locus-tag	class	description
CI789_RS00010	COG3091	SprT-like family
CI789_RS00015	COG2814	Major facilitator Superfamily
CI789_RS00020	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CI789_RS00030	COG1166	arginine decarboxylase activity
CI789_RS00040	COG0501	Belongs to the peptidase M48B family
CI789_RS00045	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CI789_RS00050	COG3119	arylsulfatase activity
CI789_RS00055	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CI789_RS00060	COG0126	phosphoglycerate kinase activity
CI789_RS00065	COG0191	fructose-bisphosphate aldolase activity
CI789_RS00070	COG0668	transmembrane transport
CI789_RS00075	COG1279	arginine transmembrane transporter activity
CI789_RS00085	COG0583	DNA-binding transcription factor activity
CI789_RS00090	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CI789_RS00095	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CI789_RS00110	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CI789_RS00115	COG3079	Belongs to the UPF0149 family
CI789_RS00120	COG0006	proline dipeptidase activity
CI789_RS00125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CI789_RS00130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CI789_RS00135	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CI789_RS00140	COG0509	glycine decarboxylation via glycine cleavage system
CI789_RS00145	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CI789_RS00145	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CI789_RS00150	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS00160	COG1272	protein, Hemolysin III
CI789_RS00165	COG0354	folic acid binding
CI789_RS00180	COG0745	RESPONSE REGULATOR receiver
CI789_RS00185	COG2205	protein histidine kinase activity
CI789_RS00190	COG4452	Inner membrane protein CreD
CI789_RS00200	COG4974	Belongs to the 'phage' integrase family
CI789_RS00205	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CI789_RS00210	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CI789_RS00220	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CI789_RS00225	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CI789_RS00240	COG2814	Major facilitator Superfamily
CI789_RS00245	COG0583	DNA-binding transcription factor activity
CI789_RS00255	COG1447	Phosphotransferase system cellobiose-specific component IIA
CI789_RS00260	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CI789_RS00265	COG2723	6-phospho-beta-galactosidase activity
CI789_RS00270	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CI789_RS00275	COG2186	Transcriptional regulator
CI789_RS00285	COG1609	Transcriptional regulator
CI789_RS00295	COG0768	penicillin binding
CI789_RS00320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CI789_RS00325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CI789_RS00340	COG0318	PFAM AMP-dependent synthetase and ligase
CI789_RS00340	COG0204	Acyl-transferase
CI789_RS00350	COG0667	Aldo Keto reductase
CI789_RS00360	COG0861	Integral membrane protein TerC family
CI789_RS00365	COG3066	DNA modification
CI789_RS00380	COG1051	belongs to the nudix hydrolase family
CI789_RS00390	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CI789_RS00395	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CI789_RS00405	COG4795	General secretion pathway protein
CI789_RS00420	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CI789_RS00430	COG1074	ATP-dependent DNA helicase activity
CI789_RS00435	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CI789_RS00440	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CI789_RS00440	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CI789_RS00445	COG0860	N-Acetylmuramoyl-L-alanine amidase
CI789_RS00465	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CI789_RS00470	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CI789_RS00475	COG2166	iron-sulfur cluster assembly
CI789_RS00480	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CI789_RS00490	COG0583	DNA-binding transcription factor activity
CI789_RS00495	COG2363	Small membrane protein
CI789_RS00500	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
CI789_RS00505	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CI789_RS00510	COG1611	Belongs to the LOG family
CI789_RS00515	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CI789_RS00515	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CI789_RS00525	COG3098	single-species biofilm formation
CI789_RS00530	COG0564	pseudouridine synthase activity
CI789_RS00535	COG0716	FMN binding
CI789_RS00545	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CI789_RS00550	COG3956	TIGRFAM MazG family protein
CI789_RS00555	COG0504	CTP synthase activity
CI789_RS00560	COG0148	phosphopyruvate hydratase activity
CI789_RS00575	COG0602	queuosine metabolic process
CI789_RS00585	COG0583	DNA-binding transcription factor activity
CI789_RS00590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS00595	COG1126	abc transporter atp-binding protein
CI789_RS00600	COG0765	amino acid transport
CI789_RS00605	COG0720	synthase
CI789_RS00615	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CI789_RS00620	COG0175	sulfate reduction
CI789_RS00635	COG2234	aminopeptidase activity
CI789_RS00640	COG1648	precorrin-2 dehydrogenase activity
CI789_RS00640	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CI789_RS00645	COG0175	sulfate reduction
CI789_RS00650	COG2895	sulfate adenylyltransferase (ATP) activity
CI789_RS00655	COG0529	Catalyzes the synthesis of activated sulfate
CI789_RS00665	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CI789_RS00670	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CI789_RS00675	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CI789_RS00680	COG0585	pseudouridine synthase activity
CI789_RS00685	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CI789_RS00690	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS00725	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CI789_RS00730	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CI789_RS00740	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CI789_RS00745	COG2197	response regulator
CI789_RS00750	COG2223	nitrite transmembrane transporter activity
CI789_RS00755	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CI789_RS00760	COG1140	nitrate reductase beta subunit
CI789_RS00765	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CI789_RS00770	COG2181	nitrate reductase activity
CI789_RS00775	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CI789_RS00810	COG5455	response to cobalt ion
CI789_RS00815	COG2951	lytic endotransglycosylase activity
CI789_RS00825	COG1546	Belongs to the CinA family
CI789_RS00830	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CI789_RS00845	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CI789_RS00880	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CI789_RS00885	COG1238	metal cluster binding
CI789_RS00890	COG2918	glutathione biosynthetic process
CI789_RS00895	COG1854	S-ribosylhomocysteine lyase activity
CI789_RS00900	COG4536	flavin adenine dinucleotide binding
CI789_RS00905	COG4137	Cytochrome C assembly protein
CI789_RS00910	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CI789_RS00915	COG0228	four-way junction DNA binding
CI789_RS00930	COG0335	large ribosomal subunit rRNA binding
CI789_RS00935	COG0697	spore germination
CI789_RS00945	COG2199	diguanylate cyclase activity
CI789_RS00950	COG2885	chlorophyll binding
CI789_RS00955	COG0504	CTP synthase activity
CI789_RS00970	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CI789_RS00975	COG1605	Chorismate mutase
CI789_RS00975	COG0287	Prephenate dehydrogenase
CI789_RS00985	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS00990	COG1605	Chorismate mutase
CI789_RS00990	COG0077	Prephenate dehydratase
CI789_RS00995	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CI789_RS01000	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS01010	COG0564	pseudouridine synthase activity
CI789_RS01020	COG0542	response to heat
CI789_RS01045	COG0477	Major facilitator Superfamily
CI789_RS01050	COG5544	Lipoprotein
CI789_RS01055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CI789_RS01060	COG1042	CoA-binding domain protein
CI789_RS01060	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CI789_RS01060	COG0045	succinate-CoA ligase (ADP-forming) activity
CI789_RS01065	COG3148	PFAM DTW domain containing protein
CI789_RS01070	COG3118	belongs to the thioredoxin family
CI789_RS01075	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CI789_RS01085	COG1566	PFAM secretion protein HlyD family protein
CI789_RS01100	COG2814	Major facilitator Superfamily
CI789_RS01110	COG4176	ABC-type proline glycine betaine transport system permease component
CI789_RS01120	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CI789_RS01125	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CI789_RS01130	COG1780	Probably involved in ribonucleotide reductase function
CI789_RS01135	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CI789_RS01140	COG4575	ribosome binding
CI789_RS01150	COG0833	amino acid
CI789_RS01160	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CI789_RS01215	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CI789_RS01220	COG2867	negative regulation of translational initiation
CI789_RS01225	COG2914	Belongs to the UPF0125 (RnfH) family
CI789_RS01230	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS01235	COG0497	DNA recombination
CI789_RS01240	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CI789_RS01245	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CI789_RS01250	COG0840	transmembrane signaling receptor activity
CI789_RS01255	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CI789_RS01260	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
CI789_RS01265	COG0513	Belongs to the DEAD box helicase family
CI789_RS01270	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CI789_RS01275	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CI789_RS01290	COG3026	antisigma factor binding
CI789_RS01295	COG3086	response to oxidative stress
CI789_RS01300	COG0481	GTPase activity
CI789_RS01310	COG0571	ribonuclease III activity
CI789_RS01320	COG1381	Involved in DNA repair and RecF pathway recombination
CI789_RS01325	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CI789_RS01330	COG0736	holo-[acyl-carrier-protein] synthase activity
CI789_RS01335	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CI789_RS01345	COG0463	Glycosyl transferase, family 2
CI789_RS01350	COG2246	polysaccharide biosynthetic process
CI789_RS01355	COG1737	Transcriptional regulator
CI789_RS01360	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CI789_RS01365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS01365	COG1263	PTS System
CI789_RS01370	COG0560	Phosphoserine phosphatase
CI789_RS01380	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CI789_RS01385	COG0047	phosphoribosylformylglycinamidine synthase activity
CI789_RS01385	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CI789_RS01390	COG2205	protein histidine kinase activity
CI789_RS01395	COG3170	Tfp pilus assembly protein FimV
CI789_RS01400	COG2204	response regulator
CI789_RS01405	COG0347	Belongs to the P(II) protein family
CI789_RS01425	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CI789_RS01430	COG2814	Major facilitator Superfamily
CI789_RS01435	COG3711	transcriptional antiterminator
CI789_RS01440	COG3683	transport system, periplasmic component
CI789_RS01450	COG0483	inositol monophosphate 1-phosphatase activity
CI789_RS01460	COG1959	2 iron, 2 sulfur cluster binding
CI789_RS01465	COG1104	cysteine desulfurase activity
CI789_RS01470	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CI789_RS01480	COG2897	thiosulfate sulfurtransferase activity
CI789_RS01485	COG2373	Large extracellular alpha-helical protein
CI789_RS01490	COG4953	penicillin-binding protein 1C
CI789_RS01495	COG0105	UTP biosynthetic process
CI789_RS01500	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CI789_RS01510	COG1426	Protein conserved in bacteria
CI789_RS01515	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CI789_RS01520	COG0124	histidyl-tRNA synthetase
CI789_RS01525	COG2976	Protein conserved in bacteria
CI789_RS01530	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS01535	COG1160	GTP binding
CI789_RS01540	COG1645	bacterial-type flagellum-dependent swarming motility
CI789_RS01545	COG4993	Dehydrogenase
CI789_RS01555	COG1570	exodeoxyribonuclease VII activity
CI789_RS01560	COG0516	GMP reductase activity
CI789_RS01560	COG0517	IMP dehydrogenase activity
CI789_RS01595	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS01600	COG2271	Major facilitator Superfamily
CI789_RS01605	COG2239	Acts as a magnesium transporter
CI789_RS01615	COG2200	EAL domain
CI789_RS01620	COG0500	methyltransferase
CI789_RS01630	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CI789_RS01635	COG0573	inorganic phosphate transmembrane transporter activity
CI789_RS01645	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CI789_RS01675	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CI789_RS01680	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CI789_RS01690	COG2233	PERMEase
CI789_RS01700	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CI789_RS01705	COG1393	Belongs to the ArsC family
CI789_RS01710	COG4783	chaperone-mediated protein folding
CI789_RS01725	COG0628	permease
CI789_RS01730	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CI789_RS01735	COG2716	regulation of RNA biosynthetic process
CI789_RS01740	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CI789_RS01745	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CI789_RS01750	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CI789_RS01755	COG2321	neutral zinc metallopeptidase
CI789_RS01760	COG1444	tRNA N-acetyltransferase activity
CI789_RS01765	COG0400	carboxylic ester hydrolase activity
CI789_RS01775	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CI789_RS01780	COG1393	Belongs to the ArsC family
CI789_RS01795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CI789_RS01800	COG2197	response regulator
CI789_RS01805	COG3850	Histidine kinase
CI789_RS01820	COG0494	nUDIX hydrolase
CI789_RS01830	COG1940	carbohydrate kinase activity
CI789_RS01835	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CI789_RS01845	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS01850	COG1129	ABC transporter
CI789_RS01860	COG1349	DNA-binding transcription factor activity
CI789_RS01865	COG5342	invasion associated locus B
CI789_RS01875	COG0745	RESPONSE REGULATOR receiver
CI789_RS01880	COG5002	protein histidine kinase activity
CI789_RS01895	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CI789_RS01900	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CI789_RS01905	COG0698	ribose 5-phosphate isomerase
CI789_RS01915	COG2376	Dihydroxyacetone kinase
CI789_RS01920	COG0149	triose-phosphate isomerase activity
CI789_RS01925	COG1082	Xylose isomerase domain protein TIM barrel
CI789_RS01930	COG2084	Dehydrogenase
CI789_RS01945	COG0408	coproporphyrinogen oxidase activity
CI789_RS01950	COG0860	N-Acetylmuramoyl-L-alanine amidase
CI789_RS01955	COG0456	acetyltransferase
CI789_RS01970	COG2837	iron assimilation
CI789_RS01980	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CI789_RS01985	COG4208	sulfate ABC transporter
CI789_RS01995	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CI789_RS02000	COG0745	RESPONSE REGULATOR receiver
CI789_RS02005	COG2205	protein histidine kinase activity
CI789_RS02020	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CI789_RS02045	COG3115	cell septum assembly
CI789_RS02050	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CI789_RS02055	COG3530	Putative quorum-sensing-regulated virulence factor
CI789_RS02060	COG0385	Bile acid
CI789_RS02065	COG0583	DNA-binding transcription factor activity
CI789_RS02075	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS02105	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CI789_RS02110	COG3415	Transposase
CI789_RS02115	COG2116	formate transmembrane transporter activity
CI789_RS02130	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CI789_RS02135	COG1914	H( )-stimulated, divalent metal cation uptake system
CI789_RS02145	COG0667	Aldo Keto reductase
CI789_RS02150	COG3961	Belongs to the TPP enzyme family
CI789_RS02155	COG0837	glucose binding
CI789_RS02160	COG3279	Response regulator of the LytR AlgR family
CI789_RS02165	COG3275	phosphorelay sensor kinase activity
CI789_RS02175	COG0154	amidase activity
CI789_RS02200	COG1396	sequence-specific DNA binding
CI789_RS02220	COG0640	Transcriptional regulator
CI789_RS02260	COG1280	lysine exporter protein (LysE YggA)
CI789_RS02270	COG2207	Transcriptional regulator
CI789_RS02275	COG0640	Transcriptional regulator
CI789_RS02280	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CI789_RS02305	COG3734	2-keto-3-deoxy-galactonokinase
CI789_RS02315	COG4948	Mandelate Racemase Muconate Lactonizing
CI789_RS02335	COG0583	DNA-binding transcription factor activity
CI789_RS02340	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CI789_RS02375	COG0436	Aminotransferase
CI789_RS02415	COG2223	nitrite transmembrane transporter activity
CI789_RS02430	COG0668	transmembrane transport
CI789_RS02435	COG0840	transmembrane signaling receptor activity
CI789_RS02470	COG2885	chlorophyll binding
CI789_RS02670	COG1484	DNA-dependent DNA replication
CI789_RS02765	COG3772	lysozyme
CI789_RS02905	COG0463	Glycosyl transferase, family 2
CI789_RS02910	COG2246	polysaccharide biosynthetic process
CI789_RS02920	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CI789_RS02925	COG0582	viral genome integration into host DNA
CI789_RS02935	COG2116	formate transmembrane transporter activity
CI789_RS02945	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CI789_RS02950	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CI789_RS02955	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CI789_RS02960	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CI789_RS02965	COG1138	Cytochrome C-type biogenesis protein
CI789_RS02975	COG3088	subunit of a heme lyase
CI789_RS02975	COG4235	cytochrome complex assembly
CI789_RS02980	COG3088	subunit of a heme lyase
CI789_RS02980	COG4235	cytochrome complex assembly
CI789_RS02990	COG2067	long-chain fatty acid transport protein
CI789_RS02995	COG3691	Protein conserved in bacteria
CI789_RS03000	COG0183	Belongs to the thiolase family
CI789_RS03005	COG1250	3-hydroxyacyl-CoA dehydrogenase
CI789_RS03005	COG1024	Enoyl-CoA hydratase
CI789_RS03010	COG2062	phosphohistidine phosphatase, SixA
CI789_RS03015	COG2840	Smr protein MutS2
