locus-tag class description EWM55_RS00040 PF04002 RadC-like JAB domain EWM55_RS00155 PF09397 Ftsk gamma domain EWM55_RS00155 PF17854 FtsK alpha domain EWM55_RS00155 PF01580 FtsK/SpoIIIE family EWM55_RS00190 PF04203 Sortase domain EWM55_RS00315 PF00872 Transposase, Mutator family EWM55_RS00370 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS00370 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS00370 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS00370 PF17871 AAA lid domain EWM55_RS00390 PF00872 Transposase, Mutator family EWM55_RS00420 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system EWM55_RS00515 PF03432 Relaxase/Mobilisation nuclease domain EWM55_RS00545 PF01446 Replication protein EWM55_RS00585 PF00308 Bacterial dnaA protein EWM55_RS00585 PF08299 Bacterial dnaA protein helix-turn-helix EWM55_RS00590 PF00712 DNA polymerase III beta subunit, N-terminal domain EWM55_RS00590 PF02768 DNA polymerase III beta subunit, C-terminal domain EWM55_RS00590 PF02767 DNA polymerase III beta subunit, central domain EWM55_RS00600 PF02463 RecF/RecN/SMC N terminal domain EWM55_RS00605 PF01751 Toprim domain EWM55_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS00605 PF00204 DNA gyrase B EWM55_RS00605 PF00986 DNA gyrase B subunit, carboxyl terminus EWM55_RS00610 PF00521 DNA gyrase/topoisomerase IV, subunit A EWM55_RS00610 PF03989 DNA gyrase C-terminal domain, beta-propeller EWM55_RS00615 PF01250 Ribosomal protein S6 EWM55_RS00620 PF00436 Single-strand binding protein family EWM55_RS00625 PF01084 Ribosomal protein S18 EWM55_RS00630 PF02272 DHHA1 domain EWM55_RS00630 PF01368 DHH family EWM55_RS00635 PF01281 Ribosomal protein L9, N-terminal domain EWM55_RS00635 PF03948 Ribosomal protein L9, C-terminal domain EWM55_RS00640 PF00772 DnaB-like helicase N terminal domain EWM55_RS00640 PF03796 DnaB-like helicase C terminal domain EWM55_RS00645 PF00709 Adenylosuccinate synthetase EWM55_RS00650 PF02645 Uncharacterised protein, DegV family COG1307 EWM55_RS00655 PF12848 ABC transporter EWM55_RS00655 PF00005 ABC transporter EWM55_RS00665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EWM55_RS00665 PF00205 Thiamine pyrophosphate enzyme, central domain EWM55_RS00665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EWM55_RS00670 PF02535 ZIP Zinc transporter EWM55_RS00680 PF06736 Protein of unknown function (DUF1211) EWM55_RS00685 PF04892 VanZ like family EWM55_RS00735 PF00455 DeoR C terminal sensor domain EWM55_RS00735 PF08220 DeoR-like helix-turn-helix domain EWM55_RS00740 PF00232 Glycosyl hydrolase family 1 EWM55_RS00745 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EWM55_RS00750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS00750 PF02378 Phosphotransferase system, EIIC EWM55_RS00755 PF07745 Glycosyl hydrolase family 53 EWM55_RS00770 PF02463 RecF/RecN/SMC N terminal domain EWM55_RS00775 PF13361 UvrD-like helicase C-terminal domain EWM55_RS00775 PF00580 UvrD/REP helicase N-terminal domain EWM55_RS00810 PF02486 Replication initiation factor EWM55_RS00810 PF18106 Rolling Circle replication initiation protein N-terminal domain EWM55_RS00855 PF00877 NlpC/P60 family EWM55_RS00890 PF00186 Dihydrofolate reductase EWM55_RS00935 PF00589 Phage integrase family EWM55_RS00935 PF14659 Phage integrase, N-terminal SAM-like domain EWM55_RS00940 PF00117 Glutamine amidotransferase class-I EWM55_RS00940 PF00958 GMP synthase C terminal domain EWM55_RS00940 PF02540 NAD synthase EWM55_RS00945 PF00485 Phosphoribulokinase / Uridine kinase family EWM55_RS00950 PF05175 Methyltransferase small domain EWM55_RS00955 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS00960 PF00591 Glycosyl transferase family, a/b domain EWM55_RS00960 PF02885 Glycosyl transferase family, helical bundle domain EWM55_RS00960 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EWM55_RS00965 PF01791 DeoC/LacD family aldolase EWM55_RS00970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EWM55_RS00975 PF02608 ABC transporter substrate-binding protein PnrA-like EWM55_RS00980 PF00005 ABC transporter EWM55_RS00985 PF02653 Branched-chain amino acid transport system / permease component EWM55_RS00990 PF02653 Branched-chain amino acid transport system / permease component EWM55_RS00995 PF01676 Metalloenzyme superfamily EWM55_RS01000 PF01048 Phosphorylase superfamily EWM55_RS01005 PF01048 Phosphorylase superfamily EWM55_RS01015 PF00300 Histidine phosphatase superfamily (branch 1) EWM55_RS01020 PF02796 Helix-turn-helix domain of resolvase EWM55_RS01020 PF00239 Resolvase, N terminal domain EWM55_RS01025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EWM55_RS01030 PF00164 Ribosomal protein S12/S23 EWM55_RS01035 PF00177 Ribosomal protein S7p/S5e EWM55_RS01040 PF00679 Elongation factor G C-terminus EWM55_RS01040 PF03764 Elongation factor G, domain IV EWM55_RS01040 PF00009 Elongation factor Tu GTP binding domain EWM55_RS01040 PF03144 Elongation factor Tu domain 2 EWM55_RS01040 PF14492 Elongation Factor G, domain II EWM55_RS01045 PF00009 Elongation factor Tu GTP binding domain EWM55_RS01045 PF03144 Elongation factor Tu domain 2 EWM55_RS01045 PF03143 Elongation factor Tu C-terminal domain EWM55_RS01050 PF00338 Ribosomal protein S10p/S20e EWM55_RS01055 PF00297 Ribosomal protein L3 EWM55_RS01060 PF00573 Ribosomal protein L4/L1 family EWM55_RS01065 PF00276 Ribosomal protein L23 EWM55_RS01070 PF03947 Ribosomal Proteins L2, C-terminal domain EWM55_RS01070 PF00181 Ribosomal Proteins L2, RNA binding domain EWM55_RS01075 PF00203 Ribosomal protein S19 EWM55_RS01080 PF00237 Ribosomal protein L22p/L17e EWM55_RS01085 PF07650 KH domain EWM55_RS01085 PF00189 Ribosomal protein S3, C-terminal domain EWM55_RS01090 PF00252 Ribosomal protein L16p/L10e EWM55_RS01095 PF00831 Ribosomal L29 protein EWM55_RS01100 PF00366 Ribosomal protein S17 EWM55_RS01105 PF00238 Ribosomal protein L14p/L23e EWM55_RS01110 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EWM55_RS01110 PF00467 KOW motif EWM55_RS01115 PF00281 Ribosomal protein L5 EWM55_RS01115 PF00673 ribosomal L5P family C-terminus EWM55_RS01120 PF00253 Ribosomal protein S14p/S29e EWM55_RS01125 PF00410 Ribosomal protein S8 EWM55_RS01130 PF00347 Ribosomal protein L6 EWM55_RS01135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EWM55_RS01140 PF00333 Ribosomal protein S5, N-terminal domain EWM55_RS01140 PF03719 Ribosomal protein S5, C-terminal domain EWM55_RS01145 PF00327 Ribosomal protein L30p/L7e EWM55_RS01150 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EWM55_RS01155 PF00344 SecY translocase EWM55_RS01160 PF05191 Adenylate kinase, active site lid EWM55_RS01165 PF01176 Translation initiation factor 1A / IF-1 EWM55_RS01170 PF00444 Ribosomal protein L36 EWM55_RS01175 PF00416 Ribosomal protein S13/S18 EWM55_RS01180 PF00411 Ribosomal protein S11 EWM55_RS01185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EWM55_RS01185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EWM55_RS01185 PF01000 RNA polymerase Rpb3/RpoA insert domain EWM55_RS01190 PF01196 Ribosomal protein L17 EWM55_RS01195 PF00005 ABC transporter EWM55_RS01200 PF00005 ABC transporter EWM55_RS01205 PF02361 Cobalt transport protein EWM55_RS01210 PF01416 tRNA pseudouridine synthase EWM55_RS01220 PF00830 Ribosomal L28 family EWM55_RS01230 PF03780 Asp23 family, cell envelope-related function EWM55_RS01235 PF02734 DAK2 domain EWM55_RS01235 PF13684 Dihydroxyacetone kinase family EWM55_RS01240 PF00271 Helicase conserved C-terminal domain EWM55_RS01240 PF17191 RecG wedge domain EWM55_RS01240 PF00270 DEAD/DEAH box helicase EWM55_RS01245 PF02504 Fatty acid synthesis protein EWM55_RS01250 PF00550 Phosphopantetheine attachment site EWM55_RS01255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EWM55_RS01255 PF00005 ABC transporter EWM55_RS01260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EWM55_RS01260 PF00005 ABC transporter EWM55_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS01275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EWM55_RS01280 PF14622 Ribonuclease-III-like EWM55_RS01280 PF00035 Double-stranded RNA binding motif EWM55_RS01285 PF06470 SMC proteins Flexible Hinge Domain EWM55_RS01285 PF02463 RecF/RecN/SMC N terminal domain EWM55_RS01295 PF02881 SRP54-type protein, helical bundle domain EWM55_RS01295 PF00448 SRP54-type protein, GTPase domain EWM55_RS01300 PF04262 Glutamate-cysteine ligase EWM55_RS01300 PF02655 ATP-grasp domain EWM55_RS01300 PF18419 ATP-grasp-like domain EWM55_RS01310 PF01032 FecCD transport family EWM55_RS01315 PF01032 FecCD transport family EWM55_RS01320 PF00005 ABC transporter EWM55_RS01325 PF01497 Periplasmic binding protein EWM55_RS01345 PF13936 Helix-turn-helix domain EWM55_RS01345 PF00665 Integrase core domain EWM55_RS01355 PF06458 MucBP domain EWM55_RS01375 PF00872 Transposase, Mutator family EWM55_RS01390 PF00230 Major intrinsic protein EWM55_RS01395 PF03788 LrgA family EWM55_RS01400 PF04172 LrgB-like family EWM55_RS01425 PF02632 BioY family EWM55_RS01430 PF00163 Ribosomal protein S4/S9 N-terminal domain EWM55_RS01430 PF01479 S4 domain EWM55_RS01455 PF13277 YmdB-like protein EWM55_RS01465 PF05192 MutS domain III EWM55_RS01465 PF05190 MutS family domain IV EWM55_RS01465 PF01624 MutS domain I EWM55_RS01465 PF00488 MutS domain V EWM55_RS01465 PF05188 MutS domain II EWM55_RS01470 PF01119 DNA mismatch repair protein, C-terminal domain EWM55_RS01470 PF08676 MutL C terminal dimerisation domain EWM55_RS01475 PF02545 Maf-like protein EWM55_RS01480 PF00367 phosphotransferase system, EIIB EWM55_RS01480 PF02378 Phosphotransferase system, EIIC EWM55_RS01485 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS01485 PF07702 UTRA domain EWM55_RS01490 PF01641 SelR domain EWM55_RS01495 PF01330 RuvA N terminal domain EWM55_RS01495 PF07499 RuvA, C-terminal domain EWM55_RS01500 PF05491 RuvB C-terminal winged helix domain EWM55_RS01500 PF17864 RuvB AAA lid domain EWM55_RS01500 PF05496 Holliday junction DNA helicase RuvB P-loop domain EWM55_RS01510 PF01451 Low molecular weight phosphotyrosine protein phosphatase EWM55_RS01520 PF00872 Transposase, Mutator family EWM55_RS01525 PF05525 Branched-chain amino acid transport protein EWM55_RS01530 PF06736 Protein of unknown function (DUF1211) EWM55_RS01535 PF00324 Amino acid permease EWM55_RS01540 PF00005 ABC transporter EWM55_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS01560 PF02146 Sir2 family EWM55_RS01565 PF12464 Maltose acetyltransferase EWM55_RS01565 PF14602 Hexapeptide repeat of succinyl-transferase EWM55_RS01570 PF02829 3H domain EWM55_RS01570 PF08279 HTH domain EWM55_RS01580 PF01327 Polypeptide deformylase EWM55_RS01585 PF00312 Ribosomal protein S15 EWM55_RS01590 PF00575 S1 RNA binding domain EWM55_RS01590 PF03725 3' exoribonuclease family, domain 2 EWM55_RS01590 PF00013 KH domain EWM55_RS01590 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EWM55_RS01590 PF01138 3' exoribonuclease family, domain 1 EWM55_RS01605 PF02705 K+ potassium transporter EWM55_RS01610 PF00571 CBS domain EWM55_RS01610 PF03471 Transporter associated domain EWM55_RS01610 PF01595 Cyclin M transmembrane N-terminal domain EWM55_RS01620 PF01554 MatE EWM55_RS01630 PF14693 Ribosomal protein TL5, C-terminal domain EWM55_RS01630 PF01386 Ribosomal L25p family EWM55_RS01635 PF01479 S4 domain EWM55_RS01635 PF00849 RNA pseudouridylate synthase EWM55_RS01640 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS01645 PF00485 Phosphoribulokinase / Uridine kinase family EWM55_RS01675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EWM55_RS01680 PF03109 ABC1 family EWM55_RS01685 PF01820 D-ala D-ala ligase N-terminus EWM55_RS01685 PF07478 D-ala D-ala ligase C-terminus EWM55_RS01690 PF01225 Mur ligase family, catalytic domain EWM55_RS01690 PF02875 Mur ligase family, glutamate ligase domain EWM55_RS01690 PF08245 Mur ligase middle domain EWM55_RS01695 PF00271 Helicase conserved C-terminal domain EWM55_RS01695 PF00270 DEAD/DEAH box helicase EWM55_RS01700 PF01648 4'-phosphopantetheinyl transferase superfamily EWM55_RS01705 PF01168 Alanine racemase, N-terminal domain EWM55_RS01705 PF00842 Alanine racemase, C-terminal domain EWM55_RS01710 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EWM55_RS01720 PF00253 Ribosomal protein S14p/S29e EWM55_RS01725 PF02801 Beta-ketoacyl synthase, C-terminal domain EWM55_RS01725 PF16197 Ketoacyl-synthetase C-terminal extension EWM55_RS01725 PF08240 Alcohol dehydrogenase GroES-like domain EWM55_RS01725 PF14765 Polyketide synthase dehydratase EWM55_RS01725 PF00550 Phosphopantetheine attachment site EWM55_RS01725 PF00698 Acyl transferase domain EWM55_RS01725 PF00109 Beta-ketoacyl synthase, N-terminal domain EWM55_RS01725 PF08659 KR domain EWM55_RS01730 PF01061 ABC-2 type transporter EWM55_RS01740 PF13520 Amino acid permease EWM55_RS01770 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS01775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EWM55_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS01795 PF12323 Helix-turn-helix domain EWM55_RS01795 PF07282 Putative transposase DNA-binding domain EWM55_RS01795 PF01385 Probable transposase EWM55_RS01805 PF02547 Queuosine biosynthesis protein EWM55_RS01815 PF00690 Cation transporter/ATPase, N-terminus EWM55_RS01815 PF00689 Cation transporting ATPase, C-terminus EWM55_RS01825 PF01702 Queuine tRNA-ribosyltransferase EWM55_RS01830 PF02699 Preprotein translocase subunit EWM55_RS01840 PF00465 Iron-containing alcohol dehydrogenase EWM55_RS01840 PF00171 Aldehyde dehydrogenase family EWM55_RS01845 PF07470 Glycosyl Hydrolase Family 88 EWM55_RS01870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EWM55_RS01875 PF04962 KduI/IolB family EWM55_RS01885 PF01070 FMN-dependent dehydrogenase EWM55_RS01890 PF00288 GHMP kinases N terminal domain EWM55_RS01890 PF08544 GHMP kinases C terminal EWM55_RS01900 PF10509 Galactokinase galactose-binding signature EWM55_RS01900 PF08544 GHMP kinases C terminal EWM55_RS01900 PF00288 GHMP kinases N terminal domain EWM55_RS01905 PF01712 Deoxynucleoside kinase EWM55_RS01920 PF00707 Translation initiation factor IF-3, C-terminal domain EWM55_RS01920 PF05198 Translation initiation factor IF-3, N-terminal domain EWM55_RS01925 PF01632 Ribosomal protein L35 EWM55_RS01930 PF00453 Ribosomal protein L20 EWM55_RS01950 PF05378 Hydantoinase/oxoprolinase N-terminal region EWM55_RS01950 PF01968 Hydantoinase/oxoprolinase EWM55_RS01980 PF03061 Thioesterase superfamily EWM55_RS01985 PF01256 Carbohydrate kinase EWM55_RS01990 PF01546 Peptidase family M20/M25/M40 EWM55_RS02015 PF00535 Glycosyl transferase family 2 EWM55_RS02025 PF05343 M42 glutamyl aminopeptidase EWM55_RS02030 PF00085 Thioredoxin EWM55_RS02035 PF00582 Universal stress protein family EWM55_RS02045 PF01588 Putative tRNA binding domain EWM55_RS02045 PF14794 Domain of unknown function (DUF4479) EWM55_RS02050 PF13180 PDZ domain EWM55_RS02055 PF02590 Predicted SPOUT methyltransferase EWM55_RS02065 PF06125 Bacterial protein of unknown function (DUF961) EWM55_RS02085 PF18106 Rolling Circle replication initiation protein N-terminal domain EWM55_RS02085 PF02486 Replication initiation factor EWM55_RS02090 PF01348 Type II intron maturase EWM55_RS02090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EWM55_RS02120 PF00877 NlpC/P60 family EWM55_RS02135 PF00009 Elongation factor Tu GTP binding domain EWM55_RS02135 PF03764 Elongation factor G, domain IV EWM55_RS02135 PF14492 Elongation Factor G, domain II EWM55_RS02135 PF00679 Elongation factor G C-terminus EWM55_RS02140 PF07690 Major Facilitator Superfamily EWM55_RS02150 PF01076 Plasmid recombination enzyme EWM55_RS02155 PF01446 Replication protein EWM55_RS02175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS02180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS02185 PF03611 PTS system sugar-specific permease component EWM55_RS02190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EWM55_RS02190 PF13378 Enolase C-terminal domain-like EWM55_RS02210 PF00294 pfkB family carbohydrate kinase EWM55_RS02215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS02215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS02220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS02220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS02225 PF01791 DeoC/LacD family aldolase EWM55_RS02240 PF07702 UTRA domain EWM55_RS02240 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS02250 PF07308 Protein of unknown function (DUF1456) EWM55_RS02260 PF02558 Ketopantoate reductase PanE/ApbA EWM55_RS02260 PF08546 Ketopantoate reductase PanE/ApbA C terminal EWM55_RS02280 PF13276 HTH-like domain EWM55_RS02280 PF00665 Integrase core domain EWM55_RS02280 PF13333 Integrase core domain EWM55_RS02295 PF00239 Resolvase, N terminal domain EWM55_RS02295 PF02796 Helix-turn-helix domain of resolvase EWM55_RS02300 PF01380 SIS domain EWM55_RS02300 PF01418 Helix-turn-helix domain, rpiR family EWM55_RS02305 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EWM55_RS02310 PF02378 Phosphotransferase system, EIIC EWM55_RS02310 PF00367 phosphotransferase system, EIIB EWM55_RS02310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS02315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS02315 PF00367 phosphotransferase system, EIIB EWM55_RS02315 PF02378 Phosphotransferase system, EIIC EWM55_RS02325 PF00872 Transposase, Mutator family EWM55_RS02335 PF00403 Heavy-metal-associated domain EWM55_RS02355 PF00375 Sodium:dicarboxylate symporter family EWM55_RS02365 PF01416 tRNA pseudouridine synthase EWM55_RS02370 PF01625 Peptide methionine sulfoxide reductase EWM55_RS02380 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS02380 PF07729 FCD domain EWM55_RS02385 PF02378 Phosphotransferase system, EIIC EWM55_RS02390 PF00232 Glycosyl hydrolase family 1 EWM55_RS02395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS02400 