CDW54_RS00015 SM00062 Bacterial periplasmic substrate-binding proteins CDW54_RS00015 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDW54_RS00020 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00030 SM00873 B3/4 domain CDW54_RS00030 SM00874 tRNA synthetase B5 domain CDW54_RS00030 SM00896 Ferredoxin-fold anticodon binding domain CDW54_RS00140 SM00257 Lysin motif CDW54_RS00170 SM00487 DEAD-like helicases superfamily CDW54_RS00170 SM00488 CDW54_RS00170 CDW54_RS00170 SM00491 CDW54_RS00170 CDW54_RS00175 SM00849 Metallo-beta-lactamase superfamily CDW54_RS00180 SM00855 Phosphoglycerate mutase family CDW54_RS00235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDW54_RS00270 SM00878 Biotin carboxylase C-terminal domain CDW54_RS00285 SM00341 Helicase and RNase D C-terminal CDW54_RS00285 SM00487 DEAD-like helicases superfamily CDW54_RS00285 SM00490 helicase superfamily c-terminal domain CDW54_RS00285 SM00956 CDW54_RS00285 CDW54_RS00290 SM00838 Elongation factor G C-terminus CDW54_RS00315 SM00861 Transketolase, pyrimidine binding domain CDW54_RS00330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS00340 SM01240 CDW54_RS00340 CDW54_RS00350 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00380 SM01209 CDW54_RS00380 CDW54_RS00380 SM01210 CDW54_RS00380 CDW54_RS00385 SM00798 AICARFT/IMPCHase bienzyme CDW54_RS00385 SM00851 MGS-like domain CDW54_RS00410 SM01211 CDW54_RS00410 CDW54_RS00430 SM00998 Adenylosuccinate lyase C-terminus CDW54_RS00440 SM01001 AIR carboxylase CDW54_RS00490 SM00047 Lysozyme subfamily 2 CDW54_RS00525 SM00244 prohibitin homologues CDW54_RS00535 SM00387 Histidine kinase-like ATPases CDW54_RS00540 SM00448 cheY-homologous receiver domain CDW54_RS00560 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS00600 SM00257 Lysin motif CDW54_RS00610 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00630 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00665 SM00354 helix_turn _helix lactose operon repressor CDW54_RS00700 SM01131 CDW54_RS00700 CDW54_RS00715 SM00434 DNA Topoisomerase IV CDW54_RS00720 SM00387 Histidine kinase-like ATPases CDW54_RS00720 SM00433 TopoisomeraseII CDW54_RS00725 SM00881 CoA binding domain CDW54_RS00730 SM01207 CDW54_RS00730 CDW54_RS00745 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00745 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS00765 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDW54_RS00765 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDW54_RS00765 SM00493 CDW54_RS00765 CDW54_RS00855 SM00382 ATPases associated with a variety of cellular activities CDW54_RS00890 SM00914 CDW54_RS00890 CDW54_RS00895 SM00028 Tetratricopeptide repeats CDW54_RS00910 SM00411 bacterial (prokaryotic) histone like domain CDW54_RS00920 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS00930 SM00257 Lysin motif CDW54_RS00935 SM00487 DEAD-like helicases superfamily CDW54_RS00935 SM00490 helicase superfamily c-terminal domain CDW54_RS00970 SM00363 S4 RNA-binding domain CDW54_RS01015 SM00400 zinc finger CDW54_RS01015 SM00493 CDW54_RS01015 CDW54_RS01090 SM00831 Cation transporter/ATPase, N-terminus CDW54_RS01095 SM00155 Phospholipase D. Active site motifs. CDW54_RS01150 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS01150 SM00866 CDW54_RS01150 CDW54_RS01170 SM01007 Class II Aldolase and Adducin N-terminal domain CDW54_RS01180 SM01007 Class II Aldolase and Adducin N-terminal domain CDW54_RS01190 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDW54_RS01215 SM00420 helix_turn_helix, Deoxyribose operon repressor CDW54_RS01215 SM01134 CDW54_RS01215 CDW54_RS01220 SM00028 Tetratricopeptide repeats CDW54_RS01220 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS01265 SM01061 CAT RNA binding domain CDW54_RS01375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDW54_RS01375 SM00387 Histidine kinase-like ATPases CDW54_RS01375 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS01380 SM00448 cheY-homologous receiver domain CDW54_RS01380 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS01385 SM01350 CDW54_RS01385 CDW54_RS01415 SM00481 DNA polymerase alpha chain like domain