CI789_RS03025	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CI789_RS03035	COG0730	response to heat
CI789_RS03050	COG4977	sequence-specific DNA binding
CI789_RS03055	COG5001	Diguanylate cyclase
CI789_RS03055	COG3300	MHYT domain
CI789_RS03060	COG3101	peptidyl-lysine hydroxylation
CI789_RS03080	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CI789_RS03080	COG2010	Cytochrome c
CI789_RS03085	COG2010	Cytochrome c
CI789_RS03085	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CI789_RS03090	COG2080	2 iron, 2 sulfur cluster binding
CI789_RS03100	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CI789_RS03105	COG2315	Protein conserved in bacteria
CI789_RS03110	COG5645	(Lipo)protein
CI789_RS03130	COG0517	IMP dehydrogenase activity
CI789_RS03130	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CI789_RS03140	COG4211	Belongs to the binding-protein-dependent transport system permease family
CI789_RS03145	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS03150	COG1129	ABC transporter
CI789_RS03180	COG2814	Major facilitator Superfamily
CI789_RS03230	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CI789_RS03240	COG0586	Pfam SNARE associated Golgi protein
CI789_RS03250	COG0285	dihydrofolate synthase activity
CI789_RS03255	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CI789_RS03265	COG1286	toxin biosynthetic process
CI789_RS03270	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CI789_RS03275	COG0163	prenyltransferase activity
CI789_RS03290	COG4160	amino acid transport
CI789_RS03295	COG4598	ABC transporter
CI789_RS03300	COG1090	epimerase
CI789_RS03305	COG0625	glutathione transferase activity
CI789_RS03315	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CI789_RS03320	COG0280	phosphate acetyltransferase
CI789_RS03320	COG0857	belongs to the CobB CobQ family
CI789_RS03325	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CI789_RS03330	COG3092	negative regulation of chromosome organization
CI789_RS03340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CI789_RS03345	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
CI789_RS03350	COG0436	Aminotransferase
CI789_RS03355	COG0583	DNA-binding transcription factor activity
CI789_RS03365	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CI789_RS03370	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CI789_RS03375	COG0649	NAD binding
CI789_RS03375	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CI789_RS03385	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CI789_RS03395	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CI789_RS03400	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CI789_RS03405	COG0839	Belongs to the complex I subunit 6 family
CI789_RS03410	COG0713	ATP synthesis coupled electron transport
CI789_RS03415	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CI789_RS03420	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CI789_RS03425	COG1007	ATP synthesis coupled electron transport
CI789_RS03430	COG2153	protein acetylation
CI789_RS03440	COG4575	ribosome binding
CI789_RS03445	COG1169	isochorismate synthase
CI789_RS03450	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
CI789_RS03455	COG0596	Alpha beta hydrolase
CI789_RS03470	COG0318	PFAM AMP-dependent synthetase and ligase
CI789_RS03480	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CI789_RS03485	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CI789_RS03490	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CI789_RS03495	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CI789_RS03515	COG0784	Response regulator, receiver
CI789_RS03515	COG2205	protein histidine kinase activity
CI789_RS03520	COG2197	response regulator
CI789_RS03525	COG2198	Histidine kinase
CI789_RS03525	COG0642	Histidine kinase
CI789_RS03530	COG2223	nitrite transmembrane transporter activity
CI789_RS03550	COG1132	(ABC) transporter
CI789_RS03555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CI789_RS03575	COG4615	Cyclic peptide transporter
CI789_RS03580	COG1126	abc transporter atp-binding protein
CI789_RS03595	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CI789_RS03600	COG1473	amidohydrolase
CI789_RS03605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS03610	COG2977	Belongs to the P-Pant transferase superfamily
CI789_RS03640	COG3083	sulfuric ester hydrolase activity
CI789_RS03645	COG3082	Protein of unknown function (DUF1414)
CI789_RS03650	COG3081	Nucleoid-associated protein
CI789_RS03655	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CI789_RS03660	COG1061	Type III restriction enzyme res subunit
CI789_RS03665	COG1187	pseudouridine synthase activity
CI789_RS03670	COG2814	Major facilitator Superfamily
CI789_RS03680	COG4172	Belongs to the ABC transporter superfamily
CI789_RS03685	COG4239	(ABC) transporter, permease
CI789_RS03690	COG4174	ABC transporter (Permease)
CI789_RS03695	COG4166	transmembrane transport
CI789_RS03700	COG2200	EAL domain
CI789_RS03705	COG0791	NLP P60 protein
CI789_RS03710	COG0671	phosphoesterase, PA-phosphatase related
CI789_RS03715	COG0523	cobalamin synthesis protein
CI789_RS03725	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CI789_RS03740	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS03740	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS03745	COG1105	Belongs to the carbohydrate kinase PfkB family
CI789_RS03750	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS03750	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS03750	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CI789_RS03755	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CI789_RS03760	COG2855	membrane
CI789_RS03765	COG0583	DNA-binding transcription factor activity
CI789_RS03770	COG0833	amino acid
CI789_RS03775	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS03795	COG0583	DNA-binding transcription factor activity
CI789_RS03800	COG0477	Major facilitator Superfamily
CI789_RS03805	COG0302	gtp cyclohydrolase
CI789_RS03810	COG2311	Membrane
CI789_RS03815	COG1609	Transcriptional regulator
CI789_RS03820	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS03835	COG2949	membrane
CI789_RS03840	COG0281	malic enzyme
CI789_RS03845	COG0295	cytidine deaminase activity
CI789_RS03850	COG1346	cytolysis
CI789_RS03855	COG1380	Effector of murein hydrolase LrgA
CI789_RS03860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CI789_RS03860	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CI789_RS03875	COG2860	membrane
CI789_RS03885	COG0655	NAD(P)H dehydrogenase (quinone) activity
CI789_RS03895	COG0583	DNA-binding transcription factor activity
CI789_RS03915	COG0667	Aldo Keto reductase
CI789_RS03930	COG0351	phosphomethylpyrimidine kinase
CI789_RS03940	COG1830	Aldolase
CI789_RS03945	COG1802	Transcriptional regulator
CI789_RS03950	COG0246	Mannitol dehydrogenase
CI789_RS03955	COG2271	Major facilitator Superfamily
CI789_RS03960	COG1063	alcohol dehydrogenase
CI789_RS03965	COG4948	Mandelate Racemase Muconate Lactonizing
CI789_RS03970	COG1597	lipid kinase activity
CI789_RS03975	COG0826	peptidase U32
CI789_RS03980	COG0745	RESPONSE REGULATOR receiver
CI789_RS03985	COG2205	protein histidine kinase activity
CI789_RS03995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CI789_RS04010	COG0667	Aldo Keto reductase
CI789_RS04020	COG0443	Heat shock 70 kDa protein
CI789_RS04030	COG3447	MASE1 domain protein
CI789_RS04030	COG5001	Diguanylate cyclase
CI789_RS04030	COG5002	protein histidine kinase activity
CI789_RS04040	COG0572	uridine kinase
CI789_RS04045	COG0717	Belongs to the dCTP deaminase family
CI789_RS04050	COG2982	Protein involved in outer membrane biogenesis
CI789_RS04055	COG1253	flavin adenine dinucleotide binding
CI789_RS04090	COG1215	transferase activity, transferring glycosyl groups
CI789_RS04120	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CI789_RS04130	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CI789_RS04140	COG1091	dTDP-4-dehydrorhamnose reductase activity
CI789_RS04175	COG3955	Domain of unknown function (DUF1919)
CI789_RS04185	COG1215	transferase activity, transferring glycosyl groups
CI789_RS04195	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CI789_RS04210	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CI789_RS04210	COG0140	phosphoribosyl-ATP diphosphatase activity
CI789_RS04220	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CI789_RS04245	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CI789_RS04255	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS04260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CI789_RS04265	COG1396	sequence-specific DNA binding
CI789_RS04265	COG1917	Cupin 2, conserved barrel domain protein
CI789_RS04270	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CI789_RS04275	COG0174	glutamine synthetase
CI789_RS04285	COG0531	amino acid
CI789_RS04290	COG2925	Exonuclease
CI789_RS04300	COG1289	transmembrane transporter activity
CI789_RS04305	COG2926	Belongs to the UPF0265 family
CI789_RS04310	COG1609	Transcriptional regulator
CI789_RS04320	COG0534	Mate efflux family protein
CI789_RS04325	COG2375	cellular response to nickel ion
CI789_RS04330	COG1695	Transcriptional regulator
CI789_RS04350	COG2190	(PTS) system
CI789_RS04350	COG1263	PTS System
CI789_RS04350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS04360	COG3711	transcriptional antiterminator
CI789_RS04365	COG1737	Transcriptional regulator
CI789_RS04375	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS04380	COG1129	ABC transporter
CI789_RS04400	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS04405	COG1129	ABC transporter
CI789_RS04410	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS04415	COG1737	Transcriptional regulator
CI789_RS04420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS04445	COG3122	Protein conserved in bacteria
CI789_RS04450	COG0583	DNA-binding transcription factor activity
CI789_RS04465	COG0564	pseudouridine synthase activity
CI789_RS04480	COG4592	Periplasmic binding protein
CI789_RS04485	COG0477	Major facilitator Superfamily
CI789_RS04490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS04495	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS04500	COG1120	ATPase activity
CI789_RS04515	COG2382	esterase
CI789_RS04520	COG4774	siderophore transport
CI789_RS04525	COG4774	siderophore transport
CI789_RS04535	COG3284	Transcriptional regulator
CI789_RS04545	COG1846	Transcriptional regulator
CI789_RS04560	COG0583	DNA-binding transcription factor activity
CI789_RS04570	COG1063	alcohol dehydrogenase
CI789_RS04575	COG0346	lactoylglutathione lyase activity
CI789_RS04580	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CI789_RS04590	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS04610	COG0469	pyruvate kinase activity
CI789_RS04615	COG1929	Belongs to the glycerate kinase type-1 family
CI789_RS04620	COG0640	Transcriptional regulator
CI789_RS04640	COG3842	ATPase activity
CI789_RS04650	COG1840	ABC-type Fe3 transport system, periplasmic component
CI789_RS04655	COG1609	Transcriptional regulator
CI789_RS04660	COG1309	transcriptional regulator
CI789_RS04675	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CI789_RS04680	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CI789_RS04705	COG4774	siderophore transport
CI789_RS04715	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS04725	COG0604	alcohol dehydrogenase
CI789_RS04730	COG0583	DNA-binding transcription factor activity
CI789_RS04735	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CI789_RS04740	COG0667	Aldo Keto reductase
CI789_RS04755	COG0583	DNA-binding transcription factor activity
CI789_RS04795	COG0745	RESPONSE REGULATOR receiver
CI789_RS04865	COG1129	ABC transporter
CI789_RS04870	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS04885	COG2814	Major facilitator Superfamily
CI789_RS04890	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS04895	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS04915	COG0601	transmembrane transport
CI789_RS04920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS04925	COG4172	Belongs to the ABC transporter superfamily
CI789_RS04940	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CI789_RS04945	COG1473	amidohydrolase
CI789_RS04980	COG4122	O-methyltransferase activity
CI789_RS04985	COG2814	Major facilitator Superfamily
CI789_RS04990	COG2771	luxR family
CI789_RS04995	COG2188	Transcriptional regulator
CI789_RS05000	COG3624	Phosphonate C-P lyase system protein PhnG
CI789_RS05005	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CI789_RS05010	COG3626	phosphonate metabolism
CI789_RS05015	COG3627	carbon phosphorus lyase activity
CI789_RS05020	COG4107	phosphonate C-P lyase system protein PhnK
CI789_RS05025	COG4778	phosphonate C-P lyase system protein PhnL
CI789_RS05030	COG3454	Phosphonate metabolism
CI789_RS05035	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CI789_RS05050	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS05060	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CI789_RS05085	COG2207	Transcriptional regulator
CI789_RS05090	COG1486	melibiose metabolic process
CI789_RS05100	COG0747	negative chemotaxis
CI789_RS05110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS05115	COG4172	Belongs to the ABC transporter superfamily
CI789_RS05120	COG1403	HNH endonuclease
CI789_RS05155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS05165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CI789_RS05170	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CI789_RS05175	COG1116	anion transmembrane transporter activity
CI789_RS05180	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CI789_RS05185	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS05215	COG1609	Transcriptional regulator
CI789_RS05225	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CI789_RS05225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CI789_RS05230	COG2723	6-phospho-beta-galactosidase activity
CI789_RS05235	COG1447	Phosphotransferase system cellobiose-specific component IIA
CI789_RS05240	COG4580	involved in the transport of maltose and maltodextrins
CI789_RS05245	COG3842	ATPase activity
CI789_RS05250	COG2182	Extracellular solute-binding protein
CI789_RS05255	COG1175	transmembrane transport
CI789_RS05260	COG3833	ABC-type maltose transport systems, permease component
CI789_RS05270	COG1874	Beta-galactosidase
CI789_RS05275	COG1263	PTS System
CI789_RS05275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS05295	COG0840	transmembrane signaling receptor activity
CI789_RS05300	COG3706	GGDEF domain
CI789_RS05305	COG4529	Protein conserved in bacteria
CI789_RS05335	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS05340	COG4221	oxidoreductase activity
CI789_RS05355	COG1335	isochorismatase
CI789_RS05360	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CI789_RS05380	COG0386	Belongs to the glutathione peroxidase family
CI789_RS05395	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS05400	COG1309	transcriptional regulator
CI789_RS05420	COG0402	S-adenosylhomocysteine deaminase activity
CI789_RS05440	COG0583	DNA-binding transcription factor activity
CI789_RS05450	COG2723	6-phospho-beta-galactosidase activity
CI789_RS05455	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CI789_RS05460	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CI789_RS05465	COG1121	(ABC) transporter
CI789_RS05470	COG0803	Belongs to the bacterial solute-binding protein 9 family
CI789_RS05490	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CI789_RS05530	COG0436	Aminotransferase
CI789_RS05535	COG1213	nucleotidyl transferase
CI789_RS05540	COG1183	phosphatidylcholine synthase activity
CI789_RS05545	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CI789_RS05555	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CI789_RS05560	COG1213	nucleotidyl transferase
CI789_RS05560	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CI789_RS05570	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CI789_RS05570	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CI789_RS05575	COG0028	Belongs to the TPP enzyme family
CI789_RS05575	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CI789_RS05580	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS05640	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CI789_RS05645	COG2948	multi-organism process
CI789_RS05650	COG3504	Conjugal transfer protein
CI789_RS05655	COG3736	Type IV secretory pathway, component VirB8
CI789_RS05715	COG2814	Major facilitator Superfamily
CI789_RS05765	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CI789_RS05770	COG0583	DNA-binding transcription factor activity
CI789_RS05775	COG1486	melibiose metabolic process
CI789_RS05780	COG3118	belongs to the thioredoxin family
CI789_RS05785	COG2207	Transcriptional regulator
CI789_RS05790	COG1881	PFAM PEBP family protein
CI789_RS05795	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS05805	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS05815	COG1609	Transcriptional regulator
CI789_RS05820	COG2211	Major facilitator Superfamily
CI789_RS05840	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CI789_RS05845	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CI789_RS05850	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CI789_RS05870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CI789_RS05875	COG4232	protein-disulfide reductase activity
CI789_RS05885	COG0642	Histidine kinase
CI789_RS05905	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS05920	COG2814	Major facilitator Superfamily
CI789_RS05925	COG1309	transcriptional regulator
CI789_RS05940	COG3414	Phosphotransferase system galactitol-specific IIB component
CI789_RS05945	COG3775	system Galactitol-specific IIC component
CI789_RS05950	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CI789_RS05960	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CI789_RS05970	COG1129	ABC transporter
CI789_RS05975	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS05980	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS05985	COG1070	Carbohydrate kinase
CI789_RS06015	COG0436	Aminotransferase
CI789_RS06020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS06030	COG0456	acetyltransferase
CI789_RS06045	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CI789_RS06095	COG0582	viral genome integration into host DNA
CI789_RS06105	COG3228	Belongs to the MtfA family
CI789_RS06115	COG1418	mRNA catabolic process
CI789_RS06125	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CI789_RS06135	COG3727	T/G mismatch-specific endonuclease activity
CI789_RS06140	COG0697	spore germination
CI789_RS06150	COG2354	Protein conserved in bacteria
CI789_RS06155	COG5475	Uncharacterized small protein (DUF2158)