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EWM55_RS02405 PF02378 Phosphotransferase system, EIIC EWM55_RS02420 PF13823 Alcohol dehydrogenase GroES-associated EWM55_RS02420 PF00107 Zinc-binding dehydrogenase EWM55_RS02420 PF08240 Alcohol dehydrogenase GroES-like domain EWM55_RS02430 PF06100 MCRA family EWM55_RS02460 PF00282 Pyridoxal-dependent decarboxylase conserved domain EWM55_RS02470 PF00324 Amino acid permease EWM55_RS02475 PF00689 Cation transporting ATPase, C-terminus EWM55_RS02475 PF00690 Cation transporter/ATPase, N-terminus EWM55_RS02495 PF03466 LysR substrate binding domain EWM55_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS02500 PF00698 Acyl transferase domain EWM55_RS02505 PF16957 Malonate decarboxylase, alpha subunit, transporter EWM55_RS02510 PF06857 Malonate decarboxylase delta subunit (MdcD) EWM55_RS02515 PF01039 Carboxyl transferase domain EWM55_RS02520 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG EWM55_RS02530 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EWM55_RS02545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS02555 PF03611 PTS system sugar-specific permease component EWM55_RS02565 PF01116 Fructose-bisphosphate aldolase class-II EWM55_RS02580 PF00293 NUDIX domain EWM55_RS02585 PF01047 MarR family EWM55_RS02590 PF13673 Acetyltransferase (GNAT) domain EWM55_RS02610 PF00860 Permease family EWM55_RS02620 PF16657 Maltogenic Amylase, C-terminal domain EWM55_RS02620 PF00128 Alpha amylase, catalytic domain EWM55_RS02625 PF00232 Glycosyl hydrolase family 1 EWM55_RS02635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS02635 PF02378 Phosphotransferase system, EIIC EWM55_RS02635 PF00367 phosphotransferase system, EIIB EWM55_RS02640 PF00232 Glycosyl hydrolase family 1 EWM55_RS02655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EWM55_RS02665 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS02665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS02675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EWM55_RS02675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EWM55_RS02680 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EWM55_RS02680 PF01266 FAD dependent oxidoreductase EWM55_RS02685 PF00230 Major intrinsic protein EWM55_RS02695 PF01066 CDP-alcohol phosphatidyltransferase EWM55_RS02715 PF02583 Metal-sensitive transcriptional repressor EWM55_RS02720 PF00581 Rhodanese-like domain EWM55_RS02725 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS02725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS02730 PF13538 UvrD-like helicase C-terminal domain EWM55_RS02740 PF00535 Glycosyl transferase family 2 EWM55_RS02750 PF01906 Putative heavy-metal-binding EWM55_RS02755 PF03610 PTS system fructose IIA component EWM55_RS02760 PF02733 Dak1 domain EWM55_RS02765 PF02734 DAK2 domain EWM55_RS02775 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) EWM55_RS02780 PF13545 Crp-like helix-turn-helix domain EWM55_RS02780 PF00027 Cyclic nucleotide-binding domain EWM55_RS02790 PF00005 ABC transporter EWM55_RS02790 PF13732 Domain of unknown function (DUF4162) EWM55_RS02795 PF16859 Tetracyclin repressor-like, C-terminal domain EWM55_RS02795 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS02805 PF01479 S4 domain EWM55_RS02805 PF00579 tRNA synthetases class I (W and Y) EWM55_RS02810 PF00282 Pyridoxal-dependent decarboxylase conserved domain EWM55_RS02815 PF13520 Amino acid permease EWM55_RS02820 PF03553 Na+/H+ antiporter family EWM55_RS02825 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS02825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EWM55_RS02835 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS02840 PF03636 Glycosyl hydrolase family 65, N-terminal domain EWM55_RS02840 PF03632 Glycosyl hydrolase family 65 central catalytic domain EWM55_RS02840 PF03633 Glycosyl hydrolase family 65, C-terminal domain EWM55_RS02845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS02845 PF00367 phosphotransferase system, EIIB EWM55_RS02845 PF02378 Phosphotransferase system, EIIC EWM55_RS02850 PF03372 Endonuclease/Exonuclease/phosphatase family EWM55_RS02875 PF05870 Phenolic acid decarboxylase (PAD) EWM55_RS02880 PF03551 Transcriptional regulator PadR-like family EWM55_RS02880 PF10400 Virulence activator alpha C-term EWM55_RS02890 PF07690 Major Facilitator Superfamily EWM55_RS02920 PF02441 Flavoprotein EWM55_RS02925 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EWM55_RS02935 PF02687 FtsX-like permease family EWM55_RS02935 PF00005 ABC transporter EWM55_RS02935 PF12704 MacB-like periplasmic core domain EWM55_RS02940 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS02940 PF00072 Response regulator receiver domain EWM55_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS02945 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS02945 PF09308 LuxQ, periplasmic EWM55_RS02945 PF00072 Response regulator receiver domain EWM55_RS02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS02950 PF03466 LysR substrate binding domain EWM55_RS02955 PF04474 Protein of unknown function (DUF554) EWM55_RS02990 PF00005 ABC transporter EWM55_RS03000 PF01263 Aldose 1-epimerase EWM55_RS03005 PF05257 CHAP domain EWM55_RS03005 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS03010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS03010 PF02378 Phosphotransferase system, EIIC EWM55_RS03010 PF00367 phosphotransferase system, EIIB EWM55_RS03015 PF05025 RbsD / FucU transport protein family EWM55_RS03020 PF00294 pfkB family carbohydrate kinase EWM55_RS03020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EWM55_RS03025 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS03030 PF00857 Isochorismatase family EWM55_RS03035 PF00005 ABC transporter EWM55_RS03050 PF00128 Alpha amylase, catalytic domain EWM55_RS03050 PF16657 Maltogenic Amylase, C-terminal domain EWM55_RS03060 PF01594 AI-2E family transporter EWM55_RS03065 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EWM55_RS03065 PF01297 Zinc-uptake complex component A periplasmic EWM55_RS03070 PF00072 Response regulator receiver domain EWM55_RS03070 PF04397 LytTr DNA-binding domain EWM55_RS03080 PF04647 Accessory gene regulator B EWM55_RS03090 PF01712 Deoxynucleoside kinase EWM55_RS03105 PF13361 UvrD-like helicase C-terminal domain EWM55_RS03105 PF00580 UvrD/REP helicase N-terminal domain EWM55_RS03115 PF13673 Acetyltransferase (GNAT) domain EWM55_RS03125 PF03960 ArsC family EWM55_RS03130 PF03960 ArsC family EWM55_RS03160 PF00255 Glutathione peroxidase EWM55_RS03165 PF02664 S-Ribosylhomocysteinase (LuxS) EWM55_RS03170 PF01053 Cys/Met metabolism PLP-dependent enzyme EWM55_RS03175 PF00291 Pyridoxal-phosphate dependent enzyme EWM55_RS03190 PF01132 Elongation factor P (EF-P) OB domain EWM55_RS03190 PF08207 Elongation factor P (EF-P) KOW-like domain EWM55_RS03190 PF09285 Elongation factor P, C-terminal EWM55_RS03195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EWM55_RS03195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EWM55_RS03200 PF01678 Diaminopimelate epimerase EWM55_RS03205 PF00701 Dihydrodipicolinate synthetase family EWM55_RS03210 PF05173 Dihydrodipicolinate reductase, C-terminus EWM55_RS03210 PF01113 Dihydrodipicolinate reductase, N-terminus EWM55_RS03215 PF14602 Hexapeptide repeat of succinyl-transferase EWM55_RS03215 PF00132 Bacterial transferase hexapeptide (six repeats) EWM55_RS03215 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EWM55_RS03220 PF02774 Semialdehyde dehydrogenase, dimerisation domain EWM55_RS03220 PF01118 Semialdehyde dehydrogenase, NAD binding domain EWM55_RS03225 PF13840 ACT domain EWM55_RS03225 PF00696 Amino acid kinase family EWM55_RS03230 PF07687 Peptidase dimerisation domain EWM55_RS03230 PF01546 Peptidase family M20/M25/M40 EWM55_RS03235 PF00155 Aminotransferase class I and II EWM55_RS03240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS03240 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS03260 PF11799 impB/mucB/samB family C-terminal domain EWM55_RS03260 PF11798 IMS family HHH motif EWM55_RS03260 PF00817 impB/mucB/samB family EWM55_RS03265 PF08544 GHMP kinases C terminal EWM55_RS03265 PF00288 GHMP kinases N terminal domain EWM55_RS03265 PF10509 Galactokinase galactose-binding signature EWM55_RS03270 PF01263 Aldose 1-epimerase EWM55_RS03275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS03280 PF12833 Helix-turn-helix domain EWM55_RS03280 PF02311 AraC-like ligand binding domain EWM55_RS03285 PF02525 Flavodoxin-like fold EWM55_RS03295 PF00324 Amino acid permease EWM55_RS03300 PF00005 ABC transporter EWM55_RS03305 PF00950 ABC 3 transport family EWM55_RS03310 PF01297 Zinc-uptake complex component A periplasmic EWM55_RS03320 PF08331 Domain of unknown function (DUF1730) EWM55_RS03325 PF04972 BON domain EWM55_RS03325 PF01476 LysM domain EWM55_RS03335 PF01266 FAD dependent oxidoreductase EWM55_RS03340 PF07690 Major Facilitator Superfamily EWM55_RS03350 PF01316 Arginine repressor, DNA binding domain EWM55_RS03350 PF02863 Arginine repressor, C-terminal domain EWM55_RS03355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EWM55_RS03355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EWM55_RS03355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EWM55_RS03355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EWM55_RS03365 PF02566 OsmC-like protein EWM55_RS03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS03370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS03375 PF00857 Isochorismatase family EWM55_RS03380 PF16925 Tetracyclin repressor-like, C-terminal domain EWM55_RS03380 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS03405 PF02586 SOS response associated peptidase (SRAP) EWM55_RS03450 PF05067 Manganese containing catalase EWM55_RS03455 PF01547 Bacterial extracellular solute-binding protein EWM55_RS03460 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS03505 PF00072 Response regulator receiver domain EWM55_RS03505 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS03515 PF06800 Sugar transport protein EWM55_RS03520 PF13520 Amino acid permease EWM55_RS03525 PF05816 Toxic anion resistance protein (TelA) EWM55_RS03540 PF00293 NUDIX domain EWM55_RS03550 PF01048 Phosphorylase superfamily EWM55_RS03555 PF00857 Isochorismatase family EWM55_RS03560 PF13229 Right handed beta helix region EWM55_RS03570 PF01431 Peptidase family M13 EWM55_RS03570 PF05649 Peptidase family M13 EWM55_RS03580 PF14572 Phosphoribosyl synthetase-associated domain EWM55_RS03580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EWM55_RS03585 PF00266 Aminotransferase class-V EWM55_RS03595 PF07690 Major Facilitator Superfamily EWM55_RS03610 PF13520 Amino acid permease EWM55_RS03615 PF00155 Aminotransferase class I and II EWM55_RS03620 PF07690 Major Facilitator Superfamily EWM55_RS03635 PF01131 DNA topoisomerase EWM55_RS03635 PF01751 Toprim domain EWM55_RS03640 PF00535 Glycosyl transferase family 2 EWM55_RS03645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EWM55_RS03645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EWM55_RS03650 PF03601 Conserved hypothetical protein 698 EWM55_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS03665 PF03466 LysR substrate binding domain EWM55_RS03675 PF01098 Cell cycle protein EWM55_RS03680 PF03960 ArsC family EWM55_RS03685 PF01597 Glycine cleavage H-protein EWM55_RS03690 PF09383 NIL domain EWM55_RS03690 PF00005 ABC transporter EWM55_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS03700 PF03180 NLPA lipoprotein EWM55_RS03705 PF00005 ABC transporter EWM55_RS03710 PF01458 Uncharacterized protein family (UPF0051) EWM55_RS03715 PF00266 Aminotransferase class-V EWM55_RS03720 PF01592 NifU-like N terminal domain EWM55_RS03725 PF01458 Uncharacterized protein family (UPF0051) EWM55_RS03730 PF00589 Phage integrase family EWM55_RS03730 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS03780 PF00367 phosphotransferase system, EIIB EWM55_RS03780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS03780 PF02378 Phosphotransferase system, EIIC EWM55_RS03785 PF00232 Glycosyl hydrolase family 1 EWM55_RS03790 PF03123 CAT RNA binding domain EWM55_RS03790 PF00874 PRD domain EWM55_RS03800 PF02384 N-6 DNA Methylase EWM55_RS03800 PF12161 HsdM N-terminal domain EWM55_RS03820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EWM55_RS03820 PF12008 Type I restriction and modification enzyme - subunit R C terminal EWM55_RS03820 PF18766 SWI2/SNF2 ATPase EWM55_RS03845 PF00005 ABC transporter EWM55_RS03845 PF02687 FtsX-like permease family EWM55_RS03845 PF12704 MacB-like periplasmic core domain EWM55_RS03855 PF00872 Transposase, Mutator family EWM55_RS03860 PF13145 PPIC-type PPIASE domain EWM55_RS03870 PF00781 Diacylglycerol kinase catalytic domain EWM55_RS03905 PF01638 HxlR-like helix-turn-helix EWM55_RS03915 PF04203 Sortase domain EWM55_RS03925 PF03123 CAT RNA binding domain EWM55_RS03925 PF00874 PRD domain EWM55_RS03935 PF02378 Phosphotransferase system, EIIC EWM55_RS03935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS03935 PF00367 phosphotransferase system, EIIB EWM55_RS03940 PF00232 Glycosyl hydrolase family 1 EWM55_RS03945 PF07702 UTRA domain EWM55_RS03945 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS03970 PF03641 Possible lysine decarboxylase EWM55_RS03980 PF01712 Deoxynucleoside kinase EWM55_RS03990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EWM55_RS03990 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS03995 PF00232 Glycosyl hydrolase family 1 EWM55_RS04015 PF00884 Sulfatase EWM55_RS04025 PF00334 Nucleoside diphosphate kinase EWM55_RS04030 PF00689 Cation transporting ATPase, C-terminus EWM55_RS04030 PF00690 Cation transporter/ATPase, N-terminus EWM55_RS04035 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS04045 PF09383 NIL domain EWM55_RS04045 PF00005 ABC transporter EWM55_RS04050 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS04055 PF03180 NLPA lipoprotein EWM55_RS04060 PF01546 Peptidase family M20/M25/M40 EWM55_RS04060 PF07687 Peptidase dimerisation domain EWM55_RS04065 PF03553 Na+/H+ antiporter family EWM55_RS04085 PF00324 Amino acid permease EWM55_RS04095 PF08546 Ketopantoate reductase PanE/ApbA C terminal EWM55_RS04095 PF02558 Ketopantoate reductase PanE/ApbA EWM55_RS04100 PF02595 Glycerate kinase family EWM55_RS04105 PF00005 ABC transporter EWM55_RS04105 PF12848 ABC transporter EWM55_RS04110 PF00300 Histidine phosphatase superfamily (branch 1) EWM55_RS04120 PF13580 SIS domain EWM55_RS04125 PF00367 phosphotransferase system, EIIB EWM55_RS04125 PF02378 Phosphotransferase system, EIIC EWM55_RS04130 PF07972 NrdI Flavodoxin like EWM55_RS04135 PF13520 Amino acid permease EWM55_RS04140 PF12679 ABC-2 family transporter protein EWM55_RS04145 PF00005 ABC transporter EWM55_RS04150 PF00893 Small Multidrug Resistance protein EWM55_RS04165 PF01470 Pyroglutamyl peptidase EWM55_RS04180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EWM55_RS04210 PF03167 Uracil DNA glycosylase superfamily EWM55_RS04215 PF01515 Phosphate acetyl/butaryl transferase EWM55_RS04220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EWM55_RS04225 PF13302 Acetyltransferase (GNAT) domain EWM55_RS04235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EWM55_RS04235 PF07733 Bacterial DNA polymerase III alpha NTPase domain EWM55_RS04235 PF11490 DNA polymerase III polC-type N-terminus II EWM55_RS04235 PF14480 DNA polymerase III polC-type N-terminus I EWM55_RS04235 PF14579 Helix-hairpin-helix motif EWM55_RS04235 PF02811 PHP domain EWM55_RS04235 PF00929 Exonuclease EWM55_RS04250 PF03372 Endonuclease/Exonuclease/phosphatase family EWM55_RS04255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS04260 PF01565 FAD binding domain EWM55_RS04260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EWM55_RS04285 PF14537 Cytochrome c3 EWM55_RS04285 PF00890 FAD binding domain EWM55_RS04295 PF14765 Polyketide synthase dehydratase EWM55_RS04295 PF16197 Ketoacyl-synthetase C-terminal extension EWM55_RS04295 PF00109 Beta-ketoacyl synthase, N-terminal domain EWM55_RS04295 PF00698 Acyl transferase domain EWM55_RS04295 PF08659 KR domain EWM55_RS04295 PF02801 Beta-ketoacyl synthase, C-terminal domain EWM55_RS04295 PF08240 Alcohol dehydrogenase GroES-like domain EWM55_RS04295 PF00550 Phosphopantetheine attachment site EWM55_RS04300 PF13460 NAD(P)H-binding EWM55_RS04305 PF12822 ECF transporter, substrate-specific component EWM55_RS04310 PF02441 Flavoprotein EWM55_RS04315 PF02441 Flavoprotein EWM55_RS04315 PF04127 DNA / pantothenate metabolism flavoprotein EWM55_RS04320 PF08240 Alcohol dehydrogenase GroES-like domain EWM55_RS04320 PF00107 Zinc-binding dehydrogenase EWM55_RS04330 PF08402 TOBE domain EWM55_RS04330 PF00005 ABC transporter EWM55_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS04340 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS04345 PF13416 Bacterial extracellular solute-binding protein EWM55_RS04350 PF02954 Bacterial regulatory protein, Fis family EWM55_RS04350 PF00158 Sigma-54 interaction domain EWM55_RS04360 PF03830 PTS system sorbose subfamily IIB component EWM55_RS04365 PF03609 PTS system sorbose-specific iic component EWM55_RS04370 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS04385 PF00480 ROK family EWM55_RS04425 PF14659 Phage integrase, N-terminal SAM-like domain EWM55_RS04425 PF00589 Phage integrase family EWM55_RS04435 PF01717 Cobalamin-independent synthase, Catalytic domain EWM55_RS04445 PF13411 MerR HTH family regulatory protein EWM55_RS04450 PF00120 Glutamine synthetase, catalytic domain EWM55_RS04450 PF03951 Glutamine synthetase, beta-Grasp domain EWM55_RS04465 PF00117 Glutamine amidotransferase class-I EWM55_RS04465 PF06418 CTP synthase N-terminus EWM55_RS04475 PF01116 Fructose-bisphosphate aldolase class-II EWM55_RS04480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EWM55_RS04485 PF07498 