CDW54_RS01450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDW54_RS01500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS01510 SM01103 CDW54_RS01510 CDW54_RS01535 SM00878 Biotin carboxylase C-terminal domain CDW54_RS01550 SM00825 Beta-ketoacyl synthase CDW54_RS01555 SM00822 CDW54_RS01555 CDW54_RS01560 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDW54_RS01575 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS01580 SM00465 GIY-YIG type nucleases (URI domain) CDW54_RS01615 SM00382 ATPases associated with a variety of cellular activities CDW54_RS01615 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS01645 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS01645 SM01091 Transporter associated domain CDW54_RS01675 SM00478 endonuclease III CDW54_RS01675 SM00525 CDW54_RS01675 CDW54_RS01710 SM00357 Cold shock protein domain CDW54_RS01750 SM00421 helix_turn_helix, Lux Regulon CDW54_RS01750 SM00448 cheY-homologous receiver domain CDW54_RS01755 SM00387 Histidine kinase-like ATPases CDW54_RS01845 SM00382 ATPases associated with a variety of cellular activities CDW54_RS01980 SM00382 ATPases associated with a variety of cellular activities CDW54_RS01985 SM00487 DEAD-like helicases superfamily CDW54_RS01985 SM00490 helicase superfamily c-terminal domain CDW54_RS02005 SM00529 Helix-turn-helix diphteria tox regulatory element CDW54_RS02005 SM00899 CDW54_RS02005 CDW54_RS02025 SM00363 S4 RNA-binding domain CDW54_RS02045 SM00864 Tubulin/FtsZ family, GTPase domain CDW54_RS02045 SM00865 Tubulin/FtsZ family, C-terminal domain CDW54_RS02050 SM00842 Cell division protein FtsA CDW54_RS02075 SM00740 CDW54_RS02075 CDW54_RS02190 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02210 SM00986 Uracil DNA glycosylase superfamily CDW54_RS02210 SM00987 UreE urease accessory protein, C-terminal domain CDW54_RS02250 SM00849 Metallo-beta-lactamase superfamily CDW54_RS02300 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02350 SM00493 CDW54_RS02350 CDW54_RS02360 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02385 SM00419 helix_turn_helix, cAMP Regulatory protein CDW54_RS02405 SM00420 helix_turn_helix, Deoxyribose operon repressor CDW54_RS02405 SM01134 CDW54_RS02405 CDW54_RS02435 SM00357 Cold shock protein domain CDW54_RS02435 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02435 SM00959 Rho termination factor, N-terminal domain CDW54_RS02450 SM00387 Histidine kinase-like ATPases CDW54_RS02450 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS02480 SM01230 CDW54_RS02480 CDW54_RS02485 SM00422 helix_turn_helix, mercury resistance CDW54_RS02525 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02530 SM00382 ATPases associated with a variety of cellular activities CDW54_RS02540 SM00849 Metallo-beta-lactamase superfamily CDW54_RS02550 SM00357 Cold shock protein domain CDW54_RS02575 SM00881 CoA binding domain CDW54_RS02580 SM00981 CDW54_RS02580 CDW54_RS02610 SM00870 CDW54_RS02610 CDW54_RS02690 SM00857 Resolvase, N terminal domain CDW54_RS02720 SM00354 helix_turn _helix lactose operon repressor CDW54_RS02725 SM00640 Glycosyl hydrolases family 32 CDW54_RS02765 SM00487 DEAD-like helicases superfamily CDW54_RS02775 SM00354 helix_turn _helix lactose operon repressor CDW54_RS02905 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS03005 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS03010 SM00849 Metallo-beta-lactamase superfamily CDW54_RS03020 SM00849 Metallo-beta-lactamase superfamily CDW54_RS03035 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03125 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03130 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03140 SM00851 MGS-like domain CDW54_RS03145 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03155 SM00650 Ribosomal RNA adenine dimethylases CDW54_RS03160 SM00493 CDW54_RS03160 CDW54_RS03205 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03210 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03260 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03260 SM00843 CDW54_RS03260 CDW54_RS03270 SM00062 Bacterial periplasmic substrate-binding proteins