271 Aquaporin-like JCP88_RS01780 IPR022357 Major intrinsic protein, conserved site JCP88_RS01780 IPR000425 Major intrinsic protein JCP88_RS01790 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JCP88_RS01790 IPR000462 CDP-alcohol phosphatidyltransferase JCP88_RS01800 IPR038390 Metal-sensitive transcriptional repressor superfamily JCP88_RS01800 IPR003735 Metal-sensitive transcriptional repressor JCP88_RS01805 IPR001763 Rhodanese-like domain JCP88_RS01805 IPR036873 Rhodanese-like domain superfamily JCP88_RS01810 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS01810 IPR023753 FAD/NAD(P)-binding domain JCP88_RS01810 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS01810 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS01810 IPR023536 Coenzyme A disulphide reductase, staphyolococci JCP88_RS01810 IPR017758 Coenzyme A disulphide reductase JCP88_RS01815 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS01815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS01815 IPR000212 DNA helicase, UvrD/REP type JCP88_RS01815 IPR027785 UvrD-like helicase C-terminal domain JCP88_RS01825 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS01825 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA JCP88_RS01825 IPR001173 Glycosyltransferase 2-like JCP88_RS01835 IPR035439 UPF0145 domain superfamily JCP88_RS01835 IPR002765 Uncharacterised protein family UPF0145 JCP88_RS01845 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM JCP88_RS01845 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS01845 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain JCP88_RS01845 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS01850 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 JCP88_RS01850 IPR004006 DhaK domain JCP88_RS01855 IPR036117 DhaL domain superfamily JCP88_RS01855 IPR004007 DhaL domain JCP88_RS01855 IPR012737 Dihydroxyacetone kinase, subunit L JCP88_RS01860 IPR019722 Glucose-6-phosphate 1-dehydrogenase, bacterial JCP88_RS01865 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01865 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01865 IPR012318 Crp-type HTH domain JCP88_RS01865 IPR014710 RmlC-like jelly roll fold JCP88_RS01865 IPR000595 Cyclic nucleotide-binding domain JCP88_RS01865 IPR018335 Transcription regulator HTH, Crp-type, conserved site JCP88_RS01865 IPR018490 Cyclic nucleotide-binding-like JCP88_RS01875 IPR003593 AAA+ ATPase domain JCP88_RS01875 IPR003439 ABC transporter-like JCP88_RS01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS01875 IPR025302 Domain of unknown function DUF4162 JCP88_RS01875 IPR017871 ABC transporter, conserved site JCP88_RS01880 IPR011075 Tetracyclin repressor-like, C-terminal domain JCP88_RS01880 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JCP88_RS01880 IPR009057 Homeobox-like domain superfamily JCP88_RS01880 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS01890 IPR036986 RNA-binding S4 domain superfamily JCP88_RS01890 IPR002942 RNA-binding S4 domain JCP88_RS01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS01890 IPR002305 Aminoacyl-tRNA synthetase, class Ic JCP88_RS01890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS01890 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 JCP88_RS01890 IPR024088 Tyrosine-tRNA ligase, bacterial-type JCP88_RS01890 IPR002307 Tyrosine-tRNA ligase JCP88_RS01895 IPR022397 Tyrosine decarboxylase, bacteria JCP88_RS01895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS01895 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS01895 IPR002129 Pyridoxal phosphate-dependent decarboxylase JCP88_RS01900 IPR002293 Amino acid/polyamine transporter I JCP88_RS01910 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS01910 IPR000843 LacI-type HTH domain JCP88_RS01910 IPR001761 Periplasmic binding protein/LacI sugar binding domain JCP88_RS01910 IPR028082 Periplasmic binding protein-like I JCP88_RS01920 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS01920 IPR023214 HAD superfamily JCP88_RS01920 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS01920 IPR006439 HAD hydrolase, subfamily IA JCP88_RS01920 IPR036412 HAD-like superfamily JCP88_RS01920 IPR010972 Beta-phosphoglucomutase JCP88_RS01920 IPR010976 Beta-phosphoglucomutase hydrolase JCP88_RS01925 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS01925 IPR005195 Glycoside hydrolase, family 65, central catalytic JCP88_RS01925 IPR005196 Glycoside hydrolase, family 65, N-terminal JCP88_RS01925 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JCP88_RS01925 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase JCP88_RS01925 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS01925 IPR005194 Glycoside hydrolase family 65, C-terminal JCP88_RS01925 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS01930 IPR011055 Duplicated hybrid motif JCP88_RS01930 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS01930 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS01930 IPR036878 Glucose permease domain IIB JCP88_RS01930 IPR011300 Phosphotransferase system, IIBC component JCP88_RS01930 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS01930 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS01930 IPR003352 Phosphotransferase system, EIIC JCP88_RS01935 IPR005135 Endonuclease/exonuclease/phosphatase JCP88_RS01935 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JCP88_RS01955 IPR012674 Calycin JCP88_RS01955 IPR008729 Phenolic acid decarboxylase JCP88_RS01960 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS01960 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS01960 IPR018309 Transcription regulator PadR, C-terminal JCP88_RS01960 IPR005149 Transcription regulator PadR, N-terminal JCP88_RS01970 IPR036259 MFS transporter superfamily JCP88_RS01970 IPR020846 Major facilitator superfamily domain JCP88_RS01970 IPR011701 Major facilitator superfamily JCP88_RS01970 IPR004638 Drug resistance transporter EmrB-like JCP88_RS01990 IPR036551 Flavin prenyltransferase-like JCP88_RS01990 IPR003382 Flavoprotein JCP88_RS01990 IPR004507 Flavin prenyltransferase UbiX-like JCP88_RS01995 IPR002830 UbiD decarboxylyase family JCP88_RS02005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02005 IPR003593 AAA+ ATPase domain JCP88_RS02005 IPR003838 ABC transporter permease protein domain JCP88_RS02005 IPR025857 MacB-like periplasmic core domain JCP88_RS02005 IPR017871 ABC transporter, conserved site JCP88_RS02005 IPR003439 ABC transporter-like JCP88_RS02005 IPR017911 ABC transporter, macrolide export, ATP-binding domain JCP88_RS02010 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02010 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS02010 IPR011006 CheY-like superfamily JCP88_RS02010 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS02010 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS02015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS02015 IPR005467 Histidine kinase domain JCP88_RS02015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS02015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS02015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS02015 IPR011006 CheY-like superfamily JCP88_RS02015 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS02015 IPR029151 Periplasmic sensor-like domain superfamily JCP88_RS02015 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS02015 IPR015387 LuxQ, periplasmic JCP88_RS02020 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02020 IPR005119 LysR, substrate-binding JCP88_RS02020 IPR000847 Transcription regulator HTH, LysR JCP88_RS02020 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS02020 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain JCP88_RS02025 IPR007563 Protein of unknown function DUF554 JCP88_RS02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02060 IPR003593 AAA+ ATPase domain JCP88_RS02060 IPR003439 ABC transporter-like JCP88_RS02070 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS02070 IPR014718 Glycoside hydrolase-type carbohydrate-binding JCP88_RS02070 IPR018052 Aldose 1-epimerase, conserved site JCP88_RS02070 IPR015443 Aldose 1-epimerase JCP88_RS02070 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JCP88_RS02075 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS02075 IPR007921 CHAP domain JCP88_RS02075 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS02080 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS02080 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS02080 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS02080 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JCP88_RS02080 IPR003352 Phosphotransferase system, EIIC JCP88_RS02080 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS02080 IPR011055 Duplicated hybrid motif JCP88_RS02080 IPR036878 Glucose permease domain IIB JCP88_RS02080 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component JCP88_RS02085 IPR023064 D-ribose pyranase JCP88_RS02085 IPR023750 RbsD-like superfamily JCP88_RS02085 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU JCP88_RS02090 IPR004788 Ribose 5-phosphate isomerase, type A JCP88_RS02090 IPR029056 Ribokinase-like JCP88_RS02090 IPR037171 NagB/RpiA transferase-like JCP88_RS02090 IPR011611 Carbohydrate kinase PfkB JCP88_RS02090 IPR002139 Ribokinase/fructokinase JCP88_RS02090 IPR011877 Ribokinase JCP88_RS02095 IPR023588 Transcription regulator HTH, PurR JCP88_RS02095 IPR000843 LacI-type HTH domain JCP88_RS02095 IPR028082 Periplasmic binding protein-like I JCP88_RS02095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS02100 IPR036380 Isochorismatase-like superfamily JCP88_RS02100 IPR000868 Isochorismatase-like JCP88_RS02105 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02105 IPR003593 AAA+ ATPase domain JCP88_RS02105 IPR003439 ABC transporter-like JCP88_RS02105 IPR017871 ABC transporter, conserved site JCP88_RS02115 IPR012769 Trehalose-6-phosphate hydrolase JCP88_RS02115 IPR032091 Maltogenic Amylase, C-terminal JCP88_RS02115 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS02115 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JCP88_RS02115 IPR017853 Glycoside hydrolase superfamily JCP88_RS02120 IPR002549 Transmembrane protein TqsA-like JCP88_RS02125 IPR012674 Calycin JCP88_RS02125 IPR006129 Adhesin B JCP88_RS02125 IPR006127 Periplasmic solute binding protein, ZnuA-like JCP88_RS02125 IPR006128 Adhesion lipoprotein JCP88_RS02125 IPR015304 ZinT domain JCP88_RS02130 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS02130 IPR007492 LytTR DNA-binding domain JCP88_RS02130 IPR011006 CheY-like superfamily JCP88_RS02140 IPR006741 Accessory gene regulator B JCP88_RS02150 IPR002624 Deoxynucleoside kinase JCP88_RS02150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02150 IPR031314 Deoxynucleoside kinase domain JCP88_RS02160 IPR000212 DNA helicase, UvrD/REP type JCP88_RS02160 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS02160 IPR013986 DExx box DNA helicase domain superfamily JCP88_RS02160 IPR014017 UvrD-like DNA helicase, C-terminal JCP88_RS02160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02160 IPR034739 UvrD/AddA helicase, N-terminal JCP88_RS02170 IPR006660 Arsenate reductase-like JCP88_RS02170 IPR023731 Regulatory protein Spx JCP88_RS02170 IPR036249 Thioredoxin-like superfamily JCP88_RS02170 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS02175 IPR036249 Thioredoxin-like superfamily JCP88_RS02175 IPR006660 Arsenate reductase-like JCP88_RS02175 IPR023731 Regulatory protein Spx JCP88_RS02175 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS02180 IPR036397 Ribonuclease H superfamily JCP88_RS02180 IPR012337 Ribonuclease H-like superfamily JCP88_RS02180 IPR001584 Integrase, catalytic core JCP88_RS02180 IPR038965 Transposase InsF-like JCP88_RS02180 IPR025948 HTH-like domain JCP88_RS02185 IPR009057 Homeobox-like domain superfamily JCP88_RS02205 IPR036249 Thioredoxin-like superfamily JCP88_RS02205 IPR000889 Glutathione peroxidase JCP88_RS02205 IPR029759 Glutathione peroxidase active site JCP88_RS02205 IPR029760 Glutathione peroxidase conserved site JCP88_RS02210 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JCP88_RS02210 IPR003815 S-ribosylhomocysteinase (LuxS) JCP88_RS02210 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily JCP88_RS02215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS02215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS02215 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS02215 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme JCP88_RS02225 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JCP88_RS02225 IPR001926 Pyridoxal-phosphate dependent enzyme JCP88_RS02225 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JCP88_RS02230 IPR015365 Elongation factor P, C-terminal JCP88_RS02230 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS02230 IPR014722 Ribosomal protein L2, domain 2 JCP88_RS02230 IPR013185 Translation elongation factor, KOW-like JCP88_RS02230 IPR001059 Translation elongation factor P/YeiP, central JCP88_RS02230 IPR013852 Translation elongation factor P/YeiP, conserved site JCP88_RS02230 IPR011768 Translation elongation factor P JCP88_RS02230 IPR008991 Translation protein SH3-like domain superfamily JCP88_RS02230 IPR020599 Translation elongation factor P/YeiP JCP88_RS02240 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JCP88_RS02240 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JCP88_RS02240 IPR002986 Diaminopimelate decarboxylase, LysA JCP88_RS02240 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site JCP88_RS02240 IPR029066 PLP-binding barrel JCP88_RS02240 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JCP88_RS02240 IPR000183 Ornithine/DAP/Arg decarboxylase JCP88_RS02240 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JCP88_RS02245 IPR001653 Diaminopimelate epimerase, DapF JCP88_RS02245 IPR018510 Diaminopimelate epimerase, active site JCP88_RS02250 IPR002220 DapA-like JCP88_RS02250 IPR020624 Schiff base-forming aldolase, conserved site JCP88_RS02250 IPR020625 Schiff base-forming aldolase, active site JCP88_RS02250 IPR013785 Aldolase-type TIM barrel JCP88_RS02250 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA JCP88_RS02255 IPR022663 Dihydrodipicolinate reductase, C-terminal JCP88_RS02255 IPR022664 Dihydrodipicolinate reductase, conserved site JCP88_RS02255 IPR000846 Dihydrodipicolinate reductase, N-terminal JCP88_RS02255 IPR023940 Dihydrodipicolinate reductase JCP88_RS02255 IPR036291 NAD(P)-binding domain superfamily JCP88_RS02260 IPR011004 Trimeric LpxA-like superfamily JCP88_RS02260 IPR018357 Hexapeptide transferase, conserved site JCP88_RS02260 IPR001451 Hexapeptide repeat JCP88_RS02260 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH JCP88_RS02260 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal JCP88_RS02265 IPR012280 Semialdehyde dehydrogenase, dimerisation domain JCP88_RS02265 IPR000534 Semialdehyde dehydrogenase, NAD-binding JCP88_RS02265 IPR036291 NAD(P)-binding domain superfamily JCP88_RS02265 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type JCP88_RS02265 IPR012080 Aspartate-semialdehyde dehydrogenase JCP88_RS02265 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site JCP88_RS02270 IPR002912 ACT domain JCP88_RS02270 IPR005260 Aspartate kinase, monofunctional class JCP88_RS02270 IPR001341 Aspartate kinase JCP88_RS02270 IPR018042 Aspartate kinase, conserved site JCP88_RS02270 IPR027795 CASTOR, ACT domain JCP88_RS02270 IPR001048 Aspartate/glutamate/uridylate kinase JCP88_RS02270 IPR035804 Aspartokinase 3, N-terminal JCP88_RS02270 IPR036393 Acetylglutamate kinase-like superfamily JCP88_RS02275 IPR023905 Acetyldiaminopimelate deacetylase JCP88_RS02275 IPR017439 Amidohydrolase JCP88_RS02275 IPR002933 Peptidase M20 JCP88_RS02275 IPR011650 Peptidase M20, dimerisation domain JCP88_RS02275 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS02280 IPR004839 Aminotransferase, class I/classII JCP88_RS02280 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JCP88_RS02280 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS02280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS02280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS02285 IPR023753 FAD/NAD(P)-binding domain JCP88_RS02285 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS02285 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS02285 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS02305 IPR017961 DNA polymerase, Y-family, little finger domain JCP88_RS02305 IPR001126 UmuC domain JCP88_RS02305 IPR024728 DNA polymerase type-Y, HhH motif JCP88_RS02305 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JCP88_RS02310 IPR006206 Mevalonate/galactokinase JCP88_RS02310 IPR006203 GHMP kinase, ATP-binding, conserved site JCP88_RS02310 IPR006204 GHMP kinase N-terminal domain JCP88_RS02310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS02310 IPR000705 Galactokinase JCP88_RS02310 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS02310 IPR036554 GHMP kinase, C-terminal domain superfamily JCP88_RS02310 IPR022963 Galactokinase, bacterial JCP88_RS02310 IPR019741 Galactokinase, conserved site JCP88_RS02310 IPR013750 GHMP kinase, C-terminal domain JCP88_RS02310 IPR019539 Galactokinase galactose-binding domain JCP88_RS02315 IPR014718 Glycoside hydrolase-type carbohydrate-binding JCP88_RS02315 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS02315 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JCP88_RS02315 IPR015443 Aldose 1-epimerase JCP88_RS02315 IPR018052 Aldose 1-epimerase, conserved site JCP88_RS02320 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS02320 IPR001927 Sodium:galactoside symporter JCP88_RS02320 IPR011055 Duplicated hybrid motif JCP88_RS02320 IPR039672 Lactose permease-like JCP88_RS02320 IPR036259 MFS transporter superfamily JCP88_RS02320 IPR018043 Sodium:galactoside symporter, conserved site JCP88_RS02325 IPR003313 AraC-type arabinose-binding/dimerisation domain JCP88_RS02325 IPR009057 Homeobox-like domain superfamily JCP88_RS02325 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS02325 IPR018062 HTH domain AraC-type, conserved site JCP88_RS02325 IPR020449 Transcription regulator HTH, AraC- type JCP88_RS02325 IPR037923 Transcription regulator HTH-like JCP88_RS02330 IPR003680 Flavodoxin-like fold JCP88_RS02330 IPR029039 Flavoprotein-like superfamily JCP88_RS02345 IPR004840 Amino acid permease, conserved site JCP88_RS02345 IPR004841 Amino acid permease/ SLC12A domain JCP88_RS02350 IPR003439 ABC transporter-like JCP88_RS02350 IPR017871 ABC transporter, conserved site JCP88_RS02350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02350 IPR003593 AAA+ ATPase domain JCP88_RS02355 IPR001626 ABC transporter, TroCD-like JCP88_RS02355 IPR037294 ABC transporter, BtuC-like JCP88_RS02360 IPR006129 Adhesin B JCP88_RS02360 IPR006127 Periplasmic solute binding protein, ZnuA-like JCP88_RS02360 IPR006128 Adhesion lipoprotein JCP88_RS02370 IPR013542 Domain of unknown function DUF1730 JCP88_RS02370 IPR004155 PBS lyase HEAT-like repeat JCP88_RS02370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JCP88_RS02370 IPR004453 Epoxyqueuosine reductase QueG JCP88_RS02370 IPR016024 Armadillo-type fold JCP88_RS02370 IPR011989 Armadillo-like helical JCP88_RS02370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JCP88_RS02375 IPR007055 BON domain JCP88_RS02375 IPR036779 LysM domain superfamily JCP88_RS02375 IPR014004 Transport-associated and nodulation domain, bacteria JCP88_RS02375 IPR018392 LysM domain JCP88_RS02385 IPR006076 FAD dependent oxidoreductase JCP88_RS02385 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS02390 IPR011701 Major facilitator superfamily JCP88_RS02390 IPR036259 MFS transporter superfamily JCP88_RS02390 IPR004638 Drug resistance transporter EmrB-like JCP88_RS02390 IPR020846 Major facilitator superfamily domain JCP88_RS02400 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS02400 IPR001669 Arginine repressor JCP88_RS02400 IPR020899 Arginine repressor, C-terminal JCP88_RS02400 IPR020900 Arginine repressor, DNA-binding domain JCP88_RS02400 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02400 IPR036251 Arginine repressor, C-terminal domain superfamily JCP88_RS02405 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JCP88_RS02405 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JCP88_RS02405 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JCP88_RS02405 IPR005843 Alpha-D-phosphohexomutase, C-terminal JCP88_RS02405 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JCP88_RS02405 IPR016066 Alpha-D-phosphohexomutase, conserved site JCP88_RS02405 IPR005841 Alpha-D-phosphohexomutase superfamily JCP88_RS02405 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JCP88_RS02415 IPR019953 Organic hydroperoxide resistance protein famiy JCP88_RS02415 IPR036102 OsmC/Ohr superfamily JCP88_RS02415 IPR003718 OsmC/Ohr family JCP88_RS02415 IPR015946 K homology domain-like, alpha/beta JCP88_RS02420 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS02420 IPR023753 FAD/NAD(P)-binding domain JCP88_RS02420 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS02420 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JCP88_RS02420 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JCP88_RS02420 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS02425 IPR000868 Isochorismatase-like JCP88_RS02425 IPR036380 Isochorismatase-like superfamily JCP88_RS02430 IPR009057 Homeobox-like domain superfamily JCP88_RS02430 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS02430 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JCP88_RS02430 IPR011075 Tetracyclin repressor-like, C-terminal domain JCP88_RS02440 IPR003738 SOS response associated peptidase (SRAP) JCP88_RS02440 IPR036590 SOS response associated peptidase-like JCP88_RS02475 IPR012347 Ferritin-like JCP88_RS02475 IPR009078 Ferritin-like superfamily JCP88_RS02475 IPR007760 Manganese catalase JCP88_RS02475 IPR027407 Manganese catalase, C-terminal JCP88_RS02475 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain JCP88_RS02480 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS02485 IPR035906 MetI-like superfamily JCP88_RS02485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS02490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS02490 IPR035906 MetI-like superfamily JCP88_RS02530 IPR011006 CheY-like superfamily JCP88_RS02530 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS02530 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS02530 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS02530 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS02530 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS02535 IPR005467 Histidine kinase domain JCP88_RS02535 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS02535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS02540 IPR010651 Sugar transport protein JCP88_RS02545 IPR002293 Amino acid/polyamine transporter I JCP88_RS02550 IPR008863 Toxic anion resistance JCP88_RS02560 IPR000086 NUDIX hydrolase domain JCP88_RS02560 IPR020084 NUDIX hydrolase, conserved site JCP88_RS02560 IPR015797 NUDIX hydrolase-like domain superfamily JCP88_RS02560 IPR004385 Nucleoside diphosphate pyrophosphatase JCP88_RS02570 IPR010049 MTA/SAH nucleosidase JCP88_RS02570 IPR000845 Nucleoside phosphorylase domain JCP88_RS02570 IPR035994 Nucleoside phosphorylase superfamily JCP88_RS02575 IPR000868 Isochorismatase-like JCP88_RS02575 IPR036380 Isochorismatase-like superfamily JCP88_RS02580 IPR039448 Right handed beta helix domain JCP88_RS02580 IPR012334 Pectin lyase fold JCP88_RS02580 IPR011050 Pectin lyase fold/virulence factor JCP88_RS02585 IPR018497 Peptidase M13, C-terminal domain JCP88_RS02585 IPR000718 Peptidase M13 JCP88_RS02585 IPR024079 Metallopeptidase, catalytic domain superfamily JCP88_RS02585 IPR042089 Peptidase M13, domain 2 JCP88_RS02585 IPR008753 Peptidase M13, N-terminal domain JCP88_RS02595 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JCP88_RS02595 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site JCP88_RS02595 IPR000836 Phosphoribosyltransferase domain JCP88_RS02595 IPR029057 Phosphoribosyltransferase-like JCP88_RS02595 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type JCP88_RS02595 IPR005946 Ribose-phosphate pyrophosphokinase JCP88_RS02600 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS02600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS02600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS02600 IPR016454 Cysteine desulfurase JCP88_RS02600 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JCP88_RS02600 IPR000192 Aminotransferase class V domain JCP88_RS02610 IPR004751 Drug antiporter protein JCP88_RS02610 IPR020846 Major facilitator superfamily domain JCP88_RS02610 IPR036259 MFS transporter superfamily JCP88_RS02610 IPR011701 Major facilitator superfamily JCP88_RS02620 IPR023382 Adenine nucleotide alpha hydrolase-like domains JCP88_RS02620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS02620 IPR004506 tRNA-specific 2-thiouridylase JCP88_RS02625 IPR002293 Amino acid/polyamine transporter I JCP88_RS02625 IPR004754 Amino acid antiporter JCP88_RS02625 IPR022461 Arginine/ornithine antiporter JCP88_RS02630 IPR004839 Aminotransferase, class I/classII JCP88_RS02630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS02630 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JCP88_RS02630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS02630 IPR005861 Histidinol-phosphate aminotransferase family JCP88_RS02630 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS02635 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JCP88_RS02635 IPR036259 MFS transporter superfamily JCP88_RS02635 IPR020846 Major facilitator superfamily domain JCP88_RS02635 IPR011701 Major facilitator superfamily JCP88_RS02635 IPR023692 Multidrug resistance protein MdtG JCP88_RS02650 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JCP88_RS02650 IPR006171 TOPRIM domain JCP88_RS02650 IPR005738 DNA topoisomerase III JCP88_RS02650 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JCP88_RS02650 IPR023405 DNA topoisomerase, type IA, core domain JCP88_RS02650 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JCP88_RS02650 IPR013497 DNA topoisomerase, type IA, central JCP88_RS02650 IPR023406 DNA topoisomerase, type IA, active site JCP88_RS02650 IPR003601 DNA topoisomerase, type IA, domain 2 JCP88_RS02650 IPR000380 DNA topoisomerase, type IA JCP88_RS02650 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JCP88_RS02650 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JCP88_RS02655 IPR001173 Glycosyltransferase 2-like JCP88_RS02655 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS02660 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JCP88_RS02660 IPR023546 Methylated-DNA--protein-cysteine methyltransferase JCP88_RS02660 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JCP88_RS02660 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JCP88_RS02660 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily JCP88_RS02660 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain JCP88_RS02660 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02665 IPR018383 Uncharacterised protein family UPF0324, prokaryote JCP88_RS02675 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS02675 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02675 IPR005119 LysR, substrate-binding JCP88_RS02675 IPR000847 Transcription regulator HTH, LysR JCP88_RS02680 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JCP88_RS02680 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB JCP88_RS02680 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JCP88_RS02685 IPR006660 Arsenate reductase-like JCP88_RS02685 IPR036249 Thioredoxin-like superfamily JCP88_RS02685 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS02690 IPR002930 Glycine cleavage system H-protein JCP88_RS02690 IPR000089 Biotin/lipoyl attachment JCP88_RS02690 IPR011053 Single hybrid motif JCP88_RS02690 IPR033753 Glycine cleavage system H-protein/Simiate JCP88_RS02690 IPR017453 Glycine cleavage system H-protein, subgroup JCP88_RS02690 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JCP88_RS02695 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02695 IPR018449 NIL domain JCP88_RS02695 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain JCP88_RS02695 IPR003439 ABC transporter-like JCP88_RS02695 IPR017871 ABC transporter, conserved site JCP88_RS02695 IPR003593 AAA+ ATPase domain JCP88_RS02695 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal JCP88_RS02700 IPR035906 MetI-like superfamily JCP88_RS02700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS02705 IPR004872 Lipoprotein NlpA family JCP88_RS02710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02710 IPR017871 ABC transporter, conserved site JCP88_RS02710 IPR003439 ABC transporter-like JCP88_RS02710 IPR003593 AAA+ ATPase domain JCP88_RS02710 IPR010230 FeS cluster assembly SUF system, ATPase SufC JCP88_RS02715 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JCP88_RS02715 IPR011542 SUF system FeS cluster assembly, SufD JCP88_RS02715 IPR000825 SUF system FeS cluster assembly, SufBD JCP88_RS02720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS02720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS02720 IPR016454 Cysteine desulfurase JCP88_RS02720 IPR010970 Cysteine desulfurase, SufS JCP88_RS02720 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JCP88_RS02720 IPR000192 Aminotransferase class V domain JCP88_RS02720 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS02725 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JCP88_RS02730 IPR010231 SUF system FeS cluster assembly, SufB JCP88_RS02730 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JCP88_RS02730 IPR000825 SUF system FeS cluster assembly, SufBD JCP88_RS02735 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS02735 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS02735 IPR002104 Integrase, catalytic domain JCP88_RS02735 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS02735 IPR010998 Integrase/recombinase, N-terminal JCP88_RS02780 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JCP88_RS02780 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JCP88_RS02780 IPR003356 DNA methylase, adenine-specific JCP88_RS02780 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JCP88_RS02780 IPR004546 Restriction endonuclease, type I, HsdM JCP88_RS02780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS02790 IPR040980 SWI2/SNF2 ATPase JCP88_RS02790 IPR004473 Restriction endonuclease, type I, HsdR JCP88_RS02790 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal JCP88_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02790 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS02790 IPR022625 Type-1 restriction enzyme R protein, C-terminal JCP88_RS02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02810 IPR025857 MacB-like periplasmic core domain JCP88_RS02810 IPR017871 ABC transporter, conserved site JCP88_RS02810 IPR003593 AAA+ ATPase domain JCP88_RS02810 IPR003439 ABC transporter-like JCP88_RS02810 IPR003838 ABC transporter permease protein domain JCP88_RS02810 IPR017911 ABC transporter, macrolide export, ATP-binding domain JCP88_RS02820 IPR023059 Foldase protein PrsA JCP88_RS02820 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JCP88_RS02820 IPR027304 Trigger factor/SurA domain superfamily JCP88_RS02830 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JCP88_RS02830 IPR001206 Diacylglycerol kinase, catalytic domain JCP88_RS02830 IPR005218 Diacylglycerol/lipid kinase JCP88_RS02830 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JCP88_RS02865 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS02865 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02865 IPR002577 Helix-turn-helix, HxlR type JCP88_RS02875 IPR005754 Sortase family JCP88_RS02875 IPR042007 Sortase A JCP88_RS02875 IPR023365 Sortase domain superfamily JCP88_RS02880 IPR004341 CAT RNA-binding domain JCP88_RS02880 IPR011608 PRD domain JCP88_RS02880 IPR036650 CAT RNA-binding domain superfamily JCP88_RS02880 IPR001550 Transcription antiterminator, conserved site JCP88_RS02880 IPR036634 PRD domain superfamily JCP88_RS02885 IPR011055 Duplicated hybrid motif JCP88_RS02885 IPR036878 Glucose permease domain IIB JCP88_RS02885 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS02885 IPR003352 Phosphotransferase system, EIIC JCP88_RS02885 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS02885 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component JCP88_RS02885 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS02885 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JCP88_RS02885 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS02890 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS02890 IPR017853 Glycoside hydrolase superfamily JCP88_RS02890 IPR001360 Glycoside hydrolase family 1 JCP88_RS02890 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS02895 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS02895 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS02895 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS02895 IPR000524 Transcription regulator HTH, GntR JCP88_RS02895 IPR011663 UbiC transcription regulator-associated JCP88_RS02905 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG JCP88_RS02905 IPR031100 LOG family JCP88_RS02915 IPR002624 Deoxynucleoside kinase JCP88_RS02915 IPR031314 Deoxynucleoside kinase domain JCP88_RS02915 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02930 IPR001761 Periplasmic binding protein/LacI sugar binding domain JCP88_RS02930 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS02930 IPR023588 Transcription regulator HTH, PurR JCP88_RS02930 IPR028082 Periplasmic binding protein-like I JCP88_RS02930 IPR000843 LacI-type HTH domain JCP88_RS02935 IPR017853 Glycoside hydrolase superfamily JCP88_RS02935 IPR001360 Glycoside hydrolase family 1 JCP88_RS02935 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS02945 IPR000917 Sulfatase, N-terminal JCP88_RS02945 IPR012160 Lipoteichoic acid synthase-like JCP88_RS02945 IPR017850 Alkaline-phosphatase-like, core domain superfamily JCP88_RS02955 IPR034907 Nucleoside diphosphate kinase-like domain JCP88_RS02955 IPR001564 Nucleoside diphosphate kinase JCP88_RS02955 IPR036850 Nucleoside diphosphate kinase-like domain superfamily JCP88_RS02960 IPR036412 HAD-like superfamily JCP88_RS02960 IPR008250 P-type ATPase, A domain superfamily JCP88_RS02960 IPR006415 P-type ATPase, subfamily IIIB JCP88_RS02960 IPR004014 Cation-transporting P-type ATPase, N-terminal JCP88_RS02960 IPR001757 P-type ATPase JCP88_RS02960 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS02960 IPR023214 HAD superfamily JCP88_RS02960 IPR006068 Cation-transporting P-type ATPase, C-terminal JCP88_RS02960 IPR018303 P-type ATPase, phosphorylation site JCP88_RS02960 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS02965 IPR036412 HAD-like superfamily JCP88_RS02965 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS02965 IPR006439 HAD hydrolase, subfamily IA JCP88_RS02965 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS02965 IPR023214 HAD superfamily JCP88_RS02970 IPR003593 AAA+ ATPase domain JCP88_RS02970 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS02970 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal JCP88_RS02970 IPR017871 ABC transporter, conserved site JCP88_RS02970 IPR003439 ABC transporter-like JCP88_RS02970 IPR026253 Methionine import ATP-binding protein MetN JCP88_RS02970 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain JCP88_RS02970 IPR018449 NIL domain JCP88_RS02975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS02975 IPR035906 MetI-like superfamily JCP88_RS02980 IPR004872 Lipoprotein NlpA family JCP88_RS02985 IPR002933 Peptidase M20 JCP88_RS02985 IPR017439 Amidohydrolase JCP88_RS02985 IPR011650 Peptidase M20, dimerisation domain JCP88_RS02985 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS02990 IPR004770 Na+/H+ antiporter NhaC JCP88_RS02990 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JCP88_RS03005 IPR004841 Amino acid permease/ SLC12A domain JCP88_RS03015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS03015 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03015 IPR013332 Ketopantoate reductase, N-terminal domain JCP88_RS03015 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS03015 IPR013752 Ketopantoate reductase, C-terminal domain JCP88_RS03015 IPR003710 Ketopantoate reductase ApbA/PanE JCP88_RS03020 IPR018193 Glycerate kinase, flavodoxin-like fold JCP88_RS03020 IPR004381 Glycerate kinase JCP88_RS03020 IPR036129 Glycerate kinase superfamily JCP88_RS03020 IPR018197 Glycerate kinase, restriction-enzyme-like fold JCP88_RS03025 IPR017871 ABC transporter, conserved site JCP88_RS03025 IPR003593 AAA+ ATPase domain JCP88_RS03025 IPR032781 ABC-transporter extension domain JCP88_RS03025 IPR003439 ABC transporter-like JCP88_RS03025 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03030 IPR005952 Phosphoglycerate mutase 1 JCP88_RS03030 IPR029033 Histidine phosphatase superfamily JCP88_RS03030 IPR013078 Histidine phosphatase superfamily, clade-1 JCP88_RS03030 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JCP88_RS03040 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein JCP88_RS03040 IPR005486 Glucokinase regulatory protein, conserved site JCP88_RS03040 IPR001347 Sugar isomerase (SIS) JCP88_RS03040 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ JCP88_RS03045 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS03045 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS03045 IPR003352 Phosphotransferase system, EIIC JCP88_RS03045 IPR036878 Glucose permease domain IIB JCP88_RS03045 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS03050 IPR029039 Flavoprotein-like superfamily JCP88_RS03050 IPR004465 Ribonucleotide reductase Class Ib, NrdI JCP88_RS03055 IPR022461 Arginine/ornithine antiporter JCP88_RS03055 IPR004754 Amino acid antiporter JCP88_RS03055 IPR002293 Amino acid/polyamine transporter I JCP88_RS03060 IPR032688 ABC-2 family transporter protein JCP88_RS03065 IPR003439 ABC transporter-like JCP88_RS03065 IPR003593 AAA+ ATPase domain JCP88_RS03065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03065 IPR017871 ABC transporter, conserved site JCP88_RS03070 IPR000390 Small multidrug resistance protein family JCP88_RS03085 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like JCP88_RS03085 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily JCP88_RS03085 IPR029762 Pyroglutamyl peptidase I, bacterial-type JCP88_RS03085 IPR033693 Pyroglutamyl peptidase I, Glu active site JCP88_RS03085 IPR033694 Pyroglutamyl peptidase I, Cys active site JCP88_RS03085 IPR000816 Peptidase C15, pyroglutamyl peptidase I JCP88_RS03100 IPR037478 YwkD-like domain JCP88_RS03100 IPR037523 Vicinal oxygen chelate (VOC) domain JCP88_RS03100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JCP88_RS03100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JCP88_RS03125 IPR036412 HAD-like superfamily JCP88_RS03125 IPR000150 Cof family JCP88_RS03125 IPR023214 HAD superfamily JCP88_RS03125 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS03130 IPR002043 Uracil-DNA glycosylase family 1 JCP88_RS03130 IPR005122 Uracil-DNA glycosylase-like JCP88_RS03130 IPR018085 Uracil-DNA glycosylase, active site JCP88_RS03130 IPR036895 Uracil-DNA glycosylase-like domain superfamily JCP88_RS03135 IPR004614 Phosphate acetyltransferase JCP88_RS03135 IPR012147 Phosphate acetyl/butyryltransferase JCP88_RS03135 IPR042112 Phosphate acetyltransferase, domain 2 JCP88_RS03135 IPR002505 Phosphate acetyl/butaryl transferase JCP88_RS03135 IPR042113 Phosphate acetyltransferase, domain 1 JCP88_RS03140 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE JCP88_RS03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03145 IPR000182 GNAT domain JCP88_RS03145 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS03150 IPR012337 Ribonuclease H-like superfamily JCP88_RS03150 IPR029460 DNA polymerase, helix-hairpin-helix motif JCP88_RS03150 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JCP88_RS03150 IPR036397 Ribonuclease H superfamily JCP88_RS03150 IPR003141 Polymerase/histidinol phosphatase, N-terminal JCP88_RS03150 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type JCP88_RS03150 IPR024754 DNA polymerase III polC-like, N-terminal domain II JCP88_RS03150 IPR040982 DNA polymerase III alpha subunit finger domain JCP88_RS03150 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JCP88_RS03150 IPR028112 DNA polymerase III polC-type, N-terminal domain I JCP88_RS03150 IPR013520 Exonuclease, RNase T/DNA polymerase III JCP88_RS03150 IPR004013 PHP domain JCP88_RS03150 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS03155 IPR005135 Endonuclease/exonuclease/phosphatase JCP88_RS03155 IPR004808 AP endonuclease 1 JCP88_RS03155 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JCP88_RS03155 IPR020848 AP endonuclease 1, conserved site JCP88_RS03155 IPR020847 AP endonuclease 1, binding site JCP88_RS03160 IPR000683 Oxidoreductase, N-terminal JCP88_RS03160 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03165 IPR036318 FAD-binding, type PCMH-like superfamily JCP88_RS03165 IPR016166 FAD-binding domain, PCMH-type JCP88_RS03165 IPR006094 FAD linked oxidase, N-terminal JCP88_RS03165 IPR016169 FAD-binding, type PCMH, subdomain 2 JCP88_RS03165 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JCP88_RS03165 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JCP88_RS03165 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily JCP88_RS03165 IPR016167 FAD-binding, type PCMH, subdomain 1 JCP88_RS03190 IPR036280 Multiheme cytochrome superfamily JCP88_RS03190 IPR010960 Flavocytochrome c JCP88_RS03190 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS03190 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JCP88_RS03190 IPR011031 Multihaem cytochrome JCP88_RS03190 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JCP88_RS03190 IPR012286 Tetrahaem cytochrome domain JCP88_RS03200 IPR016040 NAD(P)-binding domain JCP88_RS03200 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03205 IPR024529 ECF transporter, substrate-specific component JCP88_RS03210 IPR011847 Phosphopantothenoylcysteine decarboxylase JCP88_RS03210 IPR036551 Flavin prenyltransferase-like JCP88_RS03210 IPR003382 Flavoprotein JCP88_RS03215 IPR003382 Flavoprotein JCP88_RS03215 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal JCP88_RS03215 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC JCP88_RS03215 IPR035929 CoaB-like superfamily JCP88_RS03215 IPR036551 Flavin prenyltransferase-like JCP88_RS03220 IPR013154 Alcohol dehydrogenase, N-terminal JCP88_RS03220 IPR014188 Acrylyl-CoA reductase AcuI JCP88_RS03220 IPR011032 GroES-like superfamily JCP88_RS03220 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03220 IPR020843 Polyketide synthase, enoylreductase domain JCP88_RS03220 IPR013149 Alcohol dehydrogenase, C-terminal JCP88_RS03230 IPR003593 AAA+ ATPase domain JCP88_RS03230 IPR003439 ABC transporter-like JCP88_RS03230 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA JCP88_RS03230 IPR017871 ABC transporter, conserved site JCP88_RS03230 IPR008995 Molybdate/tungstate binding, C-terminal JCP88_RS03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03230 IPR013611 Transport-associated OB, type 2 JCP88_RS03230 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JCP88_RS03235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS03235 IPR035906 MetI-like superfamily JCP88_RS03240 IPR035906 MetI-like superfamily JCP88_RS03240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS03245 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS03245 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JCP88_RS03250 IPR002078 RNA polymerase sigma factor 54 interaction domain JCP88_RS03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03250 IPR003593 AAA+ ATPase domain JCP88_RS03250 IPR025944 Sigma-54 interaction domain, conserved site JCP88_RS03250 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JCP88_RS03250 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JCP88_RS03250 IPR002197 DNA binding HTH domain, Fis-type JCP88_RS03250 IPR009057 Homeobox-like domain superfamily JCP88_RS03260 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS03260 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS03265 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JCP88_RS03270 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS03285 IPR000600 ROK family JCP88_RS03315 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS03315 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS03315 IPR002104 Integrase, catalytic domain JCP88_RS03315 IPR010998 Integrase/recombinase, N-terminal JCP88_RS03315 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS03320 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal JCP88_RS03320 IPR038071 UROD/MetE-like superfamily JCP88_RS03330 IPR009061 Putative DNA-binding domain superfamily JCP88_RS03330 IPR000551 MerR-type HTH domain JCP88_RS03335 IPR008147 Glutamine synthetase, beta-Grasp domain JCP88_RS03335 IPR036651 Glutamine synthetase, N-terminal domain superfamily JCP88_RS03335 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JCP88_RS03335 IPR027303 Glutamine synthetase, glycine-rich site JCP88_RS03335 IPR004809 Glutamine synthetase type I JCP88_RS03335 IPR027302 Glutamine synthetase, N-terminal conserved site JCP88_RS03335 IPR008146 Glutamine synthetase, catalytic domain JCP88_RS03340 IPR004468 CTP synthase JCP88_RS03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03340 IPR029062 Class I glutamine amidotransferase-like JCP88_RS03340 IPR017456 CTP synthase, N-terminal JCP88_RS03340 IPR017926 Glutamine amidotransferase JCP88_RS03340 IPR033828 CTP synthase GATase domain JCP88_RS03345 IPR013785 Aldolase-type TIM barrel JCP88_RS03345 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 JCP88_RS03345 IPR000771 Fructose-bisphosphate aldolase, class-II JCP88_RS03350 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JCP88_RS03350 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JCP88_RS03350 IPR001986 Enolpyruvate transferase domain JCP88_RS03350 IPR036968 Enolpyruvate transferase domain superfamily JCP88_RS03355 IPR004665 Transcription termination factor Rho JCP88_RS03355 IPR011113 Rho termination factor, RNA-binding domain JCP88_RS03355 IPR036269 Rho termination factor, N-terminal