Rho termination factor, N-terminal domain EWM55_RS04485 PF07497 Rho termination factor, RNA-binding domain EWM55_RS04485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EWM55_RS04490 PF01197 Ribosomal protein L31 EWM55_RS04505 PF02378 Phosphotransferase system, EIIC EWM55_RS04505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS04510 PF01116 Fructose-bisphosphate aldolase class-II EWM55_RS04515 PF08220 DeoR-like helix-turn-helix domain EWM55_RS04515 PF00455 DeoR C terminal sensor domain EWM55_RS04525 PF07690 Major Facilitator Superfamily EWM55_RS04535 PF13545 Crp-like helix-turn-helix domain EWM55_RS04555 PF12169 DNA polymerase III subunits gamma and tau domain III EWM55_RS04560 PF02575 YbaB/EbfC DNA-binding family EWM55_RS04565 PF13662 Toprim domain EWM55_RS04565 PF02132 RecR protein EWM55_RS04570 PF02223 Thymidylate kinase EWM55_RS04575 PF06153 Cyclic-di-AMP receptor EWM55_RS04580 PF09115 DNA polymerase III, delta subunit, C terminal EWM55_RS04585 PF04468 PSP1 C-terminal conserved region EWM55_RS04590 PF06156 Initiation control protein YabA EWM55_RS04595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EWM55_RS04600 PF00817 impB/mucB/samB family EWM55_RS04600 PF11798 IMS family HHH motif EWM55_RS04600 PF11799 impB/mucB/samB family C-terminal domain EWM55_RS04610 PF13597 Anaerobic ribonucleoside-triphosphate reductase EWM55_RS04610 PF03477 ATP cone domain EWM55_RS04615 PF00005 ABC transporter EWM55_RS04620 PF02687 FtsX-like permease family EWM55_RS04635 PF00501 AMP-binding enzyme EWM55_RS04635 PF13193 AMP-binding enzyme C-terminal domain EWM55_RS04640 PF03062 MBOAT, membrane-bound O-acyltransferase family EWM55_RS04645 PF00550 Phosphopantetheine attachment site EWM55_RS04650 PF04914 DltD protein EWM55_RS04655 PF05343 M42 glutamyl aminopeptidase EWM55_RS04665 PF12706 Beta-lactamase superfamily domain EWM55_RS04670 PF03099 Biotin/lipoate A/B protein ligase family EWM55_RS04670 PF10437 Bacterial lipoate protein ligase C-terminus EWM55_RS04695 PF06993 Protein of unknown function (DUF1304) EWM55_RS04700 PF01740 STAS domain EWM55_RS04700 PF00916 Sulfate permease family EWM55_RS04710 PF00829 Ribosomal prokaryotic L21 protein EWM55_RS04720 PF01016 Ribosomal L27 protein EWM55_RS04740 PF01381 Helix-turn-helix EWM55_RS05005 PF00874 PRD domain EWM55_RS05005 PF03610 PTS system fructose IIA component EWM55_RS05005 PF00158 Sigma-54 interaction domain EWM55_RS05010 PF03610 PTS system fructose IIA component EWM55_RS05010 PF03830 PTS system sorbose subfamily IIB component EWM55_RS05015 PF03610 PTS system fructose IIA component EWM55_RS05015 PF03830 PTS system sorbose subfamily IIB component EWM55_RS05020 PF03609 PTS system sorbose-specific iic component EWM55_RS05025 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS05035 PF04226 Transglycosylase associated protein EWM55_RS05040 PF00557 Metallopeptidase family M24 EWM55_RS05040 PF01321 Creatinase/Prolidase N-terminal domain EWM55_RS05045 PF03780 Asp23 family, cell envelope-related function EWM55_RS05050 PF01029 NusB family EWM55_RS05055 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EWM55_RS05055 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EWM55_RS05060 PF02601 Exonuclease VII, large subunit EWM55_RS05060 PF13742 OB-fold nucleic acid binding domain EWM55_RS05065 PF02609 Exonuclease VII small subunit EWM55_RS05070 PF00348 Polyprenyl synthetase EWM55_RS05075 PF01479 S4 domain EWM55_RS05075 PF01728 FtsJ-like methyltransferase EWM55_RS05080 PF01316 Arginine repressor, DNA binding domain EWM55_RS05080 PF02863 Arginine repressor, C-terminal domain EWM55_RS05085 PF13476 AAA domain EWM55_RS05105 PF02381 MraZ protein, putative antitoxin-like EWM55_RS05110 PF01795 MraW methylase family EWM55_RS05120 PF00905 Penicillin binding protein transpeptidase domain EWM55_RS05120 PF03793 PASTA domain EWM55_RS05120 PF03717 Penicillin-binding Protein dimerisation domain EWM55_RS05125 PF00953 Glycosyl transferase family 4 EWM55_RS05125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EWM55_RS05130 PF02875 Mur ligase family, glutamate ligase domain EWM55_RS05130 PF08245 Mur ligase middle domain EWM55_RS05135 PF04101 Glycosyltransferase family 28 C-terminal domain EWM55_RS05135 PF03033 Glycosyltransferase family 28 N-terminal domain EWM55_RS05140 PF03799 Cell division protein FtsQ EWM55_RS05140 PF08478 POTRA domain, FtsQ-type EWM55_RS05145 PF11983 Membrane-attachment and polymerisation-promoting switch EWM55_RS05145 PF02491 SHS2 domain inserted in FTSA EWM55_RS05150 PF12327 FtsZ family, C-terminal domain EWM55_RS05150 PF00091 Tubulin/FtsZ family, GTPase domain EWM55_RS05155 PF01168 Alanine racemase, N-terminal domain EWM55_RS05160 PF04472 Cell division protein SepF EWM55_RS05170 PF01479 S4 domain EWM55_RS05170 PF17774 Putative RNA-binding domain in YlmH EWM55_RS05175 PF05103 DivIVA protein EWM55_RS05180 PF00133 tRNA synthetases class I (I, L, M and V) EWM55_RS05180 PF06827 Zinc finger found in FPG and IleRS EWM55_RS05180 PF08264 Anticodon-binding domain of tRNA EWM55_RS05185 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EWM55_RS05185 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EWM55_RS05200 PF17746 SfsA N-terminal OB domain EWM55_RS05200 PF03749 Sugar fermentation stimulation protein RE domain EWM55_RS05205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS05210 PF00271 Helicase conserved C-terminal domain EWM55_RS05210 PF00270 DEAD/DEAH box helicase EWM55_RS05215 PF00158 Sigma-54 interaction domain EWM55_RS05215 PF03610 PTS system fructose IIA component EWM55_RS05215 PF00874 PRD domain EWM55_RS05220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS05225 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EWM55_RS05230 PF02378 Phosphotransferase system, EIIC EWM55_RS05285 PF01381 Helix-turn-helix EWM55_RS05450 PF00574 Clp protease EWM55_RS05550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EWM55_RS05555 PF13537 Glutamine amidotransferase domain EWM55_RS05555 PF00733 Asparagine synthase EWM55_RS05560 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) EWM55_RS05565 PF00471 Ribosomal protein L33 EWM55_RS05570 PF00186 Dihydrofolate reductase EWM55_RS05580 PF00005 ABC transporter EWM55_RS05585 PF01032 FecCD transport family EWM55_RS05590 PF01032 FecCD transport family EWM55_RS05595 PF01812 5-formyltetrahydrofolate cyclo-ligase family EWM55_RS05610 PF00480 ROK family EWM55_RS05615 PF00581 Rhodanese-like domain EWM55_RS05620 PF04343 Protein of unknown function, DUF488 EWM55_RS05635 PF16363 GDP-mannose 4,6 dehydratase EWM55_RS05640 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EWM55_RS05640 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EWM55_RS05645 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS05650 PF00814 Glycoprotease family EWM55_RS05655 PF00583 Acetyltransferase (GNAT) family EWM55_RS05660 PF00583 Acetyltransferase (GNAT) family EWM55_RS05665 PF00814 Glycoprotease family EWM55_RS05670 PF00027 Cyclic nucleotide-binding domain EWM55_RS05670 PF13545 Crp-like helix-turn-helix domain EWM55_RS05680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EWM55_RS05680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EWM55_RS05685 PF00696 Amino acid kinase family EWM55_RS05690 PF05746 DALR anticodon binding domain EWM55_RS05690 PF00750 tRNA synthetases class I (R) EWM55_RS05690 PF03485 Arginyl tRNA synthetase N terminal domain EWM55_RS05700 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS05705 PF00266 Aminotransferase class-V EWM55_RS05710 PF02863 Arginine repressor, C-terminal domain EWM55_RS05710 PF01316 Arginine repressor, DNA binding domain EWM55_RS05715 PF00318 Ribosomal protein S2 EWM55_RS05720 PF00889 Elongation factor TS EWM55_RS05725 PF00696 Amino acid kinase family EWM55_RS05730 PF01765 Ribosome recycling factor EWM55_RS05740 PF01255 Putative undecaprenyl diphosphate synthase EWM55_RS05750 PF02163 Peptidase family M50 EWM55_RS05750 PF17820 PDZ domain EWM55_RS05755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EWM55_RS05755 PF04073 Aminoacyl-tRNA editing domain EWM55_RS05755 PF03129 Anticodon binding domain EWM55_RS05760 PF14480 DNA polymerase III polC-type N-terminus I EWM55_RS05760 PF11490 DNA polymerase III polC-type N-terminus II EWM55_RS05760 PF07733 Bacterial DNA polymerase III alpha NTPase domain EWM55_RS05760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EWM55_RS05760 PF02811 PHP domain EWM55_RS05760 PF00929 Exonuclease EWM55_RS05760 PF14579 Helix-hairpin-helix motif EWM55_RS05765 PF17384 RimP C-terminal SH3 domain EWM55_RS05765 PF02576 RimP N-terminal domain EWM55_RS05770 PF13184 NusA-like KH domain EWM55_RS05770 PF08529 NusA N-terminal domain EWM55_RS05770 PF00575 S1 RNA binding domain EWM55_RS05775 PF04296 Protein of unknown function (DUF448) EWM55_RS05780 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EWM55_RS05785 PF11987 Translation-initiation factor 2 EWM55_RS05785 PF00009 Elongation factor Tu GTP binding domain EWM55_RS05785 PF04760 Translation initiation factor IF-2, N-terminal region EWM55_RS05790 PF02033 Ribosome-binding factor A EWM55_RS05795 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS05800 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EWM55_RS05800 PF09364 XFP N-terminal domain EWM55_RS05800 PF09363 XFP C-terminal domain EWM55_RS05810 PF16198 tRNA pseudouridylate synthase B C-terminal domain EWM55_RS05810 PF01509 TruB family pseudouridylate synthase (N terminal domain) EWM55_RS05815 PF06574 FAD synthetase EWM55_RS05815 PF01687 Riboflavin kinase EWM55_RS05825 PF06800 Sugar transport protein EWM55_RS05830 PF12728 Helix-turn-helix domain EWM55_RS05835 PF08818 Domain of unknown function (DU1801) EWM55_RS05845 PF17676 LD-carboxypeptidase C-terminal domain EWM55_RS05845 PF02016 LD-carboxypeptidase N-terminal domain EWM55_RS05865 PF01965 DJ-1/PfpI family EWM55_RS05895 PF04055 Radical SAM superfamily EWM55_RS05895 PF06969 HemN C-terminal domain EWM55_RS05900 PF01628 HrcA protein C terminal domain EWM55_RS05905 PF01025 GrpE EWM55_RS05910 PF00012 Hsp70 protein EWM55_RS05915 PF00684 DnaJ central domain EWM55_RS05915 PF00226 DnaJ domain EWM55_RS05915 PF01556 DnaJ C terminal domain EWM55_RS05925 PF00005 ABC transporter EWM55_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS05935 PF00271 Helicase conserved C-terminal domain EWM55_RS05935 PF17757 UvrB interaction domain EWM55_RS05935 PF12344 Ultra-violet resistance protein B EWM55_RS05935 PF02151 UvrB/uvrC motif EWM55_RS05935 PF04851 Type III restriction enzyme, res subunit EWM55_RS05940 PF00005 ABC transporter EWM55_RS05940 PF17755 UvrA DNA-binding domain EWM55_RS05940 PF17760 UvrA interaction domain EWM55_RS05950 PF01177 Asp/Glu/Hydantoin racemase EWM55_RS05955 PF03668 P-loop ATPase protein family EWM55_RS05960 PF01933 Uncharacterised protein family UPF0052 EWM55_RS05965 PF10298 WhiA N-terminal LAGLIDADG-like domain EWM55_RS05965 PF14527 WhiA LAGLIDADG-like domain EWM55_RS05965 PF02650 WhiA C-terminal HTH domain EWM55_RS06005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EWM55_RS06005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EWM55_RS06005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EWM55_RS06005 PF12838 4Fe-4S dicluster domain EWM55_RS06005 PF10371 Domain of unknown function EWM55_RS06005 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EWM55_RS06010 PF02457 DisA bacterial checkpoint controller nucleotide-binding EWM55_RS06020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EWM55_RS06020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EWM55_RS06020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EWM55_RS06020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EWM55_RS06025 PF01380 SIS domain EWM55_RS06040 PF01343 Peptidase family S49 EWM55_RS06045 PF06271 RDD family EWM55_RS06055 PF05697 Bacterial trigger factor protein (TF) EWM55_RS06055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EWM55_RS06055 PF05698 Bacterial trigger factor protein (TF) C-terminus EWM55_RS06060 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS06060 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS06060 PF06689 ClpX C4-type zinc finger EWM55_RS06065 PF01926 50S ribosome-binding GTPase EWM55_RS06080 PF08220 DeoR-like helix-turn-helix domain EWM55_RS06080 PF00455 DeoR C terminal sensor domain EWM55_RS06085 PF00294 pfkB family carbohydrate kinase EWM55_RS06090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS06090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS06095 PF00654 Voltage gated chloride channel EWM55_RS06100 PF00580 UvrD/REP helicase N-terminal domain EWM55_RS06100 PF13361 UvrD-like helicase C-terminal domain EWM55_RS06105 PF00533 BRCA1 C Terminus (BRCT) domain EWM55_RS06105 PF03120 NAD-dependent DNA ligase OB-fold domain EWM55_RS06105 PF12826 Helix-hairpin-helix motif EWM55_RS06105 PF01653 NAD-dependent DNA ligase adenylation domain EWM55_RS06105 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EWM55_RS06110 PF02686 Glu-tRNAGln amidotransferase C subunit EWM55_RS06115 PF01425 Amidase EWM55_RS06120 PF02934 GatB/GatE catalytic domain EWM55_RS06120 PF02637 GatB domain EWM55_RS06125 PF00781 Diacylglycerol kinase catalytic domain EWM55_RS06130 PF05958 tRNA (Uracil-5-)-methyltransferase EWM55_RS06145 PF01717 Cobalamin-independent synthase, Catalytic domain EWM55_RS06155 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS06160 PF16874 Glycosyl hydrolase family 36 C-terminal domain EWM55_RS06160 PF16875 Glycosyl hydrolase family 36 N-terminal domain EWM55_RS06165 PF00703 Glycosyl hydrolases family 2 EWM55_RS06165 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EWM55_RS06165 PF02837 Glycosyl hydrolases family 2, sugar binding domain EWM55_RS06170 PF02929 Beta galactosidase small chain EWM55_RS06180 PF00793 DAHP synthetase I family EWM55_RS06180 PF18152 DAHP synthase ferredoxin-like domain EWM55_RS06185 PF01761 3-dehydroquinate synthase EWM55_RS06190 PF01264 Chorismate synthase EWM55_RS06195 PF02153 Prephenate dehydrogenase EWM55_RS06195 PF01842 ACT domain EWM55_RS06200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EWM55_RS06205 PF01202 Shikimate kinase EWM55_RS06210 PF00800 Prephenate dehydratase EWM55_RS06215 PF00672 HAMP domain EWM55_RS06215 PF06580 Histidine kinase EWM55_RS06215 PF02743 Cache domain EWM55_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS06220 PF12833 Helix-turn-helix domain EWM55_RS06225 PF00072 Response regulator receiver domain EWM55_RS06225 PF12833 Helix-turn-helix domain EWM55_RS06230 PF13416 Bacterial extracellular solute-binding protein EWM55_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS06245 PF07556 Protein of unknown function (DUF1538) EWM55_RS06250 PF07556 Protein of unknown function (DUF1538) EWM55_RS06265 PF01385 Probable transposase EWM55_RS06265 PF12323 Helix-turn-helix domain EWM55_RS06265 PF07282 Putative transposase DNA-binding domain EWM55_RS06280 PF00300 Histidine phosphatase superfamily (branch 1) EWM55_RS06285 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS06295 PF00375 Sodium:dicarboxylate symporter family EWM55_RS06315 PF12368 Rhodanase C-terminal EWM55_RS06315 PF00581 Rhodanese-like domain EWM55_RS06315 PF17773 UPF0176 acylphosphatase like domain EWM55_RS06325 PF09371 Tex-like protein N-terminal domain EWM55_RS06325 PF16921 Tex protein YqgF-like domain EWM55_RS06325 PF00575 S1 RNA binding domain EWM55_RS06325 PF17674 HHH domain EWM55_RS06330 PF10263 SprT-like family EWM55_RS06335 PF02698 DUF218 domain EWM55_RS06340 PF02875 Mur ligase family, glutamate ligase domain EWM55_RS06340 PF08245 Mur ligase middle domain EWM55_RS06340 PF01225 Mur ligase family, catalytic domain EWM55_RS06350 PF01027 Inhibitor of apoptosis-promoting Bax1 EWM55_RS06355 PF00476 DNA polymerase family A EWM55_RS06355 PF01367 5'-3' exonuclease, C-terminal SAM fold EWM55_RS06355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EWM55_RS06360 PF06827 Zinc finger found in FPG and IleRS EWM55_RS06360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EWM55_RS06360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EWM55_RS06365 PF01121 Dephospho-CoA kinase EWM55_RS06375 PF03477 ATP cone domain EWM55_RS06385 PF01695 IstB-like ATP binding protein EWM55_RS06385 PF07319 Primosomal protein DnaI N-terminus EWM55_RS06405 PF04816 tRNA (adenine(22)-N(1))-methyltransferase EWM55_RS06410 PF01784 NIF3 (NGG1p interacting factor 3) EWM55_RS06415 PF07687 Peptidase dimerisation domain EWM55_RS06415 PF01546 Peptidase family M20/M25/M40 EWM55_RS06420 PF00781 Diacylglycerol kinase catalytic domain EWM55_RS06435 PF02861 Clp amino terminal domain, pathogenicity island component EWM55_RS06435 PF17871 AAA lid domain EWM55_RS06435 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS06435 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS06435 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS06455 PF00679 Elongation factor G C-terminus EWM55_RS06455 PF00009 Elongation factor Tu GTP binding domain EWM55_RS06455 PF03144 Elongation factor Tu domain 2 EWM55_RS06455 PF06421 GTP-binding protein LepA C-terminus EWM55_RS06460 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS06460 PF00589 Phage integrase family EWM55_RS06470 PF00872 Transposase, Mutator family EWM55_RS06505 PF00106 short chain dehydrogenase EWM55_RS06510 PF00874 PRD domain EWM55_RS06510 PF05043 Mga helix-turn-helix domain EWM55_RS06510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS06510 PF08279 HTH domain EWM55_RS06520 PF03608 PTS system enzyme II sorbitol-specific factor EWM55_RS06525 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EWM55_RS06525 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EWM55_RS06540 PF00923 Transaldolase/Fructose-6-phosphate aldolase EWM55_RS06545 PF13145 PPIC-type PPIASE domain EWM55_RS06570 PF03960 ArsC family EWM55_RS06585 PF00135 Carboxylesterase family