CDW54_RS03270 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDW54_RS03275 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03360 SM00937 CDW54_RS03360 CDW54_RS03430 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03475 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03480 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03490 SM00450 Rhodanese Homology Domain CDW54_RS03540 SM01007 Class II Aldolase and Adducin N-terminal domain CDW54_RS03555 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS03565 SM00813 Alpha-L-arabinofuranosidase C-terminus CDW54_RS03590 SM00813 Alpha-L-arabinofuranosidase C-terminus CDW54_RS03595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDW54_RS03620 SM00422 helix_turn_helix, mercury resistance CDW54_RS03625 SM00354 helix_turn _helix lactose operon repressor CDW54_RS03640 SM00883 Chaperonin 10 Kd subunit CDW54_RS03660 SM00849 Metallo-beta-lactamase superfamily CDW54_RS03675 SM00091 PAS domain CDW54_RS03675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDW54_RS03675 SM00387 Histidine kinase-like ATPases CDW54_RS03675 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS03680 SM00448 cheY-homologous receiver domain CDW54_RS03680 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS03720 SM00357 Cold shock protein domain CDW54_RS03730 SM00644 CDW54_RS03730 CDW54_RS03750 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03755 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS03775 SM00899 CDW54_RS03775 CDW54_RS03810 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03840 SM00649 Ribosomal protein L11/L12 CDW54_RS03865 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDW54_RS03865 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDW54_RS03880 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS03890 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDW54_RS03905 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03915 SM00421 helix_turn_helix, Lux Regulon CDW54_RS03915 SM00448 cheY-homologous receiver domain CDW54_RS03925 SM00382 ATPases associated with a variety of cellular activities CDW54_RS03930 SM00855 Phosphoglycerate mutase family CDW54_RS03950 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS03950 SM00924 MgtE intracellular N domain CDW54_RS03965 SM00954 Region found in RelA / SpoT proteins CDW54_RS03970 SM01118 CDW54_RS03970 CDW54_RS04005 SM00487 DEAD-like helicases superfamily CDW54_RS04005 SM00490 helicase superfamily c-terminal domain CDW54_RS04020 SM00563 Phosphate acyltransferases CDW54_RS04030 SM00465 GIY-YIG type nucleases (URI domain) CDW54_RS04075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS04075 SM00954 Region found in RelA / SpoT proteins CDW54_RS04105 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04135 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04180 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04205 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS04270 SM00710 Parallel beta-helix repeats CDW54_RS04305 SM00710 Parallel beta-helix repeats CDW54_RS04340 SM00342 helix_turn_helix, arabinose operon control protein CDW54_RS04345 SM00354 helix_turn _helix lactose operon repressor CDW54_RS04355 SM00858 CDW54_RS04355 CDW54_RS04375 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04400 SM00872 Alpha mannosidase, middle domain CDW54_RS04405 SM01149 CDW54_RS04405 CDW54_RS04410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS04425 SM00342 helix_turn_helix, arabinose operon control protein CDW54_RS04425 SM00448 cheY-homologous receiver domain CDW54_RS04430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDW54_RS04460 SM00363 S4 RNA-binding domain CDW54_RS04535 SM00422 helix_turn_helix, mercury resistance CDW54_RS04545 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04565 SM00047 Lysozyme subfamily 2 CDW54_RS04565 SM00257 Lysin motif CDW54_RS04570 SM00014 Acid phosphatase homologues CDW54_RS04575 SM00729 Elongator protein 3, MiaB family, Radical SAM CDW54_RS04585 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04590 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04785 SM00382 ATPases