CI789_RS06170	COG0366	Alpha amylase catalytic
CI789_RS06180	COG1516	flagellar protein fliS
CI789_RS06185	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CI789_RS06195	COG0438	transferase activity, transferring glycosyl groups
CI789_RS06195	COG1216	Glycosyl transferase, family 2
CI789_RS06200	COG0438	transferase activity, transferring glycosyl groups
CI789_RS06200	COG1216	Glycosyl transferase, family 2
CI789_RS06220	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
CI789_RS06250	COG4763	Acyl-transferase
CI789_RS06260	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CI789_RS06265	COG0183	Belongs to the thiolase family
CI789_RS06280	COG0583	DNA-binding transcription factor activity
CI789_RS06285	COG4948	Mandelate Racemase Muconate Lactonizing
CI789_RS06300	COG0506	proline dehydrogenase activity
CI789_RS06300	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CI789_RS06300	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CI789_RS06325	COG1702	phosphate starvation-inducible protein PhoH
CI789_RS06330	COG0778	Nitroreductase
CI789_RS06360	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CI789_RS06365	COG3381	protein complex oligomerization
CI789_RS06380	COG0519	Catalyzes the synthesis of GMP from XMP
CI789_RS06380	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CI789_RS06390	COG1216	Glycosyl transferase, family 2
CI789_RS06405	COG0431	NADPH-dependent FMN reductase
CI789_RS06410	COG0113	porphobilinogen synthase activity
CI789_RS06430	COG1609	Transcriptional regulator
CI789_RS06435	COG1263	PTS System
CI789_RS06435	COG2190	(PTS) system
CI789_RS06435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS06485	COG0835	chemotaxis
CI789_RS06495	COG0840	transmembrane signaling receptor activity
CI789_RS06500	COG0840	transmembrane signaling receptor activity
CI789_RS06505	COG0840	transmembrane signaling receptor activity
CI789_RS06510	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CI789_RS06520	COG0745	RESPONSE REGULATOR receiver
CI789_RS06530	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CI789_RS06545	COG0018	arginyl-trna synthetase
CI789_RS06550	COG3102	Protein conserved in bacteria
CI789_RS06555	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CI789_RS06560	COG3142	Participates in the control of copper homeostasis
CI789_RS06575	COG0500	methyltransferase
CI789_RS06580	COG2226	methyltransferase
CI789_RS06585	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CI789_RS06590	COG1801	Protein of unknown function DUF72
CI789_RS06595	COG1335	isochorismatase
CI789_RS06600	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CI789_RS06605	COG0494	nUDIX hydrolase
CI789_RS06610	COG0217	transcriptional regulatory protein
CI789_RS06615	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CI789_RS06620	COG0632	four-way junction helicase activity
CI789_RS06625	COG2255	four-way junction helicase activity
CI789_RS06630	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CI789_RS06640	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CI789_RS06645	COG0739	heme binding
CI789_RS06650	COG1560	Kdo2-lipid A biosynthetic process
CI789_RS06660	COG0469	pyruvate kinase activity
CI789_RS06690	COG1737	Transcriptional regulator
CI789_RS06695	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CI789_RS06705	COG0800	Aldolase
CI789_RS06710	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CI789_RS06715	COG3141	response to X-ray
CI789_RS06720	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CI789_RS06720	COG1082	Xylose isomerase domain protein TIM barrel
CI789_RS06725	COG2979	Protein of unknown function (DUF533)
CI789_RS06730	COG1770	oligopeptidase
CI789_RS06735	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CI789_RS06740	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CI789_RS06740	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CI789_RS06750	COG2372	response to copper ion
CI789_RS06755	COG1276	copper resistance
CI789_RS06770	COG4695	Portal protein
CI789_RS06875	COG0628	permease
CI789_RS06890	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CI789_RS06890	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
CI789_RS06895	COG3008	intermembrane lipid transfer
CI789_RS06900	COG2995	paraquat-inducible protein a
CI789_RS06905	COG1956	GAF domain-containing protein
CI789_RS06910	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CI789_RS06920	COG0501	Belongs to the peptidase M48B family
CI789_RS06930	COG1414	Transcriptional regulator
CI789_RS06960	COG2226	methyltransferase
CI789_RS06970	COG3716	PTS system mannose fructose sorbose family IID component
CI789_RS06975	COG3715	PTS system
CI789_RS06980	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS06980	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS06985	COG1253	flavin adenine dinucleotide binding
CI789_RS06990	COG2200	EAL domain
CI789_RS06995	COG1760	l-serine dehydratase
CI789_RS07010	COG3140	Belongs to the UPF0181 family
CI789_RS07015	COG0251	oxidation-reduction process
CI789_RS07020	COG1199	ATP-dependent helicase activity
CI789_RS07030	COG3065	identical protein binding
CI789_RS07035	COG0318	PFAM AMP-dependent synthetase and ligase
CI789_RS07045	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CI789_RS07050	COG2894	cell division
CI789_RS07055	COG0850	regulation of cytokinetic process
CI789_RS07060	COG3100	YcgL domain-containing protein
CI789_RS07065	COG2951	lytic endotransglycosylase activity
CI789_RS07070	COG0179	Fumarylacetoacetate (FAA) hydrolase
CI789_RS07085	COG2186	Transcriptional regulator
CI789_RS07090	COG2719	SpoVR family
CI789_RS07095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CI789_RS07100	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CI789_RS07120	COG2718	Belongs to the UPF0229 family
CI789_RS07125	COG2766	serine protein kinase
CI789_RS07130	COG3713	MltA-interacting MipA family protein
CI789_RS07135	COG0656	L-ascorbic acid biosynthetic process
CI789_RS07155	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CI789_RS07160	COG3139	Protein of unknown function (DUF1315)
CI789_RS07165	COG1335	isochorismatase
CI789_RS07170	COG0252	asparaginase activity
CI789_RS07175	COG0616	signal peptide processing
CI789_RS07180	COG0778	Nitroreductase
CI789_RS07200	COG0708	Exodeoxyribonuclease III
CI789_RS07220	COG0788	formyltetrahydrofolate deformylase activity
CI789_RS07225	COG3012	SEC-C Motif Domain Protein
CI789_RS07230	COG1752	Esterase of the alpha-beta hydrolase superfamily
CI789_RS07235	COG0745	RESPONSE REGULATOR receiver
CI789_RS07240	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CI789_RS07265	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS07265	COG1454	alcohol dehydrogenase
CI789_RS07270	COG2095	MarC family integral membrane protein
CI789_RS07280	COG0601	transmembrane transport
CI789_RS07285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS07295	COG4608	Belongs to the ABC transporter superfamily
CI789_RS07300	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CI789_RS07305	COG3099	Belongs to the UPF0263 family
CI789_RS07310	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CI789_RS07315	COG2350	Protein conserved in bacteria
CI789_RS07330	COG2917	probably involved in intracellular septation
CI789_RS07340	COG3047	cAMP biosynthetic process
CI789_RS07350	COG0159	tryptophan synthase activity
CI789_RS07355	COG0133	tryptophan synthase activity
CI789_RS07365	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CI789_RS07370	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CI789_RS07370	COG0512	Glutamine amidotransferase of anthranilate synthase
CI789_RS07385	COG0009	L-threonylcarbamoyladenylate synthase
CI789_RS07395	COG1187	pseudouridine synthase activity
CI789_RS07405	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS07410	COG0616	signal peptide processing
CI789_RS07420	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CI789_RS07425	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CI789_RS07430	COG0714	Associated with various cellular activities
CI789_RS07435	COG3831	ATPase activity
CI789_RS07470	COG0671	phosphoesterase, PA-phosphatase related
CI789_RS07475	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CI789_RS07480	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CI789_RS07485	COG0284	orotidine-5'-phosphate decarboxylase activity
CI789_RS07490	COG0023	Translation Initiation Factor
CI789_RS07500	COG0235	Class ii aldolase
CI789_RS07505	COG1024	Enoyl-CoA hydratase
CI789_RS07510	COG5001	Diguanylate cyclase
CI789_RS07515	COG1966	Carbon starvation protein
CI789_RS07520	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
CI789_RS07530	COG1263	PTS System
CI789_RS07530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS07550	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CI789_RS07550	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CI789_RS07580	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CI789_RS07585	COG1842	Phage shock protein A
CI789_RS07595	COG1983	PspC domain protein
CI789_RS07605	COG3106	COG3106 Predicted ATPase
CI789_RS07610	COG3768	UPF0283 membrane protein
CI789_RS07620	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CI789_RS07625	COG4948	Mandelate Racemase Muconate Lactonizing
CI789_RS07630	COG2866	Carboxypeptidase
CI789_RS07635	COG4166	transmembrane transport
CI789_RS07670	COG0477	Major facilitator Superfamily
CI789_RS07690	COG4221	oxidoreductase activity
CI789_RS07695	COG0402	S-adenosylhomocysteine deaminase activity
CI789_RS07715	COG0339	signal peptide processing
CI789_RS07725	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CI789_RS07730	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS07745	COG4977	sequence-specific DNA binding
CI789_RS07765	COG3254	rhamnose metabolic process
CI789_RS07770	COG2814	Major facilitator Superfamily
CI789_RS07790	COG2207	Transcriptional regulator
CI789_RS07790	COG3708	Transcriptional regulator
CI789_RS07805	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CI789_RS07810	COG2011	ABC-type metal ion transport system permease component
CI789_RS07835	COG1546	Belongs to the CinA family
CI789_RS07845	COG3111	PFAM Bacterial OB fold (BOF) protein
CI789_RS07855	COG2323	membrane
CI789_RS07905	COG3038	cytochrome b561
CI789_RS07925	COG4319	ketosteroid isomerase
CI789_RS07930	COG3284	Transcriptional regulator
CI789_RS07945	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CI789_RS07950	COG0583	DNA-binding transcription factor activity
CI789_RS07970	COG2200	EAL domain
CI789_RS07980	COG2971	BadF BadG BcrA BcrD
CI789_RS07985	COG1940	carbohydrate kinase activity
CI789_RS08005	COG1175	transmembrane transport
CI789_RS08010	COG0395	ABC-type sugar transport system, permease component
CI789_RS08025	COG3038	cytochrome b561
CI789_RS08035	COG0667	Aldo Keto reductase
CI789_RS08040	COG0583	DNA-binding transcription factor activity
CI789_RS08055	COG2814	Major facilitator Superfamily
CI789_RS08060	COG1408	metallophosphoesterase
CI789_RS08080	COG1393	Belongs to the ArsC family
CI789_RS08085	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CI789_RS08090	COG0640	Transcriptional regulator
CI789_RS08105	COG1649	PFAM Uncharacterised BCR, COG1649
CI789_RS08145	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CI789_RS08170	COG4773	Receptor
CI789_RS08185	COG0095	Lipoate-protein ligase
CI789_RS08190	COG0439	Biotin carboxylase
CI789_RS08205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CI789_RS08205	COG1116	anion transmembrane transporter activity
CI789_RS08210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CI789_RS08220	COG0477	Major facilitator Superfamily
CI789_RS08230	COG0702	epimerase
CI789_RS08235	COG0702	epimerase
CI789_RS08240	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CI789_RS08250	COG0840	transmembrane signaling receptor activity
CI789_RS08255	COG1120	ATPase activity
CI789_RS08260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS08265	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS08270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS08315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS08320	COG3781	membrane
CI789_RS08330	COG0673	inositol 2-dehydrogenase activity
CI789_RS08350	COG3479	Phenolic acid decarboxylase
CI789_RS08365	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CI789_RS08370	COG3048	D-serine ammonia-lyase activity
CI789_RS08375	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CI789_RS08385	COG2707	UPF0756 membrane protein
CI789_RS08405	COG0477	Major facilitator Superfamily
CI789_RS08415	COG2011	ABC-type metal ion transport system permease component
CI789_RS08440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS08470	COG0747	negative chemotaxis
CI789_RS08475	COG2195	Cleaves the N-terminal amino acid of tripeptides
CI789_RS08485	COG2378	regulation of single-species biofilm formation
CI789_RS08495	COG0436	Aminotransferase
CI789_RS08525	COG0583	DNA-binding transcription factor activity
CI789_RS08530	COG2840	Smr protein MutS2
CI789_RS08535	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CI789_RS08555	COG3182	Iron-regulated membrane protein
CI789_RS08560	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CI789_RS08565	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CI789_RS08575	COG0531	amino acid
CI789_RS08585	COG0745	RESPONSE REGULATOR receiver
CI789_RS08590	COG2205	protein histidine kinase activity
CI789_RS08595	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CI789_RS08605	COG3591	Belongs to the peptidase S1B family
CI789_RS08610	COG1643	Atp-dependent helicase
CI789_RS08615	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CI789_RS08620	COG3784	Protein of unknown function (DUF1318)
CI789_RS08630	COG2911	Protein conserved in bacteria
CI789_RS08635	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CI789_RS08645	COG1285	pathogenesis
CI789_RS08655	COG0513	Belongs to the DEAD box helicase family
CI789_RS08685	COG1940	carbohydrate kinase activity
CI789_RS08690	COG0583	DNA-binding transcription factor activity
CI789_RS08695	COG2814	Major facilitator Superfamily
CI789_RS08720	COG1482	cell wall glycoprotein biosynthetic process
CI789_RS08725	COG5339	Protein conserved in bacteria
CI789_RS08735	COG1609	Transcriptional regulator
CI789_RS08740	COG1263	PTS System
CI789_RS08740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS08745	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CI789_RS08750	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CI789_RS08755	COG0673	inositol 2-dehydrogenase activity
CI789_RS08765	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS08775	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS08780	COG1069	ribulokinase activity
CI789_RS08785	COG2160	L-arabinose isomerase activity
CI789_RS08790	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CI789_RS08800	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS08805	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS08810	COG1129	ABC transporter
CI789_RS08815	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS08830	COG4657	Part of a membrane complex involved in electron transport
CI789_RS08835	COG2878	Part of a membrane complex involved in electron transport
CI789_RS08840	COG4656	Part of a membrane complex involved in electron transport
CI789_RS08845	COG4658	electron transport chain
CI789_RS08850	COG4659	FMN binding
CI789_RS08855	COG4660	Part of a membrane complex involved in electron transport
CI789_RS08860	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CI789_RS08880	COG1309	transcriptional regulator
CI789_RS08900	COG0583	DNA-binding transcription factor activity
CI789_RS08905	COG0625	glutathione transferase activity
CI789_RS08910	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CI789_RS08915	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CI789_RS08920	COG0259	pyridoxamine-phosphate oxidase activity
CI789_RS08925	COG3895	Periplasmic Protein
CI789_RS08930	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CI789_RS08950	COG1566	PFAM secretion protein HlyD family protein
CI789_RS08955	COG1289	transmembrane transporter activity
CI789_RS08960	COG4989	oxidoreductase activity
CI789_RS08965	COG3313	Fe-S protein
CI789_RS08970	COG0583	DNA-binding transcription factor activity
CI789_RS08975	COG2910	NAD(P)H-binding
CI789_RS08980	COG2194	sulfuric ester hydrolase activity
CI789_RS08985	COG1309	transcriptional regulator
CI789_RS08990	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS08995	COG0346	lactoylglutathione lyase activity
CI789_RS09005	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CI789_RS09010	COG0791	NLP P60 protein
CI789_RS09020	COG1609	Transcriptional regulator
CI789_RS09025	COG0583	DNA-binding transcription factor activity
CI789_RS09035	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CI789_RS09040	COG0307	riboflavin synthase, alpha
CI789_RS09080	COG2166	iron-sulfur cluster assembly
CI789_RS09090	COG0719	Fe-S assembly protein
CI789_RS09095	COG0396	ATPase activity
CI789_RS09100	COG0719	Fe-S assembly protein
CI789_RS09105	COG0316	Belongs to the HesB IscA family
CI789_RS09115	COG2050	protein possibly involved in aromatic compounds catabolism
CI789_RS09120	COG0277	FAD linked oxidase domain protein
CI789_RS09120	COG0247	lactate metabolic process
CI789_RS09125	COG0628	permease
CI789_RS09135	COG0574	Belongs to the PEP-utilizing enzyme family
CI789_RS09135	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CI789_RS09140	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CI789_RS09145	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CI789_RS09150	COG3720	iron ion transport
CI789_RS09155	COG4558	Periplasmic binding protein
CI789_RS09160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS09165	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CI789_RS09170	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CI789_RS09180	COG0791	NLP P60 protein
CI789_RS09190	COG0386	Belongs to the glutathione peroxidase family
CI789_RS09200	COG0776	regulation of translation
CI789_RS09210	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CI789_RS09215	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CI789_RS09220	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CI789_RS09230	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CI789_RS09240	COG3137	Salt-induced outer membrane protein
CI789_RS09250	COG3001	Fructosamine kinase
CI789_RS09260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CI789_RS09275	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS09280	COG1988	membrane-bound metal-dependent
CI789_RS09285	COG1823	symporter activity
CI789_RS09290	COG0753	catalase activity
CI789_RS09295	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS09300	COG1309	transcriptional regulator