EWM55_RS06595 PF02685 Glucokinase EWM55_RS06595 PF01418 Helix-turn-helix domain, rpiR family EWM55_RS06595 PF01380 SIS domain EWM55_RS06600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EWM55_RS06600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EWM55_RS06605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EWM55_RS06605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EWM55_RS06615 PF00465 Iron-containing alcohol dehydrogenase EWM55_RS06625 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS06630 PF03830 PTS system sorbose subfamily IIB component EWM55_RS06650 PF03786 D-mannonate dehydratase (UxuA) EWM55_RS06655 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS06660 PF00313 'Cold-shock' DNA-binding domain EWM55_RS06680 PF01381 Helix-turn-helix EWM55_RS06710 PF01501 Glycosyl transferase family 8 EWM55_RS06715 PF01501 Glycosyl transferase family 8 EWM55_RS06745 PF03780 Asp23 family, cell envelope-related function EWM55_RS06750 PF04226 Transglycosylase associated protein EWM55_RS06760 PF13443 Cro/C1-type HTH DNA-binding domain EWM55_RS06765 PF11188 Protein of unknown function (DUF2975) EWM55_RS06775 PF07282 Putative transposase DNA-binding domain EWM55_RS06775 PF01385 Probable transposase EWM55_RS06775 PF12323 Helix-turn-helix domain EWM55_RS06790 PF03780 Asp23 family, cell envelope-related function EWM55_RS06795 PF04226 Transglycosylase associated protein EWM55_RS06805 PF00909 Ammonium Transporter Family EWM55_RS06810 PF13520 Amino acid permease EWM55_RS06815 PF04960 Glutaminase EWM55_RS06825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EWM55_RS06825 PF02779 Transketolase, pyrimidine binding domain EWM55_RS06825 PF02780 Transketolase, C-terminal domain EWM55_RS06835 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EWM55_RS06840 PF01613 Flavin reductase like domain EWM55_RS06850 PF01098 Cell cycle protein EWM55_RS06860 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS06890 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS06900 PF00999 Sodium/hydrogen exchanger family EWM55_RS06920 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS06945 PF13192 Thioredoxin domain EWM55_RS06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS06950 PF00578 AhpC/TSA family EWM55_RS06960 PF08125 Mannitol dehydrogenase C-terminal domain EWM55_RS06960 PF01232 Mannitol dehydrogenase Rossmann domain EWM55_RS06965 PF03786 D-mannonate dehydratase (UxuA) EWM55_RS06980 PF01594 AI-2E family transporter EWM55_RS06985 PF01047 MarR family EWM55_RS06990 PF02566 OsmC-like protein EWM55_RS07000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS07000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EWM55_RS07005 PF00128 Alpha amylase, catalytic domain EWM55_RS07005 PF02903 Alpha amylase, N-terminal ig-like domain EWM55_RS07010 PF13416 Bacterial extracellular solute-binding protein EWM55_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS07040 PF01180 Dihydroorotate dehydrogenase EWM55_RS07045 PF01425 Amidase EWM55_RS07050 PF00497 Bacterial extracellular solute-binding proteins, family 3 EWM55_RS07055 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS07075 PF00625 Guanylate kinase EWM55_RS07080 PF01773 Na+ dependent nucleoside transporter N-terminus EWM55_RS07080 PF07662 Na+ dependent nucleoside transporter C-terminus EWM55_RS07085 PF08903 Domain of unknown function (DUF1846) EWM55_RS07115 PF01545 Cation efflux family EWM55_RS07115 PF16916 Dimerisation domain of Zinc Transporter EWM55_RS07135 PF14667 Polysaccharide biosynthesis C-terminal domain EWM55_RS07135 PF01943 Polysaccharide biosynthesis protein EWM55_RS07140 PF02645 Uncharacterised protein, DegV family COG1307 EWM55_RS07145 PF13683 Integrase core domain EWM55_RS07145 PF01610 Transposase EWM55_RS07160 PF00128 Alpha amylase, catalytic domain EWM55_RS07160 PF16657 Maltogenic Amylase, C-terminal domain EWM55_RS07165 PF04260 Protein of unknown function (DUF436) EWM55_RS07175 PF08543 Phosphomethylpyrimidine kinase EWM55_RS07180 PF00501 AMP-binding enzyme EWM55_RS07180 PF13193 AMP-binding enzyme C-terminal domain EWM55_RS07190 PF11181 Heat induced stress protein YflT EWM55_RS07190 PF09557 Domain of unknown function (DUF2382) EWM55_RS07195 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS07200 PF00072 Response regulator receiver domain EWM55_RS07200 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS07210 PF00005 ABC transporter EWM55_RS07250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EWM55_RS07250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS07260 PF00874 PRD domain EWM55_RS07260 PF08279 HTH domain EWM55_RS07260 PF05043 Mga helix-turn-helix domain EWM55_RS07260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS07260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS07270 PF03611 PTS system sugar-specific permease component EWM55_RS07285 PF12833 Helix-turn-helix domain EWM55_RS07285 PF02311 AraC-like ligand binding domain EWM55_RS07290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EWM55_RS07290 PF00056 lactate/malate dehydrogenase, NAD binding domain EWM55_RS07310 PF01131 DNA topoisomerase EWM55_RS07310 PF01751 Toprim domain EWM55_RS07325 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS07330 PF08501 Shikimate dehydrogenase substrate binding domain EWM55_RS07330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EWM55_RS07335 PF00005 ABC transporter EWM55_RS07340 PF02653 Branched-chain amino acid transport system / permease component EWM55_RS07360 PF05670 NFACT protein RNA binding domain EWM55_RS07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS07375 PF03466 LysR substrate binding domain EWM55_RS07395 PF00156 Phosphoribosyl transferase domain EWM55_RS07400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EWM55_RS07405 PF01180 Dihydroorotate dehydrogenase EWM55_RS07410 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EWM55_RS07410 PF00970 Oxidoreductase FAD-binding domain EWM55_RS07415 PF02142 MGS-like domain EWM55_RS07415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EWM55_RS07415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EWM55_RS07420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EWM55_RS07420 PF00117 Glutamine amidotransferase class-I EWM55_RS07425 PF01979 Amidohydrolase family EWM55_RS07430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EWM55_RS07430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EWM55_RS07435 PF00860 Permease family EWM55_RS07440 PF00156 Phosphoribosyl transferase domain EWM55_RS07445 PF00849 RNA pseudouridylate synthase EWM55_RS07445 PF01479 S4 domain EWM55_RS07450 PF01252 Signal peptidase (SPase) II EWM55_RS07465 PF01268 Formate--tetrahydrofolate ligase EWM55_RS07470 PF00313 'Cold-shock' DNA-binding domain EWM55_RS07475 PF17255 EbsA-like protein EWM55_RS07480 PF13456 Reverse transcriptase-like EWM55_RS07490 PF12822 ECF transporter, substrate-specific component EWM55_RS07495 PF02272 DHHA1 domain EWM55_RS07495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EWM55_RS07495 PF01411 tRNA synthetases class II (A) EWM55_RS07505 PF13673 Acetyltransferase (GNAT) domain EWM55_RS07510 PF00271 Helicase conserved C-terminal domain EWM55_RS07510 PF00270 DEAD/DEAH box helicase EWM55_RS07525 PF13520 Amino acid permease EWM55_RS07530 PF01370 NAD dependent epimerase/dehydratase family EWM55_RS07535 PF00155 Aminotransferase class I and II EWM55_RS07550 PF01966 HD domain EWM55_RS07555 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EWM55_RS07560 PF01170 Putative RNA methylase family UPF0020 EWM55_RS07560 PF02926 THUMP domain EWM55_RS07570 PF05103 DivIVA protein EWM55_RS07575 PF06908 YspA SLOG family EWM55_RS07580 PF03838 Recombination protein U EWM55_RS07585 PF00905 Penicillin binding protein transpeptidase domain EWM55_RS07585 PF00912 Transglycosylase EWM55_RS07595 PF10576 Iron-sulfur binding domain of endonuclease III EWM55_RS07595 PF00633 Helix-hairpin-helix motif EWM55_RS07595 PF00730 HhH-GPD superfamily base excision DNA repair protein EWM55_RS07600 PF07261 Replication initiation and membrane attachment EWM55_RS07605 PF07690 Major Facilitator Superfamily EWM55_RS07610 PF01047 MarR family EWM55_RS07625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS07625 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS07630 PF01475 Ferric uptake regulator family EWM55_RS07635 PF00291 Pyridoxal-phosphate dependent enzyme EWM55_RS07640 PF01476 LysM domain EWM55_RS07640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS07645 PF00665 Integrase core domain EWM55_RS07645 PF13936 Helix-turn-helix domain EWM55_RS07650 PF00456 Transketolase, thiamine diphosphate binding domain EWM55_RS07650 PF02780 Transketolase, C-terminal domain EWM55_RS07650 PF02779 Transketolase, pyrimidine binding domain EWM55_RS07655 PF05979 Bacterial protein of unknown function (DUF896) EWM55_RS07660 PF00717 Peptidase S24-like EWM55_RS07660 PF01726 LexA DNA binding domain EWM55_RS07670 PF00156 Phosphoribosyl transferase domain EWM55_RS07675 PF01368 DHH family EWM55_RS07675 PF02272 DHHA1 domain EWM55_RS07675 PF17768 RecJ OB domain EWM55_RS07675 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EWM55_RS07680 PF06305 Lipopolysaccharide assembly protein A domain EWM55_RS07685 PF00106 short chain dehydrogenase EWM55_RS07690 PF00753 Metallo-beta-lactamase superfamily EWM55_RS07690 PF12706 Beta-lactamase superfamily domain EWM55_RS07700 PF01926 50S ribosome-binding GTPase EWM55_RS07700 PF01018 GTP1/OBG EWM55_RS07700 PF09269 Domain of unknown function (DUF1967) EWM55_RS07705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EWM55_RS07705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EWM55_RS07725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EWM55_RS07730 PF07977 FabA-like domain EWM55_RS07740 PF01063 Amino-transferase class IV EWM55_RS07745 PF00924 Mechanosensitive ion channel EWM55_RS07760 PF03725 3' exoribonuclease family, domain 2 EWM55_RS07760 PF01138 3' exoribonuclease family, domain 1 EWM55_RS07765 PF01177 Asp/Glu/Hydantoin racemase EWM55_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS07785 PF00497 Bacterial extracellular solute-binding proteins, family 3 EWM55_RS07790 PF00005 ABC transporter EWM55_RS07795 PF00579 tRNA synthetases class I (W and Y) EWM55_RS07800 PF03147 Ferredoxin-fold anticodon binding domain EWM55_RS07800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EWM55_RS07800 PF03484 tRNA synthetase B5 domain EWM55_RS07800 PF01588 Putative tRNA binding domain EWM55_RS07800 PF03483 B3/4 domain EWM55_RS07805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EWM55_RS07805 PF01409 tRNA synthetases class II core domain (F) EWM55_RS07810 PF01638 HxlR-like helix-turn-helix EWM55_RS07815 PF00580 UvrD/REP helicase N-terminal domain EWM55_RS07815 PF12705 PD-(D/E)XK nuclease superfamily EWM55_RS07815 PF13361 UvrD-like helicase C-terminal domain EWM55_RS07820 PF12705 PD-(D/E)XK nuclease superfamily EWM55_RS07830 PF00854 POT family EWM55_RS07850 PF13529 Peptidase_C39 like family EWM55_RS07905 PF05257 CHAP domain EWM55_RS07905 PF01476 LysM domain EWM55_RS07920 PF01883 Iron-sulfur cluster assembly protein EWM55_RS07925 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EWM55_RS07925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS07930 PF04461 Protein of unknown function (DUF520) EWM55_RS07940 PF00753 Metallo-beta-lactamase superfamily EWM55_RS07950 PF02673 Bacitracin resistance protein BacA EWM55_RS07960 PF04284 Protein of unknown function (DUF441) EWM55_RS07970 PF01649 Ribosomal protein S20 EWM55_RS07975 PF06144 DNA polymerase III, delta subunit EWM55_RS07980 PF13567 Domain of unknown function (DUF4131) EWM55_RS07980 PF00753 Metallo-beta-lactamase superfamily EWM55_RS07980 PF03772 Competence protein EWM55_RS07985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EWM55_RS08000 PF10531 SLBB domain EWM55_RS08015 PF05362 Lon protease (S16) C-terminal proteolytic domain EWM55_RS08015 PF13180 PDZ domain EWM55_RS08020 PF01467 Cytidylyltransferase-like EWM55_RS08030 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) EWM55_RS08045 PF02436 Conserved carboxylase domain EWM55_RS08045 PF02785 Biotin carboxylase C-terminal domain EWM55_RS08045 PF00289 Biotin carboxylase, N-terminal domain EWM55_RS08045 PF00364 Biotin-requiring enzyme EWM55_RS08045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EWM55_RS08045 PF00682 HMGL-like EWM55_RS08050 PF01098 Cell cycle protein EWM55_RS08055 PF07408 Protein of unknown function (DUF1507) EWM55_RS08060 PF09382 RQC domain EWM55_RS08060 PF00570 HRDC domain EWM55_RS08060 PF16124 RecQ zinc-binding EWM55_RS08060 PF00270 DEAD/DEAH box helicase EWM55_RS08060 PF00271 Helicase conserved C-terminal domain EWM55_RS08065 PF00679 Elongation factor G C-terminus EWM55_RS08065 PF00009 Elongation factor Tu GTP binding domain EWM55_RS08065 PF03144 Elongation factor Tu domain 2 EWM55_RS08065 PF14492 Elongation Factor G, domain II EWM55_RS08070 PF00459 Inositol monophosphatase family EWM55_RS08075 PF05256 Uncharacterised protein family (UPF0223) EWM55_RS08080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS08085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EWM55_RS08085 PF00364 Biotin-requiring enzyme EWM55_RS08085 PF02817 e3 binding domain EWM55_RS08090 PF02779 Transketolase, pyrimidine binding domain EWM55_RS08090 PF02780 Transketolase, C-terminal domain EWM55_RS08095 PF00676 Dehydrogenase E1 component EWM55_RS08105 PF00155 Aminotransferase class I and II EWM55_RS08105 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS08115 PF00478 IMP dehydrogenase / GMP reductase domain EWM55_RS08120 PF02653 Branched-chain amino acid transport system / permease component EWM55_RS08125 PF00005 ABC transporter EWM55_RS08130 PF13407 Periplasmic binding protein domain EWM55_RS08140 PF02743 Cache domain EWM55_RS08140 PF00672 HAMP domain EWM55_RS08140 PF06580 Histidine kinase EWM55_RS08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS08145 PF00072 Response regulator receiver domain EWM55_RS08145 PF04397 LytTr DNA-binding domain EWM55_RS08150 PF00248 Aldo/keto reductase family EWM55_RS08155 PF02843 Phosphoribosylglycinamide synthetase, C domain EWM55_RS08155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EWM55_RS08155 PF02844 Phosphoribosylglycinamide synthetase, N domain EWM55_RS08160 PF01808 AICARFT/IMPCHase bienzyme EWM55_RS08160 PF02142 MGS-like domain EWM55_RS08165 PF00551 Formyl transferase EWM55_RS08170 PF00586 AIR synthase related protein, N-terminal domain EWM55_RS08170 PF02769 AIR synthase related protein, C-terminal domain EWM55_RS08175 PF13537 Glutamine amidotransferase domain EWM55_RS08175 PF00156 Phosphoribosyl transferase domain EWM55_RS08180 PF00586 AIR synthase related protein, N-terminal domain EWM55_RS08180 PF02769 AIR synthase related protein, C-terminal domain EWM55_RS08180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EWM55_RS08190 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase EWM55_RS08195 PF01259 SAICAR synthetase EWM55_RS08215 PF00206 Lyase EWM55_RS08215 PF10397 Adenylosuccinate lyase C-terminus EWM55_RS08220 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EWM55_RS08220 PF02222 ATP-grasp domain EWM55_RS08225 PF00731 AIR carboxylase EWM55_RS08235 PF00860 Permease family EWM55_RS08240 PF00156 Phosphoribosyl transferase domain EWM55_RS08245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS08245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EWM55_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS08265 PF13416 Bacterial extracellular solute-binding protein EWM55_RS08275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS08275 PF01476 LysM domain EWM55_RS08280 PF02557 D-alanyl-D-alanine carboxypeptidase EWM55_RS08290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EWM55_RS08290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS08310 PF15975 Flotillin EWM55_RS08310 PF01145 SPFH domain / Band 7 family EWM55_RS08320 PF00989 PAS fold EWM55_RS08320 PF17203 Single cache domain 3 EWM55_RS08320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EWM55_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS08325 PF00989 PAS fold EWM55_RS08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS08325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EWM55_RS08325 PF17203 Single cache domain 3 EWM55_RS08330 PF00072 Response regulator receiver domain EWM55_RS08335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EWM55_RS08335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EWM55_RS08350 PF01979 Amidohydrolase family EWM55_RS08360 PF00155 Aminotransferase class I and II EWM55_RS08375 PF00872 Transposase, Mutator family EWM55_RS08385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EWM55_RS08405 PF00186 Dihydrofolate reductase EWM55_RS08415 PF01476 LysM domain EWM55_RS08415 PF05257 CHAP domain EWM55_RS08420 PF01026 TatD related DNase EWM55_RS08425 PF00005 ABC transporter EWM55_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS08440 PF00403 Heavy-metal-associated domain EWM55_RS08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS08440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS08445 PF00571 CBS domain EWM55_RS08445 PF00005 ABC transporter EWM55_RS08450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EWM55_RS08470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EWM55_RS08470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS08480 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS08485 PF00326 Prolyl oligopeptidase family EWM55_RS08495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS08515 PF01368 DHH family EWM55_RS08515 PF02833 DHHA2 domain EWM55_RS08520 PF04055 Radical SAM superfamily EWM55_RS08525 PF02901 Pyruvate formate lyase-like EWM55_RS08525 PF01228 Glycine radical EWM55_RS08530 PF03989 DNA gyrase C-terminal domain, beta-propeller EWM55_RS08530 