associated with a variety of cellular activities CDW54_RS04795 SM00977 TilS substrate C-terminal domain CDW54_RS04800 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS04810 SM00363 S4 RNA-binding domain CDW54_RS04820 SM00487 DEAD-like helicases superfamily CDW54_RS04820 SM00490 helicase superfamily c-terminal domain CDW54_RS04820 SM00982 CDW54_RS04820 CDW54_RS04820 SM01058 CarD-like/TRCF domain CDW54_RS04870 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CDW54_RS04885 SM00220 Serine/Threonine protein kinases, catalytic domain CDW54_RS04885 SM00740 CDW54_RS04885 CDW54_RS04890 SM00331 Sigma factor PP2C-like phosphatases CDW54_RS04890 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CDW54_RS04910 SM00487 DEAD-like helicases superfamily CDW54_RS04910 SM00490 helicase superfamily c-terminal domain CDW54_RS04915 SM01409 CDW54_RS04915 CDW54_RS04920 SM00072 Guanylate kinase homologues. CDW54_RS04965 SM01400 CDW54_RS04965 CDW54_RS04985 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05010 SM00322 K homology RNA-binding domain CDW54_RS05010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS05015 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05020 SM00852 Probable molybdopterin binding domain CDW54_RS05075 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDW54_RS05080 SM00535 Ribonuclease III family CDW54_RS05085 SM00840 CDW54_RS05085 CDW54_RS05100 SM00670 Large family of predicted nucleotide-binding domains CDW54_RS05105 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05160 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05175 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS05185 SM00829 Enoylreductase CDW54_RS05215 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05225 SM00534 ATPase domain of DNA mismatch repair MUTS family CDW54_RS05230 SM00387 Histidine kinase-like ATPases CDW54_RS05230 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS05235 SM00448 cheY-homologous receiver domain CDW54_RS05235 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS05245 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05330 SM00642 Alpha-amylase domain CDW54_RS05340 SM00354 helix_turn _helix lactose operon repressor CDW54_RS05345 SM00663 RNA polymerase I subunit A N-terminus CDW54_RS05370 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05415 SM00900 CDW54_RS05415 CDW54_RS05450 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05450 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS05530 SM00448 cheY-homologous receiver domain CDW54_RS05530 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS05535 SM00387 Histidine kinase-like ATPases CDW54_RS05535 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS05550 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS05550 SM01240 CDW54_RS05550 CDW54_RS05570 SM00470 ParB-like nuclease domain CDW54_RS05605 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS05610 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS05630 SM01228 CDW54_RS05630 CDW54_RS05645 SM00322 K homology RNA-binding domain CDW54_RS05645 SM00393 Putative single-stranded nucleic acids-binding domain CDW54_RS05645 SM01245 CDW54_RS05645 CDW54_RS05670 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05670 SM00760 Bacterial dnaA protein helix-turn-helix domain CDW54_RS05675 SM00480 DNA polymerase III beta subunit CDW54_RS05690 SM00387 Histidine kinase-like ATPases CDW54_RS05690 SM00433 TopoisomeraseII CDW54_RS05695 SM00434 DNA Topoisomerase IV CDW54_RS05715 SM00267 diguanylate cyclase CDW54_RS05730 SM00788 Adenylosuccinate synthetase CDW54_RS05745 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05820 SM00354 helix_turn _helix lactose operon repressor CDW54_RS05825 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CDW54_RS05830 SM01133 CDW54_RS05830 CDW54_RS05845 SM00382 ATPases associated with a variety of cellular activities CDW54_RS05880 SM00855 Phosphoglycerate mutase family CDW54_RS05885 SM00857 Resolvase, N terminal domain CDW54_RS05905 SM00838 Elongation factor G C-terminus CDW54_RS05905 SM00889 Elongation factor G, domain IV CDW54_RS05915 SM01403 CDW54_RS05915 