CI789_RS09305	COG2814	Major facilitator Superfamily
CI789_RS09310	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CI789_RS09315	COG0322	excinuclease ABC activity
CI789_RS09320	COG3678	ATP-independent chaperone mediated protein folding
CI789_RS09325	COG2988	succinylglutamate desuccinylase activity
CI789_RS09330	COG3724	N-succinylarginine dihydrolase activity
CI789_RS09335	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS09350	COG3781	membrane
CI789_RS09355	COG4932	domain protein
CI789_RS09365	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS09370	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CI789_RS09375	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS09380	COG1129	ABC transporter
CI789_RS09390	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS09395	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS09400	COG3958	Transketolase
CI789_RS09405	COG3959	Transketolase, thiamine diphosphate binding domain
CI789_RS09410	COG1349	DNA-binding transcription factor activity
CI789_RS09415	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CI789_RS09415	COG1648	precorrin-2 dehydrogenase activity
CI789_RS09420	COG2146	nitrite reductase [NAD(P)H] activity
CI789_RS09420	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CI789_RS09425	COG3707	response regulator
CI789_RS09470	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CI789_RS09500	COG4572	Cation transport regulator
CI789_RS09505	COG0387	Pfam Sodium calcium exchanger
CI789_RS09510	COG3187	Heat shock protein
CI789_RS09515	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CI789_RS09520	COG2912	Transglutaminase-like superfamily
CI789_RS09530	COG2890	protein-(glutamine-N5) methyltransferase activity
CI789_RS09535	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CI789_RS09540	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CI789_RS09545	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CI789_RS09550	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CI789_RS09560	COG0583	DNA-binding transcription factor activity
CI789_RS09565	COG0477	Major facilitator Superfamily
CI789_RS09580	COG0193	aminoacyl-tRNA hydrolase activity
CI789_RS09590	COG0659	secondary active sulfate transmembrane transporter activity
CI789_RS09595	COG0012	GTP binding
CI789_RS09600	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CI789_RS09605	COG0583	DNA-binding transcription factor activity
CI789_RS09630	COG0243	molybdopterin cofactor binding
CI789_RS09635	COG1309	transcriptional regulator
CI789_RS09645	COG0668	transmembrane transport
CI789_RS09650	COG1846	Transcriptional regulator
CI789_RS09660	COG0840	transmembrane signaling receptor activity
CI789_RS09670	COG0456	acetyltransferase
CI789_RS09675	COG0318	PFAM AMP-dependent synthetase and ligase
CI789_RS09680	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CI789_RS09685	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CI789_RS09690	COG0156	8-amino-7-oxononanoate synthase activity
CI789_RS09695	COG0795	lipopolysaccharide-transporting ATPase activity
CI789_RS09700	COG0795	lipopolysaccharide-transporting ATPase activity
CI789_RS09705	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CI789_RS09715	COG2244	polysaccharide biosynthetic process
CI789_RS09720	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CI789_RS09725	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CI789_RS09730	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CI789_RS09770	COG3290	protein histidine kinase activity
CI789_RS09775	COG4565	transcriptional regulatory protein
CI789_RS09795	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CI789_RS09795	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CI789_RS09800	COG0840	transmembrane signaling receptor activity
CI789_RS09805	COG3152	Membrane
CI789_RS09820	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CI789_RS09825	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CI789_RS09830	COG2261	transglycosylase associated protein
CI789_RS09835	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CI789_RS09845	COG1619	proteins homologs of microcin C7 resistance protein MccF
CI789_RS09855	COG2226	methyltransferase
CI789_RS09885	COG0583	DNA-binding transcription factor activity
CI789_RS09900	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CI789_RS09940	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CI789_RS09950	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CI789_RS09970	COG1309	transcriptional regulator
CI789_RS09980	COG2814	Major facilitator Superfamily
CI789_RS10005	COG1605	Chorismate mutase
CI789_RS10015	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CI789_RS10025	COG2200	EAL domain
CI789_RS10030	COG1598	PFAM Uncharacterised protein family UPF0150
CI789_RS10035	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
CI789_RS10055	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CI789_RS10075	COG3111	PFAM Bacterial OB fold (BOF) protein
CI789_RS10085	COG0538	isocitrate dehydrogenase activity
CI789_RS10105	COG2915	High frequency lysogenization protein hflD homolog
CI789_RS10110	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CI789_RS10115	COG0745	RESPONSE REGULATOR receiver
CI789_RS10125	COG2850	peptidyl-arginine hydroxylation
CI789_RS10130	COG2195	Cleaves the N-terminal amino acid of tripeptides
CI789_RS10135	COG1396	sequence-specific DNA binding
CI789_RS10140	COG3135	benzoate transporter
CI789_RS10145	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CI789_RS10150	COG4591	ABC-type transport system involved in lipoprotein release permease component
CI789_RS10160	COG4591	ABC-type transport system involved in lipoprotein release permease component
CI789_RS10165	COG2199	diguanylate cyclase activity
CI789_RS10205	COG0784	Response regulator, receiver
CI789_RS10205	COG0835	chemotaxis
CI789_RS10215	COG1677	Flagellar hook-basal body complex protein FliE
CI789_RS10230	COG1317	bacterial-type flagellum organization
CI789_RS10250	COG1580	Controls the rotational direction of flagella during chemotaxis
CI789_RS10255	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CI789_RS10270	COG1338	Plays a role in the flagellum-specific transport system
CI789_RS10290	COG0840	transmembrane signaling receptor activity
CI789_RS10310	COG1215	transferase activity, transferring glycosyl groups
CI789_RS10315	COG3706	GGDEF domain
CI789_RS10325	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CI789_RS10330	COG3134	Outer membrane lipoprotein
CI789_RS10335	COG1252	NADH dehydrogenase
CI789_RS10345	COG1472	Belongs to the glycosyl hydrolase 3 family
CI789_RS10355	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
CI789_RS10360	COG5633	Lipoprotein
CI789_RS10365	COG0537	adenosine 5'-monophosphoramidase activity
CI789_RS10375	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CI789_RS10380	COG1263	PTS System
CI789_RS10380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS10385	COG0084	hydrolase, TatD family'
CI789_RS10395	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CI789_RS10400	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CI789_RS10405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CI789_RS10410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CI789_RS10415	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CI789_RS10425	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CI789_RS10430	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CI789_RS10435	COG0416	fatty acid biosynthetic process
CI789_RS10440	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CI789_RS10445	COG1399	metal-binding, possibly nucleic acid-binding protein
CI789_RS10450	COG0424	maF-like protein
CI789_RS10465	COG1530	ribonuclease E activity
CI789_RS10465	COG1530	ribonuclease E activity
CI789_RS10470	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS10480	COG1256	bacterial-type flagellum assembly
CI789_RS10505	COG4787	bacterial-type flagellum-dependent cell motility
CI789_RS10510	COG1749	Flagellar hook protein flgE
CI789_RS10515	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CI789_RS10520	COG1558	bacterial-type flagellum-dependent cell motility
CI789_RS10525	COG1815	bacterial-type flagellum-dependent cell motility
CI789_RS10530	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CI789_RS10535	COG2747	anti-sigma28 factor FlgM
CI789_RS10560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CI789_RS10565	COG2999	glutathione oxidoreductase activity
CI789_RS10575	COG0418	dihydroorotase activity
CI789_RS10600	COG0477	Major facilitator Superfamily
CI789_RS10605	COG3038	cytochrome b561
CI789_RS10615	COG1054	Belongs to the UPF0176 family
CI789_RS10620	COG1560	Kdo2-lipid A biosynthetic process
CI789_RS10635	COG0494	nUDIX hydrolase
CI789_RS10650	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CI789_RS10665	COG5645	(Lipo)protein
CI789_RS10685	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CI789_RS10720	COG1846	Transcriptional regulator
CI789_RS10730	COG3730	PTS system glucitol sorbitol-specific
CI789_RS10740	COG3731	PTS system glucitol sorbitol-specific IIA component
CI789_RS10745	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS10750	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS10755	COG1349	DNA-binding transcription factor activity
CI789_RS10760	COG0517	IMP dehydrogenase activity
CI789_RS10760	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CI789_RS10780	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CI789_RS10785	COG0322	excinuclease ABC activity
CI789_RS10790	COG2197	response regulator
CI789_RS10800	COG3136	membrane protein required for alginate biosynthesis
CI789_RS10810	COG2197	response regulator
CI789_RS10820	COG1113	amino acid transport
CI789_RS10830	COG1309	transcriptional regulator
CI789_RS10835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS10845	COG0251	oxidation-reduction process
CI789_RS10850	COG2267	carboxylic ester hydrolase activity
CI789_RS10860	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CI789_RS10865	COG2233	PERMEase
CI789_RS10875	COG3729	General stress protein
CI789_RS10885	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS10915	COG3188	usher protein
CI789_RS10940	COG0670	Belongs to the BI1 family
CI789_RS10945	COG2920	part of a sulfur-relay system
CI789_RS10955	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CI789_RS10960	COG3785	DNA binding
CI789_RS10965	COG1832	CoA-binding protein
CI789_RS10975	COG1803	Methylglyoxal synthase
CI789_RS10980	COG0210	DNA helicase
CI789_RS10985	COG3304	Inner membrane component domain
CI789_RS10990	COG1289	transmembrane transporter activity
CI789_RS10995	COG3070	regulator of competence-specific genes
CI789_RS11010	COG2885	chlorophyll binding
CI789_RS11010	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CI789_RS11015	COG3120	sequence-specific DNA binding
CI789_RS11020	COG1067	ATP-dependent peptidase activity
CI789_RS11025	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CI789_RS11030	COG3130	regulation of translation
CI789_RS11040	COG3009	Protein conserved in bacteria
CI789_RS11045	COG3008	intermembrane lipid transfer
CI789_RS11045	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CI789_RS11050	COG2995	paraquat-inducible protein a
CI789_RS11055	COG0488	(ABC) transporter
CI789_RS11060	COG0116	Belongs to the methyltransferase superfamily
CI789_RS11060	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CI789_RS11065	COG0633	Ferredoxin
CI789_RS11065	COG3217	Mosc domain protein beta barrel domain protein
CI789_RS11075	COG0167	dihydroorotate dehydrogenase activity
CI789_RS11080	COG0431	NADPH-dependent FMN reductase
CI789_RS11085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CI789_RS11095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CI789_RS11105	COG0308	aminopeptidase N
CI789_RS11110	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CI789_RS11115	COG0017	Asparaginyl-tRNA synthetase
CI789_RS11125	COG1448	Aminotransferase
CI789_RS11130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CI789_RS11135	COG3108	Peptidase M15
CI789_RS11140	COG2989	Protein conserved in bacteria
CI789_RS11145	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CI789_RS11150	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CI789_RS11160	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CI789_RS11165	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CI789_RS11170	COG3173	Aminoglycoside phosphotransferase
CI789_RS11175	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CI789_RS11180	COG2835	tetraacyldisaccharide 4'-kinase activity
CI789_RS11185	COG3214	Protein conserved in bacteria
CI789_RS11190	COG1663	tetraacyldisaccharide 4'-kinase activity
CI789_RS11200	COG2333	competence protein COMEC
CI789_RS11200	COG0658	competence protein
CI789_RS11205	COG0776	regulation of translation
CI789_RS11210	COG0539	negative regulation of cytoplasmic translation
CI789_RS11225	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CI789_RS11230	COG1944	ATP diphosphatase activity
CI789_RS11235	COG2116	formate transmembrane transporter activity
CI789_RS11240	COG1882	Formate acetyltransferase
CI789_RS11245	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CI789_RS11250	COG0477	Major facilitator Superfamily
CI789_RS11255	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CI789_RS11260	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CI789_RS11265	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CI789_RS11270	COG1674	ftsk spoiiie
CI789_RS11270	COG3107	peptidoglycan biosynthetic process
CI789_RS11285	COG0492	ferredoxin-NADP+ reductase activity
CI789_RS11290	COG4988	ABC transporter
CI789_RS11295	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CI789_RS11300	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CI789_RS11305	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CI789_RS11320	COG0542	response to heat
CI789_RS11325	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CI789_RS11330	COG1278	Cold shock
CI789_RS11335	COG3593	DNA synthesis involved in DNA repair
CI789_RS11345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CI789_RS11350	COG0028	Belongs to the TPP enzyme family
CI789_RS11355	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CI789_RS11360	COG3023	N-Acetylmuramoyl-L-alanine amidase
CI789_RS11365	COG0393	Putative heavy-metal-binding
CI789_RS11375	COG1126	abc transporter atp-binding protein
CI789_RS11380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS11385	COG4215	(ABC) transporter
CI789_RS11390	COG4160	amino acid transport
CI789_RS11395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS11400	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CI789_RS11410	COG1473	amidohydrolase
CI789_RS11415	COG1177	transmembrane transport
CI789_RS11420	COG1176	ABC-type spermidine putrescine transport system, permease component I
CI789_RS11425	COG3842	ATPase activity
CI789_RS11430	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CI789_RS11450	COG0778	Nitroreductase
CI789_RS11480	COG0671	phosphoesterase, PA-phosphatase related
CI789_RS11485	COG0814	amino acid
CI789_RS11490	COG1686	Belongs to the peptidase S11 family
CI789_RS11500	COG2133	pyrroloquinoline quinone binding
CI789_RS11540	COG0303	'Molybdopterin
CI789_RS11550	COG4251	negative regulation of phosphorylation
CI789_RS11550	COG3706	GGDEF domain
CI789_RS11550	COG2203	Gaf domain
CI789_RS11550	COG5001	Diguanylate cyclase
CI789_RS11555	COG0488	(ABC) transporter
CI789_RS11560	COG2814	Major facilitator Superfamily
CI789_RS11575	COG1566	PFAM secretion protein HlyD family protein
CI789_RS11580	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CI789_RS11585	COG1321	iron dependent repressor
CI789_RS11590	COG2194	sulfuric ester hydrolase activity
CI789_RS11595	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CI789_RS11605	COG0783	Belongs to the Dps family
CI789_RS11610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS11615	COG0765	amino acid transport
CI789_RS11620	COG1126	abc transporter atp-binding protein
CI789_RS11625	COG0668	transmembrane transport
CI789_RS11630	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
CI789_RS11640	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CI789_RS11650	COG1228	amidohydrolase
CI789_RS11655	COG0402	S-adenosylhomocysteine deaminase activity
CI789_RS11670	COG2986	histidine ammonia-lyase
CI789_RS11675	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CI789_RS11680	COG1473	amidohydrolase
CI789_RS11685	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CI789_RS11705	COG0789	Transcriptional regulator
CI789_RS11715	COG4221	oxidoreductase activity
CI789_RS11730	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CI789_RS11740	COG2268	Band 7 protein
CI789_RS11755	COG0477	Major facilitator Superfamily
CI789_RS11770	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CI789_RS11780	COG3755	Protein conserved in bacteria
CI789_RS11790	COG1472	Belongs to the glycosyl hydrolase 3 family
CI789_RS11795	COG0277	FAD linked oxidase domain protein
CI789_RS11800	COG1196	nuclear chromosome segregation
CI789_RS11800	COG3264	Mechanosensitive ion channel
CI789_RS11810	COG1686	Belongs to the peptidase S11 family
CI789_RS11820	COG0586	Pfam SNARE associated Golgi protein
CI789_RS11830	COG0747	negative chemotaxis
CI789_RS11840	COG0444	Belongs to the ABC transporter superfamily
CI789_RS11850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CI789_RS11855	COG3387	PFAM Glycoside hydrolase 15-related
CI789_RS11860	COG1376	ErfK ybiS ycfS ynhG family protein
CI789_RS11875	COG0306	phosphate transporter
CI789_RS11890	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CI789_RS11895	COG0513	Belongs to the DEAD box helicase family
CI789_RS11900	COG2807	transmembrane transport
CI789_RS11910	COG3568	Endonuclease Exonuclease Phosphatase
CI789_RS11915	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CI789_RS11920	COG0392	lysyltransferase activity
CI789_RS11925	COG0670	Belongs to the BI1 family
CI789_RS11930	COG0840	transmembrane signaling receptor activity
CI789_RS11945	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CI789_RS11950	COG0315	cyclic pyranopterin monophosphate synthase activity
CI789_RS11955	COG0521	Mo-molybdopterin cofactor biosynthetic process
CI789_RS11970	COG0556	nucleotide-excision repair
CI789_RS11980	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CI789_RS11990	COG0156	8-amino-7-oxononanoate synthase activity
CI789_RS11995	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CI789_RS12005	COG2130	NADP-dependent
CI789_RS12015	COG1881	PFAM PEBP family protein
CI789_RS12020	COG2706	6-phosphogluconolactonase activity
CI789_RS12030	COG0561	phosphatase activity