domain superfamily JCP88_RS03355 IPR011112 Rho termination factor, N-terminal JCP88_RS03355 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03355 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS03355 IPR011129 Cold shock domain JCP88_RS03355 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JCP88_RS03355 IPR041703 Transcription termination factor Rho, ATP binding domain JCP88_RS03355 IPR003593 AAA+ ATPase domain JCP88_RS03360 IPR002150 Ribosomal protein L31 JCP88_RS03360 IPR027493 Ribosomal protein L31 type B JCP88_RS03360 IPR042105 Ribosomal protein L31 superfamily JCP88_RS03360 IPR034704 L28p-like JCP88_RS03370 IPR036095 PTS system IIB component-like superfamily JCP88_RS03370 IPR003352 Phosphotransferase system, EIIC JCP88_RS03370 IPR006327 Phosphotransferase system, fructose IIC component JCP88_RS03370 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS03370 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS03370 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JCP88_RS03370 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS03375 IPR013785 Aldolase-type TIM barrel JCP88_RS03375 IPR000771 Fructose-bisphosphate aldolase, class-II JCP88_RS03375 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY JCP88_RS03375 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY JCP88_RS03380 IPR001034 DeoR-type HTH domain JCP88_RS03380 IPR014036 DeoR C-terminal sensor domain JCP88_RS03380 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS03380 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS03380 IPR037171 NagB/RpiA transferase-like JCP88_RS03380 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JCP88_RS03390 IPR036259 MFS transporter superfamily JCP88_RS03390 IPR011701 Major facilitator superfamily JCP88_RS03390 IPR020846 Major facilitator superfamily domain JCP88_RS03400 IPR018335 Transcription regulator HTH, Crp-type, conserved site JCP88_RS03400 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS03400 IPR014710 RmlC-like jelly roll fold JCP88_RS03400 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS03400 IPR018490 Cyclic nucleotide-binding-like JCP88_RS03400 IPR012318 Crp-type HTH domain JCP88_RS03420 IPR022754 DNA polymerase III, gamma subunit, domain III JCP88_RS03420 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JCP88_RS03420 IPR012763 DNA polymerase III, subunit gamma/ tau JCP88_RS03420 IPR001270 ClpA/B family JCP88_RS03420 IPR003593 AAA+ ATPase domain JCP88_RS03420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03425 IPR004401 Nucleoid-associated protein YbaB/EbfC family JCP88_RS03425 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JCP88_RS03430 IPR034137 RecR, TOPRIM domain JCP88_RS03430 IPR023628 Recombination protein RecR, C4-type zinc finger JCP88_RS03430 IPR006171 TOPRIM domain JCP88_RS03430 IPR000093 DNA recombination protein RecR JCP88_RS03430 IPR015967 Recombination protein RecR, conserved site JCP88_RS03430 IPR023627 Recombination protein RecR JCP88_RS03435 IPR018094 Thymidylate kinase JCP88_RS03435 IPR018095 Thymidylate kinase, conserved site JCP88_RS03435 IPR039430 Thymidylate kinase-like domain JCP88_RS03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03440 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS03440 IPR011322 Nitrogen regulatory PII-like, alpha/beta JCP88_RS03440 IPR010375 Cyclic-di-AMP receptor JCP88_RS03445 IPR015199 DNA polymerase III, delta subunit, C-terminal JCP88_RS03445 IPR004622 DNA polymerase III, delta prime subunit JCP88_RS03445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03450 IPR007557 PSP1, C-terminal JCP88_RS03455 IPR010377 Initiation control protein YabA JCP88_RS03460 IPR008189 rRNA small subunit methyltransferase I JCP88_RS03460 IPR018063 SAM-dependent methyltransferase RsmI, conserved site JCP88_RS03460 IPR014776 Tetrapyrrole methylase, subdomain 2 JCP88_RS03460 IPR014777 Tetrapyrrole methylase, subdomain 1 JCP88_RS03460 IPR035996 Tetrapyrrole methylase superfamily JCP88_RS03460 IPR000878 Tetrapyrrole methylase JCP88_RS03465 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JCP88_RS03465 IPR017961 DNA polymerase, Y-family, little finger domain JCP88_RS03465 IPR022880 DNA polymerase IV JCP88_RS03465 IPR024728 DNA polymerase type-Y, HhH motif JCP88_RS03465 IPR001126 UmuC domain JCP88_RS03470 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic JCP88_RS03470 IPR013785 Aldolase-type TIM barrel JCP88_RS03470 IPR007197 Radical SAM JCP88_RS03470 IPR001989 Radical-activating enzyme, conserved site JCP88_RS03470 IPR034457 Organic radical-activating enzymes JCP88_RS03475 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JCP88_RS03475 IPR001150 Glycine radical domain JCP88_RS03475 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JCP88_RS03475 IPR005144 ATP-cone domain JCP88_RS03480 IPR003439 ABC transporter-like JCP88_RS03480 IPR003593 AAA+ ATPase domain JCP88_RS03480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03485 IPR027022 ABC transporter permease protein, BceB-type JCP88_RS03485 IPR003838 ABC transporter permease protein domain JCP88_RS03495 IPR020845 AMP-binding, conserved site JCP88_RS03495 IPR025110 AMP-binding enzyme, C-terminal domain JCP88_RS03495 IPR010072 D-alanine--D-alanyl carrier protein ligase JCP88_RS03495 IPR042099 AMP-dependent synthetase-like superfamily JCP88_RS03495 IPR000873 AMP-dependent synthetase/ligase JCP88_RS03495 IPR010071 Amino acid adenylation domain JCP88_RS03500 IPR024024 D-alanyl transfer protein DltB JCP88_RS03500 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB JCP88_RS03500 IPR004299 Membrane bound O-acyl transferase, MBOAT JCP88_RS03505 IPR009081 Phosphopantetheine binding ACP domain JCP88_RS03505 IPR003230 D-alanyl carrier protein JCP88_RS03505 IPR036736 ACP-like superfamily JCP88_RS03510 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes JCP88_RS03510 IPR006998 DltD JCP88_RS03515 IPR023367 Peptidase M42, domain 2 JCP88_RS03515 IPR008007 Peptidase M42 JCP88_RS03525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS03525 IPR001279 Metallo-beta-lactamase JCP88_RS03530 IPR019491 Lipoate protein ligase, C-terminal JCP88_RS03530 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain JCP88_RS03530 IPR004562 Lipoyltransferase/lipoate-protein ligase JCP88_RS03540 IPR001207 Transposase, mutator type JCP88_RS03560 IPR009732 Protein of unknown function DUF1304 JCP88_RS03565 IPR011547 SLC26A/SulP transporter domain JCP88_RS03565 IPR001902 SLC26A/SulP transporter JCP88_RS03565 IPR002645 STAS domain JCP88_RS03565 IPR036513 STAS domain superfamily JCP88_RS03575 IPR028909 Ribosomal protein L21-like JCP88_RS03575 IPR001787 Ribosomal protein L21 JCP88_RS03575 IPR036164 L21-like superfamily JCP88_RS03585 IPR018261 Ribosomal protein L27, conserved site JCP88_RS03585 IPR001684 Ribosomal protein L27 JCP88_RS03590 IPR001584 Integrase, catalytic core JCP88_RS03590 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS03590 IPR012337 Ribonuclease H-like superfamily JCP88_RS03595 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03595 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS03595 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JCP88_RS03595 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS03595 IPR001550 Transcription antiterminator, conserved site JCP88_RS03595 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS03595 IPR002078 RNA polymerase sigma factor 54 interaction domain JCP88_RS03595 IPR003593 AAA+ ATPase domain JCP88_RS03595 IPR011608 PRD domain JCP88_RS03595 IPR036634 PRD domain superfamily JCP88_RS03600 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS03600 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS03600 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS03600 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup JCP88_RS03600 IPR013789 Phosphotransferase system, mannose family IIA component JCP88_RS03600 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS03600 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS03605 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS03605 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS03605 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS03605 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS03605 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS03610 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JCP88_RS03615 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS03625 IPR007341 Transglycosylase-associated protein JCP88_RS03630 IPR000994 Peptidase M24 JCP88_RS03630 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JCP88_RS03630 IPR000587 Creatinase, N-terminal JCP88_RS03630 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JCP88_RS03630 IPR036005 Creatinase/aminopeptidase-like JCP88_RS03630 IPR001714 Peptidase M24, methionine aminopeptidase JCP88_RS03635 IPR005531 Alkaline shock protein Asp23 JCP88_RS03640 IPR035926 NusB-like superfamily JCP88_RS03640 IPR006027 NusB/RsmB/TIM44 JCP88_RS03640 IPR011605 NusB antitermination factor JCP88_RS03645 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03645 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase JCP88_RS03645 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCP88_RS03645 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site JCP88_RS03645 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCP88_RS03650 IPR020579 Exonuclease VII, large subunit, C-terminal JCP88_RS03650 IPR025824 OB-fold nucleic acid binding domain JCP88_RS03650 IPR003753 Exonuclease VII, large subunit JCP88_RS03655 IPR003761 Exonuclease VII, small subunit JCP88_RS03655 IPR037004 Exonuclease VII, small subunit superfamily JCP88_RS03660 IPR008949 Isoprenoid synthase domain superfamily JCP88_RS03660 IPR000092 Polyprenyl synthetase JCP88_RS03660 IPR033749 Polyprenyl synthetase, conserved site JCP88_RS03665 IPR004538 Haemolysin A /rRNA methyltransferase TlyA JCP88_RS03665 IPR002942 RNA-binding S4 domain JCP88_RS03665 IPR036986 RNA-binding S4 domain superfamily JCP88_RS03665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS03665 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JCP88_RS03670 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS03670 IPR001669 Arginine repressor JCP88_RS03670 IPR020899 Arginine repressor, C-terminal JCP88_RS03670 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS03670 IPR020900 Arginine repressor, DNA-binding domain JCP88_RS03670 IPR036251 Arginine repressor, C-terminal domain superfamily JCP88_RS03675 IPR004604 DNA recombination/repair protein RecN JCP88_RS03675 IPR038729 Rad50/SbcC-type AAA domain JCP88_RS03675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03695 IPR007159 SpoVT-AbrB domain JCP88_RS03695 IPR037914 SpoVT-AbrB domain superfamily JCP88_RS03695 IPR038619 MraZ superfamily JCP88_RS03695 IPR003444 Transcriptional regulator MraZ JCP88_RS03695 IPR035644 MraZ, C-terminal JCP88_RS03695 IPR020603 MraZ domain JCP88_RS03695 IPR035642 MraZ, N-terminal JCP88_RS03700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS03700 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily JCP88_RS03700 IPR002903 Ribosomal RNA small subunit methyltransferase H JCP88_RS03710 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS03710 IPR005543 PASTA domain JCP88_RS03710 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS03710 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JCP88_RS03710 IPR005311 Penicillin-binding protein, dimerisation domain JCP88_RS03715 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase JCP88_RS03715 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JCP88_RS03715 IPR000715 Glycosyl transferase, family 4 JCP88_RS03720 IPR013221 Mur ligase, central JCP88_RS03720 IPR036615 Mur ligase, C-terminal domain superfamily JCP88_RS03720 IPR004101 Mur ligase, C-terminal JCP88_RS03720 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS03720 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JCP88_RS03725 IPR007235 Glycosyl transferase, family 28, C-terminal JCP88_RS03725 IPR004276 Glycosyltransferase family 28, N-terminal domain JCP88_RS03725 IPR006009 N-acetylglucosaminyltransferase, MurG JCP88_RS03730 IPR013685 POTRA domain, FtsQ-type JCP88_RS03730 IPR005548 Cell division protein FtsQ/DivIB JCP88_RS03730 IPR026580 Cell division protein DivIB JCP88_RS03730 IPR034746 POTRA domain JCP88_RS03735 IPR021873 Cell division protein FtsA, C-terminal JCP88_RS03735 IPR003494 SHS2 domain inserted in FtsA JCP88_RS03735 IPR020823 Cell division protein FtsA JCP88_RS03740 IPR008280 Tubulin/FtsZ, C-terminal JCP88_RS03740 IPR020805 Cell division protein FtsZ, conserved site JCP88_RS03740 IPR024757 Cell division protein FtsZ, C-terminal JCP88_RS03740 IPR000158 Cell division protein FtsZ JCP88_RS03740 IPR003008 Tubulin/FtsZ, GTPase domain JCP88_RS03740 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JCP88_RS03740 IPR036525 Tubulin/FtsZ, GTPase domain superfamily JCP88_RS03740 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily JCP88_RS03745 IPR011078 Pyridoxal phosphate homeostasis protein JCP88_RS03745 IPR001608 Alanine racemase, N-terminal JCP88_RS03745 IPR029066 PLP-binding barrel JCP88_RS03750 IPR038594 SepF-like superfamily JCP88_RS03750 IPR007561 Cell division protein SepF/SepF-related JCP88_RS03750 IPR023052 Cell division protein SepF JCP88_RS03760 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JCP88_RS03760 IPR002942 RNA-binding S4 domain JCP88_RS03760 IPR036986 RNA-binding S4 domain superfamily JCP88_RS03760 IPR040591 YlmH, putative RNA-binding domain JCP88_RS03765 IPR007793 DivIVA family JCP88_RS03765 IPR019933 DivIVA domain JCP88_RS03770 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JCP88_RS03770 IPR010663 Zinc finger, FPG/IleRS-type JCP88_RS03770 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS03770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS03770 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain JCP88_RS03770 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS03770 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JCP88_RS03770 IPR002301 Isoleucine-tRNA ligase JCP88_RS03770 IPR002300 Aminoacyl-tRNA synthetase, class Ia JCP88_RS03770 IPR023585 Isoleucine-tRNA ligase, type 1 JCP88_RS03775 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03775 IPR001282 Glucose-6-phosphate dehydrogenase JCP88_RS03775 IPR019796 Glucose-6-phosphate dehydrogenase, active site JCP88_RS03775 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding JCP88_RS03775 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal JCP88_RS03790 IPR005224 Sugar fermentation stimulation protein JCP88_RS03790 IPR040452 Sugar fermentation stimulation protein, C-terminal JCP88_RS03790 IPR041465 SfsA, N-terminal OB domain JCP88_RS03795 IPR036291 NAD(P)-binding domain superfamily JCP88_RS03795 IPR000683 Oxidoreductase, N-terminal JCP88_RS03800 IPR001650 Helicase, C-terminal JCP88_RS03800 IPR011545 DEAD/DEAH box helicase domain JCP88_RS03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03800 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS03805 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS03805 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS03805 IPR003593 AAA+ ATPase domain JCP88_RS03805 IPR011608 PRD domain JCP88_RS03805 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS03805 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS03805 IPR036634 PRD domain superfamily JCP88_RS03805 IPR002078 RNA polymerase sigma factor 54 interaction domain JCP88_RS03805 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS03805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JCP88_RS03805 IPR001550 Transcription antiterminator, conserved site JCP88_RS03810 IPR036095 PTS system IIB component-like superfamily JCP88_RS03810 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS03810 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS03815 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JCP88_RS03815 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JCP88_RS03820 IPR003352 Phosphotransferase system, EIIC JCP88_RS03820 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS03880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS03880 IPR001387 Cro/C1-type helix-turn-helix domain JCP88_RS04145 IPR001207 Transposase, mutator type JCP88_RS04180 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS04180 IPR002059 Cold-shock protein, DNA-binding JCP88_RS04180 IPR019844 Cold-shock (CSD) domain JCP88_RS04180 IPR011129 Cold shock domain JCP88_RS04180 IPR012156 Cold shock, CspA JCP88_RS04190 IPR042173 Ribonuclease J, domain 2 JCP88_RS04190 IPR004613 Ribonuclease J JCP88_RS04190 IPR001587 Ribonuclease J, conserved site JCP88_RS04190 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JCP88_RS04190 IPR030854 Ribonuclease J, bacteria JCP88_RS04190 IPR001279 Metallo-beta-lactamase JCP88_RS04190 IPR041636 Ribonuclease J, C-terminal JCP88_RS04190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS04195 IPR009907 Protein of unknown function DUF1447 JCP88_RS04200 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04200 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04200 IPR003439 ABC transporter-like JCP88_RS04200 IPR017871 ABC transporter, conserved site JCP88_RS04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04200 IPR039421 Type I protein exporter JCP88_RS04200 IPR003593 AAA+ ATPase domain JCP88_RS04205 IPR003593 AAA+ ATPase domain JCP88_RS04205 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04205 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04205 IPR003439 ABC transporter-like JCP88_RS04205 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04205 IPR039421 Type I protein exporter JCP88_RS04215 IPR001451 Hexapeptide repeat JCP88_RS04215 IPR011004 Trimeric LpxA-like superfamily JCP88_RS04220 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JCP88_RS04220 IPR033135 ClpP, histidine active site JCP88_RS04220 IPR018215 ClpP, Ser active site JCP88_RS04220 IPR029045 ClpP/crotonase-like domain superfamily JCP88_RS04220 IPR001907 ATP-dependent Clp protease proteolytic subunit JCP88_RS04230 IPR030395 Glycerophosphodiester phosphodiesterase domain JCP88_RS04230 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily JCP88_RS04235 IPR039657 Dimethylallyltransferase JCP88_RS04235 IPR018022 IPP transferase JCP88_RS04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04240 IPR032305 GTP-binding protein, middle domain JCP88_RS04240 IPR006073 GTP binding domain JCP88_RS04240 IPR016496 GTPase HflX JCP88_RS04240 IPR025121 GTPase HflX, N-terminal JCP88_RS04240 IPR042108 GTPase HflX, N-terminal domain superfamily JCP88_RS04240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04240 IPR030394 HflX-type guanine nucleotide-binding (G) domain JCP88_RS04260 IPR003797 DegV JCP88_RS04265 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS04265 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS04265 IPR011006 CheY-like superfamily JCP88_RS04265 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS04265 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS04265 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS04270 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS04270 IPR000700 PAS-associated, C-terminal JCP88_RS04270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS04270 IPR000014 PAS domain JCP88_RS04270 IPR035965 PAS domain superfamily JCP88_RS04270 IPR001610 PAC motif JCP88_RS04270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS04270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS04270 IPR005467 Histidine kinase domain JCP88_RS04270 IPR003660 HAMP domain JCP88_RS04270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS04285 IPR001279 Metallo-beta-lactamase JCP88_RS04285 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS04290 IPR036291 NAD(P)-binding domain superfamily JCP88_RS04290 IPR016040 NAD(P)-binding domain JCP88_RS04295 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS04295 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS04295 IPR003352 Phosphotransferase system, EIIC JCP88_RS04305 IPR020818 GroES chaperonin family JCP88_RS04305 IPR037124 GroES chaperonin superfamily JCP88_RS04305 IPR018369 Chaperonin GroES, conserved site JCP88_RS04305 IPR011032 GroES-like superfamily JCP88_RS04310 IPR002423 Chaperonin Cpn60/TCP-1 family JCP88_RS04310 IPR027409 GroEL-like apical domain superfamily JCP88_RS04310 IPR027413 GroEL-like equatorial domain superfamily JCP88_RS04310 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JCP88_RS04310 IPR018370 Chaperonin Cpn60, conserved site JCP88_RS04310 IPR001844 Chaperonin Cpn60 JCP88_RS04340 IPR028082 Periplasmic binding protein-like I JCP88_RS04340 IPR000843 LacI-type HTH domain JCP88_RS04340 IPR001761 Periplasmic binding protein/LacI sugar binding domain JCP88_RS04340 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS04345 IPR012925 TipAS antibiotic-recognition domain JCP88_RS04345 IPR000551 MerR-type HTH domain JCP88_RS04345 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain JCP88_RS04345 IPR009061 Putative DNA-binding domain superfamily JCP88_RS04355 IPR013785 Aldolase-type TIM barrel JCP88_RS04355 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase JCP88_RS04355 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal JCP88_RS04355 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain JCP88_RS04355 IPR007229 Nicotinate phosphoribosyltransferase family JCP88_RS04355 IPR006405 Nicotinate phosphoribosyltransferase pncB-type JCP88_RS04355 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain JCP88_RS04360 IPR022926 NH(3)-dependent NAD(+) synthetase JCP88_RS04360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS04360 IPR003694 NAD(+) synthetase JCP88_RS04360 IPR022310 NAD/GMP synthase JCP88_RS04370 IPR017853 Glycoside hydrolase superfamily JCP88_RS04370 IPR010720 Alpha-L-arabinofuranosidase, C-terminal JCP88_RS04370 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS04380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS04380 IPR035906 MetI-like superfamily JCP88_RS04385 IPR035906 MetI-like superfamily JCP88_RS04385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS04395 IPR010720 Alpha-L-arabinofuranosidase, C-terminal JCP88_RS04395 IPR017853 Glycoside hydrolase superfamily JCP88_RS04395 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS04400 IPR006710 Glycoside hydrolase, family 43 JCP88_RS04400 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JCP88_RS04400 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily JCP88_RS04400 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain JCP88_RS04405 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS04405 IPR000524 Transcription regulator HTH, GntR JCP88_RS04405 IPR028082 Periplasmic binding protein-like I JCP88_RS04405 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain JCP88_RS04405 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS04410 IPR005829 Sugar transporter, conserved site JCP88_RS04410 IPR003663 Sugar/inositol transporter JCP88_RS04410 IPR036259 MFS transporter superfamily JCP88_RS04410 IPR005828 Major facilitator, sugar transporter-like JCP88_RS04410 IPR020846 Major facilitator superfamily domain JCP88_RS04420 IPR001303 Class II aldolase/adducin N-terminal JCP88_RS04420 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JCP88_RS04420 IPR004661 L-ribulose-5-phosphate 4-epimerase JCP88_RS04425 IPR024664 L-arabinose isomerase, C-terminal JCP88_RS04425 IPR038583 L-arabinose isomerase, N-terminal domain superfamily JCP88_RS04425 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily JCP88_RS04425 IPR004216 L-fucose/L-arabinose isomerase, C-terminal JCP88_RS04425 IPR003762 L-arabinose isomerase JCP88_RS04435 IPR000917 Sulfatase, N-terminal JCP88_RS04435 IPR017850 Alkaline-phosphatase-like, core domain superfamily JCP88_RS04450 IPR019405 Lactonase, 7-bladed beta propeller JCP88_RS04450 IPR015943 WD40/YVTN repeat-like-containing domain superfamily JCP88_RS04450 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily JCP88_RS04460 IPR002549 Transmembrane protein TqsA-like JCP88_RS04470 IPR003680 Flavodoxin-like fold JCP88_RS04470 IPR029039 Flavoprotein-like superfamily JCP88_RS04470 IPR023048 NADH-azoreductase, FMN-dependent JCP88_RS04485 IPR003439 ABC transporter-like JCP88_RS04485 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04485 IPR017871 ABC transporter, conserved site JCP88_RS04485 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04485 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04485 IPR039421 Type I protein exporter JCP88_RS04485 IPR003593 AAA+ ATPase domain JCP88_RS04490 IPR039421 Type I protein exporter JCP88_RS04490 IPR003593 AAA+ ATPase domain JCP88_RS04490 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04490 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04490 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04490 IPR003439 ABC transporter-like JCP88_RS04500 IPR022849 Peptidase S12, YfeW/YbbE-like JCP88_RS04500 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS04500 IPR001466 Beta-lactamase-related JCP88_RS04505 IPR014710 RmlC-like jelly roll fold JCP88_RS04505 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form JCP88_RS04505 IPR001250 Mannose-6-phosphate isomerase, type I JCP88_RS04505 IPR011051 RmlC-like cupin domain superfamily JCP88_RS04510 IPR003352 Phosphotransferase system, EIIC JCP88_RS04510 IPR029503 Phosphotransferase system EIIB component, mannitol-specific JCP88_RS04510 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS04510 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS04510 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS04510 IPR036095 PTS system IIB component-like superfamily JCP88_RS04510 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC JCP88_RS04515 IPR007737 Mga helix-turn-helix domain JCP88_RS04515 IPR016152 Phosphotransferase/anion transporter JCP88_RS04515 IPR011608 PRD domain JCP88_RS04515 IPR013196 Helix-turn-helix, type 11 JCP88_RS04515 IPR002178 PTS EIIA type-2 domain JCP88_RS04515 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS04520 IPR002178 PTS EIIA type-2 domain JCP88_RS04520 IPR016152 Phosphotransferase/anion transporter JCP88_RS04530 IPR003593 AAA+ ATPase domain JCP88_RS04530 IPR017871 ABC transporter, conserved site JCP88_RS04530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04530 IPR003439 ABC transporter-like JCP88_RS04535 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS04535 IPR036095 PTS system IIB component-like superfamily JCP88_RS04535 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS04535 IPR003352 Phosphotransferase system, EIIC JCP88_RS04535 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS04535 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC JCP88_RS04535 IPR029503 Phosphotransferase system EIIB component, mannitol-specific JCP88_RS04540 IPR016152 Phosphotransferase/anion transporter JCP88_RS04540 IPR002178 PTS EIIA type-2 domain JCP88_RS04545 IPR036291 NAD(P)-binding domain superfamily JCP88_RS04545 IPR013131 Mannitol dehydrogenase, N-terminal JCP88_RS04545 IPR023027 Mannitol dehydrogenase, conserved site JCP88_RS04545 IPR013118 Mannitol dehydrogenase, C-terminal JCP88_RS04545 IPR000669 Mannitol dehydrogenase JCP88_RS04545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS04545 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS04545 IPR023028 Mannitol-1-phosphate 5-dehydrogenase JCP88_RS04550 IPR011698 CobB/CobQ-like glutamine amidotransferase JCP88_RS04550 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 JCP88_RS04550 IPR017929 CobB/CobQ glutamine amidotransferase JCP88_RS04550 IPR029062 Class I glutamine amidotransferase-like JCP88_RS04555 IPR013564 Domain of unknown function DUF1727 JCP88_RS04555 IPR013221 Mur ligase, central JCP88_RS04555 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS04560 IPR003445 Cation transporter JCP88_RS04565 IPR003828 Epoxyqueuosine reductase QueH JCP88_RS04580 IPR036286 LexA/Signal peptidase-like superfamily JCP88_RS04580 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JCP88_RS04580 IPR019756 Peptidase S26A, signal peptidase I, serine active site JCP88_RS04580 IPR019533 Peptidase S26 JCP88_RS04580 IPR000223 Peptidase S26A, signal peptidase I JCP88_RS04585 IPR023576 UbiE/COQ5 methyltransferase, conserved site JCP88_RS04585 IPR004033 UbiE/COQ5 methyltransferase JCP88_RS04585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS04595 IPR001267 Thymidine kinase JCP88_RS04595 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04595 IPR020633 Thymidine kinase, conserved site JCP88_RS04600 IPR004373 Peptide chain release factor 1 JCP88_RS04600 IPR005139 Peptide chain release factor JCP88_RS04600 IPR000352 Peptide chain release factor class I JCP88_RS04605 IPR040758 Release factor glutamine methyltransferase, N-terminal domain JCP88_RS04605 IPR004556 Methyltransferase HemK-like JCP88_RS04605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JCP88_RS04605 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JCP88_RS04605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS04605 IPR007848 Methyltransferase small domain JCP88_RS04615 IPR005145 Putative GTP-binding controlling metal-binding domain JCP88_RS04615 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily JCP88_RS04615 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 JCP88_RS04615 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JCP88_RS04615 IPR006070 YrdC-like domain JCP88_RS04620 IPR039429 Serine hydroxymethyltransferase-like domain JCP88_RS04620 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site JCP88_RS04620 IPR001085 Serine hydroxymethyltransferase JCP88_RS04620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS04620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS04620 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS04625 IPR023508 Acetyl esterase JCP88_RS04625 IPR033140 Lipase, GDXG, putative serine active site JCP88_RS04625 IPR029058 Alpha/Beta hydrolase fold JCP88_RS04625 IPR013094 Alpha/beta hydrolase fold-3 JCP88_RS04630 IPR000836 Phosphoribosyltransferase domain JCP88_RS04630 IPR034332 Uracil phosphoribosyltransferase, bacterial-type JCP88_RS04630 IPR005765 Uracil phosphoribosyl transferase JCP88_RS04630 IPR029057 Phosphoribosyltransferase-like JCP88_RS04665 IPR001207 Transposase, mutator type JCP88_RS04670 IPR011252 Fibrogen-binding domain 1 JCP88_RS04670 IPR041033 Prealbumin-like fold domain JCP88_RS04670 IPR019931 LPXTG cell wall anchor domain JCP88_RS04670 IPR013783 Immunoglobulin-like fold JCP88_RS04670 IPR008456 Collagen binding domain JCP88_RS04670 IPR008454 Collagen-binding surface protein Cna-like, B-type domain JCP88_RS04670 IPR008966 Adhesion domain superfamily JCP88_RS04680 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS04680 IPR035906 MetI-like superfamily JCP88_RS04680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS04685 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JCP88_RS04685 IPR003593 AAA+ ATPase domain JCP88_RS04685 IPR017871 ABC transporter, conserved site JCP88_RS04685 IPR003439 ABC transporter-like JCP88_RS04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04690 IPR001320 Ionotropic glutamate receptor JCP88_RS04690 IPR018313 Solute-binding protein family 3, conserved site JCP88_RS04690 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter JCP88_RS04690 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JCP88_RS04695 IPR017853 Glycoside hydrolase superfamily JCP88_RS04695 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS04695 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS04695 IPR001360 Glycoside hydrolase family 1 JCP88_RS04700 IPR003593 AAA+ ATPase domain JCP88_RS04700 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS04700 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS04700 IPR041027 FtsK alpha domain JCP88_RS04700 IPR018541 FtsK gamma domain JCP88_RS04700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04700 IPR002543 FtsK domain JCP88_RS04705 IPR013785 Aldolase-type TIM barrel JCP88_RS04705 IPR027492 Dual-specificity RNA methyltransferase RlmN JCP88_RS04705 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr JCP88_RS04705 IPR040072 Methyltransferase (Class A) JCP88_RS04705 IPR007197 Radical SAM JCP88_RS04715 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS04715 IPR000182 GNAT domain JCP88_RS04720 IPR000914 Solute-binding protein family 5 domain JCP88_RS04720 IPR039424 Solute-binding protein family 5 JCP88_RS04720 IPR023765 Solute-binding protein family 5, conserved site JCP88_RS04720 IPR030678 Peptide/nickel binding protein, MppA-type JCP88_RS04730 IPR035906 MetI-like superfamily JCP88_RS04730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS04735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS04735 IPR035906 MetI-like superfamily JCP88_RS04735 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JCP88_RS04740 IPR017871 ABC transporter, conserved site JCP88_RS04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04740 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JCP88_RS04740 IPR003593 AAA+ ATPase domain JCP88_RS04740 IPR003439 ABC transporter-like JCP88_RS04745 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JCP88_RS04745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04745 IPR003593 AAA+ ATPase domain JCP88_RS04745 IPR017871 ABC transporter, conserved site JCP88_RS04745 IPR003439 ABC transporter-like JCP88_RS04750 IPR010095 Transposase IS605, OrfB, C-terminal JCP88_RS04750 IPR001959 Probable transposase, IS891/IS1136/IS1341 JCP88_RS04750 IPR021027 Transposase, putative, helix-turn-helix domain JCP88_RS04765 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS04765 IPR002547 tRNA-binding domain JCP88_RS04765 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS04765 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain JCP88_RS04765 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS04765 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS04765 IPR014758 Methionyl-tRNA synthetase JCP88_RS04765 IPR023457 Methionine-tRNA synthetase, type 2 JCP88_RS04765 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JCP88_RS04765 IPR015413 Methionyl/Leucyl tRNA synthetase JCP88_RS04765 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal JCP88_RS04765 IPR033911 Methioninyl-tRNA synthetase core domain JCP88_RS04775 IPR002293 Amino acid/polyamine transporter I JCP88_RS04780 IPR001130 TatD family JCP88_RS04780 IPR032466 Metal-dependent hydrolase JCP88_RS04780 IPR018228 Deoxyribonuclease, TatD-related, conserved site JCP88_RS04780 IPR015991 Uncharacterised hydrolase TatD-type JCP88_RS04785 IPR034141 Ribonuclease M5-like, TOPRIM domain JCP88_RS04785 IPR025156 Ribonuclease M5, C-terminal domain JCP88_RS04785 IPR004466 Ribonuclease M5 JCP88_RS04785 IPR006171 TOPRIM domain JCP88_RS04790 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JCP88_RS04790 IPR023165 rRNA adenine dimethylase-like JCP88_RS04790 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JCP88_RS04790 IPR011530 Ribosomal RNA adenine dimethylase JCP88_RS04790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS04790 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JCP88_RS04800 IPR003593 AAA+ ATPase domain JCP88_RS04800 IPR003439 ABC transporter-like JCP88_RS04800 IPR017871 ABC transporter, conserved site JCP88_RS04800 IPR005116 Transport-associated OB, type 1 JCP88_RS04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04800 IPR040582 MalK, OB fold domain JCP88_RS04800 IPR008995 Molybdate/tungstate binding, C-terminal JCP88_RS04805 IPR036914 Methylglyoxal synthase-like domain superfamily JCP88_RS04805 IPR004363 Methylglyoxal synthase JCP88_RS04805 IPR018148 Methylglyoxal synthase, active site JCP88_RS04805 IPR011607 Methylglyoxal synthase-like domain JCP88_RS04815 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04815 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04815 IPR003439 ABC transporter-like JCP88_RS04815 IPR003593 AAA+ ATPase domain JCP88_RS04815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04815 IPR039421 Type I protein exporter JCP88_RS04820 IPR017871 ABC transporter, conserved site JCP88_RS04820 IPR003439 ABC transporter-like JCP88_RS04820 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS04820 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS04820 IPR003593 AAA+ ATPase domain JCP88_RS04820 IPR039421 Type I protein exporter JCP88_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04830 IPR003593 AAA+ ATPase domain JCP88_RS04830 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04830 IPR011608 PRD domain JCP88_RS04830 IPR036634 PRD domain superfamily JCP88_RS04830 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS04830 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS04830 IPR002078 RNA polymerase sigma factor 54 interaction domain JCP88_RS04840 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS04840 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS04845 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JCP88_RS04850 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS04855 IPR035466 GlmS/AgaS, SIS domain 1 JCP88_RS04855 IPR017932 Glutamine amidotransferase type 2 domain JCP88_RS04855 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising JCP88_RS04855 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS04855 IPR001347 Sugar isomerase (SIS) JCP88_RS04855 IPR035490 GlmS/FrlB, SIS domain 2 JCP88_RS04860 IPR035461 GmhA/DiaA JCP88_RS04860 IPR004515 Phosphoheptose isomerase JCP88_RS04860 IPR001347 Sugar isomerase (SIS) JCP88_RS04865 IPR012337 Ribonuclease H-like superfamily JCP88_RS04865 IPR001584 Integrase, catalytic core JCP88_RS04865 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS04870 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JCP88_RS04870 IPR036291 NAD(P)-binding domain superfamily JCP88_RS04870 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS04870 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JCP88_RS04870 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JCP88_RS04870 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS04875 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JCP88_RS04875 IPR005835 Nucleotidyl transferase domain JCP88_RS04875 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS04885 IPR001347 Sugar isomerase (SIS) JCP88_RS04885 IPR022951 Uncharacterised protein family UPF0309 JCP88_RS04885 IPR035472 RpiR-like, SIS domain JCP88_RS04890 IPR018385 C4-dicarboxylate anaerobic carrier-like JCP88_RS04895 IPR006680 Amidohydrolase-related JCP88_RS04895 IPR033826 Isoaspartyl-dipeptidase JCP88_RS04895 IPR010229 Peptidase M38, beta-aspartyl dipeptidase JCP88_RS04895 IPR032466 Metal-dependent hydrolase JCP88_RS04895 IPR011059 Metal-dependent hydrolase, composite domain superfamily JCP88_RS04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS04905 IPR003439 ABC transporter-like JCP88_RS04905 IPR003593 AAA+ ATPase domain JCP88_RS04910 IPR003838 ABC transporter permease protein domain JCP88_RS04910 IPR025857 MacB-like periplasmic core domain JCP88_RS04915 IPR001279 Metallo-beta-lactamase JCP88_RS04915 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JCP88_RS04915 IPR004613 Ribonuclease J JCP88_RS04915 IPR042173 Ribonuclease J, domain 2 JCP88_RS04915 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS04915 IPR041636 Ribonuclease J, C-terminal JCP88_RS04915 IPR030854 Ribonuclease J, bacteria JCP88_RS04930 IPR001279 Metallo-beta-lactamase JCP88_RS04930 IPR022877 Protein of unknown funcion UPF0173 JCP88_RS04930 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS04935 IPR000644 CBS domain JCP88_RS04935 IPR010766 DRTGG JCP88_RS04935 IPR029069 HotDog domain superfamily JCP88_RS04935 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JCP88_RS04935 IPR006683 Thioesterase domain JCP88_RS04935 IPR000524 Transcription regulator HTH, GntR JCP88_RS04935 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS04935 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS04940 IPR003156 DHHA1 domain JCP88_RS04940 IPR038763 DHH phosphoesterase superfamily JCP88_RS04940 IPR001667 DDH domain JCP88_RS04945 IPR013987 PhnA protein, N-terminal JCP88_RS04945 IPR013988 PhnA protein, C-terminal JCP88_RS04945 IPR004624 PhnA protein JCP88_RS04950 IPR007395 Putative neutral zinc metallopeptidase JCP88_RS04965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS04965 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain JCP88_RS04965 IPR023267 RNA (C5-cytosine) methyltransferase JCP88_RS04965 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JCP88_RS04965 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal JCP88_RS04975 IPR042070 PucR C-terminal helix-turn-helix domain superfamily JCP88_RS04975 IPR025736 PucR C-terminal helix-turn-helix domain JCP88_RS04980 IPR002125 Cytidine and deoxycytidylate deaminase domain JCP88_RS04980 IPR016192 APOBEC/CMP deaminase, zinc-binding JCP88_RS04980 IPR028883 tRNA-specific adenosine deaminase JCP88_RS04980 IPR016193 Cytidine deaminase-like JCP88_RS04990 IPR011240 Phosphoesterase-related protein YunD JCP88_RS04990 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JCP88_RS04990 IPR006179 5'-Nucleotidase/apyrase JCP88_RS04990 IPR008334 5'-Nucleotidase, C-terminal JCP88_RS04990 IPR029052 Metallo-dependent phosphatase-like JCP88_RS04995 IPR009370 Protein of unknown function DUF1027 JCP88_RS04995 IPR038141 YutD-like superfamily JCP88_RS05000 IPR023214 HAD superfamily JCP88_RS05000 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 JCP88_RS05000 IPR006357 HAD-superfamily hydrolase, subfamily IIA JCP88_RS05000 IPR036412 HAD-like superfamily JCP88_RS05010 IPR007686 YutG/PgpA domain JCP88_RS05010 IPR026038 Putative phosphatidylglycerophosphatase JCP88_RS05010 IPR036681 PgpA-like superfamily JCP88_RS05015 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS05015 IPR023753 FAD/NAD(P)-binding domain JCP88_RS05015 IPR022890 Ferredoxin--NADP reductase, type 2 JCP88_RS05025 IPR029000 Cyclophilin-like domain superfamily JCP88_RS05025 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JCP88_RS05025 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JCP88_RS05030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS05030 IPR027619 Putative C-S lyase JCP88_RS05030 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS05030 IPR004839 Aminotransferase, class I/classII JCP88_RS05030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS05035 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS05035 IPR003029 S1 domain JCP88_RS05035 IPR022967 RNA-binding domain, S1 JCP88_RS05065 IPR024463 Transposase TnpC, homeodomain JCP88_RS05065 IPR004291 Transposase, IS66 JCP88_RS05065 IPR039552 Transposase IS66, C-terminal JCP88_RS05065 IPR024474 Zinc-finger binding domain of transposase IS66 JCP88_RS05115 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS05115 IPR000169 Cysteine peptidase, cysteine active site JCP88_RS05115 IPR004134 Peptidase C1B, bleomycin hydrolase JCP88_RS05115 IPR025660 Cysteine peptidase, histidine active site JCP88_RS05120 IPR011009 Protein kinase-like domain superfamily JCP88_RS05120 IPR016477 Fructosamine/Ketosamine-3-kinase JCP88_RS05130 IPR037152 L-asparaginase, N-terminal domain superfamily JCP88_RS05130 IPR006034 Asparaginase/glutaminase-like JCP88_RS05130 IPR036152 Asparaginase/glutaminase-like superfamily JCP88_RS05130 IPR004550 L-asparaginase, type II JCP88_RS05130 IPR040919 Asparaginase/glutaminase, C-terminal JCP88_RS05130 IPR027475 Asparaginase/glutaminase, active site 2 JCP88_RS05130 IPR020827 Asparaginase/glutaminase, active site 1 JCP88_RS05130 IPR027473 L-asparaginase, C-terminal JCP88_RS05130 IPR027474 L-asparaginase, N-terminal JCP88_RS05135 IPR036520 UPF0759 superfamily JCP88_RS05135 IPR002763 Protein of unknown function DUF72 JCP88_RS05140 IPR023214 HAD superfamily JCP88_RS05140 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS05140 IPR036412 HAD-like superfamily JCP88_RS05150 IPR010379 Septation ring formation regulator EzrA JCP88_RS05155 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS05155 IPR000192 Aminotransferase class V domain JCP88_RS05155 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JCP88_RS05155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS05155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS05155 IPR016454 Cysteine desulfurase JCP88_RS05160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS05160 IPR020536 Thil, AANH domain JCP88_RS05160 IPR004114 THUMP domain JCP88_RS05160 IPR003720 tRNA sulfurtransferase ThiI JCP88_RS05165 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS05165 IPR003781 CoA-binding JCP88_RS05165 IPR036291 NAD(P)-binding domain superfamily JCP88_RS05165 IPR009718 Rex DNA-binding, C-terminal domain JCP88_RS05165 IPR022876 Redox-sensing transcriptional repressor Rex JCP88_RS05165 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS05170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS05170 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JCP88_RS05170 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS05170 IPR033705 Valyl tRNA synthetase, anticodon-binding domain JCP88_RS05170 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JCP88_RS05170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS05170 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JCP88_RS05170 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm JCP88_RS05170 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JCP88_RS05170 IPR002303 Valine-tRNA ligase JCP88_RS05170 IPR002300 Aminoacyl-tRNA synthetase, class Ia JCP88_RS05175 IPR001645 Folylpolyglutamate synthetase JCP88_RS05175 IPR018109 Folylpolyglutamate synthetase, conserved site JCP88_RS05175 IPR036615 Mur ligase, C-terminal domain superfamily JCP88_RS05175 IPR013221 Mur ligase, central JCP88_RS05175 IPR004101 Mur ligase, C-terminal JCP88_RS05175 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS05180 IPR036412 HAD-like superfamily JCP88_RS05180 IPR006439 HAD hydrolase, subfamily IA JCP88_RS05180 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS05180 IPR023214 HAD superfamily JCP88_RS05180 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS05185 IPR037518 MPN domain JCP88_RS05185 IPR025657 RadC-like JAB domain JCP88_RS05185 IPR010994 RuvA domain 2-like JCP88_RS05185 IPR001405 Uncharacterised protein family UPF0758 JCP88_RS05185 IPR020891 Uncharacterised protein family UPF0758, conserved site JCP88_RS05190 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS05190 