CDW54_RS05935 SM01382 CDW54_RS05935 CDW54_RS05935 SM01383 CDW54_RS05935 CDW54_RS05950 SM00322 K homology RNA-binding domain CDW54_RS05970 SM01374 CDW54_RS05970 CDW54_RS05975 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDW54_RS06030 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS06050 SM00662 RNA polymerases D CDW54_RS06060 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06065 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06090 SM00849 Metallo-beta-lactamase superfamily CDW54_RS06100 SM00344 helix_turn_helix ASNC type CDW54_RS06145 SM01120 CDW54_RS06145 CDW54_RS06145 SM01121 CDW54_RS06145 CDW54_RS06150 SM00487 DEAD-like helicases superfamily CDW54_RS06150 SM00490 helicase superfamily c-terminal domain CDW54_RS06165 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06170 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06195 SM00358 Double-stranded RNA binding motif CDW54_RS06195 SM00535 Ribonuclease III family CDW54_RS06200 SM00968 SMC proteins Flexible Hinge Domain CDW54_RS06210 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06210 SM00962 SRP54-type protein, GTPase domain CDW54_RS06210 SM00963 SRP54-type protein, helical bundle domain CDW54_RS06235 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06330 SM00363 S4 RNA-binding domain CDW54_RS06330 SM01390 CDW54_RS06330 CDW54_RS06365 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDW54_RS06365 SM00534 ATPase domain of DNA mismatch repair MUTS family CDW54_RS06370 SM00853 MutL C terminal dimerisation domain CDW54_RS06370 SM01340 CDW54_RS06370 CDW54_RS06385 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS06385 SM00866 CDW54_RS06385 CDW54_RS06395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDW54_RS06400 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06410 SM00226 Low molecular weight phosphatase family CDW54_RS06435 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06440 SM00062 Bacterial periplasmic substrate-binding proteins CDW54_RS06460 SM00830 Chorismate mutase type II CDW54_RS06460 SM01266 CDW54_RS06460 CDW54_RS06480 SM01387 CDW54_RS06480 CDW54_RS06485 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS06485 SM00322 K homology RNA-binding domain CDW54_RS06500 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS06500 SM01091 Transporter associated domain CDW54_RS06575 SM00487 DEAD-like helicases superfamily CDW54_RS06575 SM00490 helicase superfamily c-terminal domain CDW54_RS06585 SM01005 Alanine racemase, C-terminal domain CDW54_RS06605 SM00829 Enoylreductase CDW54_RS06660 SM00116 Domain in cystathionine beta-synthase and other proteins. CDW54_RS06660 SM00382 ATPases associated with a variety of cellular activities CDW54_RS06670 SM00831 Cation transporter/ATPase, N-terminus CDW54_RS06685 SM01323 CDW54_RS06685 CDW54_RS06790 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS06790 SM00895 CDW54_RS06790 CDW54_RS06840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDW54_RS07075 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS07075 SM00895 CDW54_RS07075 CDW54_RS07180 SM00831 Cation transporter/ATPase, N-terminus CDW54_RS07210 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDW54_RS07295 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS07305 SM00873 B3/4 domain CDW54_RS07325 SM00642 Alpha-amylase domain CDW54_RS07360 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS07400 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDW54_RS07400 SM00534 ATPase domain of DNA mismatch repair MUTS family CDW54_RS07425 SM00450 Rhodanese Homology Domain CDW54_RS07430 SM00450 Rhodanese Homology Domain CDW54_RS07480 SM01120 CDW54_RS07480 CDW54_RS07495 SM00100 Cyclic nucleotide-monophosphate binding domain CDW54_RS07495 SM00419 helix_turn_helix, cAMP Regulatory protein CDW54_RS07505 SM00382 ATPases associated with a variety of cellular activities CDW54_RS07520 SM00363 S4 RNA-binding domain CDW54_RS07540 SM00354 helix_turn _helix lactose operon repressor CDW54_RS07600 SM00422 helix_turn_helix, mercury resistance CDW54_RS07650 SM00382 ATPases associated with a variety of cellular activities CDW54_RS07655 SM00448 cheY-homologous