CI789_RS12200	COG4149	molybdate abc transporter
CI789_RS12205	COG0725	ABC transporter, periplasmic molybdate-binding protein
CI789_RS12220	COG1119	ATPase activity
CI789_RS12230	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CI789_RS12235	COG2017	converts alpha-aldose to the beta-anomer
CI789_RS12240	COG0588	phosphoglycerate mutase activity
CI789_RS12245	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CI789_RS12260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS12260	COG2205	protein histidine kinase activity
CI789_RS12265	COG1230	cation diffusion facilitator family transporter
CI789_RS12275	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CI789_RS12280	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CI789_RS12345	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CI789_RS12350	COG2885	chlorophyll binding
CI789_RS12355	COG0823	Involved in the tonB-independent uptake of proteins
CI789_RS12360	COG3064	Membrane
CI789_RS12365	COG0848	biopolymer transport protein
CI789_RS12370	COG0811	peptide transport
CI789_RS12375	COG0824	Thioesterase
CI789_RS12385	COG4890	Cyd operon protein YbgT
CI789_RS12390	COG1294	oxidase, subunit
CI789_RS12395	COG1271	oxidase subunit
CI789_RS12400	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CI789_RS12405	COG0045	succinate-CoA ligase (ADP-forming) activity
CI789_RS12410	COG0508	dehydrogenase complex catalyzes the overall conversion of
CI789_RS12415	COG0567	Dehydrogenase, E1 component
CI789_RS12420	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CI789_RS12430	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CI789_RS12435	COG2009	succinate dehydrogenase
CI789_RS12440	COG0372	Belongs to the citrate synthase family
CI789_RS12450	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CI789_RS12465	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CI789_RS12470	COG1984	allophanate hydrolase subunit 2
CI789_RS12475	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CI789_RS12485	COG0415	Belongs to the DNA photolyase family
CI789_RS12490	COG3272	Protein of unknown function (DUF1722)
CI789_RS12500	COG0745	RESPONSE REGULATOR receiver
CI789_RS12510	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CI789_RS12515	COG0596	Alpha beta hydrolase
CI789_RS12530	COG0735	belongs to the Fur family
CI789_RS12550	COG0814	amino acid
CI789_RS12565	COG0583	DNA-binding transcription factor activity
CI789_RS12570	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CI789_RS12575	COG1263	PTS System
CI789_RS12575	COG2190	(PTS) system
CI789_RS12575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CI789_RS12580	COG0363	glucosamine-6-phosphate deaminase activity
CI789_RS12585	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CI789_RS12590	COG1940	carbohydrate kinase activity
CI789_RS12590	COG1846	Transcriptional regulator
CI789_RS12595	COG0647	UMP catabolic process
CI789_RS12600	COG0367	asparagine synthase
CI789_RS12635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CI789_RS12645	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CI789_RS12650	COG1702	phosphate starvation-inducible protein PhoH
CI789_RS12655	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CI789_RS12660	COG4535	Mg2 and Co2 transporter CorC
CI789_RS12665	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CI789_RS12675	COG0765	amino acid transport
CI789_RS12680	COG0765	amino acid transport
CI789_RS12685	COG1126	abc transporter atp-binding protein
CI789_RS12690	COG2888	peptidyl-tyrosine sulfation
CI789_RS12695	COG0495	leucyl-tRNA aminoacylation
CI789_RS12700	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
CI789_RS12705	COG1466	dna polymerase III delta subunit
CI789_RS12715	COG0799	negative regulation of ribosome biogenesis
CI789_RS12720	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CI789_RS12725	COG0768	penicillin binding
CI789_RS12730	COG0772	Belongs to the SEDS family
CI789_RS12735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CI789_RS12740	COG1686	Belongs to the peptidase S11 family
CI789_RS12745	COG2921	Belongs to the UPF0250 family
CI789_RS12750	COG0321	lipoyl(octanoyl) transferase activity
CI789_RS12755	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CI789_RS12760	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CI789_RS12765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CI789_RS12785	COG2610	gluconate transmembrane transporter activity
CI789_RS12790	COG3622	Belongs to the hyi family
CI789_RS12795	COG0235	Class ii aldolase
CI789_RS12800	COG3395	kinase activity
CI789_RS12805	COG2084	Dehydrogenase
CI789_RS12810	COG1349	DNA-binding transcription factor activity
CI789_RS12825	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CI789_RS12835	COG1271	oxidase subunit
CI789_RS12840	COG1294	oxidase, subunit
CI789_RS12860	COG0390	transport system, permease component
CI789_RS12865	COG4619	ABC transporter
CI789_RS12870	COG2076	Multidrug Resistance protein
CI789_RS12875	COG2076	Multidrug Resistance protein
CI789_RS12880	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CI789_RS12885	COG0726	polysaccharide deacetylase
CI789_RS12890	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS12890	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CI789_RS12900	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CI789_RS12910	COG4993	Dehydrogenase
CI789_RS12915	COG4772	TonB-dependent receptor
CI789_RS12925	COG1454	alcohol dehydrogenase
CI789_RS12930	COG0840	transmembrane signaling receptor activity
CI789_RS12935	COG4172	Belongs to the ABC transporter superfamily
CI789_RS12940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS12965	COG1764	response to oxidative stress
CI789_RS12990	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CI789_RS13000	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS13010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CI789_RS13010	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CI789_RS13015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CI789_RS13040	COG0583	DNA-binding transcription factor activity
CI789_RS13045	COG0666	response to abiotic stimulus
CI789_RS13060	COG4232	protein-disulfide reductase activity
CI789_RS13070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CI789_RS13085	COG2203	Gaf domain
CI789_RS13085	COG2199	diguanylate cyclase activity
CI789_RS13145	COG3121	Chaperone
CI789_RS13150	COG3188	usher protein
CI789_RS13190	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CI789_RS13195	COG2501	S4 domain
CI789_RS13200	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CI789_RS13205	COG0215	cysteine-tRNA ligase activity
CI789_RS13210	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CI789_RS13220	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CI789_RS13225	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CI789_RS13230	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CI789_RS13235	COG4181	ATPase activity
CI789_RS13240	COG2755	lipolytic protein G-D-S-L family
CI789_RS13245	COG0300	oxidoreductase activity
CI789_RS13250	COG3118	belongs to the thioredoxin family
CI789_RS13275	COG0330	HflC and HflK could
CI789_RS13280	COG1585	Membrane protein implicated in regulation of membrane protease activity
CI789_RS13285	COG0789	Transcriptional regulator
CI789_RS13295	COG3735	TraB family
CI789_RS13300	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CI789_RS13305	COG0583	DNA-binding transcription factor activity
CI789_RS13315	COG0737	Belongs to the 5'-nucleotidase family
CI789_RS13320	COG2223	nitrite transmembrane transporter activity
CI789_RS13325	COG4651	solute:proton antiporter activity
CI789_RS13325	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CI789_RS13330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS13335	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CI789_RS13340	COG0563	adenylate kinase activity
CI789_RS13365	COG0583	DNA-binding transcription factor activity
CI789_RS13370	COG0326	Molecular chaperone. Has ATPase activity
CI789_RS13375	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CI789_RS13380	COG1335	isochorismatase
CI789_RS13390	COG0583	DNA-binding transcription factor activity
CI789_RS13395	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CI789_RS13410	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CI789_RS13415	COG2832	Protein of unknown function (DUF454)
CI789_RS13435	COG1309	transcriptional regulator
CI789_RS13440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CI789_RS13445	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CI789_RS13450	COG0254	rRNA binding
CI789_RS13455	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CI789_RS13465	COG0803	Belongs to the bacterial solute-binding protein 9 family
CI789_RS13470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CI789_RS13475	COG1121	(ABC) transporter
CI789_RS13500	COG3695	enzyme binding
CI789_RS13505	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CI789_RS13510	COG1946	Acyl-CoA thioesterase
CI789_RS13515	COG0004	ammonium transporteR
CI789_RS13520	COG0347	Belongs to the P(II) protein family
CI789_RS13525	COG1132	(ABC) transporter
CI789_RS13530	COG1132	(ABC) transporter
CI789_RS13535	COG1522	sequence-specific DNA binding
CI789_RS13550	COG4533	DNA binding
CI789_RS13560	COG1280	lysine exporter protein (LysE YggA)
CI789_RS13570	COG2207	Transcriptional regulator
CI789_RS13575	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CI789_RS13580	COG0824	Thioesterase
CI789_RS13585	COG1555	photosystem II stabilization
CI789_RS13590	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CI789_RS13595	COG0776	regulation of translation
CI789_RS13610	COG0740	serine-type endopeptidase activity
CI789_RS13620	COG0740	serine-type endopeptidase activity
CI789_RS13625	COG0544	peptidyl-prolyl cis-trans isomerase activity
CI789_RS13630	COG0271	Belongs to the BolA IbaG family
CI789_RS13635	COG3056	Lipoprotein
CI789_RS13645	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CI789_RS13650	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CI789_RS13655	COG1845	cytochrome c oxidase, subunit III
CI789_RS13660	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CI789_RS13665	COG0109	protoheme IX farnesyltransferase activity
CI789_RS13670	COG2814	Major facilitator Superfamily
CI789_RS13675	COG1666	GTP binding
CI789_RS13680	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CI789_RS13690	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CI789_RS13690	COG0301	tRNA thio-modification
CI789_RS13700	COG0142	geranyltranstransferase activity
CI789_RS13705	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CI789_RS13710	COG0667	Aldo Keto reductase
CI789_RS13715	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CI789_RS13720	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CI789_RS13725	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CI789_RS13730	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CI789_RS13735	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CI789_RS13735	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CI789_RS13740	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CI789_RS13750	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CI789_RS13755	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CI789_RS13760	COG1862	Preprotein translocase
CI789_RS13765	COG0343	queuine tRNA-ribosyltransferase activity
CI789_RS13770	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CI789_RS13775	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
CI789_RS13780	COG0450	alkyl hydroperoxide reductase
CI789_RS13815	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CI789_RS13825	COG5002	protein histidine kinase activity
CI789_RS13830	COG0745	RESPONSE REGULATOR receiver
CI789_RS13835	COG0420	3'-5' exonuclease activity
CI789_RS13840	COG0419	ATPase involved in DNA repair
CI789_RS13875	COG1940	carbohydrate kinase activity
CI789_RS13880	COG2974	May be involved in recombination
CI789_RS13885	COG3123	guanosine phosphorylase activity
CI789_RS13895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CI789_RS13900	COG3416	Protein conserved in bacteria
CI789_RS13905	COG1671	Belongs to the UPF0178 family
CI789_RS13910	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CI789_RS13930	COG3250	beta-galactosidase activity
CI789_RS13940	COG1278	Cold shock
CI789_RS13955	COG3118	belongs to the thioredoxin family
CI789_RS13970	COG0747	negative chemotaxis
CI789_RS13975	COG0601	transmembrane transport
CI789_RS13980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS13985	COG4172	Belongs to the ABC transporter superfamily
CI789_RS13990	COG4608	Belongs to the ABC transporter superfamily
CI789_RS14055	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CI789_RS14070	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CI789_RS14075	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CI789_RS14080	COG0124	histidyl-tRNA synthetase
CI789_RS14085	COG0531	amino acid
CI789_RS14100	COG1280	lysine exporter protein (LysE YggA)
CI789_RS14105	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CI789_RS14110	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CI789_RS14125	COG1073	alpha beta
CI789_RS14130	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CI789_RS14135	COG2195	Cleaves the N-terminal amino acid of tripeptides
CI789_RS14145	COG3034	peptidoglycan biosynthetic process
CI789_RS14150	COG0121	glutamine amidotransferase
CI789_RS14155	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CI789_RS14165	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CI789_RS14175	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
CI789_RS14180	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
CI789_RS14190	COG0436	Aminotransferase
CI789_RS14195	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CI789_RS14220	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CI789_RS14235	COG0765	amino acid transport
CI789_RS14275	COG3423	Transcriptional regulator
CI789_RS14315	COG0328	RNA-DNA hybrid ribonuclease activity
CI789_RS14320	COG2226	methyltransferase
CI789_RS14325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CI789_RS14330	COG0741	lytic transglycosylase activity
CI789_RS14330	COG1388	LysM domain
CI789_RS14335	COG2226	methyltransferase
CI789_RS14340	COG3021	interspecies interaction between organisms
CI789_RS14375	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CI789_RS14385	COG2011	ABC-type metal ion transport system permease component
CI789_RS14405	COG1720	tRNA m6t6A37 methyltransferase activity
CI789_RS14410	COG0442	prolyl-tRNA aminoacylation
CI789_RS14415	COG0501	Belongs to the peptidase M48B family
CI789_RS14430	COG4681	YaeQ
CI789_RS14440	COG4568	rho-dependent transcription termination
CI789_RS14450	COG0037	tRNA processing
CI789_RS14455	COG0346	lactoylglutathione lyase activity
CI789_RS14460	COG1982	Orn Lys Arg decarboxylase major
CI789_RS14465	COG0825	malonyl-CoA metabolic process
CI789_RS14475	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CI789_RS14480	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CI789_RS14485	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CI789_RS14490	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CI789_RS14495	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CI789_RS14500	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CI789_RS14505	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS14515	COG0575	Belongs to the CDS family
CI789_RS14520	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CI789_RS14525	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CI789_RS14530	COG0233	cytoplasmic translational termination
CI789_RS14535	COG0528	UMP kinase activity
CI789_RS14540	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CI789_RS14545	COG0052	Belongs to the universal ribosomal protein uS2 family
CI789_RS14555	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CI789_RS14560	COG2171	N-acyltransferase activity
CI789_RS14570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CI789_RS14580	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CI789_RS14585	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS14595	COG0316	Belongs to the HesB IscA family
CI789_RS14605	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CI789_RS14615	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS14620	COG1120	ATPase activity
CI789_RS14625	COG4774	siderophore transport
CI789_RS14635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CI789_RS14640	COG1643	Atp-dependent helicase
CI789_RS14645	COG1489	DNA binding
CI789_RS14665	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CI789_RS14670	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CI789_RS14675	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CI789_RS14680	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CI789_RS14685	COG0842	Transport permease protein
CI789_RS14690	COG1131	(ABC) transporter
CI789_RS14695	COG0288	reversible hydration of carbon dioxide
CI789_RS14720	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CI789_RS14725	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CI789_RS14730	COG3112	Uncharacterised protein family (UPF0231)
CI789_RS14745	COG1278	Cold shock
CI789_RS14750	COG1024	Enoyl-CoA hydratase
CI789_RS14760	COG0318	PFAM AMP-dependent synthetase and ligase
CI789_RS14775	COG1268	BioY protein
CI789_RS14780	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CI789_RS14785	COG1122	ATPase activity
CI789_RS14790	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS14795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CI789_RS14805	COG0508	dehydrogenase complex catalyzes the overall conversion of
CI789_RS14810	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CI789_RS14825	COG2211	Major facilitator Superfamily
CI789_RS14830	COG3940	Belongs to the glycosyl hydrolase 43 family
CI789_RS14835	COG3725	Membrane protein required for beta-lactamase induction
CI789_RS14845	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CI789_RS14860	COG0583	DNA-binding transcription factor activity
CI789_RS14870	COG1942	4-Oxalocrotonate Tautomerase
CI789_RS14885	COG4969	Belongs to the N-Me-Phe pilin family
CI789_RS14890	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CI789_RS14895	COG1459	type II secretion system
CI789_RS14900	COG0516	GMP reductase activity
CI789_RS14905	COG0237	dephospho-CoA kinase activity
CI789_RS14910	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CI789_RS14915	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CI789_RS14920	COG0494	nUDIX hydrolase
CI789_RS14925	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CI789_RS14930	COG0653	protein targeting