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS05190 IPR038109 DNA-binding recombinase domain superfamily JCP88_RS05190 IPR011109 DNA-binding recombinase domain JCP88_RS05190 IPR006118 Recombinase, conserved site JCP88_RS05190 IPR025827 Recombinase zinc beta ribbon domain JCP88_RS05200 IPR001387 Cro/C1-type helix-turn-helix domain JCP88_RS05200 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS05240 IPR017482 Putative phage-type endonuclease JCP88_RS05240 IPR011604 Exonuclease, phage-type/RecB, C-terminal JCP88_RS05240 IPR019080 YqaJ viral recombinase JCP88_RS05240 IPR011335 Restriction endonuclease type II-like JCP88_RS05245 IPR018330 RecT family JCP88_RS05245 IPR004590 DNA single-strand annealing protein RecT JCP88_RS05255 IPR024633 DnaA N-terminal domain JCP88_RS05255 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JCP88_RS05255 IPR038454 DnaA, N-terminal domain superfamily JCP88_RS05255 IPR020591 Chromosomal replication control, initiator DnaA-like JCP88_RS05255 IPR001957 Chromosomal replication control, initiator DnaA JCP88_RS05255 IPR003593 AAA+ ATPase domain JCP88_RS05255 IPR013159 Chromosomal replication initiator, DnaA C-terminal JCP88_RS05255 IPR010921 Trp repressor/replication initiator JCP88_RS05255 IPR013317 Chromosomal replication initiator protein DnaA JCP88_RS05255 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS05305 IPR006524 Transcription activator, ArpU family JCP88_RS05400 IPR011055 Duplicated hybrid motif JCP88_RS05400 IPR008258 Transglycosylase SLT domain 1 JCP88_RS05400 IPR000189 Prokaryotic transglycosylase, active site JCP88_RS05400 IPR023346 Lysozyme-like domain superfamily JCP88_RS05400 IPR016047 Peptidase M23 JCP88_RS05400 IPR010090 Phage tail tape measure protein JCP88_RS05485 IPR000064 Endopeptidase, NLPC/P60 domain JCP88_RS05485 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS05485 IPR023346 Lysozyme-like domain superfamily JCP88_RS05495 IPR003593 AAA+ ATPase domain JCP88_RS05495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS05495 IPR002611 IstB-like ATP-binding protein JCP88_RS05495 IPR001270 ClpA/B family JCP88_RS05495 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein JCP88_RS05505 IPR002559 Transposase, IS4-like JCP88_RS05505 IPR012337 Ribonuclease H-like superfamily JCP88_RS05520 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS05520 IPR000835 MarR-type HTH domain JCP88_RS05520 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS05520 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS05530 IPR000843 LacI-type HTH domain JCP88_RS05530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS05530 IPR028082 Periplasmic binding protein-like I JCP88_RS05540 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS05540 IPR003352 Phosphotransferase system, EIIC JCP88_RS05540 IPR010973 Phosphotransferase system, sucrose-specific IIBC component JCP88_RS05540 IPR036878 Glucose permease domain IIB JCP88_RS05540 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS05540 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS05545 IPR011055 Duplicated hybrid motif JCP88_RS05545 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS05550 IPR000600 ROK family JCP88_RS05555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS05555 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS05555 IPR003593 AAA+ ATPase domain JCP88_RS05555 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JCP88_RS05555 IPR001550 Transcription antiterminator, conserved site JCP88_RS05555 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS05555 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS05555 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS05555 IPR011608 PRD domain JCP88_RS05555 IPR002078 RNA polymerase sigma factor 54 interaction domain JCP88_RS05555 IPR036634 PRD domain superfamily JCP88_RS05560 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JCP88_RS05565 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS05570 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup JCP88_RS05570 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS05570 IPR013789 Phosphotransferase system, mannose family IIA component JCP88_RS05570 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS05570 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS05570 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS05570 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS05580 IPR006232 Sucrose-6-phosphate hydrolase JCP88_RS05580 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JCP88_RS05580 IPR013148 Glycosyl hydrolase family 32, N-terminal JCP88_RS05580 IPR013189 Glycosyl hydrolase family 32, C-terminal JCP88_RS05580 IPR018053 Glycoside hydrolase, family 32, active site JCP88_RS05580 IPR001362 Glycoside hydrolase, family 32 JCP88_RS05580 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JCP88_RS05600 IPR024463 Transposase TnpC, homeodomain JCP88_RS05600 IPR024474 Zinc-finger binding domain of transposase IS66 JCP88_RS05600 IPR039552 Transposase IS66, C-terminal JCP88_RS05600 IPR004291 Transposase, IS66 JCP88_RS05625 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS05625 IPR011932 Tyrosine recombinase XerD JCP88_RS05625 IPR023009 Tyrosine recombinase XerC/XerD JCP88_RS05625 IPR002104 Integrase, catalytic domain JCP88_RS05625 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS05625 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS05625 IPR010998 Integrase/recombinase, N-terminal JCP88_RS05680 IPR011701 Major facilitator superfamily JCP88_RS05680 IPR020846 Major facilitator superfamily domain JCP88_RS05680 IPR036259 MFS transporter superfamily JCP88_RS05680 IPR005829 Sugar transporter, conserved site JCP88_RS05685 IPR000551 MerR-type HTH domain JCP88_RS05685 IPR009061 Putative DNA-binding domain superfamily JCP88_RS05690 IPR005119 LysR, substrate-binding JCP88_RS05690 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain JCP88_RS05690 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS05690 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS05690 IPR000847 Transcription regulator HTH, LysR JCP88_RS05700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS05700 IPR035906 MetI-like superfamily JCP88_RS05710 IPR001207 Transposase, mutator type JCP88_RS05720 IPR029035 DHS-like NAD/FAD-binding domain superfamily JCP88_RS05720 IPR029061 Thiamin diphosphate-binding fold JCP88_RS05720 IPR012000 Thiamine pyrophosphate enzyme, central domain JCP88_RS05720 IPR012782 Acetolactate synthase, catabolic JCP88_RS05720 IPR000399 TPP-binding enzyme, conserved site JCP88_RS05720 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JCP88_RS05720 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JCP88_RS05725 IPR005128 Alpha-acetolactate decarboxylase JCP88_RS05730 IPR000614 Free Met sulfoxide reductase conserved site JCP88_RS05730 IPR003018 GAF domain JCP88_RS05730 IPR029016 GAF-like domain superfamily JCP88_RS05750 IPR001207 Transposase, mutator type JCP88_RS05775 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS05775 IPR011006 CheY-like superfamily JCP88_RS05775 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS05775 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS05775 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS05775 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS05780 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS05780 IPR003660 HAMP domain JCP88_RS05780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS05780 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS05780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS05780 IPR005467 Histidine kinase domain JCP88_RS05780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS05800 IPR000917 Sulfatase, N-terminal JCP88_RS05800 IPR017850 Alkaline-phosphatase-like, core domain superfamily JCP88_RS05800 IPR012160 Lipoteichoic acid synthase-like JCP88_RS05805 IPR015947 PUA-like superfamily JCP88_RS05805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS05805 IPR019614 S-adenosylmethionine-dependent methyltransferase JCP88_RS05805 IPR002478 PUA domain JCP88_RS05805 IPR041532 RlmI, PUA-like domain JCP88_RS05805 IPR036974 PUA domain superfamily JCP88_RS05810 IPR013785 Aldolase-type TIM barrel JCP88_RS05810 IPR001381 3-dehydroquinate dehydratase type I JCP88_RS05810 IPR018508 3-dehydroquinate dehydratase, active site JCP88_RS05815 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JCP88_RS05815 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JCP88_RS05815 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JCP88_RS05820 IPR023166 HI0933-like insert domain superfamily JCP88_RS05820 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS05820 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like JCP88_RS05825 IPR036291 NAD(P)-binding domain superfamily JCP88_RS05825 IPR033922 NAD(P) binding domain of glutamate dehydrogenase JCP88_RS05825 IPR014362 Glutamate dehydrogenase JCP88_RS05825 IPR033524 Leu/Phe/Val dehydrogenases active site JCP88_RS05825 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase JCP88_RS05825 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain JCP88_RS05825 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal JCP88_RS05830 IPR001672 Phosphoglucose isomerase (PGI) JCP88_RS05830 IPR035482 Phosphoglucose isomerase, SIS domain 2 JCP88_RS05830 IPR035476 Phosphoglucose isomerase, SIS domain 1 JCP88_RS05830 IPR018189 Phosphoglucose isomerase, conserved site JCP88_RS05860 IPR030395 Glycerophosphodiester phosphodiesterase domain JCP88_RS05860 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily JCP88_RS05875 IPR029032 AhpD-like JCP88_RS05875 IPR003779 Carboxymuconolactone decarboxylase-like JCP88_RS05875 IPR012788 4-carboxymuconolactone decarboxylase JCP88_RS05895 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS05895 IPR009057 Homeobox-like domain superfamily JCP88_RS05895 IPR013570 Transcription regulator YsiA, C-terminal JCP88_RS05895 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JCP88_RS05905 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS05905 IPR029132 Choloylglycine hydrolase/NAAA C-terminal JCP88_RS05910 IPR006426 Asparagine synthase, glutamine-hydrolyzing JCP88_RS05910 IPR001962 Asparagine synthase JCP88_RS05910 IPR033738 Asparagine synthase, N-terminal domain JCP88_RS05910 IPR017932 Glutamine amidotransferase type 2 domain JCP88_RS05910 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS05915 IPR018691 Protein of unknown function DUF2188 JCP88_RS05920 IPR011332 Zinc-binding ribosomal protein JCP88_RS05920 IPR001705 Ribosomal protein L33 JCP88_RS05920 IPR018264 Ribosomal protein L33, conserved site JCP88_RS05920 IPR038584 Ribosomal protein L33 superfamily JCP88_RS05925 IPR001796 Dihydrofolate reductase domain JCP88_RS05925 IPR012259 Dihydrofolate reductase JCP88_RS05925 IPR017925 Dihydrofolate reductase conserved site JCP88_RS05925 IPR024072 Dihydrofolate reductase-like domain superfamily JCP88_RS05935 IPR003593 AAA+ ATPase domain JCP88_RS05935 IPR003439 ABC transporter-like JCP88_RS05935 IPR017871 ABC transporter, conserved site JCP88_RS05935 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS05940 IPR037294 ABC transporter, BtuC-like JCP88_RS05940 IPR000522 ABC transporter, permease protein, BtuC-like JCP88_RS05945 IPR037294 ABC transporter, BtuC-like JCP88_RS05945 IPR000522 ABC transporter, permease protein, BtuC-like JCP88_RS05950 IPR037171 NagB/RpiA transferase-like JCP88_RS05950 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JCP88_RS05950 IPR002698 5-formyltetrahydrofolate cyclo-ligase JCP88_RS05965 IPR004654 Glucokinase ROK JCP88_RS05965 IPR000600 ROK family JCP88_RS05970 IPR036873 Rhodanese-like domain superfamily JCP88_RS05970 IPR001763 Rhodanese-like domain JCP88_RS05975 IPR007438 Protein of unknown function DUF488 JCP88_RS05990 IPR005886 UDP-glucose 4-epimerase JCP88_RS05990 IPR016040 NAD(P)-binding domain JCP88_RS05990 IPR036291 NAD(P)-binding domain superfamily JCP88_RS05995 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal JCP88_RS05995 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal JCP88_RS05995 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site JCP88_RS05995 IPR000766 Galactose-1-phosphate uridyl transferase, class II JCP88_RS06000 IPR028082 Periplasmic binding protein-like I JCP88_RS06000 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS06000 IPR000843 LacI-type HTH domain JCP88_RS06005 IPR000905 Gcp-like domain JCP88_RS06005 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB JCP88_RS06010 IPR000182 GNAT domain JCP88_RS06010 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS06015 IPR000182 GNAT domain JCP88_RS06015 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS06015 IPR006464 N-acetyltransferase RimI/Ard1 JCP88_RS06020 IPR000905 Gcp-like domain JCP88_RS06020 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD JCP88_RS06020 IPR017860 Peptidase M22, conserved site JCP88_RS06020 IPR017861 Kae1/TsaD family JCP88_RS06025 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS06025 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS06025 IPR014710 RmlC-like jelly roll fold JCP88_RS06025 IPR012318 Crp-type HTH domain JCP88_RS06025 IPR000595 Cyclic nucleotide-binding domain JCP88_RS06025 IPR018490 Cyclic nucleotide-binding-like JCP88_RS06030 IPR003876 Arginine deiminase JCP88_RS06035 IPR024904 Ornithine carbamoyltransferase JCP88_RS06035 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JCP88_RS06035 IPR006130 Aspartate/ornithine carbamoyltransferase JCP88_RS06035 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily JCP88_RS06035 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JCP88_RS06035 IPR002292 Ornithine/putrescine carbamoyltransferase JCP88_RS06040 IPR036393 Acetylglutamate kinase-like superfamily JCP88_RS06040 IPR001048 Aspartate/glutamate/uridylate kinase JCP88_RS06040 IPR003964 Carbamate kinase JCP88_RS06050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS06050 IPR035684 Arginyl-tRNA synthetase, catalytic core domain JCP88_RS06050 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily JCP88_RS06050 IPR005148 Arginyl tRNA synthetase N-terminal domain JCP88_RS06050 IPR001278 Arginine-tRNA ligase JCP88_RS06050 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS06050 IPR008909 DALR anticodon binding JCP88_RS06055 IPR006323 Phosphonoacetaldehyde hydrolase JCP88_RS06055 IPR006439 HAD hydrolase, subfamily IA JCP88_RS06055 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS06055 IPR023214 HAD superfamily JCP88_RS06055 IPR036412 HAD-like superfamily JCP88_RS06055 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS06060 IPR036412 HAD-like superfamily JCP88_RS06060 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS06060 IPR023214 HAD superfamily JCP88_RS06060 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS06060 IPR006323 Phosphonoacetaldehyde hydrolase JCP88_RS06065 IPR000192 Aminotransferase class V domain JCP88_RS06065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS06065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS06065 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS06065 IPR012703 2-aminoethylphosphonate--pyruvate transaminase JCP88_RS06065 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase JCP88_RS06070 IPR020899 Arginine repressor, C-terminal JCP88_RS06070 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS06070 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS06070 IPR036251 Arginine repressor, C-terminal domain superfamily JCP88_RS06070 IPR001669 Arginine repressor JCP88_RS06070 IPR020900 Arginine repressor, DNA-binding domain JCP88_RS06075 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid JCP88_RS06075 IPR018130 Ribosomal protein S2, conserved site JCP88_RS06075 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JCP88_RS06075 IPR001865 Ribosomal protein S2 JCP88_RS06080 IPR001816 Translation elongation factor EFTs/EF1B JCP88_RS06080 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation JCP88_RS06080 IPR018101 Translation elongation factor Ts, conserved site JCP88_RS06080 IPR009060 UBA-like superfamily JCP88_RS06080 IPR036402 Elongation factor Ts, dimerisation domain superfamily JCP88_RS06085 IPR001048 Aspartate/glutamate/uridylate kinase JCP88_RS06085 IPR036393 Acetylglutamate kinase-like superfamily JCP88_RS06085 IPR011817 Uridylate kinase JCP88_RS06085 IPR015963 Uridylate kinase, bacteria JCP88_RS06090 IPR002661 Ribosome recycling factor JCP88_RS06090 IPR023584 Ribosome recycling factor domain JCP88_RS06090 IPR036191 RRF superfamily JCP88_RS06100 IPR001441 Decaprenyl diphosphate synthase-like JCP88_RS06100 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site JCP88_RS06100 IPR036424 Decaprenyl diphosphate synthase-like superfamily JCP88_RS06105 IPR000374 Phosphatidate cytidylyltransferase JCP88_RS06110 IPR041489 PDZ domain 6 JCP88_RS06110 IPR001478 PDZ domain JCP88_RS06110 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase JCP88_RS06110 IPR036034 PDZ superfamily JCP88_RS06110 IPR008915 Peptidase M50 JCP88_RS06115 IPR002316 Proline-tRNA ligase, class IIa JCP88_RS06115 IPR036621 Anticodon-binding domain superfamily JCP88_RS06115 IPR004154 Anticodon-binding JCP88_RS06115 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS06115 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JCP88_RS06115 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 JCP88_RS06115 IPR033730 Prokaryote proline-tRNA ligase core domain JCP88_RS06115 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JCP88_RS06115 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type JCP88_RS06115 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JCP88_RS06120 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type JCP88_RS06120 IPR013520 Exonuclease, RNase T/DNA polymerase III JCP88_RS06120 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JCP88_RS06120 IPR029460 DNA polymerase, helix-hairpin-helix motif JCP88_RS06120 IPR028112 DNA polymerase III polC-type, N-terminal domain I JCP88_RS06120 IPR024754 DNA polymerase III polC-like, N-terminal domain II JCP88_RS06120 IPR040982 DNA polymerase III alpha subunit finger domain JCP88_RS06120 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JCP88_RS06120 IPR003141 Polymerase/histidinol phosphatase, N-terminal JCP88_RS06120 IPR012337 Ribonuclease H-like superfamily JCP88_RS06120 IPR036397 Ribonuclease H superfamily JCP88_RS06120 IPR004013 PHP domain JCP88_RS06120 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS06125 IPR003728 Ribosome maturation factor RimP JCP88_RS06125 IPR035956 RimP, N-terminal domain superfamily JCP88_RS06125 IPR028989 Ribosome maturation factor RimP, N-terminal JCP88_RS06125 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JCP88_RS06125 IPR028998 Ribosome maturation factor RimP, C-terminal JCP88_RS06130 IPR013735 Transcription factor NusA, N-terminal JCP88_RS06130 IPR010213 Transcription termination factor NusA JCP88_RS06130 IPR022967 RNA-binding domain, S1 JCP88_RS06130 IPR036555 NusA, N-terminal domain superfamily JCP88_RS06130 IPR030842 Transcription termination/antitermination protein NusA, bacterial JCP88_RS06130 IPR004087 K Homology domain JCP88_RS06130 IPR015946 K homology domain-like, alpha/beta JCP88_RS06130 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS06130 IPR009019 K homology domain superfamily, prokaryotic type JCP88_RS06130 IPR025249 KH domain, NusA-like JCP88_RS06130 IPR003029 S1 domain JCP88_RS06135 IPR035931 YlxR-like superfamily JCP88_RS06135 IPR007393 Domain of unknown function DUF448 JCP88_RS06135 IPR037465 Uncharacterized protein YlxR JCP88_RS06140 IPR039109 Ribosomal protein L30/YlxQ JCP88_RS06140 IPR039107 Ribosomal protein YlxQ JCP88_RS06140 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 JCP88_RS06140 IPR029064 50S ribosomal protein L30e-like JCP88_RS06145 IPR006847 Translation initiation factor IF-2, N-terminal JCP88_RS06145 IPR000795 Transcription factor, GTP-binding domain JCP88_RS06145 IPR000178 Translation initiation factor aIF-2, bacterial-like JCP88_RS06145 IPR015760 Translation initiation factor IF- 2 JCP88_RS06145 IPR023115 Translation initiation factor IF- 2, domain 3 JCP88_RS06145 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JCP88_RS06145 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS06145 IPR005225 Small GTP-binding protein domain JCP88_RS06145 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06150 IPR000238 Ribosome-binding factor A JCP88_RS06150 IPR015946 K homology domain-like, alpha/beta JCP88_RS06150 IPR023799 Ribosome-binding factor A domain superfamily JCP88_RS06150 IPR020053 Ribosome-binding factor A, conserved site JCP88_RS06160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS06160 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like JCP88_RS06160 IPR035906 MetI-like superfamily JCP88_RS06170 IPR002501 Pseudouridine synthase II, N-terminal JCP88_RS06170 IPR014780 tRNA pseudouridine synthase II, TruB JCP88_RS06170 IPR032819 tRNA pseudouridylate synthase B, C-terminal JCP88_RS06170 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS06175 IPR023465 Riboflavin kinase domain superfamily JCP88_RS06175 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic JCP88_RS06175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS06175 IPR023468 Riboflavin kinase JCP88_RS06175 IPR004821 Cytidyltransferase-like domain JCP88_RS06175 IPR015864 FAD synthetase JCP88_RS06175 IPR002606 Riboflavin kinase, bacterial JCP88_RS06180 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS06180 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS06180 IPR036291 NAD(P)-binding domain superfamily JCP88_RS06185 IPR010651 Sugar transport protein JCP88_RS06190 IPR041657 Helix-turn-helix domain, group 17 JCP88_RS06195 IPR014922 Domain of unknown function DUF1801 JCP88_RS06205 IPR029062 Class I glutamine amidotransferase-like JCP88_RS06205 IPR040449 LD-carboxypeptidase, N-terminal JCP88_RS06205 IPR040921 LD-carboxypeptidase, C-terminal JCP88_RS06205 IPR003507 Peptidase family S66 JCP88_RS06205 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily JCP88_RS06205 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal JCP88_RS06215 IPR029062 Class I glutamine amidotransferase-like JCP88_RS06215 IPR002818 DJ-1/PfpI JCP88_RS06225 IPR004559 Heme chaperone HemW-like JCP88_RS06225 IPR007197 Radical SAM JCP88_RS06225 IPR023404 Radical SAM, alpha/beta horseshoe JCP88_RS06225 IPR010723 HemN, C-terminal JCP88_RS06225 IPR006638 Elp3/MiaB/NifB JCP88_RS06225 IPR034505 Anaerobic coproporphyrinogen-III oxidase JCP88_RS06230 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily JCP88_RS06230 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS06230 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS06230 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal JCP88_RS06230 IPR002571 Heat-inducible transcription repressor HrcA JCP88_RS06230 IPR029016 GAF-like domain superfamily JCP88_RS06235 IPR000740 GrpE nucleotide exchange factor JCP88_RS06235 IPR009012 GrpE nucleotide exchange factor, head JCP88_RS06235 IPR013805 GrpE nucleotide exchange factor, coiled-coil JCP88_RS06240 IPR012725 Chaperone DnaK JCP88_RS06240 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JCP88_RS06240 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JCP88_RS06240 IPR013126 Heat shock protein 70 family JCP88_RS06240 IPR018181 Heat shock protein 70, conserved site JCP88_RS06245 IPR036869 Chaperone J-domain superfamily JCP88_RS06245 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JCP88_RS06245 IPR001623 DnaJ domain JCP88_RS06245 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JCP88_RS06245 IPR008971 HSP40/DnaJ peptide-binding JCP88_RS06245 IPR018253 DnaJ domain, conserved site JCP88_RS06245 IPR002939 Chaperone DnaJ, C-terminal JCP88_RS06245 IPR012724 Chaperone DnaJ JCP88_RS06250 IPR042070 PucR C-terminal helix-turn-helix domain superfamily JCP88_RS06250 IPR025736 PucR C-terminal helix-turn-helix domain JCP88_RS06250 IPR008599 Putative sugar diacid recognition JCP88_RS06250 IPR041522 CdaR, GGDEF-like domain JCP88_RS06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06260 IPR003439 ABC transporter-like JCP88_RS06260 IPR003593 AAA+ ATPase domain JCP88_RS06260 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JCP88_RS06260 IPR017871 ABC transporter, conserved site JCP88_RS06265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS06265 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS06265 IPR035906 MetI-like superfamily JCP88_RS06270 IPR024759 UvrB, YAD/RRR-motif-containing domain JCP88_RS06270 IPR041471 UvrB, interaction domain JCP88_RS06270 IPR004807 UvrABC system, subunit B JCP88_RS06270 IPR036876 UVR domain superfamily JCP88_RS06270 IPR001943 UVR domain JCP88_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06270 IPR001650 Helicase, C-terminal JCP88_RS06270 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS06270 IPR006935 Helicase/UvrB, N-terminal JCP88_RS06275 IPR003593 AAA+ ATPase domain JCP88_RS06275 IPR041102 UvrA, interaction domain JCP88_RS06275 IPR003439 ABC transporter-like JCP88_RS06275 IPR017871 ABC transporter, conserved site JCP88_RS06275 IPR041552 UvrA DNA-binding domain JCP88_RS06275 IPR004602 UvrABC system subunit A JCP88_RS06275 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06280 IPR011761 ATP-grasp fold JCP88_RS06285 IPR004380 Aspartate racemase JCP88_RS06285 IPR001920 Asp/Glu racemase JCP88_RS06285 IPR033134 Asp/Glu racemase, active site 2 JCP88_RS06285 IPR018187 Asp/Glu racemase, active site 1 JCP88_RS06285 IPR015942 Asp/Glu/hydantoin racemase JCP88_RS06290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06290 IPR005337 RapZ-like family JCP88_RS06295 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JCP88_RS06295 IPR010119 Gluconeogenesis factor JCP88_RS06295 IPR038136 Gluconeogenesis factor superfamily JCP88_RS06300 IPR027434 Homing endonuclease JCP88_RS06300 IPR023054 Sporulation regulator WhiA, C-terminal JCP88_RS06300 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS06300 IPR039518 WhiA, LAGLIDADG-like domain JCP88_RS06300 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain JCP88_RS06300 IPR003802 Sporulation regulator WhiA JCP88_RS06360 IPR034701 Diadenylate cyclase CdaA JCP88_RS06360 IPR014046 Diadenylate cyclase JCP88_RS06360 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JCP88_RS06360 IPR003390 DNA integrity scanning protein, DisA, N-terminal JCP88_RS06370 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JCP88_RS06370 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JCP88_RS06370 IPR006352 Phosphoglucosamine mutase, bacterial type JCP88_RS06370 IPR018247 EF-Hand 1, calcium-binding site JCP88_RS06370 IPR005841 Alpha-D-phosphohexomutase superfamily JCP88_RS06370 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JCP88_RS06370 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JCP88_RS06370 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JCP88_RS06370 IPR016066 Alpha-D-phosphohexomutase, conserved site JCP88_RS06370 IPR005843 Alpha-D-phosphohexomutase, C-terminal JCP88_RS06375 IPR035466 GlmS/AgaS, SIS domain 1 JCP88_RS06375 IPR017932 Glutamine amidotransferase type 2 domain JCP88_RS06375 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS06375 IPR035490 GlmS/FrlB, SIS domain 2 JCP88_RS06375 IPR001347 Sugar isomerase (SIS) JCP88_RS06375 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising JCP88_RS06385 IPR002142 Peptidase S49 JCP88_RS06385 IPR004635 Peptidase S49, SppA JCP88_RS06385 IPR029045 ClpP/crotonase-like domain superfamily JCP88_RS06390 IPR010432 RDD JCP88_RS06400 IPR005215 Trigger factor JCP88_RS06400 IPR008880 Trigger factor, C-terminal JCP88_RS06400 IPR037041 Trigger factor, C-terminal domain superfamily JCP88_RS06400 IPR008881 Trigger factor, ribosome-binding, bacterial JCP88_RS06400 IPR036611 Trigger factor ribosome-binding domain superfamily JCP88_RS06400 IPR027304 Trigger factor/SurA domain superfamily JCP88_RS06400 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JCP88_RS06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06405 IPR004487 Clp protease, ATP-binding subunit ClpX JCP88_RS06405 IPR003593 AAA+ ATPase domain JCP88_RS06405 IPR038366 Zinc finger, ClpX C4-type superfamily JCP88_RS06405 IPR010603 Zinc finger, ClpX C4-type JCP88_RS06405 IPR019489 Clp ATPase, C-terminal JCP88_RS06405 IPR003959 ATPase, AAA-type, core JCP88_RS06410 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC JCP88_RS06410 IPR030393 EngB-type guanine nucleotide-binding (G) domain JCP88_RS06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06410 IPR006073 GTP binding domain JCP88_RS06430 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JCP88_RS06430 IPR037171 NagB/RpiA transferase-like JCP88_RS06430 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS06430 IPR014036 DeoR C-terminal sensor domain JCP88_RS06430 IPR001034 DeoR-type HTH domain JCP88_RS06435 IPR029056 Ribokinase-like JCP88_RS06435 IPR022463 Fructose 1-phosphate kinase JCP88_RS06435 IPR017583 Tagatose/fructose phosphokinase JCP88_RS06435 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JCP88_RS06435 IPR011611 Carbohydrate kinase PfkB JCP88_RS06440 IPR004715 Phosphotransferase system, IIA component fructose subfamily JCP88_RS06440 IPR036095 PTS system IIB component-like superfamily JCP88_RS06440 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS06440 IPR016152 Phosphotransferase/anion transporter JCP88_RS06440 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS06440 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JCP88_RS06440 IPR006327 Phosphotransferase system, fructose IIC component JCP88_RS06440 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS06440 IPR002178 PTS EIIA type-2 domain JCP88_RS06445 IPR001807 Chloride channel, voltage gated JCP88_RS06445 IPR014743 Chloride channel, core JCP88_RS06445 IPR023861 Chloride channel, ClcA JCP88_RS06450 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS06450 IPR005751 ATP-dependent DNA helicase PcrA JCP88_RS06450 IPR013986 DExx box DNA helicase domain superfamily JCP88_RS06450 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06450 IPR034739 UvrD/AddA helicase, N-terminal JCP88_RS06450 IPR000212 DNA helicase, UvrD/REP type JCP88_RS06450 IPR014017 UvrD-like DNA helicase, C-terminal JCP88_RS06455 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type JCP88_RS06455 IPR041663 DisA/LigA, helix-hairpin-helix motif JCP88_RS06455 IPR036420 BRCT domain superfamily JCP88_RS06455 IPR004150 NAD-dependent DNA ligase, OB-fold JCP88_RS06455 IPR010994 RuvA domain 2-like JCP88_RS06455 IPR001357 BRCT domain JCP88_RS06455 IPR033136 NAD-dependent DNA ligase, conserved site JCP88_RS06455 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS06455 IPR013840 NAD-dependent DNA ligase, N-terminal JCP88_RS06455 IPR013839 NAD-dependent DNA ligase, adenylation JCP88_RS06455 IPR001679 NAD-dependent DNA ligase JCP88_RS06455 IPR018239 NAD-dependent DNA ligase, active site JCP88_RS06460 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C JCP88_RS06460 IPR003837 Glu-tRNAGln amidotransferase C subunit JCP88_RS06465 IPR036928 Amidase signature (AS) superfamily JCP88_RS06465 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit JCP88_RS06465 IPR000120 Amidase JCP88_RS06465 IPR020556 Amidase, conserved site JCP88_RS06465 IPR023631 Amidase signature domain JCP88_RS06470 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E JCP88_RS06470 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic JCP88_RS06470 IPR018027 Asn/Gln amidotransferase JCP88_RS06470 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like JCP88_RS06470 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JCP88_RS06470 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit JCP88_RS06470 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site JCP88_RS06470 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 JCP88_RS06470 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 JCP88_RS06475 IPR005218 Diacylglycerol/lipid kinase JCP88_RS06475 IPR001206 Diacylglycerol kinase, catalytic domain JCP88_RS06475 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JCP88_RS06475 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JCP88_RS06480 IPR030390 RNA methyltransferase TrmA, active site JCP88_RS06480 IPR002792 TRAM domain JCP88_RS06480 IPR010280 (Uracil-5)-methyltransferase family JCP88_RS06480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS06480 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS06480 IPR030391 RNA methyltransferase TrmA, conserved site JCP88_RS06490 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal JCP88_RS06490 IPR038071 UROD/MetE-like superfamily JCP88_RS06500 IPR000843 LacI-type HTH domain JCP88_RS06500 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS06500 IPR028082 Periplasmic binding protein-like I JCP88_RS06505 IPR013785 Aldolase-type TIM barrel JCP88_RS06505 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS06505 IPR002252 Glycoside hydrolase family 36 JCP88_RS06505 IPR031704 Glycosyl hydrolase family 36, N-terminal JCP88_RS06505 IPR031705 Glycosyl hydrolase family 36, C-terminal JCP88_RS06505 IPR000111 Glycoside hydrolase family 27/36, conserved site JCP88_RS06505 IPR017853 Glycoside hydrolase superfamily JCP88_RS06505 IPR038417 Alpha-galactosidase, N-terminal domain superfamily JCP88_RS06510 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JCP88_RS06510 IPR006101 Glycoside hydrolase, family 2 JCP88_RS06510 IPR008979 Galactose-binding-like domain superfamily JCP88_RS06510 IPR017853 Glycoside hydrolase superfamily JCP88_RS06510 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JCP88_RS06510 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JCP88_RS06510 IPR013783 Immunoglobulin-like fold JCP88_RS06510 IPR023230 Glycoside hydrolase, family 2, conserved site JCP88_RS06510 IPR023232 Glycoside hydrolase, family 2, active site JCP88_RS06510 IPR006103 Glycoside hydrolase family 2, catalytic domain JCP88_RS06510 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase JCP88_RS06515 IPR004199 Beta galactosidase small chain/ domain 5 JCP88_RS06515 IPR014718 Glycoside hydrolase-type carbohydrate-binding JCP88_RS06515 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase JCP88_RS06515 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS06520 IPR013785 Aldolase-type TIM barrel JCP88_RS06520 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 JCP88_RS06520 IPR041071 DAHP synthase ferredoxin-like domain JCP88_RS06520 IPR006218 DAHP synthetase I/KDSA JCP88_RS06525 IPR030960 3-dehydroquinate synthase domain JCP88_RS06525 IPR030963 3-dehydroquinate synthase family JCP88_RS06525 IPR016037 3-dehydroquinate synthase AroB JCP88_RS06530 IPR020541 Chorismate synthase, conserved site JCP88_RS06530 IPR035904 Chorismate synthase AroC superfamily JCP88_RS06530 IPR000453 Chorismate synthase JCP88_RS06535 IPR002912 ACT domain JCP88_RS06535 IPR036291 NAD(P)-binding domain superfamily JCP88_RS06535 IPR003099 Prephenate dehydrogenase JCP88_RS06535 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS06540 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JCP88_RS06540 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JCP88_RS06540 IPR036968 Enolpyruvate transferase domain superfamily JCP88_RS06540 IPR001986 Enolpyruvate transferase domain JCP88_RS06540 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site JCP88_RS06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06545 IPR031322 Shikimate kinase/gluconokinase JCP88_RS06545 IPR000623 Shikimate kinase/Threonine synthase-like 1 JCP88_RS06545 IPR023000 Shikimate kinase, conserved site JCP88_RS06550 IPR001086 Prephenate dehydratase JCP88_RS06550 IPR002912 ACT domain JCP88_RS06550 IPR018528 Prephenate dehydratase, conserved site JCP88_RS06555 IPR010559 Signal transduction histidine kinase, internal region JCP88_RS06555 IPR005467 Histidine kinase domain JCP88_RS06555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS06555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS06555 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS06555 IPR003660 HAMP domain JCP88_RS06555 IPR033479 Double Cache domain 1 JCP88_RS06560 IPR020449 Transcription regulator HTH, AraC- type JCP88_RS06560 IPR037923 Transcription regulator HTH-like JCP88_RS06560 IPR009057 Homeobox-like domain superfamily JCP88_RS06560 IPR017853 Glycoside hydrolase superfamily JCP88_RS06560 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS06565 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS06565 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS06565 IPR011006 CheY-like superfamily JCP88_RS06565 IPR009057 Homeobox-like domain superfamily JCP88_RS06570 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS06575 IPR035906 MetI-like superfamily JCP88_RS06575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS06580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS06580 IPR035906 MetI-like superfamily JCP88_RS06585 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B JCP88_RS06590 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B JCP88_RS06610 IPR029033 Histidine phosphatase superfamily JCP88_RS06610 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JCP88_RS06610 IPR005952 Phosphoglycerate mutase 1 JCP88_RS06610 IPR013078 Histidine phosphatase superfamily, clade-1 JCP88_RS06615 IPR036412 HAD-like superfamily JCP88_RS06615 IPR006439 HAD hydrolase, subfamily IA JCP88_RS06615 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JCP88_RS06615 IPR037512 Phosphoglycolate phosphatase, prokaryotic JCP88_RS06615 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic JCP88_RS06615 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS06615 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS06615 IPR023214 HAD superfamily JCP88_RS06625 IPR001991 Sodium:dicarboxylate symporter JCP88_RS06625 IPR036458 Sodium:dicarboxylate symporter superfamily JCP88_RS06635 IPR012337 Ribonuclease H-like superfamily JCP88_RS06635 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS06635 IPR001584 Integrase, catalytic core JCP88_RS06640 IPR020936 Uncharacterised protein family UPF0176 JCP88_RS06640 IPR036873 Rhodanese-like domain superfamily JCP88_RS06640 IPR022111 Rhodanase, C-terminal JCP88_RS06640 IPR001763 Rhodanese-like domain JCP88_RS06640 IPR040503 UPF0176, acylphosphatase-like domain JCP88_RS06650 IPR023319 Tex-like protein, HTH domain superfamily JCP88_RS06650 IPR006641 YqgF/RNase H-like domain JCP88_RS06650 IPR032639 Tex protein, YqgF-like domain JCP88_RS06650 IPR018974 Tex-like protein, N-terminal JCP88_RS06650 IPR041692 HHH domain 9 JCP88_RS06650 IPR012337 Ribonuclease H-like superfamily JCP88_RS06650 IPR037027 YqgF/RNase H-like domain superfamily JCP88_RS06650 IPR010994 RuvA domain 2-like JCP88_RS06650 IPR022967 RNA-binding domain, S1 JCP88_RS06650 IPR003029 S1 domain JCP88_RS06650 IPR023323 Tex-like domain superfamily JCP88_RS06650 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS06655 IPR006640 SprT-like JCP88_RS06655 IPR023524 Uncharacterised protein family SprT-like JCP88_RS06660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS06660 IPR003848 Domain of unknown function DUF218 JCP88_RS06665 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS06665 IPR004101 Mur ligase, C-terminal JCP88_RS06665 IPR036615 Mur ligase, C-terminal domain superfamily JCP88_RS06665 IPR013221 Mur ligase, central JCP88_RS06665 IPR000713 Mur ligase, N-terminal catalytic domain JCP88_RS06665 IPR005758 UDP-N-acetylmuramate--L-alanine ligase JCP88_RS06675 IPR006214 Bax inhibitor 1-related JCP88_RS06680 IPR002562 3'-5' exonuclease domain JCP88_RS06680 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal JCP88_RS06680 IPR019760 DNA-directed DNA polymerase, family A, conserved site JCP88_RS06680 IPR036397 Ribonuclease H superfamily JCP88_RS06680 IPR002421 5'-3' exonuclease, N-terminal JCP88_RS06680 IPR008918 Helix-hairpin-helix motif, class 2 JCP88_RS06680 IPR018320 DNA polymerase 1 JCP88_RS06680 IPR020045 DNA polymerase I-like, H3TH domain JCP88_RS06680 IPR001098 DNA-directed DNA polymerase, family A, palm domain JCP88_RS06680 IPR012337 Ribonuclease H-like superfamily JCP88_RS06680 IPR029060 PIN-like domain superfamily JCP88_RS06680 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JCP88_RS06680 IPR002298 DNA polymerase A JCP88_RS06685 IPR020629 Formamidopyrimidine-DNA glycosylase JCP88_RS06685 IPR010663 Zinc finger, FPG/IleRS-type JCP88_RS06685 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type JCP88_RS06685 IPR035937 MutM-like, N-terminal JCP88_RS06685 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain JCP88_RS06685 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site JCP88_RS06685 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding JCP88_RS06685 IPR010979 Ribosomal protein S13-like, H2TH JCP88_RS06690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06690 IPR001977 Dephospho-CoA kinase JCP88_RS06700 IPR003796 Ribonucleotide reductase regulator NrdR-like JCP88_RS06700 IPR005144 ATP-cone domain JCP88_RS06710 IPR003593 AAA+ ATPase domain JCP88_RS06710 IPR002611 IstB-like ATP-binding protein JCP88_RS06710 IPR009928 Primosomal DnaI, N-terminal JCP88_RS06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06720 IPR006901 tRNA methyltransferase TrmK JCP88_RS06720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS06725 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JCP88_RS06725 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JCP88_RS06725 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria JCP88_RS06725 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS06730 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS06730 IPR010161 Peptidase M20B, tripeptide aminopeptidase JCP88_RS06730 IPR011650 Peptidase M20, dimerisation domain JCP88_RS06730 IPR002933 Peptidase M20 JCP88_RS06730 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JCP88_RS06735 IPR005218 Diacylglycerol/lipid kinase JCP88_RS06735 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JCP88_RS06735 IPR001206 Diacylglycerol kinase, catalytic domain JCP88_RS06735 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JCP88_RS06750 IPR003593 AAA+ ATPase domain JCP88_RS06750 IPR041546 ClpA/ClpB, AAA lid domain JCP88_RS06750 IPR003959 ATPase, AAA-type, core JCP88_RS06750 IPR017730 Chaperonin ClpB JCP88_RS06750 IPR019489 Clp ATPase, C-terminal JCP88_RS06750 IPR036628 Clp, N-terminal domain superfamily JCP88_RS06750 IPR004176 Clp, N-terminal JCP88_RS06750 IPR001270 ClpA/B family JCP88_RS06750 IPR018368 ClpA/B, conserved site 1 JCP88_RS06750 IPR028299 ClpA/B, conserved site 2 JCP88_RS06750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06770 IPR005225 Small GTP-binding protein domain JCP88_RS06770 IPR038363 LepA, C-terminal domain superfamily JCP88_RS06770 IPR031157 Tr-type G domain, conserved site JCP88_RS06770 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS06770 IPR006297 Elongation factor 4 JCP88_RS06770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06770 IPR000640 Elongation factor EFG, domain V-like JCP88_RS06770 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS06770 IPR035647 EF-G domain III/V-like JCP88_RS06770 IPR013842 GTP-binding protein LepA, C-terminal JCP88_RS06770 IPR035654 Elongation factor 4, domain IV JCP88_RS06770 IPR000795 Transcription factor, GTP-binding domain JCP88_RS06830 IPR003491 Replication initiation factor JCP88_RS06830 IPR040819 Rolling Circle replication initiation protein, N-terminal JCP88_RS06870 IPR025608 TcpE family JCP88_RS06875 IPR016628 ATPase, SAG2001, predicted JCP88_RS06875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS06930 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS06930 IPR011663 UbiC transcription regulator-associated JCP88_RS06930 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS06930 IPR000524 Transcription regulator HTH, GntR JCP88_RS06930 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS06935 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS06935 IPR013118 Mannitol dehydrogenase, C-terminal JCP88_RS06935 IPR013131 Mannitol dehydrogenase, N-terminal JCP88_RS06935 IPR036291 NAD(P)-binding domain superfamily JCP88_RS06935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS06940 IPR036237 Xylose isomerase-like superfamily JCP88_RS06940 IPR004628 Mannonate dehydratase JCP88_RS06945 IPR003766 Uronate isomerase JCP88_RS06945 IPR032466 Metal-dependent hydrolase JCP88_RS06955 IPR001927 Sodium:galactoside symporter JCP88_RS06955 IPR039672 Lactose permease-like JCP88_RS06955 IPR020846 Major facilitator superfamily domain JCP88_RS06955 IPR036259 MFS transporter superfamily JCP88_RS06955 IPR018043 Sodium:galactoside symporter, conserved site JCP88_RS06965 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily JCP88_RS06965 IPR019800 Glycoside hydrolase, family 3, active site JCP88_RS06965 IPR001764 Glycoside hydrolase, family 3, N-terminal JCP88_RS06965 IPR017853 Glycoside hydrolase superfamily JCP88_RS06965 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily JCP88_RS06970 IPR017853 Glycoside hydrolase superfamily JCP88_RS06970 IPR013783 Immunoglobulin-like fold JCP88_RS06970 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JCP88_RS06970 IPR008979 Galactose-binding-like domain superfamily JCP88_RS06970 IPR006101 Glycoside hydrolase, family 2 JCP88_RS06970 IPR023232 Glycoside hydrolase, family 2, active site JCP88_RS06970 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JCP88_RS06970 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JCP88_RS06970 IPR023230 Glycoside hydrolase, family 2, conserved site JCP88_RS06970 IPR006103 Glycoside hydrolase family 2, catalytic domain JCP88_RS06990 IPR010998 Integrase/recombinase, N-terminal JCP88_RS06990 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS06990 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS06990 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS06990 IPR002104 Integrase, catalytic domain JCP88_RS06995 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS06995 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS06995 IPR023009 Tyrosine recombinase XerC/XerD JCP88_RS06995 IPR011932 Tyrosine recombinase XerD JCP88_RS06995 IPR002104 Integrase, catalytic domain JCP88_RS06995 IPR010998 Integrase/recombinase, N-terminal JCP88_RS06995 IPR011931 Tyrosine recombinase XerC JCP88_RS06995 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS07025 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS07025 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07025 