PF00521 DNA gyrase/topoisomerase IV, subunit A EWM55_RS08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS08535 PF00204 DNA gyrase B EWM55_RS08535 PF01751 Toprim domain EWM55_RS08535 PF00986 DNA gyrase B subunit, carboxyl terminus EWM55_RS08540 PF13380 CoA binding domain EWM55_RS08545 PF02660 Glycerol-3-phosphate acyltransferase EWM55_RS08555 PF08222 CodY helix-turn-helix domain EWM55_RS08555 PF06018 CodY GAF-like domain EWM55_RS08560 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS08560 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS08560 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS08565 PF00227 Proteasome subunit EWM55_RS08575 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS08575 PF00589 Phage integrase family EWM55_RS08580 PF01134 Glucose inhibited division protein A EWM55_RS08585 PF01396 Topoisomerase DNA binding C4 zinc finger EWM55_RS08585 PF01751 Toprim domain EWM55_RS08585 PF01131 DNA topoisomerase EWM55_RS08590 PF02481 DNA recombination-mediator protein A EWM55_RS08590 PF18255 DNA processing protein A sterile alpha motif domain EWM55_RS08595 PF01351 Ribonuclease HII EWM55_RS08600 PF01926 50S ribosome-binding GTPase EWM55_RS08615 PF10502 Signal peptidase, peptidase S26 EWM55_RS08620 PF06855 YozE SAM-like fold EWM55_RS08625 PF01625 Peptide methionine sulfoxide reductase EWM55_RS08630 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) EWM55_RS08635 PF13472 GDSL-like Lipase/Acylhydrolase family EWM55_RS08640 PF02645 Uncharacterised protein, DegV family COG1307 EWM55_RS08645 PF03006 Haemolysin-III related EWM55_RS08650 PF00186 Dihydrofolate reductase EWM55_RS08655 PF00303 Thymidylate synthase EWM55_RS08660 PF12848 ABC transporter EWM55_RS08660 PF16326 ABC transporter C-terminal domain EWM55_RS08660 PF00005 ABC transporter EWM55_RS08665 PF00999 Sodium/hydrogen exchanger family EWM55_RS08680 PF12627 Probable RNA and SrmB- binding site of polymerase A EWM55_RS08680 PF01743 Poly A polymerase head domain EWM55_RS08680 PF13735 tRNA nucleotidyltransferase domain 2 putative EWM55_RS08685 PF03819 MazG nucleotide pyrophosphohydrolase domain EWM55_RS08690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS08690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EWM55_RS08695 PF08858 IDEAL domain EWM55_RS08695 PF08864 UPF0302 domain EWM55_RS08720 PF00216 Bacterial DNA-binding protein EWM55_RS08725 PF01926 50S ribosome-binding GTPase EWM55_RS08725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EWM55_RS08730 PF00575 S1 RNA binding domain EWM55_RS08735 PF02224 Cytidylate kinase EWM55_RS08745 PF00271 Helicase conserved C-terminal domain EWM55_RS08745 PF00270 DEAD/DEAH box helicase EWM55_RS08765 PF01546 Peptidase family M20/M25/M40 EWM55_RS08770 PF03606 C4-dicarboxylate anaerobic carrier EWM55_RS08775 PF12822 ECF transporter, substrate-specific component EWM55_RS08780 PF01479 S4 domain EWM55_RS08780 PF00849 RNA pseudouridylate synthase EWM55_RS08785 PF04079 Segregation and condensation complex subunit ScpB EWM55_RS08790 PF02616 Segregation and condensation protein ScpA EWM55_RS08800 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS08800 PF00589 Phage integrase family EWM55_RS08805 PF01475 Ferric uptake regulator family EWM55_RS08810 PF13509 S1 domain EWM55_RS08810 PF17783 CvfB-like winged helix domain EWM55_RS08815 PF18708 MapZ extracellular C-terminal domain 2 EWM55_RS08815 PF18041 MapZ extracellular domain 1 EWM55_RS08820 PF00140 Sigma-70 factor, region 1.2 EWM55_RS08820 PF04545 Sigma-70, region 4 EWM55_RS08820 PF03979 Sigma-70 factor, region 1.1 EWM55_RS08820 PF04542 Sigma-70 region 2 EWM55_RS08820 PF04539 Sigma-70 region 3 EWM55_RS08825 PF08275 DNA primase catalytic core, N-terminal domain EWM55_RS08825 PF01807 CHC2 zinc finger EWM55_RS08825 PF10410 DnaB-helicase binding domain of primase EWM55_RS08845 PF00561 alpha/beta hydrolase fold EWM55_RS08850 PF09924 Uncharacterised conserved protein (DUF2156) EWM55_RS08850 PF03706 Lysylphosphatidylglycerol synthase TM region EWM55_RS08855 PF03144 Elongation factor Tu domain 2 EWM55_RS08855 PF00009 Elongation factor Tu GTP binding domain EWM55_RS08855 PF03143 Elongation factor Tu C-terminal domain EWM55_RS08870 PF00248 Aldo/keto reductase family EWM55_RS08885 PF00108 Thiolase, N-terminal domain EWM55_RS08885 PF02803 Thiolase, C-terminal domain EWM55_RS08890 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal EWM55_RS08890 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal EWM55_RS08900 PF00690 Cation transporter/ATPase, N-terminus EWM55_RS08900 PF00689 Cation transporting ATPase, C-terminus EWM55_RS08905 PF13396 Phospholipase_D-nuclease N-terminal EWM55_RS08905 PF13091 PLD-like domain EWM55_RS08910 PF08543 Phosphomethylpyrimidine kinase EWM55_RS08920 PF03960 ArsC family EWM55_RS08930 PF03551 Transcriptional regulator PadR-like family EWM55_RS08935 PF00582 Universal stress protein family EWM55_RS08940 PF00232 Glycosyl hydrolase family 1 EWM55_RS08945 PF02378 Phosphotransferase system, EIIC EWM55_RS08950 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS08950 PF07702 UTRA domain EWM55_RS08960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EWM55_RS08965 PF01738 Dienelactone hydrolase family EWM55_RS08980 PF03611 PTS system sugar-specific permease component EWM55_RS08995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS09000 PF08220 DeoR-like helix-turn-helix domain EWM55_RS09000 PF00455 DeoR C terminal sensor domain EWM55_RS09005 PF00294 pfkB family carbohydrate kinase EWM55_RS09015 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EWM55_RS09020 PF13411 MerR HTH family regulatory protein EWM55_RS09025 PF00296 Luciferase-like monooxygenase EWM55_RS09030 PF01451 Low molecular weight phosphotyrosine protein phosphatase EWM55_RS09035 PF00874 PRD domain EWM55_RS09035 PF05043 Mga helix-turn-helix domain EWM55_RS09035 PF08279 HTH domain EWM55_RS09035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS09040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS09040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS09040 PF02378 Phosphotransferase system, EIIC EWM55_RS09045 PF07071 KDGP aldolase EWM55_RS09050 PF03841 L-seryl-tRNA selenium transferase EWM55_RS09055 PF01979 Amidohydrolase family EWM55_RS09090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS09090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS09090 PF00874 PRD domain EWM55_RS09090 PF05043 Mga helix-turn-helix domain EWM55_RS09090 PF08279 HTH domain EWM55_RS09115 PF00583 Acetyltransferase (GNAT) family EWM55_RS09120 PF00596 Class II Aldolase and Adducin N-terminal domain EWM55_RS09125 PF01261 Xylose isomerase-like TIM barrel EWM55_RS09130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EWM55_RS09140 PF03611 PTS system sugar-specific permease component EWM55_RS09145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS09155 PF00455 DeoR C terminal sensor domain EWM55_RS09155 PF08220 DeoR-like helix-turn-helix domain EWM55_RS09180 PF02378 Phosphotransferase system, EIIC EWM55_RS09185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS09185 PF00367 phosphotransferase system, EIIB EWM55_RS09185 PF02378 Phosphotransferase system, EIIC EWM55_RS09190 PF11975 Family 4 glycosyl hydrolase C-terminal domain EWM55_RS09190 PF02056 Family 4 glycosyl hydrolase EWM55_RS09195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS09195 PF00367 phosphotransferase system, EIIB EWM55_RS09195 PF02378 Phosphotransferase system, EIIC EWM55_RS09200 PF04794 YdjC-like protein EWM55_RS09205 PF03123 CAT RNA binding domain EWM55_RS09205 PF00874 PRD domain EWM55_RS09310 PF18719 ArlS sensor domain EWM55_RS09310 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS09315 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS09315 PF00072 Response regulator receiver domain EWM55_RS09320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EWM55_RS09320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EWM55_RS09325 PF01783 Ribosomal L32p protein family EWM55_RS09335 PF03466 LysR substrate binding domain EWM55_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS09340 PF00224 Pyruvate kinase, barrel domain EWM55_RS09340 PF02887 Pyruvate kinase, alpha/beta domain EWM55_RS09340 PF00391 PEP-utilising enzyme, mobile domain EWM55_RS09345 PF00365 Phosphofructokinase EWM55_RS09350 PF14579 Helix-hairpin-helix motif EWM55_RS09350 PF01336 OB-fold nucleic acid binding domain EWM55_RS09350 PF07733 Bacterial DNA polymerase III alpha NTPase domain EWM55_RS09350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EWM55_RS09350 PF02811 PHP domain EWM55_RS09360 PF07690 Major Facilitator Superfamily EWM55_RS09365 PF00860 Permease family EWM55_RS09375 PF13683 Integrase core domain EWM55_RS09375 PF01610 Transposase EWM55_RS09380 PF03717 Penicillin-binding Protein dimerisation domain EWM55_RS09380 PF00905 Penicillin binding protein transpeptidase domain EWM55_RS09385 PF01418 Helix-turn-helix domain, rpiR family EWM55_RS09385 PF01380 SIS domain EWM55_RS09390 PF02824 TGS domain EWM55_RS09390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EWM55_RS09390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EWM55_RS09390 PF03129 Anticodon binding domain EWM55_RS09400 PF01361 Tautomerase enzyme EWM55_RS09405 PF00403 Heavy-metal-associated domain EWM55_RS09410 PF13538 UvrD-like helicase C-terminal domain EWM55_RS09420 PF01709 Transcriptional regulator EWM55_RS09425 PF05636 HIGH Nucleotidyl Transferase EWM55_RS09430 PF13649 Methyltransferase domain EWM55_RS09440 PF01966 HD domain EWM55_RS09445 PF01467 Cytidylyltransferase-like EWM55_RS09450 PF01985 CRS1 / YhbY (CRM) domain EWM55_RS09455 PF01926 50S ribosome-binding GTPase EWM55_RS09465 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EWM55_RS09470 PF01039 Carboxyl transferase domain EWM55_RS09475 PF02785 Biotin carboxylase C-terminal domain EWM55_RS09475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EWM55_RS09475 PF00289 Biotin carboxylase, N-terminal domain EWM55_RS09480 PF07977 FabA-like domain EWM55_RS09485 PF00364 Biotin-requiring enzyme EWM55_RS09490 PF00109 Beta-ketoacyl synthase, N-terminal domain EWM55_RS09490 PF02801 Beta-ketoacyl synthase, C-terminal domain EWM55_RS09500 PF00698 Acyl transferase domain EWM55_RS09505 PF00550 Phosphopantetheine attachment site EWM55_RS09510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EWM55_RS09510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EWM55_RS09515 PF01047 MarR family EWM55_RS09520 PF08459 UvrC Helix-hairpin-helix N-terminal EWM55_RS09520 PF02151 UvrB/uvrC motif EWM55_RS09520 PF01541 GIY-YIG catalytic domain EWM55_RS09525 PF08796 Protein of unknown function (DUF1797) EWM55_RS09530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EWM55_RS09530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EWM55_RS09535 PF13439 Glycosyltransferase Family 4 EWM55_RS09535 PF00534 Glycosyl transferases group 1 EWM55_RS09540 PF13439 Glycosyltransferase Family 4 EWM55_RS09540 PF00534 Glycosyl transferases group 1 EWM55_RS09545 PF02896 PEP-utilising enzyme, TIM barrel domain EWM55_RS09545 PF00391 PEP-utilising enzyme, mobile domain EWM55_RS09545 PF05524 PEP-utilising enzyme, N-terminal EWM55_RS09550 PF00381 PTS HPr component phosphorylation site EWM55_RS09555 PF17871 AAA lid domain EWM55_RS09555 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS09555 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS09555 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS09575 PF03144 Elongation factor Tu domain 2 EWM55_RS09575 PF16658 Class II release factor RF3, C-terminal domain EWM55_RS09575 PF00009 Elongation factor Tu GTP binding domain EWM55_RS09585 PF00571 CBS domain EWM55_RS09585 PF01595 Cyclin M transmembrane N-terminal domain EWM55_RS09585 PF03471 Transporter associated domain EWM55_RS09590 PF01594 AI-2E family transporter EWM55_RS09595 PF00583 Acetyltransferase (GNAT) family EWM55_RS09600 PF04167 Protein of unknown function (DUF402) EWM55_RS09605 PF14815 NUDIX domain EWM55_RS09605 PF00730 HhH-GPD superfamily base excision DNA repair protein EWM55_RS09610 PF02631 RecX family EWM55_RS09615 PF01938 TRAM domain EWM55_RS09615 PF05958 tRNA (Uracil-5-)-methyltransferase EWM55_RS09620 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EWM55_RS09625 PF03073 TspO/MBR family EWM55_RS09630 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS09635 PF00313 'Cold-shock' DNA-binding domain EWM55_RS09640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EWM55_RS09640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EWM55_RS09645 PF04138 GtrA-like protein EWM55_RS09650 PF01545 Cation efflux family EWM55_RS09660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EWM55_RS09675 PF02080 TrkA-C domain EWM55_RS09675 PF02254 TrkA-N domain EWM55_RS09680 PF00072 Response regulator receiver domain EWM55_RS09680 PF00196 Bacterial regulatory proteins, luxR family EWM55_RS09685 PF00672 HAMP domain EWM55_RS09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS09685 PF07730 Histidine kinase EWM55_RS09695 PF03449 Transcription elongation factor, N-terminal EWM55_RS09695 PF01272 Transcription elongation factor, GreA/GreB, C-term EWM55_RS09700 PF02618 YceG-like family EWM55_RS09710 PF01370 NAD dependent epimerase/dehydratase family EWM55_RS09720 PF01467 Cytidylyltransferase-like EWM55_RS09735 PF00535 Glycosyl transferase family 2 EWM55_RS09735 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EWM55_RS09740 PF01501 Glycosyl transferase family 8 EWM55_RS09740 PF00535 Glycosyl transferase family 2 EWM55_RS09745 PF00535 Glycosyl transferase family 2 EWM55_RS09750 PF00535 Glycosyl transferase family 2 EWM55_RS09755 PF02397 Bacterial sugar transferase EWM55_RS09760 PF00535 Glycosyl transferase family 2 EWM55_RS09765 PF00398 Ribosomal RNA adenine dimethylase EWM55_RS09770 PF00005 ABC transporter EWM55_RS09770 PF08239 Bacterial SH3 domain EWM55_RS09775 PF01061 ABC-2 type transporter EWM55_RS09780 PF13683 Integrase core domain EWM55_RS09780 PF01610 Transposase EWM55_RS09805 PF04321 RmlD substrate binding domain EWM55_RS09810 PF16363 GDP-mannose 4,6 dehydratase EWM55_RS09815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EWM55_RS09820 PF00483 Nucleotidyl transferase EWM55_RS09825 PF00535 Glycosyl transferase family 2 EWM55_RS09840 PF00953 Glycosyl transferase family 4 EWM55_RS09845 PF03631 Virulence factor BrkB EWM55_RS09850 PF00557 Metallopeptidase family M24 EWM55_RS09855 PF00258 Flavodoxin EWM55_RS09865 PF02073 Thermophilic metalloprotease (M29) EWM55_RS10035 PF13276 HTH-like domain EWM55_RS10035 PF00665 Integrase core domain EWM55_RS10035 PF13333 Integrase core domain EWM55_RS10140 PF01381 Helix-turn-helix EWM55_RS10160 PF00589 Phage integrase family EWM55_RS10160 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS10170 PF08359 YsiA-like protein, C-terminal region EWM55_RS10170 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS10190 PF02627 Carboxymuconolactone decarboxylase family EWM55_RS10210 PF03009 Glycerophosphoryl diester phosphodiesterase family EWM55_RS10225 PF00342 Phosphoglucose isomerase EWM55_RS10230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EWM55_RS10230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EWM55_RS10240 PF04073 Aminoacyl-tRNA editing domain EWM55_RS10245 PF01487 Type I 3-dehydroquinase EWM55_RS10250 PF17785 PUA-like domain EWM55_RS10250 PF10672 S-adenosylmethionine-dependent methyltransferase EWM55_RS10255 PF00884 Sulfatase EWM55_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS10290 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS10290 PF00672 HAMP domain EWM55_RS10295 PF00072 Response regulator receiver domain EWM55_RS10295 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS10320 PF13936 Helix-turn-helix domain EWM55_RS10320 PF00665 Integrase core domain EWM55_RS10340 PF13185 GAF domain EWM55_RS10345 PF03306 Alpha-acetolactate decarboxylase EWM55_RS10350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EWM55_RS10350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EWM55_RS10350 PF00205 Thiamine pyrophosphate enzyme, central domain EWM55_RS10360 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS10370 PF01547 Bacterial extracellular solute-binding protein EWM55_RS10420 PF01245 Ribosomal protein L19 EWM55_RS10425 PF01746 tRNA (Guanine-1)-methyltransferase EWM55_RS10430 PF01782 RimM N-terminal domain EWM55_RS10430 PF05239 PRC-barrel domain EWM55_RS10445 PF00886 Ribosomal protein S16 EWM55_RS10450 PF03358 NADPH-dependent FMN reductase EWM55_RS10455 PF01872 RibD C-terminal domain EWM55_RS10460 PF00117 Glutamine amidotransferase class-I EWM55_RS10460 PF00958 GMP synthase C terminal domain EWM55_RS10460 PF03352 Methyladenine glycosylase EWM55_RS10460 PF13302 Acetyltransferase (GNAT) domain EWM55_RS10460 PF13673 Acetyltransferase (GNAT) domain EWM55_RS10465 PF02881 SRP54-type protein, helical bundle domain EWM55_RS10465 PF02978 Signal peptide binding domain EWM55_RS10465 PF00448 SRP54-type protein, GTPase domain EWM55_RS10470 PF04297 Putative helix-turn-helix protein, YlxM / p13 like EWM55_RS10480 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS10480 PF00072 Response regulator receiver domain EWM55_RS10485 PF16736 Single Cache-like EWM55_RS10485 PF00989 PAS fold EWM55_RS10485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS10485 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS10495 PF12849 PBP superfamily domain EWM55_RS10520 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EWM55_RS10550 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS10550 PF00589 Phage integrase family EWM55_RS10565 PF17863 AAA lid domain EWM55_RS10565 PF07726 ATPase family associated with various cellular activities (AAA) EWM55_RS10585 PF00403 Heavy-metal-associated domain EWM55_RS10590 PF00403 Heavy-metal-associated domain EWM55_RS10595 PF03965 Penicillinase