receiver domain CDW54_RS07655 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS07660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDW54_RS07660 SM00387 Histidine kinase-like ATPases CDW54_RS07660 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS07695 SM00244 prohibitin homologues CDW54_RS07705 SM00382 ATPases associated with a variety of cellular activities CDW54_RS07720 SM00047 Lysozyme subfamily 2 CDW54_RS07750 SM00354 helix_turn _helix lactose operon repressor CDW54_RS07760 SM00382 ATPases associated with a variety of cellular activities CDW54_RS07770 SM00642 Alpha-amylase domain CDW54_RS07790 SM00448 cheY-homologous receiver domain CDW54_RS07790 SM00850 LytTr DNA-binding domain CDW54_RS07800 SM00793 Accessory gene regulator B CDW54_RS07895 SM00841 Elongation factor P, C-terminal CDW54_RS07895 SM01185 CDW54_RS07895 CDW54_RS07910 SM01130 CDW54_RS07910 CDW54_RS07925 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDW54_RS07985 SM00342 helix_turn_helix, arabinose operon control protein CDW54_RS08005 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08025 SM00567 E-Z type HEAT repeats CDW54_RS08030 SM00257 Lysin motif CDW54_RS08140 SM00448 cheY-homologous receiver domain CDW54_RS08140 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS08145 SM00387 Histidine kinase-like ATPases CDW54_RS08190 SM00710 Parallel beta-helix repeats CDW54_RS08210 SM01400 CDW54_RS08210 CDW54_RS08265 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDW54_RS08265 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDW54_RS08265 SM00493 CDW54_RS08265 CDW54_RS08320 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08320 SM00930 CDW54_RS08320 CDW54_RS08335 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08365 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08370 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08390 SM00942 Primase C terminal 1 (PriCT-1) CDW54_RS08510 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08540 SM00327 von Willebrand factor (vWF) type A domain CDW54_RS08600 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08605 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08605 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS08635 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDW54_RS08635 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDW54_RS08655 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08690 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08715 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDW54_RS08740 SM00448 cheY-homologous receiver domain CDW54_RS08740 SM00850 LytTr DNA-binding domain CDW54_RS08780 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS08780 SM00866 CDW54_RS08780 CDW54_RS08825 SM00354 helix_turn _helix lactose operon repressor CDW54_RS08845 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS08850 SM00562 CDW54_RS08850 CDW54_RS08855 SM00831 Cation transporter/ATPase, N-terminus CDW54_RS08870 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08870 SM00930 CDW54_RS08870 CDW54_RS08925 SM00382 ATPases associated with a variety of cellular activities CDW54_RS08930 SM00855 Phosphoglycerate mutase family CDW54_RS08965 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09050 SM00986 Uracil DNA glycosylase superfamily CDW54_RS09050 SM00987 UreE urease accessory protein, C-terminal domain CDW54_RS09075 SM00479 CDW54_RS09075 CDW54_RS09135 SM00829 Enoylreductase CDW54_RS09160 SM00829 Enoylreductase CDW54_RS09165 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS09170 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09210 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09215 SM00881 CoA binding domain CDW54_RS09235 SM00850 LytTr DNA-binding domain CDW54_RS09265 SM00732 Likely ribonuclease with RNase H fold. CDW54_RS09290 SM00919 Malic enzyme, NAD binding domain CDW54_RS09290 SM01274 CDW54_RS09290 CDW54_RS09345 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09360 SM00646 CDW54_RS09360 CDW54_RS09385 SM00463 Small MutS-related domain CDW54_RS09385 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDW54_RS09385 SM00534 ATPase