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS07030 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS07030 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07030 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS07030 IPR013196 Helix-turn-helix, type 11 JCP88_RS07030 IPR016152 Phosphotransferase/anion transporter JCP88_RS07030 IPR007737 Mga helix-turn-helix domain JCP88_RS07030 IPR011608 PRD domain JCP88_RS07030 IPR036095 PTS system IIB component-like superfamily JCP88_RS07030 IPR002178 PTS EIIA type-2 domain JCP88_RS07030 IPR036634 PRD domain superfamily JCP88_RS07040 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor JCP88_RS07045 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal JCP88_RS07045 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II JCP88_RS07045 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal JCP88_RS07060 IPR013785 Aldolase-type TIM barrel JCP88_RS07060 IPR001585 Transaldolase/Fructose-6-phosphate aldolase JCP88_RS07060 IPR018225 Transaldolase, active site JCP88_RS07060 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial JCP88_RS07060 IPR023001 Fructose-6-phosphate aldolase JCP88_RS07065 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JCP88_RS07065 IPR027304 Trigger factor/SurA domain superfamily JCP88_RS07065 IPR023059 Foldase protein PrsA JCP88_RS07090 IPR036249 Thioredoxin-like superfamily JCP88_RS07090 IPR006660 Arsenate reductase-like JCP88_RS07090 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS07090 IPR023731 Regulatory protein Spx JCP88_RS07100 IPR029058 Alpha/Beta hydrolase fold JCP88_RS07100 IPR022742 Serine aminopeptidase, S33 JCP88_RS07105 IPR019819 Carboxylesterase type B, conserved site JCP88_RS07105 IPR019826 Carboxylesterase type B, active site JCP88_RS07105 IPR002018 Carboxylesterase, type B JCP88_RS07105 IPR029058 Alpha/Beta hydrolase fold JCP88_RS07105 IPR000997 Cholinesterase JCP88_RS07115 IPR000281 Helix-turn-helix protein RpiR JCP88_RS07115 IPR035472 RpiR-like, SIS domain JCP88_RS07115 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07115 IPR009057 Homeobox-like domain superfamily JCP88_RS07115 IPR003836 Glucokinase JCP88_RS07115 IPR001347 Sugar isomerase (SIS) JCP88_RS07120 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JCP88_RS07120 IPR006114 6-phosphogluconate dehydrogenase, C-terminal JCP88_RS07120 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS07120 IPR006184 6-phosphogluconate-binding site JCP88_RS07120 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07120 IPR006183 6-phosphogluconate dehydrogenase JCP88_RS07120 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS07120 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type JCP88_RS07125 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JCP88_RS07125 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP88_RS07125 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JCP88_RS07125 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JCP88_RS07125 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07135 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JCP88_RS07135 IPR016205 Glycerol dehydrogenase JCP88_RS07135 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JCP88_RS07145 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS07150 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup JCP88_RS07150 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS07150 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS07170 IPR004628 Mannonate dehydratase JCP88_RS07170 IPR036237 Xylose isomerase-like superfamily JCP88_RS07175 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS07175 IPR023214 HAD superfamily JCP88_RS07175 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS07175 IPR006439 HAD hydrolase, subfamily IA JCP88_RS07175 IPR036412 HAD-like superfamily JCP88_RS07190 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS07190 IPR002059 Cold-shock protein, DNA-binding JCP88_RS07190 IPR019844 Cold-shock (CSD) domain JCP88_RS07190 IPR011129 Cold shock domain JCP88_RS07190 IPR012156 Cold shock, CspA JCP88_RS07205 IPR001387 Cro/C1-type helix-turn-helix domain JCP88_RS07205 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS07230 IPR023214 HAD superfamily JCP88_RS07230 IPR036412 HAD-like superfamily JCP88_RS07230 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS07235 IPR002495 Glycosyl transferase, family 8 JCP88_RS07235 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS07240 IPR002495 Glycosyl transferase, family 8 JCP88_RS07240 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS07255 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS07255 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07255 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS07270 IPR005531 Alkaline shock protein Asp23 JCP88_RS07275 IPR007341 Transglycosylase-associated protein JCP88_RS07290 IPR001387 Cro/C1-type helix-turn-helix domain JCP88_RS07290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS07295 IPR021354 Protein of unknown function DUF2975 JCP88_RS07315 IPR005531 Alkaline shock protein Asp23 JCP88_RS07320 IPR007341 Transglycosylase-associated protein JCP88_RS07335 IPR024041 Ammonium transporter AmtB-like domain JCP88_RS07335 IPR018047 Ammonium transporter, conserved site JCP88_RS07335 IPR001905 Ammonium transporter JCP88_RS07335 IPR029020 Ammonium/urea transporter JCP88_RS07345 IPR017925 Dihydrofolate reductase conserved site JCP88_RS07345 IPR001796 Dihydrofolate reductase domain JCP88_RS07345 IPR024072 Dihydrofolate reductase-like domain superfamily JCP88_RS07345 IPR012259 Dihydrofolate reductase JCP88_RS07355 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JCP88_RS07355 IPR024072 Dihydrofolate reductase-like domain superfamily JCP88_RS07360 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS07360 IPR001584 Integrase, catalytic core JCP88_RS07360 IPR012337 Ribonuclease H-like superfamily JCP88_RS07375 IPR040819 Rolling Circle replication initiation protein, N-terminal JCP88_RS07375 IPR003491 Replication initiation factor JCP88_RS07395 IPR015868 Glutaminase JCP88_RS07395 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS07410 IPR029061 Thiamin diphosphate-binding fold JCP88_RS07410 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JCP88_RS07410 IPR005475 Transketolase-like, pyrimidine-binding domain JCP88_RS07410 IPR033248 Transketolase, C-terminal domain JCP88_RS07410 IPR005474 Transketolase, N-terminal JCP88_RS07410 IPR020826 Transketolase binding site JCP88_RS07410 IPR005477 Deoxyxylulose-5-phosphate synthase JCP88_RS07420 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase JCP88_RS07420 IPR013785 Aldolase-type TIM barrel JCP88_RS07420 IPR011060 Ribulose-phosphate binding barrel JCP88_RS07425 IPR002563 Flavin reductase like domain JCP88_RS07425 IPR012349 FMN-binding split barrel JCP88_RS07435 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JCP88_RS07435 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JCP88_RS07440 IPR004474 Cell envelope-related transcriptional attenuator domain JCP88_RS07445 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS07445 IPR005311 Penicillin-binding protein, dimerisation domain JCP88_RS07445 IPR032710 NTF2-like domain superfamily JCP88_RS07445 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JCP88_RS07445 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS07445 IPR007887 NTF2-like N-terminal transpeptidase JCP88_RS07450 IPR006153 Cation/H+ exchanger JCP88_RS07450 IPR038770 Sodium/solute symporter superfamily JCP88_RS07450 IPR004771 K+/H+ exchanger JCP88_RS07465 IPR012081 Alkyl hydroperoxide reductase subunit F JCP88_RS07465 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JCP88_RS07465 IPR002109 Glutaredoxin JCP88_RS07465 IPR036249 Thioredoxin-like superfamily JCP88_RS07465 IPR012336 Thioredoxin-like fold JCP88_RS07465 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS07465 IPR023753 FAD/NAD(P)-binding domain JCP88_RS07470 IPR013766 Thioredoxin domain JCP88_RS07470 IPR024706 Peroxiredoxin, AhpC-type JCP88_RS07470 IPR036249 Thioredoxin-like superfamily JCP88_RS07470 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JCP88_RS07470 IPR017559 Alkyl hydroperoxide reductase subunit C JCP88_RS07480 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS07480 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS07480 IPR013118 Mannitol dehydrogenase, C-terminal JCP88_RS07480 IPR013131 Mannitol dehydrogenase, N-terminal JCP88_RS07480 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07485 IPR036237 Xylose isomerase-like superfamily JCP88_RS07485 IPR004628 Mannonate dehydratase JCP88_RS07500 IPR002549 Transmembrane protein TqsA-like JCP88_RS07505 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07505 IPR000835 MarR-type HTH domain JCP88_RS07505 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS07510 IPR036102 OsmC/Ohr superfamily JCP88_RS07510 IPR003718 OsmC/Ohr family JCP88_RS07510 IPR019953 Organic hydroperoxide resistance protein famiy JCP88_RS07510 IPR015946 K homology domain-like, alpha/beta JCP88_RS07520 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS07520 IPR019264 Domain of unknown function DUF2179 JCP88_RS07520 IPR003740 Uncharacterised membrane protein YitT JCP88_RS07525 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JCP88_RS07525 IPR013783 Immunoglobulin-like fold JCP88_RS07525 IPR017853 Glycoside hydrolase superfamily JCP88_RS07525 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain JCP88_RS07530 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS07530 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein JCP88_RS07535 IPR035906 MetI-like superfamily JCP88_RS07535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS07535 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like JCP88_RS07540 IPR035906 MetI-like superfamily JCP88_RS07540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS07545 IPR016546 Maltodextrose utilization protein MalA JCP88_RS07550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS07550 IPR003333 Mycolic acid cyclopropane synthase JCP88_RS07565 IPR001295 Dihydroorotate dehydrogenase, conserved site JCP88_RS07565 IPR033886 Dihydroorotate dehydrogenase, class 1A JCP88_RS07565 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 JCP88_RS07565 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 JCP88_RS07565 IPR013785 Aldolase-type TIM barrel JCP88_RS07565 IPR024920 Dihydroorotate dehydrogenase, class 1 JCP88_RS07565 IPR005720 Dihydroorotate dehydrogenase domain JCP88_RS07570 IPR020556 Amidase, conserved site JCP88_RS07570 IPR000120 Amidase JCP88_RS07570 IPR036928 Amidase signature (AS) superfamily JCP88_RS07570 IPR023631 Amidase signature domain JCP88_RS07575 IPR018313 Solute-binding protein family 3, conserved site JCP88_RS07575 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JCP88_RS07580 IPR035906 MetI-like superfamily JCP88_RS07580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS07580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS07600 IPR008144 Guanylate kinase-like domain JCP88_RS07600 IPR020590 Guanylate kinase, conserved site JCP88_RS07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS07600 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JCP88_RS07600 IPR017665 Guanylate kinase JCP88_RS07605 IPR002668 Concentrative nucleoside transporter N-terminal domain JCP88_RS07605 IPR011657 Concentrative nucleoside transporter C-terminal domain JCP88_RS07605 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial JCP88_RS07605 IPR008276 Concentrative nucleoside transporter JCP88_RS07610 IPR014999 Uncharacterised protein family UPF0371 JCP88_RS07640 IPR036837 Cation efflux protein, cytoplasmic domain superfamily JCP88_RS07640 IPR027469 Cation efflux transmembrane domain superfamily JCP88_RS07640 IPR027470 Cation efflux protein, cytoplasmic domain JCP88_RS07640 IPR002524 Cation efflux protein JCP88_RS07655 IPR002797 Polysaccharide biosynthesis protein JCP88_RS07655 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type JCP88_RS07655 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain JCP88_RS07660 IPR003797 DegV JCP88_RS07675 IPR013780 Glycosyl hydrolase, all-beta JCP88_RS07675 IPR017853 Glycoside hydrolase superfamily JCP88_RS07675 IPR032091 Maltogenic Amylase, C-terminal JCP88_RS07675 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JCP88_RS07680 IPR006340 Protein of unknown function DUF436 JCP88_RS07680 IPR028345 Aminoglycoside 3-N-acetyltransferase-like JCP88_RS07690 IPR029056 Ribokinase-like JCP88_RS07690 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JCP88_RS07690 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase JCP88_RS07715 IPR019060 Domain of unknown function DUF2382 JCP88_RS07715 IPR025889 General stress protein 17M-like domain JCP88_RS07720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS07720 IPR005467 Histidine kinase domain JCP88_RS07720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS07720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS07720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS07720 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS07725 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS07725 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS07725 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07725 IPR011006 CheY-like superfamily JCP88_RS07725 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS07735 IPR003593 AAA+ ATPase domain JCP88_RS07735 IPR003439 ABC transporter-like JCP88_RS07775 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07775 IPR000683 Oxidoreductase, N-terminal JCP88_RS07775 IPR004104 Oxidoreductase, C-terminal JCP88_RS07785 IPR013196 Helix-turn-helix, type 11 JCP88_RS07785 IPR007737 Mga helix-turn-helix domain JCP88_RS07785 IPR011608 PRD domain JCP88_RS07785 IPR036634 PRD domain superfamily JCP88_RS07785 IPR016152 Phosphotransferase/anion transporter JCP88_RS07785 IPR002178 PTS EIIA type-2 domain JCP88_RS07785 IPR036095 PTS system IIB component-like superfamily JCP88_RS07785 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS07785 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS07785 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07785 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS07795 IPR004703 Phosphotransferase system, sugar-specific permease component JCP88_RS07810 IPR020449 Transcription regulator HTH, AraC- type JCP88_RS07810 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS07810 IPR037923 Transcription regulator HTH-like JCP88_RS07810 IPR003313 AraC-type arabinose-binding/dimerisation domain JCP88_RS07810 IPR009057 Homeobox-like domain superfamily JCP88_RS07810 IPR018062 HTH domain AraC-type, conserved site JCP88_RS07815 IPR022383 Lactate/malate dehydrogenase, C-terminal JCP88_RS07815 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JCP88_RS07815 IPR001557 L-lactate/malate dehydrogenase JCP88_RS07815 IPR001236 Lactate/malate dehydrogenase, N-terminal JCP88_RS07815 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07815 IPR011304 L-lactate dehydrogenase JCP88_RS07815 IPR018177 L-lactate dehydrogenase, active site JCP88_RS07835 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JCP88_RS07835 IPR000380 DNA topoisomerase, type IA JCP88_RS07835 IPR003601 DNA topoisomerase, type IA, domain 2 JCP88_RS07835 IPR023406 DNA topoisomerase, type IA, active site JCP88_RS07835 IPR006171 TOPRIM domain JCP88_RS07835 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JCP88_RS07835 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JCP88_RS07835 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JCP88_RS07835 IPR005738 DNA topoisomerase III JCP88_RS07835 IPR023405 DNA topoisomerase, type IA, core domain JCP88_RS07835 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JCP88_RS07835 IPR013497 DNA topoisomerase, type IA, central JCP88_RS07845 IPR004474 Cell envelope-related transcriptional attenuator domain JCP88_RS07850 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal JCP88_RS07850 IPR022893 Shikimate dehydrogenase family JCP88_RS07850 IPR036291 NAD(P)-binding domain superfamily JCP88_RS07850 IPR041121 SDH, C-terminal JCP88_RS07850 IPR011342 Shikimate dehydrogenase JCP88_RS07855 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 JCP88_RS07855 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS07855 IPR003593 AAA+ ATPase domain JCP88_RS07855 IPR003439 ABC transporter-like JCP88_RS07855 IPR017871 ABC transporter, conserved site JCP88_RS07855 IPR015856 ABC transporter, CbiO/EcfA subunit JCP88_RS07860 IPR001851 ABC transporter, permease JCP88_RS07875 IPR008532 NFACT, RNA-binding domain JCP88_RS07880 IPR000847 Transcription regulator HTH, LysR JCP88_RS07880 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS07880 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain JCP88_RS07880 IPR005119 LysR, substrate-binding JCP88_RS07880 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS07905 IPR005720 Dihydroorotate dehydrogenase domain JCP88_RS07905 IPR024920 Dihydroorotate dehydrogenase, class 1 JCP88_RS07905 IPR001295 Dihydroorotate dehydrogenase, conserved site JCP88_RS07905 IPR013785 Aldolase-type TIM barrel JCP88_RS07905 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 JCP88_RS07905 IPR033888 Dihydroorotate dehydrogenase, class 1B JCP88_RS07910 IPR017927 FAD-binding domain, ferredoxin reductase-type JCP88_RS07910 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit JCP88_RS07910 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily JCP88_RS07910 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain JCP88_RS07910 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit JCP88_RS07910 IPR017938 Riboflavin synthase-like beta-barrel JCP88_RS07910 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JCP88_RS07910 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain JCP88_RS07915 IPR036914 Methylglyoxal synthase-like domain superfamily JCP88_RS07915 IPR011607 Methylglyoxal synthase-like domain JCP88_RS07915 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain JCP88_RS07915 IPR006275 Carbamoyl-phosphate synthase, large subunit JCP88_RS07915 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JCP88_RS07915 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain JCP88_RS07915 IPR011761 ATP-grasp fold JCP88_RS07915 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily JCP88_RS07915 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain JCP88_RS07915 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS07920 IPR029062 Class I glutamine amidotransferase-like JCP88_RS07920 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain JCP88_RS07920 IPR017926 Glutamine amidotransferase JCP88_RS07920 IPR006274 Carbamoyl-phosphate synthase, small subunit JCP88_RS07920 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily JCP88_RS07920 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain JCP88_RS07925 IPR032466 Metal-dependent hydrolase JCP88_RS07925 IPR011059 Metal-dependent hydrolase, composite domain superfamily JCP88_RS07925 IPR006680 Amidohydrolase-related JCP88_RS07925 IPR004722 Dihydroorotase JCP88_RS07925 IPR002195 Dihydroorotase, conserved site JCP88_RS07930 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JCP88_RS07930 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily JCP88_RS07930 IPR006130 Aspartate/ornithine carbamoyltransferase JCP88_RS07930 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JCP88_RS07930 IPR002082 Aspartate carbamoyltransferase JCP88_RS07935 IPR006042 Xanthine/uracil permease JCP88_RS07935 IPR029935 Uracil permease JCP88_RS07935 IPR006043 Xanthine/uracil/vitamin C permease JCP88_RS07940 IPR023050 Bifunctional protein PyrR JCP88_RS07940 IPR029057 Phosphoribosyltransferase-like JCP88_RS07940 IPR000836 Phosphoribosyltransferase domain JCP88_RS07945 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS07945 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JCP88_RS07945 IPR002942 RNA-binding S4 domain JCP88_RS07945 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS07945 IPR036986 RNA-binding S4 domain superfamily JCP88_RS07945 IPR006225 Pseudouridine synthase, RluC/RluD JCP88_RS07950 IPR001872 Peptidase A8, signal peptidase II JCP88_RS07965 IPR000559 Formate-tetrahydrofolate ligase, FTHFS JCP88_RS07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS07965 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site JCP88_RS07970 IPR012156 Cold shock, CspA JCP88_RS07970 IPR011129 Cold shock domain JCP88_RS07970 IPR019844 Cold-shock (CSD) domain JCP88_RS07970 IPR002059 Cold-shock protein, DNA-binding JCP88_RS07970 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS07975 IPR020215 EbsA-like JCP88_RS07980 IPR002156 Ribonuclease H domain JCP88_RS07980 IPR012337 Ribonuclease H-like superfamily JCP88_RS07980 IPR036397 Ribonuclease H superfamily JCP88_RS07990 IPR024529 ECF transporter, substrate-specific component JCP88_RS07995 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain JCP88_RS07995 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily JCP88_RS07995 IPR002318 Alanine-tRNA ligase, class IIc JCP88_RS07995 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JCP88_RS07995 IPR003156 DHHA1 domain JCP88_RS07995 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JCP88_RS07995 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS07995 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JCP88_RS07995 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JCP88_RS08000 IPR000182 GNAT domain JCP88_RS08000 IPR039143 Glucosamine 6-phosphate N-acetyltransferase JCP88_RS08000 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS08005 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS08005 IPR014014 RNA helicase, DEAD-box type, Q motif JCP88_RS08005 IPR001650 Helicase, C-terminal JCP88_RS08005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08005 IPR030881 DEAD-box ATP-dependent RNA helicase CshB JCP88_RS08005 IPR011545 DEAD/DEAH box helicase domain JCP88_RS08020 IPR002293 Amino acid/polyamine transporter I JCP88_RS08025 IPR001509 NAD-dependent epimerase/dehydratase JCP88_RS08025 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS08030 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS08030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS08030 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JCP88_RS08030 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type JCP88_RS08030 IPR004839 Aminotransferase, class I/classII JCP88_RS08035 IPR003607 HD/PDEase domain JCP88_RS08035 IPR006674 HD domain JCP88_RS08040 IPR001333 Peptidase M32, carboxypeptidase Taq JCP88_RS08045 IPR000241 Putative RNA methylase domain JCP88_RS08045 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JCP88_RS08045 IPR004114 THUMP domain JCP88_RS08045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS08055 IPR011229 Cell cycle protein GpsB JCP88_RS08055 IPR007793 DivIVA family JCP88_RS08055 IPR019933 DivIVA domain JCP88_RS08060 IPR010697 YspA SLOG family JCP88_RS08065 IPR011856 tRNA endonuclease-like domain superfamily JCP88_RS08065 IPR011335 Restriction endonuclease type II-like JCP88_RS08065 IPR004612 Holliday junction resolvase RecU JCP88_RS08070 IPR036950 Penicillin binding protein transglycosylase domain JCP88_RS08070 IPR023346 Lysozyme-like domain superfamily JCP88_RS08070 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS08070 IPR001264 Glycosyl transferase, family 51 JCP88_RS08070 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS08080 IPR004035 Endonuclease III, iron-sulphur binding site JCP88_RS08080 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JCP88_RS08080 IPR000445 Helix-hairpin-helix motif JCP88_RS08080 IPR003265 HhH-GPD domain JCP88_RS08080 IPR004036 Endonuclease III-like, conserved site-2 JCP88_RS08080 IPR011257 DNA glycosylase JCP88_RS08080 IPR005759 Endonuclease III JCP88_RS08080 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JCP88_RS08085 IPR006343 DnaD domain JCP88_RS08085 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08085 IPR034829 DnaD-like domain superfamily JCP88_RS08090 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JCP88_RS08090 IPR011701 Major facilitator superfamily JCP88_RS08090 IPR036259 MFS transporter superfamily JCP88_RS08090 IPR020846 Major facilitator superfamily domain JCP88_RS08090 IPR005829 Sugar transporter, conserved site JCP88_RS08095 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08095 IPR023187 Transcriptional regulator MarR-type, conserved site JCP88_RS08095 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08095 IPR000835 MarR-type HTH domain JCP88_RS08105 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS08105 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS08105 IPR023753 FAD/NAD(P)-binding domain JCP88_RS08105 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS08110 IPR002481 Ferric-uptake regulator JCP88_RS08110 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08110 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08115 IPR001926 Pyridoxal-phosphate dependent enzyme JCP88_RS08115 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JCP88_RS08115 IPR005856 Cysteine synthase JCP88_RS08115 IPR005859 Cysteine synthase CysK JCP88_RS08115 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JCP88_RS08120 IPR036779 LysM domain superfamily JCP88_RS08120 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS08120 IPR018392 LysM domain JCP88_RS08130 IPR005475 Transketolase-like, pyrimidine-binding domain JCP88_RS08130 IPR033248 Transketolase, C-terminal domain JCP88_RS08130 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JCP88_RS08130 IPR005478 Transketolase, bacterial-like JCP88_RS08130 IPR020826 Transketolase binding site JCP88_RS08130 IPR033247 Transketolase family JCP88_RS08130 IPR005474 Transketolase, N-terminal JCP88_RS08130 IPR029061 Thiamin diphosphate-binding fold JCP88_RS08135 IPR009242 Protein of unknown function DUF896 JCP88_RS08140 IPR006199 LexA repressor, DNA-binding domain JCP88_RS08140 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08140 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08140 IPR015927 Peptidase S24/S26A/S26B/S26C JCP88_RS08140 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS08140 IPR006200 Transcription regulator LexA JCP88_RS08140 IPR039418 LexA-like JCP88_RS08140 IPR036286 LexA/Signal peptidase-like superfamily JCP88_RS08140 IPR006197 Peptidase S24, LexA-like JCP88_RS08150 IPR029057 Phosphoribosyltransferase-like JCP88_RS08150 IPR000836 Phosphoribosyltransferase domain JCP88_RS08150 IPR005764 Adenine phosphoribosyl transferase JCP88_RS08155 IPR001667 DDH domain JCP88_RS08155 IPR038763 DHH phosphoesterase superfamily JCP88_RS08155 IPR003156 DHHA1 domain JCP88_RS08155 IPR004610 Bacterial RecJ exonuclease JCP88_RS08155 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal JCP88_RS08155 IPR041122 RecJ, OB domain JCP88_RS08160 IPR010445 Lipopolysaccharide assembly protein A domain JCP88_RS08165 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS08165 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS08165 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08170 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS08170 IPR001279 Metallo-beta-lactamase JCP88_RS08170 IPR013471 Ribonuclease Z/BN JCP88_RS08180 IPR014100 GTP-binding protein Obg/CgtA JCP88_RS08180 IPR005225 Small GTP-binding protein domain JCP88_RS08180 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily JCP88_RS08180 IPR006074 GTP1/OBG, conserved site JCP88_RS08180 IPR006169 GTP1/OBG domain JCP88_RS08180 IPR036726 GTP1/OBG domain superfamily JCP88_RS08180 IPR031167 OBG-type guanine nucleotide-binding (G) domain JCP88_RS08180 IPR006073 GTP binding domain JCP88_RS08180 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08180 IPR015349 GTP-binding protein OBG, C-terminal JCP88_RS08185 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JCP88_RS08185 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JCP88_RS08185 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JCP88_RS08185 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08185 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JCP88_RS08205 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JCP88_RS08205 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JCP88_RS08205 IPR029000 Cyclophilin-like domain superfamily JCP88_RS08210 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JCP88_RS08210 IPR029069 HotDog domain superfamily JCP88_RS08210 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JCP88_RS08215 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) JCP88_RS08215 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS08215 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08220 IPR036038 Aminotransferase-like, PLP-dependent enzymes JCP88_RS08220 IPR001544 Aminotransferase class IV JCP88_RS08220 IPR033939 Branched-chain aminotransferase JCP88_RS08220 IPR005786 Branched-chain amino acid aminotransferase II JCP88_RS08220 IPR018300 Aminotransferase, class IV, conserved site JCP88_RS08225 IPR006685 Mechanosensitive ion channel MscS JCP88_RS08225 IPR010920 LSM domain superfamily JCP88_RS08225 IPR011066 Mechanosensitive ion channel MscS, C-terminal JCP88_RS08225 IPR023408 Mechanosensitive ion channel MscS domain superfamily JCP88_RS08225 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JCP88_RS08240 IPR036345 Exoribonuclease, PH domain 2 superfamily JCP88_RS08240 IPR001247 Exoribonuclease, phosphorolytic domain 1 JCP88_RS08240 IPR015847 Exoribonuclease, phosphorolytic domain 2 JCP88_RS08240 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS08240 IPR027408 PNPase/RNase PH domain superfamily JCP88_RS08240 IPR018336 Ribonuclease PH, conserved site JCP88_RS08240 IPR002381 Ribonuclease PH, bacterial-type JCP88_RS08245 IPR033134 Asp/Glu racemase, active site 2 JCP88_RS08245 IPR018187 Asp/Glu racemase, active site 1 JCP88_RS08245 IPR004391 Glutamate racemase JCP88_RS08245 IPR015942 Asp/Glu/hydantoin racemase JCP88_RS08245 IPR001920 Asp/Glu racemase JCP88_RS08250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS08250 IPR035906 MetI-like superfamily JCP88_RS08250 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS08255 IPR035906 MetI-like superfamily JCP88_RS08255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS08255 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JCP88_RS08260 IPR018313 Solute-binding protein family 3, conserved site JCP88_RS08260 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JCP88_RS08260 IPR001320 Ionotropic glutamate receptor JCP88_RS08265 IPR003593 AAA+ ATPase domain JCP88_RS08265 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JCP88_RS08265 IPR003439 ABC transporter-like JCP88_RS08265 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08265 IPR017871 ABC transporter, conserved site JCP88_RS08270 IPR002306 Tryptophan-tRNA ligase JCP88_RS08270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS08270 IPR002305 Aminoacyl-tRNA synthetase, class Ic JCP88_RS08270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS08270 IPR024109 Tryptophan-tRNA ligase, bacterial-type JCP88_RS08275 IPR005147 tRNA synthetase, B5-domain JCP88_RS08275 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain JCP88_RS08275 IPR002547 tRNA-binding domain JCP88_RS08275 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain JCP88_RS08275 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JCP88_RS08275 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit JCP88_RS08275 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS08275 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily JCP88_RS08275 IPR005121 Ferrodoxin-fold anticodon-binding domain JCP88_RS08275 IPR009061 Putative DNA-binding domain superfamily JCP88_RS08275 IPR005146 B3/B4 tRNA-binding domain JCP88_RS08280 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JCP88_RS08280 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS08280 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal JCP88_RS08280 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial JCP88_RS08280 IPR002319 Phenylalanyl-tRNA synthetase JCP88_RS08280 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit JCP88_RS08285 IPR002577 Helix-turn-helix, HxlR type JCP88_RS08285 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08285 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08285 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS08290 IPR011604 Exonuclease, phage-type/RecB, C-terminal JCP88_RS08290 IPR014152 DNA helicase subunit AddA JCP88_RS08290 IPR011335 Restriction endonuclease type II-like JCP88_RS08290 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS08290 IPR000212 DNA helicase, UvrD/REP type JCP88_RS08290 IPR034739 UvrD/AddA helicase, N-terminal JCP88_RS08290 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JCP88_RS08290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08290 IPR014017 UvrD-like DNA helicase, C-terminal JCP88_RS08295 IPR000212 DNA helicase, UvrD/REP type JCP88_RS08295 IPR014141 DNA helicase subunit RexB JCP88_RS08295 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08295 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JCP88_RS08305 IPR005279 Dipeptide/tripeptide permease JCP88_RS08305 IPR000109 Proton-dependent oligopeptide transporter family JCP88_RS08305 IPR020846 Major facilitator superfamily domain JCP88_RS08305 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site JCP88_RS08305 IPR036259 MFS transporter superfamily JCP88_RS08325 IPR016997 Uncharacterised conserved protein UCP032442 JCP88_RS08325 IPR039564 Peptidase C39-like JCP88_RS08325 IPR039563 Peptidase C39 single domain protein JCP88_RS08380 IPR036779 LysM domain superfamily JCP88_RS08380 IPR007921 CHAP domain JCP88_RS08380 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS08380 IPR018392 LysM domain JCP88_RS08385 IPR001584 Integrase, catalytic core JCP88_RS08385 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS08385 IPR012337 Ribonuclease H-like superfamily JCP88_RS08400 IPR002744 MIP18 family-like JCP88_RS08400 IPR034904 Fe-S cluster assembly domain superfamily JCP88_RS08405 IPR003740 Uncharacterised membrane protein YitT JCP88_RS08405 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS08405 IPR019264 Domain of unknown function DUF2179 JCP88_RS08410 IPR007551 Protein of unknown function DUF520 JCP88_RS08410 IPR035571 UPF0234-like, C-terminal JCP88_RS08410 IPR035570 UPF0234, N-terminal JCP88_RS08410 IPR036183 YajQ-like superfamily JCP88_RS08420 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS08420 IPR001279 Metallo-beta-lactamase JCP88_RS08430 IPR003824 Undecaprenyl-diphosphatase UppP JCP88_RS08435 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS08435 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS08435 IPR008250 P-type ATPase, A domain superfamily JCP88_RS08435 IPR036412 HAD-like superfamily JCP88_RS08435 IPR023214 HAD superfamily JCP88_RS08435 IPR027256 P-type ATPase, subfamily IB JCP88_RS08435 IPR001757 P-type ATPase JCP88_RS08435 IPR018303 P-type ATPase, phosphorylation site JCP88_RS08440 IPR007382 Uncharacterised protein family UPF0756, transmembrame JCP88_RS08450 IPR036510 Ribosomal protein S20 superfamily JCP88_RS08450 IPR002583 Ribosomal protein S20 JCP88_RS08455 IPR010372 DNA polymerase III delta, N-terminal JCP88_RS08455 IPR005790 DNA polymerase III, delta subunit JCP88_RS08455 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JCP88_RS08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08460 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS08460 IPR025405 Domain of unknown function DUF4131 JCP88_RS08460 IPR004797 Competence protein ComEC/Rec2 JCP88_RS08460 IPR004477 ComEC/Rec2-related protein JCP88_RS08460 IPR035681 ComA-like, MBL domain JCP88_RS08460 IPR001279 Metallo-beta-lactamase JCP88_RS08465 IPR016192 APOBEC/CMP deaminase, zinc-binding JCP88_RS08465 IPR002125 Cytidine and deoxycytidylate deaminase domain JCP88_RS08465 IPR035105 Deoxycytidylate deaminase domain JCP88_RS08465 IPR015517 Deoxycytidylate deaminase-related JCP88_RS08465 IPR016193 Cytidine deaminase-like JCP88_RS08465 IPR013404 Competence operon E, ComEB JCP88_RS08480 IPR004787 Competence protein ComEA JCP88_RS08480 IPR004509 Competence protein ComEA, helix-hairpin-helix domain JCP88_RS08480 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JCP88_RS08480 IPR010994 RuvA domain 2-like JCP88_RS08480 IPR019554 Soluble ligand binding domain JCP88_RS08485 IPR008269 Peptidase S16, Lon proteolytic domain JCP88_RS08485 IPR001478 PDZ domain JCP88_RS08485 IPR039381 Endopeptidase La, PDZ domain JCP88_RS08485 IPR036034 PDZ superfamily JCP88_RS08485 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS08485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS08485 IPR027065 Lon protease JCP88_RS08490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS08490 IPR001980 Phosphopantetheine adenylyltransferase JCP88_RS08490 IPR004821 Cytidyltransferase-like domain JCP88_RS08495 IPR004398 RNA methyltransferase, RsmD JCP88_RS08495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS08500 IPR016979 Protein of unknown function DUF2129 JCP88_RS08515 IPR011764 Biotin carboxylation domain JCP88_RS08515 IPR005481 Biotin carboxylase-like, N-terminal domain JCP88_RS08515 IPR011761 ATP-grasp fold JCP88_RS08515 IPR013785 Aldolase-type TIM barrel JCP88_RS08515 IPR005482 Biotin carboxylase, C-terminal JCP88_RS08515 IPR000089 Biotin/lipoyl attachment JCP88_RS08515 IPR000891 Pyruvate carboxyltransferase JCP88_RS08515 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JCP88_RS08515 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS08515 IPR005930 Pyruvate carboxylase JCP88_RS08515 IPR011054 Rudiment single hybrid motif JCP88_RS08515 IPR011053 Single hybrid motif JCP88_RS08515 IPR003379 Carboxylase, conserved domain JCP88_RS08520 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JCP88_RS08520 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JCP88_RS08525 IPR009983 Uncharacterised protein family UPF0358 JCP88_RS08525 IPR036270 UPF0358 superfamily JCP88_RS08530 IPR002121 HRDC domain JCP88_RS08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08530 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08530 IPR018982 RQC domain JCP88_RS08530 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08530 IPR010997 HRDC-like superfamily JCP88_RS08530 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JCP88_RS08530 IPR001650 Helicase, C-terminal JCP88_RS08530 IPR011545 DEAD/DEAH box helicase domain JCP88_RS08530 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial JCP88_RS08530 IPR004589 DNA helicase, ATP-dependent, RecQ type JCP88_RS08530 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS08535 IPR000640 Elongation factor EFG, domain V-like JCP88_RS08535 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS08535 IPR031157 Tr-type G domain, conserved site JCP88_RS08535 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08535 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS08535 IPR000795 Transcription factor, GTP-binding domain JCP88_RS08535 IPR005225 Small GTP-binding protein domain JCP88_RS08535 IPR035647 EF-G domain III/V-like JCP88_RS08535 IPR035651 BipA, domain V JCP88_RS08535 IPR006298 GTP-binding protein TypA JCP88_RS08535 IPR041095 Elongation Factor G, domain II JCP88_RS08535 IPR042116 GTP-binding protein TypA/BipA, C-terminal JCP88_RS08540 IPR020583 Inositol monophosphatase, metal-binding site JCP88_RS08540 IPR000760 Inositol monophosphatase-like JCP88_RS08540 IPR020550 Inositol monophosphatase, conserved site JCP88_RS08545 IPR023324 BH2638-like superfamily JCP88_RS08545 IPR007920 Protein of unknown function UPF0223 JCP88_RS08550 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS08550 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS08550 IPR023753 FAD/NAD(P)-binding domain JCP88_RS08550 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JCP88_RS08550 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS08550 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JCP88_RS08550 IPR006258 Dihydrolipoamide dehydrogenase JCP88_RS08555 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily JCP88_RS08555 IPR000089 Biotin/lipoyl attachment JCP88_RS08555 IPR004167 Peripheral subunit-binding domain JCP88_RS08555 IPR011053 Single hybrid motif JCP88_RS08555 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JCP88_RS08555 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JCP88_RS08555 IPR036625 E3-binding domain superfamily JCP88_RS08560 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JCP88_RS08560 IPR005475 Transketolase-like, pyrimidine-binding domain JCP88_RS08560 IPR033248 Transketolase, C-terminal domain JCP88_RS08560 IPR029061 Thiamin diphosphate-binding fold JCP88_RS08565 IPR029061 Thiamin diphosphate-binding fold JCP88_RS08565 IPR001017 Dehydrogenase, E1 component JCP88_RS08565 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha JCP88_RS08570 IPR004839 Aminotransferase, class I/classII JCP88_RS08570 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS08570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS08570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS08570 IPR000524 Transcription regulator HTH, GntR JCP88_RS08570 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08570 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08575 IPR001093 IMP dehydrogenase/GMP reductase JCP88_RS08575 IPR013785 Aldolase-type TIM barrel JCP88_RS08575 IPR005994 Guanosine monophosphate reductase, type2 JCP88_RS08575 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JCP88_RS08580 IPR001851 ABC transporter, permease JCP88_RS08585 IPR003439 ABC transporter-like JCP88_RS08585 IPR017871 ABC transporter, conserved site JCP88_RS08585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08585 IPR003593 AAA+ ATPase domain JCP88_RS08590 IPR025997 Periplasmic binding protein JCP88_RS08590 IPR028082 Periplasmic binding protein-like I JCP88_RS08600 IPR010559 Signal transduction histidine kinase, internal region JCP88_RS08600 IPR033479 Double Cache domain 1 JCP88_RS08600 IPR003660 HAMP domain JCP88_RS08600 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS08600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS08600 IPR005467 Histidine kinase domain JCP88_RS08600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS08605 IPR011006 CheY-like superfamily JCP88_RS08605 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS08605 IPR007492 LytTR DNA-binding domain JCP88_RS08610 IPR020471 Aldo/keto reductase JCP88_RS08610 IPR023210 NADP-dependent oxidoreductase domain JCP88_RS08610 IPR036812 NADP-dependent oxidoreductase domain superfamily JCP88_RS08615 IPR000115 Phosphoribosylglycinamide synthetase JCP88_RS08615 IPR011054 Rudiment single hybrid motif JCP88_RS08615 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal JCP88_RS08615 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCP88_RS08615 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS08615 IPR020560 Phosphoribosylglycinamide synthetase, C-domain JCP88_RS08615 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily JCP88_RS08615 IPR013815 ATP-grasp fold, subdomain 1 JCP88_RS08615 IPR011761 ATP-grasp fold JCP88_RS08615 IPR020559 Phosphoribosylglycinamide synthetase, conserved site JCP88_RS08620 IPR024051 AICAR transformylase, duplicated domain superfamily JCP88_RS08620 IPR002695 Bifunctional purine biosynthesis protein PurH-like JCP88_RS08620 IPR036914 Methylglyoxal synthase-like domain superfamily JCP88_RS08620 IPR016193 Cytidine deaminase-like JCP88_RS08620 IPR011607 Methylglyoxal synthase-like domain JCP88_RS08625 IPR002376 Formyl transferase, N-terminal JCP88_RS08625 IPR036477 Formyl transferase, N-terminal domain superfamily JCP88_RS08625 IPR004607 Phosphoribosylglycinamide formyltransferase JCP88_RS08625 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JCP88_RS08630 IPR010918 PurM-like, C-terminal domain JCP88_RS08630 IPR036921 PurM-like, N-terminal domain superfamily JCP88_RS08630 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase JCP88_RS08630 IPR036676 PurM-like, C-terminal domain superfamily JCP88_RS08630 IPR016188 PurM-like, N-terminal domain JCP88_RS08635 IPR005854 Amidophosphoribosyltransferase JCP88_RS08635 IPR029057 Phosphoribosyltransferase-like JCP88_RS08635 IPR000836 Phosphoribosyltransferase domain JCP88_RS08635 IPR017932 Glutamine amidotransferase type 2 domain JCP88_RS08635 IPR035584 Amidophosphoribosyltransferase, N-terminal JCP88_RS08635 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS08640 IPR010918 PurM-like, C-terminal domain JCP88_RS08640 IPR036921 PurM-like, N-terminal domain superfamily JCP88_RS08640 IPR016188 PurM-like, N-terminal domain JCP88_RS08640 IPR036676 PurM-like, C-terminal domain superfamily JCP88_RS08640 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain JCP88_RS08640 IPR010074 Phosphoribosylformylglycinamidine subunit PurL JCP88_RS08645 IPR017926 Glutamine amidotransferase JCP88_RS08645 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ JCP88_RS08645 IPR029062 Class I glutamine amidotransferase-like JCP88_RS08650 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily JCP88_RS08650 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS JCP88_RS08655 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase JCP88_RS08655 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase JCP88_RS08655 IPR018236 SAICAR synthetase, conserved site JCP88_RS08655 IPR028923 SAICAR synthetase/ADE2, N-terminal JCP88_RS08665 IPR004769 Adenylosuccinate lyase JCP88_RS08665 IPR019468 Adenylosuccinate lyase C-terminal JCP88_RS08665 IPR000362 Fumarate lyase family JCP88_RS08665 IPR024083 Fumarase/histidase, N-terminal JCP88_RS08665 IPR020557 Fumarate lyase, conserved site JCP88_RS08665 IPR022761 Fumarate lyase, N-terminal JCP88_RS08665 IPR008948 L-Aspartase-like JCP88_RS08670 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain JCP88_RS08670 IPR011761 ATP-grasp fold JCP88_RS08670 IPR011054 Rudiment single hybrid motif JCP88_RS08670 IPR013815 ATP-grasp fold, subdomain 1 JCP88_RS08670 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS08670 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit JCP88_RS08670 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JCP88_RS08675 IPR000031 PurE domain JCP88_RS08675 IPR024694 PurE, prokaryotic type JCP88_RS08675 IPR035893 PurE domain superfamily JCP88_RS08675 IPR033747 Class I PurE JCP88_RS08680 IPR017588 Uric acid permease UacT-like JCP88_RS08680 