CI789_RS14945	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CI789_RS14950	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CI789_RS14955	COG0849	cell division
CI789_RS14960	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CI789_RS14965	COG1181	Belongs to the D-alanine--D-alanine ligase family
CI789_RS14970	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CI789_RS14975	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CI789_RS14980	COG0772	Belongs to the SEDS family
CI789_RS14990	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CI789_RS14995	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CI789_RS15000	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CI789_RS15005	COG0768	penicillin binding
CI789_RS15010	COG3116	cell division
CI789_RS15015	COG0275	rRNA processing
CI789_RS15020	COG2001	Belongs to the MraZ family
CI789_RS15035	COG0028	Belongs to the TPP enzyme family
CI789_RS15050	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CI789_RS15055	COG0473	3-isopropylmalate dehydrogenase activity
CI789_RS15065	COG0066	3-isopropylmalate dehydratase activity
CI789_RS15070	COG2814	Major facilitator Superfamily
CI789_RS15080	COG4143	(ABC) transporter
CI789_RS15085	COG1178	ABC-type Fe3 transport system permease component
CI789_RS15090	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
CI789_RS15095	COG0586	Pfam SNARE associated Golgi protein
CI789_RS15100	COG0417	DNA replication proofreading
CI789_RS15105	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CI789_RS15110	COG0564	pseudouridine synthase activity
CI789_RS15115	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CI789_RS15130	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CI789_RS15135	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CI789_RS15140	COG2967	ApaG domain
CI789_RS15145	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CI789_RS15150	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CI789_RS15155	COG1280	lysine exporter protein (LysE YggA)
CI789_RS15180	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CI789_RS15190	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CI789_RS15195	COG1047	Peptidyl-prolyl cis-trans
CI789_RS15200	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CI789_RS15205	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CI789_RS15210	COG0196	riboflavin kinase activity
CI789_RS15215	COG0268	Binds directly to 16S ribosomal RNA
CI789_RS15220	COG0583	DNA-binding transcription factor activity
CI789_RS15225	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CI789_RS15230	COG0484	heat shock protein binding
CI789_RS15235	COG0443	Heat shock 70 kDa protein
CI789_RS15245	COG0521	Mo-molybdopterin cofactor biosynthetic process
CI789_RS15255	COG3121	Chaperone
CI789_RS15260	COG3188	usher protein
CI789_RS15270	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CI789_RS15275	COG3022	response to hydroperoxide
CI789_RS15295	COG0083	homoserine kinase activity
CI789_RS15310	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CI789_RS15315	COG0745	RESPONSE REGULATOR receiver
CI789_RS15320	COG3045	CreA protein
CI789_RS15325	COG3708	Transcriptional regulator
CI789_RS15325	COG2207	Transcriptional regulator
CI789_RS15330	COG0406	alpha-ribazole phosphatase activity
CI789_RS15335	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CI789_RS15345	COG0741	lytic transglycosylase activity
CI789_RS15360	COG0439	Biotin carboxylase
CI789_RS15365	COG1802	Transcriptional regulator
CI789_RS15395	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CI789_RS15405	COG1349	DNA-binding transcription factor activity
CI789_RS15410	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CI789_RS15420	COG0583	DNA-binding transcription factor activity
CI789_RS15425	COG0604	alcohol dehydrogenase
CI789_RS15440	COG0560	Phosphoserine phosphatase
CI789_RS15445	COG3726	membrane protein affecting hemolysin expression
CI789_RS15455	COG0813	purine-nucleoside phosphorylase activity
CI789_RS15460	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CI789_RS15470	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CI789_RS15475	COG0084	hydrolase, TatD family'
CI789_RS15480	COG4667	esterase of the alpha-beta hydrolase superfamily
CI789_RS15490	COG2823	Periplasmic or secreted lipoprotein
CI789_RS15495	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CI789_RS15500	COG2818	Glycosylase
CI789_RS15505	COG0625	glutathione transferase activity
CI789_RS15510	COG1011	Hydrolase
CI789_RS15520	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CI789_RS15525	COG2813	Specifically methylates the guanine in position
CI789_RS15550	COG3706	GGDEF domain
CI789_RS15555	COG0442	prolyl-tRNA aminoacylation
CI789_RS15560	COG2814	Major facilitator Superfamily
CI789_RS15590	COG3210	domain, Protein
CI789_RS15595	COG2994	toxin metabolic process
CI789_RS15600	COG2831	hemolysin activation secretion protein
CI789_RS15620	COG1609	Transcriptional regulator
CI789_RS15625	COG0477	Major facilitator Superfamily
CI789_RS15650	COG0667	Aldo Keto reductase
CI789_RS15655	COG1309	transcriptional regulator
CI789_RS15665	COG0535	radical SAM domain protein
CI789_RS15675	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
CI789_RS15680	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CI789_RS15740	COG5301	cellulose 1,4-beta-cellobiosidase activity
CI789_RS15805	COG0659	secondary active sulfate transmembrane transporter activity
CI789_RS15810	COG0288	reversible hydration of carbon dioxide
CI789_RS15815	COG1609	Transcriptional regulator
CI789_RS15820	COG2610	gluconate transmembrane transporter activity
CI789_RS15825	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS15830	COG1063	alcohol dehydrogenase
CI789_RS15835	COG0446	pyridine nucleotide-disulphide oxidoreductase
CI789_RS15835	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS15840	COG3477	response to acidic pH
CI789_RS15845	COG1496	oxidoreductase activity
CI789_RS15850	COG2813	Specifically methylates the guanine in position
CI789_RS15855	COG1451	nucleotide metabolic process
CI789_RS15865	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CI789_RS15875	COG0038	chloride channel
CI789_RS15880	COG0673	inositol 2-dehydrogenase activity
CI789_RS15885	COG0861	Integral membrane protein TerC family
CI789_RS15890	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CI789_RS15895	COG2721	sulfolactate sulfo-lyase activity
CI789_RS15900	COG0246	Mannitol dehydrogenase
CI789_RS15910	COG2271	Major facilitator Superfamily
CI789_RS15920	COG0586	Pfam SNARE associated Golgi protein
CI789_RS15925	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CI789_RS15930	COG1422	Protein of unknown function (DUF1090)
CI789_RS15935	COG4575	ribosome binding
CI789_RS15940	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CI789_RS15950	COG2259	Doxx family
CI789_RS15955	COG0435	Glutathione S-transferase
CI789_RS15960	COG0583	DNA-binding transcription factor activity
CI789_RS15965	COG1741	Belongs to the pirin family
CI789_RS15975	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CI789_RS15980	COG3107	peptidoglycan biosynthetic process
CI789_RS15985	COG0792	nuclease activity
CI789_RS15990	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CI789_RS15995	COG2823	Periplasmic or secreted lipoprotein
CI789_RS16000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS16000	COG3711	transcriptional antiterminator
CI789_RS16015	COG3964	amidohydrolase
CI789_RS16050	COG0312	modulator of DNA gyrase
CI789_RS16055	COG3028	Belongs to the UPF0307 family
CI789_RS16060	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CI789_RS16065	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CI789_RS16080	COG0840	transmembrane signaling receptor activity
CI789_RS16095	COG2105	PFAM AIG2 family protein
CI789_RS16100	COG2911	Protein conserved in bacteria
CI789_RS16105	COG0729	surface antigen
CI789_RS16110	COG1253	flavin adenine dinucleotide binding
CI789_RS16120	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CI789_RS16125	COG1218	3'(2'),5'-bisphosphate nucleotidase
CI789_RS16135	COG0545	Peptidyl-prolyl cis-trans isomerase
CI789_RS16140	COG3061	Opacity-associated protein A
CI789_RS16145	COG0359	binds to the 23S rRNA
CI789_RS16150	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CI789_RS16155	COG2965	DNA replication, synthesis of RNA primer
CI789_RS16160	COG0360	Binds together with S18 to 16S ribosomal RNA
CI789_RS16170	COG0840	transmembrane signaling receptor activity
CI789_RS16175	COG3650	response to hydrogen peroxide
CI789_RS16185	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CI789_RS16190	COG0557	exoribonuclease II activity
CI789_RS16200	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CI789_RS16205	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CI789_RS16210	COG0330	HflC and HflK could
CI789_RS16215	COG0330	HflC and HflK could
CI789_RS16220	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CI789_RS16230	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CI789_RS16235	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CI789_RS16245	COG0802	atpase or kinase
CI789_RS16250	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CI789_RS16250	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CI789_RS16280	COG0590	tRNA wobble adenosine to inosine editing
CI789_RS16285	COG0583	DNA-binding transcription factor activity
CI789_RS16300	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CI789_RS16305	COG1162	GTPase activity
CI789_RS16310	COG0688	phosphatidylethanolamine metabolic process
CI789_RS16315	COG1511	domain protein
CI789_RS16315	COG3264	Mechanosensitive ion channel
CI789_RS16320	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CI789_RS16325	COG1053	succinate dehydrogenase
CI789_RS16330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CI789_RS16335	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
CI789_RS16345	COG3040	lipid binding
CI789_RS16355	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CI789_RS16360	COG1509	lysine 2,3-aminomutase activity
CI789_RS16380	COG3121	Chaperone
CI789_RS16395	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CI789_RS16400	COG3030	protein affecting phage T7 exclusion by the F plasmid
CI789_RS16405	COG1027	Aspartate ammonia-lyase
CI789_RS16410	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CI789_RS16420	COG1309	transcriptional regulator
CI789_RS16550	COG2885	chlorophyll binding
CI789_RS16595	COG4774	siderophore transport
CI789_RS16600	COG0583	DNA-binding transcription factor activity
CI789_RS16605	COG2814	Major facilitator Superfamily
CI789_RS16620	COG1349	DNA-binding transcription factor activity
CI789_RS16625	COG0561	phosphatase activity
CI789_RS16630	COG5383	Protein conserved in bacteria
CI789_RS16640	COG2382	esterase
CI789_RS16645	COG1051	belongs to the nudix hydrolase family
CI789_RS16660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS16670	COG1280	lysine exporter protein (LysE YggA)
CI789_RS16680	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CI789_RS16685	COG0583	DNA-binding transcription factor activity
CI789_RS16700	COG0583	DNA-binding transcription factor activity
CI789_RS16705	COG1414	Transcriptional regulator
CI789_RS16710	COG1129	ABC transporter
CI789_RS16715	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS16735	COG2731	YhcH YjgK YiaL family protein
CI789_RS16745	COG1070	Carbohydrate kinase
CI789_RS16750	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CI789_RS16755	COG3623	hexulose-6-phosphate isomerase
CI789_RS16760	COG0235	Class ii aldolase
CI789_RS16780	COG5001	Diguanylate cyclase
CI789_RS16780	COG3300	MHYT domain
CI789_RS16785	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CI789_RS16800	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CI789_RS16805	COG4977	sequence-specific DNA binding
CI789_RS16805	COG1917	Cupin 2, conserved barrel domain protein
CI789_RS16810	COG0840	transmembrane signaling receptor activity
CI789_RS16815	COG1301	dicarboxylic acid transport
CI789_RS16825	COG3162	membrane
CI789_RS16830	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CI789_RS16840	COG1346	cytolysis
CI789_RS16850	COG0583	DNA-binding transcription factor activity
CI789_RS16855	COG0025	NhaP-type Na H and K H
CI789_RS16860	COG2252	PERMEase
CI789_RS16870	COG0789	Transcriptional regulator
CI789_RS16880	COG2199	diguanylate cyclase activity
CI789_RS16910	COG0697	spore germination
CI789_RS16915	COG2207	Transcriptional regulator
CI789_RS16920	COG0625	glutathione transferase activity
CI789_RS16925	COG2990	Protein conserved in bacteria
CI789_RS16935	COG0277	FAD linked oxidase domain protein
CI789_RS16940	COG1113	amino acid transport
CI789_RS16975	COG3210	domain, Protein
CI789_RS16985	COG3210	domain, Protein
CI789_RS17005	COG3210	domain, Protein
CI789_RS17065	COG2831	hemolysin activation secretion protein
CI789_RS17070	COG0629	single-stranded DNA binding
CI789_RS17080	COG1064	alcohol dehydrogenase
CI789_RS17090	COG0159	tryptophan synthase activity
CI789_RS17100	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS17115	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS17135	COG2315	Protein conserved in bacteria
CI789_RS17145	COG1448	Aminotransferase
CI789_RS17155	COG1522	sequence-specific DNA binding
CI789_RS17175	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CI789_RS17185	COG0735	belongs to the Fur family
CI789_RS17190	COG3237	CsbD-like
CI789_RS17195	COG0534	Mate efflux family protein
CI789_RS17200	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CI789_RS17205	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CI789_RS17220	COG3161	chorismate lyase activity
CI789_RS17225	COG3223	Belongs to the PsiE family
CI789_RS17230	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CI789_RS17250	COG0166	Belongs to the GPI family
CI789_RS17255	COG0527	aspartate kinase activity
CI789_RS17275	COG0646	methionine synthase
CI789_RS17275	COG1410	methionine synthase
CI789_RS17280	COG1414	Transcriptional regulator
CI789_RS17295	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CI789_RS17300	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CI789_RS17335	COG0138	bifunctional purine biosynthesis protein purh
CI789_RS17340	COG0151	Belongs to the GarS family
CI789_RS17360	COG1515	deoxyribonuclease V activity
CI789_RS17365	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CI789_RS17375	COG2816	NAD+ diphosphatase activity
CI789_RS17380	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CI789_RS17385	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CI789_RS17395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CI789_RS17420	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CI789_RS17425	COG0085	RNA polymerase activity
CI789_RS17430	COG0222	ribosome binding
CI789_RS17435	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CI789_RS17440	COG0081	regulation of translation
CI789_RS17445	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CI789_RS17450	COG0250	Participates in transcription elongation, termination and antitermination
CI789_RS17460	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CI789_RS17485	COG1072	(Pantothenic acid kinase))
CI789_RS17525	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CI789_RS17535	COG1739	Uncharacterized protein family UPF0029
CI789_RS17540	COG0006	proline dipeptidase activity
CI789_RS17550	COG0183	Belongs to the thiolase family
CI789_RS17560	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CI789_RS17570	COG0084	hydrolase, TatD family'
CI789_RS17575	COG0805	protein transport
CI789_RS17590	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CI789_RS17600	COG2226	methyltransferase
CI789_RS17605	COG1322	Protein conserved in bacteria
CI789_RS17615	COG0412	Dienelactone hydrolase
CI789_RS17620	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CI789_RS17625	COG0583	DNA-binding transcription factor activity
CI789_RS17630	COG4807	Protein conserved in bacteria
CI789_RS17635	COG2271	Major facilitator Superfamily
CI789_RS17640	COG0584	glycerophosphoryl diester phosphodiesterase
CI789_RS17645	COG0561	phosphatase activity
CI789_RS17650	COG2267	carboxylic ester hydrolase activity
CI789_RS17655	COG1280	lysine exporter protein (LysE YggA)
CI789_RS17665	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CI789_RS17670	COG2050	protein possibly involved in aromatic compounds catabolism
CI789_RS17675	COG2962	Rard protein
CI789_RS17685	COG0210	DNA helicase
CI789_RS17690	COG1011	Hydrolase
CI789_RS17695	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CI789_RS17700	COG3159	Protein conserved in bacteria
CI789_RS17705	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CI789_RS17720	COG0181	hydroxymethylbilane synthase activity
CI789_RS17730	COG2959	enzyme of heme biosynthesis
CI789_RS17735	COG3071	HemY protein
CI789_RS17745	COG2249	NAD(P)H dehydrogenase (quinone) activity
CI789_RS17785	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CI789_RS17795	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CI789_RS17800	COG2244	polysaccharide biosynthetic process
CI789_RS17805	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CI789_RS17810	COG0456	acetyltransferase
CI789_RS17815	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CI789_RS17820	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CI789_RS17825	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CI789_RS17830	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CI789_RS17835	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CI789_RS17840	COG3118	belongs to the thioredoxin family
CI789_RS17845	COG0513	Belongs to the DEAD box helicase family
CI789_RS17850	COG0248	Ppx GppA phosphatase
CI789_RS17875	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CI789_RS17885	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CI789_RS17890	COG0129	dihydroxy-acid dehydratase activity
CI789_RS17900	COG3978	acetolactate synthase activity
CI789_RS17920	COG3085	chromosome segregation
CI789_RS17925	COG0583	DNA-binding transcription factor activity
CI789_RS17960	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CI789_RS17965	COG4206	TonB-dependent receptor
CI789_RS17970	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CI789_RS17980	COG1309	transcriptional regulator
CI789_RS17985	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CI789_RS17995	COG0678	peroxiredoxin activity
CI789_RS17995	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CI789_RS18000	COG0165	Argininosuccinate lyase
CI789_RS18005	COG0137	argininosuccinate synthase activity
CI789_RS18010	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CI789_RS18015	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CI789_RS18020	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CI789_RS18030	COG0460	homoserine dehydrogenase