domain of DNA mismatch repair MUTS family CDW54_RS09395 SM00465 GIY-YIG type nucleases (URI domain) CDW54_RS09400 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09480 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS09510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS09565 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDW54_RS09580 SM01192 CDW54_RS09580 CDW54_RS09580 SM01193 CDW54_RS09580 CDW54_RS09620 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS09620 SM00955 CDW54_RS09620 CDW54_RS09660 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09685 SM01234 CDW54_RS09685 CDW54_RS09715 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS09715 SM00866 CDW54_RS09715 CDW54_RS09735 SM00487 DEAD-like helicases superfamily CDW54_RS09735 SM00490 helicase superfamily c-terminal domain CDW54_RS09750 SM00957 SecA DEAD-like domain CDW54_RS09750 SM00958 SecA preprotein cross-linking domain CDW54_RS09760 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09770 SM00155 Phospholipase D. Active site motifs. CDW54_RS09790 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09795 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09875 SM00354 helix_turn _helix lactose operon repressor CDW54_RS09890 SM00518 AP endonuclease family 2 CDW54_RS09910 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09915 SM00382 ATPases associated with a variety of cellular activities CDW54_RS09920 SM01061 CAT RNA binding domain CDW54_RS09960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDW54_RS09990 SM00322 K homology RNA-binding domain CDW54_RS09995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS10080 SM00984 UDP binding domain CDW54_RS10140 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDW54_RS10145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS10170 SM00936 Penicillin-binding protein 5, C-terminal domain CDW54_RS10185 SM00357 Cold shock protein domain CDW54_RS10190 SM00479 CDW54_RS10190 CDW54_RS10190 SM00491 CDW54_RS10190 CDW54_RS10355 SM00387 Histidine kinase-like ATPases CDW54_RS10355 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS10360 SM00448 cheY-homologous receiver domain CDW54_RS10360 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS10375 SM00382 ATPases associated with a variety of cellular activities CDW54_RS10375 SM00962 SRP54-type protein, GTPase domain CDW54_RS10375 SM00963 SRP54-type protein, helical bundle domain CDW54_RS10535 SM00448 cheY-homologous receiver domain CDW54_RS10535 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS10540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDW54_RS10540 SM00387 Histidine kinase-like ATPases CDW54_RS10540 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS10585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDW54_RS10685 SM00382 ATPases associated with a variety of cellular activities CDW54_RS10720 SM00450 Rhodanese Homology Domain CDW54_RS10750 SM00354 helix_turn _helix lactose operon repressor CDW54_RS10795 SM00836 DALR anticodon binding domain CDW54_RS10795 SM01016 Arginyl tRNA synthetase N terminal dom CDW54_RS10850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDW54_RS10860 SM00479 CDW54_RS10860 CDW54_RS10860 SM00481 DNA polymerase alpha chain like domain CDW54_RS10870 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS10870 SM00322 K homology RNA-binding domain CDW54_RS10910 SM00904 Riboflavin kinase CDW54_RS10915 SM00822 CDW54_RS10915 CDW54_RS10960 SM00507 HNH nucleases CDW54_RS10975 SM00729 Elongator protein 3, MiaB family, Radical SAM CDW54_RS10995 SM00271 DnaJ molecular chaperone homology domain CDW54_RS11000 SM00382 ATPases associated with a variety of cellular activities CDW54_RS11005 SM00062 Bacterial periplasmic substrate-binding proteins CDW54_RS11010 SM00487 DEAD-like helicases superfamily CDW54_RS11010 SM00490 helicase superfamily c-terminal domain CDW54_RS11015 SM00382 ATPases associated with a variety of cellular activities CDW54_RS11065 SM00890 Domain of unknown function CDW54_RS11100 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS11140 SM00382 ATPases associated with a variety of cellular activities