IPR006042 Xanthine/uracil permease JCP88_RS08680 IPR006043 Xanthine/uracil/vitamin C permease JCP88_RS08685 IPR029057 Phosphoribosyltransferase-like JCP88_RS08685 IPR010079 Xanthine phosphoribosyltransferase JCP88_RS08685 IPR000836 Phosphoribosyltransferase domain JCP88_RS08690 IPR000683 Oxidoreductase, N-terminal JCP88_RS08690 IPR004104 Oxidoreductase, C-terminal JCP88_RS08690 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08700 IPR035906 MetI-like superfamily JCP88_RS08700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS08705 IPR035906 MetI-like superfamily JCP88_RS08705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS08710 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS08720 IPR036779 LysM domain superfamily JCP88_RS08720 IPR018392 LysM domain JCP88_RS08720 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS08725 IPR003709 Peptidase M15B JCP88_RS08725 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JCP88_RS08735 IPR000683 Oxidoreductase, N-terminal JCP88_RS08735 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08735 IPR004104 Oxidoreductase, C-terminal JCP88_RS08750 IPR001107 Band 7 domain JCP88_RS08750 IPR036013 Band 7/SPFH domain superfamily JCP88_RS08750 IPR031905 Flotillin, C-terminal domain JCP88_RS08750 IPR027705 Flotillin family JCP88_RS08760 IPR013767 PAS fold JCP88_RS08760 IPR005467 Histidine kinase domain JCP88_RS08760 IPR000014 PAS domain JCP88_RS08760 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS08760 IPR033463 Single cache domain 3 JCP88_RS08760 IPR039506 SpoOB, alpha-helical domain JCP88_RS08760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS08760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS08760 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB JCP88_RS08760 IPR029151 Periplasmic sensor-like domain superfamily JCP88_RS08765 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS08765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS08765 IPR005467 Histidine kinase domain JCP88_RS08765 IPR000014 PAS domain JCP88_RS08765 IPR013767 PAS fold JCP88_RS08765 IPR033463 Single cache domain 3 JCP88_RS08765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS08765 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB JCP88_RS08765 IPR039506 SpoOB, alpha-helical domain JCP88_RS08765 IPR029151 Periplasmic sensor-like domain superfamily JCP88_RS08770 IPR011006 CheY-like superfamily JCP88_RS08770 IPR024187 Signal transduction response regulator, citrate/malate metabolism JCP88_RS08770 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS08775 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JCP88_RS08775 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JCP88_RS08775 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08775 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP88_RS08785 IPR032466 Metal-dependent hydrolase JCP88_RS08785 IPR011059 Metal-dependent hydrolase, composite domain superfamily JCP88_RS08785 IPR003764 N-acetylglucosamine-6-phosphate deacetylase JCP88_RS08785 IPR006680 Amidohydrolase-related JCP88_RS08795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS08795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS08795 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS08795 IPR004839 Aminotransferase, class I/classII JCP88_RS08845 IPR036779 LysM domain superfamily JCP88_RS08845 IPR018392 LysM domain JCP88_RS08845 IPR007921 CHAP domain JCP88_RS08845 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS08850 IPR001130 TatD family JCP88_RS08850 IPR015991 Uncharacterised hydrolase TatD-type JCP88_RS08850 IPR032466 Metal-dependent hydrolase JCP88_RS08850 IPR018228 Deoxyribonuclease, TatD-related, conserved site JCP88_RS08855 IPR003593 AAA+ ATPase domain JCP88_RS08855 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08855 IPR017871 ABC transporter, conserved site JCP88_RS08855 IPR003439 ABC transporter-like JCP88_RS08865 IPR035906 MetI-like superfamily JCP88_RS08865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS08870 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS08870 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JCP88_RS08870 IPR021179 Mercury(II) reductase JCP88_RS08870 IPR017969 Heavy-metal-associated, conserved site JCP88_RS08870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS08870 IPR023753 FAD/NAD(P)-binding domain JCP88_RS08870 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS08870 IPR006121 Heavy metal-associated domain, HMA JCP88_RS08870 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JCP88_RS08870 IPR036163 Heavy metal-associated domain superfamily JCP88_RS08875 IPR017871 ABC transporter, conserved site JCP88_RS08875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08875 IPR005892 Glycine betaine transport ATP-binding subunit JCP88_RS08875 IPR000644 CBS domain JCP88_RS08875 IPR003593 AAA+ ATPase domain JCP88_RS08875 IPR003439 ABC transporter-like JCP88_RS08880 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain JCP88_RS08890 IPR003740 Uncharacterised membrane protein YitT JCP88_RS08890 IPR019264 Domain of unknown function DUF2179 JCP88_RS08890 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS08900 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS08900 IPR028082 Periplasmic binding protein-like I JCP88_RS08900 IPR000843 LacI-type HTH domain JCP88_RS08905 IPR029058 Alpha/Beta hydrolase fold JCP88_RS08905 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain JCP88_RS08915 IPR022930 Protein of unknown function UPF0316 JCP88_RS08915 IPR019264 Domain of unknown function DUF2179 JCP88_RS08935 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable JCP88_RS08935 IPR038763 DHH phosphoesterase superfamily JCP88_RS08935 IPR004097 DHHA2 domain JCP88_RS08935 IPR038222 DHHA2 domain superfamily JCP88_RS08935 IPR001667 DDH domain JCP88_RS08940 IPR034465 Pyruvate formate-lyase activase JCP88_RS08940 IPR001989 Radical-activating enzyme, conserved site JCP88_RS08940 IPR034457 Organic radical-activating enzymes JCP88_RS08940 IPR013785 Aldolase-type TIM barrel JCP88_RS08940 IPR007197 Radical SAM JCP88_RS08940 IPR012838 Pyruvate formate-lyase 1 activating enzyme JCP88_RS08940 IPR012839 Organic radical enzyme activase JCP88_RS08945 IPR001150 Glycine radical domain JCP88_RS08945 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JCP88_RS08945 IPR005949 Formate acetyltransferase JCP88_RS08945 IPR004184 Pyruvate formate lyase domain JCP88_RS08950 IPR005741 DNA topoisomerase IV subunit A, Gram-positive JCP88_RS08950 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JCP88_RS08950 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JCP88_RS08950 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JCP88_RS08950 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JCP88_RS08950 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JCP88_RS08950 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JCP88_RS08955 IPR002288 DNA gyrase B subunit, C-terminal JCP88_RS08955 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS08955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS08955 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes JCP88_RS08955 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS08955 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS08955 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JCP88_RS08955 IPR001241 DNA topoisomerase, type IIA JCP88_RS08955 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JCP88_RS08955 IPR018522 DNA topoisomerase, type IIA, conserved site JCP88_RS08955 IPR006171 TOPRIM domain JCP88_RS08955 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JCP88_RS08960 IPR036291 NAD(P)-binding domain superfamily JCP88_RS08960 IPR003781 CoA-binding JCP88_RS08965 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY JCP88_RS08975 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS08975 IPR012337 Ribonuclease H-like superfamily JCP88_RS08975 IPR001584 Integrase, catalytic core JCP88_RS08985 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal JCP88_RS08985 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS08985 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS08985 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal JCP88_RS08985 IPR029016 GAF-like domain superfamily JCP88_RS08985 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY JCP88_RS08990 IPR003593 AAA+ ATPase domain JCP88_RS08990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS08990 IPR004491 Heat shock protein HslU JCP88_RS08990 IPR003959 ATPase, AAA-type, core JCP88_RS08990 IPR019489 Clp ATPase, C-terminal JCP88_RS08995 IPR023333 Proteasome B-type subunit JCP88_RS08995 IPR001353 Proteasome, subunit alpha/beta JCP88_RS08995 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS08995 IPR022281 ATP-dependent protease, HslV subunit JCP88_RS09000 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS09000 IPR023009 Tyrosine recombinase XerC/XerD JCP88_RS09000 IPR011931 Tyrosine recombinase XerC JCP88_RS09000 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS09000 IPR010998 Integrase/recombinase, N-terminal JCP88_RS09000 IPR002104 Integrase, catalytic domain JCP88_RS09000 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS09005 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related JCP88_RS09005 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO JCP88_RS09005 IPR020595 MnmG-related, conserved site JCP88_RS09005 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS09010 IPR000380 DNA topoisomerase, type IA JCP88_RS09010 IPR003601 DNA topoisomerase, type IA, domain 2 JCP88_RS09010 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JCP88_RS09010 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JCP88_RS09010 IPR023406 DNA topoisomerase, type IA, active site JCP88_RS09010 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JCP88_RS09010 IPR023405 DNA topoisomerase, type IA, core domain JCP88_RS09010 IPR034149 DNA topoisomerase 1, TOPRIM domain JCP88_RS09010 IPR013497 DNA topoisomerase, type IA, central JCP88_RS09010 IPR028612 DNA topoisomerase I, type IA JCP88_RS09010 IPR006171 TOPRIM domain JCP88_RS09010 IPR005733 DNA topoisomerase I, bacterial-type JCP88_RS09010 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JCP88_RS09010 IPR013498 DNA topoisomerase, type IA, zn finger JCP88_RS09015 IPR041104 DNA processing protein A, sterile alpha motif domain JCP88_RS09015 IPR003488 DNA recombination-mediator protein A JCP88_RS09020 IPR012337 Ribonuclease H-like superfamily JCP88_RS09020 IPR022898 Ribonuclease HII JCP88_RS09020 IPR024567 Ribonuclease HII/HIII domain JCP88_RS09020 IPR036397 Ribonuclease H superfamily JCP88_RS09020 IPR001352 Ribonuclease HII/HIII JCP88_RS09025 IPR019991 GTP-binding protein, ribosome biogenesis JCP88_RS09025 IPR016478 GTPase, MTG1 JCP88_RS09025 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily JCP88_RS09025 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JCP88_RS09025 IPR006073 GTP binding domain JCP88_RS09025 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09040 IPR019756 Peptidase S26A, signal peptidase I, serine active site JCP88_RS09040 IPR036286 LexA/Signal peptidase-like superfamily JCP88_RS09040 IPR000223 Peptidase S26A, signal peptidase I JCP88_RS09040 IPR019533 Peptidase S26 JCP88_RS09040 IPR019758 Peptidase S26A, signal peptidase I, conserved site JCP88_RS09040 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JCP88_RS09045 IPR036806 YozE SAM-like superfamily JCP88_RS09045 IPR023089 YozE SAM-like domain JCP88_RS09045 IPR010673 Protein of unknown function UPF0346 JCP88_RS09050 IPR002569 Peptide methionine sulphoxide reductase MsrA JCP88_RS09050 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JCP88_RS09055 IPR018672 Protein of unknown function DUF2140 JCP88_RS09060 IPR036514 SGNH hydrolase superfamily JCP88_RS09060 IPR013830 SGNH hydrolase-type esterase domain JCP88_RS09065 IPR003797 DegV JCP88_RS09070 IPR005744 Hly-III JCP88_RS09070 IPR004254 AdipoR/Haemolysin-III-related JCP88_RS09075 IPR001796 Dihydrofolate reductase domain JCP88_RS09075 IPR012259 Dihydrofolate reductase JCP88_RS09075 IPR017925 Dihydrofolate reductase conserved site JCP88_RS09075 IPR024072 Dihydrofolate reductase-like domain superfamily JCP88_RS09080 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily JCP88_RS09080 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain JCP88_RS09080 IPR020940 Thymidylate synthase, active site JCP88_RS09080 IPR000398 Thymidylate synthase JCP88_RS09085 IPR017871 ABC transporter, conserved site JCP88_RS09085 IPR003439 ABC transporter-like JCP88_RS09085 IPR032781 ABC-transporter extension domain JCP88_RS09085 IPR032524 ABC transporter Uup, C-terminal JCP88_RS09085 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JCP88_RS09085 IPR003593 AAA+ ATPase domain JCP88_RS09085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09090 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria JCP88_RS09090 IPR018422 Cation/H+ exchanger, CPA1 family JCP88_RS09090 IPR006153 Cation/H+ exchanger JCP88_RS09110 IPR023068 CCA-adding enzyme, firmicutes JCP88_RS09110 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JCP88_RS09110 IPR002646 Poly A polymerase, head domain JCP88_RS09110 IPR032810 CCA-adding enzyme, C-terminal JCP88_RS09115 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JCP88_RS09115 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD JCP88_RS09120 IPR003740 Uncharacterised membrane protein YitT JCP88_RS09120 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS09120 IPR019264 Domain of unknown function DUF2179 JCP88_RS09125 IPR027393 Virus scaffolding protein, C-terminal JCP88_RS09125 IPR011188 Uncharacterised protein family UPF0302 JCP88_RS09125 IPR014957 IDEAL domain JCP88_RS09125 IPR014963 Uncharacterised domain UPF0302, N-terminal JCP88_RS09125 IPR038091 UPF0302, N-terminal domain superfamily JCP88_RS09130 IPR019734 Tetratricopeptide repeat JCP88_RS09130 IPR013026 Tetratricopeptide repeat-containing domain JCP88_RS09130 IPR011990 Tetratricopeptide-like helical domain superfamily JCP88_RS09145 IPR000119 Histone-like DNA-binding protein JCP88_RS09145 IPR020816 Histone-like DNA-binding protein, conserved site JCP88_RS09145 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JCP88_RS09150 IPR031166 EngA-type guanine nucleotide-binding (G) domain JCP88_RS09150 IPR032859 GTPase Der, C-terminal KH-domain-like JCP88_RS09150 IPR015946 K homology domain-like, alpha/beta JCP88_RS09150 IPR016484 GTP-binding protein EngA JCP88_RS09150 IPR006073 GTP binding domain JCP88_RS09150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09150 IPR005225 Small GTP-binding protein domain JCP88_RS09155 IPR003029 S1 domain JCP88_RS09155 IPR022967 RNA-binding domain, S1 JCP88_RS09155 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS09160 IPR003136 Cytidylate kinase JCP88_RS09160 IPR011994 Cytidylate kinase domain JCP88_RS09160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09170 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09170 IPR004589 DNA helicase, ATP-dependent, RecQ type JCP88_RS09170 IPR011545 DEAD/DEAH box helicase domain JCP88_RS09170 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JCP88_RS09170 IPR001650 Helicase, C-terminal JCP88_RS09170 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS09180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JCP88_RS09180 IPR001080 3Fe-4S ferredoxin JCP88_RS09195 IPR002933 Peptidase M20 JCP88_RS09195 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS09195 IPR010964 Peptidase M20A, peptidase V-related JCP88_RS09200 IPR018385 C4-dicarboxylate anaerobic carrier-like JCP88_RS09205 IPR025720 ECF transporter, Riboflavin transporter RibU JCP88_RS09205 IPR024529 ECF transporter, substrate-specific component JCP88_RS09210 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JCP88_RS09210 IPR002942 RNA-binding S4 domain JCP88_RS09210 IPR036986 RNA-binding S4 domain superfamily JCP88_RS09210 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JCP88_RS09210 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS09210 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS09210 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JCP88_RS09215 IPR005234 Chromosome segregation/condensation protein ScpB JCP88_RS09215 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09215 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09220 IPR003768 Segregation and condensation protein A JCP88_RS09230 IPR002104 Integrase, catalytic domain JCP88_RS09230 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS09230 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS09230 IPR011932 Tyrosine recombinase XerD JCP88_RS09230 IPR023009 Tyrosine recombinase XerC/XerD JCP88_RS09230 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS09230 IPR010998 Integrase/recombinase, N-terminal JCP88_RS09240 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09240 IPR002481 Ferric-uptake regulator JCP88_RS09240 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09245 IPR014464 Conserved virulence factor B JCP88_RS09245 IPR040764 Conserved virulence factor B-like, winged helix domain JCP88_RS09245 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS09245 IPR022967 RNA-binding domain, S1 JCP88_RS09245 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09245 IPR039566 Conserved virulence factor B, S1 domain JCP88_RS09245 IPR003029 S1 domain JCP88_RS09250 IPR041295 MapZ, extracellular domain 1 JCP88_RS09250 IPR030858 Mid-cell-anchored protein Z JCP88_RS09250 IPR040532 MapZ, extracellular C-terminal domain 2 JCP88_RS09255 IPR012760 RNA polymerase sigma factor RpoD, C-terminal JCP88_RS09255 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09255 IPR007624 RNA polymerase sigma-70 region 3 JCP88_RS09255 IPR007627 RNA polymerase sigma-70 region 2 JCP88_RS09255 IPR013325 RNA polymerase sigma factor, region 2 JCP88_RS09255 IPR028630 RNA polymerase sigma factor RpoD JCP88_RS09255 IPR013324 RNA polymerase sigma factor, region 3/4-like JCP88_RS09255 IPR000943 RNA polymerase sigma-70 JCP88_RS09255 IPR007630 RNA polymerase sigma-70 region 4 JCP88_RS09255 IPR007127 RNA polymerase sigma factor 70, region 1.1 JCP88_RS09255 IPR014284 RNA polymerase sigma-70 like domain JCP88_RS09255 IPR009042 RNA polymerase sigma-70 region 1.2 JCP88_RS09255 IPR042189 Sigma-70 factor, region 1.1 superfamily JCP88_RS09260 IPR030846 DNA primase DnaG, bacteria JCP88_RS09260 IPR036977 DNA Primase, CHC2-type zinc finger JCP88_RS09260 IPR006295 DNA primase, DnaG JCP88_RS09260 IPR002694 Zinc finger, CHC2-type JCP88_RS09260 IPR006171 TOPRIM domain JCP88_RS09260 IPR034151 Bacterial DnaG primase, TOPRIM domain JCP88_RS09260 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JCP88_RS09260 IPR013264 DNA primase, catalytic core, N-terminal JCP88_RS09260 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JCP88_RS09260 IPR019475 DNA primase, DnaB-helicase binding domain JCP88_RS09265 IPR001757 P-type ATPase JCP88_RS09265 IPR023214 HAD superfamily JCP88_RS09265 IPR036412 HAD-like superfamily JCP88_RS09265 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS09265 IPR008250 P-type ATPase, A domain superfamily JCP88_RS09265 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS09265 IPR018303 P-type ATPase, phosphorylation site JCP88_RS09275 IPR023346 Lysozyme-like domain superfamily JCP88_RS09280 IPR000073 Alpha/beta hydrolase fold-1 JCP88_RS09280 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase JCP88_RS09280 IPR029058 Alpha/Beta hydrolase fold JCP88_RS09285 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JCP88_RS09285 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal JCP88_RS09285 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS09290 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS09290 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain JCP88_RS09290 IPR033720 Elongation factor Tu, domain 2 JCP88_RS09290 IPR000795 Transcription factor, GTP-binding domain JCP88_RS09290 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JCP88_RS09290 IPR031157 Tr-type G domain, conserved site JCP88_RS09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09290 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JCP88_RS09290 IPR005225 Small GTP-binding protein domain JCP88_RS09290 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS09290 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JCP88_RS09305 IPR018170 Aldo/keto reductase, conserved site JCP88_RS09305 IPR020471 Aldo/keto reductase JCP88_RS09305 IPR023210 NADP-dependent oxidoreductase domain JCP88_RS09305 IPR036812 NADP-dependent oxidoreductase domain superfamily JCP88_RS09320 IPR020616 Thiolase, N-terminal JCP88_RS09320 IPR002155 Thiolase JCP88_RS09320 IPR020613 Thiolase, conserved site JCP88_RS09320 IPR020617 Thiolase, C-terminal JCP88_RS09320 IPR016039 Thiolase-like JCP88_RS09320 IPR020615 Thiolase, acyl-enzyme intermediate active site JCP88_RS09325 IPR016039 Thiolase-like JCP88_RS09325 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic JCP88_RS09325 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal JCP88_RS09325 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain JCP88_RS09335 IPR036412 HAD-like superfamily JCP88_RS09335 IPR004014 Cation-transporting P-type ATPase, N-terminal JCP88_RS09335 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS09335 IPR023214 HAD superfamily JCP88_RS09335 IPR001757 P-type ATPase JCP88_RS09335 IPR008250 P-type ATPase, A domain superfamily JCP88_RS09335 IPR006068 Cation-transporting P-type ATPase, C-terminal JCP88_RS09335 IPR018303 P-type ATPase, phosphorylation site JCP88_RS09335 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS09340 IPR030874 Cardiolipin synthase, Firmicutes-type JCP88_RS09340 IPR001736 Phospholipase D/Transphosphatidylase JCP88_RS09340 IPR022924 Cardiolipin synthase JCP88_RS09340 IPR027379 Cardiolipin synthase N-terminal JCP88_RS09340 IPR025202 Phospholipase D-like domain JCP88_RS09345 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JCP88_RS09345 IPR029056 Ribokinase-like JCP88_RS09345 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase JCP88_RS09355 IPR023731 Regulatory protein Spx JCP88_RS09355 IPR006660 Arsenate reductase-like JCP88_RS09355 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS09355 IPR036249 Thioredoxin-like superfamily JCP88_RS09365 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09365 IPR005149 Transcription regulator PadR, N-terminal JCP88_RS09365 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09375 IPR006016 UspA JCP88_RS09375 IPR006015 Universal stress protein A family JCP88_RS09375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS09380 IPR017853 Glycoside hydrolase superfamily JCP88_RS09380 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS09380 IPR001360 Glycoside hydrolase family 1 JCP88_RS09385 IPR003352 Phosphotransferase system, EIIC JCP88_RS09385 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS09385 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS09390 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09390 IPR011663 UbiC transcription regulator-associated JCP88_RS09390 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS09390 IPR000524 Transcription regulator HTH, GntR JCP88_RS09390 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09395 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JCP88_RS09395 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JCP88_RS09395 IPR037523 Vicinal oxygen chelate (VOC) domain JCP88_RS09400 IPR002925 Dienelactone hydrolase JCP88_RS09400 IPR029058 Alpha/Beta hydrolase fold JCP88_RS09415 IPR013853 Galactitol permease IIC component JCP88_RS09415 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS09415 IPR004703 Phosphotransferase system, sugar-specific permease component JCP88_RS09435 IPR011608 PRD domain JCP88_RS09435 IPR013196 Helix-turn-helix, type 11 JCP88_RS09435 IPR007737 Mga helix-turn-helix domain JCP88_RS09435 IPR036634 PRD domain superfamily JCP88_RS09435 IPR016152 Phosphotransferase/anion transporter JCP88_RS09435 IPR002178 PTS EIIA type-2 domain JCP88_RS09435 IPR036095 PTS system IIB component-like superfamily JCP88_RS09435 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS09435 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS09435 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09435 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09455 IPR000182 GNAT domain JCP88_RS09455 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS09455 IPR006464 N-acetyltransferase RimI/Ard1 JCP88_RS09460 IPR001303 Class II aldolase/adducin N-terminal JCP88_RS09460 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JCP88_RS09460 IPR004661 L-ribulose-5-phosphate 4-epimerase JCP88_RS09465 IPR001719 AP endonuclease 2 JCP88_RS09465 IPR004560 L-ribulose-5-phosphate 3-epimerase JCP88_RS09465 IPR036237 Xylose isomerase-like superfamily JCP88_RS09465 IPR013022 Xylose isomerase-like, TIM barrel domain JCP88_RS09470 IPR013785 Aldolase-type TIM barrel JCP88_RS09470 IPR041710 HPS/KGPDC domain JCP88_RS09470 IPR011060 Ribulose-phosphate binding barrel JCP88_RS09470 IPR001754 Orotidine 5'-phosphate decarboxylase domain JCP88_RS09480 IPR004703 Phosphotransferase system, sugar-specific permease component JCP88_RS09485 IPR016152 Phosphotransferase/anion transporter JCP88_RS09485 IPR002178 PTS EIIA type-2 domain JCP88_RS09490 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JCP88_RS09490 IPR023951 L-ascorbate-6-phosphate lactonase UlaG JCP88_RS09495 IPR001034 DeoR-type HTH domain JCP88_RS09495 IPR014036 DeoR C-terminal sensor domain JCP88_RS09495 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS09495 IPR037171 NagB/RpiA transferase-like JCP88_RS09495 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JCP88_RS09495 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09495 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09515 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS09515 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS09515 IPR003352 Phosphotransferase system, EIIC JCP88_RS09520 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS09520 IPR011055 Duplicated hybrid motif JCP88_RS09520 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS09520 IPR036878 Glucose permease domain IIB JCP88_RS09520 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS09520 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS09520 IPR011300 Phosphotransferase system, IIBC component JCP88_RS09520 IPR003352 Phosphotransferase system, EIIC JCP88_RS09525 IPR022616 Glycosyl hydrolase, family 4, C-terminal JCP88_RS09525 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JCP88_RS09525 IPR001088 Glycoside hydrolase, family 4 JCP88_RS09525 IPR036291 NAD(P)-binding domain superfamily JCP88_RS09525 IPR019802 Glycoside hydrolase, family 4, conserved site JCP88_RS09530 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS09530 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component JCP88_RS09530 IPR003352 Phosphotransferase system, EIIC JCP88_RS09530 IPR011055 Duplicated hybrid motif JCP88_RS09530 IPR036878 Glucose permease domain IIB JCP88_RS09530 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS09530 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS09530 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS09535 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria JCP88_RS09535 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JCP88_RS09535 IPR006879 Carbohydrate deacetylase YdjC-like JCP88_RS09540 IPR004341 CAT RNA-binding domain JCP88_RS09540 IPR001550 Transcription antiterminator, conserved site JCP88_RS09540 IPR036634 PRD domain superfamily JCP88_RS09540 IPR011608 PRD domain JCP88_RS09540 IPR036650 CAT RNA-binding domain superfamily JCP88_RS09640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS09640 IPR005467 Histidine kinase domain JCP88_RS09640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS09640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS09640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS09640 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS09640 IPR041610 ArlS, sensor domain JCP88_RS09640 IPR003660 HAMP domain JCP88_RS09645 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS09645 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09645 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS09645 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS09645 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS09645 IPR011006 CheY-like superfamily JCP88_RS09650 IPR006183 6-phosphogluconate dehydrogenase JCP88_RS09650 IPR006184 6-phosphogluconate-binding site JCP88_RS09650 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JCP88_RS09650 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating JCP88_RS09650 IPR006114 6-phosphogluconate dehydrogenase, C-terminal JCP88_RS09650 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS09650 IPR036291 NAD(P)-binding domain superfamily JCP88_RS09650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS09660 IPR011332 Zinc-binding ribosomal protein JCP88_RS09660 IPR002677 Ribosomal protein L32p JCP88_RS09670 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09670 IPR000847 Transcription regulator HTH, LysR JCP88_RS09670 IPR005119 LysR, substrate-binding JCP88_RS09670 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09675 IPR015806 Pyruvate kinase, insert domain superfamily JCP88_RS09675 IPR036918 Pyruvate kinase, C-terminal domain superfamily JCP88_RS09675 IPR015793 Pyruvate kinase, barrel JCP88_RS09675 IPR011037 Pyruvate kinase-like, insert domain superfamily JCP88_RS09675 IPR040442 Pyruvate kinase-like domain superfamily JCP88_RS09675 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JCP88_RS09675 IPR001697 Pyruvate kinase JCP88_RS09675 IPR008279 PEP-utilising enzyme, mobile domain JCP88_RS09675 IPR015795 Pyruvate kinase, C-terminal JCP88_RS09680 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic JCP88_RS09680 IPR035966 Phosphofructokinase superfamily JCP88_RS09680 IPR000023 Phosphofructokinase domain JCP88_RS09680 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type JCP88_RS09680 IPR022953 ATP-dependent 6-phosphofructokinase JCP88_RS09685 IPR004805 DNA polymerase III, alpha subunit JCP88_RS09685 IPR016195 Polymerase/histidinol phosphatase-like JCP88_RS09685 IPR003141 Polymerase/histidinol phosphatase, N-terminal JCP88_RS09685 IPR004013 PHP domain JCP88_RS09685 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JCP88_RS09685 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JCP88_RS09685 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain JCP88_RS09685 IPR040982 DNA polymerase III alpha subunit finger domain JCP88_RS09685 IPR029460 DNA polymerase, helix-hairpin-helix motif JCP88_RS09695 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JCP88_RS09695 IPR036259 MFS transporter superfamily JCP88_RS09695 IPR011701 Major facilitator superfamily JCP88_RS09695 IPR020846 Major facilitator superfamily domain JCP88_RS09700 IPR026033 Azaguanine-like transporters JCP88_RS09700 IPR006043 Xanthine/uracil/vitamin C permease JCP88_RS09705 IPR023214 HAD superfamily JCP88_RS09705 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS09705 IPR036412 HAD-like superfamily JCP88_RS09705 IPR000150 Cof family JCP88_RS09710 IPR005311 Penicillin-binding protein, dimerisation domain JCP88_RS09710 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS09710 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS09710 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JCP88_RS09715 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09715 IPR009057 Homeobox-like domain superfamily JCP88_RS09715 IPR000281 Helix-turn-helix protein RpiR JCP88_RS09715 IPR035472 RpiR-like, SIS domain JCP88_RS09715 IPR001347 Sugar isomerase (SIS) JCP88_RS09720 IPR002320 Threonine-tRNA ligase, class IIa JCP88_RS09720 IPR012676 TGS-like JCP88_RS09720 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JCP88_RS09720 IPR012675 Beta-grasp domain superfamily JCP88_RS09720 IPR036621 Anticodon-binding domain superfamily JCP88_RS09720 IPR004154 Anticodon-binding JCP88_RS09720 IPR004095 TGS JCP88_RS09720 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JCP88_RS09720 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JCP88_RS09720 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS09720 IPR033728 Threonine-tRNA ligase catalytic core domain JCP88_RS09725 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type JCP88_RS09725 IPR014347 Tautomerase/MIF superfamily JCP88_RS09725 IPR004370 4-oxalocrotonate tautomerase JCP88_RS09730 IPR027256 P-type ATPase, subfamily IB JCP88_RS09730 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS09730 IPR018303 P-type ATPase, phosphorylation site JCP88_RS09730 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS09730 IPR008250 P-type ATPase, A domain superfamily JCP88_RS09730 IPR023214 HAD superfamily JCP88_RS09730 IPR017969 Heavy-metal-associated, conserved site JCP88_RS09730 IPR006122 Heavy metal-associated domain, copper ion-binding JCP88_RS09730 IPR036163 Heavy metal-associated domain superfamily JCP88_RS09730 IPR001757 P-type ATPase JCP88_RS09730 IPR036412 HAD-like superfamily JCP88_RS09730 IPR006121 Heavy metal-associated domain, HMA JCP88_RS09735 IPR027785 UvrD-like helicase C-terminal domain JCP88_RS09735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09735 IPR000212 DNA helicase, UvrD/REP type JCP88_RS09735 IPR014016 UvrD-like helicase, ATP-binding domain JCP88_RS09745 IPR002876 Transcriptional regulator TACO1-like JCP88_RS09745 IPR026564 Transcriptional regulator TACO1-like, domain 3 JCP88_RS09745 IPR026562 Probable transcriptional regulatory protein YeeN JCP88_RS09745 IPR029072 YebC-like JCP88_RS09745 IPR017856 Integrase-like, N-terminal JCP88_RS09750 IPR008513 tRNA(Met) cytidine acetate ligase JCP88_RS09750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS09755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS09755 IPR041698 Methyltransferase domain 25 JCP88_RS09760 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JCP88_RS09765 IPR005249 Conserved hypothetical protein CHP00488 JCP88_RS09765 IPR003607 HD/PDEase domain JCP88_RS09765 IPR006674 HD domain JCP88_RS09770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS09770 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase JCP88_RS09770 IPR004821 Cytidyltransferase-like domain JCP88_RS09775 IPR001890 RNA-binding, CRM domain JCP88_RS09775 IPR035920 YhbY-like superfamily JCP88_RS09775 IPR017924 RNA-binding protein YhbY JCP88_RS09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09780 IPR006073 GTP binding domain JCP88_RS09780 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH JCP88_RS09780 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JCP88_RS09785 IPR036412 HAD-like superfamily JCP88_RS09785 IPR006439 HAD hydrolase, subfamily IA JCP88_RS09785 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JCP88_RS09785 IPR023214 HAD superfamily JCP88_RS09785 IPR010021 HAD-superfamily phosphatase, YqeG-like JCP88_RS09790 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal JCP88_RS09790 IPR029045 ClpP/crotonase-like domain superfamily JCP88_RS09790 IPR001095 Acetyl-CoA carboxylase, alpha subunit JCP88_RS09795 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JCP88_RS09795 IPR029045 ClpP/crotonase-like domain superfamily JCP88_RS09795 IPR034733 Acetyl-CoA carboxylase JCP88_RS09795 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit JCP88_RS09800 IPR005481 Biotin carboxylase-like, N-terminal domain JCP88_RS09800 IPR011764 Biotin carboxylation domain JCP88_RS09800 IPR005482 Biotin carboxylase, C-terminal JCP88_RS09800 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JCP88_RS09800 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS09800 IPR011054 Rudiment single hybrid motif JCP88_RS09800 IPR011761 ATP-grasp fold JCP88_RS09800 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase JCP88_RS09805 IPR029069 HotDog domain superfamily JCP88_RS09805 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JCP88_RS09805 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JCP88_RS09810 IPR011053 Single hybrid motif JCP88_RS09810 IPR001249 Acetyl-CoA biotin carboxyl carrier JCP88_RS09810 IPR001882 Biotin-binding site JCP88_RS09810 IPR000089 Biotin/lipoyl attachment JCP88_RS09815 IPR000794 Beta-ketoacyl synthase JCP88_RS09815 IPR014030 Beta-ketoacyl synthase, N-terminal JCP88_RS09815 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JCP88_RS09815 IPR016039 Thiolase-like JCP88_RS09815 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JCP88_RS09815 IPR014031 Beta-ketoacyl synthase, C-terminal JCP88_RS09815 IPR018201 Beta-ketoacyl synthase, active site JCP88_RS09820 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS09820 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JCP88_RS09820 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS09820 IPR036291 NAD(P)-binding domain superfamily JCP88_RS09825 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type JCP88_RS09825 IPR024925 Malonyl CoA-acyl carrier protein transacylase JCP88_RS09825 IPR001227 Acyl transferase domain superfamily JCP88_RS09825 IPR014043 Acyl transferase JCP88_RS09825 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JCP88_RS09825 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JCP88_RS09830 IPR036736 ACP-like superfamily JCP88_RS09830 IPR009081 Phosphopantetheine binding ACP domain JCP88_RS09830 IPR003231 Acyl carrier protein (ACP) JCP88_RS09835 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal JCP88_RS09835 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 JCP88_RS09835 IPR016039 Thiolase-like JCP88_RS09835 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCP88_RS09840 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09840 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS09840 IPR000835 MarR-type HTH domain JCP88_RS09845 IPR038476 UvrC homology region 2 superfamily JCP88_RS09845 IPR001162 UvrC family homology region JCP88_RS09845 IPR004791 UvrABC system, subunit C JCP88_RS09845 IPR036876 UVR domain superfamily JCP88_RS09845 IPR001943 UVR domain JCP88_RS09845 IPR010994 RuvA domain 2-like JCP88_RS09845 IPR035901 GIY-YIG endonuclease superfamily JCP88_RS09845 IPR000305 GIY-YIG endonuclease JCP88_RS09850 IPR014904 Protein of unknown function DUF1797 JCP88_RS09850 IPR038073 YkuJ-like superfamily JCP88_RS09855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS09855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS09855 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JCP88_RS09855 IPR036291 NAD(P)-binding domain superfamily JCP88_RS09855 IPR015815 3-hydroxyisobutyrate dehydrogenase-related JCP88_RS09855 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JCP88_RS09855 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site JCP88_RS09860 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JCP88_RS09860 IPR001296 Glycosyl transferase, family 1 JCP88_RS09865 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JCP88_RS09865 IPR001296 Glycosyl transferase, family 1 JCP88_RS09875 IPR008731 Phosphotransferase system, enzyme I N-terminal JCP88_RS09875 IPR040442 Pyruvate kinase-like domain superfamily JCP88_RS09875 IPR008279 PEP-utilising enzyme, mobile domain JCP88_RS09875 IPR018274 PEP-utilising enzyme, active site JCP88_RS09875 IPR000121 PEP-utilising enzyme, C-terminal JCP88_RS09875 IPR023151 PEP-utilising enzyme, conserved site JCP88_RS09875 IPR036637 Phosphohistidine domain superfamily JCP88_RS09875 IPR024692 Phosphotransferase system, enzyme I JCP88_RS09875 IPR036618 PtsI, HPr-binding domain superfamily JCP88_RS09875 IPR006318 Phosphotransferase system, enzyme I-like JCP88_RS09875 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JCP88_RS09880 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JCP88_RS09880 IPR000032 Phosphocarrier protein HPr-like JCP88_RS09880 IPR035895 HPr-like superfamily JCP88_RS09880 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JCP88_RS09885 IPR028299 ClpA/B, conserved site 2 JCP88_RS09885 IPR018368 ClpA/B, conserved site 1 JCP88_RS09885 IPR001943 UVR domain JCP88_RS09885 IPR001270 ClpA/B family JCP88_RS09885 IPR019489 Clp ATPase, C-terminal JCP88_RS09885 IPR003959 ATPase, AAA-type, core JCP88_RS09885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09885 IPR003593 AAA+ ATPase domain JCP88_RS09885 IPR036876 UVR domain superfamily JCP88_RS09885 IPR041546 ClpA/ClpB, AAA lid domain JCP88_RS09905 IPR031157 Tr-type G domain, conserved site JCP88_RS09905 IPR004161 Translation elongation factor EFTu-like, domain 2 JCP88_RS09905 IPR035647 EF-G domain III/V-like JCP88_RS09905 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily JCP88_RS09905 IPR041732 Peptide chain release factor 3, GTP-binding domain JCP88_RS09905 IPR004548 Peptide chain release factor 3 JCP88_RS09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS09905 IPR032090 Peptide chain release factor 3, C-terminal JCP88_RS09905 IPR000795 Transcription factor, GTP-binding domain JCP88_RS09905 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS09905 IPR005225 Small GTP-binding protein domain JCP88_RS09910 IPR000644 CBS domain JCP88_RS09910 IPR002550 CNNM, transmembrane domain JCP88_RS09910 IPR036318 FAD-binding, type PCMH-like superfamily JCP88_RS09910 IPR005170 Transporter-associated domain JCP88_RS09910 IPR016169 FAD-binding, type PCMH, subdomain 2 JCP88_RS09915 IPR002549 Transmembrane protein TqsA-like JCP88_RS09920 IPR000182 GNAT domain JCP88_RS09920 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS09925 IPR016882 Uncharacterised protein family UPF0374 JCP88_RS09925 IPR035930 FomD-like superfamily JCP88_RS09925 IPR007295 Domain of unknown function DUF402 JCP88_RS09930 IPR029119 MutY, C-terminal JCP88_RS09930 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JCP88_RS09930 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JCP88_RS09930 IPR011257 DNA glycosylase JCP88_RS09930 IPR005760 A/G-specific adenine glycosylase MutY JCP88_RS09930 IPR015797 NUDIX hydrolase-like domain superfamily JCP88_RS09930 IPR003265 HhH-GPD domain JCP88_RS09935 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS09935 IPR003783 Regulatory protein RecX JCP88_RS09940 IPR002792 TRAM domain JCP88_RS09940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS09940 IPR030390 RNA methyltransferase TrmA, active site JCP88_RS09940 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS09940 IPR010280 (Uracil-5)-methyltransferase family JCP88_RS09945 IPR004302 Cellulose/chitin-binding protein, N-terminal JCP88_RS09945 IPR014756 Immunoglobulin E-set JCP88_RS09950 IPR004307 TspO/MBR-related protein JCP88_RS09950 IPR038330 TspO/MBR-related superfamily JCP88_RS09955 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU JCP88_RS09955 IPR004474 Cell envelope-related transcriptional attenuator domain JCP88_RS09965 IPR019844 Cold-shock (CSD) domain JCP88_RS09965 IPR011129 Cold shock domain JCP88_RS09965 IPR002059 Cold-shock protein, DNA-binding JCP88_RS09965 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS09965 IPR012156 Cold shock, CspA JCP88_RS09970 IPR019832 Manganese/iron superoxide dismutase, C-terminal JCP88_RS09970 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily JCP88_RS09970 IPR019831 Manganese/iron superoxide dismutase, N-terminal JCP88_RS09970 IPR001189 Manganese/iron superoxide dismutase JCP88_RS09970 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily JCP88_RS09970 IPR019833 Manganese/iron superoxide dismutase, binding site JCP88_RS09975 IPR007267 GtrA-like protein JCP88_RS09980 IPR036837 Cation efflux protein, cytoplasmic domain superfamily JCP88_RS09980 IPR002524 Cation efflux protein JCP88_RS09980 IPR027469 Cation efflux transmembrane domain superfamily JCP88_RS09990 IPR036291 NAD(P)-binding domain superfamily JCP88_RS09990 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JCP88_RS09990 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JCP88_RS10005 IPR003148 Regulator of K+ conductance, N-terminal JCP88_RS10005 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JCP88_RS10005 IPR006037 Regulator of K+ conductance, C-terminal JCP88_RS10005 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10010 IPR000792 Transcription regulator LuxR, C-terminal JCP88_RS10010 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS10010 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS10010 IPR011006 CheY-like superfamily JCP88_RS10015 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JCP88_RS10015 IPR005467 Histidine kinase domain JCP88_RS10015 IPR017202 Sensor histidine kinase LiaS/VraS JCP88_RS10015 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS10015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS10015 IPR003660 HAMP domain JCP88_RS10025 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JCP88_RS10025 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily JCP88_RS10025 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JCP88_RS10025 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JCP88_RS10025 IPR006359 Transcription elongation factor GreA JCP88_RS10025 IPR028624 Transcription elongation factor GreA/GreB JCP88_RS10025 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JCP88_RS10025 IPR023459 Transcription elongation factor GreA/GreB family JCP88_RS10030 IPR003770 Endolytic murein transglycosylase JCP88_RS10045 IPR001207 Transposase, mutator type JCP88_RS10085 IPR001584 Integrase, catalytic core JCP88_RS10085 IPR012337 Ribonuclease H-like superfamily JCP88_RS10085 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS10090 IPR001509 NAD-dependent epimerase/dehydratase JCP88_RS10090 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10095 IPR003329 Acylneuraminate cytidylyltransferase JCP88_RS10095 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS10110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS10110 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JCP88_RS10110 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS10120 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing JCP88_RS10120 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like JCP88_RS10120 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain JCP88_RS10125 IPR013132 N-acetylneuraminic acid synthase, N-terminal JCP88_RS10125 IPR020007 N-acetylneuraminate synthase JCP88_RS10125 IPR013785 Aldolase-type TIM barrel JCP88_RS10125 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily JCP88_RS10125 