repressor EWM55_RS10605 PF13520 Amino acid permease EWM55_RS10610 PF00403 Heavy-metal-associated domain EWM55_RS10630 PF13472 GDSL-like Lipase/Acylhydrolase family EWM55_RS10635 PF00152 tRNA synthetases class II (D, K and N) EWM55_RS10635 PF01336 OB-fold nucleic acid binding domain EWM55_RS10640 PF00155 Aminotransferase class I and II EWM55_RS10650 PF04851 Type III restriction enzyme, res subunit EWM55_RS10650 PF00929 Exonuclease EWM55_RS10650 PF13307 Helicase C-terminal domain EWM55_RS10655 PF00313 'Cold-shock' DNA-binding domain EWM55_RS10680 PF07943 Penicillin-binding protein 5, C-terminal domain EWM55_RS10680 PF00768 D-alanyl-D-alanine carboxypeptidase EWM55_RS10690 PF00654 Voltage gated chloride channel EWM55_RS10710 PF08032 RNA 2'-O ribose methyltransferase substrate binding EWM55_RS10710 PF00588 SpoU rRNA Methylase family EWM55_RS10715 PF00708 Acylphosphatase EWM55_RS10730 PF02096 60Kd inner membrane protein EWM55_RS10785 PF17853 GGDEF-like domain EWM55_RS10785 PF12833 Helix-turn-helix domain EWM55_RS10790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EWM55_RS10790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EWM55_RS10790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EWM55_RS10790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EWM55_RS10795 PF01238 Phosphomannose isomerase type I EWM55_RS10800 PF00483 Nucleotidyl transferase EWM55_RS10800 PF01050 Mannose-6-phosphate isomerase EWM55_RS10805 PF01370 NAD dependent epimerase/dehydratase family EWM55_RS10815 PF16363 GDP-mannose 4,6 dehydratase EWM55_RS10840 PF13683 Integrase core domain EWM55_RS10840 PF01610 Transposase EWM55_RS10850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EWM55_RS10920 PF03808 Glycosyl transferase WecB/TagA/CpsF family EWM55_RS10925 PF16363 GDP-mannose 4,6 dehydratase EWM55_RS10930 PF13580 SIS domain EWM55_RS10935 PF08544 GHMP kinases C terminal EWM55_RS10935 PF00288 GHMP kinases N terminal domain EWM55_RS10940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EWM55_RS10940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EWM55_RS10940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EWM55_RS10945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EWM55_RS10945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EWM55_RS10945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EWM55_RS10955 PF02397 Bacterial sugar transferase EWM55_RS10965 PF13614 AAA domain EWM55_RS10970 PF13807 G-rich domain on putative tyrosine kinase EWM55_RS10970 PF02706 Chain length determinant protein EWM55_RS10975 PF03816 Cell envelope-related transcriptional attenuator domain EWM55_RS10985 PF02092 Glycyl-tRNA synthetase beta subunit EWM55_RS10985 PF05746 DALR anticodon binding domain EWM55_RS10990 PF02091 Glycyl-tRNA synthetase alpha subunit EWM55_RS10995 PF02565 Recombination protein O C terminal EWM55_RS10995 PF11967 Recombination protein O N terminal EWM55_RS11000 PF01926 50S ribosome-binding GTPase EWM55_RS11000 PF07650 KH domain EWM55_RS11005 PF01219 Prokaryotic diacylglycerol kinase EWM55_RS11010 PF02130 Uncharacterized protein family UPF0054 EWM55_RS11015 PF01966 HD domain EWM55_RS11015 PF07697 7TM-HD extracellular EWM55_RS11015 PF07698 7TM receptor with intracellular HD hydrolase EWM55_RS11020 PF02562 PhoH-like protein EWM55_RS11025 PF05525 Branched-chain amino acid transport protein EWM55_RS11030 PF09424 Yqey-like protein EWM55_RS11035 PF01165 Ribosomal protein S21 EWM55_RS11040 PF01475 Ferric uptake regulator family EWM55_RS11045 PF03618 Kinase/pyrophosphorylase EWM55_RS11050 PF01022 Bacterial regulatory protein, arsR family EWM55_RS11055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EWM55_RS11055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EWM55_RS11055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EWM55_RS11055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EWM55_RS11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS11065 PF00232 Glycosyl hydrolase family 1 EWM55_RS11070 PF02056 Family 4 glycosyl hydrolase EWM55_RS11070 PF11975 Family 4 glycosyl hydrolase C-terminal domain EWM55_RS11080 PF01418 Helix-turn-helix domain, rpiR family EWM55_RS11080 PF01380 SIS domain EWM55_RS11085 PF02378 Phosphotransferase system, EIIC EWM55_RS11085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS11085 PF00367 phosphotransferase system, EIIB EWM55_RS11090 PF03123 CAT RNA binding domain EWM55_RS11090 PF00874 PRD domain EWM55_RS11095 PF00664 ABC transporter transmembrane region EWM55_RS11095 PF00005 ABC transporter EWM55_RS11100 PF00005 ABC transporter EWM55_RS11100 PF00664 ABC transporter transmembrane region EWM55_RS11105 PF03672 Uncharacterised protein family (UPF0154) EWM55_RS11115 PF01566 Natural resistance-associated macrophage protein EWM55_RS11130 PF01261 Xylose isomerase-like TIM barrel EWM55_RS11135 PF00905 Penicillin binding protein transpeptidase domain EWM55_RS11135 PF00912 Transglycosylase EWM55_RS11160 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS11165 PF00557 Metallopeptidase family M24 EWM55_RS11165 PF01321 Creatinase/Prolidase N-terminal domain EWM55_RS11170 PF12732 YtxH-like protein EWM55_RS11180 PF00483 Nucleotidyl transferase EWM55_RS11185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EWM55_RS11185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EWM55_RS11190 PF01790 Prolipoprotein diacylglyceryl transferase EWM55_RS11195 PF07475 HPr Serine kinase C-terminal domain EWM55_RS11195 PF02603 HPr Serine kinase N terminus EWM55_RS11200 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV EWM55_RS11230 PF01895 PhoU domain EWM55_RS11235 PF00005 ABC transporter EWM55_RS11240 PF00005 ABC transporter EWM55_RS11245 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS11250 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS11255 PF12849 PBP superfamily domain EWM55_RS11260 PF13396 Phospholipase_D-nuclease N-terminal EWM55_RS11260 PF13091 PLD-like domain EWM55_RS11265 PF02687 FtsX-like permease family EWM55_RS11265 PF18075 FtsX extracellular domain EWM55_RS11270 PF00005 ABC transporter EWM55_RS11280 PF07517 SecA DEAD-like domain EWM55_RS11280 PF01043 SecA preprotein cross-linking domain EWM55_RS11280 PF07516 SecA Wing and Scaffold domain EWM55_RS11280 PF02810 SEC-C motif EWM55_RS11285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EWM55_RS11285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EWM55_RS11295 PF04851 Type III restriction enzyme, res subunit EWM55_RS11295 PF00271 Helicase conserved C-terminal domain EWM55_RS11300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS11310 PF09186 Domain of unknown function (DUF1949) EWM55_RS11310 PF01205 Uncharacterized protein family UPF0029 EWM55_RS11315 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS11315 PF07702 UTRA domain EWM55_RS11335 PF00480 ROK family EWM55_RS11345 PF01809 Putative membrane protein insertion efficiency factor EWM55_RS11355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EWM55_RS11385 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EWM55_RS11385 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EWM55_RS11390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EWM55_RS11390 PF02874 ATP synthase alpha/beta family, beta-barrel domain EWM55_RS11395 PF00231 ATP synthase EWM55_RS11400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EWM55_RS11400 PF02874 ATP synthase alpha/beta family, beta-barrel domain EWM55_RS11400 PF00306 ATP synthase alpha/beta chain, C terminal domain EWM55_RS11405 PF00213 ATP synthase delta (OSCP) subunit EWM55_RS11410 PF00430 ATP synthase B/B' CF(0) EWM55_RS11415 PF00137 ATP synthase subunit C EWM55_RS11420 PF00119 ATP synthase A chain EWM55_RS11425 PF01668 SmpB protein EWM55_RS11430 PF17876 Cold shock domain EWM55_RS11430 PF08206 Ribonuclease B OB domain EWM55_RS11430 PF00773 RNB domain EWM55_RS11430 PF00575 S1 RNA binding domain EWM55_RS11440 PF03840 Preprotein translocase SecG subunit EWM55_RS11445 PF14542 GCN5-related N-acetyl-transferase EWM55_RS11455 PF01156 Inosine-uridine preferring nucleoside hydrolase EWM55_RS11465 PF01385 Probable transposase EWM55_RS11465 PF07282 Putative transposase DNA-binding domain EWM55_RS11465 PF12323 Helix-turn-helix domain EWM55_RS11480 PF01546 Peptidase family M20/M25/M40 EWM55_RS11480 PF07687 Peptidase dimerisation domain EWM55_RS11490 PF00113 Enolase, C-terminal TIM barrel domain EWM55_RS11490 PF03952 Enolase, N-terminal domain EWM55_RS11495 PF00121 Triosephosphate isomerase EWM55_RS11500 PF00162 Phosphoglycerate kinase EWM55_RS11505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EWM55_RS11505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EWM55_RS11510 PF04198 Putative sugar-binding domain EWM55_RS11515 PF04552 Sigma-54, DNA binding domain EWM55_RS11515 PF04963 Sigma-54 factor, core binding domain EWM55_RS11515 PF00309 Sigma-54 factor, Activator interacting domain (AID) EWM55_RS11525 PF01522 Polysaccharide deacetylase EWM55_RS11530 PF11738 Protein of unknown function (DUF3298) EWM55_RS11530 PF13739 Deacetylase PdaC EWM55_RS11535 PF08281 Sigma-70, region 4 EWM55_RS11535 PF04542 Sigma-70 region 2 EWM55_RS11545 PF05066 HB1, ASXL, restriction endonuclease HTH domain EWM55_RS11555 PF03099 Biotin/lipoate A/B protein ligase family EWM55_RS11560 PF01966 HD domain EWM55_RS11570 PF00293 NUDIX domain EWM55_RS11575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EWM55_RS11580 PF02567 Phenazine biosynthesis-like protein EWM55_RS11585 PF02423 Ornithine cyclodeaminase/mu-crystallin family EWM55_RS11590 PF00155 Aminotransferase class I and II EWM55_RS11590 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS11595 PF02386 Cation transport protein EWM55_RS11600 PF01813 ATP synthase subunit D EWM55_RS11605 PF02874 ATP synthase alpha/beta family, beta-barrel domain EWM55_RS11605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EWM55_RS11610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EWM55_RS11610 PF02874 ATP synthase alpha/beta family, beta-barrel domain EWM55_RS11610 PF16886 ATPsynthase alpha/beta subunit N-term extension EWM55_RS11615 PF01990 ATP synthase (F/14-kDa) subunit EWM55_RS11620 PF01992 ATP synthase (C/AC39) subunit EWM55_RS11630 PF00137 ATP synthase subunit C EWM55_RS11635 PF01496 V-type ATPase 116kDa subunit family EWM55_RS11645 PF07722 Peptidase C26 EWM55_RS11650 PF06874 Firmicute fructose-1,6-bisphosphatase EWM55_RS11660 PF00005 ABC transporter EWM55_RS11660 PF13732 Domain of unknown function (DUF4162) EWM55_RS11665 PF02151 UvrB/uvrC motif EWM55_RS11665 PF08459 UvrC Helix-hairpin-helix N-terminal EWM55_RS11665 PF01541 GIY-YIG catalytic domain EWM55_RS11670 PF00085 Thioredoxin EWM55_RS11675 PF01713 Smr domain EWM55_RS11675 PF00488 MutS domain V EWM55_RS11690 PF11858 Domain of unknown function (DUF3378) EWM55_RS11690 PF01351 Ribonuclease HII EWM55_RS11695 PF00395 S-layer homology domain EWM55_RS11695 PF01520 N-acetylmuramoyl-L-alanine amidase EWM55_RS11700 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS11705 PF00005 ABC transporter EWM55_RS11715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS11715 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS11750 PF01070 FMN-dependent dehydrogenase EWM55_RS11765 PF03949 Malic enzyme, NAD binding domain EWM55_RS11765 PF00390 Malic enzyme, N-terminal domain EWM55_RS11775 PF03390 2-hydroxycarboxylate transporter family EWM55_RS11810 PF04860 Phage portal protein EWM55_RS11890 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS11890 PF00589 Phage integrase family EWM55_RS11975 PF00589 Phage integrase family EWM55_RS11975 PF14659 Phage integrase, N-terminal SAM-like domain EWM55_RS11980 PF06949 Protein of unknown function (DUF1292) EWM55_RS11985 PF03652 Holliday junction resolvase EWM55_RS11990 PF06135 IreB regulatory phosphoprotein EWM55_RS12020 PF00005 ABC transporter EWM55_RS12030 PF09323 Domain of unknown function (DUF1980) EWM55_RS12035 PF03773 Predicted permease EWM55_RS12040 PF00085 Thioredoxin EWM55_RS12045 PF06971 Putative DNA-binding protein N-terminus EWM55_RS12045 PF02629 CoA binding domain EWM55_RS12050 PF00005 ABC transporter EWM55_RS12050 PF12848 ABC transporter EWM55_RS12050 PF16326 ABC transporter C-terminal domain EWM55_RS12055 PF07470 Glycosyl Hydrolase Family 88 EWM55_RS12065 PF07470 Glycosyl Hydrolase Family 88 EWM55_RS12070 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12075 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12090 PF12833 Helix-turn-helix domain EWM55_RS12090 PF07883 Cupin domain EWM55_RS12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS12095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS12105 PF01926 50S ribosome-binding GTPase EWM55_RS12105 PF16360 GTP-binding GTPase Middle Region EWM55_RS12105 PF13167 GTP-binding GTPase N-terminal EWM55_RS12115 PF03009 Glycerophosphoryl diester phosphodiesterase family EWM55_RS12125 PF00574 Clp protease EWM55_RS12130 PF00132 Bacterial transferase hexapeptide (six repeats) EWM55_RS12140 PF00664 ABC transporter transmembrane region EWM55_RS12140 PF00005 ABC transporter EWM55_RS12145 PF00005 ABC transporter EWM55_RS12145 PF00664 ABC transporter transmembrane region EWM55_RS12150 PF07288 Protein of unknown function (DUF1447) EWM55_RS12155 PF17770 Ribonuclease J C-terminal domain EWM55_RS12155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EWM55_RS12155 PF00753 Metallo-beta-lactamase superfamily EWM55_RS12165 PF00313 'Cold-shock' DNA-binding domain EWM55_RS12170 PF04002 RadC-like JAB domain EWM55_RS12175 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS12180 PF08245 Mur ligase middle domain EWM55_RS12180 PF02875 Mur ligase family, glutamate ligase domain EWM55_RS12185 PF08264 Anticodon-binding domain of tRNA EWM55_RS12185 PF00133 tRNA synthetases class I (I, L, M and V) EWM55_RS12185 PF10458 Valyl tRNA synthetase tRNA binding arm EWM55_RS12190 PF06971 Putative DNA-binding protein N-terminus EWM55_RS12190 PF02629 CoA binding domain EWM55_RS12195 PF02568 Thiamine biosynthesis protein (ThiI) EWM55_RS12195 PF02926 THUMP domain EWM55_RS12200 PF00266 Aminotransferase class-V EWM55_RS12205 PF06160 Septation ring formation regulator, EzrA EWM55_RS12220 PF01904 Protein of unknown function DUF72 EWM55_RS12225 PF00710 Asparaginase, N-terminal EWM55_RS12225 PF17763 Glutaminase/Asparaginase C-terminal domain EWM55_RS12235 PF03881 Fructosamine kinase EWM55_RS12240 PF03051 Peptidase C1-like family EWM55_RS12315 PF00575 S1 RNA binding domain EWM55_RS12320 PF00155 Aminotransferase class I and II EWM55_RS12325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EWM55_RS12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS12340 PF04608 Phosphatidylglycerophosphatase A EWM55_RS12350 PF13344 Haloacid dehalogenase-like hydrolase EWM55_RS12355 PF06265 Protein of unknown function (DUF1027) EWM55_RS12360 PF02872 5'-nucleotidase, C-terminal domain EWM55_RS12375 PF14437 MafB19-like deaminase EWM55_RS12380 PF13556 PucR C-terminal helix-turn-helix domain EWM55_RS12390 PF01189 16S rRNA methyltransferase RsmB/F EWM55_RS12390 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EWM55_RS12390 PF17126 RsmF rRNA methyltransferase first C-terminal domain EWM55_RS12405 PF04298 Putative neutral zinc metallopeptidase EWM55_RS12410 PF08274 PhnA Zinc-Ribbon EWM55_RS12410 PF03831 PhnA domain EWM55_RS12415 PF01368 DHH family EWM55_RS12415 PF02272 DHHA1 domain EWM55_RS12420 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS12420 PF03061 Thioesterase superfamily EWM55_RS12420 PF00571 CBS domain EWM55_RS12420 PF07085 DRTGG domain EWM55_RS12425 PF12706 Beta-lactamase superfamily domain EWM55_RS12435 PF00753 Metallo-beta-lactamase superfamily EWM55_RS12435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EWM55_RS12435 PF17770 Ribonuclease J C-terminal domain EWM55_RS12445 PF02687 FtsX-like permease family EWM55_RS12445 PF12704 MacB-like periplasmic core domain EWM55_RS12450 PF00005 ABC transporter EWM55_RS12460 PF01979 Amidohydrolase family EWM55_RS12465 PF03606 C4-dicarboxylate anaerobic carrier EWM55_RS12470 PF13580 SIS domain EWM55_RS12480 PF00483 Nucleotidyl transferase EWM55_RS12490 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EWM55_RS12490 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EWM55_RS12495 PF13580 SIS domain EWM55_RS12505 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS12510 PF03609 PTS system sorbose-specific iic component EWM55_RS12515 PF03830 PTS system sorbose subfamily IIB component EWM55_RS12525 PF00158 Sigma-54 interaction domain EWM55_RS12525 PF00874 PRD domain EWM55_RS12535 PF00664 ABC transporter transmembrane region EWM55_RS12535 PF00005 ABC transporter EWM55_RS12540 PF00005 ABC transporter EWM55_RS12540 PF00664 ABC transporter transmembrane region EWM55_RS12545 PF01610 Transposase EWM55_RS12545 PF13683 Integrase core domain EWM55_RS12555 PF02142 MGS-like domain EWM55_RS12560 PF17912 MalK OB fold domain EWM55_RS12560 PF00005 ABC transporter EWM55_RS12560 PF03459 TOBE domain EWM55_RS12570 PF00398 Ribosomal RNA adenine dimethylase EWM55_RS12575 PF01751 Toprim domain EWM55_RS12575 PF13331 Domain of unknown function (DUF4093) EWM55_RS12580 PF01026 TatD related DNase EWM55_RS12585 PF13520 Amino acid permease EWM55_RS12595 PF08264 Anticodon-binding domain of tRNA EWM55_RS12595 PF01588 Putative tRNA binding domain EWM55_RS12595 PF09334 tRNA synthetases class I (M) EWM55_RS12615 PF07282 Putative transposase DNA-binding domain EWM55_RS12615 PF01385 Probable transposase EWM55_RS12615 PF12323 Helix-turn-helix domain EWM55_RS12620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EWM55_RS12620 PF00005 ABC transporter EWM55_RS12625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EWM55_RS12625 PF00005 ABC transporter EWM55_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12630 PF12911 N-terminal TM domain of oligopeptide transport permease C