CDW54_RS11140 SM00994 ClpX C4-type zinc finger CDW54_RS11140 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS11160 SM00420 helix_turn_helix, Deoxyribose operon repressor CDW54_RS11160 SM01134 CDW54_RS11160 CDW54_RS11185 SM00292 breast cancer carboxy-terminal domain CDW54_RS11185 SM00532 Ligase N family CDW54_RS11200 SM00845 GatB domain CDW54_RS11205 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDW54_RS11245 SM00354 helix_turn _helix lactose operon repressor CDW54_RS11260 SM01038 Beta galactosidase small chain CDW54_RS11310 SM00342 helix_turn_helix, arabinose operon control protein CDW54_RS11310 SM00448 cheY-homologous receiver domain CDW54_RS11340 SM00938 Nitrogen regulatory protein P-II CDW54_RS11355 SM00855 Phosphoglycerate mutase family CDW54_RS11380 SM00450 Rhodanese Homology Domain CDW54_RS11390 SM00316 Ribosomal protein S1-like RNA-binding domain CDW54_RS11390 SM00732 Likely ribonuclease with RNase H fold. CDW54_RS11395 SM00731 SprT homologues. CDW54_RS11420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CDW54_RS11420 SM00474 3'-5' exonuclease CDW54_RS11420 SM00475 5'-3' exonuclease CDW54_RS11420 SM00482 DNA polymerase A domain CDW54_RS11425 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CDW54_RS11425 SM01232 CDW54_RS11425 CDW54_RS11475 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDW54_RS11495 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS11510 SM00382 ATPases associated with a variety of cellular activities CDW54_RS11510 SM01086 C-terminal, D2-small domain, of ClpB protein CDW54_RS11530 SM00838 Elongation factor G C-terminus CDW54_RS11565 SM00357 Cold shock protein domain CDW54_RS11570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDW54_RS11720 SM00357 Cold shock protein domain CDW54_RS11815 SM00530 Helix-turn-helix XRE-family like proteins CDW54_RS11870 SM00861 Transketolase, pyrimidine binding domain CDW54_RS11875 SM01022 CDW54_RS11875 CDW54_RS11885 SM00903 Flavin reductase like domain CDW54_RS11935 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDW54_RS11935 SM00895 CDW54_RS11935 CDW54_RS11965 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS11985 SM00642 Alpha-amylase domain CDW54_RS12030 SM00062 Bacterial periplasmic substrate-binding proteins CDW54_RS12055 SM00072 Guanylate kinase homologues. CDW54_RS12130 SM00327 von Willebrand factor (vWF) type A domain CDW54_RS12135 SM00642 Alpha-amylase domain CDW54_RS12175 SM00387 Histidine kinase-like ATPases CDW54_RS12175 SM00388 His Kinase A (phosphoacceptor) domain CDW54_RS12180 SM00448 cheY-homologous receiver domain CDW54_RS12180 SM00862 Transcriptional regulatory protein, C terminal CDW54_RS12190 SM00382 ATPases associated with a variety of cellular activities CDW54_RS12255 SM00342 helix_turn_helix, arabinose operon control protein CDW54_RS12280 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDW54_RS12280 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDW54_RS12280 SM00493 CDW54_RS12280 CDW54_RS12300 SM00382 ATPases associated with a variety of cellular activities CDW54_RS12335 SM01057 Eukaryotic-type carbonic anhydrase CDW54_RS12355 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDW54_RS12370 SM00851 MGS-like domain CDW54_RS12370 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDW54_RS12370 SM01209 CDW54_RS12370 CDW54_RS12375 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CDW54_RS12400 SM00363 S4 RNA-binding domain CDW54_RS12425 SM00357 Cold shock protein domain CDW54_RS12450 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDW54_RS12465 SM00487 DEAD-like helicases superfamily CDW54_RS12465 SM00490 helicase superfamily c-terminal domain CDW54_RS12505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDW54_RS12515 SM00981 CDW54_RS12515 CDW54_RS12550 SM00478 endonuclease III CDW54_RS12550 SM00525 CDW54_RS12550 CDW54_RS12565 SM00347 helix_turn_helix multiple antibiotic resistance protein CDW54_RS12590 SM00047 Lysozyme subfamily 2 CDW54_RS12590 SM00257 Lysin motif CDW54_RS12595 SM00861 Transketolase, pyrimidine binding domain CDW54_RS12695 SM00116 Domain in cystathionine beta-synthase and other proteins.