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal JCP88_RS10125 IPR013974 SAF domain JCP88_RS10130 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) JCP88_RS10130 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JCP88_RS10130 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10155 IPR001296 Glycosyl transferase, family 1 JCP88_RS10155 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JCP88_RS10160 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10160 IPR001173 Glycosyltransferase 2-like JCP88_RS10165 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JCP88_RS10165 IPR003362 Bacterial sugar transferase JCP88_RS10180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS10180 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10180 IPR001173 Glycosyltransferase 2-like JCP88_RS10185 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JCP88_RS10185 IPR011530 Ribosomal RNA adenine dimethylase JCP88_RS10185 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JCP88_RS10185 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JCP88_RS10185 IPR023165 rRNA adenine dimethylase-like JCP88_RS10185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS10190 IPR003646 SH3-like domain, bacterial-type JCP88_RS10190 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10190 IPR015860 ABC transporter, teichoic acids export, TagH JCP88_RS10190 IPR017871 ABC transporter, conserved site JCP88_RS10190 IPR003439 ABC transporter-like JCP88_RS10190 IPR003593 AAA+ ATPase domain JCP88_RS10195 IPR000412 ABC-2 transporter JCP88_RS10195 IPR013525 ABC-2 type transporter JCP88_RS10210 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10210 IPR029903 RmlD-like substrate binding domain JCP88_RS10210 IPR005913 dTDP-4-dehydrorhamnose reductase family JCP88_RS10215 IPR005888 dTDP-glucose 4,6-dehydratase JCP88_RS10215 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10215 IPR016040 NAD(P)-binding domain JCP88_RS10220 IPR011051 RmlC-like cupin domain superfamily JCP88_RS10220 IPR014710 RmlC-like jelly roll fold JCP88_RS10220 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related JCP88_RS10225 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form JCP88_RS10225 IPR005835 Nucleotidyl transferase domain JCP88_RS10225 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10230 IPR001173 Glycosyltransferase 2-like JCP88_RS10230 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10240 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10245 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JCP88_RS10245 IPR000715 Glycosyl transferase, family 4 JCP88_RS10250 IPR017039 Virulence factor BrkB JCP88_RS10255 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JCP88_RS10255 IPR036005 Creatinase/aminopeptidase-like JCP88_RS10255 IPR000994 Peptidase M24 JCP88_RS10255 IPR001714 Peptidase M24, methionine aminopeptidase JCP88_RS10260 IPR008254 Flavodoxin/nitric oxide synthase JCP88_RS10260 IPR029039 Flavoprotein-like superfamily JCP88_RS10260 IPR001226 Flavodoxin, conserved site JCP88_RS10260 IPR001094 Flavodoxin-like JCP88_RS10260 IPR010087 Flavodoxin, short chain JCP88_RS10270 IPR000787 Peptidase M29 JCP88_RS10270 IPR035097 Peptidase M29, N-terminal JCP88_RS10275 IPR001207 Transposase, mutator type JCP88_RS10290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10310 IPR024937 Domain X JCP88_RS10310 IPR000477 Reverse transcriptase domain JCP88_RS10320 IPR003491 Replication initiation factor JCP88_RS10320 IPR040819 Rolling Circle replication initiation protein, N-terminal JCP88_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10345 IPR002543 FtsK domain JCP88_RS10350 IPR000477 Reverse transcriptase domain JCP88_RS10355 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10355 IPR002543 FtsK domain JCP88_RS10385 IPR008991 Translation protein SH3-like domain superfamily JCP88_RS10385 IPR018257 Ribosomal protein L19, conserved site JCP88_RS10385 IPR001857 Ribosomal protein L19 JCP88_RS10385 IPR038657 Ribosomal protein L19 superfamily JCP88_RS10390 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain JCP88_RS10390 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS10390 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal JCP88_RS10390 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria JCP88_RS10390 IPR029028 Alpha/beta knot methyltransferases JCP88_RS10395 IPR036976 RimM, N-terminal domain superfamily JCP88_RS10395 IPR027275 PRC-barrel domain JCP88_RS10395 IPR011033 PRC-barrel-like superfamily JCP88_RS10395 IPR002676 RimM, N-terminal JCP88_RS10395 IPR009000 Translation protein, beta-barrel domain superfamily JCP88_RS10395 IPR011961 16S rRNA processing protein RimM JCP88_RS10405 IPR015946 K homology domain-like, alpha/beta JCP88_RS10405 IPR009019 K homology domain superfamily, prokaryotic type JCP88_RS10405 IPR020627 Uncharacterised protein family UPF0109 JCP88_RS10410 IPR000307 Ribosomal protein S16 JCP88_RS10410 IPR023803 Ribosomal protein S16 domain superfamily JCP88_RS10415 IPR029039 Flavoprotein-like superfamily JCP88_RS10415 IPR005025 NADPH-dependent FMN reductase-like JCP88_RS10420 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JCP88_RS10420 IPR024072 Dihydrofolate reductase-like domain superfamily JCP88_RS10425 IPR017926 Glutamine amidotransferase JCP88_RS10425 IPR025777 GMP synthetase ATP pyrophosphatase domain JCP88_RS10425 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS10425 IPR001674 GMP synthase, C-terminal JCP88_RS10425 IPR005019 Methyladenine glycosylase JCP88_RS10425 IPR000182 GNAT domain JCP88_RS10425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS10425 IPR029062 Class I glutamine amidotransferase-like JCP88_RS10425 IPR011257 DNA glycosylase JCP88_RS10430 IPR004780 Signal recognition particle protein JCP88_RS10430 IPR004125 Signal recognition particle, SRP54 subunit, M-domain JCP88_RS10430 IPR003593 AAA+ ATPase domain JCP88_RS10430 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10430 IPR022941 Signal recognition particle, SRP54 subunit JCP88_RS10430 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily JCP88_RS10430 IPR013822 Signal recognition particle SRP54, helical bundle JCP88_RS10430 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JCP88_RS10430 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JCP88_RS10435 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like JCP88_RS10435 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS10435 IPR013324 RNA polymerase sigma factor, region 3/4-like JCP88_RS10445 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS10445 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS10445 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS10445 IPR011006 CheY-like superfamily JCP88_RS10445 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS10445 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS10450 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS10450 IPR013767 PAS fold JCP88_RS10450 IPR031967 PhoR, single Cache-like domain JCP88_RS10450 IPR035965 PAS domain superfamily JCP88_RS10450 IPR000014 PAS domain JCP88_RS10450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS10450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS10450 IPR005467 Histidine kinase domain JCP88_RS10450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS10450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS10455 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS10455 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS10455 IPR018303 P-type ATPase, phosphorylation site JCP88_RS10455 IPR001757 P-type ATPase JCP88_RS10455 IPR008250 P-type ATPase, A domain superfamily JCP88_RS10455 IPR023214 HAD superfamily JCP88_RS10455 IPR036412 HAD-like superfamily JCP88_RS10460 IPR012337 Ribonuclease H-like superfamily JCP88_RS10460 IPR001584 Integrase, catalytic core JCP88_RS10460 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS10465 IPR011862 Phosphate binding protein JCP88_RS10465 IPR024370 PBP domain JCP88_RS10490 IPR029055 Nucleophile aminohydrolases, N-terminal JCP88_RS10490 IPR029132 Choloylglycine hydrolase/NAAA C-terminal JCP88_RS10550 IPR041628 ChlI/MoxR, AAA lid domain JCP88_RS10550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10550 IPR011703 ATPase, AAA-3 JCP88_RS10570 IPR018303 P-type ATPase, phosphorylation site JCP88_RS10570 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS10570 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS10570 IPR027256 P-type ATPase, subfamily IB JCP88_RS10570 IPR036412 HAD-like superfamily JCP88_RS10570 IPR023214 HAD superfamily JCP88_RS10570 IPR001757 P-type ATPase JCP88_RS10570 IPR008250 P-type ATPase, A domain superfamily JCP88_RS10575 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS10575 IPR036412 HAD-like superfamily JCP88_RS10575 IPR023214 HAD superfamily JCP88_RS10575 IPR017969 Heavy-metal-associated, conserved site JCP88_RS10575 IPR006121 Heavy metal-associated domain, HMA JCP88_RS10575 IPR001757 P-type ATPase JCP88_RS10575 IPR018303 P-type ATPase, phosphorylation site JCP88_RS10575 IPR027256 P-type ATPase, subfamily IB JCP88_RS10575 IPR008250 P-type ATPase, A domain superfamily JCP88_RS10575 IPR036163 Heavy metal-associated domain superfamily JCP88_RS10575 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS10580 IPR006122 Heavy metal-associated domain, copper ion-binding JCP88_RS10580 IPR006121 Heavy metal-associated domain, HMA JCP88_RS10580 IPR036163 Heavy metal-associated domain superfamily JCP88_RS10580 IPR017969 Heavy-metal-associated, conserved site JCP88_RS10585 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS10585 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS10585 IPR014071 Copper transport repressor CopY/TcrY JCP88_RS10585 IPR005650 BlaI transcriptional regulatory family JCP88_RS10595 IPR002293 Amino acid/polyamine transporter I JCP88_RS10600 IPR006121 Heavy metal-associated domain, HMA JCP88_RS10600 IPR036163 Heavy metal-associated domain superfamily JCP88_RS10600 IPR027256 P-type ATPase, subfamily IB JCP88_RS10600 IPR023214 HAD superfamily JCP88_RS10600 IPR023299 P-type ATPase, cytoplasmic domain N JCP88_RS10600 IPR008250 P-type ATPase, A domain superfamily JCP88_RS10600 IPR023298 P-type ATPase, transmembrane domain superfamily JCP88_RS10600 IPR018303 P-type ATPase, phosphorylation site JCP88_RS10600 IPR001757 P-type ATPase JCP88_RS10600 IPR017969 Heavy-metal-associated, conserved site JCP88_RS10600 IPR036412 HAD-like superfamily JCP88_RS10615 IPR036514 SGNH hydrolase superfamily JCP88_RS10615 IPR013830 SGNH hydrolase-type esterase domain JCP88_RS10620 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS10620 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JCP88_RS10620 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JCP88_RS10620 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS10620 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JCP88_RS10620 IPR004522 Asparagine-tRNA ligase JCP88_RS10625 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JCP88_RS10625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS10625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS10625 IPR004839 Aminotransferase, class I/classII JCP88_RS10625 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS10635 IPR006935 Helicase/UvrB, N-terminal JCP88_RS10635 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10635 IPR013520 Exonuclease, RNase T/DNA polymerase III JCP88_RS10635 IPR036397 Ribonuclease H superfamily JCP88_RS10635 IPR001650 Helicase, C-terminal JCP88_RS10635 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS10635 IPR012337 Ribonuclease H-like superfamily JCP88_RS10635 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type JCP88_RS10635 IPR006310 3'-5' exonuclease DinG JCP88_RS10635 IPR006555 ATP-dependent helicase, C-terminal JCP88_RS10635 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JCP88_RS10640 IPR002059 Cold-shock protein, DNA-binding JCP88_RS10640 IPR012156 Cold shock, CspA JCP88_RS10640 IPR019844 Cold-shock (CSD) domain JCP88_RS10640 IPR011129 Cold shock domain JCP88_RS10640 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS10660 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JCP88_RS10660 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS10660 IPR015956 Penicillin-binding protein, C-terminal domain superfamily JCP88_RS10660 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal JCP88_RS10660 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily JCP88_RS10660 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JCP88_RS10675 IPR001807 Chloride channel, voltage gated JCP88_RS10675 IPR014743 Chloride channel, core JCP88_RS10700 IPR001537 tRNA/rRNA methyltransferase, SpoU type JCP88_RS10700 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JCP88_RS10700 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS10700 IPR029028 Alpha/beta knot methyltransferases JCP88_RS10700 IPR029064 50S ribosomal protein L30e-like JCP88_RS10705 IPR036046 Acylphosphatase-like domain superfamily JCP88_RS10705 IPR001792 Acylphosphatase-like domain JCP88_RS10705 IPR017968 Acylphosphatase, conserved site JCP88_RS10705 IPR020456 Acylphosphatase JCP88_RS10715 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes JCP88_RS10715 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JCP88_RS10715 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 JCP88_RS10740 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JCP88_RS10740 IPR016066 Alpha-D-phosphohexomutase, conserved site JCP88_RS10740 IPR005841 Alpha-D-phosphohexomutase superfamily JCP88_RS10740 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JCP88_RS10740 IPR005843 Alpha-D-phosphohexomutase, C-terminal JCP88_RS10740 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JCP88_RS10740 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JCP88_RS10740 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JCP88_RS10770 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS10770 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS10770 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10775 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JCP88_RS10775 IPR029061 Thiamin diphosphate-binding fold JCP88_RS10775 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase JCP88_RS10805 IPR004515 Phosphoheptose isomerase JCP88_RS10805 IPR001347 Sugar isomerase (SIS) JCP88_RS10805 IPR035461 GmhA/DiaA JCP88_RS10810 IPR036412 HAD-like superfamily JCP88_RS10810 IPR006543 Histidinol-phosphate phosphatase JCP88_RS10810 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JCP88_RS10810 IPR023214 HAD superfamily JCP88_RS10810 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase JCP88_RS10815 IPR014606 D,D-heptose 7-phosphate kinase JCP88_RS10815 IPR001174 Galactokinase/homoserine kinase JCP88_RS10815 IPR006204 GHMP kinase N-terminal domain JCP88_RS10815 IPR036554 GHMP kinase, C-terminal domain superfamily JCP88_RS10815 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS10815 IPR013750 GHMP kinase, C-terminal domain JCP88_RS10825 IPR011051 RmlC-like cupin domain superfamily JCP88_RS10825 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase JCP88_RS10825 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal JCP88_RS10825 IPR005835 Nucleotidyl transferase domain JCP88_RS10825 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS10825 IPR014710 RmlC-like jelly roll fold JCP88_RS10830 IPR003362 Bacterial sugar transferase JCP88_RS10830 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JCP88_RS10850 IPR016195 Polymerase/histidinol phosphatase-like JCP88_RS10850 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC JCP88_RS10855 IPR025669 AAA domain JCP88_RS10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10855 IPR005702 Exopolysaccharide synthesis protein JCP88_RS10860 IPR003856 Polysaccharide chain length determinant N-terminal domain JCP88_RS10860 IPR032807 Tyrosine kinase, G-rich domain JCP88_RS10865 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU JCP88_RS10865 IPR004474 Cell envelope-related transcriptional attenuator domain JCP88_RS10890 IPR006194 Glycine-tRNA synthetase, heterodimeric JCP88_RS10890 IPR008909 DALR anticodon binding JCP88_RS10890 IPR015944 Glycine-tRNA ligase, beta subunit JCP88_RS10895 IPR006194 Glycine-tRNA synthetase, heterodimeric JCP88_RS10895 IPR002310 Glycine-tRNA ligase, alpha subunit JCP88_RS10900 IPR022572 DNA replication/recombination mediator RecO, N-terminal JCP88_RS10900 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS10900 IPR037278 ARFGAP/RecO-like zinc finger JCP88_RS10900 IPR042242 Recombination protein O, zinc-binding domain JCP88_RS10900 IPR003717 Recombination protein O, RecO JCP88_RS10905 IPR005225 Small GTP-binding protein domain JCP88_RS10905 IPR006073 GTP binding domain JCP88_RS10905 IPR005662 GTP-binding protein Era JCP88_RS10905 IPR015946 K homology domain-like, alpha/beta JCP88_RS10905 IPR004044 K Homology domain, type 2 JCP88_RS10905 IPR009019 K homology domain superfamily, prokaryotic type JCP88_RS10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10905 IPR030388 Era-type guanine nucleotide-binding (G) domain JCP88_RS10910 IPR036945 Diacylglycerol kinase (DAGK) superfamily JCP88_RS10910 IPR033717 Undecaprenol kinase JCP88_RS10910 IPR000829 DAGK family JCP88_RS10915 IPR023091 Metalloprotease catalytic domain superfamily, predicted JCP88_RS10915 IPR020549 Endoribonuclease YbeY, conserved site JCP88_RS10915 IPR002036 Endoribonuclease YbeY JCP88_RS10920 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain JCP88_RS10920 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain JCP88_RS10920 IPR006675 HDIG domain JCP88_RS10920 IPR006674 HD domain JCP88_RS10920 IPR003607 HD/PDEase domain JCP88_RS10925 IPR003714 PhoH-like protein JCP88_RS10925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS10930 IPR004685 Branched-chain amino acid transport system II carrier protein JCP88_RS10940 IPR012337 Ribonuclease H-like superfamily JCP88_RS10940 IPR001584 Integrase, catalytic core JCP88_RS10940 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS10945 IPR042184 YqeY/Aim41, N-terminal domain JCP88_RS10945 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 JCP88_RS10945 IPR019004 Uncharacterised protein YqeY/Aim41 JCP88_RS10945 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like JCP88_RS10950 IPR001911 Ribosomal protein S21 JCP88_RS10950 IPR018278 Ribosomal protein S21, conserved site JCP88_RS10950 IPR038380 Ribosomal protein S21 superfamily JCP88_RS10955 IPR002481 Ferric-uptake regulator JCP88_RS10955 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS10955 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS10960 IPR005177 Bifunctional kinase-pyrophosphorylase JCP88_RS10960 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein JCP88_RS10965 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS10965 IPR001845 HTH ArsR-type DNA-binding domain JCP88_RS10965 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS10965 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS10970 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JCP88_RS10970 IPR005843 Alpha-D-phosphohexomutase, C-terminal JCP88_RS10970 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JCP88_RS10970 IPR016066 Alpha-D-phosphohexomutase, conserved site JCP88_RS10970 IPR005841 Alpha-D-phosphohexomutase superfamily JCP88_RS10970 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JCP88_RS10970 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JCP88_RS10970 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JCP88_RS10975 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JCP88_RS10975 IPR005982 Thioredoxin reductase JCP88_RS10975 IPR023753 FAD/NAD(P)-binding domain JCP88_RS10975 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS10980 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS10980 IPR017853 Glycoside hydrolase superfamily JCP88_RS10980 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS10980 IPR001360 Glycoside hydrolase family 1 JCP88_RS10985 IPR019802 Glycoside hydrolase, family 4, conserved site JCP88_RS10985 IPR001088 Glycoside hydrolase, family 4 JCP88_RS10985 IPR022616 Glycosyl hydrolase, family 4, C-terminal JCP88_RS10985 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JCP88_RS10985 IPR036291 NAD(P)-binding domain superfamily JCP88_RS10995 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS10995 IPR011055 Duplicated hybrid motif JCP88_RS10995 IPR036878 Glucose permease domain IIB JCP88_RS10995 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS10995 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS10995 IPR003352 Phosphotransferase system, EIIC JCP88_RS10995 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component JCP88_RS10995 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS11000 IPR036650 CAT RNA-binding domain superfamily JCP88_RS11000 IPR001550 Transcription antiterminator, conserved site JCP88_RS11000 IPR036634 PRD domain superfamily JCP88_RS11000 IPR011608 PRD domain JCP88_RS11000 IPR004341 CAT RNA-binding domain JCP88_RS11005 IPR003593 AAA+ ATPase domain JCP88_RS11005 IPR039421 Type I protein exporter JCP88_RS11005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11005 IPR003439 ABC transporter-like JCP88_RS11005 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS11005 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11010 IPR039421 Type I protein exporter JCP88_RS11010 IPR017871 ABC transporter, conserved site JCP88_RS11010 IPR003439 ABC transporter-like JCP88_RS11010 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS11010 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS11010 IPR003593 AAA+ ATPase domain JCP88_RS11015 IPR005359 Protein with unknown function UPF0154 JCP88_RS11020 IPR001046 NRAMP family JCP88_RS11030 IPR013022 Xylose isomerase-like, TIM barrel domain JCP88_RS11030 IPR018246 AP endonuclease 2, zinc binding site JCP88_RS11030 IPR036237 Xylose isomerase-like superfamily JCP88_RS11030 IPR001719 AP endonuclease 2 JCP88_RS11035 IPR036950 Penicillin binding protein transglycosylase domain JCP88_RS11035 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS11035 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS11035 IPR023346 Lysozyme-like domain superfamily JCP88_RS11035 IPR001264 Glycosyl transferase, family 51 JCP88_RS11040 IPR028082 Periplasmic binding protein-like I JCP88_RS11040 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS11040 IPR000843 LacI-type HTH domain JCP88_RS11040 IPR006377 Catabolite control protein A JCP88_RS11045 IPR036005 Creatinase/aminopeptidase-like JCP88_RS11045 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JCP88_RS11045 IPR000994 Peptidase M24 JCP88_RS11045 IPR000587 Creatinase, N-terminal JCP88_RS11045 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JCP88_RS11055 IPR024623 Uncharacterised protein family YtxH JCP88_RS11065 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS11065 IPR005835 Nucleotidyl transferase domain JCP88_RS11065 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JCP88_RS11070 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS11070 IPR036291 NAD(P)-binding domain superfamily JCP88_RS11070 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JCP88_RS11070 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JCP88_RS11070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS11070 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JCP88_RS11075 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt JCP88_RS11080 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JCP88_RS11080 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal JCP88_RS11080 IPR011104 HPr kinase/phosphorylase, C-terminal JCP88_RS11080 IPR003755 HPr(Ser) kinase/phosphorylase JCP88_RS11085 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV JCP88_RS11110 IPR028366 Phosphate transport system protein PhoU JCP88_RS11110 IPR026022 PhoU domain JCP88_RS11110 IPR038078 PhoU-like domain superfamily JCP88_RS11115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11115 IPR005670 Phosphate transport system permease protein 1 JCP88_RS11115 IPR017871 ABC transporter, conserved site JCP88_RS11115 IPR015850 ABC transporter, phosphate import, PstB JCP88_RS11115 IPR003593 AAA+ ATPase domain JCP88_RS11115 IPR003439 ABC transporter-like JCP88_RS11120 IPR015850 ABC transporter, phosphate import, PstB JCP88_RS11120 IPR003439 ABC transporter-like JCP88_RS11120 IPR003593 AAA+ ATPase domain JCP88_RS11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11120 IPR005670 Phosphate transport system permease protein 1 JCP88_RS11120 IPR017871 ABC transporter, conserved site JCP88_RS11125 IPR005672 Phosphate transport system permease protein PstA JCP88_RS11125 IPR035906 MetI-like superfamily JCP88_RS11125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS11130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS11130 IPR011864 Phosphate ABC transporter, permease protein PstC JCP88_RS11130 IPR035906 MetI-like superfamily JCP88_RS11135 IPR024370 PBP domain JCP88_RS11135 IPR011862 Phosphate binding protein JCP88_RS11140 IPR022924 Cardiolipin synthase JCP88_RS11140 IPR027379 Cardiolipin synthase N-terminal JCP88_RS11140 IPR001736 Phospholipase D/Transphosphatidylase JCP88_RS11140 IPR030874 Cardiolipin synthase, Firmicutes-type JCP88_RS11140 IPR025202 Phospholipase D-like domain JCP88_RS11145 IPR004513 Cell division protein FtsX JCP88_RS11145 IPR040690 FtsX, extracellular domain JCP88_RS11145 IPR003838 ABC transporter permease protein domain JCP88_RS11150 IPR005286 Cell division protein FtsE, ATP-binding JCP88_RS11150 IPR017871 ABC transporter, conserved site JCP88_RS11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11150 IPR003439 ABC transporter-like JCP88_RS11150 IPR003593 AAA+ ATPase domain JCP88_RS11160 IPR004027 SEC-C motif JCP88_RS11160 IPR036670 SecA, preprotein cross-linking domain superfamily JCP88_RS11160 IPR036266 SecA, Wing/Scaffold superfamily JCP88_RS11160 IPR011116 SecA Wing/Scaffold JCP88_RS11160 IPR011130 SecA, preprotein cross-linking domain JCP88_RS11160 IPR011115 SecA DEAD-like, N-terminal JCP88_RS11160 IPR020937 SecA conserved site JCP88_RS11160 IPR000185 Protein translocase subunit SecA JCP88_RS11160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11160 IPR014018 SecA motor DEAD JCP88_RS11165 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS11165 IPR012337 Ribonuclease H-like superfamily JCP88_RS11165 IPR001584 Integrase, catalytic core JCP88_RS11170 IPR036567 Ribosome hibernation promotion factor-like JCP88_RS11170 IPR003489 Ribosome hibernation promoting factor/RaiA JCP88_RS11170 IPR034694 Ribosome hibernation promoting factor, long/plastid JCP88_RS11170 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal JCP88_RS11170 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily JCP88_RS11180 IPR006935 Helicase/UvrB, N-terminal JCP88_RS11180 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS11180 IPR001650 Helicase, C-terminal JCP88_RS11180 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11185 IPR036095 PTS system IIB component-like superfamily JCP88_RS11185 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS11185 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS11195 IPR035647 EF-G domain III/V-like JCP88_RS11195 IPR023582 Impact family JCP88_RS11195 IPR036956 Impact, N-terminal domain superfamily JCP88_RS11195 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS11195 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal JCP88_RS11195 IPR001498 Impact, N-terminal JCP88_RS11195 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site JCP88_RS11195 IPR015796 Impact family, bacterial/archaeal JCP88_RS11200 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS11200 IPR011663 UbiC transcription regulator-associated JCP88_RS11200 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11200 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS11200 IPR000524 Transcription regulator HTH, GntR JCP88_RS11225 IPR000600 ROK family JCP88_RS11235 IPR002696 Putative membrane protein insertion efficiency factor JCP88_RS11245 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JCP88_RS11245 IPR001986 Enolpyruvate transferase domain JCP88_RS11245 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JCP88_RS11245 IPR036968 Enolpyruvate transferase domain superfamily JCP88_RS11260 IPR001584 Integrase, catalytic core JCP88_RS11260 IPR012337 Ribonuclease H-like superfamily JCP88_RS11260 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS11265 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit JCP88_RS11265 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal JCP88_RS11265 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal JCP88_RS11265 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JCP88_RS11265 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily JCP88_RS11270 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal JCP88_RS11270 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JCP88_RS11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11270 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JCP88_RS11270 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JCP88_RS11270 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JCP88_RS11270 IPR005722 ATP synthase, F1 complex, beta subunit JCP88_RS11270 IPR003593 AAA+ ATPase domain JCP88_RS11275 IPR000131 ATP synthase, F1 complex, gamma subunit JCP88_RS11275 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site JCP88_RS11275 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily JCP88_RS11280 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily JCP88_RS11280 IPR000793 ATP synthase, alpha subunit, C-terminal JCP88_RS11280 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JCP88_RS11280 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JCP88_RS11280 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JCP88_RS11280 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JCP88_RS11280 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain JCP88_RS11280 IPR005294 ATP synthase, F1 complex, alpha subunit JCP88_RS11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11280 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JCP88_RS11285 IPR000711 ATPase, OSCP/delta subunit JCP88_RS11285 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily JCP88_RS11285 IPR020781 ATPase, OSCP/delta subunit, conserved site JCP88_RS11290 IPR005864 ATP synthase, F0 complex, subunit b, bacterial JCP88_RS11290 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily JCP88_RS11290 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast JCP88_RS11295 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast JCP88_RS11295 IPR000454 ATP synthase, F0 complex, subunit C JCP88_RS11295 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site JCP88_RS11295 IPR038662 F1F0 ATP synthase subunit C superfamily JCP88_RS11295 IPR002379 V-ATPase proteolipid subunit C-like domain JCP88_RS11295 IPR035921 F/V-ATP synthase subunit C superfamily JCP88_RS11300 IPR023011 ATP synthase, F0 complex, subunit A, active site JCP88_RS11300 IPR000568 ATP synthase, F0 complex, subunit A JCP88_RS11300 IPR035908 ATP synthase, F0 complex, subunit A superfamily JCP88_RS11315 IPR004692 Preprotein translocase SecG subunit JCP88_RS11320 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS11320 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase JCP88_RS11330 IPR036452 Ribonucleoside hydrolase-like JCP88_RS11330 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site JCP88_RS11330 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB JCP88_RS11330 IPR023186 Inosine/uridine-preferring nucleoside hydrolase JCP88_RS11330 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JCP88_RS11340 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JCP88_RS11340 IPR011650 Peptidase M20, dimerisation domain JCP88_RS11340 IPR002933 Peptidase M20 JCP88_RS11340 IPR036264 Bacterial exopeptidase dimerisation domain JCP88_RS11340 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase JCP88_RS11345 IPR000941 Enolase JCP88_RS11345 IPR036849 Enolase-like, C-terminal domain superfamily JCP88_RS11345 IPR020811 Enolase, N-terminal JCP88_RS11345 IPR020809 Enolase, conserved site JCP88_RS11345 IPR029017 Enolase-like, N-terminal JCP88_RS11345 IPR020810 Enolase, C-terminal TIM barrel domain JCP88_RS11350 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic JCP88_RS11350 IPR020861 Triosephosphate isomerase, active site JCP88_RS11350 IPR000652 Triosephosphate isomerase JCP88_RS11350 IPR013785 Aldolase-type TIM barrel JCP88_RS11350 IPR035990 Triosephosphate isomerase superfamily JCP88_RS11355 IPR015911 Phosphoglycerate kinase, conserved site JCP88_RS11355 IPR015824 Phosphoglycerate kinase, N-terminal JCP88_RS11355 IPR036043 Phosphoglycerate kinase superfamily JCP88_RS11355 IPR001576 Phosphoglycerate kinase JCP88_RS11360 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JCP88_RS11360 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JCP88_RS11360 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JCP88_RS11360 IPR036291 NAD(P)-binding domain superfamily JCP88_RS11360 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JCP88_RS11360 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JCP88_RS11365 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS11365 IPR037171 NagB/RpiA transferase-like JCP88_RS11365 IPR007324 Sugar-binding domain, putative JCP88_RS11365 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11370 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily JCP88_RS11370 IPR000394 RNA polymerase sigma factor 54 JCP88_RS11370 IPR007634 RNA polymerase sigma factor 54, DNA-binding JCP88_RS11370 IPR007046 RNA polymerase sigma factor 54, core-binding domain JCP88_RS11390 IPR025303 Deacetylase PdaC JCP88_RS11390 IPR037126 PdaC/RsiV-like superfamily JCP88_RS11390 IPR021729 Domain of unknown function DUF3298 JCP88_RS11395 IPR039425 RNA polymerase sigma-70 like JCP88_RS11395 IPR013325 RNA polymerase sigma factor, region 2 JCP88_RS11395 IPR007627 RNA polymerase sigma-70 region 2 JCP88_RS11395 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11395 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site JCP88_RS11395 IPR013324 RNA polymerase sigma factor, region 3/4-like JCP88_RS11395 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JCP88_RS11395 IPR014284 RNA polymerase sigma-70 like domain JCP88_RS11405 IPR007759 HB1/Asxl, restriction endonuclease HTH domain JCP88_RS11405 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily JCP88_RS11405 IPR029757 DNA-directed RNA polymerase subunit delta JCP88_RS11415 IPR024897 Octanoyltransferase LipL JCP88_RS11415 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain JCP88_RS11420 IPR003607 HD/PDEase domain JCP88_RS11420 IPR006674 HD domain JCP88_RS11425 IPR036412 HAD-like superfamily JCP88_RS11425 IPR023214 HAD superfamily JCP88_RS11425 IPR000150 Cof family JCP88_RS11425 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS11430 IPR003561 Mutator MutT JCP88_RS11430 IPR020476 NUDIX hydrolase JCP88_RS11430 IPR015797 NUDIX hydrolase-like domain superfamily JCP88_RS11430 IPR000086 NUDIX hydrolase domain JCP88_RS11430 IPR020084 NUDIX hydrolase, conserved site JCP88_RS11435 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JCP88_RS11435 IPR037523 Vicinal oxygen chelate (VOC) domain JCP88_RS11435 IPR018146 Glyoxalase I, conserved site JCP88_RS11435 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JCP88_RS11435 IPR004361 Glyoxalase I JCP88_RS11445 IPR023401 Ornithine cyclodeaminase, N-terminal JCP88_RS11445 IPR036291 NAD(P)-binding domain superfamily JCP88_RS11445 IPR003462 Ornithine cyclodeaminase/mu-crystallin JCP88_RS11450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS11450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS11450 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS11450 IPR000524 Transcription regulator HTH, GntR JCP88_RS11450 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11450 IPR004839 Aminotransferase, class I/classII JCP88_RS11450 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS11455 IPR004772 TrkH potassium transport family JCP88_RS11455 IPR003445 Cation transporter JCP88_RS11460 IPR002699 ATPase, V1 complex, subunit D JCP88_RS11465 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JCP88_RS11465 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JCP88_RS11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11465 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JCP88_RS11465 IPR022879 V-type ATP synthase regulatory subunit B/beta JCP88_RS11470 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal JCP88_RS11470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11470 IPR022878 V-type ATP synthase catalytic alpha chain JCP88_RS11470 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JCP88_RS11470 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JCP88_RS11470 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JCP88_RS11470 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JCP88_RS11470 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension JCP88_RS11470 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JCP88_RS11475 IPR008218 ATPase, V1 complex, subunit F JCP88_RS11475 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal JCP88_RS11475 IPR036906 ATPase, V1 complex, subunit F superfamily JCP88_RS11480 IPR036079 V-type ATP synthase subunit C-like JCP88_RS11480 IPR002843 ATPase, V0 complex, c/d subunit JCP88_RS11480 IPR035067 V-type ATPase subunit c JCP88_RS11485 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily JCP88_RS11485 IPR002842 V-type ATPase subunit E JCP88_RS11490 IPR002379 V-ATPase proteolipid subunit C-like domain JCP88_RS11490 IPR000245 V-ATPase proteolipid subunit JCP88_RS11490 IPR035921 F/V-ATP synthase subunit C superfamily JCP88_RS11495 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family JCP88_RS11505 IPR011697 Peptidase C26 JCP88_RS11505 IPR029062 Class I glutamine amidotransferase-like JCP88_RS11505 IPR017926 Glutamine amidotransferase JCP88_RS11510 IPR009164 Fructose-1,6-bisphosphatase class 3 JCP88_RS11520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11520 IPR025302 Domain of unknown function DUF4162 JCP88_RS11520 IPR017871 ABC transporter, conserved site JCP88_RS11520 IPR003439 ABC transporter-like JCP88_RS11520 IPR003593 AAA+ ATPase domain JCP88_RS11525 IPR000305 GIY-YIG endonuclease JCP88_RS11525 IPR001943 UVR domain JCP88_RS11525 IPR036876 UVR domain superfamily JCP88_RS11525 IPR038476 UvrC homology region 2 superfamily JCP88_RS11525 IPR001162 UvrC family homology region JCP88_RS11525 IPR010994 RuvA domain 2-like JCP88_RS11525 IPR004791 UvrABC system, subunit C JCP88_RS11525 IPR035901 GIY-YIG endonuclease superfamily JCP88_RS11530 IPR005746 Thioredoxin JCP88_RS11530 IPR013766 Thioredoxin domain JCP88_RS11530 IPR036249 Thioredoxin-like superfamily JCP88_RS11530 IPR017937 Thioredoxin, conserved site JCP88_RS11535 IPR000432 DNA mismatch repair protein MutS, C-terminal JCP88_RS11535 IPR007696 DNA mismatch repair protein MutS, core JCP88_RS11535 IPR002625 Smr domain JCP88_RS11535 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11535 IPR005747 Endonuclease MutS2 JCP88_RS11535 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JCP88_RS11535 IPR036063 Smr domain superfamily JCP88_RS11550 IPR012337 Ribonuclease H-like superfamily JCP88_RS11550 IPR012295 TBP domain superfamily JCP88_RS11550 IPR036397 Ribonuclease H superfamily JCP88_RS11550 IPR024567 Ribonuclease HII/HIII domain JCP88_RS11550 IPR001352 Ribonuclease HII/HIII JCP88_RS11550 IPR024568 Ribonuclease HIII, N-terminal JCP88_RS11550 IPR004641 Ribonuclease HIII JCP88_RS11555 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain JCP88_RS11555 IPR001119 S-layer homology domain JCP88_RS11560 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JCP88_RS11560 IPR009057 Homeobox-like domain superfamily JCP88_RS11560 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11565 IPR003439 ABC transporter-like JCP88_RS11565 IPR003593 AAA+ ATPase domain JCP88_RS11575 IPR023753 FAD/NAD(P)-binding domain JCP88_RS11575 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS11575 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS11575 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS11605 IPR037396 FMN hydroxy acid dehydrogenase domain JCP88_RS11605 IPR000262 FMN-dependent dehydrogenase JCP88_RS11605 IPR014080 L-lactate oxidase JCP88_RS11605 IPR013785 Aldolase-type TIM barrel JCP88_RS11605 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent JCP88_RS11615 IPR036291 NAD(P)-binding domain superfamily JCP88_RS11615 IPR001891 Malic oxidoreductase JCP88_RS11615 IPR012302 Malic enzyme, NAD-binding JCP88_RS11615 IPR015884 Malic enzyme, conserved site JCP88_RS11615 IPR012301 Malic enzyme, N-terminal domain JCP88_RS11615 IPR037062 Malic enzyme, N-terminal domain superfamily JCP88_RS11620 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes JCP88_RS11620 IPR004679 2-hydroxycarboxylate transporter JCP88_RS11635 IPR009711 Uncharacterised protein family UPF0473 JCP88_RS11640 IPR012337 Ribonuclease H-like superfamily JCP88_RS11640 IPR005227 Putative pre-16S rRNA nuclease JCP88_RS11640 IPR006641 YqgF/RNase H-like domain JCP88_RS11640 IPR037027 YqgF/RNase H-like domain superfamily JCP88_RS11645 IPR009309 IreB regulatory phosphoprotein JCP88_RS11675 IPR003593 AAA+ ATPase domain JCP88_RS11675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11675 IPR017871 ABC transporter, conserved site JCP88_RS11675 IPR003439 ABC transporter-like JCP88_RS11685 IPR015402 Protein of unknown function DUF1980 JCP88_RS11690 IPR005524 Predicted permease DUF318 JCP88_RS11695 IPR036249 Thioredoxin-like superfamily JCP88_RS11695 IPR013766 Thioredoxin domain JCP88_RS11700 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11700 IPR022876 Redox-sensing transcriptional repressor Rex JCP88_RS11700 IPR009718 Rex DNA-binding, C-terminal domain JCP88_RS11700 IPR036291 NAD(P)-binding domain superfamily JCP88_RS11700 IPR003781 CoA-binding JCP88_RS11700 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS11705 IPR003593 AAA+ ATPase domain JCP88_RS11705 IPR032524 ABC transporter Uup, C-terminal JCP88_RS11705 IPR032781 ABC-transporter extension domain JCP88_RS11705 IPR003439 ABC transporter-like JCP88_RS11705 IPR017871 ABC transporter, conserved site JCP88_RS11705 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11705 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JCP88_RS11710 IPR010905 Glycosyl hydrolase, family 88 JCP88_RS11710 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS11710 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS11720 IPR010905 Glycosyl hydrolase, family 88 JCP88_RS11720 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS11720 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS11725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS11725 IPR035906 MetI-like superfamily JCP88_RS11730 IPR035906 MetI-like superfamily JCP88_RS11730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS11745 IPR011051 RmlC-like cupin domain superfamily JCP88_RS11745 IPR014710 RmlC-like jelly roll fold JCP88_RS11745 IPR018062 HTH domain AraC-type, conserved site JCP88_RS11745 IPR013096 Cupin 2, conserved barrel JCP88_RS11745 IPR009057 Homeobox-like domain superfamily JCP88_RS11745 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS11750 IPR023536 Coenzyme A disulphide reductase, staphyolococci JCP88_RS11750 IPR017758 Coenzyme A disulphide reductase JCP88_RS11750 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS11750 IPR023753 FAD/NAD(P)-binding domain JCP88_RS11750 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS11750 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS11770 IPR002633 Bacteriocin, class IIa JCP88_RS11770 IPR023384 Bacteriocin, class IIa, conserved site JCP88_RS11775 IPR035906 MetI-like superfamily JCP88_RS11775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS11780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11780 IPR000644 CBS domain JCP88_RS11780 IPR005892 Glycine betaine transport ATP-binding subunit JCP88_RS11780 IPR003593 AAA+ ATPase domain JCP88_RS11780 IPR003439 ABC transporter-like JCP88_RS11780 IPR017871 ABC transporter, conserved site JCP88_RS11785 IPR011711 GntR, C-terminal JCP88_RS11785 IPR008920 Transcription regulator FadR/GntR, C-terminal JCP88_RS11785 IPR000524 Transcription regulator HTH, GntR JCP88_RS11785 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS11785 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS11795 IPR003373 Ferrous iron transport protein B JCP88_RS11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11795 IPR011640 Ferrous iron transport protein B, C-terminal JCP88_RS11795 IPR041069 FeoB, cytosolic helical domain JCP88_RS11795 IPR030389 FeoB-type guanine nucleotide-binding (G) domain JCP88_RS11795 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JCP88_RS11805 IPR002109 Glutaredoxin JCP88_RS11805 IPR036249 Thioredoxin-like superfamily JCP88_RS11805 IPR011909 Glutaredoxin-like protein NrdH JCP88_RS11810 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal JCP88_RS11810 IPR013554 Ribonucleotide reductase N-terminal JCP88_RS11810 IPR013509 Ribonucleotide reductase large subunit, N-terminal JCP88_RS11810 IPR039718 Ribonucleoside-diphosphate reductase large subunit JCP88_RS11810 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE JCP88_RS11810 IPR000788 Ribonucleotide reductase large subunit, C-terminal JCP88_RS11810 IPR013346 Ribonucleotide reductase, class I , alpha subunit JCP88_RS11815 IPR000358 Ribonucleotide reductase small subunit family JCP88_RS11815 IPR030475 Ribonucleotide reductase small subunit, acitve site JCP88_RS11815 IPR033909 Ribonucleotide reductase small subunit JCP88_RS11815 IPR026494 Ribonucleoside reductase subunit beta, NrdF JCP88_RS11815 IPR012348 Ribonucleotide reductase-like JCP88_RS11815 IPR009078 Ferritin-like superfamily JCP88_RS11820 IPR002549 Transmembrane protein TqsA-like JCP88_RS11825 IPR003416 MgtC/SapB/SrpB/YhiD family JCP88_RS11830 IPR037171 NagB/RpiA transferase-like JCP88_RS11830 IPR018321 Glucosamine-6-phosphate isomerase, conserved site JCP88_RS11830 IPR004547 Glucosamine-6-phosphate isomerase JCP88_RS11830 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JCP88_RS11835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11835 IPR017871 ABC transporter, conserved site JCP88_RS11835 IPR003439 ABC transporter-like JCP88_RS11835 IPR032781 ABC-transporter extension domain