CI789_RS18030	COG0527	aspartate kinase activity
CI789_RS18035	COG0626	cystathionine gamma-synthase activity
CI789_RS18045	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
CI789_RS18055	COG0254	rRNA binding
CI789_RS18060	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CI789_RS18065	COG1609	Transcriptional regulator
CI789_RS18070	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CI789_RS18075	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CI789_RS18080	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CI789_RS18085	COG1575	Belongs to the MenA family. Type 1 subfamily
CI789_RS18090	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CI789_RS18095	COG3074	FtsZ-dependent cytokinesis
CI789_RS18100	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CI789_RS18110	COG1494	fructose-1,6-bisphosphatase
CI789_RS18115	COG2814	Major facilitator Superfamily
CI789_RS18130	COG3152	Membrane
CI789_RS18140	COG0149	triose-phosphate isomerase activity
CI789_RS18150	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CI789_RS18165	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CI789_RS18170	COG0625	glutathione transferase activity
CI789_RS18180	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS18185	COG0583	DNA-binding transcription factor activity
CI789_RS18190	COG1295	ribonuclease BN
CI789_RS18205	COG0205	6-phosphofructokinase activity
CI789_RS18215	COG3678	ATP-independent chaperone mediated protein folding
CI789_RS18220	COG0745	RESPONSE REGULATOR receiver
CI789_RS18225	COG2205	protein histidine kinase activity
CI789_RS18240	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CI789_RS18245	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CI789_RS18250	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CI789_RS18255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CI789_RS18260	COG4942	peptidase
CI789_RS18265	COG2861	carbohydrate metabolic process
CI789_RS18270	COG1063	alcohol dehydrogenase
CI789_RS18275	COG0156	8-amino-7-oxononanoate synthase activity
CI789_RS18280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CI789_RS18285	COG0859	PFAM glycosyl transferase family 9
CI789_RS18290	COG0859	PFAM glycosyl transferase family 9
CI789_RS18295	COG0438	transferase activity, transferring glycosyl groups
CI789_RS18305	COG1216	Glycosyl transferase, family 2
CI789_RS18305	COG1442	glycosyl transferase family 8
CI789_RS18320	COG0859	PFAM glycosyl transferase family 9
CI789_RS18325	COG0438	transferase activity, transferring glycosyl groups
CI789_RS18330	COG0438	transferase activity, transferring glycosyl groups
CI789_RS18335	COG0859	PFAM glycosyl transferase family 9
CI789_RS18340	COG1216	Glycosyl transferase, family 2
CI789_RS18345	COG1519	Transferase
CI789_RS18355	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CI789_RS18360	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CI789_RS18375	COG2003	Belongs to the UPF0758 family
CI789_RS18380	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CI789_RS18385	COG0756	dUTP diphosphatase activity
CI789_RS18390	COG1309	transcriptional regulator
CI789_RS18395	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CI789_RS18400	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CI789_RS18405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CI789_RS18415	COG1561	YicC-like family, N-terminal region
CI789_RS18420	COG0583	DNA-binding transcription factor activity
CI789_RS18465	COG0667	Aldo Keto reductase
CI789_RS18470	COG2824	Alkylphosphonate utilization operon protein PhnA
CI789_RS18480	COG2197	response regulator
CI789_RS18485	COG2860	membrane
CI789_RS18495	COG0194	GDP metabolic process
CI789_RS18500	COG1758	RNA polymerase activity
CI789_RS18505	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CI789_RS18510	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CI789_RS18515	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CI789_RS18525	COG2233	PERMEase
CI789_RS18535	COG2982	Protein involved in outer membrane biogenesis
CI789_RS18540	COG1187	pseudouridine synthase activity
CI789_RS18545	COG0456	acetyltransferase
CI789_RS18550	COG1490	D-aminoacyl-tRNA deacylase activity
CI789_RS18560	COG1011	Hydrolase
CI789_RS18575	COG3852	Histidine kinase
CI789_RS18590	COG3078	GTPase activator activity
CI789_RS18615	COG3084	Protein conserved in bacteria
CI789_RS18650	COG1609	Transcriptional regulator
CI789_RS18655	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS18660	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS18665	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS18670	COG1129	ABC transporter
CI789_RS18700	COG3111	PFAM Bacterial OB fold (BOF) protein
CI789_RS18705	COG0745	RESPONSE REGULATOR receiver
CI789_RS18710	COG0642	Histidine kinase
CI789_RS18715	COG3158	transport of potassium into the cell
CI789_RS18725	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CI789_RS18730	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CI789_RS18735	COG1522	sequence-specific DNA binding
CI789_RS18745	COG0716	FMN binding
CI789_RS18760	COG0357	Ribosomal RNA small subunit methyltransferase G
CI789_RS18765	COG3312	ion transport
CI789_RS18770	COG0356	it plays a direct role in the translocation of protons across the membrane
CI789_RS18780	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CI789_RS18785	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CI789_RS18790	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CI789_RS18795	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CI789_RS18800	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CI789_RS18805	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CI789_RS18810	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CI789_RS18835	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CI789_RS18840	COG0573	inorganic phosphate transmembrane transporter activity
CI789_RS18845	COG0581	inorganic phosphate transmembrane transporter activity
CI789_RS18850	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CI789_RS18855	COG0704	Plays a role in the regulation of phosphate uptake
CI789_RS18860	COG2814	Major facilitator Superfamily
CI789_RS18865	COG0250	Participates in transcription elongation, termination and antitermination
CI789_RS18875	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CI789_RS18880	COG2252	PERMEase
CI789_RS18890	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CI789_RS18895	COG0706	membrane insertase activity
CI789_RS18900	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CI789_RS18905	COG0594	ribonuclease P activity
CI789_RS18910	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CI789_RS18915	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CI789_RS18920	COG0592	DNA-directed DNA polymerase activity
CI789_RS18925	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CI789_RS18930	COG0187	DNA topoisomerase II activity
CI789_RS18935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS18940	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CI789_RS18950	COG2271	Major facilitator Superfamily
CI789_RS18955	COG0561	phosphatase activity
CI789_RS18960	COG0823	Involved in the tonB-independent uptake of proteins
CI789_RS18965	COG5645	(Lipo)protein
CI789_RS18975	COG3977	Valine--pyruvate aminotransferase
CI789_RS18985	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CI789_RS18990	COG2814	Major facilitator Superfamily
CI789_RS18995	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS19005	COG1609	Transcriptional regulator
CI789_RS19015	COG2885	chlorophyll binding
CI789_RS19020	COG2818	Glycosylase
CI789_RS19035	COG0625	glutathione transferase activity
CI789_RS19045	COG2864	formate dehydrogenase
CI789_RS19050	COG0437	4 iron, 4 sulfur cluster binding
CI789_RS19065	COG1349	DNA-binding transcription factor activity
CI789_RS19070	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CI789_RS19075	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CI789_RS19080	COG1129	ABC transporter
CI789_RS19085	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS19100	COG0745	RESPONSE REGULATOR receiver
CI789_RS19130	COG3722	fumarate hydratase activity
CI789_RS19140	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS19140	COG2213	PTS system mannitol-specific
CI789_RS19155	COG2944	sequence-specific DNA binding
CI789_RS19160	COG0751	glycine-tRNA ligase activity
CI789_RS19165	COG0752	glycyl-tRNA synthetase alpha subunit
CI789_RS19215	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS19230	COG0823	Involved in the tonB-independent uptake of proteins
CI789_RS19255	COG0395	ABC-type sugar transport system, permease component
CI789_RS19260	COG1175	transmembrane transport
CI789_RS19265	COG1653	transport
CI789_RS19270	COG3842	ATPase activity
CI789_RS19295	COG1846	Transcriptional regulator
CI789_RS19300	COG1764	response to oxidative stress
CI789_RS19305	COG2194	sulfuric ester hydrolase activity
CI789_RS19310	COG0747	negative chemotaxis
CI789_RS19315	COG0601	transmembrane transport
CI789_RS19320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CI789_RS19325	COG0444	Belongs to the ABC transporter superfamily
CI789_RS19330	COG4608	Belongs to the ABC transporter superfamily
CI789_RS19340	COG0489	protein tyrosine kinase activity
CI789_RS19345	COG1215	transferase activity, transferring glycosyl groups
CI789_RS19350	COG1215	transferase activity, transferring glycosyl groups
CI789_RS19365	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CI789_RS19370	COG2194	sulfuric ester hydrolase activity
CI789_RS19395	COG1215	transferase activity, transferring glycosyl groups
CI789_RS19400	COG1215	transferase activity, transferring glycosyl groups
CI789_RS19405	COG0457	Tetratricopeptide repeat
CI789_RS19405	COG3118	belongs to the thioredoxin family
CI789_RS19410	COG2200	EAL domain
CI789_RS19410	COG2199	diguanylate cyclase activity
CI789_RS19415	COG1301	dicarboxylic acid transport
CI789_RS19435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS19440	COG2200	EAL domain
CI789_RS19450	COG0477	Major facilitator Superfamily
CI789_RS19475	COG1971	Probably functions as a manganese efflux pump
CI789_RS19505	COG0583	DNA-binding transcription factor activity
CI789_RS19510	COG0673	inositol 2-dehydrogenase activity
CI789_RS19530	COG3708	Transcriptional regulator
CI789_RS19530	COG2207	Transcriptional regulator
CI789_RS19560	COG0583	DNA-binding transcription factor activity
CI789_RS19570	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CI789_RS19575	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CI789_RS19580	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CI789_RS19585	COG2205	protein histidine kinase activity
CI789_RS19590	COG0400	carboxylic ester hydrolase activity
CI789_RS19595	COG2862	Uncharacterized protein family, UPF0114
CI789_RS19605	COG2207	Transcriptional regulator
CI789_RS19610	COG0583	DNA-binding transcription factor activity
CI789_RS19625	COG1132	(ABC) transporter
CI789_RS19630	COG0861	Integral membrane protein TerC family
CI789_RS19640	COG0673	inositol 2-dehydrogenase activity
CI789_RS19665	COG1335	isochorismatase
CI789_RS19680	COG1846	Transcriptional regulator
CI789_RS19685	COG0697	spore germination
CI789_RS19690	COG0583	DNA-binding transcription factor activity
CI789_RS19695	COG1335	isochorismatase
CI789_RS19735	COG1609	Transcriptional regulator
CI789_RS19745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CI789_RS19750	COG3541	Predicted nucleotidyltransferase
CI789_RS19755	COG1690	Belongs to the RtcB family
CI789_RS19765	COG4650	regulator
CI789_RS19770	COG1234	tRNA 3'-trailer cleavage
CI789_RS19775	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CI789_RS19790	COG0742	ribosomal rna small subunit methyltransferase
CI789_RS19795	COG0589	response to stress
CI789_RS19805	COG0306	phosphate transporter
CI789_RS19810	COG2081	HI0933 family
CI789_RS19825	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CI789_RS19830	COG1309	transcriptional regulator
CI789_RS19840	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CI789_RS19845	COG2203	Gaf domain
CI789_RS19845	COG2199	diguanylate cyclase activity
CI789_RS19850	COG4773	Receptor
CI789_RS19855	COG1064	alcohol dehydrogenase
CI789_RS19865	COG2200	EAL domain
CI789_RS19880	COG2271	Major facilitator Superfamily
CI789_RS19885	COG2186	Transcriptional regulator
CI789_RS19890	COG0628	permease
CI789_RS19900	COG1840	ABC-type Fe3 transport system, periplasmic component
CI789_RS19905	COG3842	ATPase activity
CI789_RS19930	COG3718	enzyme involved in inositol metabolism
CI789_RS19940	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CI789_RS19945	COG3962	Belongs to the TPP enzyme family
CI789_RS19955	COG0673	inositol 2-dehydrogenase activity
CI789_RS19960	COG1082	Xylose isomerase domain protein TIM barrel
CI789_RS19965	COG1082	Xylose isomerase domain protein TIM barrel
CI789_RS19975	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CI789_RS19980	COG0425	Belongs to the sulfur carrier protein TusA family
CI789_RS19990	COG3714	YhhN family
CI789_RS20000	COG3776	membrane
CI789_RS20005	COG0742	ribosomal rna small subunit methyltransferase
CI789_RS20010	COG0552	protein localization to endoplasmic reticulum
CI789_RS20010	COG0552	protein localization to endoplasmic reticulum
CI789_RS20015	COG2884	Cell division ATP-binding protein ftsE
CI789_RS20020	COG2177	Part of the ABC transporter FtsEX involved in
CI789_RS20045	COG0456	acetyltransferase
CI789_RS20060	COG4177	L-phenylalanine transmembrane transporter activity
CI789_RS20065	COG0411	ABC transporter
CI789_RS20085	COG0395	ABC-type sugar transport system, permease component
CI789_RS20095	COG0584	glycerophosphoryl diester phosphodiesterase
CI789_RS20105	COG0405	Gamma-glutamyltransferase
CI789_RS20115	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS20125	COG1247	-acetyltransferase
CI789_RS20135	COG1741	Belongs to the pirin family
CI789_RS20140	COG1609	Transcriptional regulator
CI789_RS20145	COG3265	gluconokinase activity
CI789_RS20150	COG2610	gluconate transmembrane transporter activity
CI789_RS20155	COG2095	MarC family integral membrane protein
CI789_RS20170	COG1523	belongs to the glycosyl hydrolase 13 family
CI789_RS20180	COG0297	glycogen (starch) synthase activity
CI789_RS20185	COG0058	SHG alpha-glucan phosphorylase activity
CI789_RS20190	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CI789_RS20195	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CI789_RS20200	COG0705	Rhomboid family
CI789_RS20205	COG1349	DNA-binding transcription factor activity
CI789_RS20215	COG0058	SHG alpha-glucan phosphorylase activity
CI789_RS20220	COG1640	4-alpha-glucanotransferase
CI789_RS20225	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CI789_RS20230	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CI789_RS20230	COG0316	Belongs to the HesB IscA family
CI789_RS20250	COG0366	Alpha amylase catalytic
CI789_RS20260	COG1918	ferrous iron import across plasma membrane
CI789_RS20265	COG2183	response to ionizing radiation
CI789_RS20270	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CI789_RS20285	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CI789_RS20290	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CI789_RS20295	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CI789_RS20305	COG0494	nUDIX hydrolase
CI789_RS20310	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CI789_RS20335	COG4796	Type ii and iii secretion system protein
CI789_RS20340	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CI789_RS20345	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CI789_RS20360	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CI789_RS20380	COG0402	S-adenosylhomocysteine deaminase activity
CI789_RS20385	COG0738	Major facilitator superfamily
CI789_RS20395	COG0512	Glutamine amidotransferase of anthranilate synthase
CI789_RS20400	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CI789_RS20405	COG1289	transmembrane transporter activity
CI789_RS20415	COG1765	OsmC-like protein
CI789_RS20425	COG3954	Phosphoribulokinase
CI789_RS20430	COG3089	Belongs to the UPF0270 family
CI789_RS20435	COG0429	hydrolase of the alpha beta-hydrolase fold
CI789_RS20445	COG4521	taurine ABC transporter
CI789_RS20455	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CI789_RS20460	COG2175	clavaminate synthase activity
CI789_RS20470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CI789_RS20480	COG0488	(ABC) transporter
CI789_RS20485	COG2249	NAD(P)H dehydrogenase (quinone) activity
CI789_RS20490	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CI789_RS20490	COG0475	glutathione-regulated potassium exporter activity
CI789_RS20495	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CI789_RS20500	COG1047	Peptidyl-prolyl cis-trans
CI789_RS20505	COG2900	Belongs to the SlyX family
CI789_RS20510	COG0545	Peptidyl-prolyl cis-trans isomerase
CI789_RS20515	COG2964	Protein conserved in bacteria
CI789_RS20520	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CI789_RS20525	COG2923	Belongs to the DsrF TusC family
CI789_RS20530	COG2168	tRNA wobble position uridine thiolation
CI789_RS20535	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CI789_RS20540	COG0049	tRNA binding
CI789_RS20545	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CI789_RS20550	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CI789_RS20555	COG0051	transcription antitermination factor activity, RNA binding
CI789_RS20560	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CI789_RS20565	COG0088	Forms part of the polypeptide exit tunnel
CI789_RS20570	COG0089	rRNA binding
CI789_RS20575	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CI789_RS20580	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CI789_RS20585	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CI789_RS20595	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CI789_RS20600	COG0255	Belongs to the universal ribosomal protein uL29 family
CI789_RS20610	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CI789_RS20615	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CI789_RS20620	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CI789_RS20625	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CI789_RS20630	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CI789_RS20635	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CI789_RS20640	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CI789_RS20650	COG1841	ribosomal large subunit assembly
CI789_RS20655	COG0200	Binds to the 23S rRNA
CI789_RS20660	COG0201	protein transport