EWM55_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EWM55_RS12655 PF00583 Acetyltransferase (GNAT) family EWM55_RS12670 PF04055 Radical SAM superfamily EWM55_RS12675 PF09397 Ftsk gamma domain EWM55_RS12675 PF01580 FtsK/SpoIIIE family EWM55_RS12675 PF17854 FtsK alpha domain EWM55_RS12680 PF00232 Glycosyl hydrolase family 1 EWM55_RS12690 PF00497 Bacterial extracellular solute-binding proteins, family 3 EWM55_RS12695 PF00005 ABC transporter EWM55_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12710 PF05737 Collagen binding domain EWM55_RS12710 PF05738 Cna protein B-type domain EWM55_RS12710 PF17802 Prealbumin-like fold domain EWM55_RS12745 PF07859 alpha/beta hydrolase fold EWM55_RS12750 PF00464 Serine hydroxymethyltransferase EWM55_RS12755 PF03481 Putative GTP-binding controlling metal-binding EWM55_RS12755 PF01300 Telomere recombination EWM55_RS12765 PF17827 PrmC N-terminal domain EWM55_RS12765 PF05175 Methyltransferase small domain EWM55_RS12770 PF00472 RF-1 domain EWM55_RS12770 PF03462 PCRF domain EWM55_RS12775 PF00265 Thymidine kinase EWM55_RS12785 PF01209 ubiE/COQ5 methyltransferase family EWM55_RS12790 PF10502 Signal peptidase, peptidase S26 EWM55_RS12805 PF02677 Epoxyqueuosine reductase QueH EWM55_RS12810 PF02386 Cation transport protein EWM55_RS12815 PF08353 Domain of unknown function (DUF1727) EWM55_RS12815 PF08245 Mur ligase middle domain EWM55_RS12820 PF07685 CobB/CobQ-like glutamine amidotransferase domain EWM55_RS12825 PF01232 Mannitol dehydrogenase Rossmann domain EWM55_RS12825 PF08125 Mannitol dehydrogenase C-terminal domain EWM55_RS12830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS12835 PF02378 Phosphotransferase system, EIIC EWM55_RS12835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS12840 PF00005 ABC transporter EWM55_RS12850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS12855 PF05043 Mga helix-turn-helix domain EWM55_RS12855 PF08279 HTH domain EWM55_RS12855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS12860 PF02378 Phosphotransferase system, EIIC EWM55_RS12860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS12865 PF01238 Phosphomannose isomerase type I EWM55_RS12870 PF00144 Beta-lactamase EWM55_RS12890 PF00005 ABC transporter EWM55_RS12890 PF00664 ABC transporter transmembrane region EWM55_RS12895 PF00005 ABC transporter EWM55_RS12895 PF00664 ABC transporter transmembrane region EWM55_RS12910 PF02525 Flavodoxin-like fold EWM55_RS12915 PF01594 AI-2E family transporter EWM55_RS12925 PF10282 Lactonase, 7-bladed beta-propeller EWM55_RS12935 PF00884 Sulfatase EWM55_RS12950 PF11762 L-arabinose isomerase C-terminal domain EWM55_RS12950 PF02610 L-arabinose isomerase EWM55_RS12955 PF00596 Class II Aldolase and Adducin N-terminal domain EWM55_RS12965 PF00083 Sugar (and other) transporter EWM55_RS12970 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS12975 PF04616 Glycosyl hydrolases family 43 EWM55_RS12975 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain EWM55_RS12980 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EWM55_RS12990 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS12995 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13005 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EWM55_RS13015 PF02540 NAD synthase EWM55_RS13020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EWM55_RS13020 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EWM55_RS13020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EWM55_RS13035 PF07739 TipAS antibiotic-recognition domain EWM55_RS13035 PF13411 MerR HTH family regulatory protein EWM55_RS13040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EWM55_RS13040 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS13055 PF00118 TCP-1/cpn60 chaperonin family EWM55_RS13060 PF00166 Chaperonin 10 Kd subunit EWM55_RS13070 PF02378 Phosphotransferase system, EIIC EWM55_RS13075 PF13460 NAD(P)H-binding EWM55_RS13080 PF00753 Metallo-beta-lactamase superfamily EWM55_RS13095 PF13426 PAS domain EWM55_RS13095 PF00672 HAMP domain EWM55_RS13095 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS13100 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS13100 PF00072 Response regulator receiver domain EWM55_RS13105 PF02645 Uncharacterised protein, DegV family COG1307 EWM55_RS13135 PF01721 Class II bacteriocin EWM55_RS13140 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13150 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS13150 PF07729 FCD domain EWM55_RS13165 PF02421 Ferrous iron transport protein B EWM55_RS13165 PF07664 Ferrous iron transport protein B C terminus EWM55_RS13165 PF07670 Nucleoside recognition EWM55_RS13165 PF17910 FeoB cytosolic helical domain EWM55_RS13175 PF00462 Glutaredoxin EWM55_RS13180 PF08343 Ribonucleotide reductase N-terminal EWM55_RS13180 PF02867 Ribonucleotide reductase, barrel domain EWM55_RS13180 PF00317 Ribonucleotide reductase, all-alpha domain EWM55_RS13185 PF00268 Ribonucleotide reductase, small chain EWM55_RS13195 PF01594 AI-2E family transporter EWM55_RS13200 PF02308 MgtC family EWM55_RS13205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EWM55_RS13210 PF12848 ABC transporter EWM55_RS13210 PF00005 ABC transporter EWM55_RS13235 PF16320 Ribosomal protein L7/L12 dimerisation domain EWM55_RS13235 PF00542 Ribosomal protein L7/L12 C-terminal domain EWM55_RS13240 PF00466 Ribosomal protein L10 EWM55_RS13245 PF00687 Ribosomal protein L1p/L10e family EWM55_RS13250 PF03946 Ribosomal protein L11, N-terminal domain EWM55_RS13250 PF00298 Ribosomal protein L11, RNA binding domain EWM55_RS13255 PF03315 Serine dehydratase beta chain EWM55_RS13255 PF01842 ACT domain EWM55_RS13260 PF03313 Serine dehydratase alpha chain EWM55_RS13265 PF01070 FMN-dependent dehydrogenase EWM55_RS13270 PF00561 alpha/beta hydrolase fold EWM55_RS13275 PF00467 KOW motif EWM55_RS13275 PF02357 Transcription termination factor nusG EWM55_RS13280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EWM55_RS13285 PF00471 Ribosomal protein L33 EWM55_RS13300 PF00781 Diacylglycerol kinase catalytic domain EWM55_RS13315 PF00005 ABC transporter EWM55_RS13320 PF07730 Histidine kinase EWM55_RS13325 PF00072 Response regulator receiver domain EWM55_RS13325 PF00196 Bacterial regulatory proteins, luxR family EWM55_RS13335 PF13538 UvrD-like helicase C-terminal domain EWM55_RS13335 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EWM55_RS13335 PF14490 Helix-hairpin-helix containing domain EWM55_RS13345 PF00588 SpoU rRNA Methylase family EWM55_RS13350 PF01209 ubiE/COQ5 methyltransferase family EWM55_RS13355 PF03932 CutC family EWM55_RS13360 PF01769 Divalent cation transporter EWM55_RS13360 PF00571 CBS domain EWM55_RS13360 PF03448 MgtE intracellular N domain EWM55_RS13365 PF00849 RNA pseudouridylate synthase EWM55_RS13370 PF01513 ATP-NAD kinase EWM55_RS13375 PF04607 Region found in RelA / SpoT proteins EWM55_RS13380 PF01928 CYTH domain EWM55_RS13395 PF01432 Peptidase family M3 EWM55_RS13395 PF08439 Oligopeptidase F EWM55_RS13405 PF05389 Negative regulator of genetic competence (MecA) EWM55_RS13410 PF03960 ArsC family EWM55_RS13420 PF00176 SNF2 family N-terminal domain EWM55_RS13420 PF04434 SWIM zinc finger EWM55_RS13420 PF00271 Helicase conserved C-terminal domain EWM55_RS13425 PF13476 AAA domain EWM55_RS13430 PF12320 Type 5 capsule protein repressor C-terminal domain EWM55_RS13430 PF00149 Calcineurin-like phosphoesterase EWM55_RS13435 PF01553 Acyltransferase EWM55_RS13440 PF05175 Methyltransferase small domain EWM55_RS13445 PF01541 GIY-YIG catalytic domain EWM55_RS13450 PF01757 Acyltransferase family EWM55_RS13455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EWM55_RS13455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EWM55_RS13460 PF02938 GAD domain EWM55_RS13460 PF00152 tRNA synthetases class II (D, K and N) EWM55_RS13460 PF01336 OB-fold nucleic acid binding domain EWM55_RS13465 PF03129 Anticodon binding domain EWM55_RS13465 PF13393 Histidyl-tRNA synthetase EWM55_RS13475 PF00248 Aldo/keto reductase family EWM55_RS13480 PF00067 Cytochrome P450 EWM55_RS13485 PF02580 D-Tyr-tRNA(Tyr) deacylase EWM55_RS13490 PF04607 Region found in RelA / SpoT proteins EWM55_RS13490 PF13291 ACT domain EWM55_RS13490 PF02824 TGS domain EWM55_RS13500 PF04452 RNA methyltransferase EWM55_RS13515 PF02245 Methylpurine-DNA glycosylase (MPG) EWM55_RS13520 PF05496 Holliday junction DNA helicase RuvB P-loop domain EWM55_RS13520 PF12002 MgsA AAA+ ATPase C terminal EWM55_RS13520 PF16193 AAA C-terminal domain EWM55_RS13535 PF00582 Universal stress protein family EWM55_RS13550 PF12848 ABC transporter EWM55_RS13550 PF16326 ABC transporter C-terminal domain EWM55_RS13550 PF00005 ABC transporter EWM55_RS13555 PF00871 Acetokinase family EWM55_RS13560 PF02384 N-6 DNA Methylase EWM55_RS13585 PF07963 Prokaryotic N-terminal methylation motif EWM55_RS13590 PF00482 Type II secretion system (T2SS), protein F EWM55_RS13595 PF00437 Type II/IV secretion system protein EWM55_RS13600 PF01979 Amidohydrolase family EWM55_RS13600 PF13382 Adenine deaminase C-terminal domain EWM55_RS13605 PF02390 Putative methyltransferase EWM55_RS13615 PF05975 Bacterial ABC transporter protein EcsB EWM55_RS13620 PF00005 ABC transporter EWM55_RS13625 PF01230 HIT domain EWM55_RS13635 PF13145 PPIC-type PPIASE domain EWM55_RS13640 PF01966 HD domain EWM55_RS13640 PF01336 OB-fold nucleic acid binding domain EWM55_RS13645 PF13514 AAA domain EWM55_RS13650 PF00149 Calcineurin-like phosphoesterase EWM55_RS13700 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EWM55_RS13700 PF04616 Glycosyl hydrolases family 43 EWM55_RS13715 PF01738 Dienelactone hydrolase family EWM55_RS13720 PF00295 Glycosyl hydrolases family 28 EWM55_RS13725 PF07470 Glycosyl Hydrolase Family 88 EWM55_RS13730 PF13416 Bacterial extracellular solute-binding protein EWM55_RS13740 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13745 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13755 PF17853 GGDEF-like domain EWM55_RS13755 PF12833 Helix-turn-helix domain EWM55_RS13760 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS13765 PF01232 Mannitol dehydrogenase Rossmann domain EWM55_RS13765 PF08125 Mannitol dehydrogenase C-terminal domain EWM55_RS13770 PF08666 SAF domain EWM55_RS13770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EWM55_RS13775 PF02614 Glucuronate isomerase EWM55_RS13780 PF00657 GDSL-like Lipase/Acylhydrolase EWM55_RS13790 PF00664 ABC transporter transmembrane region EWM55_RS13790 PF00005 ABC transporter EWM55_RS13795 PF06133 Control of competence regulator ComK, YlbF/YmcA EWM55_RS13800 PF00905 Penicillin binding protein transpeptidase domain EWM55_RS13800 PF00912 Transglycosylase EWM55_RS13805 PF01479 S4 domain EWM55_RS13805 PF00849 RNA pseudouridylate synthase EWM55_RS13815 PF00480 ROK family EWM55_RS13820 PF07748 Glycosyl hydrolases family 38 C-terminal domain EWM55_RS13820 PF01074 Glycosyl hydrolases family 38 N-terminal domain EWM55_RS13820 PF09261 Alpha mannosidase middle domain EWM55_RS13820 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain EWM55_RS13820 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 EWM55_RS13830 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS13845 PF00072 Response regulator receiver domain EWM55_RS13845 PF12833 Helix-turn-helix domain EWM55_RS13850 PF02743 Cache domain EWM55_RS13850 PF00672 HAMP domain EWM55_RS13850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS13850 PF06580 Histidine kinase EWM55_RS13865 PF12010 Domain of unknown function (DUF3502) EWM55_RS13870 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13875 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS13885 PF01479 S4 domain EWM55_RS13885 PF00849 RNA pseudouridylate synthase EWM55_RS13890 PF01943 Polysaccharide biosynthesis protein EWM55_RS13890 PF14667 Polysaccharide biosynthesis C-terminal domain EWM55_RS13900 PF08245 Mur ligase middle domain EWM55_RS13900 PF02875 Mur ligase family, glutamate ligase domain EWM55_RS13905 PF02378 Phosphotransferase system, EIIC EWM55_RS13915 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EWM55_RS13920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EWM55_RS13920 PF05043 Mga helix-turn-helix domain EWM55_RS13920 PF08279 HTH domain EWM55_RS13920 PF00874 PRD domain EWM55_RS13925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS13970 PF06445 GyrI-like small molecule binding domain EWM55_RS13970 PF13411 MerR HTH family regulatory protein EWM55_RS13975 PF00005 ABC transporter EWM55_RS13975 PF00664 ABC transporter transmembrane region EWM55_RS13980 PF00664 ABC transporter transmembrane region EWM55_RS13980 PF00005 ABC transporter EWM55_RS13995 PF13603 Leucyl-tRNA synthetase, Domain 2 EWM55_RS13995 PF00133 tRNA synthetases class I (I, L, M and V) EWM55_RS13995 PF08264 Anticodon-binding domain of tRNA EWM55_RS13995 PF09334 tRNA synthetases class I (M) EWM55_RS14000 PF01476 LysM domain EWM55_RS14000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS14005 PF01569 PAP2 superfamily EWM55_RS14010 PF04055 Radical SAM superfamily EWM55_RS14010 PF16199 Radical_SAM C-terminal domain EWM55_RS14015 PF06962 Putative rRNA methylase EWM55_RS14060 PF00589 Phage integrase family EWM55_RS14060 PF14659 Phage integrase, N-terminal SAM-like domain EWM55_RS14065 PF00872 Transposase, Mutator family EWM55_RS14080 PF00005 ABC transporter EWM55_RS14080 PF00664 ABC transporter transmembrane region EWM55_RS14085 PF00005 ABC transporter EWM55_RS14085 PF00664 ABC transporter transmembrane region EWM55_RS14090 PF02909 Tetracyclin repressor-like, C-terminal domain EWM55_RS14090 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS14100 PF07690 Major Facilitator Superfamily EWM55_RS14105 PF00438 S-adenosylmethionine synthetase, N-terminal domain EWM55_RS14105 PF02773 S-adenosylmethionine synthetase, C-terminal domain EWM55_RS14105 PF02772 S-adenosylmethionine synthetase, central domain EWM55_RS14265 PF00152 tRNA synthetases class II (D, K and N) EWM55_RS14265 PF01336 OB-fold nucleic acid binding domain EWM55_RS14270 PF01207 Dihydrouridine synthase (Dus) EWM55_RS14275 PF01430 Hsp33 protein EWM55_RS14280 PF06480 FtsH Extracellular EWM55_RS14280 PF17862 AAA+ lid domain EWM55_RS14280 PF01434 Peptidase family M41 EWM55_RS14280 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS14285 PF00156 Phosphoribosyl transferase domain EWM55_RS14290 PF11734 TilS substrate C-terminal domain EWM55_RS14290 PF01171 PP-loop family EWM55_RS14295 PF00575 S1 RNA binding domain EWM55_RS14305 PF01479 S4 domain EWM55_RS14310 PF14667 Polysaccharide biosynthesis C-terminal domain EWM55_RS14310 PF01943 Polysaccharide biosynthesis protein EWM55_RS14315 PF00270 DEAD/DEAH box helicase EWM55_RS14315 PF00271 Helicase conserved C-terminal domain EWM55_RS14315 PF17757 UvrB interaction domain EWM55_RS14315 PF03461 TRCF domain EWM55_RS14315 PF02559 CarD-like/TRCF domain EWM55_RS14320 PF01195 Peptidyl-tRNA hydrolase EWM55_RS14325 PF00056 lactate/malate dehydrogenase, NAD binding domain EWM55_RS14325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EWM55_RS14335 PF01709 Transcriptional regulator EWM55_RS14350 PF00877 NlpC/P60 family EWM55_RS14360 PF04085 rod shape-determining protein MreC EWM55_RS14370 PF00834 Ribulose-phosphate 3 epimerase family EWM55_RS14375 PF03193 RsgA GTPase EWM55_RS14375 PF16745 RsgA N-terminal domain EWM55_RS14380 PF03793 PASTA domain EWM55_RS14380 PF00069 Protein kinase domain EWM55_RS14390 PF01029 NusB family EWM55_RS14390 PF01189 16S rRNA methyltransferase RsmB/F EWM55_RS14395 PF02911 Formyl transferase, C-terminal domain EWM55_RS14395 PF00551 Formyl transferase EWM55_RS14400 PF01327 Polypeptide deformylase EWM55_RS14405 PF04851 Type III restriction enzyme, res subunit EWM55_RS14405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EWM55_RS14405 PF18074 Primosomal protein N C-terminal domain EWM55_RS14405 PF17764 3′ DNA-binding domain (3′BD) EWM55_RS14405 PF00271 Helicase conserved C-terminal domain EWM55_RS14410 PF01192 RNA polymerase Rpb6 EWM55_RS14415 PF00625 Guanylate kinase EWM55_RS14440 PF08340 Domain of unknown function (DUF1732) EWM55_RS14440 PF03755 YicC-like family, N-terminal region EWM55_RS14450 PF01734 Patatin-like phospholipase EWM55_RS14465 PF09515 Thiamine transporter protein (Thia_YuaJ) EWM55_RS14470 PF14572 Phosphoribosyl synthetase-associated domain EWM55_RS14470 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EWM55_RS14475 PF00483 Nucleotidyl transferase EWM55_RS14475 PF00132 Bacterial transferase hexapeptide (six repeats) EWM55_RS14480 PF09182 Bacterial purine repressor, N-terminal EWM55_RS14480 PF00156 Phosphoribosyl transferase domain EWM55_RS14485 PF00950 ABC 3 transport family EWM55_RS14490 PF00005 ABC transporter EWM55_RS14495 PF01297 Zinc-uptake complex component A periplasmic EWM55_RS14495 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EWM55_RS14500 PF08544 GHMP kinases C terminal EWM55_RS14500 PF00288 GHMP kinases N terminal domain EWM55_RS14505 PF09924 Uncharacterised conserved protein (DUF2156) EWM55_RS14505 PF03706 Lysylphosphatidylglycerol synthase TM region EWM55_RS14510 PF14748 Pyrroline-5-carboxylate reductase dimerisation EWM55_RS14510 PF03807 NADP oxidoreductase coenzyme F420-dependent EWM55_RS14515 PF12072 Domain of unknown function (DUF3552) EWM55_RS14515 PF00013 KH domain EWM55_RS14515 PF01966 HD domain EWM55_RS14520 PF00154 recA bacterial DNA recombination protein EWM55_RS14525 PF00994 Probable molybdopterin binding domain EWM55_RS14525 PF02464 Competence-damaged protein EWM55_RS14525 PF18146 Damage-inducible protein CinA KH domain EWM55_RS14530 PF01066 CDP-alcohol phosphatidyltransferase EWM55_RS14540 PF13464 Domain of unknown function (DUF4115) EWM55_RS14545 PF05193 Peptidase M16 inactive domain EWM55_RS14545 PF00675 Insulinase (Peptidase family M16) EWM55_RS14550 PF05193 Peptidase M16 inactive domain