JCP88_RS11835 IPR003593 AAA+ ATPase domain JCP88_RS11850 IPR036259 MFS transporter superfamily JCP88_RS11850 IPR020846 Major facilitator superfamily domain JCP88_RS11850 IPR011701 Major facilitator superfamily JCP88_RS11860 IPR000206 Ribosomal protein L7/L12 JCP88_RS11860 IPR008932 Ribosomal protein L7/L12, oligomerisation JCP88_RS11860 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JCP88_RS11860 IPR013823 Ribosomal protein L7/L12, C-terminal JCP88_RS11860 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily JCP88_RS11865 IPR001790 Ribosomal protein L10P JCP88_RS11865 IPR022973 Ribosomal protein L10 JCP88_RS11870 IPR002143 Ribosomal protein L1 JCP88_RS11870 IPR023673 Ribosomal protein L1, conserved site JCP88_RS11870 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JCP88_RS11870 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JCP88_RS11870 IPR023674 Ribosomal protein L1-like JCP88_RS11870 IPR005878 Ribosomal protein L1, bacterial-type JCP88_RS11875 IPR000911 Ribosomal protein L11/L12 JCP88_RS11875 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JCP88_RS11875 IPR006519 Ribosomal protein L11, bacterial-type JCP88_RS11875 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JCP88_RS11875 IPR020784 Ribosomal protein L11, N-terminal JCP88_RS11875 IPR020785 Ribosomal protein L11, conserved site JCP88_RS11875 IPR020783 Ribosomal protein L11, C-terminal JCP88_RS11880 IPR005131 Serine dehydratase beta chain JCP88_RS11880 IPR002912 ACT domain JCP88_RS11880 IPR029009 Allosteric substrate binding domain superfamily JCP88_RS11880 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit JCP88_RS11885 IPR005130 Serine dehydratase-like, alpha subunit JCP88_RS11885 IPR004642 Serine dehydratase, alpha subunit JCP88_RS11890 IPR000262 FMN-dependent dehydrogenase JCP88_RS11890 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent JCP88_RS11890 IPR037396 FMN hydroxy acid dehydrogenase domain JCP88_RS11890 IPR014080 L-lactate oxidase JCP88_RS11890 IPR013785 Aldolase-type TIM barrel JCP88_RS11895 IPR029058 Alpha/Beta hydrolase fold JCP88_RS11895 IPR000073 Alpha/beta hydrolase fold-1 JCP88_RS11900 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JCP88_RS11900 IPR008991 Translation protein SH3-like domain superfamily JCP88_RS11900 IPR005824 KOW JCP88_RS11900 IPR001062 Transcription antitermination protein, NusG JCP88_RS11900 IPR006645 NusG, N-terminal JCP88_RS11900 IPR036735 NusG, N-terminal domain superfamily JCP88_RS11900 IPR014722 Ribosomal protein L2, domain 2 JCP88_RS11905 IPR005807 SecE subunit of protein translocation complex, bacterial-like JCP88_RS11905 IPR038379 SecE superfamily JCP88_RS11905 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit JCP88_RS11910 IPR038584 Ribosomal protein L33 superfamily JCP88_RS11910 IPR001705 Ribosomal protein L33 JCP88_RS11910 IPR011332 Zinc-binding ribosomal protein JCP88_RS11925 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JCP88_RS11925 IPR001206 Diacylglycerol kinase, catalytic domain JCP88_RS11925 IPR005218 Diacylglycerol/lipid kinase JCP88_RS11925 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JCP88_RS11940 IPR003593 AAA+ ATPase domain JCP88_RS11940 IPR017871 ABC transporter, conserved site JCP88_RS11940 IPR003439 ABC transporter-like JCP88_RS11940 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11945 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JCP88_RS11945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS11950 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS11950 IPR000792 Transcription regulator LuxR, C-terminal JCP88_RS11950 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS11950 IPR011006 CheY-like superfamily JCP88_RS11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS11960 IPR029493 RecD helicase-like helix-hairpin-helix domain JCP88_RS11960 IPR003593 AAA+ ATPase domain JCP88_RS11960 IPR006345 RecD-like DNA helicase JCP88_RS11960 IPR041451 RecD-like DNA helicase, SH3 domain JCP88_RS11960 IPR027785 UvrD-like helicase C-terminal domain JCP88_RS11970 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase JCP88_RS11970 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS11970 IPR029028 Alpha/beta knot methyltransferases JCP88_RS11970 IPR001537 tRNA/rRNA methyltransferase, SpoU type JCP88_RS11975 IPR004033 UbiE/COQ5 methyltransferase JCP88_RS11975 IPR023576 UbiE/COQ5 methyltransferase, conserved site JCP88_RS11975 IPR032904 2-phytyl-1,4-naphtoquinone methyltransferase MenG JCP88_RS11975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS11980 IPR023648 Copper homeostasis CutC domain JCP88_RS11980 IPR036822 Copper homeostasis (CutC) domain superfamily JCP88_RS11980 IPR005627 Copper homeostasis protein CutC JCP88_RS11985 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JCP88_RS11985 IPR006667 SLC41 divalent cation transporters, integral membrane domain JCP88_RS11985 IPR006669 Magnesium transporter MgtE JCP88_RS11985 IPR038076 MgtE, N-terminal domain superfamily JCP88_RS11985 IPR006668 Magnesium transporter, MgtE intracellular domain JCP88_RS11985 IPR000644 CBS domain JCP88_RS11985 IPR038048 Magnesium transporter MgtE, transmembrane domain JCP88_RS11990 IPR002942 RNA-binding S4 domain JCP88_RS11990 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS11990 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JCP88_RS11990 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS11990 IPR006225 Pseudouridine synthase, RluC/RluD JCP88_RS11995 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JCP88_RS11995 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JCP88_RS11995 IPR002504 NAD kinase JCP88_RS11995 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal JCP88_RS12000 IPR007685 RelA/SpoT JCP88_RS12005 IPR033469 CYTH-like domain superfamily JCP88_RS12005 IPR023577 CYTH domain JCP88_RS12005 IPR009195 Uncharacterised protein family YjbK JCP88_RS12015 IPR001584 Integrase, catalytic core JCP88_RS12015 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS12015 IPR012337 Ribonuclease H-like superfamily JCP88_RS12020 IPR013647 Oligopeptidase F, N-terminal domain JCP88_RS12020 IPR001567 Peptidase M3A/M3B catalytic domain JCP88_RS12020 IPR004438 Peptidase M3B, oligoendopeptidase F JCP88_RS12020 IPR042088 Oligoendopeptidase F, C-terminal domain JCP88_RS12030 IPR038471 MecA, C-terminal domain superfamily JCP88_RS12030 IPR008681 Negative regulator of genetic competence, MecA JCP88_RS12035 IPR006504 Transcriptional regulator Spx/MgsR JCP88_RS12035 IPR036249 Thioredoxin-like superfamily JCP88_RS12035 IPR006660 Arsenate reductase-like JCP88_RS12035 IPR023731 Regulatory protein Spx JCP88_RS12040 IPR001207 Transposase, mutator type JCP88_RS12050 IPR000330 SNF2-related, N-terminal domain JCP88_RS12050 IPR038718 SNF2-like, N-terminal domain superfamily JCP88_RS12050 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12050 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS12050 IPR007527 Zinc finger, SWIM-type JCP88_RS12050 IPR001650 Helicase, C-terminal JCP88_RS12055 IPR038729 Rad50/SbcC-type AAA domain JCP88_RS12055 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12060 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JCP88_RS12060 IPR026843 Nuclease SbcCD subunit D, C-terminal domain JCP88_RS12060 IPR004593 Nuclease SbcCD subunit D JCP88_RS12060 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain JCP88_RS12060 IPR029052 Metallo-dependent phosphatase-like JCP88_RS12065 IPR002123 Phospholipid/glycerol acyltransferase JCP88_RS12070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12070 IPR007848 Methyltransferase small domain JCP88_RS12075 IPR000305 GIY-YIG endonuclease JCP88_RS12075 IPR035901 GIY-YIG endonuclease superfamily JCP88_RS12080 IPR036514 SGNH hydrolase superfamily JCP88_RS12080 IPR002656 Acyltransferase 3 JCP88_RS12085 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JCP88_RS12085 IPR019264 Domain of unknown function DUF2179 JCP88_RS12085 IPR003740 Uncharacterised membrane protein YitT JCP88_RS12090 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JCP88_RS12090 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS12090 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JCP88_RS12090 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JCP88_RS12090 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS12090 IPR004115 GAD-like domain superfamily JCP88_RS12090 IPR029351 GAD domain JCP88_RS12090 IPR004524 Aspartate-tRNA ligase, type 1 JCP88_RS12095 IPR004154 Anticodon-binding JCP88_RS12095 IPR033656 Histidyl-anticodon-binding JCP88_RS12095 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JCP88_RS12095 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain JCP88_RS12095 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS12095 IPR036621 Anticodon-binding domain superfamily JCP88_RS12095 IPR015807 Histidine-tRNA ligase JCP88_RS12100 IPR018170 Aldo/keto reductase, conserved site JCP88_RS12100 IPR036812 NADP-dependent oxidoreductase domain superfamily JCP88_RS12100 IPR020471 Aldo/keto reductase JCP88_RS12100 IPR023210 NADP-dependent oxidoreductase domain JCP88_RS12105 IPR001128 Cytochrome P450 JCP88_RS12105 IPR002401 Cytochrome P450, E-class, group I JCP88_RS12105 IPR036396 Cytochrome P450 superfamily JCP88_RS12110 IPR003732 D-aminoacyl-tRNA deacylase DTD JCP88_RS12110 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JCP88_RS12115 IPR003607 HD/PDEase domain JCP88_RS12115 IPR012675 Beta-grasp domain superfamily JCP88_RS12115 IPR004811 RelA/SpoT family JCP88_RS12115 IPR033655 RelA, TGS domain JCP88_RS12115 IPR007685 RelA/SpoT JCP88_RS12115 IPR004095 TGS JCP88_RS12115 IPR002912 ACT domain JCP88_RS12115 IPR012676 TGS-like JCP88_RS12120 IPR029028 Alpha/beta knot methyltransferases JCP88_RS12120 IPR006700 Ribosomal RNA small subunit methyltransferase E JCP88_RS12120 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS12120 IPR015947 PUA-like superfamily JCP88_RS12125 IPR004498 Ribosomal protein L11 methyltransferase JCP88_RS12125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12135 IPR011034 Formyl transferase-like, C-terminal domain superfamily JCP88_RS12135 IPR003180 Methylpurine-DNA glycosylase JCP88_RS12135 IPR036995 Methylpurine-DNA glycosylase superfamily JCP88_RS12140 IPR003593 AAA+ ATPase domain JCP88_RS12140 IPR032423 AAA C-terminal domain JCP88_RS12140 IPR021886 MgsA AAA+ ATPase C-terminal JCP88_RS12140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12140 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JCP88_RS12140 IPR008824 RuvB-like P-loop domain JCP88_RS12155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS12155 IPR006015 Universal stress protein A family JCP88_RS12155 IPR006016 UspA JCP88_RS12165 IPR003593 AAA+ ATPase domain JCP88_RS12165 IPR032524 ABC transporter Uup, C-terminal JCP88_RS12165 IPR032781 ABC-transporter extension domain JCP88_RS12165 IPR003439 ABC transporter-like JCP88_RS12165 IPR017871 ABC transporter, conserved site JCP88_RS12165 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12165 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JCP88_RS12170 IPR000890 Aliphatic acid kinase, short-chain JCP88_RS12170 IPR023865 Aliphatic acid kinase, short-chain, conserved site JCP88_RS12170 IPR004372 Acetate/propionate kinase JCP88_RS12175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12175 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted JCP88_RS12175 IPR003356 DNA methylase, adenine-specific JCP88_RS12200 IPR000983 Bacterial general secretion pathway protein G-type pilin JCP88_RS12200 IPR016940 ComG operon protein C JCP88_RS12200 IPR012902 Prokaryotic N-terminal methylation site JCP88_RS12205 IPR003004 GspF/PilC family JCP88_RS12205 IPR001992 Type II secretion system conserved site JCP88_RS12205 IPR042094 Type II secretion system F domain superfamily JCP88_RS12205 IPR018076 Type II secretion system F domain JCP88_RS12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12210 IPR001482 Type II/IV secretion system protein JCP88_RS12210 IPR003593 AAA+ ATPase domain JCP88_RS12215 IPR026912 Adenine deaminase C-terminal domain JCP88_RS12215 IPR006680 Amidohydrolase-related JCP88_RS12215 IPR006679 Adenine deaminase JCP88_RS12215 IPR011059 Metal-dependent hydrolase, composite domain superfamily JCP88_RS12215 IPR032466 Metal-dependent hydrolase JCP88_RS12220 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type JCP88_RS12220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12230 IPR010288 Bacterial ABC transporter EcsB JCP88_RS12235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12235 IPR003439 ABC transporter-like JCP88_RS12235 IPR003593 AAA+ ATPase domain JCP88_RS12240 IPR011146 HIT-like domain JCP88_RS12240 IPR036265 HIT-like superfamily JCP88_RS12240 IPR039384 HINT family JCP88_RS12240 IPR019808 Histidine triad, conserved site JCP88_RS12240 IPR001310 Histidine triad (HIT) protein JCP88_RS12250 IPR027304 Trigger factor/SurA domain superfamily JCP88_RS12250 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JCP88_RS12250 IPR023059 Foldase protein PrsA JCP88_RS12255 IPR006674 HD domain JCP88_RS12255 IPR003607 HD/PDEase domain JCP88_RS12255 IPR020873 3'-5' exoribonuclease YhaM JCP88_RS12255 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JCP88_RS12255 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12260 IPR038734 Uncharacterized protein YhaN, AAA domain JCP88_RS12265 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain JCP88_RS12265 IPR029052 Metallo-dependent phosphatase-like JCP88_RS12265 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JCP88_RS12265 IPR014576 Predicted phosphoesterase, YhaO type JCP88_RS12270 IPR036412 HAD-like superfamily JCP88_RS12270 IPR000150 Cof family JCP88_RS12270 IPR023214 HAD superfamily JCP88_RS12270 IPR006379 HAD-superfamily hydrolase, subfamily IIB JCP88_RS12295 IPR039672 Lactose permease-like JCP88_RS12295 IPR018043 Sodium:galactoside symporter, conserved site JCP88_RS12295 IPR020846 Major facilitator superfamily domain JCP88_RS12295 IPR001927 Sodium:galactoside symporter JCP88_RS12295 IPR036259 MFS transporter superfamily JCP88_RS12300 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JCP88_RS12300 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JCP88_RS12300 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain JCP88_RS12300 IPR006710 Glycoside hydrolase, family 43 JCP88_RS12315 IPR002471 Peptidase S9, serine active site JCP88_RS12315 IPR002925 Dienelactone hydrolase JCP88_RS12315 IPR029058 Alpha/Beta hydrolase fold JCP88_RS12320 IPR011050 Pectin lyase fold/virulence factor JCP88_RS12320 IPR012334 Pectin lyase fold JCP88_RS12320 IPR006626 Parallel beta-helix repeat JCP88_RS12320 IPR000743 Glycoside hydrolase, family 28 JCP88_RS12325 IPR010905 Glycosyl hydrolase, family 88 JCP88_RS12325 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS12325 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS12330 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS12340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS12340 IPR035906 MetI-like superfamily JCP88_RS12345 IPR035906 MetI-like superfamily JCP88_RS12345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS12350 IPR041522 CdaR, GGDEF-like domain JCP88_RS12350 IPR009057 Homeobox-like domain superfamily JCP88_RS12350 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS12355 IPR028082 Periplasmic binding protein-like I JCP88_RS12355 IPR000843 LacI-type HTH domain JCP88_RS12355 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS12360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS12360 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JCP88_RS12360 IPR023668 Altronate oxidoreductase JCP88_RS12360 IPR000669 Mannitol dehydrogenase JCP88_RS12360 IPR013131 Mannitol dehydrogenase, N-terminal JCP88_RS12360 IPR036291 NAD(P)-binding domain superfamily JCP88_RS12360 IPR013118 Mannitol dehydrogenase, C-terminal JCP88_RS12365 IPR007392 D-galactarate/Altronate dehydratase, C-terminal JCP88_RS12365 IPR013974 SAF domain JCP88_RS12370 IPR032466 Metal-dependent hydrolase JCP88_RS12370 IPR003766 Uronate isomerase JCP88_RS12375 IPR001087 GDSL lipase/esterase JCP88_RS12375 IPR036514 SGNH hydrolase superfamily JCP88_RS12375 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like JCP88_RS12385 IPR003439 ABC transporter-like JCP88_RS12385 IPR017871 ABC transporter, conserved site JCP88_RS12385 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS12385 IPR003593 AAA+ ATPase domain JCP88_RS12385 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12385 IPR039421 Type I protein exporter JCP88_RS12385 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS12390 IPR023378 YheA/YmcA-like domain superfamily JCP88_RS12390 IPR010368 Control of competence regulator ComK, YlbF/YmcA JCP88_RS12395 IPR036950 Penicillin binding protein transglycosylase domain JCP88_RS12395 IPR023346 Lysozyme-like domain superfamily JCP88_RS12395 IPR001460 Penicillin-binding protein, transpeptidase JCP88_RS12395 IPR001264 Glycosyl transferase, family 51 JCP88_RS12395 IPR012338 Beta-lactamase/transpeptidase-like JCP88_RS12400 IPR036986 RNA-binding S4 domain superfamily JCP88_RS12400 IPR002942 RNA-binding S4 domain JCP88_RS12400 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS12400 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JCP88_RS12400 IPR006225 Pseudouridine synthase, RluC/RluD JCP88_RS12400 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS12405 IPR000600 ROK family JCP88_RS12410 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS12410 IPR041509 Glycosyl hydrolases 38, beta-1 domain JCP88_RS12410 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JCP88_RS12410 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JCP88_RS12410 IPR015341 Glycoside hydrolase family 38, central domain JCP88_RS12410 IPR037094 Glycoside hydrolase family 38, central domain superfamily JCP88_RS12410 IPR000602 Glycoside hydrolase family 38, N-terminal domain JCP88_RS12410 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JCP88_RS12410 IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain JCP88_RS12410 IPR011682 Glycosyl hydrolase family 38, C-terminal JCP88_RS12420 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS12420 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS12420 IPR000524 Transcription regulator HTH, GntR JCP88_RS12420 IPR028082 Periplasmic binding protein-like I JCP88_RS12420 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain JCP88_RS12430 IPR011006 CheY-like superfamily JCP88_RS12430 IPR009057 Homeobox-like domain superfamily JCP88_RS12430 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS12430 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS12435 IPR010559 Signal transduction histidine kinase, internal region JCP88_RS12435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS12435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS12435 IPR005467 Histidine kinase domain JCP88_RS12435 IPR033479 Double Cache domain 1 JCP88_RS12435 IPR003660 HAMP domain JCP88_RS12435 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS12445 IPR022627 Domain of unknown function DUF3502 JCP88_RS12450 IPR035906 MetI-like superfamily JCP88_RS12450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS12455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS12455 IPR035906 MetI-like superfamily JCP88_RS12460 IPR036986 RNA-binding S4 domain superfamily JCP88_RS12460 IPR002942 RNA-binding S4 domain JCP88_RS12460 IPR020103 Pseudouridine synthase, catalytic domain superfamily JCP88_RS12460 IPR006145 Pseudouridine synthase, RsuA/RluA JCP88_RS12460 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JCP88_RS12460 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JCP88_RS12460 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JCP88_RS12465 IPR002797 Polysaccharide biosynthesis protein JCP88_RS12465 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain JCP88_RS12465 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type JCP88_RS12475 IPR035911 MurE/MurF, N-terminal JCP88_RS12475 IPR013221 Mur ligase, central JCP88_RS12475 IPR036615 Mur ligase, C-terminal domain superfamily JCP88_RS12475 IPR004101 Mur ligase, C-terminal JCP88_RS12475 IPR036565 Mur-like, catalytic domain superfamily JCP88_RS12475 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JCP88_RS12480 IPR003352 Phosphotransferase system, EIIC JCP88_RS12480 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS12480 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS12490 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JCP88_RS12490 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JCP88_RS12495 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS12495 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS12495 IPR013011 Phosphotransferase system, EIIB component, type 2 JCP88_RS12495 IPR036095 PTS system IIB component-like superfamily JCP88_RS12495 IPR002178 PTS EIIA type-2 domain JCP88_RS12495 IPR016152 Phosphotransferase/anion transporter JCP88_RS12495 IPR011608 PRD domain JCP88_RS12495 IPR013196 Helix-turn-helix, type 11 JCP88_RS12495 IPR007737 Mga helix-turn-helix domain JCP88_RS12495 IPR036634 PRD domain superfamily JCP88_RS12500 IPR036095 PTS system IIB component-like superfamily JCP88_RS12500 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS12500 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS12540 IPR000551 MerR-type HTH domain JCP88_RS12540 IPR011256 Regulatory factor, effector binding domain superfamily JCP88_RS12540 IPR010499 Bacterial transcription activator, effector binding JCP88_RS12540 IPR009061 Putative DNA-binding domain superfamily JCP88_RS12540 IPR029442 GyrI-like small molecule binding domain JCP88_RS12545 IPR003593 AAA+ ATPase domain JCP88_RS12545 IPR017871 ABC transporter, conserved site JCP88_RS12545 IPR003439 ABC transporter-like JCP88_RS12545 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS12545 IPR039421 Type I protein exporter JCP88_RS12545 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS12545 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12550 IPR003439 ABC transporter-like JCP88_RS12550 IPR003593 AAA+ ATPase domain JCP88_RS12550 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS12550 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS12550 IPR039421 Type I protein exporter JCP88_RS12550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS12560 IPR015413 Methionyl/Leucyl tRNA synthetase JCP88_RS12560 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JCP88_RS12560 IPR025709 Leucyl-tRNA synthetase, editing domain JCP88_RS12560 IPR002302 Leucine-tRNA ligase JCP88_RS12560 IPR002300 Aminoacyl-tRNA synthetase, class Ia JCP88_RS12560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS12560 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JCP88_RS12560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS12565 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS12565 IPR036779 LysM domain superfamily JCP88_RS12565 IPR018392 LysM domain JCP88_RS12570 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JCP88_RS12570 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JCP88_RS12575 IPR005911 Protein YhcC-like JCP88_RS12575 IPR006638 Elp3/MiaB/NifB JCP88_RS12575 IPR039661 ELP3/YhcC JCP88_RS12575 IPR007197 Radical SAM JCP88_RS12575 IPR023404 Radical SAM, alpha/beta horseshoe JCP88_RS12575 IPR032432 Radical SAM, C-terminal extension JCP88_RS12580 IPR010719 Putative rRNA methylase JCP88_RS12580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12590 IPR001207 Transposase, mutator type JCP88_RS12625 IPR010998 Integrase/recombinase, N-terminal JCP88_RS12625 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS12625 IPR002104 Integrase, catalytic domain JCP88_RS12625 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS12625 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS12630 IPR001207 Transposase, mutator type JCP88_RS12645 IPR003439 ABC transporter-like JCP88_RS12645 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS12645 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS12645 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12645 IPR039421 Type I protein exporter JCP88_RS12645 IPR003593 AAA+ ATPase domain JCP88_RS12650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12650 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS12650 IPR039421 Type I protein exporter JCP88_RS12650 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS12650 IPR003593 AAA+ ATPase domain JCP88_RS12650 IPR017871 ABC transporter, conserved site JCP88_RS12650 IPR003439 ABC transporter-like JCP88_RS12655 IPR004111 Tetracycline repressor TetR, C-terminal JCP88_RS12655 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS12655 IPR009057 Homeobox-like domain superfamily JCP88_RS12655 IPR003012 Tetracycline transcriptional regulator, TetR JCP88_RS12655 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JCP88_RS12655 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JCP88_RS12665 IPR004638 Drug resistance transporter EmrB-like JCP88_RS12665 IPR011701 Major facilitator superfamily JCP88_RS12665 IPR036259 MFS transporter superfamily JCP88_RS12665 IPR005829 Sugar transporter, conserved site JCP88_RS12665 IPR020846 Major facilitator superfamily domain JCP88_RS12670 IPR022630 S-adenosylmethionine synthetase, C-terminal JCP88_RS12670 IPR022631 S-adenosylmethionine synthetase, conserved site JCP88_RS12670 IPR022636 S-adenosylmethionine synthetase superfamily JCP88_RS12670 IPR002133 S-adenosylmethionine synthetase JCP88_RS12670 IPR022629 S-adenosylmethionine synthetase, central domain JCP88_RS12670 IPR022628 S-adenosylmethionine synthetase, N-terminal JCP88_RS12825 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JCP88_RS12825 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II JCP88_RS12825 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JCP88_RS12825 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS12825 IPR002313 Lysine-tRNA ligase, class II JCP88_RS12825 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal JCP88_RS12825 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS12830 IPR018517 tRNA-dihydrouridine synthase, conserved site JCP88_RS12830 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal JCP88_RS12830 IPR001269 tRNA-dihydrouridine synthase JCP88_RS12830 IPR035587 DUS-like, FMN-binding domain JCP88_RS12830 IPR013785 Aldolase-type TIM barrel JCP88_RS12830 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 JCP88_RS12835 IPR016154 Heat shock protein Hsp33, C-terminal JCP88_RS12835 IPR016153 Heat shock protein Hsp33, N-terminal JCP88_RS12835 IPR000397 Heat shock protein Hsp33 JCP88_RS12840 IPR000642 Peptidase M41 JCP88_RS12840 IPR037219 Peptidase M41-like JCP88_RS12840 IPR011546 Peptidase M41, FtsH extracellular JCP88_RS12840 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12840 IPR041569 AAA ATPase, AAA+ lid domain JCP88_RS12840 IPR003960 ATPase, AAA-type, conserved site JCP88_RS12840 IPR003593 AAA+ ATPase domain JCP88_RS12840 IPR005936 Peptidase, FtsH JCP88_RS12840 IPR003959 ATPase, AAA-type, core JCP88_RS12845 IPR005904 Hypoxanthine phosphoribosyl transferase JCP88_RS12845 IPR000836 Phosphoribosyltransferase domain JCP88_RS12845 IPR029057 Phosphoribosyltransferase-like JCP88_RS12850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS12850 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal JCP88_RS12850 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JCP88_RS12850 IPR012094 tRNA(Ile)-lysidine synthase JCP88_RS12850 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal JCP88_RS12855 IPR022967 RNA-binding domain, S1 JCP88_RS12855 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS12855 IPR003029 S1 domain JCP88_RS12865 IPR036986 RNA-binding S4 domain superfamily JCP88_RS12865 IPR025490 RNA-binding protein, HP1423 type JCP88_RS12865 IPR002942 RNA-binding S4 domain JCP88_RS12870 IPR002797 Polysaccharide biosynthesis protein JCP88_RS12870 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain JCP88_RS12870 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type JCP88_RS12875 IPR036101 CarD-like/TRCF domain superfamily JCP88_RS12875 IPR003711 CarD-like/TRCF domain JCP88_RS12875 IPR011545 DEAD/DEAH box helicase domain JCP88_RS12875 IPR001650 Helicase, C-terminal JCP88_RS12875 IPR005118 Transcription-repair-coupling factor, C-terminal domain JCP88_RS12875 IPR037235 TRCF-like, C-terminal domain JCP88_RS12875 IPR041471 UvrB, interaction domain JCP88_RS12875 IPR004576 Transcription-repair coupling factor JCP88_RS12875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12875 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS12880 IPR001328 Peptidyl-tRNA hydrolase JCP88_RS12880 IPR036416 Peptidyl-tRNA hydrolase superfamily JCP88_RS12880 IPR018171 Peptidyl-tRNA hydrolase, conserved site JCP88_RS12885 IPR036291 NAD(P)-binding domain superfamily JCP88_RS12885 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JCP88_RS12885 IPR001236 Lactate/malate dehydrogenase, N-terminal JCP88_RS12885 IPR018177 L-lactate dehydrogenase, active site JCP88_RS12885 IPR011304 L-lactate dehydrogenase JCP88_RS12885 IPR001557 L-lactate/malate dehydrogenase JCP88_RS12885 IPR022383 Lactate/malate dehydrogenase, C-terminal JCP88_RS12895 IPR017856 Integrase-like, N-terminal JCP88_RS12895 IPR002876 Transcriptional regulator TACO1-like JCP88_RS12895 IPR026564 Transcriptional regulator TACO1-like, domain 3 JCP88_RS12895 IPR029072 YebC-like JCP88_RS12910 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS12910 IPR000064 Endopeptidase, NLPC/P60 domain JCP88_RS12920 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 JCP88_RS12920 IPR007221 Rod shape-determining protein MreC JCP88_RS12920 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 JCP88_RS12930 IPR013785 Aldolase-type TIM barrel JCP88_RS12930 IPR026019 Ribulose-phosphate 3-epimerase JCP88_RS12930 IPR000056 Ribulose-phosphate 3-epimerase-like JCP88_RS12930 IPR011060 Ribulose-phosphate binding barrel JCP88_RS12935 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JCP88_RS12935 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS12935 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal JCP88_RS12935 IPR010914 RsgA GTPase domain JCP88_RS12935 IPR004881 Ribosome biogenesis GTPase RsgA JCP88_RS12935 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12940 IPR017441 Protein kinase, ATP binding site JCP88_RS12940 IPR008271 Serine/threonine-protein kinase, active site JCP88_RS12940 IPR000719 Protein kinase domain JCP88_RS12940 IPR011009 Protein kinase-like domain superfamily JCP88_RS12940 IPR005543 PASTA domain JCP88_RS12945 IPR015655 Protein phosphatase 2C family JCP88_RS12945 IPR036457 PPM-type phosphatase domain superfamily JCP88_RS12945 IPR001932 PPM-type phosphatase domain JCP88_RS12950 IPR035926 NusB-like superfamily JCP88_RS12950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS12950 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JCP88_RS12950 IPR004573 rRNA small subunit methyltransferase B JCP88_RS12950 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JCP88_RS12950 IPR006027 NusB/RsmB/TIM44 JCP88_RS12950 IPR023267 RNA (C5-cytosine) methyltransferase JCP88_RS12955 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JCP88_RS12955 IPR036477 Formyl transferase, N-terminal domain superfamily JCP88_RS12955 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain JCP88_RS12955 IPR002376 Formyl transferase, N-terminal JCP88_RS12955 IPR005793 Formyl transferase, C-terminal JCP88_RS12955 IPR037022 Formyl transferase, C-terminal domain superfamily JCP88_RS12955 IPR011034 Formyl transferase-like, C-terminal domain superfamily JCP88_RS12955 IPR005794 Methionyl-tRNA formyltransferase JCP88_RS12960 IPR023635 Peptide deformylase JCP88_RS12960 IPR036821 Peptide deformylase superfamily JCP88_RS12965 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain JCP88_RS12965 IPR006935 Helicase/UvrB, N-terminal JCP88_RS12965 IPR041222 Primosomal protein N', 3' DNA-binding domain JCP88_RS12965 IPR005259 Primosomal protein N' JCP88_RS12965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12965 IPR001650 Helicase, C-terminal JCP88_RS12965 IPR014001 Helicase superfamily 1/2, ATP-binding domain JCP88_RS12965 IPR041236 Primosomal protein N, C-terminal domain JCP88_RS12965 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily JCP88_RS12970 IPR006110 RNA polymerase, subunit omega/K/RPB6 JCP88_RS12970 IPR012293 RNA polymerase subunit, RPB6/omega JCP88_RS12970 IPR036161 RPB6/omega subunit-like superfamily JCP88_RS12970 IPR003716 DNA-directed RNA polymerase, omega subunit JCP88_RS12975 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JCP88_RS12975 IPR008144 Guanylate kinase-like domain JCP88_RS12975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS12975 IPR017665 Guanylate kinase JCP88_RS12975 IPR020590 Guanylate kinase, conserved site JCP88_RS12985 IPR005229 Conserved hypothetical protein CHP00255 JCP88_RS12985 IPR013551 Domain of unknown function DUF1732 JCP88_RS12985 IPR013527 YicC-like, N-terminal JCP88_RS12995 IPR002641 Patatin-like phospholipase domain JCP88_RS12995 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JCP88_RS12995 IPR001423 Lysophospholipase patatin, conserved site JCP88_RS13005 IPR012651 Thiamine transporter ThiT JCP88_RS13010 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site JCP88_RS13010 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JCP88_RS13010 IPR000836 Phosphoribosyltransferase domain JCP88_RS13010 IPR029057 Phosphoribosyltransferase-like JCP88_RS13010 IPR005946 Ribose-phosphate pyrophosphokinase JCP88_RS13010 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type JCP88_RS13015 IPR001451 Hexapeptide repeat JCP88_RS13015 IPR011004 Trimeric LpxA-like superfamily JCP88_RS13015 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS13015 IPR005835 Nucleotidyl transferase domain JCP88_RS13015 IPR038009 GlmU, C-terminal LbH domain JCP88_RS13015 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JCP88_RS13020 IPR000836 Phosphoribosyltransferase domain JCP88_RS13020 IPR029057 Phosphoribosyltransferase-like JCP88_RS13020 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS13020 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS13020 IPR010078 Pur operon repressor JCP88_RS13020 IPR015265 Bacterial purine repressor, N-terminal JCP88_RS13025 IPR037294 ABC transporter, BtuC-like JCP88_RS13025 IPR001626 ABC transporter, TroCD-like JCP88_RS13030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13030 IPR017871 ABC transporter, conserved site JCP88_RS13030 IPR003439 ABC transporter-like JCP88_RS13030 IPR003593 AAA+ ATPase domain JCP88_RS13035 IPR015304 ZinT domain JCP88_RS13035 IPR006127 Periplasmic solute binding protein, ZnuA-like JCP88_RS13035 IPR006128 Adhesion lipoprotein JCP88_RS13035 IPR006129 Adhesin B JCP88_RS13035 IPR012674 Calycin JCP88_RS13045 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JCP88_RS13045 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS13045 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal JCP88_RS13050 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13050 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JCP88_RS13050 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain JCP88_RS13050 IPR000304 Pyrroline-5-carboxylate reductase JCP88_RS13050 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JCP88_RS13060 IPR004088 K Homology domain, type 1 JCP88_RS13060 IPR017705 Ribonuclease Y JCP88_RS13060 IPR003607 HD/PDEase domain JCP88_RS13060 IPR006674 HD domain JCP88_RS13060 IPR022711 Ribonuclease Y, N-terminal JCP88_RS13060 IPR006675 HDIG domain JCP88_RS13060 IPR036612 K Homology domain, type 1 superfamily JCP88_RS13060 IPR004087 K Homology domain JCP88_RS13065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13065 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain JCP88_RS13065 IPR023400 DNA recombination and repair protein RecA, C-terminal JCP88_RS13065 IPR020584 DNA recombination/repair protein RecA, conserved site JCP88_RS13065 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface JCP88_RS13065 IPR003593 AAA+ ATPase domain JCP88_RS13065 IPR013765 DNA recombination and repair protein RecA JCP88_RS13070 IPR001453 MoaB/Mog domain JCP88_RS13070 IPR008136 CinA, C-terminal JCP88_RS13070 IPR041424 CinA, KH domain JCP88_RS13070 IPR008135 Competence-induced protein CinA JCP88_RS13070 IPR036425 MoaB/Mog-like domain superfamily JCP88_RS13070 IPR036653 CinA-like, C-terminal JCP88_RS13075 IPR000462 CDP-alcohol phosphatidyltransferase JCP88_RS13075 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JCP88_RS13080 IPR025194 Domain of unknown function DUF4115 JCP88_RS13080 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS13085 IPR011765 Peptidase M16, N-terminal JCP88_RS13085 IPR007863 Peptidase M16, C-terminal JCP88_RS13085 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JCP88_RS13090 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JCP88_RS13090 IPR007863 Peptidase M16, C-terminal JCP88_RS13095 IPR036019 Gated mechanosensitive channel JCP88_RS13095 IPR001185 Large-conductance mechanosensitive channel JCP88_RS13095 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L JCP88_RS13100 IPR000182 GNAT domain JCP88_RS13100 IPR016181 Acyl-CoA N-acyltransferase JCP88_RS13105 IPR009366 Protein Veg JCP88_RS13115 IPR010298 Protein of unknown function DUF901 JCP88_RS13120 IPR004441 RNA methyltransferase TrmH family JCP88_RS13120 IPR029028 Alpha/beta knot methyltransferases JCP88_RS13120 IPR029064 50S ribosomal protein L30e-like JCP88_RS13120 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JCP88_RS13120 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JCP88_RS13120 IPR001537 tRNA/rRNA methyltransferase, SpoU type JCP88_RS13125 IPR036389 Ribonuclease III, endonuclease domain superfamily JCP88_RS13125 IPR000999 Ribonuclease III domain JCP88_RS13125 IPR008226 Mini-ribonuclease 3 family JCP88_RS13130 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR JCP88_RS13130 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JCP88_RS13130 IPR015803 Cysteine-tRNA ligase JCP88_RS13130 IPR032678 tRNA synthetases class I, catalytic domain JCP88_RS13130 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase JCP88_RS13130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS13135 IPR010493 Serine acetyltransferase, N-terminal JCP88_RS13135 IPR018357 Hexapeptide transferase, conserved site JCP88_RS13135 IPR001451 Hexapeptide repeat JCP88_RS13135 IPR042122 Serine acetyltransferase, N-terminal domain superfamily JCP88_RS13135 IPR011004 Trimeric LpxA-like superfamily JCP88_RS13135 IPR005881 Serine O-acetyltransferase JCP88_RS13140 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JCP88_RS13140 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial JCP88_RS13140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS13140 IPR033910 Glutamyl-tRNA synthetase JCP88_RS13140 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JCP88_RS13140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JCP88_RS13140 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JCP88_RS13140 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JCP88_RS13145 IPR002716 PIN domain JCP88_RS13145 IPR002792 TRAM domain JCP88_RS13145 IPR029060 PIN-like domain superfamily JCP88_RS13150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS13150 IPR003593 AAA+ ATPase domain JCP88_RS13150 IPR004504 DNA repair protein RadA JCP88_RS13150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13150 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS13150 IPR041166 LapB, rubredoxin metal binding domain JCP88_RS13150 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain JCP88_RS13155 IPR033704 dUTPase, trimeric JCP88_RS13155 IPR036157 dUTPase-like superfamily JCP88_RS13155 IPR029054 dUTPase-like JCP88_RS13155 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase JCP88_RS13165 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase JCP88_RS13165 IPR036393 Acetylglutamate kinase-like superfamily JCP88_RS13165 IPR019797 Glutamate 5-kinase, conserved site JCP88_RS13165 IPR001048 Aspartate/glutamate/uridylate kinase JCP88_RS13165 IPR041739 Glutamate-5-kinase domain JCP88_RS13165 IPR001057 Glutamate/acetylglutamate kinase JCP88_RS13165 IPR011529 Glutamate 5-kinase JCP88_RS13170 IPR016161 Aldehyde/histidinol dehydrogenase JCP88_RS13170 IPR016163 Aldehyde dehydrogenase, C-terminal JCP88_RS13170 IPR016162 Aldehyde dehydrogenase, N-terminal JCP88_RS13170 IPR015590 Aldehyde dehydrogenase domain JCP88_RS13170 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site JCP88_RS13170 IPR012134 Glutamate-5-semialdehyde dehydrogenase JCP88_RS13170 IPR000965 GPR domain JCP88_RS13185 IPR036259 MFS transporter superfamily JCP88_RS13185 IPR020846 Major facilitator superfamily domain JCP88_RS13185 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JCP88_RS13185 IPR011701 Major facilitator superfamily JCP88_RS13200 IPR000014 PAS domain JCP88_RS13200 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13200 IPR017871 ABC transporter, conserved site JCP88_RS13200 IPR003439 ABC transporter-like JCP88_RS13200 IPR003593 AAA+ ATPase domain JCP88_RS13205 IPR000415 Nitroreductase-like JCP88_RS13205 IPR029479 Nitroreductase JCP88_RS13215 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS13215 IPR036779 LysM domain superfamily JCP88_RS13215 IPR018392 LysM domain JCP88_RS13220 IPR002347 Short-chain dehydrogenase/reductase SDR JCP88_RS13220 IPR020904 Short-chain dehydrogenase/reductase, conserved site JCP88_RS13220 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13225 IPR001451 Hexapeptide repeat JCP88_RS13225 IPR024688 Maltose/galactoside acetyltransferase JCP88_RS13225 IPR011004 Trimeric LpxA-like superfamily JCP88_RS13225 IPR039369 Galactoside O-acetyltransferase LacA-like JCP88_RS13230 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS13230 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS13230 IPR000847 Transcription regulator HTH, LysR JCP88_RS13230 IPR005119 LysR, substrate-binding JCP88_RS13235 IPR004341 CAT RNA-binding domain JCP88_RS13235 IPR001550 Transcription antiterminator, conserved site JCP88_RS13235 IPR036634 PRD domain superfamily JCP88_RS13235 IPR036650 CAT RNA-binding domain superfamily JCP88_RS13235 IPR011608 PRD domain JCP88_RS13240 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS13240 IPR011055 Duplicated hybrid motif JCP88_RS13240 IPR036878 Glucose permease domain IIB JCP88_RS13240 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS13240 IPR003352 Phosphotransferase system, EIIC JCP88_RS13240 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS13240 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS13240 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component JCP88_RS13245 IPR008030 NmrA-like domain JCP88_RS13245 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13260 IPR011256 Regulatory factor, effector binding domain superfamily JCP88_RS13260 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS13260 IPR020449 Transcription regulator HTH, AraC- type JCP88_RS13260 IPR018062 HTH domain AraC-type, conserved site JCP88_RS13260 IPR009057 Homeobox-like domain superfamily JCP88_RS13260 IPR029442 GyrI-like small molecule binding domain JCP88_RS13260 IPR010499 Bacterial transcription activator, effector binding JCP88_RS13265 IPR001207 Transposase, mutator type JCP88_RS13275 IPR018483 Carbohydrate kinase, FGGY, conserved site JCP88_RS13275 IPR018484 Carbohydrate kinase, FGGY, N-terminal JCP88_RS13275 IPR000577 Carbohydrate kinase, FGGY JCP88_RS13275 IPR018485 Carbohydrate kinase, FGGY, C-terminal JCP88_RS13275 IPR006000 Xylulokinase JCP88_RS13280 IPR004471 Branched-chain amino acid transport, AzlC JCP88_RS13280 IPR011606 Branched-chain amino acid transport, permease JCP88_RS13290 IPR013154 Alcohol dehydrogenase, N-terminal JCP88_RS13290 IPR011032 GroES-like superfamily JCP88_RS13290 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13290 IPR020843 Polyketide synthase, enoylreductase domain JCP88_RS13290 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site JCP88_RS13290 IPR013149 Alcohol dehydrogenase, C-terminal JCP88_RS13290 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 JCP88_RS13295 IPR013785 Aldolase-type TIM barrel JCP88_RS13295 IPR001269 tRNA-dihydrouridine synthase JCP88_RS13295 IPR035587 DUS-like, FMN-binding domain JCP88_RS13295 IPR018517 tRNA-dihydrouridine synthase, conserved site JCP88_RS13300 IPR000412 ABC-2 transporter JCP88_RS13300 IPR013525 ABC-2 type transporter JCP88_RS13305 IPR017871 ABC transporter, conserved site JCP88_RS13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13305 IPR003439 ABC transporter-like JCP88_RS13305 IPR003593 AAA+ ATPase domain JCP88_RS13310 IPR017261 DNA mismatch repair protein MutS/MSH JCP88_RS13310 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JCP88_RS13310 IPR007861 DNA mismatch repair protein MutS, clamp JCP88_RS13310 IPR016151 DNA mismatch repair protein MutS, N-terminal JCP88_RS13310 IPR007696 DNA mismatch repair protein MutS, core JCP88_RS13310 IPR005748 DNA mismatch repair protein MutS JCP88_RS13310 IPR007860 DNA mismatch repair protein MutS, connector domain JCP88_RS13310 IPR036678 MutS, connector domain superfamily JCP88_RS13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13310 IPR000432 DNA mismatch repair protein MutS, C-terminal JCP88_RS13310 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JCP88_RS13315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS13315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS13315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS13315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS13315 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS13315 IPR005467 Histidine kinase domain JCP88_RS13320 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS13320 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS13320 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS13320 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS13320 IPR011006 CheY-like superfamily JCP88_RS13320 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS13330 IPR003439 ABC transporter-like JCP88_RS13330 IPR017871 ABC transporter, conserved site JCP88_RS13330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13330 IPR003593 AAA+ ATPase domain JCP88_RS13360 IPR011663 UbiC transcription regulator-associated JCP88_RS13360 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS13360 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS13360 IPR000524 Transcription regulator