CI789_RS20665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CI789_RS20670	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CI789_RS20675	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CI789_RS20680	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CI789_RS20685	COG0202	RNA polymerase activity
CI789_RS20690	COG0203	ribosomal protein L17
CI789_RS20700	COG0789	Transcriptional regulator
CI789_RS20705	COG3036	rescue of stalled ribosome
CI789_RS20710	COG1970	mechanosensitive ion channel activity
CI789_RS20720	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CI789_RS20720	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CI789_RS20725	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CI789_RS20730	COG0242	peptide deformylase activity
CI789_RS20735	COG0758	DNA mediated transformation
CI789_RS20745	COG0551	DNA topoisomerase type I activity
CI789_RS20750	COG0009	L-threonylcarbamoyladenylate synthase
CI789_RS20755	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CI789_RS20765	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CI789_RS20805	COG1126	abc transporter atp-binding protein
CI789_RS20810	COG0765	amino acid transport
CI789_RS20815	COG4597	amino acid ABC transporter
CI789_RS20820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CI789_RS20825	COG1560	Kdo2-lipid A biosynthetic process
CI789_RS20840	COG2264	protein methyltransferase activity
CI789_RS20845	COG4145	pantothenate transmembrane transporter activity
CI789_RS20850	COG3924	membrane
CI789_RS20855	COG0439	Biotin carboxylase
CI789_RS20860	COG0511	ligase activity, forming carbon-carbon bonds
CI789_RS20865	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CI789_RS20870	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CI789_RS20875	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CI789_RS20880	COG0604	alcohol dehydrogenase
CI789_RS20885	COG2200	EAL domain
CI789_RS20885	COG2199	diguanylate cyclase activity
CI789_RS20895	COG1077	Cell shape determining protein MreB Mrl
CI789_RS20900	COG1792	Involved in formation and maintenance of cell shape
CI789_RS20905	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CI789_RS20915	COG1530	ribonuclease E activity
CI789_RS20920	COG3164	Protein of unknown function
CI789_RS20925	COG0312	modulator of DNA gyrase
CI789_RS20930	COG0583	DNA-binding transcription factor activity
CI789_RS20940	COG1566	PFAM secretion protein HlyD family protein
CI789_RS20945	COG1289	transmembrane transporter activity
CI789_RS20955	COG2732	(Barnase) inhibitor
CI789_RS20975	COG1438	arginine binding
CI789_RS20980	COG0039	L-malate dehydrogenase activity
CI789_RS20985	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CI789_RS20990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CI789_RS20995	COG3105	Protein conserved in bacteria
CI789_RS21000	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CI789_RS21010	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CI789_RS21015	COG0625	glutathione transferase activity
CI789_RS21020	COG2969	positive regulation of protein catabolic process
CI789_RS21025	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CI789_RS21030	COG0070	glutamate synthase
CI789_RS21030	COG0069	glutamate synthase activity
CI789_RS21030	COG0067	glutamate synthase
CI789_RS21035	COG0784	Response regulator, receiver
CI789_RS21035	COG2198	Histidine kinase
CI789_RS21035	COG5002	protein histidine kinase activity
CI789_RS21045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS21060	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CI789_RS21065	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CI789_RS21070	COG1137	ATPase activity
CI789_RS21075	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CI789_RS21080	COG3117	lipopolysaccharide transmembrane transporter activity
CI789_RS21085	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CI789_RS21095	COG0530	calcium, potassium:sodium antiporter activity
CI789_RS21100	COG1127	ABC transporter
CI789_RS21105	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CI789_RS21115	COG2854	intermembrane phospholipid transfer
CI789_RS21120	COG3113	response to antibiotic
CI789_RS21125	COG5007	Belongs to the BolA IbaG family
CI789_RS21130	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CI789_RS21135	COG3423	Transcriptional regulator
CI789_RS21140	COG0142	geranyltranstransferase activity
CI789_RS21145	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CI789_RS21150	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CI789_RS21155	COG0697	spore germination
CI789_RS21160	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CI789_RS21170	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS21175	COG3433	isochorismatase activity
CI789_RS21175	COG1535	isochorismatase
CI789_RS21180	COG1021	2,3-dihydroxybenzoate-AMP ligase
CI789_RS21185	COG1169	isochorismate synthase
CI789_RS21190	COG0642	Histidine kinase
CI789_RS21195	COG0745	RESPONSE REGULATOR receiver
CI789_RS21200	COG2027	D-alanyl-D-alanine carboxypeptidase
CI789_RS21210	COG1534	Rna-binding protein
CI789_RS21215	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CI789_RS21225	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CI789_RS21230	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CI789_RS21235	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CI789_RS21250	COG0779	Required for maturation of 30S ribosomal subunits
CI789_RS21265	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CI789_RS21270	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CI789_RS21275	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CI789_RS21280	COG1185	polyribonucleotide nucleotidyltransferase activity
CI789_RS21295	COG0513	Belongs to the DEAD box helicase family
CI789_RS21305	COG0826	peptidase U32
CI789_RS21310	COG0826	peptidase U32
CI789_RS21315	COG3154	lipid carrier protein
CI789_RS21320	COG3153	acetyltransferase
CI789_RS21325	COG2827	Endonuclease containing a URI domain
CI789_RS21330	COG0693	protein deglycase activity
CI789_RS21335	COG3766	membrane
CI789_RS21345	COG0754	glutathionylspermidine amidase activity
CI789_RS21350	COG0602	queuosine metabolic process
CI789_RS21360	COG0477	Major facilitator Superfamily
CI789_RS21365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CI789_RS21370	COG0366	Alpha amylase catalytic
CI789_RS21385	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
CI789_RS21390	COG0540	Belongs to the ATCase OTCase family
CI789_RS21395	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CI789_RS21400	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CI789_RS21415	COG4269	membrane
CI789_RS21430	COG2927	DNA polymerase III (CHI subunit)
CI789_RS21435	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CI789_RS21440	COG0795	lipopolysaccharide-transporting ATPase activity
CI789_RS21445	COG0795	lipopolysaccharide-transporting ATPase activity
CI789_RS21450	COG2733	membrane
CI789_RS21455	COG0433	COG0433 Predicted ATPase
CI789_RS21480	COG0582	viral genome integration into host DNA
CI789_RS21500	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CI789_RS21545	COG3775	system Galactitol-specific IIC component
CI789_RS21550	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CI789_RS21555	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS21605	COG0789	Transcriptional regulator
CI789_RS21635	COG2909	trisaccharide binding
CI789_RS21640	COG0058	SHG alpha-glucan phosphorylase activity
CI789_RS21645	COG1640	4-alpha-glucanotransferase
CI789_RS21650	COG3833	ABC-type maltose transport systems, permease component
CI789_RS21655	COG1175	transmembrane transport
CI789_RS21660	COG2182	Extracellular solute-binding protein
CI789_RS21670	COG4580	involved in the transport of maltose and maltodextrins
CI789_RS21680	COG0456	acetyltransferase
CI789_RS21685	COG3318	Belongs to the UPF0149 family
CI789_RS21685	COG3012	SEC-C Motif Domain Protein
CI789_RS21690	COG1464	Belongs to the NlpA lipoprotein family
CI789_RS21700	COG3423	Transcriptional regulator
CI789_RS21705	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CI789_RS21725	COG1942	4-Oxalocrotonate Tautomerase
CI789_RS21735	COG0840	transmembrane signaling receptor activity
CI789_RS21740	COG0473	3-isopropylmalate dehydrogenase activity
CI789_RS21755	COG0358	DNA primase activity
CI789_RS21760	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CI789_RS21765	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CI789_RS21770	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CI789_RS21775	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CI789_RS21780	COG1968	undecaprenyl-diphosphatase activity
CI789_RS21785	COG0617	tRNA 3'-terminal CCA addition
CI789_RS21790	COG4991	sh3 domain protein
CI789_RS21795	COG3025	triphosphatase activity
CI789_RS21805	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CI789_RS21805	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CI789_RS21815	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CI789_RS21820	COG3384	dioxygenase
CI789_RS21825	COG0754	glutathionylspermidine amidase activity
CI789_RS21830	COG5463	Belongs to the UPF0441 family
CI789_RS21835	COG1538	Outer membrane efflux protein
CI789_RS21840	COG0494	nUDIX hydrolase
CI789_RS21845	COG3151	Protein conserved in bacteria
CI789_RS21850	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CI789_RS21855	COG3150	esterase
CI789_RS21860	COG0187	DNA topoisomerase II activity
CI789_RS21870	COG0583	DNA-binding transcription factor activity
CI789_RS21875	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CI789_RS21880	COG2249	NAD(P)H dehydrogenase (quinone) activity
CI789_RS21890	COG0191	fructose-bisphosphate aldolase activity
CI789_RS21900	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS21900	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS21905	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS21910	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS21910	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CI789_RS21910	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS21915	COG3711	transcriptional antiterminator
CI789_RS21930	COG2132	Multicopper oxidase
CI789_RS21935	COG0656	L-ascorbic acid biosynthetic process
CI789_RS21940	COG1979	alcohol dehydrogenase
CI789_RS21945	COG2207	Transcriptional regulator
CI789_RS21950	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CI789_RS21955	COG0076	glutamate decarboxylase activity
CI789_RS21960	COG0586	Pfam SNARE associated Golgi protein
CI789_RS21975	COG0848	biopolymer transport protein
CI789_RS21985	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS22045	COG4297	protein containing double-stranded beta helix domain
CI789_RS22050	COG2308	Evidence 4 Homologs of previously reported genes of
CI789_RS22100	COG0679	Auxin Efflux Carrier
CI789_RS22110	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CI789_RS22125	COG3842	ATPase activity
CI789_RS22135	COG1178	ABC-type Fe3 transport system permease component
CI789_RS22145	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CI789_RS22150	COG1473	amidohydrolase
CI789_RS22155	COG1473	amidohydrolase
CI789_RS22160	COG0583	DNA-binding transcription factor activity
CI789_RS22195	COG1528	Iron-storage protein
CI789_RS22205	COG3684	Belongs to the aldolase LacD family
CI789_RS22215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CI789_RS22225	COG3037	sugar-specific permease SgaT UlaA
CI789_RS22235	COG2723	6-phospho-beta-galactosidase activity
CI789_RS22240	COG2723	6-phospho-beta-galactosidase activity
CI789_RS22245	COG1447	Phosphotransferase system cellobiose-specific component IIA
CI789_RS22250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CI789_RS22260	COG1609	Transcriptional regulator
CI789_RS22265	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CI789_RS22285	COG0840	transmembrane signaling receptor activity
CI789_RS22295	COG5001	Diguanylate cyclase
CI789_RS22300	COG1522	sequence-specific DNA binding
CI789_RS22315	COG1120	ATPase activity
CI789_RS22320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS22325	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS22330	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CI789_RS22335	COG4772	TonB-dependent receptor
CI789_RS22340	COG3712	iron ion homeostasis
CI789_RS22345	COG1595	DNA-templated transcription, initiation
CI789_RS22355	COG2186	Transcriptional regulator
CI789_RS22370	COG4607	ABC-type enterochelin transport system periplasmic component
CI789_RS22375	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CI789_RS22380	COG4605	iron ion homeostasis
CI789_RS22385	COG4604	ABC transporter, ATP-binding protein
CI789_RS22405	COG1940	carbohydrate kinase activity
CI789_RS22430	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CI789_RS22435	COG4139	cobalamin transport
CI789_RS22455	COG0523	cobalamin synthesis protein
CI789_RS22460	COG2879	small protein
CI789_RS22465	COG1966	Carbon starvation protein
CI789_RS22485	COG3300	MHYT domain
CI789_RS22485	COG5001	Diguanylate cyclase
CI789_RS22510	COG2814	Major facilitator Superfamily
CI789_RS22515	COG0840	transmembrane signaling receptor activity
CI789_RS22550	COG1982	Orn Lys Arg decarboxylase major
CI789_RS22560	COG5441	Belongs to the UPF0261 family
CI789_RS22565	COG5564	TIM-barrel signal transduction protein
CI789_RS22570	COG0741	lytic transglycosylase activity
CI789_RS22575	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CI789_RS22580	COG1194	a g-specific adenine glycosylase
CI789_RS22590	COG3171	Protein conserved in bacteria
CI789_RS22600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CI789_RS22605	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CI789_RS22615	COG0762	integral membrane protein
CI789_RS22620	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CI789_RS22625	COG2805	Type II/IV secretion system protein
CI789_RS22630	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CI789_RS22635	COG1678	Uncharacterized ACR, COG1678
CI789_RS22645	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CI789_RS22675	COG0431	NADPH-dependent FMN reductase
CI789_RS22680	COG1393	Belongs to the ArsC family
CI789_RS22685	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CI789_RS22710	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS22715	COG2207	Transcriptional regulator
CI789_RS22725	COG0667	Aldo Keto reductase
CI789_RS22735	COG0840	transmembrane signaling receptor activity
CI789_RS22745	COG2135	peptidase activity
CI789_RS22760	COG1881	PFAM PEBP family protein
CI789_RS22765	COG2207	Transcriptional regulator
CI789_RS22770	COG0179	Fumarylacetoacetate (FAA) hydrolase
CI789_RS22825	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CI789_RS22840	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CI789_RS22850	COG1902	pentaerythritol trinitrate reductase activity
CI789_RS22860	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS22865	COG1070	Carbohydrate kinase
CI789_RS22870	COG1172	Belongs to the binding-protein-dependent transport system permease family
CI789_RS22875	COG1879	ABC-type sugar transport system periplasmic component
CI789_RS22880	COG1129	ABC transporter
CI789_RS22890	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CI789_RS22895	COG1028	Short-chain dehydrogenase reductase Sdr
CI789_RS22900	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CI789_RS22905	COG3775	system Galactitol-specific IIC component
CI789_RS22910	COG3414	Phosphotransferase system galactitol-specific IIB component
CI789_RS22985	COG0640	Transcriptional regulator
CI789_RS22990	COG0477	Major facilitator Superfamily
CI789_RS23010	COG3093	addiction module antidote protein HigA
CI789_RS23095	COG1227	inorganic diphosphatase activity
CI789_RS23105	COG0148	phosphopyruvate hydratase activity
CI789_RS23110	COG0588	phosphoglycerate mutase activity
CI789_RS23115	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CI789_RS23120	COG0346	lactoylglutathione lyase activity
CI789_RS23455	COG0371	Dehydrogenase
CI789_RS23470	COG0523	cobalamin synthesis protein
CI789_RS23475	COG0443	Heat shock 70 kDa protein
CI789_RS23480	COG2214	Heat shock protein DnaJ domain protein
CI789_RS23505	COG0024	Methionine aminopeptidase
CI789_RS23530	COG0601	transmembrane transport
CI789_RS23545	COG2814	Major facilitator Superfamily
CI789_RS23555	COG2916	Histone family protein nucleoid-structuring protein H-NS
CI789_RS23570	COG2814	Major facilitator Superfamily
CI789_RS23575	COG0583	DNA-binding transcription factor activity
CI789_RS23590	COG2223	nitrite transmembrane transporter activity
CI789_RS23595	COG1584	GPR1 FUN34 yaaH family protein
CI789_RS23605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CI789_RS23615	COG0436	Aminotransferase
CI789_RS23620	COG0697	spore germination
CI789_RS23625	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CI789_RS23650	COG0523	cobalamin synthesis protein
CI789_RS23660	COG4628	conserved protein (DUF2132)
CI789_RS23690	COG1595	DNA-templated transcription, initiation
CI789_RS23695	COG4232	protein-disulfide reductase activity
CI789_RS23715	COG1309	transcriptional regulator
CI789_RS23740	COG3729	General stress protein
CI789_RS23765	COG3685	Protein conserved in bacteria
CI789_RS23770	COG3685	Protein conserved in bacteria
CI789_RS23775	COG3546	catalase activity
CI789_RS23790	COG5001	Diguanylate cyclase
CI789_RS23810	COG2223	nitrite transmembrane transporter activity
CI789_RS23820	COG1063	alcohol dehydrogenase
CI789_RS23825	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CI789_RS23830	COG0640	Transcriptional regulator
CI789_RS23845	COG0110	maltose O-acetyltransferase activity
CI789_RS23885	COG3121	Chaperone
CI789_RS23890	COG3188	usher protein
CI789_RS23905	COG0745	RESPONSE REGULATOR receiver
CI789_RS23920	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS23925	COG0583	DNA-binding transcription factor activity
CI789_RS23930	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CI789_RS23935	COG2368	4-hydroxyphenylacetate
CI789_RS23955	COG3971	2-oxopent-4-enoate hydratase activity
CI789_RS23965	COG3384	dioxygenase
CI789_RS23970	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS23975	COG0179	Fumarylacetoacetate (FAA) hydrolase
CI789_RS23980	COG1846	Transcriptional regulator
CI789_RS24000	COG1012	belongs to the aldehyde dehydrogenase family
CI789_RS24005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CI789_RS24020	COG1309	transcriptional regulator
CI789_RS24025	COG1464	Belongs to the NlpA lipoprotein family
CI789_RS24030	COG2011	ABC-type metal ion transport system permease component
CI789_RS24045	COG1126	abc transporter atp-binding protein
CI789_RS24050	COG0765	amino acid transport
CI789_RS24060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CI789_RS24065	COG2079	MmgE PrpD family protein
CI789_RS24070	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CI789_RS24085	COG1192	Involved in chromosome partitioning