EWM55_RS14555 PF01741 Large-conductance mechanosensitive channel, MscL EWM55_RS14560 PF13673 Acetyltransferase (GNAT) domain EWM55_RS14565 PF06257 Biofilm formation stimulator VEG EWM55_RS14575 PF05991 YacP-like NYN domain EWM55_RS14580 PF00588 SpoU rRNA Methylase family EWM55_RS14580 PF08032 RNA 2'-O ribose methyltransferase substrate binding EWM55_RS14585 PF00636 Ribonuclease III domain EWM55_RS14590 PF09190 DALR domain EWM55_RS14590 PF01406 tRNA synthetases class I (C) catalytic domain EWM55_RS14595 PF06426 Serine acetyltransferase, N-terminal EWM55_RS14595 PF00132 Bacterial transferase hexapeptide (six repeats) EWM55_RS14600 PF00749 tRNA synthetases class I (E and Q), catalytic domain EWM55_RS14610 PF18073 Rubredoxin metal binding domain EWM55_RS14615 PF00692 dUTPase EWM55_RS14625 PF00696 Amino acid kinase family EWM55_RS14630 PF00171 Aldehyde dehydrogenase family EWM55_RS14670 PF00005 ABC transporter EWM55_RS14680 PF00881 Nitroreductase family EWM55_RS14690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS14690 PF01476 LysM domain EWM55_RS14695 PF00106 short chain dehydrogenase EWM55_RS14700 PF12464 Maltose acetyltransferase EWM55_RS14700 PF14602 Hexapeptide repeat of succinyl-transferase EWM55_RS14700 PF00132 Bacterial transferase hexapeptide (six repeats) EWM55_RS14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EWM55_RS14705 PF03466 LysR substrate binding domain EWM55_RS14710 PF03123 CAT RNA binding domain EWM55_RS14710 PF00874 PRD domain EWM55_RS14715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EWM55_RS14715 PF00367 phosphotransferase system, EIIB EWM55_RS14715 PF02378 Phosphotransferase system, EIIC EWM55_RS14720 PF05368 NmrA-like family EWM55_RS14735 PF06445 GyrI-like small molecule binding domain EWM55_RS14735 PF12833 Helix-turn-helix domain EWM55_RS14750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EWM55_RS14750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EWM55_RS14755 PF03591 AzlC protein EWM55_RS14765 PF00107 Zinc-binding dehydrogenase EWM55_RS14765 PF08240 Alcohol dehydrogenase GroES-like domain EWM55_RS14780 PF01207 Dihydrouridine synthase (Dus) EWM55_RS14790 PF01061 ABC-2 type transporter EWM55_RS14795 PF00005 ABC transporter EWM55_RS14800 PF05192 MutS domain III EWM55_RS14800 PF05188 MutS domain II EWM55_RS14800 PF01624 MutS domain I EWM55_RS14800 PF05190 MutS family domain IV EWM55_RS14800 PF00488 MutS domain V EWM55_RS14805 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS14810 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS14810 PF00072 Response regulator receiver domain EWM55_RS14820 PF00005 ABC transporter EWM55_RS14955 PF00145 C-5 cytosine-specific DNA methylase EWM55_RS14960 PF00145 C-5 cytosine-specific DNA methylase EWM55_RS14970 PF18106 Rolling Circle replication initiation protein N-terminal domain EWM55_RS14970 PF02486 Replication initiation factor EWM55_RS15010 PF00877 NlpC/P60 family EWM55_RS15035 PF07690 Major Facilitator Superfamily EWM55_RS15045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EWM55_RS15045 PF05257 CHAP domain EWM55_RS15050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS15050 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS15055 PF04650 YSIRK type signal peptide EWM55_RS15055 PF00746 LPXTG cell wall anchor motif EWM55_RS15055 PF17480 AlphaC C-terminal EWM55_RS15055 PF08829 Alpha C protein N terminal EWM55_RS15065 PF12833 Helix-turn-helix domain EWM55_RS15105 PF13683 Integrase core domain EWM55_RS15105 PF01610 Transposase EWM55_RS15115 PF02492 CobW/HypB/UreG, nucleotide-binding domain EWM55_RS15115 PF07683 Cobalamin synthesis protein cobW C-terminal domain EWM55_RS15135 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EWM55_RS15135 PF01297 Zinc-uptake complex component A periplasmic EWM55_RS15145 PF07683 Cobalamin synthesis protein cobW C-terminal domain EWM55_RS15145 PF02492 CobW/HypB/UreG, nucleotide-binding domain EWM55_RS15150 PF00471 Ribosomal protein L33 EWM55_RS15160 PF01783 Ribosomal L32p protein family EWM55_RS15165 PF00253 Ribosomal protein S14p/S29e EWM55_RS15170 PF00664 ABC transporter transmembrane region EWM55_RS15170 PF00005 ABC transporter EWM55_RS15175 PF00664 ABC transporter transmembrane region EWM55_RS15175 PF00005 ABC transporter EWM55_RS15185 PF00005 ABC transporter EWM55_RS15195 PF00440 Bacterial regulatory proteins, tetR family EWM55_RS15205 PF01297 Zinc-uptake complex component A periplasmic EWM55_RS15210 PF00950 ABC 3 transport family EWM55_RS15215 PF00005 ABC transporter EWM55_RS15220 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EWM55_RS15225 PF01797 Transposase IS200 like EWM55_RS15255 PF02423 Ornithine cyclodeaminase/mu-crystallin family EWM55_RS15265 PF01978 Sugar-specific transcriptional regulator TrmB EWM55_RS15265 PF11495 Archaeal transcriptional regulator TrmB EWM55_RS15280 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS15280 PF00589 Phage integrase family EWM55_RS15285 PF00380 Ribosomal protein S9/S16 EWM55_RS15290 PF00572 Ribosomal protein L13 EWM55_RS15295 PF00210 Ferritin-like domain EWM55_RS15300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EWM55_RS15300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EWM55_RS15305 PF06750 Bacterial Peptidase A24 N-terminal domain EWM55_RS15305 PF01478 Type IV leader peptidase family EWM55_RS15310 PF01625 Peptide methionine sulfoxide reductase EWM55_RS15315 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS15320 PF02595 Glycerate kinase family EWM55_RS15325 PF03636 Glycosyl hydrolase family 65, N-terminal domain EWM55_RS15325 PF03632 Glycosyl hydrolase family 65 central catalytic domain EWM55_RS15325 PF03633 Glycosyl hydrolase family 65, C-terminal domain EWM55_RS15330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EWM55_RS15330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EWM55_RS15335 PF01261 Xylose isomerase-like TIM barrel EWM55_RS15340 PF00107 Zinc-binding dehydrogenase EWM55_RS15345 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS15350 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS15355 PF01547 Bacterial extracellular solute-binding protein EWM55_RS15360 PF00128 Alpha amylase, catalytic domain EWM55_RS15365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EWM55_RS15365 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS15370 PF04997 RNA polymerase Rpb1, domain 1 EWM55_RS15370 PF00623 RNA polymerase Rpb1, domain 2 EWM55_RS15370 PF04983 RNA polymerase Rpb1, domain 3 EWM55_RS15370 PF04998 RNA polymerase Rpb1, domain 5 EWM55_RS15370 PF05000 RNA polymerase Rpb1, domain 4 EWM55_RS15375 PF04560 RNA polymerase Rpb2, domain 7 EWM55_RS15375 PF00562 RNA polymerase Rpb2, domain 6 EWM55_RS15375 PF10385 RNA polymerase beta subunit external 1 domain EWM55_RS15375 PF04565 RNA polymerase Rpb2, domain 3 EWM55_RS15375 PF04561 RNA polymerase Rpb2, domain 2 EWM55_RS15375 PF04563 RNA polymerase beta subunit EWM55_RS15390 PF02653 Branched-chain amino acid transport system / permease component EWM55_RS15395 PF00005 ABC transporter EWM55_RS15405 PF02237 Biotin protein ligase C terminal domain EWM55_RS15405 PF03099 Biotin/lipoate A/B protein ligase family EWM55_RS15405 PF08279 HTH domain EWM55_RS15420 PF00348 Polyprenyl synthetase EWM55_RS15440 PF04205 FMN-binding domain EWM55_RS15445 PF02424 ApbE family EWM55_RS15460 PF07992 Pyridine nucleotide-disulphide oxidoreductase EWM55_RS15460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EWM55_RS15465 PF16325 Peptidase family U32 C-terminal domain EWM55_RS15465 PF01136 Peptidase family U32 EWM55_RS15470 PF01136 Peptidase family U32 EWM55_RS15475 PF02861 Clp amino terminal domain, pathogenicity island component EWM55_RS15475 PF17871 AAA lid domain EWM55_RS15475 PF10431 C-terminal, D2-small domain, of ClpB protein EWM55_RS15475 PF00004 ATPase family associated with various cellular activities (AAA) EWM55_RS15475 PF07724 AAA domain (Cdc48 subfamily) EWM55_RS15480 PF17727 CtsR C-terminal dimerization domain EWM55_RS15480 PF05848 CtsR N-terminal HTH domain EWM55_RS15550 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS15550 PF00072 Response regulator receiver domain EWM55_RS15555 PF13426 PAS domain EWM55_RS15555 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS15555 PF00672 HAMP domain EWM55_RS15560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EWM55_RS15560 PF02403 Seryl-tRNA synthetase N-terminal domain EWM55_RS15570 PF00478 IMP dehydrogenase / GMP reductase domain EWM55_RS15570 PF00571 CBS domain EWM55_RS15585 PF01926 50S ribosome-binding GTPase EWM55_RS15585 PF06071 Protein of unknown function (DUF933) EWM55_RS15590 PF06107 Bacterial protein of unknown function (DUF951) EWM55_RS15595 PF02195 ParB-like nuclease domain EWM55_RS15595 PF17762 HTH domain found in ParB protein EWM55_RS15600 PF13614 AAA domain EWM55_RS15605 PF02527 rRNA small subunit methyltransferase G EWM55_RS15610 PF13932 GidA associated domain EWM55_RS15610 PF01134 Glucose inhibited division protein A EWM55_RS15615 PF01926 50S ribosome-binding GTPase EWM55_RS15615 PF10396 GTP-binding protein TrmE N-terminus EWM55_RS15615 PF12631 MnmE helical domain EWM55_RS15625 PF01424 R3H domain EWM55_RS15625 PF14804 Jag N-terminus EWM55_RS15630 PF02096 60Kd inner membrane protein EWM55_RS15635 PF00825 Ribonuclease P EWM55_RS15640 PF00468 Ribosomal protein L34 EWM55_RS15660 PF17400 Family of unknown function (DUF5406) EWM55_RS15690 PF04203 Sortase domain EWM55_RS15710 PF13683 Integrase core domain EWM55_RS15710 PF01610 Transposase EWM55_RS15745 PF12696 TraM recognition site of TraD and TraG EWM55_RS15780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EWM55_RS15835 PF18840 Large polyvalent protein associated domain 25 EWM55_RS15840 PF13154 Protein of unknown function (DUF3991) EWM55_RS15860 PF00436 Single-strand binding protein family EWM55_RS15865 PF00436 Single-strand binding protein family EWM55_RS15925 PF00239 Resolvase, N terminal domain EWM55_RS15925 PF02796 Helix-turn-helix domain of resolvase EWM55_RS15930 PF02899 Phage integrase, N-terminal SAM-like domain EWM55_RS15930 PF00589 Phage integrase family EWM55_RS15945 PF13673 Acetyltransferase (GNAT) domain EWM55_RS15955 PF00872 Transposase, Mutator family EWM55_RS15975 PF00239 Resolvase, N terminal domain EWM55_RS15975 PF02796 Helix-turn-helix domain of resolvase EWM55_RS15980 PF00239 Resolvase, N terminal domain EWM55_RS15980 PF02796 Helix-turn-helix domain of resolvase EWM55_RS16000 PF00455 DeoR C terminal sensor domain EWM55_RS16000 PF08220 DeoR-like helix-turn-helix domain EWM55_RS16005 PF02502 Ribose/Galactose Isomerase EWM55_RS16010 PF02502 Ribose/Galactose Isomerase EWM55_RS16015 PF00294 pfkB family carbohydrate kinase EWM55_RS16020 PF01791 DeoC/LacD family aldolase EWM55_RS16025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EWM55_RS16030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EWM55_RS16030 PF02378 Phosphotransferase system, EIIC EWM55_RS16035 PF00232 Glycosyl hydrolase family 1 EWM55_RS16045 PF01263 Aldose 1-epimerase EWM55_RS16070 PF13495 Phage integrase, N-terminal SAM-like domain EWM55_RS16070 PF00589 Phage integrase family EWM55_RS16095 PF00128 Alpha amylase, catalytic domain EWM55_RS16100 PF00128 Alpha amylase, catalytic domain EWM55_RS16105 PF16875 Glycosyl hydrolase family 36 N-terminal domain EWM55_RS16105 PF16874 Glycosyl hydrolase family 36 C-terminal domain EWM55_RS16110 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS16115 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS16120 PF01547 Bacterial extracellular solute-binding protein EWM55_RS16125 PF11975 Family 4 glycosyl hydrolase C-terminal domain EWM55_RS16125 PF02056 Family 4 glycosyl hydrolase EWM55_RS16130 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS16140 PF01547 Bacterial extracellular solute-binding protein EWM55_RS16145 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS16150 PF00005 ABC transporter EWM55_RS16150 PF17755 UvrA DNA-binding domain EWM55_RS16150 PF17760 UvrA interaction domain EWM55_RS16160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EWM55_RS16170 PF00589 Phage integrase family EWM55_RS16175 PF00872 Transposase, Mutator family EWM55_RS16235 PF13610 DDE domain EWM55_RS16290 PF00480 ROK family EWM55_RS16295 PF08244 Glycosyl hydrolases family 32 C terminal EWM55_RS16295 PF00251 Glycosyl hydrolases family 32 N-terminal domain EWM55_RS16300 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS16305 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS16315 PF00356 Bacterial regulatory proteins, lacI family EWM55_RS16330 PF02796 Helix-turn-helix domain of resolvase EWM55_RS16330 PF00239 Resolvase, N terminal domain EWM55_RS16365 PF00929 Exonuclease EWM55_RS16385 PF13610 DDE domain EWM55_RS16390 PF04205 FMN-binding domain EWM55_RS16390 PF00890 FAD binding domain EWM55_RS16390 PF03358 NADPH-dependent FMN reductase EWM55_RS16395 PF00890 FAD binding domain EWM55_RS16395 PF04205 FMN-binding domain EWM55_RS16395 PF03358 NADPH-dependent FMN reductase EWM55_RS16400 PF02424 ApbE family EWM55_RS16415 PF03606 C4-dicarboxylate anaerobic carrier EWM55_RS16435 PF07702 UTRA domain EWM55_RS16435 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS16440 PF00294 pfkB family carbohydrate kinase EWM55_RS16445 PF01380 SIS domain EWM55_RS16450 PF01610 Transposase EWM55_RS16450 PF13683 Integrase core domain EWM55_RS16490 PF13419 Haloacid dehalogenase-like hydrolase EWM55_RS16495 PF03610 PTS system fructose IIA component EWM55_RS16495 PF00158 Sigma-54 interaction domain EWM55_RS16495 PF00874 PRD domain EWM55_RS16500 PF01380 SIS domain EWM55_RS16505 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS16510 PF03609 PTS system sorbose-specific iic component EWM55_RS16515 PF03830 PTS system sorbose subfamily IIB component EWM55_RS16525 PF17770 Ribonuclease J C-terminal domain EWM55_RS16525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EWM55_RS16525 PF00753 Metallo-beta-lactamase superfamily EWM55_RS16555 PF00872 Transposase, Mutator family EWM55_RS16565 PF00872 Transposase, Mutator family EWM55_RS16580 PF03613 PTS system mannose/fructose/sorbose family IID component EWM55_RS16585 PF03609 PTS system sorbose-specific iic component EWM55_RS16605 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS16605 PF07702 UTRA domain EWM55_RS16610 PF00392 Bacterial regulatory proteins, gntR family EWM55_RS16610 PF00155 Aminotransferase class I and II EWM55_RS16620 PF02796 Helix-turn-helix domain of resolvase EWM55_RS16620 PF00239 Resolvase, N terminal domain EWM55_RS16635 PF02796 Helix-turn-helix domain of resolvase EWM55_RS16635 PF00239 Resolvase, N terminal domain EWM55_RS16690 PF00436 Single-strand binding protein family EWM55_RS16710 PF13154 Protein of unknown function (DUF3991) EWM55_RS16715 PF18840 Large polyvalent protein associated domain 25 EWM55_RS16765 PF13610 DDE domain EWM55_RS16770 PF01427 D-ala-D-ala dipeptidase EWM55_RS16775 PF01820 D-ala D-ala ligase N-terminus EWM55_RS16775 PF07478 D-ala D-ala ligase C-terminus EWM55_RS16780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EWM55_RS16780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EWM55_RS16790 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS16795 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS16795 PF00072 Response regulator receiver domain EWM55_RS16840 PF13610 DDE domain EWM55_RS16895 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) EWM55_RS16915 PF18008 Replication initiator protein A C-terminal domain EWM55_RS16915 PF06970 Replication initiator protein A (RepA) N-terminus EWM55_RS16925 PF13614 AAA domain EWM55_RS16945 PF11798 IMS family HHH motif EWM55_RS16945 PF11799 impB/mucB/samB family C-terminal domain EWM55_RS16945 PF00817 impB/mucB/samB family EWM55_RS16950 PF00239 Resolvase, N terminal domain EWM55_RS16950 PF02796 Helix-turn-helix domain of resolvase EWM55_RS16960 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EWM55_RS17010 PF00239 Resolvase, N terminal domain EWM55_RS17010 PF02796 Helix-turn-helix domain of resolvase EWM55_RS17025 PF01022 Bacterial regulatory protein, arsR family EWM55_RS17030 PF04892 VanZ like family EWM55_RS17035 PF02557 D-alanyl-D-alanine carboxypeptidase EWM55_RS17040 PF13610 DDE domain EWM55_RS17055 PF01636 Phosphotransferase enzyme family EWM55_RS17070 PF13610 DDE domain EWM55_RS17075 PF02796 Helix-turn-helix domain of resolvase EWM55_RS17075 PF00239 Resolvase, N terminal domain EWM55_RS17085 PF00533 BRCA1 C Terminus (BRCT) domain EWM55_RS17085 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EWM55_RS17085 PF12826 Helix-hairpin-helix motif EWM55_RS17085 PF03120 NAD-dependent DNA ligase OB-fold domain EWM55_RS17085 PF01653 NAD-dependent DNA ligase adenylation domain EWM55_RS17090 PF00239 Resolvase, N terminal domain EWM55_RS17090 PF02796 Helix-turn-helix domain of resolvase EWM55_RS17100 PF01471 Putative peptidoglycan binding domain EWM55_RS17100 PF08924 Domain of unknown function (DUF1906) EWM55_RS17145 PF00512 His Kinase A (phospho-acceptor) domain EWM55_RS17145 PF00672 HAMP domain EWM55_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EWM55_RS17150 PF00072 Response regulator receiver domain EWM55_RS17150 PF00486 Transcriptional regulatory protein, C terminal EWM55_RS17165 PF00266 Aminotransferase class-V EWM55_RS17180 PF08402 TOBE domain EWM55_RS17180 PF00005 ABC transporter EWM55_RS17190 PF00528 Binding-protein-dependent transport system inner membrane component EWM55_RS17205 PF02811 PHP domain EWM55_RS17230 PF04055 Radical SAM superfamily EWM55_RS17235 PF04055 Radical SAM superfamily EWM55_RS17255 PF00005 ABC transporter EWM55_RS17275 PF08534 Redoxin EWM55_RS17350 PF16875 Glycosyl hydrolase family 36 N-terminal domain EWM55_RS17350 PF16874 Glycosyl hydrolase family 36 C-terminal domain EWM55_RS17355 PF12833 Helix-turn-helix domain EWM55_RS17355 PF02311 AraC-like ligand binding domain