HTH, GntR JCP88_RS13360 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS13365 IPR006439 HAD hydrolase, subfamily IA JCP88_RS13365 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS13365 IPR036412 HAD-like superfamily JCP88_RS13365 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS13365 IPR023214 HAD superfamily JCP88_RS13370 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JCP88_RS13375 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JCP88_RS13380 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JCP88_RS13380 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JCP88_RS13385 IPR033887 PTS system mannose/sorbose specific IIA subunit JCP88_RS13385 IPR004701 Phosphotransferase system, mannose-type IIA component JCP88_RS13385 IPR013789 Phosphotransferase system, mannose family IIA component JCP88_RS13385 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily JCP88_RS13390 IPR024713 Fructosamine deglycase FrlB JCP88_RS13390 IPR035490 GlmS/FrlB, SIS domain 2 JCP88_RS13390 IPR001347 Sugar isomerase (SIS) JCP88_RS13390 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 JCP88_RS13435 IPR005094 Endonuclease relaxase, MobA/VirD2 JCP88_RS13495 IPR002543 FtsK domain JCP88_RS13495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13500 IPR000477 Reverse transcriptase domain JCP88_RS13505 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13505 IPR002543 FtsK domain JCP88_RS13530 IPR040819 Rolling Circle replication initiation protein, N-terminal JCP88_RS13530 IPR003491 Replication initiation factor JCP88_RS13540 IPR024937 Domain X JCP88_RS13540 IPR000477 Reverse transcriptase domain JCP88_RS13570 IPR023346 Lysozyme-like domain superfamily JCP88_RS13570 IPR000064 Endopeptidase, NLPC/P60 domain JCP88_RS13570 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS13595 IPR020846 Major facilitator superfamily domain JCP88_RS13595 IPR036259 MFS transporter superfamily JCP88_RS13595 IPR011701 Major facilitator superfamily JCP88_RS13595 IPR004638 Drug resistance transporter EmrB-like JCP88_RS13605 IPR038765 Papain-like cysteine peptidase superfamily JCP88_RS13605 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JCP88_RS13605 IPR007921 CHAP domain JCP88_RS13610 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS13610 IPR023753 FAD/NAD(P)-binding domain JCP88_RS13610 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS13610 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS13615 IPR038544 ACP, N-terminal domain superfamily JCP88_RS13615 IPR035327 AlphaC, C-terminal JCP88_RS13615 IPR038335 ACP, C-terminal domain superfamily JCP88_RS13615 IPR014933 Alpha C protein, N-terminal JCP88_RS13615 IPR019948 Gram-positive LPXTG cell wall anchor JCP88_RS13615 IPR019931 LPXTG cell wall anchor domain JCP88_RS13615 IPR012706 Rib/alpha/Esp surface antigen JCP88_RS13615 IPR005877 YSIRK Gram-positive signal peptide JCP88_RS13615 IPR019950 M protein-type anchor domain JCP88_RS13625 IPR009057 Homeobox-like domain superfamily JCP88_RS13625 IPR018060 DNA binding HTH domain, AraC-type JCP88_RS13625 IPR011256 Regulatory factor, effector binding domain superfamily JCP88_RS13625 IPR020449 Transcription regulator HTH, AraC- type JCP88_RS13655 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JCP88_RS13655 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JCP88_RS13655 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13675 IPR006129 Adhesin B JCP88_RS13675 IPR006127 Periplasmic solute binding protein, ZnuA-like JCP88_RS13675 IPR012674 Calycin JCP88_RS13675 IPR006128 Adhesion lipoprotein JCP88_RS13675 IPR015304 ZinT domain JCP88_RS13685 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JCP88_RS13685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13685 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW JCP88_RS13685 IPR036627 CobW-like, C-terminal domain superfamily JCP88_RS13685 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JCP88_RS13690 IPR001705 Ribosomal protein L33 JCP88_RS13690 IPR018264 Ribosomal protein L33, conserved site JCP88_RS13690 IPR038584 Ribosomal protein L33 superfamily JCP88_RS13690 IPR011332 Zinc-binding ribosomal protein JCP88_RS13700 IPR011332 Zinc-binding ribosomal protein JCP88_RS13700 IPR002677 Ribosomal protein L32p JCP88_RS13705 IPR023036 Ribosomal protein S14, bacterial/plastid JCP88_RS13705 IPR001209 Ribosomal protein S14 JCP88_RS13710 IPR003593 AAA+ ATPase domain JCP88_RS13710 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS13710 IPR017871 ABC transporter, conserved site JCP88_RS13710 IPR011917 ABC transporter, lipid A export, MsbA JCP88_RS13710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13710 IPR003439 ABC transporter-like JCP88_RS13710 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS13710 IPR039421 Type I protein exporter JCP88_RS13715 IPR017871 ABC transporter, conserved site JCP88_RS13715 IPR011917 ABC transporter, lipid A export, MsbA JCP88_RS13715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13715 IPR039421 Type I protein exporter JCP88_RS13715 IPR003439 ABC transporter-like JCP88_RS13715 IPR003593 AAA+ ATPase domain JCP88_RS13715 IPR011527 ABC transporter type 1, transmembrane domain JCP88_RS13715 IPR036640 ABC transporter type 1, transmembrane domain superfamily JCP88_RS13725 IPR003439 ABC transporter-like JCP88_RS13725 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13725 IPR003593 AAA+ ATPase domain JCP88_RS13725 IPR017871 ABC transporter, conserved site JCP88_RS13735 IPR001647 DNA-binding HTH domain, TetR-type JCP88_RS13735 IPR009057 Homeobox-like domain superfamily JCP88_RS13735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JCP88_RS13745 IPR006128 Adhesion lipoprotein JCP88_RS13745 IPR006129 Adhesin B JCP88_RS13745 IPR006127 Periplasmic solute binding protein, ZnuA-like JCP88_RS13750 IPR001626 ABC transporter, TroCD-like JCP88_RS13750 IPR037294 ABC transporter, BtuC-like JCP88_RS13760 IPR003593 AAA+ ATPase domain JCP88_RS13760 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13760 IPR017871 ABC transporter, conserved site JCP88_RS13760 IPR003439 ABC transporter-like JCP88_RS13770 IPR011932 Tyrosine recombinase XerD JCP88_RS13770 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS13770 IPR023009 Tyrosine recombinase XerC/XerD JCP88_RS13770 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS13770 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS13770 IPR002104 Integrase, catalytic domain JCP88_RS13770 IPR010998 Integrase/recombinase, N-terminal JCP88_RS13775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS13775 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS13775 IPR023035 Ribosomal protein S9, bacterial/plastid JCP88_RS13775 IPR000754 Ribosomal protein S9 JCP88_RS13775 IPR020574 Ribosomal protein S9, conserved site JCP88_RS13780 IPR023563 Ribosomal protein L13, conserved site JCP88_RS13780 IPR036899 Ribosomal protein L13 superfamily JCP88_RS13780 IPR005823 Ribosomal protein L13, bacterial-type JCP88_RS13780 IPR005822 Ribosomal protein L13 JCP88_RS13785 IPR008331 Ferritin/DPS protein domain JCP88_RS13785 IPR012347 Ferritin-like JCP88_RS13785 IPR023188 DNA-binding protein Dps, conserved site JCP88_RS13785 IPR002177 DNA-binding protein Dps JCP88_RS13785 IPR009078 Ferritin-like superfamily JCP88_RS13790 IPR018483 Carbohydrate kinase, FGGY, conserved site JCP88_RS13790 IPR000577 Carbohydrate kinase, FGGY JCP88_RS13790 IPR018485 Carbohydrate kinase, FGGY, C-terminal JCP88_RS13790 IPR006002 Gluconate kinase JCP88_RS13790 IPR018484 Carbohydrate kinase, FGGY, N-terminal JCP88_RS13795 IPR000045 Prepilin type IV endopeptidase, peptidase domain JCP88_RS13795 IPR010627 Peptidase A24A, N-terminal JCP88_RS13800 IPR002569 Peptide methionine sulphoxide reductase MsrA JCP88_RS13800 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JCP88_RS13805 IPR006439 HAD hydrolase, subfamily IA JCP88_RS13805 IPR041492 Haloacid dehalogenase-like hydrolase JCP88_RS13805 IPR023214 HAD superfamily JCP88_RS13805 IPR036412 HAD-like superfamily JCP88_RS13805 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JCP88_RS13805 IPR010976 Beta-phosphoglucomutase hydrolase JCP88_RS13805 IPR010972 Beta-phosphoglucomutase JCP88_RS13810 IPR018193 Glycerate kinase, flavodoxin-like fold JCP88_RS13810 IPR004381 Glycerate kinase JCP88_RS13810 IPR018197 Glycerate kinase, restriction-enzyme-like fold JCP88_RS13810 IPR036129 Glycerate kinase superfamily JCP88_RS13815 IPR005195 Glycoside hydrolase, family 65, central catalytic JCP88_RS13815 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase JCP88_RS13815 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JCP88_RS13815 IPR008928 Six-hairpin glycosidase superfamily JCP88_RS13815 IPR012341 Six-hairpin glycosidase-like superfamily JCP88_RS13815 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS13815 IPR005196 Glycoside hydrolase, family 65, N-terminal JCP88_RS13815 IPR005194 Glycoside hydrolase family 65, C-terminal JCP88_RS13820 IPR000683 Oxidoreductase, N-terminal JCP88_RS13820 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13820 IPR004104 Oxidoreductase, C-terminal JCP88_RS13825 IPR013022 Xylose isomerase-like, TIM barrel domain JCP88_RS13825 IPR036237 Xylose isomerase-like superfamily JCP88_RS13830 IPR036291 NAD(P)-binding domain superfamily JCP88_RS13830 IPR011032 GroES-like superfamily JCP88_RS13830 IPR013149 Alcohol dehydrogenase, C-terminal JCP88_RS13835 IPR035906 MetI-like superfamily JCP88_RS13835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS13840 IPR035906 MetI-like superfamily JCP88_RS13840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS13845 IPR006059 Bacterial extracellular solute-binding protein JCP88_RS13850 IPR033746 Glucosylglycerate phosphorylase JCP88_RS13850 IPR017853 Glycoside hydrolase superfamily JCP88_RS13850 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related JCP88_RS13850 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JCP88_RS13855 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS13855 IPR028082 Periplasmic binding protein-like I JCP88_RS13855 IPR001761 Periplasmic binding protein/LacI sugar binding domain JCP88_RS13855 IPR000843 LacI-type HTH domain JCP88_RS13860 IPR012754 DNA-directed RNA polymerase, subunit beta-prime JCP88_RS13860 IPR042102 RNA polymerase Rpb1, domain 3 superfamily JCP88_RS13860 IPR038120 RNA polymerase Rpb1, funnel domain superfamily JCP88_RS13860 IPR007081 RNA polymerase Rpb1, domain 5 JCP88_RS13860 IPR006592 RNA polymerase, N-terminal JCP88_RS13860 IPR007080 RNA polymerase Rpb1, domain 1 JCP88_RS13860 IPR007083 RNA polymerase Rpb1, domain 4 JCP88_RS13860 IPR000722 RNA polymerase, alpha subunit JCP88_RS13860 IPR007066 RNA polymerase Rpb1, domain 3 JCP88_RS13865 IPR014724 RNA polymerase Rpb2, OB-fold JCP88_RS13865 IPR015712 DNA-directed RNA polymerase, subunit 2 JCP88_RS13865 IPR007645 RNA polymerase Rpb2, domain 3 JCP88_RS13865 IPR007641 RNA polymerase Rpb2, domain 7 JCP88_RS13865 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JCP88_RS13865 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain JCP88_RS13865 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily JCP88_RS13865 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type JCP88_RS13865 IPR007121 RNA polymerase, beta subunit, conserved site JCP88_RS13865 IPR007644 RNA polymerase, beta subunit, protrusion JCP88_RS13865 IPR007642 RNA polymerase Rpb2, domain 2 JCP88_RS13865 IPR037034 RNA polymerase Rpb2, domain 2 superfamily JCP88_RS13875 IPR001851 ABC transporter, permease JCP88_RS13880 IPR003593 AAA+ ATPase domain JCP88_RS13880 IPR003439 ABC transporter-like JCP88_RS13880 IPR017871 ABC transporter, conserved site JCP88_RS13880 IPR012693 ABC transporter, phosphonate import, PhnC JCP88_RS13880 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13885 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS13885 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS13885 IPR008988 Transcriptional repressor, C-terminal JCP88_RS13885 IPR013196 Helix-turn-helix, type 11 JCP88_RS13885 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain JCP88_RS13885 IPR003142 Biotin protein ligase, C-terminal JCP88_RS13885 IPR004409 Biotin operon repressor, helix-turn-helix domain JCP88_RS13885 IPR004408 Biotin--acetyl-CoA-carboxylase ligase JCP88_RS13885 IPR030855 Bifunctional ligase/repressor BirA JCP88_RS13900 IPR000092 Polyprenyl synthetase JCP88_RS13900 IPR008949 Isoprenoid synthase domain superfamily JCP88_RS13900 IPR014119 Heptaprenyl diphosphate synthase component II JCP88_RS13900 IPR033749 Polyprenyl synthetase, conserved site JCP88_RS13920 IPR007329 FMN-binding JCP88_RS13920 IPR017058 Major membrane immunogen, tpp15, predicted JCP88_RS13925 IPR003374 ApbE-like superfamily JCP88_RS13925 IPR042159 Flavin-trafficking protein ApbE JCP88_RS13925 IPR024932 Flavin transferase ApbE JCP88_RS13935 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JCP88_RS13935 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCP88_RS13935 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JCP88_RS13935 IPR023753 FAD/NAD(P)-binding domain JCP88_RS13935 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS13935 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JCP88_RS13935 IPR006322 Glutathione reductase, eukaryote/bacterial JCP88_RS13940 IPR001539 Peptidase U32 JCP88_RS13940 IPR032525 Peptidase family U32, C-terminal JCP88_RS13945 IPR001539 Peptidase U32 JCP88_RS13950 IPR028299 ClpA/B, conserved site 2 JCP88_RS13950 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS13950 IPR003593 AAA+ ATPase domain JCP88_RS13950 IPR036628 Clp, N-terminal domain superfamily JCP88_RS13950 IPR019489 Clp ATPase, C-terminal JCP88_RS13950 IPR003959 ATPase, AAA-type, core JCP88_RS13950 IPR041546 ClpA/ClpB, AAA lid domain JCP88_RS13950 IPR001270 ClpA/B family JCP88_RS13950 IPR001943 UVR domain JCP88_RS13950 IPR018368 ClpA/B, conserved site 1 JCP88_RS13950 IPR004176 Clp, N-terminal JCP88_RS13955 IPR040465 CtsR, N-terminal HTH domain JCP88_RS13955 IPR041902 CtsR, N-terminal domain superfamily JCP88_RS13955 IPR041908 CtsR, C-terminal domain superfamily JCP88_RS13955 IPR041473 CtsR, C-terminal dimerization domain JCP88_RS13955 IPR008463 Transcriptional regulator CtsR JCP88_RS14020 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS14020 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS14020 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS14020 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS14020 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS14020 IPR011006 CheY-like superfamily JCP88_RS14025 IPR029151 Periplasmic sensor-like domain superfamily JCP88_RS14025 IPR035965 PAS domain superfamily JCP88_RS14025 IPR000700 PAS-associated, C-terminal JCP88_RS14025 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS14025 IPR003660 HAMP domain JCP88_RS14025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS14025 IPR005467 Histidine kinase domain JCP88_RS14025 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS14025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS14025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS14025 IPR000014 PAS domain JCP88_RS14030 IPR002317 Serine-tRNA ligase, type1 JCP88_RS14030 IPR033729 Serine-tRNA ligase catalytic core domain JCP88_RS14030 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily JCP88_RS14030 IPR015866 Serine-tRNA synthetase, type1, N-terminal JCP88_RS14030 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JCP88_RS14030 IPR006195 Aminoacyl-tRNA synthetase, class II JCP88_RS14030 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JCP88_RS14035 IPR001093 IMP dehydrogenase/GMP reductase JCP88_RS14035 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JCP88_RS14035 IPR005990 Inosine-5'-monophosphate dehydrogenase JCP88_RS14035 IPR000644 CBS domain JCP88_RS14035 IPR013785 Aldolase-type TIM barrel JCP88_RS14045 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 JCP88_RS14045 IPR012675 Beta-grasp domain superfamily JCP88_RS14045 IPR031167 OBG-type guanine nucleotide-binding (G) domain JCP88_RS14045 IPR006073 GTP binding domain JCP88_RS14045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14045 IPR004095 TGS JCP88_RS14045 IPR041706 YchF, N-terminal JCP88_RS14045 IPR023192 TGS-like domain superfamily JCP88_RS14045 IPR013029 YchF, C-terminal domain JCP88_RS14045 IPR012676 TGS-like JCP88_RS14050 IPR009296 Protein of unknown function DUF951 JCP88_RS14055 IPR003115 ParB/Sulfiredoxin JCP88_RS14055 IPR036086 ParB/Sulfiredoxin superfamily JCP88_RS14055 IPR041468 ParB/Spo0J, HTH domain JCP88_RS14055 IPR004437 ParB/RepB/Spo0J partition protein JCP88_RS14060 IPR025669 AAA domain JCP88_RS14060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14065 IPR003682 rRNA small subunit methyltransferase G JCP88_RS14065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS14070 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS14070 IPR026904 GidA associated domain 3 JCP88_RS14070 IPR020595 MnmG-related, conserved site JCP88_RS14070 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related JCP88_RS14070 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG JCP88_RS14075 IPR005225 Small GTP-binding protein domain JCP88_RS14075 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JCP88_RS14075 IPR004520 tRNA modification GTPase MnmE JCP88_RS14075 IPR006073 GTP binding domain JCP88_RS14075 IPR031168 TrmE-type guanine nucleotide-binding domain JCP88_RS14075 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14075 IPR025867 MnmE, helical domain JCP88_RS14075 IPR027368 tRNA modification GTPase MnmE domain 2 JCP88_RS14075 IPR018948 GTP-binding protein TrmE, N-terminal JCP88_RS14085 IPR038008 Jag, KH domain JCP88_RS14085 IPR032782 Jag, N-terminal JCP88_RS14085 IPR034079 Jag, R3H domain JCP88_RS14085 IPR036867 R3H domain superfamily JCP88_RS14085 IPR001374 R3H domain JCP88_RS14085 IPR004087 K Homology domain JCP88_RS14085 IPR015946 K homology domain-like, alpha/beta JCP88_RS14085 IPR039247 Jag protein JCP88_RS14085 IPR038247 Jag, N-terminal domain superfamily JCP88_RS14090 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 JCP88_RS14090 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes JCP88_RS14090 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JCP88_RS14095 IPR020568 Ribosomal protein S5 domain 2-type fold JCP88_RS14095 IPR020539 Ribonuclease P, conserved site JCP88_RS14095 IPR000100 Ribonuclease P JCP88_RS14095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JCP88_RS14100 IPR020939 Ribosomal protein L34, conserved site JCP88_RS14100 IPR000271 Ribosomal protein L34 JCP88_RS14110 IPR000192 Aminotransferase class V domain JCP88_RS14110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JCP88_RS14110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JCP88_RS14110 IPR015424 Pyridoxal phosphate-dependent transferase JCP88_RS14110 IPR016454 Cysteine desulfurase JCP88_RS14110 IPR010970 Cysteine desulfurase, SufS JCP88_RS14110 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JCP88_RS14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14125 IPR008995 Molybdate/tungstate binding, C-terminal JCP88_RS14125 IPR003439 ABC transporter-like JCP88_RS14125 IPR017871 ABC transporter, conserved site JCP88_RS14125 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JCP88_RS14125 IPR003593 AAA+ ATPase domain JCP88_RS14125 IPR013611 Transport-associated OB, type 2 JCP88_RS14125 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA JCP88_RS14135 IPR035906 MetI-like superfamily JCP88_RS14135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS14150 IPR016195 Polymerase/histidinol phosphatase-like JCP88_RS14150 IPR010140 Histidinol phosphate phosphatase, HisJ JCP88_RS14150 IPR004013 PHP domain JCP88_RS14150 IPR003141 Polymerase/histidinol phosphatase, N-terminal JCP88_RS14170 IPR034457 Organic radical-activating enzymes JCP88_RS14170 IPR012839 Organic radical enzyme activase JCP88_RS14170 IPR001989 Radical-activating enzyme, conserved site JCP88_RS14170 IPR040074 BssD/PflA/YjjW JCP88_RS14170 IPR007197 Radical SAM JCP88_RS14170 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JCP88_RS14170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JCP88_RS14170 IPR013785 Aldolase-type TIM barrel JCP88_RS14185 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14185 IPR003439 ABC transporter-like JCP88_RS14185 IPR003593 AAA+ ATPase domain JCP88_RS14205 IPR013766 Thioredoxin domain JCP88_RS14205 IPR017937 Thioredoxin, conserved site JCP88_RS14205 IPR036249 Thioredoxin-like superfamily JCP88_RS14205 IPR013740 Redoxin JCP88_RS14240 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS14240 IPR002104 Integrase, catalytic domain JCP88_RS14240 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS14245 IPR001207 Transposase, mutator type JCP88_RS14255 IPR001207 Transposase, mutator type JCP88_RS14265 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG JCP88_RS14265 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JCP88_RS14265 IPR002736 Triphosphoribosyl-dephospho-CoA protein JCP88_RS14270 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JCP88_RS14270 IPR002736 Triphosphoribosyl-dephospho-CoA protein JCP88_RS14270 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG JCP88_RS14275 IPR006472 Citrate lyase, alpha subunit JCP88_RS14275 IPR037171 NagB/RpiA transferase-like JCP88_RS14280 IPR005000 HpcH/HpaI aldolase/citrate lyase domain JCP88_RS14280 IPR011206 Citrate lyase beta subunit-like JCP88_RS14280 IPR006475 Citrate lyase, beta subunit, bacteria JCP88_RS14280 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JCP88_RS14280 IPR040442 Pyruvate kinase-like domain superfamily JCP88_RS14285 IPR006495 Citrate lyase acyl carrier protein CitD JCP88_RS14285 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JCP88_RS14290 IPR013166 Citrate lyase ligase, C-terminal JCP88_RS14290 IPR005216 Citrate lyase ligase JCP88_RS14290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS14290 IPR004821 Cytidyltransferase-like domain JCP88_RS14295 IPR004679 2-hydroxycarboxylate transporter JCP88_RS14295 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes JCP88_RS14300 IPR012301 Malic enzyme, N-terminal domain JCP88_RS14300 IPR012302 Malic enzyme, NAD-binding JCP88_RS14300 IPR001891 Malic oxidoreductase JCP88_RS14300 IPR036291 NAD(P)-binding domain superfamily JCP88_RS14300 IPR015884 Malic enzyme, conserved site JCP88_RS14300 IPR037062 Malic enzyme, N-terminal domain superfamily JCP88_RS14330 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JCP88_RS14330 IPR009614 Toxin YoeB JCP88_RS14355 IPR037481 Protein LacX JCP88_RS14355 IPR011013 Galactose mutarotase-like domain superfamily JCP88_RS14355 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JCP88_RS14355 IPR014718 Glycoside hydrolase-type carbohydrate-binding JCP88_RS14365 IPR005928 6-phospho-beta-galactosidase JCP88_RS14365 IPR001360 Glycoside hydrolase family 1 JCP88_RS14365 IPR018120 Glycoside hydrolase family 1, active site JCP88_RS14365 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JCP88_RS14365 IPR017853 Glycoside hydrolase superfamily JCP88_RS14370 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JCP88_RS14370 IPR013012 Phosphotransferase system, EIIB component, type 3 JCP88_RS14370 IPR041713 PTS system lactose-specific EIICB component, IIB domain JCP88_RS14370 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS14370 IPR004801 Phosphotransferase system, lactose-specific IIC component JCP88_RS14370 IPR003352 Phosphotransferase system, EIIC JCP88_RS14370 IPR036095 PTS system IIB component-like superfamily JCP88_RS14375 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JCP88_RS14375 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JCP88_RS14380 IPR002915 DeoC/FbaB/ lacD aldolase JCP88_RS14380 IPR013785 Aldolase-type TIM barrel JCP88_RS14380 IPR005927 Tagatose 1,6-diphosphate aldolase JCP88_RS14385 IPR011611 Carbohydrate kinase PfkB JCP88_RS14385 IPR017583 Tagatose/fructose phosphokinase JCP88_RS14385 IPR029056 Ribokinase-like JCP88_RS14385 IPR005926 Tagatose-6-phosphate kinase JCP88_RS14385 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JCP88_RS14390 IPR004784 Galactose-6-phosphate isomerase subunit LacB JCP88_RS14390 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family JCP88_RS14390 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily JCP88_RS14395 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily JCP88_RS14395 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family JCP88_RS14395 IPR004783 Galactose-6-phosphate isomerase subunit LacA JCP88_RS14400 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS14400 IPR037171 NagB/RpiA transferase-like JCP88_RS14400 IPR001034 DeoR-type HTH domain JCP88_RS14400 IPR014036 DeoR C-terminal sensor domain JCP88_RS14400 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS14400 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JCP88_RS14415 IPR023405 DNA topoisomerase, type IA, core domain JCP88_RS14415 IPR006171 TOPRIM domain JCP88_RS14415 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JCP88_RS14415 IPR023406 DNA topoisomerase, type IA, active site JCP88_RS14415 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JCP88_RS14415 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JCP88_RS14415 IPR003601 DNA topoisomerase, type IA, domain 2 JCP88_RS14415 IPR013497 DNA topoisomerase, type IA, central JCP88_RS14415 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JCP88_RS14415 IPR000380 DNA topoisomerase, type IA JCP88_RS14415 IPR005738 DNA topoisomerase III JCP88_RS14415 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JCP88_RS14435 IPR036397 Ribonuclease H superfamily JCP88_RS14435 IPR012337 Ribonuclease H-like superfamily JCP88_RS14435 IPR001584 Integrase, catalytic core JCP88_RS14435 IPR032874 DDE domain JCP88_RS14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS14455 IPR021961 Protein of unknown function DUF3578 JCP88_RS14455 IPR011704 ATPase, dynein-related, AAA domain JCP88_RS14455 IPR003593 AAA+ ATPase domain JCP88_RS14465 IPR029044 Nucleotide-diphospho-sugar transferases JCP88_RS14465 IPR002495 Glycosyl transferase, family 8 JCP88_RS14475 IPR034964 Lumazine synthase JCP88_RS14475 IPR036467 Lumazine/riboflavin synthase superfamily JCP88_RS14475 IPR002180 Lumazine/riboflavin synthase JCP88_RS14480 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS14480 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS14480 IPR012318 Crp-type HTH domain JCP88_RS14480 IPR000595 Cyclic nucleotide-binding domain JCP88_RS14480 IPR018490 Cyclic nucleotide-binding-like JCP88_RS14480 IPR018335 Transcription regulator HTH, Crp-type, conserved site JCP88_RS14480 IPR014710 RmlC-like jelly roll fold JCP88_RS14485 IPR004465 Ribonucleotide reductase Class Ib, NrdI JCP88_RS14485 IPR029039 Flavoprotein-like superfamily JCP88_RS14500 IPR034084 Thermitase-like, domain JCP88_RS14500 IPR015500 Peptidase S8, subtilisin-related JCP88_RS14500 IPR022398 Peptidase S8, subtilisin, His-active site JCP88_RS14500 IPR023827 Peptidase S8, subtilisin, Asp-active site JCP88_RS14500 IPR036852 Peptidase S8/S53 domain superfamily JCP88_RS14500 IPR000209 Peptidase S8/S53 domain JCP88_RS14500 IPR023828 Peptidase S8, subtilisin, Ser-active site JCP88_RS14505 IPR022398 Peptidase S8, subtilisin, His-active site JCP88_RS14505 IPR025965 FlgD Ig-like domain JCP88_RS14505 IPR003137 PA domain JCP88_RS14505 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily JCP88_RS14505 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 JCP88_RS14505 IPR034213 Vpr-like peptidase, catalytic domain JCP88_RS14505 IPR015500 Peptidase S8, subtilisin-related JCP88_RS14505 IPR023828 Peptidase S8, subtilisin, Ser-active site JCP88_RS14505 IPR000209 Peptidase S8/S53 domain JCP88_RS14505 IPR023827 Peptidase S8, subtilisin, Asp-active site JCP88_RS14505 IPR036852 Peptidase S8/S53 domain superfamily JCP88_RS14530 IPR032874 DDE domain JCP88_RS14530 IPR001584 Integrase, catalytic core JCP88_RS14530 IPR012337 Ribonuclease H-like superfamily JCP88_RS14530 IPR036397 Ribonuclease H superfamily JCP88_RS14545 IPR000600 ROK family JCP88_RS14550 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JCP88_RS14550 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JCP88_RS14550 IPR001362 Glycoside hydrolase, family 32 JCP88_RS14550 IPR006232 Sucrose-6-phosphate hydrolase JCP88_RS14550 IPR018053 Glycoside hydrolase, family 32, active site JCP88_RS14550 IPR013189 Glycosyl hydrolase family 32, C-terminal JCP88_RS14550 IPR013148 Glycosyl hydrolase family 32, N-terminal JCP88_RS14555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS14555 IPR035906 MetI-like superfamily JCP88_RS14560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JCP88_RS14560 IPR035906 MetI-like superfamily JCP88_RS14570 IPR000843 LacI-type HTH domain JCP88_RS14570 IPR028082 Periplasmic binding protein-like I JCP88_RS14570 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS14585 IPR006120 Resolvase, HTH domain JCP88_RS14585 IPR006118 Recombinase, conserved site JCP88_RS14585 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS14585 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS14610 IPR036397 Ribonuclease H superfamily JCP88_RS14610 IPR012337 Ribonuclease H-like superfamily JCP88_RS14610 IPR005987 Ribonuclease T JCP88_RS14610 IPR013520 Exonuclease, RNase T/DNA polymerase III JCP88_RS14630 IPR032874 DDE domain JCP88_RS14630 IPR001584 Integrase, catalytic core JCP88_RS14630 IPR012337 Ribonuclease H-like superfamily JCP88_RS14630 IPR036397 Ribonuclease H superfamily JCP88_RS14635 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JCP88_RS14635 IPR010960 Flavocytochrome c JCP88_RS14635 IPR029039 Flavoprotein-like superfamily JCP88_RS14635 IPR007329 FMN-binding JCP88_RS14635 IPR005025 NADPH-dependent FMN reductase-like JCP88_RS14635 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JCP88_RS14635 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS14640 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JCP88_RS14640 IPR036188 FAD/NAD(P)-binding domain superfamily JCP88_RS14640 IPR029039 Flavoprotein-like superfamily JCP88_RS14640 IPR010960 Flavocytochrome c JCP88_RS14640 IPR005025 NADPH-dependent FMN reductase-like JCP88_RS14640 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JCP88_RS14640 IPR007329 FMN-binding JCP88_RS14645 IPR024932 Flavin transferase ApbE JCP88_RS14645 IPR003374 ApbE-like superfamily JCP88_RS14645 IPR042159 Flavin-trafficking protein ApbE JCP88_RS14655 IPR036397 Ribonuclease H superfamily JCP88_RS14655 IPR032874 DDE domain JCP88_RS14655 IPR001584 Integrase, catalytic core JCP88_RS14655 IPR012337 Ribonuclease H-like superfamily JCP88_RS14665 IPR032874 DDE domain JCP88_RS14665 IPR001584 Integrase, catalytic core JCP88_RS14665 IPR012337 Ribonuclease H-like superfamily JCP88_RS14665 IPR036397 Ribonuclease H superfamily JCP88_RS14685 IPR001959 Probable transposase, IS891/IS1136/IS1341 JCP88_RS14685 IPR010095 Transposase IS605, OrfB, C-terminal JCP88_RS14685 IPR021027 Transposase, putative, helix-turn-helix domain JCP88_RS14715 IPR035387 Protein of unknown function DUF5406 JCP88_RS14725 IPR041045 Large polyvalent protein associated domain 25 JCP88_RS14730 IPR025054 Domain of unknown function DUF3991 JCP88_RS14755 IPR011344 Single-stranded DNA-binding protein JCP88_RS14755 IPR000424 Primosome PriB/single-strand DNA-binding JCP88_RS14755 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS14760 IPR000424 Primosome PriB/single-strand DNA-binding JCP88_RS14760 IPR011344 Single-stranded DNA-binding protein JCP88_RS14760 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS14815 IPR009086 Bacteriocin AS-48 JCP88_RS14815 IPR020038 Circular bacteriocin, circularin A/uberolysin family JCP88_RS14820 IPR001207 Transposase, mutator type JCP88_RS14840 IPR013853 Galactitol permease IIC component JCP88_RS14840 IPR013014 Phosphotransferase system, EIIC component, type 2 JCP88_RS14840 IPR004703 Phosphotransferase system, sugar-specific permease component JCP88_RS14855 IPR000056 Ribulose-phosphate 3-epimerase-like JCP88_RS14855 IPR011060 Ribulose-phosphate binding barrel JCP88_RS14855 IPR026019 Ribulose-phosphate 3-epimerase JCP88_RS14855 IPR013785 Aldolase-type TIM barrel JCP88_RS14865 IPR024474 Zinc-finger binding domain of transposase IS66 JCP88_RS14865 IPR024463 Transposase TnpC, homeodomain JCP88_RS14865 IPR004291 Transposase, IS66 JCP88_RS14865 IPR039552 Transposase IS66, C-terminal JCP88_RS14880 IPR024474 Zinc-finger binding domain of transposase IS66 JCP88_RS14880 IPR024463 Transposase TnpC, homeodomain JCP88_RS14880 IPR039552 Transposase IS66, C-terminal JCP88_RS14880 IPR004291 Transposase, IS66 JCP88_RS14915 IPR000600 ROK family JCP88_RS14920 IPR036878 Glucose permease domain IIB JCP88_RS14920 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS14920 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS14920 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS14920 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS14920 IPR003352 Phosphotransferase system, EIIC JCP88_RS14920 IPR010973 Phosphotransferase system, sucrose-specific IIBC component JCP88_RS14920 IPR011055 Duplicated hybrid motif JCP88_RS14925 IPR018053 Glycoside hydrolase, family 32, active site JCP88_RS14925 IPR013189 Glycosyl hydrolase family 32, C-terminal JCP88_RS14925 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JCP88_RS14925 IPR006232 Sucrose-6-phosphate hydrolase JCP88_RS14925 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily JCP88_RS14925 IPR013148 Glycosyl hydrolase family 32, N-terminal JCP88_RS14925 IPR001362 Glycoside hydrolase, family 32 JCP88_RS14930 IPR028082 Periplasmic binding protein-like I JCP88_RS14930 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JCP88_RS14930 IPR000843 LacI-type HTH domain JCP88_RS14940 IPR002686 Transposase IS200-like JCP88_RS14940 IPR036515 Transposase IS200-like superfamily JCP88_RS14950 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS14950 IPR006118 Recombinase, conserved site JCP88_RS14950 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS14950 IPR006120 Resolvase, HTH domain JCP88_RS14955 IPR000281 Helix-turn-helix protein RpiR JCP88_RS14955 IPR009057 Homeobox-like domain superfamily JCP88_RS14955 IPR035472 RpiR-like, SIS domain JCP88_RS14955 IPR001347 Sugar isomerase (SIS) JCP88_RS14955 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS14960 IPR013785 Aldolase-type TIM barrel JCP88_RS14960 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase JCP88_RS14960 IPR011060 Ribulose-phosphate binding barrel JCP88_RS14965 IPR011299 PTS system glucose-specific IIBC component JCP88_RS14965 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS14965 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS14965 IPR003352 Phosphotransferase system, EIIC JCP88_RS14965 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS14965 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS14965 IPR036878 Glucose permease domain IIB JCP88_RS14965 IPR011055 Duplicated hybrid motif JCP88_RS14970 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JCP88_RS14970 IPR011300 Phosphotransferase system, IIBC component JCP88_RS14970 IPR003352 Phosphotransferase system, EIIC JCP88_RS14970 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JCP88_RS14970 IPR001996 Phosphotransferase system, IIB component, type 1 JCP88_RS14970 IPR013013 Phosphotransferase system, EIIC component, type 1 JCP88_RS14970 IPR011055 Duplicated hybrid motif JCP88_RS14970 IPR036878 Glucose permease domain IIB JCP88_RS14990 IPR004107 Integrase, SAM-like, N-terminal JCP88_RS14990 IPR010998 Integrase/recombinase, N-terminal JCP88_RS14990 IPR002104 Integrase, catalytic domain JCP88_RS14990 IPR013762 Integrase-like, catalytic domain superfamily JCP88_RS14990 IPR011010 DNA breaking-rejoining enzyme, catalytic core JCP88_RS14990 IPR023670 Tyrosine recombinase XerS JCP88_RS15000 IPR003352 Phosphotransferase system, EIIC JCP88_RS15000 IPR004796 Phosphotransferase system, cellobiose-type IIC component JCP88_RS15000 IPR004501 Phosphotransferase system, EIIC component, type 3 JCP88_RS15010 IPR013785 Aldolase-type TIM barrel JCP88_RS15010 IPR005927 Tagatose 1,6-diphosphate aldolase JCP88_RS15010 IPR002915 DeoC/FbaB/ lacD aldolase JCP88_RS15015 IPR001347 Sugar isomerase (SIS) JCP88_RS15015 IPR035466 GlmS/AgaS, SIS domain 1 JCP88_RS15015 IPR014180 Sugar isomerase, AgaS JCP88_RS15015 IPR035464 AgaS, SIS domain JCP88_RS15020 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS15020 IPR011663 UbiC transcription regulator-associated JCP88_RS15020 IPR000524 Transcription regulator HTH, GntR JCP88_RS15020 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JCP88_RS15020 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS15030 IPR001207 Transposase, mutator type JCP88_RS15040 IPR001207 Transposase, mutator type JCP88_RS15055 IPR009010 Aspartate decarboxylase-like domain superfamily JCP88_RS15055 IPR003190 Aspartate decarboxylase JCP88_RS15060 IPR004821 Cytidyltransferase-like domain JCP88_RS15060 IPR003721 Pantoate-beta-alanine ligase JCP88_RS15060 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain JCP88_RS15060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JCP88_RS15065 IPR040442 Pyruvate kinase-like domain superfamily JCP88_RS15065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JCP88_RS15065 IPR003700 Ketopantoate hydroxymethyltransferase JCP88_RS15085 IPR024474 Zinc-finger binding domain of transposase IS66 JCP88_RS15085 IPR024463 Transposase TnpC, homeodomain JCP88_RS15085 IPR039552 Transposase IS66, C-terminal JCP88_RS15085 IPR004291 Transposase, IS66 JCP88_RS15090 IPR001207 Transposase, mutator type JCP88_RS15095 IPR032874 DDE domain JCP88_RS15095 IPR001584 Integrase, catalytic core JCP88_RS15095 IPR012337 Ribonuclease H-like superfamily JCP88_RS15095 IPR036397 Ribonuclease H superfamily JCP88_RS15100 IPR001207 Transposase, mutator type JCP88_RS15140 IPR012337 Ribonuclease H-like superfamily JCP88_RS15140 IPR001584 Integrase, catalytic core JCP88_RS15140 IPR032874 DDE domain JCP88_RS15140 IPR036397 Ribonuclease H superfamily JCP88_RS15145 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15145 IPR006120 Resolvase, HTH domain JCP88_RS15145 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15145 IPR006118 Recombinase, conserved site JCP88_RS15155 IPR001357 BRCT domain JCP88_RS15155 IPR036420 BRCT domain superfamily JCP88_RS15155 IPR041663 DisA/LigA, helix-hairpin-helix motif JCP88_RS15155 IPR033136 NAD-dependent DNA ligase, conserved site JCP88_RS15155 IPR001679 NAD-dependent DNA ligase JCP88_RS15155 IPR013839 NAD-dependent DNA ligase, adenylation JCP88_RS15155 IPR004150 NAD-dependent DNA ligase, OB-fold JCP88_RS15155 IPR010994 RuvA domain 2-like JCP88_RS15155 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type JCP88_RS15155 IPR013840 NAD-dependent DNA ligase, N-terminal JCP88_RS15155 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS15160 IPR009057 Homeobox-like domain superfamily JCP88_RS15160 IPR006118 Recombinase, conserved site JCP88_RS15160 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15160 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15160 IPR006120 Resolvase, HTH domain JCP88_RS15170 IPR015020 Protein of unknown function DUF1906 JCP88_RS15170 IPR017853 Glycoside hydrolase superfamily JCP88_RS15170 IPR002477 Peptidoglycan binding-like JCP88_RS15170 IPR036365 PGBD-like superfamily JCP88_RS15170 IPR036366 PGBD superfamily JCP88_RS15195 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS15195 IPR011006 CheY-like superfamily JCP88_RS15195 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS15195 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS15195 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS15195 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS15255 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS15280 IPR032689 TraD/TraG, TraM recognition site JCP88_RS15330 IPR005754 Sortase family JCP88_RS15330 IPR042007 Sortase A JCP88_RS15330 IPR023365 Sortase domain superfamily JCP88_RS15365 IPR035387 Protein of unknown function DUF5406 JCP88_RS15390 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS15390 IPR025669 AAA domain JCP88_RS15410 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JCP88_RS15410 IPR017961 DNA polymerase, Y-family, little finger domain JCP88_RS15410 IPR024728 DNA polymerase type-Y, HhH motif JCP88_RS15410 IPR001126 UmuC domain JCP88_RS15415 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15415 IPR006120 Resolvase, HTH domain JCP88_RS15415 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15415 IPR006118 Recombinase, conserved site JCP88_RS15415 IPR009057 Homeobox-like domain superfamily JCP88_RS15430 IPR006120 Resolvase, HTH domain JCP88_RS15430 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15430 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15430 IPR006118 Recombinase, conserved site JCP88_RS15445 IPR021027 Transposase, putative, helix-turn-helix domain JCP88_RS15445 IPR010095 Transposase IS605, OrfB, C-terminal JCP88_RS15445 IPR001959 Probable transposase, IS891/IS1136/IS1341 JCP88_RS15480 IPR012340 Nucleic acid-binding, OB-fold JCP88_RS15480 IPR000424 Primosome PriB/single-strand DNA-binding JCP88_RS15480 IPR011344 Single-stranded DNA-binding protein JCP88_RS15505 IPR025054 Domain of unknown function DUF3991 JCP88_RS15510 IPR041045 Large polyvalent protein associated domain 25 JCP88_RS15520 IPR010724 Replication initiator A, N-terminal JCP88_RS15520 IPR041151 Replication initiator protein A, C-terminal domain JCP88_RS15525 IPR036397 Ribonuclease H superfamily JCP88_RS15525 IPR032874 DDE domain JCP88_RS15525 IPR012337 Ribonuclease H-like superfamily JCP88_RS15525 IPR001584 Integrase, catalytic core JCP88_RS15530 IPR009391 23S rRNA methylase leader peptide JCP88_RS15535 IPR023165 rRNA adenine dimethylase-like JCP88_RS15535 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JCP88_RS15535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS15535 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JCP88_RS15535 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JCP88_RS15560 IPR013216 Methyltransferase type 11 JCP88_RS15560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JCP88_RS15570 IPR012337 Ribonuclease H-like superfamily JCP88_RS15570 IPR001584 Integrase, catalytic core JCP88_RS15570 IPR032874 DDE domain JCP88_RS15570 IPR036397 Ribonuclease H superfamily JCP88_RS15580 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS15580 IPR001789 Signal transduction response regulator, receiver domain JCP88_RS15580 IPR001867 OmpR/PhoB-type DNA-binding domain JCP88_RS15580 IPR011006 CheY-like superfamily JCP88_RS15580 IPR016032 Signal transduction response regulator, C-terminal effector JCP88_RS15580 IPR039420 Transcriptional regulatory protein WalR-like JCP88_RS15585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JCP88_RS15585 IPR003594 Histidine kinase/HSP90-like ATPase JCP88_RS15585 IPR005467 Histidine kinase domain JCP88_RS15585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JCP88_RS15585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JCP88_RS15585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JCP88_RS15590 IPR012337 Ribonuclease H-like superfamily JCP88_RS15590 IPR001584 Integrase, catalytic core JCP88_RS15590 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JCP88_RS15595 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JCP88_RS15595 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JCP88_RS15595 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCP88_RS15595 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JCP88_RS15595 IPR036291 NAD(P)-binding domain superfamily JCP88_RS15600 IPR013815 ATP-grasp fold, subdomain 1 JCP88_RS15600 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JCP88_RS15600 IPR005905 D-alanine--D-alanine ligase JCP88_RS15600 IPR011095 D-alanine--D-alanine ligase, C-terminal JCP88_RS15600 IPR011761 ATP-grasp fold JCP88_RS15600 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JCP88_RS15600 IPR016185 Pre-ATP-grasp domain superfamily JCP88_RS15605 IPR000755 D-alanyl-D-alanine dipeptidase JCP88_RS15605 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JCP88_RS15610 IPR036397 Ribonuclease H superfamily JCP88_RS15610 IPR001584 Integrase, catalytic core JCP88_RS15610 IPR012337 Ribonuclease H-like superfamily JCP88_RS15610 IPR032874 DDE domain JCP88_RS15615 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JCP88_RS15615 IPR003709 Peptidase M15B JCP88_RS15620 IPR006976 VanZ-like JCP88_RS15625 IPR001845 HTH ArsR-type DNA-binding domain JCP88_RS15625 IPR036390 Winged helix DNA-binding domain superfamily JCP88_RS15625 IPR011991 ArsR-like helix-turn-helix domain JCP88_RS15625 IPR018334 ArsR-type transcription regulator, HTH motif JCP88_RS15625 IPR036388 Winged helix-like DNA-binding domain superfamily JCP88_RS15640 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15640 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15640 IPR006118 Recombinase, conserved site JCP88_RS15640 IPR006120 Resolvase, HTH domain JCP88_RS15660 IPR032874 DDE domain JCP88_RS15660 IPR001584 Integrase, catalytic core JCP88_RS15660 IPR012337 Ribonuclease H-like superfamily JCP88_RS15660 IPR036397 Ribonuclease H superfamily JCP88_RS15695 IPR036397 Ribonuclease H superfamily JCP88_RS15695 IPR012337 Ribonuclease H-like superfamily JCP88_RS15695 IPR001584 Integrase, catalytic core JCP88_RS15695 IPR032874 DDE domain JCP88_RS15715 IPR009614 Toxin YoeB JCP88_RS15715 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JCP88_RS15725 IPR006118 Recombinase, conserved site JCP88_RS15725 IPR006119 Resolvase, N-terminal catalytic domain JCP88_RS15725 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JCP88_RS15725 IPR006120 Resolvase, HTH domain JCP88_RS15730 IPR017961 DNA polymerase, Y-family, little finger domain JCP88_RS15730 IPR024728 DNA polymerase type-Y, HhH motif JCP88_RS15730 IPR001126 UmuC domain JCP88_RS15730 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JCP88_RS15755 IPR027417 P-loop containing nucleoside triphosphate hydrolase JCP88_RS15755 IPR025669 AAA domain JCP88_RS15780 IPR023384 Bacteriocin, class IIa, conserved site JCP88_RS15780 IPR002633 Bacteriocin, class IIa JCP88_RS15785 IPR023130 Ta0600-like superfamily JCP88_RS15785 IPR015046 Enterocin A Immunity JCP88_RS15795 IPR005094 Endonuclease relaxase, MobA/VirD2 JCP88_RS15825 IPR000989 Replication protein JCP88_RS15840 IPR000989 Replication protein JCP88_RS15855 IPR003491 Replication initiation factor